BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018049
(361 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224141083|ref|XP_002323904.1| predicted protein [Populus trichocarpa]
gi|222866906|gb|EEF04037.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 206/362 (56%), Positives = 266/362 (73%), Gaps = 7/362 (1%)
Query: 1 MSDGGGESGSKHQQP----HTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLA 56
MS GGGESG H + K + SGD+F++AIAK+AVAQ+CE VGFQ+FQQSAL KL+
Sbjct: 1 MSHGGGESGRLHDKAGDSGKRKSRVSGDEFTRAIAKIAVAQMCETVGFQSFQQSALEKLS 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
D+ YI ++GK A FYANL+GR EGNVFD+ QG+E+LGL QGF+GAS+++HCLASSGIV
Sbjct: 61 DVTTWYIRNLGKTAQFYANLAGRTEGNVFDVIQGMEELGLSQGFAGASNVDHCLASSGIV 120
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYF 176
RE++QY +A D+PF Y+IP FPV ++RKP SF QI EE P E IPAWLPAFPDPQT+
Sbjct: 121 REIVQYIGDAEDIPFVYSIPPFPVARERKPVPSFFQICEESPAEHIPAWLPAFPDPQTHV 180
Query: 177 ESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFS---ESGPSSFVHGDSSKEKKTV 233
+ P+ NE + +KIE + KM+MS +NL + F+ GPSS G+S++ +
Sbjct: 181 QLPAGNEGDAVFNADKIEPARHHLKMDMSSMNLPQHFTCNGSGGPSSVTFGNSARATQGT 240
Query: 234 ESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMK 293
ESNPFL+APL F EKEVS +V PA+LS E A++ PV + ++DNHISV+ETFAPA+EAMK
Sbjct: 241 ESNPFLAAPLQFGEKEVSHLVPPARLSDEAAVRYPVEQNRIMDNHISVLETFAPAIEAMK 300
Query: 294 NRFCESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDE 353
+RFC+S E QK + L+QRP VQFKI VGK SL SPQ + KI WF K++END+
Sbjct: 301 SRFCDSEEGQKKVLLNQRPAVQFKIQVGKNSLAGAPDLSPQKIGIEKISKWFGKDSENDD 360
Query: 354 RK 355
+K
Sbjct: 361 KK 362
>gi|225451729|ref|XP_002277032.1| PREDICTED: uncharacterized protein LOC100246447 [Vitis vinifera]
Length = 377
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/358 (58%), Positives = 257/358 (71%), Gaps = 4/358 (1%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MSDGGGESG + + TKRK S DF QAIAK+AVAQICE GFQ FQQSAL L+++ V
Sbjct: 1 MSDGGGESGRESDRA-TKRKSSDRDFPQAIAKIAVAQICESAGFQGFQQSALETLSEVVV 59
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
RYI +GK A+ YAN + R E N+FDI QGLEDL QGFSGASD +HCLA SG VRE++
Sbjct: 60 RYIRELGKTAHTYANSACRTECNIFDIIQGLEDLASLQGFSGASDSDHCLAGSGTVREIV 119
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPS 180
QY +EA ++PFA+++PHFPV++DRK SFLQIGEEPP + IP WLPAFPDPQTY SP
Sbjct: 120 QYVSEAEEIPFAHSVPHFPVIRDRKQTPSFLQIGEEPPGDHIPDWLPAFPDPQTYVHSPV 179
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES---GPSSFVHGDSSKEKKTVESNP 237
NER +D IE +Q +K E S++NLQ+Q + + GPS GD++K ++ E+NP
Sbjct: 180 LNERGADPCAGNIEQARQHKKAEWSLLNLQQQLACNGLEGPSMIDPGDAAKARRAAETNP 239
Query: 238 FLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFC 297
FLSAPLHF EK VS V LPAKLS E ++N + H V NH+SV+ETFAPA+E MK+R C
Sbjct: 240 FLSAPLHFGEKGVSPVFLPAKLSNEAVVENQAGENHAVANHVSVLETFAPAIELMKSRSC 299
Query: 298 ESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
ES E +K + +QRP VQFKI +GKKS L S QN D KI WF K+NE D++K
Sbjct: 300 ESEEGRKKVLSNQRPAVQFKIEIGKKSTGTALDLSFQNKDVEKITSWFGKDNEKDDKK 357
>gi|224077734|ref|XP_002305385.1| predicted protein [Populus trichocarpa]
gi|222848349|gb|EEE85896.1| predicted protein [Populus trichocarpa]
Length = 394
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/359 (57%), Positives = 259/359 (72%), Gaps = 7/359 (1%)
Query: 4 GGGESGSKHQQ----PHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIA 59
GGGESG H++ K + SGD+F++AI K+AVAQ+CE +GFQ+FQQSAL L D+
Sbjct: 16 GGGESGRLHEKVGHNGKRKSRASGDEFARAIGKIAVAQMCESMGFQSFQQSALETLTDVT 75
Query: 60 VRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVREL 119
YI ++GKAA ANL+GR EGNVFD+ QGLE+LGL QGF+GASD++HCLASSGIVRE+
Sbjct: 76 TWYIRNIGKAAQLCANLAGRTEGNVFDVIQGLEELGLPQGFAGASDVDHCLASSGIVREI 135
Query: 120 IQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESP 179
QY +A D+PFAY+IP FPV ++RKP SF QIGEEPP E IPAWLPAFPDPQTY + P
Sbjct: 136 AQYIGDADDIPFAYSIPPFPVARERKPAPSFSQIGEEPPEEHIPAWLPAFPDPQTYAQLP 195
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFS---ESGPSSFVHGDSSKEKKTVESN 236
NE +D + IE +Q +KM++S +NL +QF+ GPSS GDS+K + SN
Sbjct: 196 EGNEGRADLNADNIESVRQHQKMDVSYMNLPQQFNCNGSEGPSSVAFGDSAKATQRTVSN 255
Query: 237 PFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRF 296
PFL+APL F KEVS VV PAKLS E A++ PV + +DN++SVM+TFAPA+EAMK+R
Sbjct: 256 PFLAAPLQFGVKEVSHVVPPAKLSDEAAVRYPVEQTRTMDNNMSVMKTFAPAIEAMKSRL 315
Query: 297 CESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
C+S E QK + +QRP VQFKIGVGK SL S QN KI W K++END++K
Sbjct: 316 CDSGEGQKKVFFNQRPAVQFKIGVGKNSLDGAPDLSLQNKGIKKISMWSGKDSENDDQK 374
>gi|147864648|emb|CAN79809.1| hypothetical protein VITISV_014912 [Vitis vinifera]
Length = 366
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/358 (56%), Positives = 253/358 (70%), Gaps = 15/358 (4%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MSDGGGESG + + TKRK S DF QAIAK+AVAQICE GFQ FQQSAL L+++ V
Sbjct: 1 MSDGGGESGRESDRA-TKRKSSDRDFPQAIAKIAVAQICESAGFQGFQQSALETLSEVVV 59
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
RYI +GK A+ YAN + R E N+FDI QGLEDL QGFSGASD +HCLA SG VRE++
Sbjct: 60 RYIRELGKTAHTYANSACRTECNIFDIIQGLEDLASLQGFSGASDSDHCLAGSGTVREIV 119
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPS 180
QY +EA ++PFA+++PHFPV++DRK SFLQIGEEPP + IP WLPAFPDPQTY SP
Sbjct: 120 QYVSEAEEIPFAHSVPHFPVIRDRKQTPSFLQIGEEPPGDHIPDWLPAFPDPQTYVHSPV 179
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES---GPSSFVHGDSSKEKKTVESNP 237
E+A +Q +K E S++NLQ+Q + + GPS GD++K ++ E+NP
Sbjct: 180 TLEQA-----------RQHKKAEWSLLNLQQQLACNGLEGPSMIDPGDAAKARRAAETNP 228
Query: 238 FLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFC 297
FLSAPLHF EK VS V LPAKLS E ++N + H V NH+SV+ETFAPA+E MK+R C
Sbjct: 229 FLSAPLHFGEKGVSPVFLPAKLSNEAVVENQAGENHAVANHVSVLETFAPAIELMKSRSC 288
Query: 298 ESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
ES E +K + +QRP VQFKI +GKKS L S QN D KI WF K+NE D++K
Sbjct: 289 ESEEGRKKVLSNQRPAVQFKIEIGKKSTGTALDLSFQNKDVEKITSWFGKDNEKDDKK 346
>gi|296082209|emb|CBI21214.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/358 (55%), Positives = 244/358 (68%), Gaps = 24/358 (6%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MSDGGGESG + + TKRK S DF QAIAK+AVAQICE GFQ FQQSAL L+++ V
Sbjct: 1 MSDGGGESGRESDRA-TKRKSSDRDFPQAIAKIAVAQICESAGFQGFQQSALETLSEVVV 59
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
RYI +GK A+ YAN + R E N+FDI QGLEDL QGFSGASD +HCLA SG VRE++
Sbjct: 60 RYIRELGKTAHTYANSACRTECNIFDIIQGLEDLASLQGFSGASDSDHCLAGSGTVREIV 119
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPS 180
QY +EA ++PFA+++PHFPV++DRK SFLQIGEEPP + IP WLPAFPDPQTY SP
Sbjct: 120 QYVSEAEEIPFAHSVPHFPVIRDRKQTPSFLQIGEEPPGDHIPDWLPAFPDPQTYVHSPV 179
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES---GPSSFVHGDSSKEKKTVESNP 237
NER +D IE +Q +K E S++NLQ+Q + + GPS GD++K ++ E+NP
Sbjct: 180 LNERGADPCAGNIEQARQHKKAEWSLLNLQQQLACNGLEGPSMIDPGDAAKARRAAETNP 239
Query: 238 FLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFC 297
FLSAPLHF EK VS V LPAKLS E TFAPA+E MK+R C
Sbjct: 240 FLSAPLHFGEKGVSPVFLPAKLSNEA--------------------TFAPAIELMKSRSC 279
Query: 298 ESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
ES E +K + +QRP VQFKI +GKKS L S QN D KI WF K+NE D++K
Sbjct: 280 ESEEGRKKVLSNQRPAVQFKIEIGKKSTGTALDLSFQNKDVEKITSWFGKDNEKDDKK 337
>gi|255573410|ref|XP_002527631.1| tbp-associated factor taf, putative [Ricinus communis]
gi|223533005|gb|EEF34770.1| tbp-associated factor taf, putative [Ricinus communis]
Length = 379
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/361 (54%), Positives = 252/361 (69%), Gaps = 8/361 (2%)
Query: 1 MSDGGGESG---SKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLAD 57
MS GGG+SG K Q K SGD+F+++IAK+AVAQICE GFQTFQQSAL L+D
Sbjct: 1 MSHGGGQSGRVQEKSQLAKRKSGSSGDEFARSIAKIAVAQICECTGFQTFQQSALETLSD 60
Query: 58 IAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVR 117
+ VRYI ++GK A AN +GR EGN FDI Q LE+L QGF+ ASD++HC+ASSGIVR
Sbjct: 61 VTVRYICNLGKLAQGNANSAGRIEGNAFDIIQALEELCSSQGFASASDVDHCIASSGIVR 120
Query: 118 ELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFE 177
++ QY ++A DVPFAY+IP FP+V++RK F QIGE+PP E IP WLPAFPDPQ Y +
Sbjct: 121 DIAQYVSDADDVPFAYSIPPFPIVRERKLAPIFSQIGEKPPWEHIPDWLPAFPDPQIYLQ 180
Query: 178 SPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES---GPSSFVHGDSSKEKKTVE 234
SP+ NE A+D +K E + K++ S+ LQ+ F+ S GPSS V + K VE
Sbjct: 181 SPTVNEGATDLNMQKFEPARLHPKIDRSL--LQQPFTSSGSQGPSSNVPAGGYEGKLIVE 238
Query: 235 SNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKN 294
NPF++APL EKEVS VV PAKLS E A++NP+ + DNH+SV+ TFAPA++AM +
Sbjct: 239 GNPFVAAPLQCGEKEVSHVVPPAKLSNETAVRNPIEHNRLADNHVSVLNTFAPAIKAMNS 298
Query: 295 RFCESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDER 354
R C+S E QK + L+QRP +QFKI +GKKSL L+ QN KI PW K+NEND++
Sbjct: 299 RLCDSEEGQKKVLLNQRPAIQFKIAIGKKSLRTSLELGSQNKSAEKISPWSEKDNENDDK 358
Query: 355 K 355
K
Sbjct: 359 K 359
>gi|356568768|ref|XP_003552582.1| PREDICTED: uncharacterized protein LOC100815889 [Glycine max]
Length = 381
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 185/363 (50%), Positives = 251/363 (69%), Gaps = 10/363 (2%)
Query: 1 MSDGGGESGSKHQQPHTKRKF---SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLAD 57
MS+GGG++G + +QP T R+ GDD+++AIAK+AVAQ+CE GFQ FQQSAL L+D
Sbjct: 1 MSNGGGKTGRQLEQPGTWRRRKVGGGDDYARAIAKIAVAQVCEGEGFQAFQQSALEALSD 60
Query: 58 IAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVR 117
+ VRYI +VGK+A+ +ANLSGR E N FD+ QGLED+G QGF+GA+D++HCL SSG++R
Sbjct: 61 VVVRYILNVGKSAHCHANLSGRTECNAFDVIQGLEDMGSVQGFAGAADVDHCLESSGVIR 120
Query: 118 ELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFE 177
E++ + N+A V FA+ IP FPVVK+R P SFLQ GEEPP E IPAWLPAFPDPQTY +
Sbjct: 121 EIVHFVNDAEPVMFAHPIPRFPVVKERVPNPSFLQKGEEPPGEHIPAWLPAFPDPQTYSQ 180
Query: 178 SPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQ-----FSESGPSSFVHGDSSKEKKT 232
SP+ N R ++ K + ++ K E +NLQ+Q F +S +S D+ ++
Sbjct: 181 SPAVNGRGTEPRAVKFDQERESGKGEWPALNLQQQMVSNMFEKS--ASIDPADAKAKRVA 238
Query: 233 VESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAM 292
E NPFL+APL E+KEV+SV PAKL + AL NPV + V + IS +ETFAPA+EAM
Sbjct: 239 AEGNPFLAAPLKIEDKEVASVPPPAKLFNDEALDNPVVENLVENEPISALETFAPAIEAM 298
Query: 293 KNRFCESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENEND 352
K+ C+S+E+Q +++P V+FKIG+ K L K + PQ + K PWF E+E D
Sbjct: 299 KSTICDSKEDQTKFCANEKPTVRFKIGIKNKLLGKSIGLIPQKEEHEKTLPWFAMEDEKD 358
Query: 353 ERK 355
+RK
Sbjct: 359 DRK 361
>gi|356526516|ref|XP_003531863.1| PREDICTED: uncharacterized protein LOC100778210 isoform 1 [Glycine
max]
gi|356526518|ref|XP_003531864.1| PREDICTED: uncharacterized protein LOC100778210 isoform 2 [Glycine
max]
Length = 381
Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 183/361 (50%), Positives = 246/361 (68%), Gaps = 6/361 (1%)
Query: 1 MSDGGGESGSKHQQPHT--KRKFSG-DDFSQAIAKVAVAQICERVGFQTFQQSALGKLAD 57
MS+GGG++G + +QP T +RK G DD+++AIAK+AVAQ+CE GFQ FQQSAL L+D
Sbjct: 1 MSNGGGKTGRQLEQPGTWGRRKVGGGDDYARAIAKIAVAQVCESEGFQAFQQSALEALSD 60
Query: 58 IAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVR 117
+ RYI +VGK+A+ +ANLSGR E + FD+ QGLED+G QGF+GASD++HCL SSG++R
Sbjct: 61 VVARYILNVGKSAHCHANLSGRTECHAFDVIQGLEDMGSVQGFAGASDVDHCLESSGVIR 120
Query: 118 ELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFE 177
E++ + N+A V FA+ IP FPVVK+R P SFLQ GEEPP E IPAWLPAFPD QTY E
Sbjct: 121 EIVHFVNDAEPVMFAHPIPQFPVVKERVPNPSFLQKGEEPPGEHIPAWLPAFPDLQTYSE 180
Query: 178 SPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESG--PSSFVHGDSSKEKKT-VE 234
SP N R ++ K + ++ K E +N Q+Q + S+ + +K K+ E
Sbjct: 181 SPVVNGRGTEPRAVKFDQERENGKGEWPAMNFQQQMVSNMFEKSALIDPADAKAKRVAAE 240
Query: 235 SNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKN 294
NPFL+APL E+KEV+SV PAKL +VAL NPV + V + IS METFAPA+EAMK+
Sbjct: 241 GNPFLAAPLKIEDKEVASVPPPAKLFNDVALDNPVVENFVENEPISAMETFAPAIEAMKS 300
Query: 295 RFCESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDER 354
C+S E+Q + +++P V+FKIG+ K L K + PQ + PWF E+ D+R
Sbjct: 301 TCCDSNEDQTKFRANEKPTVRFKIGIKNKLLGKSIGLIPQKEEHKNTLPWFAMEDGKDDR 360
Query: 355 K 355
K
Sbjct: 361 K 361
>gi|449447663|ref|XP_004141587.1| PREDICTED: uncharacterized protein LOC101215115 [Cucumis sativus]
Length = 376
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 186/360 (51%), Positives = 237/360 (65%), Gaps = 9/360 (2%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MSDGGGESG H++P T++ +DF +A+AK+AVAQICE GFQ FQQSAL LAD+AV
Sbjct: 1 MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
RY+ ++G ANF AN +GR E N+FDI Q LEDLG QGF+GASDI HCLASS V+E
Sbjct: 61 RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFA 120
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPS 180
+Y +A +VPFAY++P FPVVK+RK + SFLQIGEEPP E IP+WLPA PDP+TY ESP
Sbjct: 121 RYVAQAEEVPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGD---SSKEKKTVESNP 237
E + T K E KQ R E S NLQ+ +G D ++ K+ ESNP
Sbjct: 181 VKEEVVEPQTIKTEPEKQCR-TEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 239
Query: 238 FLSAPLHFEEKEVSSVVLPAKL--SKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNR 295
FL+ PL F EKEVSS+VLP K+ + PV + VD H+SV+ETFAPA+E++KN
Sbjct: 240 FLAPPLQFGEKEVSSIVLPDKVLNNSSTEYHVPVMENCQVDTHVSVLETFAPAIESIKNN 299
Query: 296 FCESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
F S E+ L+++ VQFKIG GKK+ ++ N K WF E+E D++K
Sbjct: 300 FHMSEEK---YSLNRKSTVQFKIGTGKKAAGNMIELRALNNGVKKSSSWFVGEDEKDDKK 356
>gi|225440055|ref|XP_002282259.1| PREDICTED: uncharacterized protein LOC100260255 [Vitis vinifera]
Length = 368
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 241/359 (67%), Gaps = 15/359 (4%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MSDGG E ++ + ++ D+F +A++K+AVAQICE VGF+ FQ SAL L++IAV
Sbjct: 1 MSDGG-EDDRRNSDNNAPKRAGPDEFGRAVSKIAVAQICESVGFEGFQDSALQALSNIAV 59
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
RY+ VGK ANF ANL+GR + NVFD+ +GLEDLG +GFSGAS ++ C+ SSG VRE++
Sbjct: 60 RYLCDVGKTANFCANLAGRTQCNVFDVIRGLEDLGSSEGFSGASGVDQCIVSSGTVREIV 119
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPS 180
+Y N A ++PFA +P FPVV++ K SF+Q+GE P + IP WLPAFPD TY ++P
Sbjct: 120 EYVNSAKEIPFAQPVPRFPVVRNCKATPSFVQMGETPVGKHIPPWLPAFPDSHTYIQTPM 179
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQF----SESGPSSFVHGDSSKEKKTVESN 236
NERA+D +K+E +Q+RK E S+++LQ++ S S +S D ++ + E N
Sbjct: 180 WNERATDPRADKLEQARQRRKAERSLLSLQQRLVCNGSASASTSVGRCDDAEASRAAEGN 239
Query: 237 PFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRF 296
P+L++PL F EK+VS+VVLPAKL ++ VVDNH+SV+ETFAPA+EA+KN F
Sbjct: 240 PYLASPLQFGEKDVSTVVLPAKLLDDL----------VVDNHVSVLETFAPAIEAVKNSF 289
Query: 297 CESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
+S E +KN+ ++R V FK+ GKK L + + +N GK+ ++ E D++K
Sbjct: 290 VDSGESEKNVVPEKRSAVHFKLRTGKKILGESVDLRLKNKSVGKVVSLIGRDEERDDKK 348
>gi|449481545|ref|XP_004156214.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Cucumis sativus]
Length = 261
Score = 270 bits (691), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 137/248 (55%), Positives = 170/248 (68%), Gaps = 4/248 (1%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MSDGGGESG H++P T++ +DF +A+AK+AVAQICE GFQ FQQSAL LAD+AV
Sbjct: 1 MSDGGGESGKVHERPKTRKNLGSEDFPRALAKIAVAQICESEGFQIFQQSALETLADVAV 60
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
RY+ ++G ANF AN +GR E N+FDI Q LEDLG QGF+GASDI HCLASS V+E
Sbjct: 61 RYVQNMGSTANFCANFAGRTECNLFDIIQALEDLGSVQGFAGASDIEHCLASSSTVKEFA 120
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPS 180
+Y +A +VPFAY++P FPVVK+RK + SFLQIGEEPP E IP+WLPA PDP+TY ESP
Sbjct: 121 RYVAQAEEVPFAYSVPKFPVVKERKLRPSFLQIGEEPPGEHIPSWLPALPDPETYIESPI 180
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGD---SSKEKKTVESNP 237
E + T K E KQ R E S NLQ+ +G D ++ K+ ESNP
Sbjct: 181 VKEEVVEPQTIKTEPEKQCR-TEKSFWNLQQWLFCNGLEGSQREDPRNAAMTKQIQESNP 239
Query: 238 FLSAPLHF 245
FL+ P +
Sbjct: 240 FLAPPCNL 247
>gi|15232853|ref|NP_186865.1| Bromodomain transcription factor [Arabidopsis thaliana]
gi|6041801|gb|AAF02121.1|AC009755_14 unknown protein [Arabidopsis thaliana]
gi|6513918|gb|AAF14822.1|AC011664_4 unknown protein [Arabidopsis thaliana]
gi|53749144|gb|AAU90057.1| At3g02160 [Arabidopsis thaliana]
gi|55167884|gb|AAV43774.1| At3g02160 [Arabidopsis thaliana]
gi|110740900|dbj|BAE98546.1| hypothetical protein [Arabidopsis thaliana]
gi|332640250|gb|AEE73771.1| Bromodomain transcription factor [Arabidopsis thaliana]
Length = 397
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/377 (41%), Positives = 219/377 (58%), Gaps = 28/377 (7%)
Query: 1 MSDGGGESGSKHQQPHTKRK-FSGDDFSQAIAKVAVAQICERV--------------GFQ 45
M++G GE GS+ ++ H KRK F G+DF+ +IA++AVAQICE V F
Sbjct: 17 MNNGVGEGGSQQRELHGKRKLFRGNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFS 76
Query: 46 TFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASD 105
+FQ+SAL L D+AV+YI S+GK A+ YANL+GR +GN DI Q LEDLG GF+G SD
Sbjct: 77 SFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSD 136
Query: 106 INHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAW 165
+HCLA SG+V+++I+Y EA ++PF Y++P FP K++KP SF ++G EPP E IP W
Sbjct: 137 TDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVW 196
Query: 166 LPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGD 225
LPAFP+ + S N + E G M++S R E SS G+
Sbjct: 197 LPAFPETELCDRSEETNAATIEGEIPSKENGSSLPSMQLSFDGGGRL--EIHKSSKDVGE 254
Query: 226 SSKEKKTVESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDN-HISVMET 284
S+ + VE N FL+APL F EK VS VV P +LS EV N V KHV +N HI ++E
Sbjct: 255 ST--EAVVEGNLFLTAPLRFVEKNVSPVVRPLELSNEVVRTNHVPDKHVRNNHHIPILEA 312
Query: 285 FAPALEA-MKNRFCESRE-EQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKID 342
AP+ + KN S++ E+ ++ + V+FKIG K+S+ S Q +
Sbjct: 313 SAPSDKINNKNWLAISKDVEKVDVARKELTLVRFKIGTTKRSMCLAKNRSFQE------E 366
Query: 343 PWFCKENENDERKGDLK 359
WF + + E+ ++K
Sbjct: 367 GWFQEGEDKREKTSEIK 383
>gi|255556950|ref|XP_002519508.1| conserved hypothetical protein [Ricinus communis]
gi|223541371|gb|EEF42922.1| conserved hypothetical protein [Ricinus communis]
Length = 356
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 210/360 (58%), Gaps = 29/360 (8%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MS+G ES S ++ DDF +A++++AVAQICE VGF ++SAL L ++A+
Sbjct: 1 MSNGDEESTSARRK--------ADDFGRAVSRMAVAQICESVGFHGCKESALDSLTEVAI 52
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
RYI +GK AN +ANLSGR + N+FDI +G ED+G GFSGAS+ +C+ SG V+E+I
Sbjct: 53 RYIIDLGKIANSHANLSGRTQCNLFDIVRGFEDVGAPLGFSGASNSGNCVVCSGTVKEII 112
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPS 180
++ ++PFA +P FPVV+D++ SFL +GE PP + IPAWLPA PDP TY +P
Sbjct: 113 EFVESTEEIPFAQPVPPFPVVRDKRLIPSFLNMGEIPPGKHIPAWLPALPDPHTYVHTPM 172
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESG----PSSFVHGDSSKEKKTVESN 236
NER D EKIE +Q+RK E ++++LQ++ +G +S +E ESN
Sbjct: 173 WNERVVDPRAEKIEQARQRRKAERALLSLQQRLLSNGSAGASTSVASNHYVQELGVGESN 232
Query: 237 PFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMK-NR 295
FL+ PL EK VS+VV+P KL V L ++ F PA+EA K
Sbjct: 233 RFLARPLKPGEKAVSTVVVPDKLKTSVPL----------------IKAFEPAIEAAKGGG 276
Query: 296 FCESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
F + E ++ + ++RP V FK GKK L +PL S GG W +E D++K
Sbjct: 277 FADDEESERKLLPEKRPAVNFKFKTGKKMLGEPLDLSLSRKSGGTAGHWLGPVDERDDKK 336
>gi|297828658|ref|XP_002882211.1| hypothetical protein ARALYDRAFT_477446 [Arabidopsis lyrata subsp.
lyrata]
gi|297328051|gb|EFH58470.1| hypothetical protein ARALYDRAFT_477446 [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/380 (39%), Positives = 218/380 (57%), Gaps = 35/380 (9%)
Query: 1 MSDGGGESGSKHQQPHTKRK-FSGDDFSQAIAKVAVAQICERV--------------GFQ 45
M++GGG+ GS+ ++ KRK F G DF+ +IA++AVAQICE V F
Sbjct: 1 MNNGGGDGGSQQRELPGKRKLFRGSDFAFSIARMAVAQICESVEVNSYQESQTREAVRFS 60
Query: 46 TFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASD 105
+F +SAL L D+AV+YI S+GK A+ YAN++GR +GN DI Q LEDLG GF+G SD
Sbjct: 61 SFHESALEALTDVAVQYIQSIGKTAHLYANIAGRVDGNSLDIVQALEDLGSGLGFAGFSD 120
Query: 106 INHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAW 165
+HCLA SG+++++I Y EA ++PF Y++P FP K++KP SF ++G EPP E IP W
Sbjct: 121 ADHCLADSGVLKDIIHYTGEAEEMPFVYSLPRFPFSKEKKPAPSFSEVGPEPPDEHIPIW 180
Query: 166 LPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGD 225
LPAFP + +R+ ++ IE +++ S+ ++Q F
Sbjct: 181 LPAFPKTKLC-------DRSEETNAATIEGEIPRKENGSSLPSMQHSFDGGRLDIHTSPK 233
Query: 226 SSKE--KKTVESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDN-HISVM 282
+E K VE NPFL+APL EK VS VV P ++S EV N VA KH+ +N HI V+
Sbjct: 234 DVRESPKAVVEGNPFLTAPLRIVEKNVSPVVRPLEISNEVVRTNHVADKHMSNNHHIPVL 293
Query: 283 ETFAPA--LEAMKNRFCESRE-EQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGG 339
E A + + M N ES + E++++ QR V+FKIG K+S S Q
Sbjct: 294 EASASSDKINNM-NWLAESEDGEKEDVARKQRTLVRFKIGTTKRSTCLAKSRSFQE---- 348
Query: 340 KIDPWFCKENENDERKGDLK 359
+ WF + + E+K ++K
Sbjct: 349 --EGWFQENEDKREKKSEIK 366
>gi|449440123|ref|XP_004137834.1| PREDICTED: uncharacterized protein LOC101219874 [Cucumis sativus]
gi|449518276|ref|XP_004166168.1| PREDICTED: uncharacterized LOC101219874 [Cucumis sativus]
Length = 370
Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MSDG-GGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIA 59
M DG G SK QQ RK G++F Q ++K+AVAQ+C VGFQ+F++SAL LADIA
Sbjct: 1 MRDGVGNNMKSKEQQSSDSRKCRGNEFVQEVSKIAVAQMCNSVGFQSFKESALDTLADIA 60
Query: 60 VRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVREL 119
++Y++ +GK A FYANL+GR E NVFDI +GLE+L QGF GA +HCLA+SG V+ +
Sbjct: 61 IKYLHHLGKIATFYANLAGRIECNVFDIIRGLEELEQSQGFLGAWQSDHCLANSGSVKNI 120
Query: 120 IQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESP 179
+ Y N ++PFA+ +P F V++ R+ +F+QIGE PP + IP+WLPAFPD TY S
Sbjct: 121 VCYVNSVQEIPFAHPLPCFSVIRKRESIPTFVQIGETPPSKHIPSWLPAFPDAHTYSHSA 180
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFL 239
+ + EKIEL KQ+RK E S++ LQ++ G S G+ E ESN L
Sbjct: 181 LWRRKPKELRAEKIELAKQRRKAEKSLLGLQQRLVSCG--SERSGNGEIEFSGGESNSLL 238
Query: 240 SAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFC-E 298
F+E E + LP +N K + +H+SV E FAPA+EA+K C
Sbjct: 239 GTC--FQEIE-DGIGLP--------YENTSGKDGI--SHLSVPEVFAPAIEAIKGGGCPN 285
Query: 299 SREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
S++E+ I RP V FK+ K L + S + M G + ++ + ++ +RK
Sbjct: 286 SQDEKAKILPRVRPLVHFKLETCKTFLGGSMNLSAK-MRGIRESVFWVRRDDERDRK 341
>gi|116794386|gb|ABK27125.1| unknown [Picea sitchensis]
Length = 388
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 212/350 (60%), Gaps = 31/350 (8%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D F +A+A++AVAQICE GFQ+ QQSAL LADIAVRY+ +GKAA++YA L+GR E N
Sbjct: 32 DAFGRAVARIAVAQICEGAGFQSCQQSALEALADIAVRYLRDLGKAAHYYAGLAGRTECN 91
Query: 84 VFDIFQGLEDLGLDQGFSGASD-INHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
FD+ +ED+ QGF GASD I+H ++ SG VRE++QY N A ++PFA +P FPVVK
Sbjct: 92 AFDVIHAMEDMFAAQGFVGASDVISHSVSGSGTVREIMQYTNRAEEIPFARPVPRFPVVK 151
Query: 143 DRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
R+ +FLQ+ E PP + IP WLPAFPD TY +P NER +D K+E +Q+RK
Sbjct: 152 KRELLPTFLQMKETPPHQHIPPWLPAFPDSHTYKSTPVWNERKTDPRMAKMEQARQRRKA 211
Query: 203 EMSMVNLQRQFSESGPSSFVHGDSSKEKK---------TVESNPFLSAPLHFEEKEVSSV 253
E S+V+LQ++ + + SS + + K +NPFL+ P+ EEK+VS V
Sbjct: 212 ERSLVSLQQRLASASGSSSLGLAMETDGKGKNSSPSPNPNPNNPFLAPPVGPEEKQVSPV 271
Query: 254 VLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFCESRE---EQKNIQ--- 307
+P LS+ AL+ P SV+E FAPA++A+K + E +KN +
Sbjct: 272 KIPPVLSRP-ALKLP-----------SVLEAFAPAIDAVKQGLDQVEELDGRRKNPRGSQ 319
Query: 308 --LDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
D+RP VQFK GKK+ + ++ + + WF ++ E D++K
Sbjct: 320 ALSDERPLVQFKFDFGKKAQMA-AHATGALRNETPLSSWFSRDEEMDDKK 368
>gi|297807575|ref|XP_002871671.1| hypothetical protein ARALYDRAFT_909531 [Arabidopsis lyrata subsp.
lyrata]
gi|297317508|gb|EFH47930.1| hypothetical protein ARALYDRAFT_909531 [Arabidopsis lyrata subsp.
lyrata]
Length = 380
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 202/352 (57%), Gaps = 30/352 (8%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQAIAKVAVAQICERV--------------GFQ 45
M++GGGE GS+ ++ KR S G+DF+ A+ ++A AQICE V F
Sbjct: 1 MTNGGGEGGSQRRELQGKRSISRGNDFAYAVVRMAAAQICESVEISSYQESQTREGLRFS 60
Query: 46 TFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASD 105
+FQ++AL L D+ ++YI ++GK ANFYAN++GR EGN DI Q LEDLG GF GA D
Sbjct: 61 SFQETALETLTDVVIQYIQNIGKTANFYANMAGRVEGNALDIVQALEDLGSGLGFDGAHD 120
Query: 106 INHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAW 165
++HCLA SG+V+++I+Y EA ++PF Y++P FP + ++P SF +IG EPP E IP W
Sbjct: 121 VDHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSEIGAEPPDEHIPIW 180
Query: 166 LPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGD 225
LPAFP+ + S N +KIE Q R+ S+ ++Q+ + D
Sbjct: 181 LPAFPETKMSNGSEETN-------VDKIEGDVQSRENGPSLSSMQQSVDVDRLKVQKYMD 233
Query: 226 SSKEKKTV-----ESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVV-DNHI 279
+K E NPFL+APL EK VS V P +L+KE N V +K++ +HI
Sbjct: 234 QKDVQKPTEEPEPEGNPFLAAPLWIGEKNVSRVFPPPELTKEEIRTNHVPEKYMSKSHHI 293
Query: 280 SVMETFAPALEAM-KNRFCESREEQK-NIQLDQRPPVQFKIGVGKKSLVKPL 329
+E +A + + KNR E+ + QK + +R ++FKIG K S+ L
Sbjct: 294 PALEAYALSDKINDKNRLAETEDGQKRDGGRTERALLRFKIGTRKASVCWTL 345
>gi|224069535|ref|XP_002326367.1| predicted protein [Populus trichocarpa]
gi|222833560|gb|EEE72037.1| predicted protein [Populus trichocarpa]
Length = 315
Score = 230 bits (586), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 189/357 (52%), Gaps = 64/357 (17%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MS+GG + +T + DDF +A++++AVAQICE VGF F++SAL L DI +
Sbjct: 1 MSNGG--------EDNTPGRPKSDDFGRAVSRMAVAQICESVGFHGFKESALDSLNDITI 52
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDL-GLDQGFSGASDINHCLASSGIVREL 119
RY+ +GK A+FYANLSGR + N FDI + ED+ G QGF GAS +CL +SG ++E+
Sbjct: 53 RYLCDLGKIASFYANLSGRTQCNFFDIVRSFEDIVGASQGFLGASISGNCLVNSGTIKEI 112
Query: 120 IQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESP 179
I + ++PFA +P FPV++ RK SF + E PP + IPAWLPA PDP TY +P
Sbjct: 113 IDFVGSNDEIPFAQPVPRFPVIRVRKLIPSFESMSEAPPGKHIPAWLPALPDPHTYLHTP 172
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFL 239
NERA D EKIE +Q+RK E ++++LQ++
Sbjct: 173 MWNERAVDPRAEKIEQARQRRKAERALLSLQQRL-------------------------- 206
Query: 240 SAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMK-NRFCE 298
+VLP KL NH+SVME FAP +EA K C+
Sbjct: 207 ------------LIVLPDKLK----------------NHVSVMEAFAPVIEAAKEGGICD 238
Query: 299 SREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
+ ++ ++R V FK GKK L + L S G+ W +++E D++K
Sbjct: 239 DVDVERKSLPEKRLAVAFKFKTGKKLLGESLDLSLLKKGEGRTGHWLGRDDERDDKK 295
>gi|15242340|ref|NP_197061.1| Bromodomain transcription factor [Arabidopsis thaliana]
gi|9755812|emb|CAC01756.1| putative protein [Arabidopsis thaliana]
gi|332004796|gb|AED92179.1| Bromodomain transcription factor [Arabidopsis thaliana]
Length = 381
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 195/348 (56%), Gaps = 31/348 (8%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQAIAKVAVAQICERV---------------GF 44
M +GGGE GS+ ++ KR S G+DF+ A+A++A AQICE V F
Sbjct: 1 MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60
Query: 45 QTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGAS 104
+FQ++AL L D+ ++YI ++GK A FY N++GR E N DI Q LEDLG GF GA
Sbjct: 61 SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120
Query: 105 DINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPA 164
D+ HCLA SG+V+++I+Y EA ++PF Y++P FP + ++P SF IG EPP E IP
Sbjct: 121 DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEHIPV 180
Query: 165 WLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESG---PSSF 221
WLPAFP+ + S N +KIE Q R S++++Q+ S
Sbjct: 181 WLPAFPETKMSNGSEEIN-------VDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQKSM 233
Query: 222 VHGDSSKEKKTVESNPFLSAPLHFEEKEV--SSVVLPAKLSKEVALQNPVAKKHV-VDNH 278
D K + E NPFL+AP+ EK V S VV P++L KE N + +KH+ + +H
Sbjct: 234 DQKDVQKPIEEPEGNPFLAAPIWVGEKNVSLSRVVCPSELRKEEISTNHLPEKHMSMSHH 293
Query: 279 ISVMETFAPALEAM-KNRFCESREEQK-NIQLDQRPPVQFKIGVGKKS 324
I +E +A + + KNR +EQK + Q ++FKIG K S
Sbjct: 294 IPALEAYALSDKINDKNRLAGMEDEQKRDGARTQGALLRFKIGTRKAS 341
>gi|224140205|ref|XP_002323475.1| predicted protein [Populus trichocarpa]
gi|222868105|gb|EEF05236.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 189/358 (52%), Gaps = 65/358 (18%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MS+GG E +T + DDF +A++++AVAQICE GF F++SAL L+D+ +
Sbjct: 1 MSNGGEE--------NTPGRPKSDDFGRAVSRMAVAQICESAGFDGFKKSALDSLSDVTI 52
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDL--GLDQGFSGASDINHCLASSGIVRE 118
+Y+ +GK A FYANLSGR + + FDI + ED+ G GF GAS ++CL +SG ++E
Sbjct: 53 QYLCDLGKTARFYANLSGRTQCHFFDIVRSFEDIIIGASHGFLGASSSDNCLVNSGTIKE 112
Query: 119 LIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFES 178
LI + ++PFA +P FPV++DRK +F ++ E PP + IPAWLPA PDP TY +
Sbjct: 113 LIDFVGSNDEIPFAQPVPRFPVIRDRKLIPTFEKMSEVPPGKHIPAWLPALPDPHTYLHT 172
Query: 179 PSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
P NER D E IE +Q+RK E ++++LQ++
Sbjct: 173 PMWNERLVDPRAETIEQARQRRKAERALLSLQKRL------------------------- 207
Query: 239 LSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMK-NRFC 297
+VL KL NHISVM+ FAPA+EA K C
Sbjct: 208 -------------LIVLSDKLK----------------NHISVMQAFAPAIEAAKEGGIC 238
Query: 298 ESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
+ + ++ ++RP V FK GKK L + L S G + W +++E D++K
Sbjct: 239 DDGDFERKTLPEKRPAVIFKFKTGKKLLGESLDLSLSKKGGRRTGHWLGRDDERDDKK 296
>gi|77556196|gb|ABA98992.1| Bromodomain associated family protein, expressed [Oryza sativa
Japonica Group]
gi|77556197|gb|ABA98993.1| Bromodomain associated family protein, expressed [Oryza sativa
Japonica Group]
gi|77556198|gb|ABA98994.1| Bromodomain associated family protein, expressed [Oryza sativa
Japonica Group]
gi|125579814|gb|EAZ20960.1| hypothetical protein OsJ_36612 [Oryza sativa Japonica Group]
gi|215706390|dbj|BAG93246.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215734846|dbj|BAG95568.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768381|dbj|BAH00610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 178/329 (54%), Gaps = 36/329 (10%)
Query: 43 GFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD-QGFS 101
GF +SA+ L D+ +RY+ +G+ A F ANL+GR N +DI Q LE++G D GF
Sbjct: 38 GFDCAHRSAVDALVDVILRYVVHLGRTAAFNANLAGRVLANEYDIIQALEEIGTDFDGFV 97
Query: 102 GASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK-DRKPKSSFLQIGEEPPIE 160
GA+ + CL SG+VRELI Y +VPF +P FPV + + +P SF G+E ++
Sbjct: 98 GAATSDRCLVGSGVVRELIDYVESKPEVPFVRPLPSFPVPRVEPQPAQSFAMAGKESGMK 157
Query: 161 DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSS 220
+P WLP FPDP TY + +E + + +K+E +Q+RK E S+++LQR+ + +G
Sbjct: 158 HVPEWLPVFPDPHTYIRTEVWSEEEAKARVDKVEQVRQRRKAEKSLLSLQRRLALAGADG 217
Query: 221 F---VHGDSSKEKKTVE-----SNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKK 272
F V +++++ K ++ NPFL L EKEVS V + + K
Sbjct: 218 FRPAVTENTAEKGKEIQVAGSKRNPFLEPALPPGEKEVSDVAMQPQRRK----------- 266
Query: 273 HVVDNHISVMETFAPALEAMKNRFCES------REEQKNIQLDQRPPVQFKIGVGKKSLV 326
ISV++ FAPA++A ++ + QK+I +R PV KIG+ KK L
Sbjct: 267 ------ISVLDAFAPAIQAANMMDIDTGPGWDNNQNQKSIVPKERAPVHLKIGIDKKPLS 320
Query: 327 KPLKSSPQNMDGGKIDPWFCKENENDERK 355
L S P ++ + DP F KE DERK
Sbjct: 321 AVLNSKPLDL---REDPSFLKEEVKDERK 346
>gi|115489232|ref|NP_001067103.1| Os12g0574800 [Oryza sativa Japonica Group]
gi|113649610|dbj|BAF30122.1| Os12g0574800, partial [Oryza sativa Japonica Group]
Length = 489
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 178/329 (54%), Gaps = 36/329 (10%)
Query: 43 GFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD-QGFS 101
GF +SA+ L D+ +RY+ +G+ A F ANL+GR N +DI Q LE++G D GF
Sbjct: 161 GFDCAHRSAVDALVDVILRYVVHLGRTAAFNANLAGRVLANEYDIIQALEEIGTDFDGFV 220
Query: 102 GASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK-DRKPKSSFLQIGEEPPIE 160
GA+ + CL SG+VRELI Y +VPF +P FPV + + +P SF G+E ++
Sbjct: 221 GAATSDRCLVGSGVVRELIDYVESKPEVPFVRPLPSFPVPRVEPQPAQSFAMAGKESGMK 280
Query: 161 DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSS 220
+P WLP FPDP TY + +E + + +K+E +Q+RK E S+++LQR+ + +G
Sbjct: 281 HVPEWLPVFPDPHTYIRTEVWSEEEAKARVDKVEQVRQRRKAEKSLLSLQRRLALAGADG 340
Query: 221 F---VHGDSSKEKKTVE-----SNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKK 272
F V +++++ K ++ NPFL L EKEVS V + + K
Sbjct: 341 FRPAVTENTAEKGKEIQVAGSKRNPFLEPALPPGEKEVSDVAMQPQRRK----------- 389
Query: 273 HVVDNHISVMETFAPALEAMKNRFCES------REEQKNIQLDQRPPVQFKIGVGKKSLV 326
ISV++ FAPA++A ++ + QK+I +R PV KIG+ KK L
Sbjct: 390 ------ISVLDAFAPAIQAANMMDIDTGPGWDNNQNQKSIVPKERAPVHLKIGIDKKPLS 443
Query: 327 KPLKSSPQNMDGGKIDPWFCKENENDERK 355
L S P ++ + DP F KE DERK
Sbjct: 444 AVLNSKPLDL---REDPSFLKEEVKDERK 469
>gi|125537130|gb|EAY83618.1| hypothetical protein OsI_38844 [Oryza sativa Indica Group]
Length = 364
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 179/330 (54%), Gaps = 38/330 (11%)
Query: 43 GFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD-QGFS 101
GF +SA+ L D+ +RY+ +G+ A F ANL+GR N +DI Q LE++G D GF
Sbjct: 36 GFDCAHRSAVDALVDVILRYVVHLGRTAAFNANLAGRVLANEYDIIQALEEIGTDFDGFV 95
Query: 102 GASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK-DRKPKSSFLQIGEEPPIE 160
GA+ + CL SG+VRELI Y +VPF +P FPV + + +P SF G+E ++
Sbjct: 96 GAATSDRCLVGSGVVRELIDYVESKPEVPFVRPLPSFPVPRVEPQPAQSFAMAGKESGMK 155
Query: 161 DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSS 220
+P WLP FPDP TY + +E + + +K+E +Q+RK E S+++LQR+ + +G
Sbjct: 156 HVPEWLPVFPDPHTYIRTEVWSEEEAKARVDKVEQVRQRRKAEKSLLSLQRRLALAGADG 215
Query: 221 F---VHGDSSKEKKTVE-----SNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKK 272
F V +++++ K ++ NPFL L EKEVS V + + K
Sbjct: 216 FRPAVTENTAEKGKEIQVAGSKRNPFLEPALPPGEKEVSDVAMQPQRRK----------- 264
Query: 273 HVVDNHISVMETFAPALEAMKNRF-------CESREEQKNIQLDQRPPVQFKIGVGKKSL 325
ISV++ FAPA++A +N ++ + QK I +R PV KIG+ KK L
Sbjct: 265 ------ISVLDAFAPAIQA-ENMMDIDTGPGWDNNQNQKGIVPKERAPVHLKIGIDKKPL 317
Query: 326 VKPLKSSPQNMDGGKIDPWFCKENENDERK 355
L S P ++ + DP F KE DERK
Sbjct: 318 SAVLNSKPLDL---REDPSFLKEEVKDERK 344
>gi|168027633|ref|XP_001766334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682548|gb|EDQ68966.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 202
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 127/188 (67%), Gaps = 3/188 (1%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
GD+F++A+A AVAQ+CE +GF Q++A+ LADIA+RY++ +GKAA+FYANLSGR +
Sbjct: 15 GDEFARAVANTAVAQVCEGLGFHAIQRTAVETLADIALRYLSDLGKAAHFYANLSGRMQC 74
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N FD+ LED+ ++ CLA+S +R++++Y A ++PFA +P FPV K
Sbjct: 75 NAFDVILALEDMAPGAAVDTST---RCLANSSALRDVMRYVEYAEEIPFARPVPRFPVQK 131
Query: 143 DRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
R P +F Q+GEEPP IP WLPAFPDP TY +P +R SD +K+EL +Q+RK
Sbjct: 132 KRTPPPTFAQLGEEPPFPHIPRWLPAFPDPHTYQSTPVWVDRKSDPRMDKLELARQRRKA 191
Query: 203 EMSMVNLQ 210
E S+ +L
Sbjct: 192 ERSLFSLH 199
>gi|242083172|ref|XP_002442011.1| hypothetical protein SORBIDRAFT_08g007140 [Sorghum bicolor]
gi|241942704|gb|EES15849.1| hypothetical protein SORBIDRAFT_08g007140 [Sorghum bicolor]
Length = 376
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 183/330 (55%), Gaps = 37/330 (11%)
Query: 43 GFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQ-GFS 101
GF +SA+ + DI +RYI +G++A F+ANL+GRA N D+ Q LE++G D GF+
Sbjct: 47 GFDCAHRSAVDAVVDIVLRYITHLGRSAAFHANLAGRALANELDVIQALEEVGADTDGFA 106
Query: 102 GASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK-DRKPKSSFLQIGEEPPIE 160
GA+ HCL SG+V++L+ + +VPFA +P FP+ + + +P +SF G E +
Sbjct: 107 GAATTGHCLVGSGVVKDLLAFVYSKDEVPFARPLPRFPIQRAEPQPSASFAVTGRETGMR 166
Query: 161 DIPAWLPAFPDPQTYFESPSQNE-RASDSYTEKIELGKQQRKMEMSMVNLQRQFSESG-- 217
+P WLPAFPDP TY + E A+ +K+E +Q+RK E S+++LQR+ + +G
Sbjct: 167 HVPEWLPAFPDPHTYVRTEVWVEPPATKDRVDKVEQVRQRRKAEKSLLSLQRRLAMAGAD 226
Query: 218 ---PSSFVHGDSSKEKKTVES-----NPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPV 269
P+ V DS+++ K +++ NPFL L EK+VS V LP P
Sbjct: 227 GFRPAVAVAQDSAEKGKEIQAAGTKRNPFLEPALLPGEKDVSEVDLP-----------PE 275
Query: 270 AKKHVVDNHISVMETFAPALEAMKNRFCES----REEQKNIQLDQRPPVQFKIGVGKKSL 325
KK +SV+E FAPA++ R ++ + Q++I +R PV KIG KK L
Sbjct: 276 KKK------LSVLEAFAPAIQVRTIREIDAGAGLDQNQRSIVPKERAPVHLKIGFSKKPL 329
Query: 326 VKPLKSSPQNMDGGKIDPWFCKENENDERK 355
L S ++ + DP F KE D++K
Sbjct: 330 EAALNSRALDL---REDPSFLKEEAKDDKK 356
>gi|414878039|tpg|DAA55170.1| TPA: hypothetical protein ZEAMMB73_458341 [Zea mays]
Length = 357
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/351 (36%), Positives = 195/351 (55%), Gaps = 37/351 (10%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
SGDDF +A+A+ AVAQ E GF +SA+ + DI +RYI +G++A F+ANL+GRA
Sbjct: 7 SGDDFGRAVARAAVAQALEAAGFDCAHRSAVDAVVDILLRYITHLGRSAAFHANLAGRAL 66
Query: 82 GNVFDIFQGLEDLGLDQ-GFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPV 140
N D+ Q LE++G D GF+GA+ HCL SSG+VR+L+ + + +VPFA +P FPV
Sbjct: 67 ANELDVIQALEEVGADTDGFAGAAATGHCLVSSGVVRDLMAFVDSKDEVPFARPLPRFPV 126
Query: 141 VKDR-KPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNE-RASDSYTEKIELGKQ 198
+ + +P +S G E + +P WLP FPDP TY + E A+ +K+E +Q
Sbjct: 127 QRVQPQPTASLAVAGRETGMRHVPEWLPVFPDPHTYVSTEVWVEPPATKDRVDKVEQVRQ 186
Query: 199 QRKMEMSMVNLQRQFSESG-----PSSFVHGDSSKEKKTVES-----NPFLSAPLHFEEK 248
+RK E S+++LQ++ + +G P + V D++++ K +++ NPFL L EK
Sbjct: 187 RRKAEKSLLSLQQRLAMAGADGFRPVAAVAQDNAEKGKEIQAAGTKRNPFLEPALPPGEK 246
Query: 249 EVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFCES----REEQK 304
VS V +P + K SV+E FAPA++A + ++ + Q+
Sbjct: 247 YVSEVDMPPEKKKP-----------------SVLEAFAPAIQARTIKEFDAGAGLDQNQR 289
Query: 305 NIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
NI +R V KIG GKK L S ++ + DP F KE D++K
Sbjct: 290 NIVPKERARVHLKIGFGKKPFAAALNSRALDL---REDPSFLKEEAKDDKK 337
>gi|414878293|tpg|DAA55424.1| TPA: hypothetical protein ZEAMMB73_159705 [Zea mays]
Length = 370
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/349 (35%), Positives = 195/349 (55%), Gaps = 35/349 (10%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
S D+F +A+A+ AVAQ + GF +SA+ + D +RYI +G++A F+ANL+GRA
Sbjct: 22 SRDEFGRAVARAAVAQALQAAGFDCAHRSAVDAVVDTVLRYITHLGRSAAFHANLAGRAH 81
Query: 82 GNVFDIFQGLEDLGLDQ-GFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPV 140
N D+ Q LE++G D GF+GA+ HCL SG+V++L+ + + +VPFA +P FP+
Sbjct: 82 ANELDVIQALEEVGADTYGFAGAATTGHCLVGSGVVKDLMAFVHSKDEVPFARPLPRFPI 141
Query: 141 VK-DRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNE-RASDSYTEKIELGKQ 198
+ + +P +SF G E ++ +P WLPAFPDP TY + E A+ +K+E +Q
Sbjct: 142 QRVEPQPSASFTVTGRETGMKHVPEWLPAFPDPHTYVTTEVWVEPPATKDRVDKVEQVRQ 201
Query: 199 QRKMEMSMVNLQRQFSESGPSSF---VHGDSSKEKKTVES-----NPFLSAPLHFEEKEV 250
+RK E S+++LQR+ + +G F V D++ + K +++ NPFL L +K+V
Sbjct: 202 RRKAEKSLLSLQRRLAMAGADRFRPAVAHDNALKGKEIQAAGTKRNPFLEPALLPGQKDV 261
Query: 251 SSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFCESR----EEQKNI 306
S V +P P KK SV+E FAPA++A R ++ + Q+NI
Sbjct: 262 SEVDMP-----------PEKKK------FSVLEAFAPAIQARTIREIDASAGLDQNQRNI 304
Query: 307 QLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
+R PV KIG KSL S ++ + D +F KE D++K
Sbjct: 305 VPKERAPVHLKIGFSNKSLAAAQNSRALDL---RDDLFFLKEETKDDKK 350
>gi|326532974|dbj|BAJ89332.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 507
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 188/347 (54%), Gaps = 35/347 (10%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D+F +A+A+ AVAQ E GF +SA+ L D+ +RY+ +G+AA F+ANL+GRA N
Sbjct: 161 DEFGRAVARAAVAQALEAAGFDCTHRSAVDALVDVLLRYLTHLGRAAAFHANLAGRALAN 220
Query: 84 VFDIFQGLEDLGLD-QGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
+DI Q LE++G D GF+GA CL SG+V++L+ + + +VPF +P FP+ +
Sbjct: 221 EYDIIQSLEEIGTDFDGFAGAGTSGRCLVGSGVVKDLMAFVDSKDEVPFTRPLPKFPIPR 280
Query: 143 DRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
+P SF E + +P WLPAFPDP TY + +E+A+ + +E +Q+RK
Sbjct: 281 APQPTPSFAVAERETGMRHVPEWLPAFPDPHTYVRTEVWSEQATKDRVDMVEQVRQRRKA 340
Query: 203 EMSMVNLQRQFSESGPSSF---VHGDSSKEKKTVE-----SNPFLSAPLHFEEKEVSSVV 254
E S+++LQ++ + +G F V DS + K ++ NPFL L +KEVS V
Sbjct: 341 EKSLLSLQQRLALAGADGFRPAVSEDSVAKGKEIQPAGSNRNPFLEPALPHGDKEVSEVD 400
Query: 255 LPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFCESRE------EQKNIQL 308
+P++ K +SV++ FAPA++ +S QK+I
Sbjct: 401 IPSERKK-----------------LSVLDAFAPAIQGANAMELDSGTGWDQNLNQKSIVP 443
Query: 309 DQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
R PV K G+ KK L L S+ ++ + DP F KE + D+RK
Sbjct: 444 KVRAPVHLKFGIDKKPLAVALISNSMDL---REDPSFLKEEQKDDRK 487
>gi|297798478|ref|XP_002867123.1| hypothetical protein ARALYDRAFT_491232 [Arabidopsis lyrata subsp.
lyrata]
gi|297312959|gb|EFH43382.1| hypothetical protein ARALYDRAFT_491232 [Arabidopsis lyrata subsp.
lyrata]
Length = 355
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 194/360 (53%), Gaps = 30/360 (8%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MS + G +++ + R +FS A AK AVAQ+CE VG++ F+ AL LA A+
Sbjct: 1 MSTERAQDGDRNEAASSSRCSESYEFSHAAAKAAVAQVCESVGYEHFKDPALESLAGFAL 60
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
+YI +GK A +ANL+GR++ NVFDI L+DL D G G S + L S +RE+I
Sbjct: 61 QYILQLGKTATSFANLTGRSQCNVFDIILALDDLT-DNGEEGISSESCSLGRSVKLREII 119
Query: 121 QYANEATDVPFAYAIPHFPVV---KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFE 177
Y N + ++PF+ +P FPV K R SF++IGE PP + IP WLPAFPDP TY E
Sbjct: 120 DYVNSSEEIPFSQPLPRFPVAISDKSRNLIPSFVEIGETPPGKHIPLWLPAFPDPHTYKE 179
Query: 178 SPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQF-SESGPSSFVHGDSSKEKKTVESN 236
+P ER SD +KIE +Q+RK E ++++LQR+ + + V GD K+ +
Sbjct: 180 TPMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKLSSRNTVWGDLDGVKEEMRE- 238
Query: 237 PFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRF 296
EE ++ SV P K +L + +SV+E FAPA+EA ++ F
Sbjct: 239 ---------EESDLRSVSPPISEEKVESLNR---------DGLSVIEAFAPAMEAARDGF 280
Query: 297 -CESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
E+ E K ++P K+ KK L +PL S Q M G F +E + D+++
Sbjct: 281 SSEAHTEWKK----KKPVALSKLRTEKKFLGQPLDLSLQ-MKGEDRPLSFVREEDRDDKR 335
>gi|357115835|ref|XP_003559691.1| PREDICTED: uncharacterized protein LOC100844124 [Brachypodium
distachyon]
Length = 359
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 207/368 (56%), Gaps = 50/368 (13%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
MS GGG GS + +G +F +A+A+ AVAQ+ + GF +SA+ L D+ +
Sbjct: 1 MSKGGG-GGSW--------RMNGGEFGRAVARAAVAQMLQAAGFTCAHRSAVDALVDVLL 51
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD-QGFSGASDI-NHCLASSGIVRE 118
RYI +G AA F+ANL+GRA N D+ Q LE G QGF+GAS + CL +S ++R+
Sbjct: 52 RYICHLGSAATFHANLAGRAIPNECDVVQFLEVSGAAYQGFAGASSASSRCLVNSDVIRD 111
Query: 119 LIQYANEATDVPFAYAIPHFPVVKDRKPKS--SFLQIGEEPPIEDIPAWLPAFPDPQTYF 176
+I +A A D PF +P FP + P+S SF +G E ++ +P WLPAFPDP+TY
Sbjct: 112 IIMFAGAADDKPFMRQLPRFP-TQHTLPQSSLSFAALGRESGMKHVPEWLPAFPDPRTYL 170
Query: 177 ESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSF----VHGDSSKEKKT 232
+ +E+ +++ ++++ +QQ K E S+++LQ++ + +G F V + K K+
Sbjct: 171 RTEVLSEKVNEATVDEVQQLRQQMKAEKSLLSLQQRLALAGADGFRPTAVEDGAGKGKEL 230
Query: 233 ----VESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPA 288
++SNPFL + + EK+VS V +P V N +SV+E FAPA
Sbjct: 231 DVVGIKSNPFLDSAFPYGEKKVSEVAVPN-----------------VGNKLSVLEAFAPA 273
Query: 289 L-EAMKNRFCESREE-----QKNIQLDQRPPVQFKIGVGKKSLVKPLKS-SPQNMDGGKI 341
E+ + E+R + QK I +RPPV F++G+ +KS+V L S + ++ +G
Sbjct: 274 FAESEGEKLDEARHKDQARCQKRILPKERPPVYFRMGINRKSIVMTLNSRALEDREG--- 330
Query: 342 DPWFCKEN 349
P+F K++
Sbjct: 331 -PFFLKDD 337
>gi|242085968|ref|XP_002443409.1| hypothetical protein SORBIDRAFT_08g019060 [Sorghum bicolor]
gi|241944102|gb|EES17247.1| hypothetical protein SORBIDRAFT_08g019060 [Sorghum bicolor]
Length = 368
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 181/340 (53%), Gaps = 52/340 (15%)
Query: 43 GFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD-QGFS 101
GF +SA+ + D+ +RYI +G++A F+ANL+GRA N D+ Q LE++G D GF+
Sbjct: 34 GFDCAHRSAVDAVVDVLLRYITHLGRSAAFHANLAGRALANELDVIQALEEVGNDTDGFA 93
Query: 102 GASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQI------GE 155
GA+ HCL SG+VR+L+ + + +VPFA +P FPV + + P+ + G
Sbjct: 94 GAAATGHCLVGSGVVRDLMAFVDTKDEVPFARPLPRFPVQRVQPPQPTASPASAAAAEGR 153
Query: 156 EPPIEDIPAWLPAFPDPQTY------FESPSQNERASDSYTEKIELGKQQRKMEMSMVNL 209
+ + +P WLPAFPDP TY E P +R +K+E +Q+RK E S+++L
Sbjct: 154 DAGMRHVPEWLPAFPDPHTYVSTEVWVEPPPTKDR-----VDKVEQVRQRRKAEKSLLSL 208
Query: 210 QRQFSESGPSSF-----VHGDSSKEKKTVES-----NPFLSAPLHFEEKEVSSVVLPAKL 259
QR+ + +G F V DS+++ K +++ NPFL L EK+VS V +P +
Sbjct: 209 QRRLAMAGADGFRPAVGVEQDSAEKGKEIQAAGTKRNPFLEPALPPGEKDVSEVDMPPEK 268
Query: 260 SKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRFCES----REEQKNIQLDQRPPVQ 315
K +SV+E FAPA++A R ++ + Q++I +R PV
Sbjct: 269 KK-----------------LSVLEAFAPAIQARTVREIDAGAGVDQNQRSIVPKERAPVH 311
Query: 316 FKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
K+G KK L L S ++ + DP F KE D++K
Sbjct: 312 LKLGFEKKPLAAALNSRALDL---REDPSFLKEEAKDDKK 348
>gi|90657625|gb|ABD96923.1| hypothetical protein, partial [Cleome spinosa]
Length = 264
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 11/257 (4%)
Query: 100 FSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPI 159
F+GASD++HCLA SG+V+++I+Y EA +P+AY++P FP+ K + P SSF IG EPP
Sbjct: 1 FAGASDVDHCLADSGVVKDIIRYIGEAEVMPYAYSLPRFPINKGKSPASSFSIIGAEPPD 60
Query: 160 EDIPAWLPAFPDPQTYFESPS-QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGP 218
E IP WLPAFP+ +T+ +S + +ERA D + + EL R E +L Q S S
Sbjct: 61 EHIPVWLPAFPETKTHVQSEAGSDERAVDDDSGRSEL--DMRSKENGSAHLTMQLSSS-- 116
Query: 219 SSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNH 278
D + +VE NPF +APL F EKEVS +V PA+LS E A N + H+++NH
Sbjct: 117 -----VDQKDLEISVEGNPFFTAPLRFGEKEVSLIVRPAELSNEAASINRSPRIHMINNH 171
Query: 279 ISVMETFAPALEAMKNRFCESREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDG 338
I + E F PA E ++N + ES +K R V FKIG K + + + +N D
Sbjct: 172 IPLFEAFTPANEIVEN-WSESENREKKEPTKARSLVHFKIGCPKAPMGLSINRNLENKDN 230
Query: 339 GKIDPWFCKENENDERK 355
K+ WF + ++ +E+K
Sbjct: 231 RKVAAWFWEGDDKNEKK 247
>gi|302754082|ref|XP_002960465.1| hypothetical protein SELMODRAFT_229939 [Selaginella moellendorffii]
gi|300171404|gb|EFJ38004.1| hypothetical protein SELMODRAFT_229939 [Selaginella moellendorffii]
Length = 364
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 154/279 (55%), Gaps = 18/279 (6%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D+F + +AK+AVAQICE VGF + Q SA+ LAD+A+RY+ + +AA+FY+NL+ R E N
Sbjct: 13 DEFGRIVAKMAVAQICESVGFHSIQASAMETLADVAIRYLRDLARAAHFYSNLAARIESN 72
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
FD+ +ED+G A+D + +A S +RE++++ + ++PFA +P FPV K
Sbjct: 73 AFDLIMAMEDVG---PAPPAADPSRPIARSSALREVMRFVEYSEEIPFARPLPRFPVAKK 129
Query: 144 RKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKME 203
R SF Q+GE PP IP+WLPA PDP TY +P +R + ++E +Q+RK E
Sbjct: 130 RLAAPSFAQLGEAPPGSHIPSWLPALPDPHTYRHTPVWPDRKREPAANRLEQARQRRKAE 189
Query: 204 MSMVNLQRQFSESGPSSFVHGDSSKEKKTVE--------SNPFLSAPLHFEEKEVSSVVL 255
S+V L + S + +S V D KE E N FL+ PL KE+ VV
Sbjct: 190 SSLVALHSRLSST--ASMVFKDREKENSGSEENGSGSGSGNAFLAPPLAAGAKEL-MVVQ 246
Query: 256 PAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKN 294
+N VV S++E FA +E+ N
Sbjct: 247 FGGFKDGGGGEN----AGVVPQVPSIVEAFASVVESASN 281
>gi|302767674|ref|XP_002967257.1| hypothetical protein SELMODRAFT_230957 [Selaginella moellendorffii]
gi|300165248|gb|EFJ31856.1| hypothetical protein SELMODRAFT_230957 [Selaginella moellendorffii]
Length = 353
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 154/279 (55%), Gaps = 18/279 (6%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D+F + +AK+AVAQICE VGF + Q SA+ LAD+A+RY+ + +AA+FY+NL+ R E N
Sbjct: 13 DEFGRIVAKMAVAQICESVGFHSIQASAMETLADVAIRYLRDLARAAHFYSNLAARIESN 72
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
FD+ +ED+G A+D + +A S +RE++++ + ++PFA +P FPV K
Sbjct: 73 AFDLIMAMEDVG---PAPPAADPSRPIARSSALREVMRFVEYSEEIPFARPLPRFPVAKK 129
Query: 144 RKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKME 203
R SF Q+GE PP IP+WLPA PDP TY +P +R + ++E +Q+RK E
Sbjct: 130 RLAAPSFAQLGEAPPGSHIPSWLPALPDPHTYRHTPVWPDRKREPAANRLEQARQRRKAE 189
Query: 204 MSMVNLQRQFSESGPSSFVHGDSSKEKKTVE--------SNPFLSAPLHFEEKEVSSVVL 255
S+V L + S + +S V D KE E N FL+ PL KE+ VV
Sbjct: 190 SSLVALHSRLSST--ASMVFKDREKENSGSEENVSGSGSGNAFLAPPLAPGAKEL-MVVQ 246
Query: 256 PAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKN 294
+N VV S++E FA +E+ N
Sbjct: 247 FGGFKDGGGGEN----AGVVPQVPSIVEAFASVVESASN 281
>gi|356546003|ref|XP_003541422.1| PREDICTED: uncharacterized protein LOC100810245 [Glycine max]
Length = 354
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 177/338 (52%), Gaps = 20/338 (5%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
DDF +A A++AVAQ+C+ GFQ SAL D+AVRY+ G+ A +AN +GR++
Sbjct: 11 DDFGRAAARLAVAQLCDAAGFQGATASALDAFTDVAVRYLLDQGRTAESHANHAGRSQCT 70
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
VFD +G+EDL + FSGA AS G +RE+I + A ++PFA IP+FPVV++
Sbjct: 71 VFDAIRGMEDLEAPRAFSGA-------ASGGGIREIISFVESADEIPFAQPIPNFPVVQE 123
Query: 144 RKP-KSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
R+ SF Q+GE PP + IPAWLPA PDP TY +P +ER SD +KIE +Q+RK
Sbjct: 124 RRRIIPSFDQMGEAPPAKHIPAWLPALPDPHTYIHTPVWDERISDPREDKIEQARQRRKA 183
Query: 203 EMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSVVLPAKLSKE 262
E S+++LQ++ S +S + +P + + V+ + +E
Sbjct: 184 ERSLLSLQKRLLLRNGSVEASAITSSSPNSAALDPQVVGEDDKVVDKDVEKVVKVSVLEE 243
Query: 263 VALQNPVAKKHVVDNHISVMETFAPALEAM-KNRFCESR----EEQKNIQLDQRPPVQFK 317
+SV+E F PA+E + C+ E++K+ RP V FK
Sbjct: 244 AGGDGD-------GKRVSVLEAFGPAIEMLGSGGLCDEDDGLGEKEKSELPVVRPTVHFK 296
Query: 318 IGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
GKK + + L + D +E+E D++K
Sbjct: 297 FRTGKKLIGESLDMRIRKKDASPTAVLAGREDERDDKK 334
>gi|18418431|ref|NP_567964.1| TBP-associated factor 8 [Arabidopsis thaliana]
gi|13430532|gb|AAK25888.1|AF360178_1 unknown protein [Arabidopsis thaliana]
gi|4455179|emb|CAB36711.1| hypothetical protein [Arabidopsis thaliana]
gi|7270384|emb|CAB80151.1| hypothetical protein [Arabidopsis thaliana]
gi|14532740|gb|AAK64071.1| unknown protein [Arabidopsis thaliana]
gi|39545924|gb|AAR28025.1| TAF8 [Arabidopsis thaliana]
gi|332660961|gb|AEE86361.1| TBP-associated factor 8 [Arabidopsis thaliana]
Length = 353
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 185/339 (54%), Gaps = 38/339 (11%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
+FS A AK AVAQ+CE VG++ F+ AL L+ A++YI +GK A +ANL+GR++ NV
Sbjct: 25 EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV--- 141
FDI L+DL + G G S + L S +RE+I + N + +VPF+ +P FPV
Sbjct: 85 FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
+ RK SF++IGE PP + IP WLPAFPDP TY E+P ER SD +KIE +Q+RK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204
Query: 202 MEMSMVNLQRQF----SESGPSSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSVVLPA 257
E ++++LQR+ S P V GD K+ + + E E+ SV
Sbjct: 205 AERALLSLQRKLVCKISSRNP---VWGDMDGVKEEMRDD----------ESELRSVSSGE 251
Query: 258 KLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRF-CESREEQKNIQLDQRPPVQF 316
K+ + + + +SV+E FAPA+EA ++ F E+ E K +P
Sbjct: 252 KV------------ESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKK----NKPVALS 295
Query: 317 KIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
K+ KK L +PL S Q M G F +E + D+++
Sbjct: 296 KLRTEKKFLGQPLDLSLQ-MKGEDRPISFVREEDRDDKR 333
>gi|21536920|gb|AAM61252.1| unknown [Arabidopsis thaliana]
Length = 353
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 184/339 (54%), Gaps = 37/339 (10%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
+FS A AK AVAQ+CE VG++ F+ AL L+ A++YI +GK A +ANL+GR++ NV
Sbjct: 25 EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV--- 141
FDI L+DL + G G S + L S +RE+I + N + ++P + +P FPV
Sbjct: 85 FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEIPSSQPLPSFPVAISD 144
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
+ RK SF++IGE PP + IP WLPAFPDP TY E+P ER SD +KIE +Q+RK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204
Query: 202 MEMSMVNLQRQF----SESGPSSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSVVLPA 257
E ++++LQR+ S P V GD K+ + + E E+ SV
Sbjct: 205 AERALLSLQRKLVCKISSRNP---VWGDMDGVKEEMRDD----------ESELRSVSSGE 251
Query: 258 KLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNRF-CESREEQKNIQLDQRPPVQF 316
K+ + + + +SV+E FAPA+EA ++ F E+ E K +P
Sbjct: 252 KV------------ESLNRDGLSVIEAFAPAMEAARDGFSSEAHTEWKK----NKPVALS 295
Query: 317 KIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
K+ KK L +PL S Q + + +E+ +D+R+
Sbjct: 296 KLRTEKKFLGQPLDLSLQKKGEDRPISFVREEDRDDKRR 334
>gi|356536957|ref|XP_003536998.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Glycine max]
Length = 356
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 173/343 (50%), Gaps = 28/343 (8%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
DDF +A A++AVAQ+C+ GF SAL AD+AVRY+ +G+ A +AN +GR +
Sbjct: 11 DDFGRAAARLAVAQLCDAAGFHGATASALDAFADVAVRYLLDLGRTAESHANHAGRTQCT 70
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATD-VPFAYAIPHFPVVK 142
VFD +G+EDL + F+GA G +RE+I + A D +PFA +I +FPVV+
Sbjct: 71 VFDAIRGMEDLEAPRAFAGA----------GGIREIINFVESAADEIPFAQSISNFPVVQ 120
Query: 143 DRKP-KSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
+R+ SF Q+GE PP + IPAWLPA PD TY +P +ER SD +KIE +Q+RK
Sbjct: 121 ERRRIIPSFDQMGEAPPAKHIPAWLPALPDSHTYIHTPVWDERVSDPREDKIEQARQRRK 180
Query: 202 MEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNP---FLSAPLHFEEKEVSSVVLPAK 258
E R + S + K T ++P L + ++ + K
Sbjct: 181 AE-------RSLLSLQKRLLLRNGSVESKATTSASPNSAALDPQVVGDDDDKVVEKDVEK 233
Query: 259 LSKEVALQNPVAKKHVVDNHISVMETFAPALEAM-KNRFCESR-----EEQKNIQLDQRP 312
+ K L + +SV+E F PA++ + C+ E++K+ RP
Sbjct: 234 VVKVSVLDDDGGGAGGDGKRVSVLEAFGPAIKMLGSGGLCDEDDDGLGEKEKSELPVVRP 293
Query: 313 PVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
V FK GKK + + L + D + +E+E D++K
Sbjct: 294 TVHFKFKTGKKLIGESLDMRNRKKDALRTAALAGREDERDDKK 336
>gi|125544786|gb|EAY90925.1| hypothetical protein OsI_12539 [Oryza sativa Indica Group]
Length = 393
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 189/358 (52%), Gaps = 46/358 (12%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
DF +A+A+ AVA++ E GF +SA+ L D+ +RYI +G+AA F+ANL+GRA N
Sbjct: 47 DFGRAVARAAVARMLEAAGFACAHRSAVDALVDVLLRYICQLGRAATFHANLAGRAAANE 106
Query: 85 FDIFQGLEDL--GLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFA-YAIPHFPVV 141
D+ Q LE+ AS CLA+S +V+++ + + + PFA +P FPV
Sbjct: 107 CDVIQFLEECGAAYYGFAGAASVSARCLANSAVVKDMAVFVGASKESPFAGRPLPRFPV- 165
Query: 142 KDRKP---KSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQ 198
R P +SF +G E + +P WLPAFP+P TY S +E + + +++E +Q
Sbjct: 166 -QRVPLHSTTSFAALGRESGMSHVPEWLPAFPEPHTYVRSELWSEEVAKAGADEVERARQ 224
Query: 199 QRKMEMSMVNLQRQFSESGPSSFVHG----DSSKEK--KTVES--NPFLSAPLHFEEKEV 250
+RK E S+++LQR+ + +G F G D+ K VES NPF L + EK V
Sbjct: 225 RRKAEKSLLSLQRRLALAGADGFRPGMLVDDAVKANGLDVVESKANPFHERALPYGEKVV 284
Query: 251 SSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMK-NRFCESREE------- 302
S V +P V SV+E FAPA E K F E ++
Sbjct: 285 SEVTMPG-----------------VGKTFSVVEAFAPAFEESKGGEFDEGMDQGQNDSQT 327
Query: 303 QKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERKGDLKI 360
QK + +RPPV F+IG+ KKS+V L S + + K DPWF KE++ E++ +L +
Sbjct: 328 QKRVVPKERPPVYFRIGIDKKSMVMALNS--RALVELK-DPWFFKEDK--EQRAELIL 380
>gi|50582683|gb|AAT78753.1| hypothetical protein [Oryza sativa Japonica Group]
gi|50838909|gb|AAT81670.1| putative glycine rich protein [Oryza sativa Japonica Group]
gi|108709714|gb|ABF97509.1| Bromodomain associated family protein, expressed [Oryza sativa
Japonica Group]
Length = 390
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 189/358 (52%), Gaps = 46/358 (12%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
DF +A+A+ AVA++ E GF +SA+ L D+ +RYI +G+AA F+ANL+GRA N
Sbjct: 44 DFGRAVARAAVARMLEAAGFVCAHRSAVDALVDVLLRYICQLGRAATFHANLAGRAAANE 103
Query: 85 FDIFQGLEDL--GLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFA-YAIPHFPVV 141
D+ Q LE+ AS CLA+S +V+++ + + + PFA +P FPV
Sbjct: 104 CDVIQFLEECGAAYYGFAGAASVSARCLANSAVVKDMAVFVGASKESPFAGRPLPRFPV- 162
Query: 142 KDRKP---KSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQ 198
R P +SF +G E + +P WLPAFP+P TY S +E + + +++E +Q
Sbjct: 163 -QRVPLHSTTSFAVLGRESGMSHVPEWLPAFPEPHTYVRSELWSEEVAKAGADEVERARQ 221
Query: 199 QRKMEMSMVNLQRQFSESGPSSFVHG----DSSKEK--KTVES--NPFLSAPLHFEEKEV 250
+RK E S+++LQR+ + +G F G D+ K VES NPF L + EK V
Sbjct: 222 RRKAEKSLLSLQRRLALAGADGFRPGMLVDDAVKANGLDVVESKANPFHERALPYGEKAV 281
Query: 251 SSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMK-NRFCESREE------- 302
S V +P V SV+E FAPA E K F E ++
Sbjct: 282 SEVTMPG-----------------VGKTFSVVEAFAPAFEESKGGEFDEGMDQGQNDSQT 324
Query: 303 QKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERKGDLKI 360
QK + +RPPV F+IG+ KKS+V L S + + K DPWF KE++ E++ +L +
Sbjct: 325 QKRVVPKERPPVYFRIGIDKKSMVMALNS--RALVELK-DPWFFKEDK--EQRAELIL 377
>gi|449482588|ref|XP_004156336.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Cucumis sativus]
Length = 315
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 171/357 (47%), Gaps = 64/357 (17%)
Query: 1 MSDGGGESGSKHQ-QPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIA 59
MS GGG +++ Q R+ GDDF + ++K+A AQIC+ +GFQ ++SA+ LA+I
Sbjct: 1 MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
Query: 60 VRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVREL 119
+ Y L DLG S ++E+
Sbjct: 61 IVY----------------------------LSDLG-----------------SRTIQEI 75
Query: 120 IQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESP 179
+Y N ++PFA +P FP++K K SF+Q+ E PP + IP WLPAFPDP TY +P
Sbjct: 76 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 135
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFL 239
N+R +D T+KIE +Q+RK E S+++LQ++ + G+ +E + +SN
Sbjct: 136 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNT------GNLEEELPSFDSNTPH 189
Query: 240 SAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNR-FCE 298
L E VS V K S + D+ V+E FAPA+EA+K F +
Sbjct: 190 DIELQPRENVVSVVKSSLKHS-----------DNDFDDSSHVLEAFAPAIEAVKGSGFYD 238
Query: 299 SREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
E K RP VQFK GKK L L + Q G+ +++E D++K
Sbjct: 239 DEEGVKKALPIVRPVVQFKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKK 295
>gi|449451217|ref|XP_004143358.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Cucumis sativus]
Length = 315
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 171/357 (47%), Gaps = 64/357 (17%)
Query: 1 MSDGGGESGSKHQ-QPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIA 59
MS GGG +++ Q R+ GDDF + ++K+A AQIC+ +GFQ ++SA+ LA+I
Sbjct: 1 MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
Query: 60 VRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVREL 119
+ Y L DLG S ++E+
Sbjct: 61 IVY----------------------------LSDLG-----------------SRTIQEI 75
Query: 120 IQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESP 179
+Y N ++PFA +P FP++K K SF+Q+ E PP + IP WLPAFPDP TY +P
Sbjct: 76 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 135
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFL 239
N+R +D T+KIE +Q+RK E S+++LQ++ + G+ +E + +SN
Sbjct: 136 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNT------GNLEEELPSFDSNTPH 189
Query: 240 SAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVVDNHISVMETFAPALEAMKNR-FCE 298
L E VS V K S + D+ V+E FAPA+EA+K F +
Sbjct: 190 DIELQPRENVVSVVKSSLKHS-----------DNDFDDSSHVLEAFAPAIEAVKGSGFYD 238
Query: 299 SREEQKNIQLDQRPPVQFKIGVGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERK 355
E K RP VQFK GKK L L + Q G+ +++E D++K
Sbjct: 239 DEEGVKKALPIVRPLVQFKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKK 295
>gi|125587060|gb|EAZ27724.1| hypothetical protein OsJ_11672 [Oryza sativa Japonica Group]
Length = 315
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 168/339 (49%), Gaps = 57/339 (16%)
Query: 38 ICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD 97
+ E GF +SA+ L D+ +RYI +G+AA F+ANL+GRA N D+ Q LE+ G
Sbjct: 1 MLEAAGFVCAHRSAVDALVDVLLRYICHLGRAATFHANLAGRAAANECDVIQFLEECGAA 60
Query: 98 QGFSGA--SDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE 155
S CLA+S +V+++ + + + PFA +P +
Sbjct: 61 YYGFAGAASVSARCLANSAVVKDMAVFVGASKESPFAG-----------RP------LPR 103
Query: 156 EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSE 215
E + +P WLPAFP+P TY S +E + + +++E +Q+RK E S+++LQR+ +
Sbjct: 104 ESGMSHVPEWLPAFPEPHTYVRSELWSEEVAKAGADEVERARQRRKAEKSLLSLQRRLAL 163
Query: 216 SGPSSFVHG----DSSKEK--KTVES--NPFLSAPLHFEEKEVSSVVLPAKLSKEVALQN 267
+G F G D+ K VES NPF L + EK VS V +P
Sbjct: 164 AGADGFRPGMLVDDAVKANGLDVVESKANPFHERALPYGEKAVSEVTMPG---------- 213
Query: 268 PVAKKHVVDNHISVMETFAPALEAMK-NRFCESREE-------QKNIQLDQRPPVQFKIG 319
V SV+E FAPA E K F E ++ QK + +RPPV F+IG
Sbjct: 214 -------VGKTFSVVEAFAPAFEESKGGEFDEGMDQGQNDSQTQKRVVPKERPPVYFRIG 266
Query: 320 VGKKSLVKPLKSSPQNMDGGKIDPWFCKENENDERKGDL 358
+ KKS+V L S + + K DPWF KE++ E++ +L
Sbjct: 267 IDKKSMVMALNS--RALVELK-DPWFFKEDK--EQRAEL 300
>gi|115454053|ref|NP_001050627.1| Os03g0603300 [Oryza sativa Japonica Group]
gi|113549098|dbj|BAF12541.1| Os03g0603300, partial [Oryza sativa Japonica Group]
Length = 279
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 139/271 (51%), Gaps = 44/271 (16%)
Query: 108 HCLASSGIVRELIQYANEATDVPFA-YAIPHFPVVKDRKP---KSSFLQIGEEPPIEDIP 163
CLA+S +V+++ + + + PFA +P FPV R P +SF +G E + +P
Sbjct: 18 RCLANSAVVKDMAVFVGASKESPFAGRPLPRFPV--QRVPLHSTTSFAVLGRESGMSHVP 75
Query: 164 AWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVH 223
WLPAFP+P TY S +E + + +++E +Q+RK E S+++LQR+ + +G F
Sbjct: 76 EWLPAFPEPHTYVRSELWSEEVAKAGADEVERARQRRKAEKSLLSLQRRLALAGADGFRP 135
Query: 224 G----DSSKEK--KTVES--NPFLSAPLHFEEKEVSSVVLPAKLSKEVALQNPVAKKHVV 275
G D+ K VES NPF L + EK VS V +P V
Sbjct: 136 GMLVDDAVKANGLDVVESKANPFHERALPYGEKAVSEVTMPG-----------------V 178
Query: 276 DNHISVMETFAPALEAMK-NRFCESREE-------QKNIQLDQRPPVQFKIGVGKKSLVK 327
SV+E FAPA E K F E ++ QK + +RPPV F+IG+ KKS+V
Sbjct: 179 GKTFSVVEAFAPAFEESKGGEFDEGMDQGQNDSQTQKRVVPKERPPVYFRIGIDKKSMVM 238
Query: 328 PLKSSPQNMDGGKIDPWFCKENENDERKGDL 358
L S + + K DPWF KE++ E++ +L
Sbjct: 239 ALNS--RALVELK-DPWFFKEDK--EQRAEL 264
>gi|384248464|gb|EIE21948.1| hypothetical protein COCSUDRAFT_66754 [Coccomyxa subellipsoidea
C-169]
Length = 624
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 115/225 (51%), Gaps = 25/225 (11%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++S+AIA+V VAQ+ + GF+ Q SA LAD+ +R++ +G A++ YA L+ R N+
Sbjct: 4 EYSRAIARVIVAQMAQGAGFERLQASAHESLADLLMRFVAELGTASHSYAELACRTSTNL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ ED+G+ + +LIQYAN +VPFA + +PV K
Sbjct: 64 SDVLLAFEDMGVR------------------MEDLIQYANAEEEVPFACPVAKYPVSKRP 105
Query: 145 KPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEM 204
+F EEPP+ +P +LPAFPD TY +P+ D+ ++ +RK E
Sbjct: 106 VTLPTFADRKEEPPMH-VPEYLPAFPDKHTYVATPAYAAHEKDARKQRAAADAAKRKAET 164
Query: 205 SMVNLQRQFSESGPSSFVHGDSSKEKKT------VESNPFLSAPL 243
++V L ++ + ++ S+ +K ++NPFL PL
Sbjct: 165 ALVKLHQRQTALEAANAAAEPSAAAEKVGAPVLGADTNPFLLQPL 209
>gi|224134360|ref|XP_002321800.1| predicted protein [Populus trichocarpa]
gi|222868796|gb|EEF05927.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 88/158 (55%), Gaps = 9/158 (5%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
D++ I K AV+QIC+ VGF++ Q SAL L IA Y+ ++ K A Y+N S R + N+
Sbjct: 36 DYAFKITKTAVSQICQSVGFKSTQLSALETLTHIATLYLQTLAKTAVSYSNASNRTQSNI 95
Query: 85 FDIFQGLEDLGLDQGFSGASDINHC------LASSGIVRELIQYANEATDVPFAYAIPHF 138
FDI L D+ QGF+G S + HC L SG+ +++ + + ++PFA IP
Sbjct: 96 FDIINSLHDMSSVQGFTGGSTL-HCSSGGIGLLRSGVFKDIKSFVEFSDEIPFAKPIPRG 154
Query: 139 PVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
+ R+ S L+I E + IP WLP FPD +Y
Sbjct: 155 NSISLRR-NSIPLEIDELDSRGLHIPRWLPRFPDETSY 191
>gi|242066286|ref|XP_002454432.1| hypothetical protein SORBIDRAFT_04g030870 [Sorghum bicolor]
gi|241934263|gb|EES07408.1| hypothetical protein SORBIDRAFT_04g030870 [Sorghum bicolor]
Length = 247
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 29 AIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIF 88
A++ V+ AQI G+ + +AL L+DIA RYI S+G+ A +A GR E NV D
Sbjct: 18 AVSTVSTAQILRSSGYSAAEPAALRALSDIAGRYIASLGRTAAAFAEARGRTEPNVADAV 77
Query: 89 QGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHF-PVVKDRKPK 147
LED L GF GASD L SG + EL Q+ +VPFA +P P
Sbjct: 78 LALEDHALG-GFPGASDPTRPLLCSGALAELAQFVAAVREVPFAKPLPRRDPGCGSSDGW 136
Query: 148 SSFLQIGEEPPIEDIPAWLPAFPD 171
SF G EPP+ +P WLP FP+
Sbjct: 137 ESFAAAGREPPLRHVPQWLPCFPE 160
>gi|255578564|ref|XP_002530144.1| conserved hypothetical protein [Ricinus communis]
gi|223530343|gb|EEF32236.1| conserved hypothetical protein [Ricinus communis]
Length = 257
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 14 QPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFY 73
+ H+ + DF I K++V+QIC+ VGF++ Q SAL L IA Y+ ++ KA+ Y
Sbjct: 11 ETHSPKATDPSDFPFQITKISVSQICQSVGFKSTQLSALETLTHIATLYLKNLAKASASY 70
Query: 74 ANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHC---LASSGIVRELIQYANEATDVP 130
++ S R + NVFDI L DL QGF+GAS +++ L+SS +V++L + N ++P
Sbjct: 71 SSASNRTQSNVFDIINALHDLSSIQGFTGASTLHYTSNILSSSRVVKDLSVFVNSIVEIP 130
Query: 131 FAYAIPHFPVVKDRKPKSSFLQIG-EEPPIEDIPAWLPAFPD 171
FA IP V R+ +G E ++ IP WLP FPD
Sbjct: 131 FAKPIPRVNPVPPRR------SLGLESTSMQHIPKWLPRFPD 166
>gi|297721527|ref|NP_001173126.1| Os02g0699950 [Oryza sativa Japonica Group]
gi|41052666|dbj|BAD07513.1| unknown protein [Oryza sativa Japonica Group]
gi|41052974|dbj|BAD07884.1| unknown protein [Oryza sativa Japonica Group]
gi|255671189|dbj|BAH91855.1| Os02g0699950 [Oryza sativa Japonica Group]
Length = 239
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
A+++V+ AQI G+ + +AL L+DIA RY+ S+G+AA+ A GR E N+
Sbjct: 19 LQDAVSRVSTAQILHSSGYTAAEPAALRALSDIAGRYVASLGRAASAIAEARGRTEPNLA 78
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
D+ LED L GF GASD + SG + EL + +VPF +P K
Sbjct: 79 DLTLALEDHALG-GFPGASDPARPVLRSGALSELAGFVRVVREVPFPKPVPRRGGAPRGK 137
Query: 146 PKSSFLQIGEEPPIEDIPAWLPAFPD 171
SF G+EPP + +P WLP FPD
Sbjct: 138 AWESFAAAGKEPPPKHVPRWLPRFPD 163
>gi|218191412|gb|EEC73839.1| hypothetical protein OsI_08585 [Oryza sativa Indica Group]
Length = 294
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
A+++V+ AQI G+ + +AL L+DIA RY+ S+G+AA+ A GR E N+
Sbjct: 19 LQDAVSRVSTAQILHSSGYTAAEPAALRALSDIAGRYVASLGRAASAIAEARGRTEPNLA 78
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
D+ LED L GF GASD + SG + EL + +VPF +P K
Sbjct: 79 DLTLALEDHALG-GFPGASDPARPVLRSGALSELAGFVRVVREVPFPKPVPRRGGAPRGK 137
Query: 146 PKSSFLQIGEEPPIEDIPAWLPAFPD 171
SF G+EPP + +P WLP FPD
Sbjct: 138 AWESFAAAGKEPPPKHVPRWLPRFPD 163
>gi|357462277|ref|XP_003601420.1| hypothetical protein MTR_3g080510 [Medicago truncatula]
gi|355490468|gb|AES71671.1| hypothetical protein MTR_3g080510 [Medicago truncatula]
gi|388521311|gb|AFK48717.1| unknown [Medicago truncatula]
Length = 318
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 14/162 (8%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
+FS AIAK AV+QIC VG++ + +AL L ++ +YI ++ ++A +AN S R E N
Sbjct: 41 EFSFAIAKTAVSQICRSVGYKRSKFNALEALTNVTTKYIEAIARSAASFANASNRTESNF 100
Query: 85 FDIFQGLEDLGLDQGFSGASDINHC-LASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
FD+ G+ DL +GF+G S + L S ++E++ + + VPF+ IP V
Sbjct: 101 FDLINGIHDLCSVRGFTGGSKTHKSNLLKSAALKEIVDFVKFSNQVPFSKPIPSKNVCGS 160
Query: 144 RKPKSSFLQIGEEPPIE----------DIPAWLPAFPDPQTY 175
+ P+ + I PI IP WLP FP Y
Sbjct: 161 QNPE---ITIESGTPIYCSENTKTQGLHIPRWLPDFPSESLY 199
>gi|356551978|ref|XP_003544349.1| PREDICTED: probable polyamine oxidase 4-like [Glycine max]
Length = 741
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 83/147 (56%), Gaps = 2/147 (1%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
+FS AIAK AVAQIC+ VG++ + AL L +++ RY+ ++ ++A+ +AN S R + N+
Sbjct: 37 EFSFAIAKTAVAQICQSVGYKISKHHALEALTNVSTRYMEAIVRSASSFANASNRTDSNL 96
Query: 85 FDIFQGLEDLGLDQGFSGASDINHC-LASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
FD+ G+ DL GF G S I+ L S ++E++ + N + +PFA IP F V +
Sbjct: 97 FDLINGIHDLCSVLGFPGGSMIHKSNLLGSSALKEIMNFVNLSNKIPFAKPIP-FRNVSE 155
Query: 144 RKPKSSFLQIGEEPPIEDIPAWLPAFP 170
S + IP WLP FP
Sbjct: 156 VTIDSGTSMCLSKQAKTHIPRWLPDFP 182
>gi|15221656|ref|NP_174409.1| Bromodomain transcription factor [Arabidopsis thaliana]
gi|4512621|gb|AAD21690.1| F28K20.20 [Arabidopsis thaliana]
gi|33589802|gb|AAQ22667.1| At1g31240 [Arabidopsis thaliana]
gi|110738744|dbj|BAF01296.1| hypothetical protein [Arabidopsis thaliana]
gi|332193210|gb|AEE31331.1| Bromodomain transcription factor [Arabidopsis thaliana]
Length = 277
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 27/196 (13%)
Query: 11 KHQQPHTKRKF---------SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVR 61
K ++ ++K KF S +FS ++ K+AV+QIC+ +G++ SAL L +
Sbjct: 2 KRRRRNSKLKFEETSDQSPTSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTK 61
Query: 62 YINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQG--FSGASDIN----HCLASSGI 115
++ S+ + A+ ++N + R E N+FDI GL+D+ L F G S ++ CL S +
Sbjct: 62 FLQSLAELASSFSNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAV 121
Query: 116 VRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSF------LQIGEEPPIEDIPAWLPAF 169
+R L + A ++PFA +P R+ SF + + + +PAWLP F
Sbjct: 122 LRNLSDFVTYAPEIPFAKPLPR------RERDGSFGGDLDHVAVTRSVDVTSVPAWLPPF 175
Query: 170 PDPQTYFESPSQNERA 185
PD + S++ R+
Sbjct: 176 PDSSLCSDRCSKDNRS 191
>gi|6692136|gb|AAF24601.1|AC007654_17 T19E23.2 [Arabidopsis thaliana]
Length = 314
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 27/196 (13%)
Query: 11 KHQQPHTKRKF---------SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVR 61
K ++ ++K KF S +FS ++ K+AV+QIC+ +G++ SAL L +
Sbjct: 39 KRRRRNSKLKFEETSDQSPTSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTK 98
Query: 62 YINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQG--FSGASDIN----HCLASSGI 115
++ S+ + A+ ++N + R E N+FDI GL+D+ L F G S ++ CL S +
Sbjct: 99 FLQSLAELASSFSNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAV 158
Query: 116 VRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSF------LQIGEEPPIEDIPAWLPAF 169
+R L + A ++PFA +P R+ SF + + + +PAWLP F
Sbjct: 159 LRNLSDFVTYAPEIPFAKPLPR------RERDGSFGGDLDHVAVTRSVDVTSVPAWLPPF 212
Query: 170 PDPQTYFESPSQNERA 185
PD + S++ R+
Sbjct: 213 PDSSLCSDRCSKDNRS 228
>gi|302831766|ref|XP_002947448.1| hypothetical protein VOLCADRAFT_116371 [Volvox carteri f.
nagariensis]
gi|300267312|gb|EFJ51496.1| hypothetical protein VOLCADRAFT_116371 [Volvox carteri f.
nagariensis]
Length = 332
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 20/221 (9%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
+++S+ IA+V AQ+ E GF+ Q+SA+ LA++ ++YI V AA+ YA + R +
Sbjct: 2 AEEYSRCIARVVAAQMAELTGFEAAQESAIEVLAELMIKYIQEVCTAAHSYAETAHRTDF 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIP-HFPVV 141
N+ D+ L D+G + D+ L + L + + D F + +P +PV
Sbjct: 62 NICDLNLALSDMG-----TSMDDLRKYLETW-----LAEQGPGSFDQGFVHPLPSEYPVR 111
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
+ S+ + EEPP IP+WLPAFPD TY +P+ D + + + +R+
Sbjct: 112 APGRSLPSWEERREEPPAH-IPSWLPAFPDRHTYVRAPAFPGHEEDPVKQSEIIRQTRRQ 170
Query: 202 MEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFLSAP 242
+ +N ++Q P V SNPFLS P
Sbjct: 171 AAKTTLNFKQQLLAVPP--------HPSDVVVGSNPFLSIP 203
>gi|194708228|gb|ACF88198.1| unknown [Zea mays]
gi|413923575|gb|AFW63507.1| hypothetical protein ZEAMMB73_908965 [Zea mays]
Length = 263
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 29 AIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIF 88
AI+ V+ AQI G+ + +AL L+DIA RYI S+G AA +A GR E NV D
Sbjct: 18 AISTVSTAQILRSSGYSAAEPAALRALSDIAGRYIASLGHAAAAFAEARGRTEPNVTDAV 77
Query: 89 QGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHF-PVVKDRKPK 147
LED L GF GA+D L SG + EL Q+ +VPF +P P
Sbjct: 78 LALEDHALG-GFPGAADPTRPLLCSGALAELAQFVAAVREVPFPKPLPRRDPGCGSVDGW 136
Query: 148 SSFLQIGEEPPIEDIPAWLPAFPD 171
SF G +PP+ +P WLP FP+
Sbjct: 137 ESFAAAGRQPPLNHVPHWLPCFPE 160
>gi|224115430|ref|XP_002332133.1| predicted protein [Populus trichocarpa]
gi|222875183|gb|EEF12314.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
D+ I K AV+QIC+ VGF+T Q SAL L +A + ++ K A Y+N S R + N+
Sbjct: 2 DYVFKITKTAVSQICQSVGFKTTQLSALETLTHVATLCLQTLAKTAVLYSNASNRTQSNI 61
Query: 85 FDIFQGLEDLGLDQGFSGASDINHC------LASSGIVRELIQYANEATDVPFAYAIPHF 138
FDI L D+ +GF+G S + HC L S + + + + + ++PFA IP
Sbjct: 62 FDIINSLHDMYSVRGFTGGSTL-HCNSSGMSLLRSSVFKNIKSFVEFSDEIPFAKPIPRG 120
Query: 139 PVVKDRKPKSSFLQIGEEPPIE---------DIPAWLPAFPDPQTYFESPSQNER 184
+ R+ P+E IP WLP PD +Y + + E+
Sbjct: 121 ESISLRR---------NSIPLELNKLGSRGLHIPRWLPRCPDESSYNKCADRCEK 166
>gi|226501222|ref|NP_001144446.1| uncharacterized protein LOC100277408 [Zea mays]
gi|195642258|gb|ACG40597.1| hypothetical protein [Zea mays]
gi|413923576|gb|AFW63508.1| hypothetical protein ZEAMMB73_908965 [Zea mays]
gi|413923577|gb|AFW63509.1| hypothetical protein ZEAMMB73_908965 [Zea mays]
Length = 249
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 29 AIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIF 88
AI+ V+ AQI G+ + +AL L+DIA RYI S+G AA +A GR E NV D
Sbjct: 18 AISTVSTAQILRSSGYSAAEPAALRALSDIAGRYIASLGHAAAAFAEARGRTEPNVTDAV 77
Query: 89 QGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHF-PVVKDRKPK 147
LED L GF GA+D L SG + EL Q+ +VPF +P P
Sbjct: 78 LALEDHALG-GFPGAADPTRPLLCSGALAELAQFVAAVREVPFPKPLPRRDPGCGSVDGW 136
Query: 148 SSFLQIGEEPPIEDIPAWLPAFPD 171
SF G +PP+ +P WLP FP+
Sbjct: 137 ESFAAAGRQPPLNHVPHWLPCFPE 160
>gi|66808731|ref|XP_638088.1| hypothetical protein DDB_G0285493 [Dictyostelium discoideum AX4]
gi|60466532|gb|EAL64584.1| hypothetical protein DDB_G0285493 [Dictyostelium discoideum AX4]
Length = 374
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 100/189 (52%), Gaps = 22/189 (11%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D+F++ + K+ VAQ+ + +GF + Q A LAD+ I +G A+ Y+ LS R + N
Sbjct: 3 DNFARVLCKIVVAQVAKNLGFPSISQIATDFLADVIQLDIQDIGIRAHEYSELSCRTDSN 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPV--- 140
FD+ Q ED+ ++ + EL Q+ ++ ++PFA +P FP+
Sbjct: 63 FFDVKQAFEDMAIN------------------IHELQQFLLQSDEIPFAQVVPPFPLQGS 104
Query: 141 VKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQR 200
V+ S + +E P+ IP++LP+FP+ T+ ++P E +D Y K KQ+R
Sbjct: 105 VEQPSKPSPYKTEEQEFPLH-IPSFLPSFPEKHTFSKTPLYGEVVTDPYKIKKTKNKQKR 163
Query: 201 KMEMSMVNL 209
++E S++ L
Sbjct: 164 QIENSLIKL 172
>gi|224114868|ref|XP_002332302.1| predicted protein [Populus trichocarpa]
gi|222832464|gb|EEE70941.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 25/175 (14%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
D+ I K AV+QIC+ VGF+T Q SAL L +A + ++ K A Y+N S R + N+
Sbjct: 26 DYVFKITKTAVSQICQSVGFKTTQLSALETLTHVATLCLQTLAKTAVLYSNASNRTQSNI 85
Query: 85 FDIFQGLEDLGLDQGFSGASDINHC------LASSGIVRELIQYANEATDVPFAYAIPHF 138
FDI L D+ +GF+G S + HC L S + + + + + ++PFA IP
Sbjct: 86 FDIINSLHDMYSVRGFTGGSTL-HCNSSGMSLLRSSVFKNIKSFVEFSDEIPFAKPIPRG 144
Query: 139 PVVKDRKPKSSFLQIGEEPPIE---------DIPAWLPAFPDPQTYFESPSQNER 184
+ R+ P+E IP WLP PD +Y + + E+
Sbjct: 145 ESISLRR---------NSIPLELNKLGSRGLHIPRWLPRCPDESSYNKCGDRCEK 190
>gi|297846484|ref|XP_002891123.1| hypothetical protein ARALYDRAFT_891076 [Arabidopsis lyrata subsp.
lyrata]
gi|297336965|gb|EFH67382.1| hypothetical protein ARALYDRAFT_891076 [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 10 SKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKA 69
S Q P T +FS FS + K+AV+QIC VG+ SAL L +++ S+ +
Sbjct: 15 SSDQSPATTAEFS---FS--LTKIAVSQICRSVGYIATDTSALNTLTLTTTKFLQSLAEL 69
Query: 70 ANFYANLSGRAEGNVFDIFQGLEDLGLDQG--FSGASDIN----HCLASSGIVRELIQYA 123
A+ ++N + R E N+FDI GL+D+ L F G S ++ HCL S ++R L +
Sbjct: 70 ASSFSNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESHCLIKSAVLRNLSDFV 129
Query: 124 NEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPP------IEDIPAWLPAFPD 171
A ++PFA +P R+ S ++ P ++ +PAWLP FPD
Sbjct: 130 AYAPEIPFAKPLPR------RERDGSLGGDLDQAPVTRSVEVKSVPAWLPPFPD 177
>gi|159466226|ref|XP_001691310.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279282|gb|EDP05043.1| predicted protein [Chlamydomonas reinhardtii]
Length = 311
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
+D+S+ +A+V AQ+ E GF+ Q+SA+ LA++ ++YI V AA+ YA LS R +
Sbjct: 2 AEDYSRRVARVVAAQMAELTGFEAAQESAVEILAELLIKYIQEVCTAAHSYAELSHRTDM 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAI-PHFPVV 141
N+ D+ L D+G + D+ L S + + D F + + P +P+
Sbjct: 62 NICDLNLALGDMG-----TSMDDLRKYLDSW-----IAEQGRGTFDQGFVHPLPPEYPIR 111
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
+ S+ + EE P IP+WLPAFPD TY +P+ D + + + +R+
Sbjct: 112 APGRTLPSWEERREEAPAH-IPSWLPAFPDRHTYVRTPAFPGHEEDPVKQSEVIRQTRRQ 170
Query: 202 MEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFLSAP 242
+ + ++Q P + SNPFLS P
Sbjct: 171 AAKTTLAFKQQLLAVPP--------HPANAAIGSNPFLSVP 203
>gi|413922775|gb|AFW62707.1| hypothetical protein ZEAMMB73_409967 [Zea mays]
Length = 372
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 64/126 (50%), Gaps = 2/126 (1%)
Query: 47 FQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDI 106
+ +AL L+DIA RYI S+G A +A GR E NV D LED L GF GA+D
Sbjct: 238 VRPAALRALSDIAGRYIASLGHTAAAFAEARGRTEPNVTDAVLALEDHALG-GFPGAADP 296
Query: 107 NHCLASSGIVRELIQYANEATDVPFAYAIPHF-PVVKDRKPKSSFLQIGEEPPIEDIPAW 165
L SG + EL Q+ +VPF +P P SF G +PP+ +P W
Sbjct: 297 TRPLLCSGALAELAQFVAAVREVPFPKPLPRRDPGCGSVDGWESFAAAGRQPPLNHVPHW 356
Query: 166 LPAFPD 171
LP FP+
Sbjct: 357 LPCFPE 362
>gi|428162436|gb|EKX31580.1| hypothetical protein GUITHDRAFT_122224 [Guillardia theta CCMP2712]
Length = 326
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
++ + AQ+ E +GFQ QSAL L +I ++YI VG ++ A L+GR + N+
Sbjct: 4 YAAEACRTVAAQLSEAIGFQAVTQSALDTLTEILIKYIEEVGYQSHSLAELAGRTQDNLL 63
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
D+ L+D+G + EL + + ++ +A A FPV + +
Sbjct: 64 DVRSALQDVGT------------------TLPELYLFM-QRNELRYAKAEVRFPVSRPPR 104
Query: 146 PKSSFLQIGEEPPIEDIPAWLPAFPDPQTYF-ESPSQNERASDSYTEKIELGKQQRKMEM 204
P+ F Q E +P++LP FP TY S Q ER D+ T K + K+ R++E
Sbjct: 105 PRERFGQEEAEELPPHVPSFLPPFPSKHTYLATSKPQGERG-DAKTAKKQKHKRNRQLEE 163
Query: 205 SMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSVVLPAKLSKEVA 264
++ L D+ K+K+ + P ++++ +V ++S+E
Sbjct: 164 ALQKL--------------ADAPKKKRKAQET--FGEPEAEQQRDDEGIVTEKEVSEESV 207
Query: 265 LQNPVAKKHVVDNHISVMETFAPALEAMKNRFCESREEQKNIQLDQRPPVQFKIGV 320
+QNP ++ N + + ++EA N + ++ +N R QF + +
Sbjct: 208 MQNPALQEAAKVNDVLADDDVRKSIEAEPNNQEAANKDAENTSTSHR---QFSLSL 260
>gi|325191580|emb|CCA25843.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 318
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 28/245 (11%)
Query: 9 GSKHQQPHTKR-KFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVG 67
G+ H + R K + D FS++IA V+VA + + GF++ QQSA L +I +Y+ +G
Sbjct: 22 GADHDKKQALRQKLTEDSFSRSIALVSVAYVAQNAGFESIQQSAADALVEILEKYVQRIG 81
Query: 68 KAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEAT 127
+A A L+GRA+ D+ Q L D+ I L + +V+ L E
Sbjct: 82 ISAKDNAELAGRAQARATDVMQALHDM-----------IPVPLEVNDLVKAL-----ETC 125
Query: 128 DVPFAYAIPHFPVVKDRKPKSSFLQ--IGEEPPI-EDIPAWLPAFPDPQTY--FESPSQN 182
PF IP FP+ K + Q IG P+ + P + P P QTY + P
Sbjct: 126 KRPFPREIPDFPIQKADANEVVLDQSHIGHCDPLPSNAPTFAPPLPCRQTYSTHKRPVV- 184
Query: 183 ERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPS-----SFVHGDSSKEKKTVESNP 237
+R DS ++ L +Q+ +++ S+ L F + + + ++ +S K NP
Sbjct: 185 DREQDSKRTRLTLLEQKNRVQQSLHGLHVAFEKRAAAMHHEPNILNFQNSNITKIGSENP 244
Query: 238 FLSAP 242
FL AP
Sbjct: 245 FLQAP 249
>gi|330801503|ref|XP_003288766.1| hypothetical protein DICPUDRAFT_79545 [Dictyostelium purpureum]
gi|325081200|gb|EGC34725.1| hypothetical protein DICPUDRAFT_79545 [Dictyostelium purpureum]
Length = 357
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D++++ + K+ VAQI GF + Q A LAD+ YI +G A+ Y+ LS R + N
Sbjct: 3 DNYARVLCKMIVAQIARSNGFHSISQIACDSLADVIQIYIQDIGIRAHEYSELSCRTDSN 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
FD+ Q ED+ +D ++ ++PF +P FP+
Sbjct: 63 FFDVKQSFEDMAIDLQELQQY------------------LLQSDEIPFGQVVPPFPLPTT 104
Query: 144 RKPKSS--FLQIGEEPPIED----IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGK 197
P+ S ++ P +D IP++LP+ P+ T+ ++P E +D Y K K
Sbjct: 105 DSPQKSQYEQYEQQKQPTQDFPLHIPSFLPSPPEKHTFSKTPLYGEVVTDPYKIKKVKNK 164
Query: 198 QQRKMEMSMVNL 209
Q+R++E S++ L
Sbjct: 165 QKRQVENSLIKL 176
>gi|427786637|gb|JAA58770.1| Putative transcription initiation factor tfiid subunit 3
[Rhipicephalus pulchellus]
Length = 1137
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
FS+++ KV+VAQIC+ +G+ QS L LADI RY+ + + A Y+N GR E N+
Sbjct: 5 FSRSVLKVSVAQICQNIGWHAVHQSTLELLADILHRYVLEIARTAQAYSNQDGRTEPNLD 64
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
D+ DLG+ ++ EL +Y N V FA +P FPV +
Sbjct: 65 DLALAFNDLGI------------------VLNELEEYINNVEPVGFAKRVPQFPVAR 103
>gi|167376478|ref|XP_001734015.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904640|gb|EDR29830.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 194
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D F + I K+A AQI G+ ++SAL +AD+ YI +GK + + +GR E +
Sbjct: 7 DSFPRKILKIAAAQIAMSAGYTDAKESALETIADVMEMYIQEIGKKTHQISEHNGRTESS 66
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEAT--DVPFAYAIPHFPVV 141
D+ +E LG+D + + + T D F IP FPV+
Sbjct: 67 FIDLLFAMEQLGID---------------------IFSFGDYVTKEDKLFIDGIPEFPVI 105
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
K Q EE P IP +LP PD +TY +P +R +D + + E K +
Sbjct: 106 KATDEVPIEKQYNEEKPY--IPGFLPPLPDARTYKNTPIYQKRHTDGISLRKEELKVRHL 163
Query: 202 MEMSMVNLQRQFSESGPSSFVHG 224
E +++NL+ + + ++ +G
Sbjct: 164 NEDALINLKNKINGEMKVNYENG 186
>gi|407044812|gb|EKE42838.1| bromodomain associated protein [Entamoeba nuttalli P19]
Length = 194
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D F + I K+A AQI G+ ++SAL +AD+ YI +GK + + +GR E +
Sbjct: 7 DSFPRKILKIAAAQIAMSAGYTDAKESALETIADVMEMYIQEIGKKTHQISEHNGRTESS 66
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEAT--DVPFAYAIPHFPVV 141
D+ +E LG+D + + + T D F IP FPV+
Sbjct: 67 FIDLLFAMEQLGID---------------------IFSFGDYVTKEDKLFIDGIPEFPVI 105
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
K Q EE P IP +LP PD +TY +P +R +D + + E K +
Sbjct: 106 KATDEIPIEKQYNEEKPY--IPGFLPPLPDARTYKNTPIYQKRHTDGISLRKEELKVRHL 163
Query: 202 MEMSMVNLQRQFSESGPSSFVHG 224
E +++NL+ + + ++ +G
Sbjct: 164 NEDALINLKNKINGEMKVNYENG 186
>gi|297741639|emb|CBI32771.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%)
Query: 5 GGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYIN 64
GGE ++ + ++ D+F +A++K+AVAQICE VGF+ FQ SAL L++IAVRY+
Sbjct: 14 GGEDDRRNSDNNAPKRAGPDEFGRAVSKIAVAQICESVGFEGFQDSALQALSNIAVRYLC 73
Query: 65 SVGKAANFYANLSGRAEGNVF 85
VGK ANF ANL+ N F
Sbjct: 74 DVGKTANFCANLADICTDNSF 94
>gi|391345558|ref|XP_003747052.1| PREDICTED: uncharacterized protein LOC100897414 [Metaseiulus
occidentalis]
Length = 782
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 32/167 (19%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
FS + KVAV IC+ +G+ Q++LG L D+ +Y+ + K YAN +GR E N
Sbjct: 5 FSVEVLKVAVGHICQNIGWHNVSQTSLGILVDVLQKYMIELSKCTTSYANAAGRTESNTE 64
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
D+F D GL + REL+ Y +PF +P +P+ ++
Sbjct: 65 DVFLAFRDFGLTE------------------RELLDYMLNVDSLPFPKKLPLYPI--EQA 104
Query: 146 PKSSFLQIGEEPPIEDI--PAWLPAFPDPQTYFESPSQNERASDSYT 190
P F P +D P W+ +P P Q E SD++T
Sbjct: 105 PLLCF------PKTQDPQKPEWI----EPHLPSIRPDQEEETSDAHT 141
>gi|67481923|ref|XP_656311.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56473502|gb|EAL50925.1| hypothetical protein EHI_184680 [Entamoeba histolytica HM-1:IMSS]
gi|449701745|gb|EMD42504.1| bromodomain associated protein [Entamoeba histolytica KU27]
Length = 194
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 25/203 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D F + I K+A AQI G+ ++SAL +AD+ YI +GK + + +GR E +
Sbjct: 7 DSFPRKILKIAAAQIAMSAGYTDAKESALETIADVMEMYIQEIGKKTHQISEHNGRTESS 66
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEAT--DVPFAYAIPHFPVV 141
D+ +E LG+D + + + T D F IP FPV+
Sbjct: 67 FIDLLFAMEQLGID---------------------IFSFGDYVTKEDKLFIDGIPEFPVI 105
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
K Q EE P IP +LP PD +TY +P +R +D + + E K +
Sbjct: 106 KATDEIPIEKQHNEEKPY--IPGFLPPLPDARTYKNTPIYQKRHTDGISLRKEELKVRHL 163
Query: 202 MEMSMVNLQRQFSESGPSSFVHG 224
E +++NL+ + + ++ +G
Sbjct: 164 NEDALINLKNKINGEMKVNYENG 186
>gi|348672737|gb|EGZ12557.1| hypothetical protein PHYSODRAFT_415093 [Phytophthora sojae]
Length = 329
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 42/239 (17%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
SGD F++ ++ ++VA + VGF Q+SA L +I +YI +G AA A L+GR +
Sbjct: 54 SGDLFARNLSVMSVAHVARGVGFDAVQKSAADALTEILAKYIQRIGGAAKDIAELAGRTQ 113
Query: 82 GNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV 141
D+ Q L+DL + +++L++ E PF +P FP
Sbjct: 114 PKATDVVQALQDL---------------EPAPVEIKDLVKTL-ETAKRPFPRDVPAFPAR 157
Query: 142 KDRKPKSSFLQ--IGEE---PPIEDIPAWLPAFPDPQTY-FESPSQNERASDSYTEKIEL 195
K ++ Q IG PP +P++LP P+ TY ES +R D+ ++EL
Sbjct: 158 KRDISGNTIEQAKIGRREGLPP--HVPSFLPPLPNRHTYSSESRLVVDRGQDTKRTRLEL 215
Query: 196 GKQQRKMEMSMVNLQRQFSESGPSSFVH-----------GDSSKEKKTVESNPFLSAPL 243
++ ++ S+ LQ ++ P+ VH GD++ E NPF+ AP+
Sbjct: 216 LSEKAQVRQSLHGLQTAAAKK-PAVIVHQPTWNAFQGSTGDNATE------NPFVQAPI 267
>gi|301093915|ref|XP_002997802.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109888|gb|EEY67940.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 330
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 111/239 (46%), Gaps = 42/239 (17%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
+GD F++ ++ ++VA I VGF Q+SA L +I +YI +G +A A L+GRA+
Sbjct: 69 NGDLFARNLSVMSVAHIARGVGFDAVQKSAADALTEILAKYIQRIGASAKEIAELAGRAQ 128
Query: 82 GNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV 141
D+ Q +DL + +++L++ A E PF +P FP
Sbjct: 129 PKATDVVQAFQDLE---------------PAPVEMKDLVK-ALETAKRPFPRDVPAFPAR 172
Query: 142 KDRKPKSSFLQ--IGEE---PPIEDIPAWLPAFPDPQTY-FESPSQNERASDSYTEKIEL 195
K ++ Q IG PP +P++LP P+ TY +S ER D+ +++EL
Sbjct: 173 KRDISGNTIEQTKIGRRETLPP--HVPSFLPPLPNRHTYSSDSRLVVEREQDTKRQRLEL 230
Query: 196 GKQQRKMEMSMVNLQRQFSESGPSSFVH-----------GDSSKEKKTVESNPFLSAPL 243
++ + S+ LQ + P+ VH GD++ E NPF+ AP+
Sbjct: 231 LSEKAHVRQSLHGLQ-TVAAKKPAVIVHQPTWNAFQGSTGDNATE------NPFVQAPI 282
>gi|440299523|gb|ELP92075.1| hypothetical protein EIN_379420 [Entamoeba invadens IP1]
Length = 199
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 22/189 (11%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
+F + I K+A QI G+ ++S+L L DI YI +GK + + +GR +
Sbjct: 6 EFPRRILKIAAGQIAMSAGYVNAKESSLEALVDIMEMYIQEIGKRTHEISEHNGRTQSTF 65
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ +E LG+D G + RE D F IP FPVVK R
Sbjct: 66 IDMLFAMEQLGVDVFSFGEY----------VTRE---------DKLFIDGIPEFPVVKQR 106
Query: 145 KPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEM 204
P ++ +E P IP +LP PDP+TY + +R D + + E K + + E
Sbjct: 107 -PNVPLSEVDKERPY--IPGFLPELPDPRTYKSTAIYQKRHVDYVSLRKEELKARHENED 163
Query: 205 SMVNLQRQF 213
+++ L+ +
Sbjct: 164 ALIGLKNKI 172
>gi|291225073|ref|XP_002732526.1| PREDICTED: LRRGT00199-like [Saccoglossus kowalevskii]
Length = 1109
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
+ F++++ KV VAQIC+ +G+Q Q + L DI RYI + + + YA R E
Sbjct: 2 AEGFTRSLLKVVVAQICQSLGWQAVQTTPCDLLTDILERYIGKLAETTHSYAEQYNRTEP 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D+ LG+ + EL Y N +PFA+ +P FP VK
Sbjct: 62 NLDDLSYAFRQLGIS------------------IAELEDYTNVVEQIPFAHELPQFPFVK 103
Query: 143 D 143
+
Sbjct: 104 N 104
>gi|307103236|gb|EFN51498.1| hypothetical protein CHLNCDRAFT_140172 [Chlorella variabilis]
Length = 364
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+++ + + GF QQS + LAD+ +RY+ VG ++ YA L+GR+E N D+ L
Sbjct: 11 RISALALIDATGFDVCQQSCVDILADLLLRYVQEVGAGSHHYAELAGRSETNPIDVALAL 70
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
D+ S+G+ +L + +VPF +I FP+ K +P +F+
Sbjct: 71 NDM-----------------STGVA-QLRDF-----EVPFEQSISAFPLRKQSRPAPTFM 107
Query: 152 QIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
+ GE P IP WLPA PD TY +P D ++ L +Q+++ E + V LQ
Sbjct: 108 ERGEA-PPPHIPPWLPALPDRHTYVATPVYPGHEKDPQKRQMLLTEQRQQAETAAVRLQA 166
Query: 212 QFS 214
+ +
Sbjct: 167 RLA 169
>gi|290990241|ref|XP_002677745.1| TAF3 RNA polymerase II [Naegleria gruberi]
gi|284091354|gb|EFC45001.1| TAF3 RNA polymerase II [Naegleria gruberi]
Length = 539
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 1 MSDGGGESGSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAV 60
M + S S+H H D F++ + + ++ C GF + S L D+
Sbjct: 26 MGNNNNTSRSQHPNQH------YDHFAREVLQRVISDTCRYYGFHAIKSSTSDFLIDLVQ 79
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGL-EDLGLDQGFSGASDINHCLASSGIVR-- 117
+I + + Y++ GR E NVFD+ + L +GL DIN L+ I++
Sbjct: 80 MFIQKIATTSVMYSSHCGRTEPNVFDVEKSLNHHMGL--------DINDLLSFFYILQDK 131
Query: 118 ------ELIQYANEATDVPFA-----YAIP--HFPVVKDRKPKSSFL-----QIGEEPPI 159
+L + + D+P A + P HF ++ K KS + E I
Sbjct: 132 SEENSVDLSTFEFDIPDIPKAPLSSLMSCPQTHFHLLYKNKAKSLLFIDEEEEEEHERQI 191
Query: 160 EDI----PAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ----R 211
+ I P +LPA P T+ +P N+R D Y ++E +Q+R +E S+ L +
Sbjct: 192 KLIEQQKPTFLPALPPKHTFRFTPIMNKRTRDQYRIQLEKTRQRRHIEESLTRLHEAELK 251
Query: 212 QFSESGPSSFVHGDS----------SKEKKTVESNPFLSAPLHFEEKEVSSVVLPAKLSK 261
Q + + V+G++ +K+K V+ N L LH E+K ++ VL K +
Sbjct: 252 QVRDLLELNEVNGENASQQLEQLIKTKKKTIVQKNDVL---LHLEKKPTTN-VLTQKKKE 307
Query: 262 EVALQNPVA 270
E A+Q +
Sbjct: 308 EQAIQQSIT 316
>gi|395827493|ref|XP_003786936.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3, partial [Otolemur garnettii]
Length = 1004
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 57 GGGAGERWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 116
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 117 LQQLGRGCHRYSELYGRTDPILDDVSEAFQLMGVS------------------LHELEDY 158
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 159 IHNIEPVTFPHQIPSFPVSKN 179
>gi|260797637|ref|XP_002593808.1| hypothetical protein BRAFLDRAFT_214741 [Branchiostoma floridae]
gi|229279038|gb|EEN49819.1| hypothetical protein BRAFLDRAFT_214741 [Branchiostoma floridae]
Length = 286
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 33 VAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLE 92
VAV+ +C GF T +++AL L ++ YI +G++A Y L+GR E + D+ L
Sbjct: 19 VAVSALCTEGGFGTAEKAALESLTEMLQSYITEMGRSAKQYCELAGRTEPMLTDVTVSLI 78
Query: 93 DLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQ 152
++G +DI A + L A P P RKP S+
Sbjct: 79 EMG--------ADIEGLPAYARRANRLTMTAQPQARTP---GNPKVLQTGTRKPHPSY-- 125
Query: 153 IGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNL 209
+P LPAFPDP TY +P+ ASD + Q+R +E ++
Sbjct: 126 ---------VPEHLPAFPDPHTYIRTPTFRPPASDYQVIRETAASQRRDIERALTRF 173
>gi|49256603|gb|AAH73884.1| TAF3 protein, partial [Homo sapiens]
Length = 601
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 47 GGGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 106
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 107 LQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVS------------------LHELEDY 148
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 149 IHNIEPVTFPHQIPSFPVSKN 169
>gi|38383015|gb|AAH62352.1| TAF3 protein, partial [Homo sapiens]
Length = 771
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 39 GGGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 98
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 99 LQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVS------------------LHELEDY 140
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 141 IHNIEPVTFPHQIPSFPVSKN 161
>gi|260816297|ref|XP_002602908.1| hypothetical protein BRAFLDRAFT_98089 [Branchiostoma floridae]
gi|229288221|gb|EEN58920.1| hypothetical protein BRAFLDRAFT_98089 [Branchiostoma floridae]
Length = 1052
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D F++ + +V VAQIC+ +G+ Q + L DI RY+ V + A+ Y+ GR E
Sbjct: 2 ADPFTRRLLRVCVAQICQTLGWHAVQTTPCEVLTDILHRYLEQVTRTAHRYSEQFGRTEP 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N L+DLGL G D++ L +E+ Y VPFA+ +P FP+
Sbjct: 62 N-------LDDLGLAFG-----DLSMTL------QEMEHYIANVEPVPFAHNLPRFPL-- 101
Query: 143 DRKPKSSFLQIGE 155
PK++ L I E
Sbjct: 102 ---PKNNALNIPE 111
>gi|397515676|ref|XP_003828074.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3 [Pan paniscus]
Length = 1086
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 163 GGGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 222
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 223 LQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVS------------------LHELEDY 264
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 265 IHNIEPVTFPHQIPSFPVSKN 285
>gi|441626275|ref|XP_004089137.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3 [Nomascus leucogenys]
Length = 1057
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 148 GGGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 207
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 208 LQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVS------------------LHELEDY 249
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 250 IHNIEPVTFPHQIPSFPVSKN 270
>gi|390465070|ref|XP_003733337.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3-like [Callithrix jacchus]
Length = 998
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 105 GGGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 164
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 165 LQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVS------------------LHELEDY 206
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 207 IHNIEPVTFPHQIPSFPVSKN 227
>gi|297300462|ref|XP_002808540.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3-like [Macaca mulatta]
Length = 1116
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 167 GGGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 226
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 227 LQQLGRGCHRYSELYGRTDPVLDDVGEAFQLMGVS------------------LHELEDY 268
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 269 IHNIEPVTFPHQIPSFPVSKN 289
>gi|440792079|gb|ELR13307.1| hypothetical protein ACA1_238410 [Acanthamoeba castellanii str.
Neff]
Length = 302
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 40/192 (20%)
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
I VG A+ YA L+GR E N D+ ++LGLD +REL Y
Sbjct: 11 IEEVGHRAHLYAELAGRIEANFNDVRLTFDELGLD------------------LRELSHY 52
Query: 123 ANEATDVPF------------AYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFP 170
+ + PF + A+P +PV K + + L+ EEP IP +LPAFP
Sbjct: 53 SATLDETPFPKGTRAPLHPPSSLAMPEWPVKKKKGRAAPGLKDPEEPLPPHIPPFLPAFP 112
Query: 171 DPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEK 230
Y SP+ ER D+ + K++R++E ++ L + + +++ H D
Sbjct: 113 SKHAYIASPAYQERLEDATEVRRLRSKRRRQVEAAVTRLADHIAIAPITTYDHAD----- 167
Query: 231 KTVESNPFLSAP 242
NPFL P
Sbjct: 168 -----NPFLQRP 174
>gi|291225372|ref|XP_002732682.1| PREDICTED: TBP-associated factor 8-like [Saccoglossus kowalevskii]
Length = 290
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 88/196 (44%), Gaps = 27/196 (13%)
Query: 33 VAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLE 92
VA +C VGF + AL L ++ YI +G++A Y LSGR E + D+ L
Sbjct: 19 TCVAALCCDVGFHEADKIALETLTEMIQSYITELGRSAQTYCELSGRTEPMLNDVAVSLI 78
Query: 93 DLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQ 152
++G D LA+ L +A ++ V P V R LQ
Sbjct: 79 EMGTD------------LAA------LTMHAKKSQRVLIQPQEQMRPPVTPR-----ILQ 115
Query: 153 IGEEPP-IEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
GE+ P IP +LP+FPDP TY ++PS ++ + + Q+R +E + L R
Sbjct: 116 AGEKKPHPSHIPDYLPSFPDPHTYIKTPSYRRPETEYQAIREQAASQRRDVERA---LTR 172
Query: 212 QFSESGPSSFVHGDSS 227
+++G + + D S
Sbjct: 173 FVAKTGETHTLFPDDS 188
>gi|348512811|ref|XP_003443936.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Oreochromis niloticus]
Length = 943
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +++++ +V+VAQIC+ +G+ Q +A L+D+ RYI +G+ + Y+ L GR +
Sbjct: 3 ESYARSLLRVSVAQICQALGWDAVQLTACDLLSDVLHRYIQQLGRVCHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q LG+ + EL Y N VPF++ P +PV K+
Sbjct: 63 LDDVSQAFRLLGVS------------------LSELEDYVNNLEPVPFSHQTPLYPVSKN 104
>gi|426363961|ref|XP_004065506.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3 [Gorilla gorilla gorilla]
Length = 1085
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 20/141 (14%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
G +G + QQ R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY
Sbjct: 154 GSGAGEQWQQGLRWRPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRY 213
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQY 122
+ +G+ + Y+ L GR + + D+ + + +G+ + EL Y
Sbjct: 214 LQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVS------------------LHELEDY 255
Query: 123 ANEATDVPFAYAIPHFPVVKD 143
+ V F + IP FPV K+
Sbjct: 256 IHNIEPVTFPHQIPSFPVSKN 276
>gi|115711961|ref|XP_797041.2| PREDICTED: uncharacterized protein LOC592424 [Strongylocentrotus
purpuratus]
Length = 1047
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 23/150 (15%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D F QA+ ++++AQIC+ +G+ + + L D+ RYI + ++ YA GR E
Sbjct: 2 ADGFCQALLRISMAQICQELGWHSIHSTPCDLLTDVLQRYIQQLATVSHCYAEQYGRTEP 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
NV +DLGL G S + EL Y + +PF + IP FP+ +
Sbjct: 62 NV-------DDLGLTFRQMGVS-----------LYELENYIRDVDPIPFKHDIPQFPLRR 103
Query: 143 D---RKPKSSFLQIGEEPPIEDIPAWLPAF 169
+ + PK E ++ IPA LP
Sbjct: 104 ENDLQHPKPGSRDDRER--LQYIPAHLPPI 131
>gi|68533568|gb|AAH98542.1| Taf3 protein [Danio rerio]
Length = 658
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ F++++ +V+VAQ+C+ VG+ Q SA L+D+ RY+ + K+ + Y+ L GR +
Sbjct: 3 ESFARSLLRVSVAQMCQAVGWDAVQLSACDLLSDVLERYVQQLAKSCHRYSELYGRTDPG 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q GF G S + EL Y N + + IP FP+
Sbjct: 63 LSDVDQAF-------GFLGVS-----------IAELEDYVNNVEPIGYPQTIPQFPIS-- 102
Query: 144 RKPKSSFLQ 152
KSS LQ
Sbjct: 103 ---KSSVLQ 108
>gi|124481645|gb|AAI33111.1| Taf3 protein [Danio rerio]
Length = 569
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ F++++ +V+VAQ+C+ VG+ Q SA L+D+ RY+ + K+ + Y+ L GR +
Sbjct: 3 ESFARSLLRVSVAQMCQAVGWDAVQLSACDLLSDVLERYVQQLAKSCHRYSELYGRTDPG 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q GF G S + EL Y N + + IP FP+
Sbjct: 63 LSDVDQAF-------GFLGVS-----------IAELEDYVNNVEPIGYPQTIPQFPIS-- 102
Query: 144 RKPKSSFLQ 152
KSS LQ
Sbjct: 103 ---KSSVLQ 108
>gi|307171663|gb|EFN63415.1| Transcription initiation factor TFIID subunit 3 [Camponotus
floridanus]
Length = 959
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 18/119 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++S+ I K+ VAQIC+ +G+ + + L + D+ Y+ V + + YA + GR E N+
Sbjct: 4 EYSRNILKIVVAQICQMIGWHSINSTPLEFMVDLMQEYLLRVSRLTHQYAEVLGRTEPNL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
D+ + + +D ++ELI+Y +P+ IP +PV ++
Sbjct: 64 DDLGLTFQHMNID------------------IQELIEYVKNVDSIPYPIQIPQYPVRRE 104
>gi|395840595|ref|XP_003793140.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Otolemur garnettii]
Length = 904
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D++++++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + + L GR
Sbjct: 3 DNYARSLLRVSVAQICQVLGWDSVQLSACDLLTDVLERYLQQLGRGCHRSSELHGRTHPT 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ +G + +G+ ++EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEGFQLMGVS------------------LQELEDYVDNIEPVAFPHRIPSFPVSKN 104
>gi|443723917|gb|ELU12136.1| hypothetical protein CAPTEDRAFT_39082, partial [Capitella teleta]
Length = 129
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
FS+ + +VAVAQIC+ +G+ Q S + + D+ RY+ +GK + Y GR E N
Sbjct: 5 FSRHVLRVAVAQICQSLGWNAVQTSPMELMTDVLERYLLELGKYTHRYCEQFGRTEPN-- 62
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
L+DLGL G S V EL Y +PFA +P FPV
Sbjct: 63 -----LDDLGLAFQEMGIS-----------VPELKDYLKHVDPLPFACEVPQFPV----- 101
Query: 146 PKSSFLQI 153
P+ + LQ
Sbjct: 102 PRENLLQF 109
>gi|112363124|ref|NP_001036209.1| transcription initiation factor TFIID subunit 3 [Danio rerio]
Length = 898
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ F++++ +V+VAQ+C+ VG+ Q SA L+D+ RY+ + K+ + Y+ L GR +
Sbjct: 3 ESFARSLLRVSVAQMCQAVGWDAVQLSACDLLSDVLERYVQQLAKSCHRYSELYGRTDPG 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q GF G S + EL Y N + + IP FP+
Sbjct: 63 LSDVDQAF-------GFLGVS-----------IAELEDYVNNVEPIGYPQTIPQFPIS-- 102
Query: 144 RKPKSSFLQ 152
KSS LQ
Sbjct: 103 ---KSSVLQ 108
>gi|281205052|gb|EFA79245.1| hypothetical protein PPL_07663 [Polysphondylium pallidum PN500]
Length = 439
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D +++A+ +V VAQI F QSA L DI Y+ +G A+ Y L+ R E
Sbjct: 2 SDAYARALCRVVVAQITRGYRFSAISQSACEALTDIIGLYVEEIGSRAHQYCELASRTEC 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPV 140
N D+ + D+ +D + EL ++ +A ++PFA IP FP+
Sbjct: 62 NFHDVHEAFLDMSID------------------MNELHKFLIQAEEIPFARTIPPFPL 101
>gi|354465004|ref|XP_003494970.1| PREDICTED: transcription initiation factor TFIID subunit 3
[Cricetulus griseus]
gi|344238969|gb|EGV95072.1| Transcription initiation factor TFIID subunit 3 [Cricetulus
griseus]
Length = 930
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVSEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|350410088|ref|XP_003488940.1| PREDICTED: hypothetical protein LOC100743667 [Bombus impatiens]
Length = 1002
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 20/130 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++S+++ K+ VAQIC+ +G+ + + L + D+ YI + + A+ YA + GR E N+
Sbjct: 4 EYSRSVLKMVVAQICQTIGWHSINSTPLEFMVDLMQEYILQISRLAHQYAEILGRTEANL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ + +D ++EL +Y VP +P FPV R
Sbjct: 64 DDLGLAFRHMNID------------------IQELTEYIKNVDSVPCPVTVPKFPV--QR 103
Query: 145 KPKSSFLQIG 154
+ +FL+ G
Sbjct: 104 ENHLNFLKPG 113
>gi|57242908|gb|AAH89030.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
Length = 948
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 19 RKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANL 76
R SG + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L
Sbjct: 12 RPRSGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSEL 71
Query: 77 SGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIP 136
GR + + D+ + + +G++ + EL Y + V F + IP
Sbjct: 72 YGRTDPILDDVGEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIP 113
Query: 137 HFPVVKD 143
FPV K+
Sbjct: 114 SFPVSKN 120
>gi|74181644|dbj|BAE32543.1| unnamed protein product [Mus musculus]
Length = 932
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|116283896|gb|AAH39989.1| Taf3 protein [Mus musculus]
Length = 646
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|126340354|ref|XP_001363162.1| PREDICTED: transcription initiation factor TFIID subunit 3
[Monodelphis domestica]
Length = 932
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVSEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|405113028|ref|NP_001258271.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Rattus norvegicus]
gi|149021019|gb|EDL78626.1| rCG55816 [Rattus norvegicus]
Length = 930
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|326933891|ref|XP_003213031.1| PREDICTED: transcription initiation factor TFIID subunit 8-like,
partial [Meleagris gallopavo]
Length = 256
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 4 GGGESGSKHQQPHTKRKFSGDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLADIAV 60
G SGSKH D++ A +V V+ + GF++ +++A+ L ++
Sbjct: 9 SGTRSGSKHT------TTPADNYYLARRRTLQVVVSSLLTEAGFESAEKAAVETLTEMLQ 62
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
YI+ +G++A Y + R + + DI L ++G + V L
Sbjct: 63 SYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN------------------VETLP 104
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESP 179
YA + + + P V ++ L G+ +P IP + P FPDP TY ++P
Sbjct: 105 AYAKRSQRM-----VITAPPVTNQPVTPKALTAGQNKPHPSHIPGYFPEFPDPHTYIKTP 159
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
+ E SD + + Q+R +E + L R +++G + + D + + PF
Sbjct: 160 TYREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAARPF 215
>gi|262231748|ref|NP_082024.2| transcription initiation factor TFIID subunit 3 [Mus musculus]
gi|110287981|sp|Q5HZG4.2|TAF3_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 3;
AltName: Full=140 kDa TATA box-binding
protein-associated factor; AltName: Full=TBP-associated
factor 3; AltName: Full=Transcription initiation factor
TFIID 140 kDa subunit; Short=TAF(II)140; Short=TAF140;
Short=TAFII-140; Short=TAFII140
gi|13374178|emb|CAC34476.1| TAFII140 protein [Mus musculus]
gi|148676053|gb|EDL08000.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|187951735|gb|AAI37618.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
gi|187957546|gb|AAI37619.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Mus musculus]
Length = 932
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|344277699|ref|XP_003410637.1| PREDICTED: transcription initiation factor TFIID subunit 3
[Loxodonta africana]
Length = 930
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|380805073|gb|AFE74412.1| transcription initiation factor TFIID subunit 3, partial [Macaca
mulatta]
Length = 523
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 1 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPV 60
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 61 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 102
>gi|45478238|gb|AAS66290.1| LRRGT00199 [Rattus norvegicus]
Length = 607
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 10 SKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKA 69
SK + +R+ + +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+
Sbjct: 322 SKMDGFYQQRRGMCESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRG 381
Query: 70 ANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDV 129
+ Y+ L GR + + D+ + + +G++ + EL Y + V
Sbjct: 382 CHRYSELYGRTDPILDDVGEAFQLMGVN------------------LHELEDYIHNIEPV 423
Query: 130 PFAYAIPHFPVVKDRKPKSSFLQIGE------EPPIEDIPAWLPAFPDPQTYFESPSQNE 183
F + IP FPV K+S LQ + E + IP +LP Q P Q
Sbjct: 424 TFPHQIPSFPV-----SKNSVLQFPQPGSKDAEERKDYIPDYLPPIVSSQEGMPGPLQRP 478
Query: 184 RASDSYTEKIELG 196
SY +E+G
Sbjct: 479 ----SYFLGLEIG 487
>gi|338721492|ref|XP_003364381.1| PREDICTED: transcription initiation factor TFIID subunit 3, partial
[Equus caballus]
Length = 895
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVSEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|417413279|gb|JAA52976.1| Putative transcription initiation factor tfiid subunit 3, partial
[Desmodus rotundus]
Length = 972
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 43 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 102
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 103 LDDVSEAFQLMGVS------------------LNELEDYIHNIEPVTFPHQIPSFPVSKN 144
>gi|28175603|gb|AAH45106.1| TAF3 protein, partial [Homo sapiens]
gi|116283539|gb|AAH17320.1| TAF3 protein [Homo sapiens]
Length = 539
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|13374079|emb|CAC34475.1| TAFII140 protein [Homo sapiens]
Length = 727
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|90079789|dbj|BAE89574.1| unnamed protein product [Macaca fascicularis]
Length = 705
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|242247089|ref|NP_001156050.1| transcription initiation factor TFIID subunit 8-like [Acyrthosiphon
pisum]
gi|239790250|dbj|BAH71698.1| ACYPI000342 [Acyrthosiphon pisum]
Length = 282
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 25/189 (13%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
K VA I GFQ + SA+ L ++ ++ +G ++ YA ++GR E D+ GL
Sbjct: 11 KTTVAGILMENGFQAAEPSAMETLVEMLFSVLSQMGNSSRRYAEVAGRLEPLGADVMMGL 70
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
D+G+ F AS L+ YA + +P V+ R ++S L
Sbjct: 71 IDMGM---FKNASS-------------LLAYAKRSNRAVLPSPVPS---VQPR--QTSNL 109
Query: 152 QIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
Q G P +P+++PAFPDP Y +P+ + ++ + + Q+ ++E S++
Sbjct: 110 QAGTRLPHPSYMPSYMPAFPDPHAYIRTPTHKQPVTEYEAIREKSAIQKHELEKSLIKF- 168
Query: 211 RQFSESGPS 219
++GP+
Sbjct: 169 --LLKTGPT 175
>gi|47224439|emb|CAG08689.1| unnamed protein product [Tetraodon nigroviridis]
Length = 774
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +++++ +V+VAQIC+ +G+ Q +A L+D+ RYI + ++ + Y+ L GR +
Sbjct: 3 ESYARSLLRVSVAQICQALGWDAVQVTACNLLSDVLHRYIQQLARSCHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q LG++ G EL Y + V FA+ P FPV K+
Sbjct: 63 LDDVSQAFRLLGVNLG------------------ELEDYVHNLEPVAFAHQTPLFPVSKN 104
>gi|63100426|gb|AAH94546.1| Taf3 protein, partial [Mus musculus]
Length = 567
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVN------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|301604546|ref|XP_002931902.1| PREDICTED: transcription initiation factor TFIID subunit 3 isoform
2 [Xenopus (Silurana) tropicalis]
Length = 930
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q +A L D+ RY+ + + A+ Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGQAFKLMGVN------------------IHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|355782625|gb|EHH64546.1| TBP-associated factor 3 [Macaca fascicularis]
Length = 774
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|307171664|gb|EFN63416.1| Transcription initiation factor TFIID subunit 3 [Camponotus
floridanus]
Length = 187
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++S+ I K+ VAQIC+ +G+ + + L + D+ Y+ V + + YA + GR E N+
Sbjct: 4 EYSRNILKIVVAQICQMIGWHSINSTPLEFMVDLMQEYLLRVSRLTHQYAEVLGRTEPNL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ + + +D ++ELI+Y +P+ IP +PV R
Sbjct: 64 DDLGLTFQHMNID------------------IQELIEYVKNVDSIPYPIQIPQYPV--RR 103
Query: 145 KPKSSFLQIGEEPPIE---DIPAWLPA-FPDPQTYF 176
+ +FL+ G + I LPA +PD + +
Sbjct: 104 ENHLNFLKPGSREVVTRSVHIHEHLPAMYPDTEAHM 139
>gi|301604544|ref|XP_002931901.1| PREDICTED: transcription initiation factor TFIID subunit 3 isoform
1 [Xenopus (Silurana) tropicalis]
Length = 928
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q +A L D+ RY+ + + A+ Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGQAFKLMGVN------------------IHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|426240699|ref|XP_004014231.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Ovis
aries]
Length = 930
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVSEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|291401982|ref|XP_002717391.1| PREDICTED: RNA polymerase II transcription factor TAFII140
[Oryctolagus cuniculus]
Length = 930
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|71895059|ref|NP_001026012.1| transcription initiation factor TFIID subunit 3 [Gallus gallus]
gi|82075449|sp|Q5F489.1|TAF3_CHICK RecName: Full=Transcription initiation factor TFIID subunit 3;
AltName: Full=TBP-associated factor 3
gi|60098429|emb|CAH65045.1| hypothetical protein RCJMB04_2c9 [Gallus gallus]
Length = 930
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+ + +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y L GR +
Sbjct: 3 ETYSRWLLRVSVAQICQALGWDSVQVSACDLLTDVLQRYLQGLGRGCHRYCELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + +G++ + EL Y + V FA+ IP FPV K+
Sbjct: 63 LDDVGDAFKLMGVN------------------LHELEDYIHNIEPVTFAHQIPSFPVSKN 104
>gi|355723106|gb|AES07785.1| TAF3 RNA polymerase II, TATA box binding protein -associated
factor, 140kDa [Mustela putorius furo]
Length = 933
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|157423447|gb|AAI53704.1| taf3 protein [Xenopus (Silurana) tropicalis]
Length = 530
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q +A L D+ RY+ + + A+ Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGQAFKLMGVN------------------IHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|49250489|gb|AAH74544.1| taf3 protein [Xenopus (Silurana) tropicalis]
Length = 540
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q +A L D+ RY+ + + A+ Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGQAFKLMGVN------------------IHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|73949156|ref|XP_544263.2| PREDICTED: transcription initiation factor TFIID subunit 3 [Canis
lupus familiaris]
Length = 932
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|402879598|ref|XP_003903421.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Papio
anubis]
Length = 931
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|151301171|ref|NP_114129.1| transcription initiation factor TFIID subunit 3 [Homo sapiens]
gi|74747393|sp|Q5VWG9.1|TAF3_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 3;
AltName: Full=140 kDa TATA box-binding
protein-associated factor; AltName: Full=TBP-associated
factor 3; AltName: Full=Transcription initiation factor
TFIID 140 kDa subunit; Short=TAF(II)140; Short=TAF140;
Short=TAFII-140; Short=TAFII140
gi|225000128|gb|AAI72366.1| TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 140kDa [synthetic construct]
Length = 929
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|332833584|ref|XP_001157768.2| PREDICTED: transcription initiation factor TFIID subunit 3 [Pan
troglodytes]
Length = 931
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|62739363|gb|AAH94183.1| LOC446224 protein, partial [Xenopus laevis]
Length = 529
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q +A L D+ RY+ + + A+ Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGQAFKLMGVN------------------INELEDYIHNIEPVTFPHPIPSFPVSKN 104
>gi|410963187|ref|XP_003988147.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Felis
catus]
Length = 1017
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVSEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|50417993|gb|AAH77807.1| LOC446224 protein, partial [Xenopus laevis]
Length = 540
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q +A L D+ RY+ + + A+ Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGQAFKLMGVN------------------INELEDYIHNIEPVTFPHPIPSFPVSKN 104
>gi|326911084|ref|XP_003201892.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Meleagris gallopavo]
Length = 911
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
+S+ + +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y L GR + +
Sbjct: 23 YSRWLLRVSVAQICQALGWDSVQVSACDLLTDVLQRYLQGLGRGCHRYCELYGRTDPILD 82
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
D+ + +G++ + EL Y + V FA+ IP FPV K+
Sbjct: 83 DVGDAFKLMGVN------------------LHELEDYIHNIEPVTFAHQIPSFPVSKN 122
>gi|359071307|ref|XP_003586802.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Bos
taurus]
gi|440906269|gb|ELR56551.1| Transcription initiation factor TFIID subunit 3 [Bos grunniens
mutus]
Length = 932
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|348575371|ref|XP_003473463.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Cavia
porcellus]
Length = 928
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|383852633|ref|XP_003701831.1| PREDICTED: uncharacterized protein LOC100876502 [Megachile
rotundata]
Length = 1001
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 20/130 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++S+++ ++ VAQIC+ +G+ + + L + D+ Y+ + K + YA + GR E N+
Sbjct: 4 EYSRSVLRMVVAQICQTIGWHSINSTPLEFMVDLMQEYLLRISKLTHQYAEILGRTEANI 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ + +D V+EL +Y VP + +P FP+ ++
Sbjct: 64 NDLGLAFRHMNID------------------VQELAEYIKNVDSVPCSIMVPKFPIRREN 105
Query: 145 KPKSSFLQIG 154
+FL+ G
Sbjct: 106 --HLNFLKPG 113
>gi|111494036|gb|AAI05594.1| TAF3 protein [Homo sapiens]
Length = 283
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|328873043|gb|EGG21410.1| hypothetical protein DFA_01294 [Dictyostelium fasciculatum]
Length = 368
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 18/115 (15%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
+++++ KV VAQ+ + +GF + +A L DI YI +G A+ Y+ L+ R + N
Sbjct: 5 YARSLCKVVVAQLVKALGFTSISHAACEALTDIIKLYIEEIGTRAHSYSELACRTDSNFH 64
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPV 140
D+ Q D+ +D + +L QY +A ++PFA FP+
Sbjct: 65 DVRQAFTDMSVD------------------MNDLSQYLLQADEIPFAKTFTPFPI 101
>gi|327271989|ref|XP_003220769.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 2 [Anolis carolinensis]
Length = 924
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+ + +V+VAQ+C+ +G+ + Q SA L D+ RY++++G+ Y L GR +
Sbjct: 3 ESYSRWLLRVSVAQVCQALGWDSVQLSACDLLTDVLQRYLHALGRGCRRYCELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y V FA+ IP FPV K+
Sbjct: 63 LEDVGEAFKLMGVN------------------LHELEDYILNIEPVTFAHQIPSFPVSKN 104
>gi|119606777|gb|EAW86371.1| hCG2017949 [Homo sapiens]
Length = 174
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
Query: 144 RKPKSSFLQIGE---EPPIEDIPAWLPAFPDPQTYF 176
+ F Q G E E IP +LP Q F
Sbjct: 105 NVLQ--FPQPGSKDAEERKEYIPDYLPPIVSSQEGF 138
>gi|327271987|ref|XP_003220768.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 1 [Anolis carolinensis]
Length = 937
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+ + +V+VAQ+C+ +G+ + Q SA L D+ RY++++G+ Y L GR +
Sbjct: 3 ESYSRWLLRVSVAQVCQALGWDSVQLSACDLLTDVLQRYLHALGRGCRRYCELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y V FA+ IP FPV K+
Sbjct: 63 LEDVGEAFKLMGVN------------------LHELEDYILNIEPVTFAHQIPSFPVSKN 104
>gi|432861265|ref|XP_004069582.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 2 [Oryzias latipes]
Length = 930
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +++++ +V+VAQIC+ +G+ Q +A L+D+ RYI + + + Y+ L GR +
Sbjct: 3 ESYARSLLRVSVAQICQALGWDAVQLTACDLLSDVLQRYIQQLARVCHRYSELYGRTDPM 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q +G++ + EL Y + V FA+ P FPV K+
Sbjct: 63 LDDLSQAFRLMGVN------------------LSELEDYVHNLEPVAFAHQTPLFPVCKN 104
>gi|432861263|ref|XP_004069581.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
isoform 1 [Oryzias latipes]
Length = 933
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +++++ +V+VAQIC+ +G+ Q +A L+D+ RYI + + + Y+ L GR +
Sbjct: 3 ESYARSLLRVSVAQICQALGWDAVQLTACDLLSDVLQRYIQQLARVCHRYSELYGRTDPM 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q +G++ + EL Y + V FA+ P FPV K+
Sbjct: 63 LDDLSQAFRLMGVN------------------LSELEDYVHNLEPVAFAHQTPLFPVCKN 104
>gi|242016826|ref|XP_002428910.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212513701|gb|EEB16172.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 969
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 21/119 (17%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
F +A+ K+ V+Q+C+ +G+ Q S+L L D+ RY+ + + ++ YA+ GR N
Sbjct: 154 FIKAL-KMVVSQVCQTIGWHAIQTSSLEVLIDVLHRYLEEIARTSHLYADQFGRTRPN-- 210
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGI-VRELIQYANEATDVPFAYAIPHFPVVKD 143
L+DLGL FS G+ +++L +Y VP Y +P +PV K+
Sbjct: 211 -----LDDLGL--AFSAM----------GVEIKQLEEYIEYVESVPCNYQVPKYPVAKE 252
>gi|405964001|gb|EKC29529.1| Transcription initiation factor TFIID subunit 8 [Crassostrea gigas]
Length = 275
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
KVAV+ + GF+ +++A+ L ++ ++ +G+++ +A L+GR EG + D+ L
Sbjct: 17 KVAVSALASEAGFERAEEAAVETLTEMLQSFLTELGRSSQAFAELAGRTEGMMTDVVMAL 76
Query: 92 EDLGLD-QGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSF 150
++G + QG + + N++ +P +++ P P
Sbjct: 77 IEMGQNLQGLPAHA----------------KRPNKSVFLPPSHSTP--------TPNPRT 112
Query: 151 LQIGEE-PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNL 209
LQ G++ P IP +PAFPDP TY + +Q ++ + + Q+R +E ++
Sbjct: 113 LQAGDKMPHPSHIPDHMPAFPDPHTYIRTLTQKAPINEYQIIREKAASQKRDVERALTRF 172
Query: 210 QRQFSES 216
+ E+
Sbjct: 173 IAKTGET 179
>gi|432089719|gb|ELK23536.1| Transcription initiation factor TFIID subunit 3 [Myotis davidii]
Length = 175
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVN------------------LNELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|405961204|gb|EKC27040.1| Transcription initiation factor TFIID subunit 3 [Crassostrea gigas]
Length = 334
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 34/164 (20%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+++ Q I ++A+AQ+C+ VG+ Q + L L D+ RY+ + K + YA GR
Sbjct: 3 EEYCQGILRIALAQLCQSVGWNAAQSTPLELLTDVMGRYMLQLAKVTHRYAEQFGRTTPT 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ ++G+ + EL +Y +PFA+ I FP
Sbjct: 63 LDDVGLAFRNMGIS------------------LSELEEYVRHVEPLPFAHEIVQFPA--- 101
Query: 144 RKPKSSFLQI---------GEEPPIEDIPAWLPAFPDPQTYFES 178
PK S LQI E IED L FP P+ E+
Sbjct: 102 --PKKSNLQIPKPGHKELLSREEHIEDYMPLL--FPTPEDEVEN 141
>gi|405953382|gb|EKC21056.1| Serine/threonine-protein kinase TBK1 [Crassostrea gigas]
Length = 1721
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 34/164 (20%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+++ Q I ++A+AQ+C+ VG+ Q + L L D+ RY+ + K + YA GR
Sbjct: 52 EEYCQGILRIALAQLCQSVGWNAAQSTPLELLTDVMGRYMLQLAKVTHRYAEQFGRTTPT 111
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ ++G+ + EL +Y +PFA+ I FP
Sbjct: 112 LDDVGLAFRNMGIS------------------LSELEEYVRHVEPLPFAHEIVQFPA--- 150
Query: 144 RKPKSSFLQI---------GEEPPIEDIPAWLPAFPDPQTYFES 178
PK S LQI E IED L FP P+ E+
Sbjct: 151 --PKKSNLQIPKPGHKELLSREEHIEDYMPLL--FPTPEDEVEN 190
>gi|410908439|ref|XP_003967698.1| PREDICTED: transcription initiation factor TFIID subunit 3-like
[Takifugu rubripes]
Length = 930
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +++++ +V+VAQIC+ +G+ Q +A L+D+ RYI + + + Y+ L GR +
Sbjct: 3 ESYARSLLRVSVAQICQALGWDAVQVTACDLLSDVLHRYIQQLARTCHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q LG++ + EL Y + V FA+ P FPV K+
Sbjct: 63 LDDVSQAFRLLGVN------------------LSELEDYVHNLEPVAFAHQTPLFPVGKN 104
>gi|395741319|ref|XP_003777562.1| PREDICTED: transcription initiation factor TFIID subunit 3 [Pongo
abelii]
Length = 138
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 23/147 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
Query: 144 RKPKSSFLQIGE---EPPIEDIPAWLP 167
+ F Q G E E IP +LP
Sbjct: 105 NVLQ--FPQPGSKDAEERKEYIPDYLP 129
>gi|431917646|gb|ELK16911.1| Transcription initiation factor TFIID subunit 3 [Pteropus alecto]
Length = 156
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ + + +G+ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGEAFQLMGVS------------------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104
>gi|412990254|emb|CCO19572.1| unknown protein [Bathycoccus prasinos]
Length = 215
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 30/154 (19%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANL--SGRAEG 82
D ++ + ++A Q C + +GKLA Y S+ F ++ GR++
Sbjct: 17 DLNEKVKRIAFVQ-CSYI-------EEVGKLAIGNAEYGVSIFIETEFVSHKVEQGRSQI 68
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D+ QGL+ LG D ++ +I YA+ PFA +P V++
Sbjct: 69 NILDVLQGLQALGDD------------------LKSIILYADTLDSKPFAIPLPKKFVIR 110
Query: 143 DR-KPKSSFLQIGEEPPIEDIPAWLPAFPDPQTY 175
R K ++SFL++ E P +IP + PAFPD TY
Sbjct: 111 RRPKVQTSFLKVAEPQPT-NIPHYFPAFPDKHTY 143
>gi|26345424|dbj|BAC36363.1| unnamed protein product [Mus musculus]
Length = 308
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
+ ++ A T+ P PK+ L G+ P IP+ P FPDP TY
Sbjct: 113 QRMVITAPPVTNQPLT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTY 157
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVES 235
++P+ E SD + + Q+R +E + L R +++G + + D + +
Sbjct: 158 IKTPTYREPVSDYQILREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAA 214
Query: 236 NPF 238
PF
Sbjct: 215 RPF 217
>gi|84105476|gb|AAI11511.1| Ccna1 protein [Xenopus laevis]
Length = 171
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q +A L D+ RY+ + + A+ Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQVTACDLLTDVLQRYLQQLCRGAHRYSELYGRTDPV 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ Q + +G++ + EL Y + V F + IP FPV K+
Sbjct: 63 LDDVGQAFKLMGVN------------------INELEDYIHNIEPVTFPHPIPSFPVSKN 104
>gi|198415671|ref|XP_002126955.1| PREDICTED: similar to TAF3 RNA polymerase II, TATA box binding
protein (TBP)-associated factor [Ciona intestinalis]
Length = 850
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 27/150 (18%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D FS+ + K+ VAQ+ + VGF + Q L L D+ R++ + G+ A+ + GR
Sbjct: 2 ADVFSKGVLKIVVAQLTQAVGFDSLQLGTLEVLTDLLERFLLTTGRTAHDLSEKCGRT-- 59
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV-RELIQYANEATDVPFAYAIPHFPVV 141
++ G DI HC I RE+I Y + V F + FP+
Sbjct: 60 ---NVMTG--------------DIEHCFNLLHISPREIIDYVQQMDQVQFPSKVAKFPI- 101
Query: 142 KDRKPKSSFLQIG--EEPPIEDIPAWLPAF 169
PKSS Q E DIP++ P+
Sbjct: 102 ----PKSSNFQFQSIHESSDSDIPSYFPSL 127
>gi|72039431|ref|XP_797171.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Strongylocentrotus purpuratus]
Length = 285
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 81/184 (44%), Gaps = 36/184 (19%)
Query: 33 VAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLE 92
VAVA C GF T + L LA+I YI +G+++ Y L+ R+ V DI +
Sbjct: 19 VAVAATCSEAGFTTGDEDCLETLAEIMQSYITELGQSSRAYCELACRSLPMVTDIGMAMS 78
Query: 93 DLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR-KPKS--S 149
G+D EL Q+A + IP +DR +P S S
Sbjct: 79 QSGVD------------------ASELKQFARRKNKI----IIPK----QDRLRPTSDPS 112
Query: 150 FLQIGEEPPIEDIPAW----LPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMS 205
LQ+G+ P++ LPAFPD TY ++P+ + +D T + + Q+R +E +
Sbjct: 113 GLQVGQR---NKHPSYIYDHLPAFPDSHTYIQTPTFKPQDNDYKTVREKAASQRRDVERA 169
Query: 206 MVNL 209
+
Sbjct: 170 LTRF 173
>gi|156395386|ref|XP_001637092.1| predicted protein [Nematostella vectensis]
gi|156224201|gb|EDO45029.1| predicted protein [Nematostella vectensis]
Length = 255
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 31/176 (17%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
I ++AV +C GF + + A+ + ++ Y++ + ++A Y LS R + D+
Sbjct: 11 ILQIAVCALCREQGFASTSRMAMETMTEMLQSYLSELARSAKTYCELSSRVRPTLGDVRM 70
Query: 90 GLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDV----PFAYAIPHFPVVKDRK 145
L D+G D + + YA + P +P P +
Sbjct: 71 ALIDMGAD------------------LDSIPVYAKRTHRLHVNNPLKSRVPPAPKALETG 112
Query: 146 PKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRK 201
PK EP IP LP+FPDP +Y ++P+ + AS+ Y E QRK
Sbjct: 113 PK--------EPCPPYIPPHLPSFPDPHSYVKTPTTRQ-ASEEYKAVRERYASQRK 159
>gi|37046785|gb|AAH57895.1| Taf8 protein [Mus musculus]
Length = 221
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
+ ++ A T+ P PK+ L G+ P IP+ P FPDP TY
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTY 157
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
++P+ E SD + + Q+R +E ++ + E+
Sbjct: 158 IKTPTYREPVSDYQILREKAASQRRDVERALTRFMAKTGET 198
>gi|148691618|gb|EDL23565.1| taube nuss, isoform CRA_a [Mus musculus]
Length = 222
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 98/221 (44%), Gaps = 28/221 (12%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
+ ++ A T+ P PK+ L G+ P IP+ P FPDP TY
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTY 157
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
++P+ E SD + + Q+R +E ++ + E+
Sbjct: 158 IKTPTYREPVSDYQILREKAASQRRDVERALTRFMAKTGET 198
>gi|26352151|dbj|BAC39712.1| unnamed protein product [Mus musculus]
Length = 305
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
+ ++ A T+ P PK+ L G+ P IP+ P FPDP TY
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTY 157
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVES 235
++P+ E SD + + Q+R +E + L R +++G + + D + +
Sbjct: 158 IKTPTYREPVSDYQILREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAA 214
Query: 236 NPF 238
PF
Sbjct: 215 RPF 217
>gi|148691620|gb|EDL23567.1| taube nuss, isoform CRA_c [Mus musculus]
Length = 259
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 35/245 (14%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE---EPPIEDIPAWLPAFPDPQ 173
+ ++ A T+ P PK+ L G+ PP IP+ P FPDP
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPP--HIPSHFPEFPDPH 155
Query: 174 TYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTV 233
TY ++P+ E SD + + Q+R +E + L R +++G + + D +
Sbjct: 156 TYIKTPTYREPVSDYQILREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLI 212
Query: 234 ESNPF 238
+ PF
Sbjct: 213 AARPF 217
>gi|11528498|ref|NP_071298.1| transcription initiation factor TFIID subunit 8 [Mus musculus]
gi|81881848|sp|Q9EQH4.1|TAF8_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=Protein taube nuss; AltName:
Full=TBP-associated factor 8
gi|9886977|gb|AAG01682.1|AF222802_1 taube nuss [Mus musculus]
gi|26337083|dbj|BAC32225.1| unnamed protein product [Mus musculus]
gi|148691619|gb|EDL23566.1| taube nuss, isoform CRA_b [Mus musculus]
Length = 308
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
+ ++ A T+ P PK+ L G+ P IP+ P FPDP TY
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTY 157
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVES 235
++P+ E SD + + Q+R +E + L R +++G + + D + +
Sbjct: 158 IKTPTYREPVSDYQILREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAA 214
Query: 236 NPF 238
PF
Sbjct: 215 RPF 217
>gi|74187570|dbj|BAE36731.1| unnamed protein product [Mus musculus]
Length = 265
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 35/245 (14%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE---EPPIEDIPAWLPAFPDPQ 173
+ ++ A T+ P PK+ L G+ PP IP+ P FPDP
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPP--HIPSHFPEFPDPH 155
Query: 174 TYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTV 233
TY ++P+ E SD + + Q+R +E + L R +++G + + D +
Sbjct: 156 TYIKTPTYREPVSDYQILREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLI 212
Query: 234 ESNPF 238
+ PF
Sbjct: 213 AARPF 217
>gi|312379723|gb|EFR25910.1| hypothetical protein AND_08344 [Anopheles darlingi]
Length = 1634
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 23/147 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D ++ + K+AVAQIC+ +G+ + + + L D+ ++ + + + Y+ L R E N
Sbjct: 250 DAYAMHVLKIAVAQICQTIGWHSTHTTTMELLVDVTQHFLREISRIMHRYSELYNRTEPN 309
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ D+G++ + E+++Y +P + +P FPV K+
Sbjct: 310 LDDLALAYRDIGIN------------------LPEMLEYIEFVDPIPLSLDVPRFPVPKE 351
Query: 144 RKPKSSFLQIGEEPPIE---DIPAWLP 167
FL+ G + + IP +LP
Sbjct: 352 T--NLCFLKPGSKEVLTRPMHIPEYLP 376
>gi|443730194|gb|ELU15820.1| hypothetical protein CAPTEDRAFT_183324 [Capitella teleta]
Length = 292
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 30/189 (15%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
KVAV+ +C GF + +AL L ++ + ++ +G+++ + LS R E D+ L
Sbjct: 19 KVAVSLMCTEAGFALAEDAALETLIEMVISFLTELGRSSRALSELSCRTEVMPGDVALAL 78
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIP--HFPVVKDRKPKSS 149
++G + EL+ YA F IP H P ++P
Sbjct: 79 IEMGQR------------------IDELVSYAKSTKHNVF---IPPGHAP----QQPPPR 113
Query: 150 FLQIGEEP--PIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
LQ+GE+ P IP +LP+FPDP TY + + ++ + + Q+R +E ++
Sbjct: 114 ILQVGEKKGHPTH-IPDYLPSFPDPHTYITTSTHKAPMTEYKLVREKAASQKRDVERALT 172
Query: 208 NLQRQFSES 216
+ E+
Sbjct: 173 RFIAKTGET 181
>gi|347963346|ref|XP_001687763.2| AGAP000189-PA [Anopheles gambiae str. PEST]
gi|333467243|gb|EDO64354.2| AGAP000189-PA [Anopheles gambiae str. PEST]
Length = 1684
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++SQ + KVAVAQIC+ +G+ + S + L D+ ++ + + + Y L R E N+
Sbjct: 4 EYSQHVLKVAVAQICQTIGWHSTHTSTMDLLVDVTQHFLREISRIMHRYCELYNRTEANL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
D+ +++G++ + EL++Y +P +P FP+ K+
Sbjct: 64 DDLALAYKEIGIN------------------LDELMEYIQFVDPIPLPLEVPRFPLPKE 104
>gi|149069445|gb|EDM18886.1| rCG43696, isoform CRA_c [Rattus norvegicus]
Length = 213
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 97/221 (43%), Gaps = 28/221 (12%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTATGPGGSGTRPGNKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
+ ++ A T+ P PK+ L G+ P IP+ P FPDP TY
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTY 157
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
++P+ E SD + + Q+R +E ++ + E+
Sbjct: 158 IKTPTYREPVSDYQVLREKAASQRRDVERALTRFMAKTGET 198
>gi|149069443|gb|EDM18884.1| rCG43696, isoform CRA_a [Rattus norvegicus]
Length = 269
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 35/245 (14%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTATGPGGSGTRPGNKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE---EPPIEDIPAWLPAFPDPQ 173
+ ++ A T+ P PK+ L G+ PP IP+ P FPDP
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPP--HIPSHFPEFPDPH 155
Query: 174 TYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTV 233
TY ++P+ E SD + + Q+R +E + L R +++G + + D +
Sbjct: 156 TYIKTPTYREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLI 212
Query: 234 ESNPF 238
+ PF
Sbjct: 213 AARPF 217
>gi|16553063|dbj|BAB71460.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 95/210 (45%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGEE---PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G++ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQDRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|156358306|ref|XP_001624462.1| predicted protein [Nematostella vectensis]
gi|156211244|gb|EDO32362.1| predicted protein [Nematostella vectensis]
Length = 130
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 23/127 (18%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
F+ +VAVAQIC+ +G+ + +S L D+ +Y+ + K+A+ Y L E N
Sbjct: 5 FNHFALRVAVAQICQSMGWDSLHKSTHDLLTDVMQKYMEEIAKSAHAYCQLYCHTEPN-- 62
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
L+DLGL FS + ++ EL Y + V F + +P FP K
Sbjct: 63 -----LDDLGL--AFSD---------TGVLLNELEDYVTQVDQVHFFHQLPRFP-----K 101
Query: 146 PKSSFLQ 152
PK+ L
Sbjct: 102 PKACLLH 108
>gi|449271601|gb|EMC81885.1| Transcription initiation factor TFIID subunit 8, partial [Columba
livia]
Length = 290
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 25/207 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++A+ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 21 QVVVSSLLTEAGFESAEKAAVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 80
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + + A + + ++ A T+ P P KP
Sbjct: 81 VEMGFN--------VETLPAYAKRSQRMVITAPPVTNQPVT---PKALTAGQNKP----- 124
Query: 152 QIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
PP IP P FPDP TY ++P+ E SD + + Q+R +E + L R
Sbjct: 125 ----HPP--HIPGHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LTR 175
Query: 212 QFSESGPSSFVHGDSSKEKKTVESNPF 238
+++G + + D + + PF
Sbjct: 176 FMAKTGETQSLFKDDVSTFPLIAARPF 202
>gi|157816919|ref|NP_001101667.1| transcription initiation factor TFIID subunit 8 [Rattus norvegicus]
gi|149069444|gb|EDM18885.1| rCG43696, isoform CRA_b [Rattus norvegicus]
Length = 308
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 35/245 (14%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTATGPGGSGTRPGNKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + ++ A +
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRS 112
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE---EPPIEDIPAWLPAFPDPQ 173
+ ++ A T+ P PK+ L G+ PP IP+ P FPDP
Sbjct: 113 QRMVITAPPVTNQPVT-------------PKA--LTAGQNRPHPP--HIPSHFPEFPDPH 155
Query: 174 TYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTV 233
TY ++P+ E SD + + Q+R +E + L R +++G + + D +
Sbjct: 156 TYIKTPTYREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLI 212
Query: 234 ESNPF 238
+ PF
Sbjct: 213 AARPF 217
>gi|426251095|ref|XP_004019267.1| PREDICTED: transcription initiation factor TFIID subunit 8 [Ovis
aries]
Length = 328
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 56 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 115
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 116 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 152
Query: 152 QIGE-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
G+ P IP+ P FPDP TY ++P+ E SD + + Q+R +E + L
Sbjct: 153 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LT 209
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPF 238
R +++G + + D + + PF
Sbjct: 210 RFMAKTGETQSLFKDDVSTFPLIAARPF 237
>gi|194223502|ref|XP_001496879.2| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Equus caballus]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 4 GGGESGSKHQQPHTKRKFSGDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLADIAV 60
G SGSK + D++ A +V V+ + GF++ +++++ L ++
Sbjct: 13 SGTRSGSK------QSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLTEMLQ 66
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
YI+ +G++A Y + R + + DI L ++G + ++ A + + ++
Sbjct: 67 SYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRSQRMV 118
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESP 179
A T+ P PK+ L G+ P IP+ P FPDP TY ++P
Sbjct: 119 ITAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTYIKTP 163
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
+ E SD + + Q+R +E + L R +++G + + D + + PF
Sbjct: 164 TYREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|345778765|ref|XP_538919.3| PREDICTED: transcription initiation factor TFIID subunit 8 isoform
2 [Canis lupus familiaris]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|344263760|ref|XP_003403964.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Loxodonta africana]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|410959172|ref|XP_003986186.1| PREDICTED: transcription initiation factor TFIID subunit 8 [Felis
catus]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|301757406|ref|XP_002914532.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Ailuropoda melanoleuca]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|355723145|gb|AES07797.1| TAF8 RNA polymerase II, TATA box binding protein -associated
factor, 43kDa [Mustela putorius furo]
Length = 259
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 37 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 96
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 97 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 133
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 134 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 188
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 189 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 218
>gi|395832351|ref|XP_003789235.1| PREDICTED: transcription initiation factor TFIID subunit 8
[Otolemur garnettii]
Length = 310
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|119624483|gb|EAX04078.1| taube nuss homolog (mouse), isoform CRA_a [Homo sapiens]
gi|119624484|gb|EAX04079.1| taube nuss homolog (mouse), isoform CRA_a [Homo sapiens]
Length = 338
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
G+ P IP+ P FPDP TY ++P+ E SD + + Q+R +E + L
Sbjct: 135 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LT 191
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPF 238
R +++G + + D + + PF
Sbjct: 192 RFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|281345743|gb|EFB21327.1| hypothetical protein PANDA_002452 [Ailuropoda melanoleuca]
Length = 297
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 28 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 87
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 88 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 124
Query: 152 QIGE-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
G+ P IP+ P FPDP TY ++P+ E SD + + Q+R +E + L
Sbjct: 125 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LT 181
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPF 238
R +++G + + D + + PF
Sbjct: 182 RFMAKTGETQSLFKDDVSTFPLIAARPF 209
>gi|155372121|ref|NP_001094670.1| transcription initiation factor TFIID subunit 8 [Bos taurus]
gi|166225540|sp|A7MAZ4.1|TAF8_BOVIN RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=TBP-associated factor 8
gi|154425553|gb|AAI51256.1| TAF8 protein [Bos taurus]
gi|296474438|tpg|DAA16553.1| TPA: transcription initiation factor TFIID subunit 8 [Bos taurus]
Length = 310
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
G+ P IP+ P FPDP TY ++P+ E SD + + Q+R +E + L
Sbjct: 135 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LT 191
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPF 238
R +++G + + D + + PF
Sbjct: 192 RFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|291396196|ref|XP_002714721.1| PREDICTED: TBP-associated factor 8 [Oryctolagus cuniculus]
Length = 307
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
Query: 4 GGGESGSKHQQPHTKRKFSGDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLADIAV 60
G SGSK + D++ A +V V+ + GF++ +++++ L ++
Sbjct: 13 SGTRSGSK------QSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLTEMLQ 66
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
YI+ +G++A Y + R + + DI L ++G + ++ A + + ++
Sbjct: 67 SYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRSQRMV 118
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESP 179
A T+ P PK+ L G+ P IP+ P FPDP TY ++P
Sbjct: 119 ITAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTYIKTP 163
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
+ E SD + + Q+R +E + L R +++G + + D + + PF
Sbjct: 164 TYREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|119624485|gb|EAX04080.1| taube nuss homolog (mouse), isoform CRA_b [Homo sapiens]
Length = 338
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
G+ P IP+ P FPDP TY ++P+ E SD + + Q+R +E + L
Sbjct: 135 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LT 191
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPF 238
R +++G + + D + + PF
Sbjct: 192 RFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|332234239|ref|XP_003266318.1| PREDICTED: transcription initiation factor TFIID subunit 8 isoform
1 [Nomascus leucogenys]
gi|426353143|ref|XP_004044057.1| PREDICTED: transcription initiation factor TFIID subunit 8 isoform
1 [Gorilla gorilla gorilla]
Length = 307
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|104485446|ref|NP_612639.2| transcription initiation factor TFIID subunit 8 [Homo sapiens]
gi|114607434|ref|XP_518472.2| PREDICTED: transcription initiation factor TFIID subunit 8 isoform
2 [Pan troglodytes]
gi|296198153|ref|XP_002746583.1| PREDICTED: transcription initiation factor TFIID subunit 8
[Callithrix jacchus]
gi|297678123|ref|XP_002816932.1| PREDICTED: transcription initiation factor TFIID subunit 8 [Pongo
abelii]
gi|397526891|ref|XP_003833348.1| PREDICTED: transcription initiation factor TFIID subunit 8 [Pan
paniscus]
gi|402866965|ref|XP_003897639.1| PREDICTED: transcription initiation factor TFIID subunit 8 [Papio
anubis]
gi|74723384|sp|Q7Z7C8.1|TAF8_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=Protein taube nuss; AltName:
Full=TBP-associated factor 43 kDa; AltName:
Full=TBP-associated factor 8; AltName:
Full=Transcription initiation factor TFIID 43 kDa
subunit; Short=TAFII-43; Short=TAFII43; Short=hTAFII43
gi|31323620|gb|AAP47094.1|AF465841_1 TBP-associated factor TAFII43 [Homo sapiens]
gi|380809616|gb|AFE76683.1| transcription initiation factor TFIID subunit 8 [Macaca mulatta]
gi|410330619|gb|JAA34256.1| TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 43kDa [Pan troglodytes]
Length = 310
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|356499052|ref|XP_003518358.1| PREDICTED: probable polyamine oxidase 4-like [Glycine max]
Length = 721
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHC-LASSGIVRELIQ 121
+ ++ ++A +AN S R + N+FD+ G+ D+ QGF G S I+ L S ++E++
Sbjct: 1 MEAIVRSAATFANASNRTDSNLFDLTNGIHDVCSVQGFPGGSIIHKSNLLGSSALKEIMN 60
Query: 122 YANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFP 170
+ N + VPFA IP F V + S + IP WLP FP
Sbjct: 61 FVNLSNKVPFAKPIP-FRNVSEVTIDSGTSMCLSKQVKTHIPRWLPHFP 108
>gi|355561692|gb|EHH18324.1| hypothetical protein EGK_14898, partial [Macaca mulatta]
Length = 337
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
G+ P IP+ P FPDP TY ++P+ E SD + + Q+R +E + L
Sbjct: 135 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LT 191
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPF 238
R +++G + + D + + PF
Sbjct: 192 RFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|111601403|gb|AAI19679.1| TAF8 protein [Homo sapiens]
gi|111601406|gb|AAI19680.1| TAF8 protein [Homo sapiens]
Length = 311
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 189
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|156340262|ref|XP_001620400.1| hypothetical protein NEMVEDRAFT_v1g7672 [Nematostella vectensis]
gi|156205271|gb|EDO28300.1| predicted protein [Nematostella vectensis]
Length = 121
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 23/121 (19%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+VAVAQIC+ +G+ + +S L D+ +Y+ + K+A+ Y L E N L
Sbjct: 2 RVAVAQICQSMGWDSLHKSTHDLLTDVMQKYMEEIAKSAHAYCQLYCHTEPN-------L 54
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
+DLGL FS + ++ EL Y + V F + +P FP KPK+ L
Sbjct: 55 DDLGL--AFSD---------TGVLLNELEDYVTQVDQVHFFHQLPRFP-----KPKACLL 98
Query: 152 Q 152
Sbjct: 99 H 99
>gi|348576278|ref|XP_003473914.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Cavia porcellus]
Length = 307
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 36/243 (14%)
Query: 2 SDGGGESGSKHQQPHTKRKFSGDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLADI 58
+ G G SG++ + D++ A +V V+ + GF++ +++++ L ++
Sbjct: 7 TTGAGGSGTRSGSKQSTNP--ADNYYLARRRTLQVVVSSLLTEAGFESAEKASVETLTEM 64
Query: 59 AVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRE 118
YI+ +G++A Y + R + + DI L ++G + ++ A + +
Sbjct: 65 LQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRSQR 116
Query: 119 LIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE---EPPIEDIPAWLPAFPDPQTY 175
++ A T+ P PK+ L G+ PP IP+ P FPDP TY
Sbjct: 117 MVITAPPVTNQPVT-------------PKA--LTAGQNRPHPP--HIPSHFPEFPDPHTY 159
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVES 235
++P+ E SD + + Q+R +E + L R +++G + + D + +
Sbjct: 160 IKTPTYREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAA 216
Query: 236 NPF 238
PF
Sbjct: 217 RPF 219
>gi|354487862|ref|XP_003506090.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Cricetulus griseus]
gi|344250709|gb|EGW06813.1| Transcription initiation factor TFIID subunit 8 [Cricetulus
griseus]
Length = 308
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 31/210 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 36 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 95
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 96 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 132
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 133 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA--- 187
Query: 209 LQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 188 LTRFMAKTGETQSLFKDDVSTFPLIAARPF 217
>gi|355748559|gb|EHH53042.1| hypothetical protein EGM_13600, partial [Macaca fascicularis]
Length = 337
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 93/208 (44%), Gaps = 27/208 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
G+ P IP+ P FPDP TY ++P+ E SD + + Q+R +E + L
Sbjct: 135 TAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LT 191
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPF 238
R +++G + + D + + PF
Sbjct: 192 RFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|387915796|gb|AFK11507.1| transcription initiation factor TFIID subunit 8 [Callorhinchus
milii]
Length = 317
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 81/185 (43%), Gaps = 22/185 (11%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF+ +++A+ L ++ Y+ +G++A Y S R + + D+ L
Sbjct: 49 QVVVSSLLTEAGFEAAEKAAIETLTEMLQSYLCEIGRSAKVYCEHSARTQPTLSDVVVTL 108
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P A P ++ S+
Sbjct: 109 AEMGFN--------VDTVQAYAKRSQRMVITAPPVTNTP---ATPRALSTGQKRQHPSY- 156
Query: 152 QIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
IP+ P FPDP TY ++P+ E SD + + Q+R +E ++
Sbjct: 157 ----------IPSHFPEFPDPHTYIKTPTIREPVSDYQVLREKAASQRRDVERALTRFMA 206
Query: 212 QFSES 216
+ E+
Sbjct: 207 KTGET 211
>gi|351707918|gb|EHB10837.1| Transcription initiation factor TFIID subunit 8 [Heterocephalus
glaber]
Length = 310
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 28/188 (14%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ YI+ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P PK+ L
Sbjct: 98 VEMGFN--------VDTLPAYAKRSQRMVITAPPVTNQPVT-------------PKA--L 134
Query: 152 QIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E ++
Sbjct: 135 TAGQNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERALTR 192
Query: 209 LQRQFSES 216
+ E+
Sbjct: 193 FMAKTGET 200
>gi|147900173|ref|NP_001080509.1| transcription initiation factor TFIID subunit 8 [Xenopus laevis]
gi|82176771|sp|Q7ZYA2.1|TAF8_XENLA RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=TBP-associated factor 8
gi|27696376|gb|AAH43877.1| Tbn-prov protein [Xenopus laevis]
Length = 293
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF + +++A+ L ++ Y++ +G++A Y + R + + DI L
Sbjct: 28 QVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDIVVTL 87
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ A + + ++ A T+ P +P D KP +
Sbjct: 88 IEMGFN--------VDSLPAYAKRSQRMVITAPPVTNNP---VVPKALSAGDNKPHPAH- 135
Query: 152 QIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
IP+ P FPDP TY ++P+ E D + + Q+R +E + L R
Sbjct: 136 ----------IPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERA---LTR 182
Query: 212 QFSESGPSSFVHGDSSKEKKTVESNPFLSAP 242
+++G + + D + + + P LS P
Sbjct: 183 FMAKTGETQSLFKDDTSTFPLIAARP-LSIP 212
>gi|395830831|ref|XP_003788518.1| PREDICTED: uncharacterized protein LOC100950906 [Otolemur
garnettii]
Length = 533
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
+S+++ +V+V QIC+ +G+ Q A L ++ RY+ +G+ + L GR + +V
Sbjct: 5 YSRSLLRVSVVQICQALGWDWVQLGACHLLTNVPERYLQQLGRGCCRSSELQGRTDPSVD 64
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ + + +G+ +REL Y + V F + IP FPV + +
Sbjct: 65 DVGEAFQLMGVS------------------LRELEDYIHRMEPVTFPHRIPSFPVSRHK 105
>gi|345493198|ref|XP_003427022.1| PREDICTED: hypothetical protein LOC100679728 [Nasonia vitripennis]
Length = 989
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++++ + K+ VAQIC+ VG+ + + L + D+ YI V K YA + GR + N+
Sbjct: 4 EYTRNVLKMVVAQICQTVGWHSINSTPLEFMVDLMQEYIFQVSKLTQQYAQVLGRCDANL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ + +D ++EL +Y +P ++P P+ R
Sbjct: 64 DDLGLAFRHMNID------------------LQELAEYVKNVDSIPCVVSVPKLPI--HR 103
Query: 145 KPKSSFLQIG 154
+ +FL+ G
Sbjct: 104 ESHLNFLKPG 113
>gi|157127575|ref|XP_001661097.1| hypothetical protein AaeL_AAEL010857 [Aedes aegypti]
gi|108872883|gb|EAT37108.1| AAEL010857-PA [Aedes aegypti]
Length = 1096
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
++ + KV VAQIC+ +G+ + Q + + + DI +Y+ + + + YA L R + N+
Sbjct: 5 YTHQLLKVVVAQICQTIGWNSIQSTPMELMIDILDQYLRDITRVTHRYAELYNRTDPNLD 64
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
D+ ++G++ G EL +Y + + +P +P+ KD
Sbjct: 65 DVALAYREMGMNLG------------------ELQEYLQFVDPIERPFEVPKYPLPKD 104
>gi|126309865|ref|XP_001370623.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Monodelphis domestica]
Length = 307
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++++ L ++ Y++ +G++A Y + R + + DI L
Sbjct: 38 QVVVSSLLTEAGFESAEKASVETLTEMLQSYLSEIGRSAKSYCEHTARTQPTLSDIVVTL 97
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATD-VPFAYAIPHFPVVKDRKPKSSF 150
++G + V L YA + V A + + PV PK+
Sbjct: 98 VEMGFN------------------VETLPAYAKRSQRMVITAPPVTNQPVT----PKA-- 133
Query: 151 LQIGE---EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
L G+ PP IP+ P FPDP TY ++P+ E SD + + Q+R +E +
Sbjct: 134 LTAGQNKSHPP--HIPSHFPEFPDPHTYIKTPTYRELVSDYQVLREKAASQRRDVERA-- 189
Query: 208 NLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
L R +++G + + D + + PF
Sbjct: 190 -LTRFMAKTGETQSLFKDDVSTFPLIAARPF 219
>gi|449480695|ref|XP_004176569.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 3, partial [Taeniopygia guttata]
Length = 917
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 23/140 (16%)
Query: 33 VAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLE 92
V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + L GR + + D+ +
Sbjct: 1 VSVAQICQALGWDSVQVSACDLLTDVLQRYLQGLGRGCHRXCELYGRTDPILDDVGDAFK 60
Query: 93 DLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQ 152
+G++ + EL Y + V FA+ IP FPV K+ F Q
Sbjct: 61 LMGVN------------------LHELEDYIHNIEPVTFAHQIPSFPVSKNN--VLQFPQ 100
Query: 153 IGE---EPPIEDIPAWLPAF 169
+G E E IP +LP
Sbjct: 101 LGSKDAEERKEYIPDYLPPI 120
>gi|26340678|dbj|BAC34001.1| unnamed protein product [Mus musculus]
Length = 322
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 31/243 (12%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G +P +K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADTAAGPGGSGTRPGSKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ YI+ +G++A Y + R + + DI L ++G + V
Sbjct: 61 EMLQSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN------------------V 102
Query: 117 RELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTY 175
L YA + + P V ++ L G+ P IP+ P FP P TY
Sbjct: 103 DTLPAYAKRSQRMVITA-----PPVTNQPVTPKALTAGQNRPHPPHIPSHFPEFPVPHTY 157
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVES 235
++P+ E SD + + Q+R +E + L R +++G + + D + +
Sbjct: 158 IKTPTYREPVSDYQILREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAA 214
Query: 236 NPF 238
PF
Sbjct: 215 RPF 217
>gi|27666416|ref|XP_234348.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Rattus norvegicus]
gi|109479568|ref|XP_001080948.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Rattus norvegicus]
Length = 308
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 1 MSDGGGESGSKHQQPHTKRKFS-GDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLA 56
M+D G + K+ + D++ A +V V+ + GF++ +++++ L
Sbjct: 1 MADPAARPGGSRTRAGNKQSTNPADNYHLARRRTLQVVVSSLLTEAGFESAEKASVETLT 60
Query: 57 DIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV 116
++ Y++ +G++A Y + R + + DI L ++G + G
Sbjct: 61 EMLQSYLSEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFNVGI---------------- 104
Query: 117 RELIQYANEATD-VPFAYAIPHFPVVKDRKPKSSFLQIGE---EPPIEDIPAWLPAFPDP 172
L YA + V A + + PV PK+ L G+ PP IP+ P FPDP
Sbjct: 105 --LPAYAKRSQRMVITAPPVTNQPVT----PKA--LTAGQNRPHPP--HIPSHFPEFPDP 154
Query: 173 QTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
TY ++P+ E SD + + Q+R +E ++
Sbjct: 155 HTYIKTPTYREPVSDYQVLREKASSQRRDVERALT 189
>gi|223646924|gb|ACN10220.1| Transcription initiation factor TFIID subunit 8 [Salmo salar]
gi|223672787|gb|ACN12575.1| Transcription initiation factor TFIID subunit 8 [Salmo salar]
Length = 308
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++A+ L ++ YI+ VG+ A Y + R + D L
Sbjct: 40 QVVVSSLLTECGFESAEKAAVESLTEMIQSYISEVGRCAKAYCEHTARITPTLSDTVVTL 99
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + +N + + ++ A T+ P IP + ++ S
Sbjct: 100 IEMGFN--------VNTLPVYAKRSQRMVITAPPVTNAPV---IPKALIAGQKRTHPSH- 147
Query: 152 QIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
IP+ P FPDP TY ++P+ E SD + + Q+R +E ++
Sbjct: 148 ----------IPSHFPEFPDPHTYIKTPTFREPVSDYQVVREKAASQRRDVERALTRFMA 197
Query: 212 QFSES 216
+ E+
Sbjct: 198 KTGET 202
>gi|62859677|ref|NP_001016717.1| transcription initiation factor TFIID subunit 8 [Xenopus (Silurana)
tropicalis]
gi|134026122|gb|AAI35895.1| TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated
factor, 43kDa [Xenopus (Silurana) tropicalis]
Length = 274
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++A+ L ++ Y++ +G++A Y + R + + DI L
Sbjct: 9 QVVVSSLLTEAGFESAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDIVVTL 68
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATD-VPFAYAIPHFPVVKDRKPKSSF 150
++G + V L YA + V A + + PVV PK+
Sbjct: 69 IEMGFN------------------VESLPAYAKRSQRMVITAPPVTNNPVV----PKALS 106
Query: 151 LQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
++ P IP+ P FPDP TY ++P+ E D + + Q+R +E + L
Sbjct: 107 AGQNKQHPAH-IPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERA---LT 162
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPFLSAP 242
R +++G + + D + + + P LS P
Sbjct: 163 RFMAKTGETQSLFKDDTSTFPLIAARP-LSIP 193
>gi|123913133|sp|Q28J24.1|TAF8_XENTR RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=TBP-associated factor 8
gi|89267860|emb|CAJ82344.1| taube nuss homolog (TAFII43) [Xenopus (Silurana) tropicalis]
Length = 293
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 95/212 (44%), Gaps = 28/212 (13%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++A+ L ++ Y++ +G++A Y + R + + DI L
Sbjct: 28 QVVVSSLLTEAGFESAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDIVVTL 87
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATD-VPFAYAIPHFPVVKDRKPKSSF 150
++G + V L YA + V A + + PVV PK+
Sbjct: 88 IEMGFN------------------VESLPAYAKRSQRMVITAPPVTNNPVV----PKALS 125
Query: 151 LQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
++ P IP+ P FPDP TY ++P+ E D + + Q+R +E + L
Sbjct: 126 AGQNKQHPAH-IPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERA---LT 181
Query: 211 RQFSESGPSSFVHGDSSKEKKTVESNPFLSAP 242
R +++G + + D + + + P LS P
Sbjct: 182 RFMAKTGETQSLFKDDTSTFPLIAARP-LSIP 212
>gi|324511961|gb|ADY44966.1| Transcription initiation factor TFIID subunit 8 [Ascaris suum]
Length = 373
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 24/160 (15%)
Query: 22 SGDDFS-QAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRA 80
+ DF+ + + + AVA IC++ GF+ + S L L + YI +G + L+GR
Sbjct: 21 TAADFAYRKVLRQAVAAICKQAGFEIIESSILELLTHMISSYILEMGVVTRQFTELAGRT 80
Query: 81 EGNVFDIFQGLEDLGLDQGFSGASD-INHCLASSGIVRELIQYANEATDVPFAYAIPHFP 139
D+ L DLG+ + D + C + +V A P A IP
Sbjct: 81 ISTPSDVVMALIDLGI--AVTELPDFLAKCRSQGSLV-----IAQPKVQAPPATPIP--- 130
Query: 140 VVKDRKPKSSFLQIGEEPPIE-DIPAWLPAFPDPQTYFES 178
L++G P IP LP FPDP TY +
Sbjct: 131 -----------LRVGNARPHHPHIPDSLPPFPDPHTYIRT 159
>gi|307181189|gb|EFN68889.1| Transcription initiation factor TFIID subunit 8 [Camponotus
floridanus]
Length = 291
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
I V I G+ T ++ L L ++ +I G +A Y LSGR E + D+
Sbjct: 12 ILNQVVCSILVECGYDTCEKQVLESLTEMLQSFIVETGASARNYCELSGRTEPLIADVIL 71
Query: 90 GLEDLGL--DQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPK 147
L ++G+ D + A N + + +Q +A +
Sbjct: 72 ALINMGMKVDNIETYAKRQNRTVLPA------LQQQTQAKQL------------------ 107
Query: 148 SSFLQIG---EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEM 204
S LQ G PP IP +LP+FPDP Y +P+ + ++ + ++ Q+R +E
Sbjct: 108 -SILQAGVKQSHPP--HIPNYLPSFPDPHAYIRTPTHKQPVTEYEAIREKVATQKRDIER 164
Query: 205 SMVNLQRQFSESGPSSFVHGDSS 227
++ + E+ S F+ D+S
Sbjct: 165 ALTRFIAKTGETH-SLFLTEDNS 186
>gi|195402233|ref|XP_002059711.1| GJ14147 [Drosophila virilis]
gi|194155925|gb|EDW71109.1| GJ14147 [Drosophila virilis]
Length = 1576
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
++ + + +AQI + +G+ Q + L L DI R+I + + + A + R E N+
Sbjct: 6 YTSELLGIVIAQIAQTIGYSRTQSAPLELLEDILQRFIQELARDLHSQAEHANRVEPNLK 65
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
D F L +L ++ V EL+ Y +PF +P +PV R
Sbjct: 66 DAFLSLRNLNIN------------------VHELLDYIGNVEPIPFVREVPAYPV--KRS 105
Query: 146 PKSSFLQIGEEPPI-------EDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQ 198
+FL+ G + E +P LP P T P ++ASD + ++L K
Sbjct: 106 SNMNFLKPGSAETLTRPVHIFEYLPPMLPTEPTAGTSTRWP---DKASDQ--QHLQLCKL 160
Query: 199 QRKMEMSMV 207
+ E+ +
Sbjct: 161 ESSREVVLT 169
>gi|263359642|gb|ACY70478.1| hypothetical protein DVIR88_6g0015 [Drosophila virilis]
Length = 1576
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 32/189 (16%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
++ + + +AQI + +G+ Q + L L DI R+I + + + A + R E N+
Sbjct: 6 YTSELLGIVIAQIAQTIGYSRTQSAPLELLEDILQRFIQELARDLHSQAEHANRVEPNLK 65
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
D F L +L ++ V EL+ Y +PF +P +PV R
Sbjct: 66 DAFLSLRNLNIN------------------VHELLDYIGNVEPIPFVREVPAYPV--KRS 105
Query: 146 PKSSFLQIGEEPPI-------EDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQ 198
+FL+ G + E +P LP P T P ++ASD + ++L K
Sbjct: 106 SNMNFLKPGSAETLTRPVHIFEYLPPMLPTEPTAGTSTRWP---DKASDQ--QHLQLCKL 160
Query: 199 QRKMEMSMV 207
+ E+ +
Sbjct: 161 ESSREVVLT 169
>gi|307200668|gb|EFN80771.1| Transcription initiation factor TFIID subunit 3 [Harpegnathos
saltator]
Length = 1052
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++S+ I K+ VA IC+ VG+ + + L + D+ Y+ + K + Y+ + GR E N+
Sbjct: 4 EYSRNILKMVVASICQTVGWHSINSTPLEFMVDLMQEYLLRISKLTHQYSEILGRTEPNL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ + + +D + EL +Y V + +P +PV ++
Sbjct: 64 DDLGLAFQYMNID------------------IPELAEYVKNVDSVQYPVQVPQYPVRREN 105
Query: 145 KPKSSFLQIG 154
+FL+ G
Sbjct: 106 --HLNFLKPG 113
>gi|213511346|ref|NP_001135355.1| transcription initiation factor TFIID subunit 8 [Salmo salar]
gi|209736040|gb|ACI68889.1| Transcription initiation factor TFIID subunit 8 [Salmo salar]
Length = 308
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 37/236 (15%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++ + L ++ YI+ VG+ A Y + R + D L
Sbjct: 40 QVVVSSLLTECGFESAEKATVESLTEMIQSYISEVGRCAKAYCEHTARITPTLSDAVVTL 99
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G + ++ + + ++ A T+ P IP + ++ S
Sbjct: 100 NEMGFN--------VDTLPGYAKRSQRMVITAPPVTNAPV---IPKALIAGQKRSHPSH- 147
Query: 152 QIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
IP+ P FPDP TY ++P+ E SD + + Q+R +E + L R
Sbjct: 148 ----------IPSHFPEFPDPHTYIKTPTFREPVSDYQVVREKAASQRRDVERA---LTR 194
Query: 212 QFSESGPSSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSVVLPAKLSKEVALQN 267
+++G E +++ N + PL E+ S L A LS E+ LQ
Sbjct: 195 FMAKTG-----------ETQSLFKNDVTAFPL-ISERPSSIPYLSALLSSELELQT 238
>gi|242009212|ref|XP_002425385.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
gi|212509179|gb|EEB12647.1| transcription initiation factor TFIID subunit, putative [Pediculus
humanus corporis]
Length = 253
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 34 AVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLED 93
+V+ + VGF + ++ AL L ++ I +G +++ Y LSGR E + D+ L +
Sbjct: 16 SVSCLLTEVGFDSAEKIALETLTEMLQSLITELGYSSHCYCELSGRTEPVIGDVVIALVN 75
Query: 94 LGLD-QGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKS-SFL 151
+G+ +G + + R +Q AT +PK S L
Sbjct: 76 MGISLEGIESHARRQN--------RTTVQAPTSAT-----------------QPKQLSIL 110
Query: 152 QIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
Q G ++ P +P + P FPDP Y +P+ + ++ + + Q+R +E ++
Sbjct: 111 QAGVKQTPPSHVPDYFPVFPDPHAYIRTPTHKQPVTEYEAIREKSAIQKRDLERALT 167
>gi|402593372|gb|EJW87299.1| bromodomain associated family protein [Wuchereria bancrofti]
Length = 261
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 22/169 (13%)
Query: 12 HQQPHTKRKFSGDDFS-QAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAA 70
H P T + D+ + + + AVA IC++ GF+T + L L + YIN +
Sbjct: 46 HSLPSTSYSPTVADYVYRRVLRQAVAAICKQAGFETIEADVLELLTHMINSYINELAVTT 105
Query: 71 NFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVP 130
+GR D L DLG V L + EAT
Sbjct: 106 RQMTEHAGRTISTPSDTIMALVDLG------------------TAVSSLPAFLKEATSKG 147
Query: 131 FAYAIPHFPVVKDRKPKSSFLQIG-EEPPIEDIPAWLPAFPDPQTYFES 178
P P V+ L++G P IP WLP FPDP TY +
Sbjct: 148 SLVIAP--PRVQQASHPQQQLRVGSSRPRPPHIPDWLPPFPDPHTYVRT 194
>gi|170577083|ref|XP_001893875.1| Bromodomain associated family protein [Brugia malayi]
gi|158599850|gb|EDP37289.1| Bromodomain associated family protein [Brugia malayi]
Length = 349
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 64/171 (37%), Gaps = 26/171 (15%)
Query: 12 HQQPHTKRKFSGDDFS-QAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAA 70
H P T + D+ + + + AVA IC++ GF+T + L L + YIN +
Sbjct: 11 HSLPSTSYSPTVADYVYRRVLRQAVAAICKQAGFETIEADVLELLTHMINSYINELAVTT 70
Query: 71 NFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVP 130
+GR D L DLG V L + EAT
Sbjct: 71 RQMTEHAGRTISTPSDTIMALVDLG------------------TAVSSLPAFLKEATSKG 112
Query: 131 FAYAIPHFPVVKDRKPKSSFLQIGE---EPPIEDIPAWLPAFPDPQTYFES 178
P P V+ L++G PP IP WLP FPDP TY +
Sbjct: 113 SLVIAP--PRVQQASHPQQQLRVGSSRPRPP--HIPDWLPPFPDPHTYVRT 159
>gi|303274402|ref|XP_003056522.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462606|gb|EEH59898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 323
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 71/169 (42%), Gaps = 25/169 (14%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
F + I VAQIC ++T A +A+I RY+ +G AA+ YA + GRA +V
Sbjct: 4 FIREIEHQVVAQICG--SYETVDLGATQAVAEILSRYLIELGYAAHRYAEIGGRATVDVC 61
Query: 86 DIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRK 145
D+ L LG + S+G + VPF IP V R
Sbjct: 62 DVLFALVGLG--------CTFERLIRSTG-----------SHAVPFTQTIPQRLRV-SRL 101
Query: 146 PKS--SFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEK 192
PK +F ++G P +LP+FPD T RA + +++
Sbjct: 102 PKRAPAFRELG-HSSFPHYPKYLPSFPDEHTLHTHSKYYRRAGGTISDQ 149
>gi|328779115|ref|XP_395210.2| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Apis mellifera]
Length = 297
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
I V I G+ T ++ AL L ++ +I VG++A Y LSGR E + D+
Sbjct: 18 ILNHVVCSILVECGYDTCEKQALEVLTEMLQSFIVEVGESARNYCELSGRTEPLIADVIV 77
Query: 90 GLEDLG--LDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPK 147
L ++G LD L S G + AN P + + +
Sbjct: 78 ALINMGIKLDN-----------LESYG------KRANRTVLPPLQQ--------QTQSKQ 112
Query: 148 SSFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSM 206
+ LQ G ++ IP++LP FPDP Y +P+ + ++ + + Q+R +E ++
Sbjct: 113 LNILQAGVKQSHPSHIPSYLPPFPDPHAYIRTPTHKQPVTEYEAIREKAATQKRDIERAL 172
Query: 207 VNLQRQFSESGPSSFVHGDSS 227
+ E+ S F+ D+S
Sbjct: 173 TRFIAKTGETH-SLFLTEDNS 192
>gi|380024337|ref|XP_003695957.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Apis florea]
Length = 291
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 29/201 (14%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
I V I G+ T ++ AL L ++ +I VG++A Y LSGR E + D+
Sbjct: 12 ILNHVVCSILVECGYDTCEKQALEVLTEMLQSFIVEVGESARNYCELSGRTEPLIADVIV 71
Query: 90 GLEDLG--LDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPK 147
L ++G LD L S G + AN P + + +
Sbjct: 72 ALINMGIKLDN-----------LESYG------KRANRTVLPPLQQ--------QTQSKQ 106
Query: 148 SSFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSM 206
+ LQ G ++ IP++LP FPDP Y +P+ + ++ + + Q+R +E ++
Sbjct: 107 LNILQAGVKQSHPSHIPSYLPPFPDPHAYIRTPTHKQPVTEYEAIREKAATQKRDIERAL 166
Query: 207 VNLQRQFSESGPSSFVHGDSS 227
+ E+ S F+ D+S
Sbjct: 167 TRFIAKTGETH-SLFLTEDNS 186
>gi|332022258|gb|EGI62573.1| Transcription initiation factor TFIID subunit 8 [Acromyrmex
echinatior]
Length = 294
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 36/217 (16%)
Query: 13 QQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANF 72
Q +T+RK SQ I+ + V G+ T ++ L L ++ +I +G +
Sbjct: 4 QTVNTRRKI----LSQVISSILV-----ECGYDTCEKQVLETLTEMLQSFIVEIGASGRN 54
Query: 73 YANLSGRAEGNVFDIFQGLEDLG--LDQGFSGASDINHCLASSGIVRELIQYANEATDVP 130
Y LSGR E + D+ L ++G LD + A S V +Q +A +
Sbjct: 55 YCELSGRTEPLIADVILALINMGIKLDNIETYAK------RQSRTVLPTLQQQTQAKQLN 108
Query: 131 FAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYT 190
A VK P IP +LP+FPDP Y +P+ + ++
Sbjct: 109 ILQA-----GVKQGHPSH-------------IPNYLPSFPDPHAYIRTPTHKQPVTEYEA 150
Query: 191 EKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSS 227
+ ++ Q+R +E ++ + E+ S F+ D+S
Sbjct: 151 IREKVATQKRDIERALTRFIAKTGETH-SLFLTEDNS 186
>gi|327271299|ref|XP_003220425.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Anolis carolinensis]
Length = 330
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 4 GGGESGSKHQQPHTKRKFSGDDFSQA---IAKVAVAQICERVGFQTFQQSALGKLADIAV 60
G SG KH D++ A +V V+ + GF++ +++A+ + ++
Sbjct: 36 AGQRSGGKHS------TTPADNYYLARRRTLQVVVSSLLTEAGFESAEKAAVETMTEMLQ 89
Query: 61 RYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELI 120
YI+ +G++A + R + + DI L ++G + V L
Sbjct: 90 SYISEIGRSAKSVCEHTARTQPTLSDIVVTLIEMGFN------------------VETLP 131
Query: 121 QYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESP 179
YA + + + P V ++ L G+ +P IP P FPDP TY ++P
Sbjct: 132 AYAKRSQRM-----VITAPPVTNQPVTPKALTAGQNKPHPSHIPGHFPEFPDPHTYIKTP 186
Query: 180 SQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
+ E D + + Q+R +E + L R +++G + + D + + PF
Sbjct: 187 TYREPVLDYQILREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAARPF 242
>gi|8926585|gb|AAF81901.1|AF276226_1 architectural regulator of copia enhancer [Drosophila hydei]
Length = 1054
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 32/217 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
+ ++ + V +AQI + +G+ Q + L L DI +R+I + + + A + R E
Sbjct: 3 AEKYTSELLGVVIAQIAQTIGYSRTQSAPLELLEDILLRFIQELARDLHRQAEHANRVEP 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D+ L+++ ++ V EL+ Y +PF IP +PV
Sbjct: 63 NLKDVLLSLKNVSIN------------------VLELLDYIGNVEPIPFVRDIPAYPV-- 102
Query: 143 DRKPKSSFLQIGEEPPI-------EDIPAWLPAFPDPQTYFESPSQNERASDSYT-EKIE 194
R +FL+ G + E +P LP P + R D E I+
Sbjct: 103 KRISNMNFLKPGSVETLTRPVHIFEYLPPMLPTESTPTVSSSHSGSSIRWPDKLEHENIQ 162
Query: 195 LGKQQRKMEMSMVNL----QRQFSESGPSSFVHGDSS 227
L K + E + + L + F+ G S ++S
Sbjct: 163 LCKLELNREPTTIKLVQDVKTDFAAGGISKLCTLNAS 199
>gi|195133998|ref|XP_002011425.1| GI14094 [Drosophila mojavensis]
gi|193912048|gb|EDW10915.1| GI14094 [Drosophila mojavensis]
Length = 1094
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 31/263 (11%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ ++ + V +AQI + +G+ Q L L DI +R+I + + + A + R E N
Sbjct: 3 EKYTSELLGVVIAQIAQTIGYNRTQSVPLELLEDILLRFIQELARDLHSQAEHANRIEPN 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D L+++ ++ V EL+ Y +PF IP +PV
Sbjct: 63 LKDAVLSLKNVNIN------------------VPELLDYIGNVEPIPFVREIPAYPV--K 102
Query: 144 RKPKSSFLQIGEEPPI-------EDIPAWLPAFPDPQTYFESPSQNER-ASDSYTEKIEL 195
R +FL+ G + E +P LP P P + + + R S E ++L
Sbjct: 103 RNSNMNFLKPGSVETLTRPVHIFEYLPPMLPTEPTPTVSCSNSTSSIRWPEKSEHEHLQL 162
Query: 196 GKQQRKMEMSMVNLQRQFSESGP--SSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSV 253
K + E + L + P ++ V G S + S L H +E+SSV
Sbjct: 163 CKLESNREFTTTKLIQDVKNHFPATATVVGGISKLSTQNSSSTDNLDHNGH-AIREISSV 221
Query: 254 VLPAKLSKEVALQNPVAKKHVVD 276
V+ A++ + + +V D
Sbjct: 222 VMTTGGFISPAIEGKLPEAYVPD 244
>gi|158300532|ref|XP_320424.4| AGAP012105-PA [Anopheles gambiae str. PEST]
gi|157013204|gb|EAA00622.4| AGAP012105-PA [Anopheles gambiae str. PEST]
Length = 220
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 80/184 (43%), Gaps = 24/184 (13%)
Query: 33 VAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLE 92
+A++ E GF T ++ AL L ++ ++ +G +A Y L+GR + + D+ L
Sbjct: 17 IAISSQLEEAGFSTAEKDALETLTEMMQSFLVELGHSARNYCELAGRTQPVIGDVVVALV 76
Query: 93 DLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQ 152
++G+ +R L +A + P + + S LQ
Sbjct: 77 NMGIS------------------IRGLDTFAKRE-----GRHVLPQPQQAQAQKQQSILQ 113
Query: 153 IGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
G++ P IP+ LP FPDP Y +P+ + ++ + + +QQR +E ++
Sbjct: 114 AGQKIPHPSYIPSHLPQFPDPHAYIRTPTHKQPVTEYEVIREKAAQQQRDVERALTKFLA 173
Query: 212 QFSE 215
+ SE
Sbjct: 174 KTSE 177
>gi|383847987|ref|XP_003699634.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Megachile rotundata]
Length = 291
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 27/200 (13%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
I V I G+ T ++ AL L ++ +I VG++A Y LSGR E + DI
Sbjct: 12 ILNHVVCSILVECGYDTCEKQALETLTEMLQSFIVEVGESARNYCELSGRTEPLIADIIV 71
Query: 90 GLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKS- 148
L +G+ + L Y P +P P+ + + K
Sbjct: 72 ALISMGIK------------------LDNLENYGKR----PNRTVLP--PLQQQTQSKQL 107
Query: 149 SFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
+ LQ G ++ IP+ LP FPDP Y +P+ + ++ + + Q+R +E ++
Sbjct: 108 NILQAGVKQGHPAHIPSHLPPFPDPHAYIRTPTHKQPVTEYEAIREKAATQKRDIERALT 167
Query: 208 NLQRQFSESGPSSFVHGDSS 227
+ E+ S F+ D+S
Sbjct: 168 RFIAKTGETH-SLFLTDDNS 186
>gi|393907354|gb|EFO16573.2| bromodomain associated family protein [Loa loa]
Length = 339
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
+ + +VA IC++ GF+ + L L + YIN + +GR D
Sbjct: 21 VLRQSVAAICKQAGFEVIEADVLELLTHMVNSYINELAATTRQMTEHAGRTISTPSDTIM 80
Query: 90 GLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSS 149
L DLG V L + EAT P P V+
Sbjct: 81 ALVDLG------------------TAVSNLPSFLKEATSKGSLVIAP--PRVQQASHTQQ 120
Query: 150 FLQIG-EEPPIEDIPAWLPAFPDPQTYFES 178
L++G P +P WLP FPDP TY +
Sbjct: 121 QLRVGSSRPRPSHVPDWLPPFPDPHTYVRT 150
>gi|312092893|ref|XP_003147495.1| bromodomain associated family protein [Loa loa]
Length = 390
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
+ + +VA IC++ GF+ + L L + YIN + +GR D
Sbjct: 72 VLRQSVAAICKQAGFEVIEADVLELLTHMVNSYINELAATTRQMTEHAGRTISTPSDTIM 131
Query: 90 GLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSS 149
L DLG V L + EAT P P V+
Sbjct: 132 ALVDLG------------------TAVSNLPSFLKEATSKGSLVIAP--PRVQQASHTQQ 171
Query: 150 FLQIG-EEPPIEDIPAWLPAFPDPQTYFES 178
L++G P +P WLP FPDP TY +
Sbjct: 172 QLRVGSSRPRPSHVPDWLPPFPDPHTYVRT 201
>gi|320170733|gb|EFW47632.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 467
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 99/257 (38%), Gaps = 40/257 (15%)
Query: 28 QAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDI 87
+AI V Q G + SA+ LAD+ + +I +G A YA +GR EGN D+
Sbjct: 161 RAIIVHLVGQAMRETGMTVAKTSAVDMLADVYIEFIEKIGAVAQAYAEHAGRTEGNANDL 220
Query: 88 FQGLEDLGLDQGFSGASDINHCLA-------SSGIVRELIQYANEATDVPFAYA---IPH 137
L D + A+++ L S +V L T F A
Sbjct: 221 RASLADFSSNARLRSANEMLPDLPFRAGSWNQSNLVNPLDYNTESLTRFLFDSAQGSQEK 280
Query: 138 FPVVKDRKPKSSFLQIGEE----------PPI------------EDIPAWLPAFPDPQTY 175
+V+ R +S F ++ E P+ + IP++LP +P TY
Sbjct: 281 HALVQTRIEESEFRELAERQNDPHYRFFVSPVNMFDDPEAKLVPDFIPSFLPRYPANHTY 340
Query: 176 FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSS-------K 228
+ +R +D + + G QQR + +S+ N +E + V D S
Sbjct: 341 LRTLIMPKRLTDWHQVRPIWGHQQRDVAVSLSNFL-ALTEQHNAEPVSTDKSVQLAKVKP 399
Query: 229 EKKTVESNPFLSAPLHF 245
E VE +P AP+ F
Sbjct: 400 EAVIVEPHPSYCAPIVF 416
>gi|67084085|gb|AAY66977.1| proline rich salivary secreted protein [Ixodes scapularis]
Length = 257
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 34 AVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLED 93
AV IC GF + ++ A+ L ++ ++ + +++ + LSGR + D+F L +
Sbjct: 21 AVCSICLESGFASAERPAVESLVEMLQSCLSEIARSSRAFCELSGRTQVLSGDVFVALIE 80
Query: 94 LGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQI 153
G++ V L + + + P + R LQ
Sbjct: 81 AGIN------------------VESLWAFVKRSNRITLPT-----PSMTPRSSTPKILQA 117
Query: 154 GEE---PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
GE+ PP IP L FPDP Y +P+ + ++ + +L Q+R +E + L
Sbjct: 118 GEKKSLPPY--IPEHLIPFPDPHAYIRTPTHKQPVTEYEAIREKLASQKRDVERA---LT 172
Query: 211 RQFSESGPSSFVHGDSSKEKKTVE----SNPFLSAPL 243
R +++G + + D + + S P+L A L
Sbjct: 173 RFVAKTGNTQSLFADDANLFPLIACKPVSQPYLCALL 209
>gi|123472117|ref|XP_001319254.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121902033|gb|EAY07031.1| hypothetical protein TVAG_311560 [Trichomonas vaginalis G3]
Length = 311
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 56/230 (24%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D+F++ I K+ +AQ ++ GF T ++AL L + + I V + N GR +
Sbjct: 2 SDEFTEQILKIIIAQTAQKCGFSTISETALDILVEAVIANIREVCTNSTRVTNHCGRIDT 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDV--PFAYAIPHFPV 140
N +D+F L +L + S L + ++A + PF + + ++P
Sbjct: 62 NGYDLFFALNNLPNRESVST----------------LTVFLSQADKLITPFEFFVDNYPA 105
Query: 141 V--------------KDRKPKSSFLQIGEEP-------PIE---------DIPAWLPAFP 170
++++P +S ++ E+P P E IPA+ P FP
Sbjct: 106 FEKNINPFYEQQLKPQEQRPMNSEPKLWEKPMPFRIYNPPEMKQSQGKQSHIPAFYPNFP 165
Query: 171 DPQTY-FESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPS 219
+ TY + + E A D+ + + Q NLQ++ E G S
Sbjct: 166 NTYTYQYTATPLPESAPDNTDAEARRSRDQN-------NLQKEIEEMGKS 208
>gi|312371562|gb|EFR19713.1| hypothetical protein AND_21924 [Anopheles darlingi]
Length = 321
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 30/187 (16%)
Query: 33 VAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLE 92
+A++ E VGF T ++ L ++ ++ +G +A Y L+GR + + D+ L
Sbjct: 17 MAISSQLEEVGFSTAEKEVLETFTEMMQSFLVELGHSARNYCELAGRTQPVIGDVVVALI 76
Query: 93 DLGLD-QGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++G+ QG + + R ++ PH P + + S L
Sbjct: 77 NMGISVQGLDAFAKRDG--------RSIL---------------PH-PQQAQAQKQQSIL 112
Query: 152 QIGEE---PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVN 208
Q G++ P IP LPAFPDP Y +P+ + ++ + + Q+R +E ++
Sbjct: 113 QAGQKNSHP--SHIPNHLPAFPDPHAYIRTPTYKQPVTEYEAIREKAASQKRDVEKALTK 170
Query: 209 LQRQFSE 215
+ SE
Sbjct: 171 FLAKTSE 177
>gi|41053603|ref|NP_956580.1| transcription initiation factor TFIID subunit 8 [Danio rerio]
gi|29436446|gb|AAH49422.1| TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated
factor [Danio rerio]
Length = 268
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 24/186 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF + +++ + L ++ YI VG+ A + R+ + D+ L
Sbjct: 40 QVVVSALLTECGFDSAEKAVVETLTEMMQSYITEVGRCAKANCEHTARSTPTLSDVVITL 99
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATD-VPFAYAIPHFPVVKDRKPKSSF 150
++G + V L YA + V A I + PVV PKS
Sbjct: 100 VEMGFN------------------VDTLPVYAKRSQRMVITAPPITNAPVV----PKSLT 137
Query: 151 LQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
P IP+ P FPDP TY +P+ E SD + + Q+R +E ++
Sbjct: 138 AGQKRTHPAH-IPSHFPDFPDPHTYIRTPTFREPVSDYQVVREKAASQRRDVERALTRFM 196
Query: 211 RQFSES 216
+ E+
Sbjct: 197 AKTGET 202
>gi|241998644|ref|XP_002433965.1| secreted salivary gland peptide, putative [Ixodes scapularis]
gi|215495724|gb|EEC05365.1| secreted salivary gland peptide, putative [Ixodes scapularis]
Length = 257
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 34 AVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLED 93
AV IC GF + ++ A+ L ++ + + +++ + LSGR + D+F L +
Sbjct: 21 AVCSICLESGFASAERPAVESLVEMLQSCLAEIARSSRAFCELSGRTQVLSGDVFVALIE 80
Query: 94 LGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQI 153
G++ V L + + + P + R LQ
Sbjct: 81 AGIN------------------VESLWAFVKRSNRITLPT-----PSMTPRSSTPKILQA 117
Query: 154 GEE---PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
GE+ PP IP L FPDP Y +P+ + ++ + +L Q+R +E + L
Sbjct: 118 GEKKSLPPY--IPEHLIPFPDPHAYIRTPTHKQPVTEYEAIREKLASQKRDVERA---LT 172
Query: 211 RQFSESGPSSFVHGDSSKEKKTVE----SNPFLSAPL 243
R +++G + + D + + S P+L A L
Sbjct: 173 RFVAKTGNTQSLFADDANLFPLIACKPVSQPYLCALL 209
>gi|444724390|gb|ELW64995.1| Transcription initiation factor TFIID subunit 3 [Tupaia
chinensis]
Length = 94
Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 45/72 (62%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L GR +
Sbjct: 3 ESYSRSLLRVSVAQICQALGWASVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62
Query: 84 VFDIFQGLEDLG 95
+ D+ + + +G
Sbjct: 63 LDDVSEAFQLMG 74
>gi|82186140|sp|Q6P0T2.1|TAF8_DANRE RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=Protein taube nuss-like; AltName:
Full=TBP-associated factor 8
gi|41107674|gb|AAH65457.1| Taf8 protein [Danio rerio]
Length = 308
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 24/186 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF + +++ + L ++ YI VG+ A + R+ + D+ L
Sbjct: 40 QVVVSALLTECGFDSAEKAVVETLTEMMQSYITEVGRCAKANCEHTARSTPTLSDVVITL 99
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATD-VPFAYAIPHFPVVKDRKPKSSF 150
++G + V L YA + V A I + PVV PKS
Sbjct: 100 VEMGFN------------------VDTLPVYAKRSQRMVITAPPITNAPVV----PKSLT 137
Query: 151 LQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
P IP+ P FPDP TY +P+ E SD + + Q+R +E ++
Sbjct: 138 AGQKRTHPAH-IPSHFPDFPDPHTYIRTPTFREPVSDYQVVREKAASQRRDVERALTRFM 196
Query: 211 RQFSES 216
+ E+
Sbjct: 197 AKTGET 202
>gi|328700739|ref|XP_001945181.2| PREDICTED: hypothetical protein LOC100167514 [Acyrthosiphon pisum]
Length = 906
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 93/238 (39%), Gaps = 52/238 (21%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D+F + +VAQIC +G+ + S L + DI Y + ++ ++ +S E +
Sbjct: 3 DEFIRKGLTTSVAQICSNIGWHSMSNSTLQMMTDILYEYFRDLAQSVKKFSEISDTIEPD 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+ D + V +LI+Y + + F + +P FP+
Sbjct: 63 IDDVKMAFRDKDV------------------AVPDLIRYLKQVGSIEFPHQVPKFPI--- 101
Query: 144 RKPKSSFLQIGEEPPIEDI--PAW----LPAFPDPQTYFESPSQNERASDSYTEKIELGK 197
P S L I + E + P + LP P+ E P QN+R+ ++
Sbjct: 102 --PTKSNLNIMKPGSREIVTRPVYVHEHLPTM-YPEQSDERPMQNDRSQTPHSSS----- 153
Query: 198 QQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFLSAPLHFEEKEVSSVVL 255
+ + N F ES S + SSK+ V H +E+SSVV+
Sbjct: 154 -----SLGIFNEPLSFQESQASKY--DRSSKDNLVV----------HRRLREISSVVM 194
>gi|340726384|ref|XP_003401539.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Bombus terrestris]
gi|350423971|ref|XP_003493649.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Bombus impatiens]
Length = 291
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 89/220 (40%), Gaps = 42/220 (19%)
Query: 13 QQPHTKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANF 72
Q +T+RK I V I G+ T ++ AL L ++ ++ VG++A
Sbjct: 4 QTTNTRRK---------ILNHVVCSILVECGYDTCEKQALEILTEMLQSFLIEVGESARN 54
Query: 73 YANLSGRAEGNVFDIFQGLEDLG--LDQGFSGASDINHCLASSGIVRELIQYANEATDVP 130
Y LSGR E + D+ L ++G LD S N + + + N
Sbjct: 55 YCELSGRTEPLIADVIVALINMGIKLDNLESYGKRANRTVLPQLQQQTQSKQLN------ 108
Query: 131 FAYAIPHFPVVKDRKPKSSFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSY 189
LQ G ++ IP++LP FPDP Y +P+ + ++
Sbjct: 109 -------------------ILQAGVKQSHPSHIPSYLPPFPDPHAYIRTPTHKQPVTEYE 149
Query: 190 TEKIELGKQQRKMEMSMVNLQRQFSESGP--SSFVHGDSS 227
+ + Q+R +E + L R +++G S F+ D+S
Sbjct: 150 AIREKAATQKRDIERA---LTRFIAKTGDTHSLFLTEDNS 186
>gi|432867147|ref|XP_004071050.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Oryzias latipes]
Length = 308
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 79/186 (42%), Gaps = 24/186 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF + +++A+ L ++ YI +G+ A Y + R+ + D L
Sbjct: 40 QVVVSALLTESGFDSAEKAAVETLTEMMQSYITEIGRCAKAYCEHTARSVPTLSDAVLTL 99
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKS-SF 150
++G + ++ + + ++ A T+ P PKS S
Sbjct: 100 IEMGFN--------VDTLPVYAKRSQRMVITAPPVTNAPGT-------------PKSLSA 138
Query: 151 LQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
Q P IP+ LP FPDP TY ++P+ E SD + + Q+R +E ++
Sbjct: 139 GQKRTHP--SHIPSHLPEFPDPHTYIKTPTFREPVSDYQVLREKAASQRRDVERALTRFM 196
Query: 211 RQFSES 216
+ E+
Sbjct: 197 AKTGET 202
>gi|125583362|gb|EAZ24293.1| hypothetical protein OsJ_08045 [Oryza sativa Japonica Group]
Length = 164
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%)
Query: 99 GFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPP 158
GF G S+ SG + EL + +VPF +P K SF G+EPP
Sbjct: 16 GFPGPSNPARPFLRSGALSELAGFVRVVREVPFPKPVPRRGGAPRGKAWESFAAAGKEPP 75
Query: 159 IEDIPAWLPAFPD 171
+ +P WLP FPD
Sbjct: 76 PKHVPRWLPRFPD 88
>gi|195064387|ref|XP_001996560.1| GH23929 [Drosophila grimshawi]
gi|193892106|gb|EDV90972.1| GH23929 [Drosophila grimshawi]
Length = 1591
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
+ ++ + V +AQI + +G+ + Q + L L DI R+I + + + A + R E
Sbjct: 3 AEKYTSDMLGVVIAQIAQTIGYSSTQSAPLELLEDILQRFIQELARDLHSQAEHANRVEL 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D L +L ++ V EL+ Y +PF +P +PV
Sbjct: 63 NLKDALLSLSNLNIN------------------VNELLDYIGNVEPIPFVRDVPIYPV-- 102
Query: 143 DRKPKSSFLQIG 154
R +FL+ G
Sbjct: 103 KRSSNLNFLKPG 114
>gi|17946385|gb|AAL49226.1| RE65343p [Drosophila melanogaster]
Length = 328
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 25/195 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + KV V+Q+ G +L L + I +G +A+ Y LSGR
Sbjct: 13 DPYRRILNKV-VSQLLLDKGAGQASNHSLETLTQMLQALIWEIGNSAHNYCELSGRTMPT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G+ + L Y + T VP IP P
Sbjct: 72 VGDVSLALINMGIS------------------ISNLDPYMRKETHVP----IPLPPQQTQ 109
Query: 144 RKPKSSFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
++P S LQ G + P +P++ P PDP Y +P+ + ++ + + Q+R +
Sbjct: 110 QRPLS-LLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDI 168
Query: 203 EMSMVNLQRQFSESG 217
E ++ + +E+
Sbjct: 169 EKALTKFLCKTTETN 183
>gi|195397547|ref|XP_002057390.1| GJ17059 [Drosophila virilis]
gi|194147157|gb|EDW62876.1| GJ17059 [Drosophila virilis]
Length = 332
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 81/195 (41%), Gaps = 25/195 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + K AV+Q+ G L L + I +G +A+ Y L GR
Sbjct: 14 DAYRRLLNK-AVSQLLLDKGAALASNQCLETLTQMMQALIVEIGNSAHNYCELGGRTMPT 72
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G++ + L Y + VP IP P +
Sbjct: 73 VGDVSLALINMGIN------------------ISSLEPYVRRVSHVP----IP-LPSQQT 109
Query: 144 RKPKSSFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
++ + S LQ G + +P++LPA PDP Y +P+ + ++ + + Q+R +
Sbjct: 110 QQRQLSLLQAGSKASHPHYVPSYLPAMPDPHAYIRTPTHKQPVTEYEAIREKAASQKRDV 169
Query: 203 EMSMVNLQRQFSESG 217
E ++ + +E+
Sbjct: 170 EKALTKFLCKTTETN 184
>gi|17647803|ref|NP_523397.1| TBP-associated factor 8 [Drosophila melanogaster]
gi|71153581|sp|Q9VWY6.1|TAF8_DROME RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=Protein prodos
gi|7293423|gb|AAF48800.1| TBP-associated factor 8 [Drosophila melanogaster]
gi|372099923|gb|AEX66194.1| FI18809p1 [Drosophila melanogaster]
Length = 328
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 81/195 (41%), Gaps = 25/195 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + KV V+Q+ G +L L + I +G +A+ Y LSGR
Sbjct: 13 DPYRRILNKV-VSQLLLDKGAGQASNHSLETLTQMLQALIWEIGNSAHNYCELSGRTMPT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G+ + L Y + T VP IP P
Sbjct: 72 VGDVSLALINMGIS------------------ISNLDPYMRKETHVP----IPLPPQQTQ 109
Query: 144 RKPKSSFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
++P S LQ G + P +P++ P PDP Y +P+ + ++ + + Q+R +
Sbjct: 110 QRPLS-LLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDI 168
Query: 203 EMSMVNLQRQFSESG 217
E ++ + +E+
Sbjct: 169 EKALTKFLCKTTETN 183
>gi|268529374|ref|XP_002629813.1| C. briggsae CBR-TAF-8 protein [Caenorhabditis briggsae]
Length = 482
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 22/146 (15%)
Query: 34 AVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLED 93
V +C + GF ++ AL L I YI +G + ++GR + D++ GL +
Sbjct: 73 VVTAMCYKSGFDDIEEGALETLMLIFHSYIKRIGGQSRLACEMAGRTLVSPGDVWFGLVN 132
Query: 94 LGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQI 153
+G+ VREL + D + H P + + K+ L+I
Sbjct: 133 MGIH------------------VRELSDFHQ---DQVISALTVHAPEIIPPEAKNQALRI 171
Query: 154 GEEPPIED-IPAWLPAFPDPQTYFES 178
G P + + WLP PDP TY ++
Sbjct: 172 GTPRPHPNYVYEWLPPLPDPHTYIKT 197
>gi|195130195|ref|XP_002009538.1| GI15178 [Drosophila mojavensis]
gi|193907988|gb|EDW06855.1| GI15178 [Drosophila mojavensis]
Length = 331
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 24/175 (13%)
Query: 34 AVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLED 93
AV+Q+ G L L + + VG +A+ Y L GR V D+ L +
Sbjct: 23 AVSQLLLDKGASISSNQCLETLTQMLQALLFEVGNSAHSYCELGGRTMPTVGDVSLALIN 82
Query: 94 LGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQI 153
+G++ + L YA P IP P + ++ + S LQ
Sbjct: 83 MGIN------------------ISSLESYARRVNHTP----IP-LPPQQTQQRQLSLLQA 119
Query: 154 GEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
G + P +P++LP PDP Y +P+ + ++ + + Q+R +E ++
Sbjct: 120 GNKAPHPHYVPSYLPPMPDPHAYIRTPTHKQPVTEYEAIREKAASQKRDVEKALT 174
>gi|348502796|ref|XP_003438953.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Oreochromis niloticus]
Length = 308
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 26/187 (13%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++A+ L ++ YI +G+ A Y + R+ + D L
Sbjct: 40 QVVVSALLTESGFESAEKAAVETLTEMLQSYITEIGRCAKAYCEHTARSVPTLSDTVVTL 99
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATD-VPFAYAIPHFPVVKDRKPKS-S 149
++G + V L YA + V A + + PV PK+ S
Sbjct: 100 IEMGFN------------------VDTLPIYAKRSQRMVITAPPVTNAPVT----PKALS 137
Query: 150 FLQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNL 209
Q P IP+ P FPDP TY ++P+ E SD + + Q+R +E ++
Sbjct: 138 AGQKRTHP--AHIPSHFPEFPDPHTYIKTPTFREPVSDYQVVREKAATQRRDVERALTRF 195
Query: 210 QRQFSES 216
+ E+
Sbjct: 196 IAKTGET 202
>gi|195345371|ref|XP_002039243.1| GM22880 [Drosophila sechellia]
gi|194134469|gb|EDW55985.1| GM22880 [Drosophila sechellia]
Length = 330
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 24/194 (12%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
D + I AV+Q+ G +L L + + +G +A+ Y LSGR V
Sbjct: 13 DPYRRILNKAVSQLLVDKGAGQASNQSLETLTQMLQALLWEIGNSAHNYCELSGRTMPTV 72
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ L ++G+ + L Y + T VP IP P +
Sbjct: 73 GDVSLALINMGIS------------------ISNLDPYMRKETHVP----IPLPPQQTQQ 110
Query: 145 KPKSSFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKME 203
+P S LQ G + P +P++ P PDP Y +P+ + ++ + + Q+R +E
Sbjct: 111 RPLS-LLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDIE 169
Query: 204 MSMVNLQRQFSESG 217
++ + +E+
Sbjct: 170 KALTKFLCKTTETN 183
>gi|71896307|ref|NP_001026094.1| transcription initiation factor TFIID subunit 8 [Gallus gallus]
gi|75571472|sp|Q5ZMS1.1|TAF8_CHICK RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=TBP-associated factor 8
gi|53126644|emb|CAG30972.1| hypothetical protein RCJMB04_1f12 [Gallus gallus]
Length = 244
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 27/178 (15%)
Query: 62 YINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQ 121
YI+ +G++A Y + R + + DI L ++G + + A + + ++
Sbjct: 5 YISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VETLPAYAKRSQRMVI 56
Query: 122 YANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESPS 180
A T+ P PK+ L G+ +P IP + P FPDP TY ++P+
Sbjct: 57 TAPPVTNQPVT-------------PKA--LTAGQNKPHPSHIPGYFPEFPDPHTYIKTPT 101
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
E SD + + Q+R +E + L R +++G + + D + + PF
Sbjct: 102 YREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAARPF 156
>gi|357604267|gb|EHJ64117.1| hypothetical protein KGM_08958 [Danaus plexippus]
Length = 1167
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
+++ I + VAQ+C+ +G+ + L L + +YI ++G AN YA R E N+
Sbjct: 5 YAREILRRNVAQVCQTIGWNGINSTPLDILVHVLEKYICTLGTQANRYAEQFNRTEPNLN 64
Query: 86 DIFQGLEDLGL 96
D+ DL +
Sbjct: 65 DLGLVFRDLHI 75
>gi|358414921|ref|XP_003582952.1| PREDICTED: uncharacterized protein LOC100849642 [Bos taurus]
Length = 123
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ +S+++ +V+VAQIC+ +G+ + Q SA L D+ RY+ +G+ + Y+ L G+
Sbjct: 3 ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELCEYRAGD 62
>gi|346473635|gb|AEO36662.1| hypothetical protein [Amblyomma maculatum]
Length = 206
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
Query: 66 VGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANE 125
+ +++ + LSGR D+F L ++G++ V L +A
Sbjct: 9 LARSSRAFCELSGRTVILSGDVFVALIEMGIN------------------VESLWSFAKR 50
Query: 126 ATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIE-DIPAWLPAFPDPQTYFESPSQNER 184
+ +P P ++ R P LQ G++ P+ IP + FPDP Y +P+ +
Sbjct: 51 PNRI----TLPT-PGLQTRSPTPKILQAGDKKPLPPHIPEHMAPFPDPHAYIRTPTHKQP 105
Query: 185 ASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVE----SNPFLS 240
++ + +L Q+R +E + L R +++GP+ + D S + S P+L+
Sbjct: 106 VTEYEAIREKLASQKRDVERA---LTRFVAKTGPTQSLFADQSAPFPLIACKPMSQPYLA 162
Query: 241 A 241
A
Sbjct: 163 A 163
>gi|320168754|gb|EFW45653.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1061
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 33 VAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLE 92
VA + R T + +A L D+ I S+G+AA YA +GR+EGN +D+ L
Sbjct: 14 VAAQALLTRANLATARPAACETLTDVCAALIESLGRAAASYATHAGRSEGNFWDLRIALN 73
Query: 93 DLGL 96
++GL
Sbjct: 74 EVGL 77
>gi|198427898|ref|XP_002122466.1| PREDICTED: similar to TAF8 RNA polymerase II, TATA box binding
protein (TBP)-associated factor, 43kDa [Ciona
intestinalis]
Length = 279
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 36/222 (16%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
+ F Q++ +AVA IC GF++ + L L ++ Y+ VG + Y SGR
Sbjct: 10 NGFRQSLT-MAVAAICLECGFESTENIVLETLTEMLQSYLTEVGNSTRAYYEHSGRTIPT 68
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
D+ L ++G + L+QY+ + + V
Sbjct: 69 DKDVIFALSEMGFRN------------------KSLLQYSRRGKRINIGQIV---KTVDT 107
Query: 144 RKPKSSFLQIGEEPPIEDIPAWLPA------FPDPQTYFESPSQNERASDSYTEKIELGK 197
P LQ+G+ + P ++P FPDP +Y + + + +D + +
Sbjct: 108 SNPP--VLQVGKS---KGFPTYVPENHKYPHFPDPHSYIRTTTGQKPETDYVILREQASA 162
Query: 198 QQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPFL 239
Q+R +E + L R + +G S + D +E+ P L
Sbjct: 163 QKRDVERA---LTRFVARTGRSHPLLPDDKNAFPLIEAQPHL 201
>gi|393246353|gb|EJD53862.1| hypothetical protein AURDEDRAFT_80501 [Auricularia delicata
TFB-10046 SS5]
Length = 256
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 18 KRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLS 77
KR + D QA+ ++ ++Q+ + GF + Q S L L +I + K A+ YANL+
Sbjct: 30 KRAVTPDTARQAVQRLLISQL-KAEGFDSSQASVLDTLCQETEAFIEMLAKRAHDYANLA 88
Query: 78 GRAEGNVFDIFQGLEDL 94
R+ N D+FQ E++
Sbjct: 89 SRSRSNALDMFQTCEEI 105
>gi|2632098|emb|CAA75667.1| Prodos protein [Drosophila melanogaster]
Length = 328
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + KV V+Q+ G +L L + I +G +A+ Y LSGR
Sbjct: 13 DPYRRILNKV-VSQLLLDKGAGQASNHSLETLTQMLQALIWEIGNSAHNYCELSGRTMPT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G+ + L Y + T VP IP P
Sbjct: 72 VGDVSLALINMGIS------------------ISNLDPYMRKETHVP----IPLPPQQTQ 109
Query: 144 RKPKSSFLQIG-EEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
++P S LQ G + P +P++ P PDP Y +P+ + ++ + + +R +
Sbjct: 110 QRPLS-LLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACHKRDI 168
Query: 203 EMSMVNLQRQFSESG 217
E ++ + +E+
Sbjct: 169 EKALTKFLCKTTETN 183
>gi|341900979|gb|EGT56914.1| hypothetical protein CAEBREN_14346 [Caenorhabditis brenneri]
Length = 509
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
+ + V +C + GF ++ AL L I I +G+ + ++GR D++
Sbjct: 81 VLEQVVTAMCYKAGFDDIEEGALETLMLIFHSSIKRIGEQSRLACEIAGRTIVTPGDVWF 140
Query: 90 GLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSS 149
GL ++G+ V+ L + + H P + K+
Sbjct: 141 GLINMGIP------------------VKTLADFHQDQLGSALTV---HAPEITPPDAKTQ 179
Query: 150 FLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIE--LGKQQRKMEMSM 206
L+IG P + + WLP FPDP TY ++ +E A SY EK+ + +++R S+
Sbjct: 180 ALRIGTPRPHPNYVYDWLPPFPDPHTYIKT-EISEEADFSY-EKVREAMAQKKRNGVTSL 237
Query: 207 VN 208
VN
Sbjct: 238 VN 239
>gi|341902834|gb|EGT58769.1| hypothetical protein CAEBREN_14997 [Caenorhabditis brenneri]
Length = 494
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 26/178 (14%)
Query: 34 AVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLED 93
V +C + GF ++ AL L I I +G+ + ++GR D++ GL +
Sbjct: 71 VVTAMCYKAGFDDIEEGALETLMLIFHSSIKRIGEQSRLACEIAGRTIVTPGDVWFGLIN 130
Query: 94 LGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQI 153
+G+ V+ L + + H P + K+ L+I
Sbjct: 131 MGIP------------------VKTLADFHQDQLGSALTV---HAPEITPPDAKTQALRI 169
Query: 154 GEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIE--LGKQQRKMEMSMVN 208
G P + + WLP FPDP TY ++ +E A SY EK+ + +++R S+VN
Sbjct: 170 GTPRPHPNYVYDWLPPFPDPHTYIKT-EISEEADFSY-EKVREAMAQKKRNGVTSLVN 225
>gi|198468843|ref|XP_001354834.2| GA20122 [Drosophila pseudoobscura pseudoobscura]
gi|198146597|gb|EAL31889.2| GA20122 [Drosophila pseudoobscura pseudoobscura]
Length = 323
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 29/197 (14%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + KV ++Q+ G L L ++ +I+ +G +A+ Y LSGR
Sbjct: 13 DVYRRLLGKV-ISQLLLDKGAGQCSAQCLETLTEMLQAFISELGNSAHNYCELSGRTMAT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G + G L Y P P +
Sbjct: 72 VGDVSMALINMGQNIG------------------SLESYLRREQHAPI-----QLPPQQT 108
Query: 144 RKPKSSFLQIGEE---PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQR 200
++ S LQ G + PP +P++ P PDP Y +P+ + ++ + + Q+R
Sbjct: 109 QQRTLSLLQAGTKASHPPY--VPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKR 166
Query: 201 KMEMSMVNLQRQFSESG 217
+E ++ + +E+
Sbjct: 167 DIEKALTKFLCKTTETN 183
>gi|195166878|ref|XP_002024261.1| GL14948 [Drosophila persimilis]
gi|194107634|gb|EDW29677.1| GL14948 [Drosophila persimilis]
Length = 323
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 29/197 (14%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + KV ++Q+ G L L ++ +I+ +G +A+ Y LSGR
Sbjct: 13 DVYRRLLGKV-ISQLLLDKGAGQCSAQCLETLTEMLQAFISELGNSAHNYCELSGRTMAT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G + G L Y P P +
Sbjct: 72 VGDVSMALINMGQNIG------------------SLESYLRREQHAPI-----QLPPQQT 108
Query: 144 RKPKSSFLQIGEE---PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQR 200
++ S LQ G + PP +P++ P PDP Y +P+ + ++ + + Q+R
Sbjct: 109 QQRTLSLLQAGTKASHPPY--VPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKR 166
Query: 201 KMEMSMVNLQRQFSESG 217
+E ++ + +E+
Sbjct: 167 DIEKALTKFLCKTTETN 183
>gi|358056804|dbj|GAA97154.1| hypothetical protein E5Q_03830 [Mixia osmundae IAM 14324]
Length = 497
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D F +++V ++ R FQ+ ++SA+ L +IA RY+ V ++ YA +G+ +
Sbjct: 10 DIFELCVSQVVASEA--RAPFQSVRRSAVSVLCEIATRYLEQVLHSSKAYAEHAGKTSVS 67
Query: 84 VFDIFQGLEDLGLDQG-----FSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPH 137
D+ L D GL++ ++ +N C + + L Y VP YA PH
Sbjct: 68 FRDVRSALRDYGLERRELETYWTSFRQVN-CETTQDALHALASY------VPAHYAAPH 119
>gi|194892272|ref|XP_001977631.1| GG19150 [Drosophila erecta]
gi|190649280|gb|EDV46558.1| GG19150 [Drosophila erecta]
Length = 328
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 79/195 (40%), Gaps = 25/195 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + K AV+Q+ G L L + I +G +A+ Y LSGR
Sbjct: 13 DAYRRLLNK-AVSQLLVDKGAGQASNQGLETLTQMLQALIGEIGNSAHNYCELSGRTMPT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G+ + L Y + T VP IP P
Sbjct: 72 VGDVSLALINMGIS------------------IASLDPYMRKETHVP----IPLPPQQTQ 109
Query: 144 RKPKSSFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
++P S LQ G + +P++ P PDP Y +P+ + ++ + + Q+R +
Sbjct: 110 QRPLS-LLQAGSKSTHPHYVPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDI 168
Query: 203 EMSMVNLQRQFSESG 217
E ++ + +E+
Sbjct: 169 EKALTKFLCKTTETN 183
>gi|71998704|ref|NP_001022513.1| Protein TAF-8, isoform a [Caenorhabditis elegans]
gi|17645991|emb|CAD18882.1| Protein TAF-8, isoform a [Caenorhabditis elegans]
Length = 495
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 35 VAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDL 94
V +C + GF ++ AL L + YI +G+ + F ++GR D++ GL ++
Sbjct: 77 VTAMCYKSGFDDIEEGALETLMLLFHSYIKRIGEQSRFACEVAGRTIVTPGDVWFGLVNM 136
Query: 95 GLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIG 154
G+ ++ Q ++ D + H P + + K+ L+IG
Sbjct: 137 GI---------------------KVNQLSDFHQDQIISALTVHAPEIIPPEAKNQALRIG 175
Query: 155 E-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKME--MSMVN 208
P + WLP PDP TY ++ +E SY EK+ Q+K S+VN
Sbjct: 176 TPRPHPSYVYEWLPPLPDPHTYIKT-EISEDIDFSY-EKVREAMSQKKRNGITSLVN 230
>gi|389615318|dbj|BAM20640.1| TBP-associated factor 8 [Papilio polytes]
Length = 240
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 70/168 (41%), Gaps = 26/168 (15%)
Query: 51 ALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD-QGFSG-ASDINH 108
+L L ++ + +G +A + LSGR E + DI GL ++G+ QG A+ N
Sbjct: 2 SLETLTEMXQCFFTELGNSARGFCELSGRVEPVLNDIVMGLMNMGISIQGIEQYAARPN- 60
Query: 109 CLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEEPPIEDIPAWLPA 168
R +IQ +AT P P + K+ P IP LP
Sbjct: 61 --------RHVIQPPQQAT-------APRTPAMLSAGAKAK--------PAPHIPFHLPP 97
Query: 169 FPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
PDP Y +P+ + ++ + + Q+R +E ++ + SE+
Sbjct: 98 LPDPHAYIRTPTHKQPVTEYEAIREKAATQKRDIEKALTKFLAKTSET 145
>gi|71998708|ref|NP_001022514.1| Protein TAF-8, isoform b [Caenorhabditis elegans]
gi|33300435|emb|CAE18043.1| Protein TAF-8, isoform b [Caenorhabditis elegans]
Length = 497
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 35 VAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDL 94
V +C + GF ++ AL L + YI +G+ + F ++GR D++ GL ++
Sbjct: 77 VTAMCYKSGFDDIEEGALETLMLLFHSYIKRIGEQSRFACEVAGRTIVTPGDVWFGLVNM 136
Query: 95 GLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIG 154
G+ ++ Q ++ D + H P + + K+ L+IG
Sbjct: 137 GI---------------------KVNQLSDFHQDQIISALTVHAPEIIPPEAKNQALRIG 175
Query: 155 E-EPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKME--MSMVN 208
P + WLP PDP TY ++ +E SY EK+ Q+K S+VN
Sbjct: 176 TPRPHPSYVYEWLPPLPDPHTYIKT-EISEDIDFSY-EKVREAMSQKKRNGITSLVN 230
>gi|195481241|ref|XP_002101572.1| GE17709 [Drosophila yakuba]
gi|194189096|gb|EDX02680.1| GE17709 [Drosophila yakuba]
Length = 328
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 25/195 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + K AV+Q+ G +L L + I +G +A+ Y LSGR
Sbjct: 13 DAYRRLLNK-AVSQLLVDKGAGQASNQSLETLTQMMQALIGEIGNSAHNYCELSGRTMPT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G+ + L Y + T VP +P P
Sbjct: 72 VGDVSLALINMGIS------------------IASLDPYMRKETHVP----VPLPPQQTQ 109
Query: 144 RKPKSSFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
++P S LQ G + +P++ P PDP Y +P+ + ++ + + Q+R +
Sbjct: 110 QRPLS-LLQAGSKSTHPHYVPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDI 168
Query: 203 EMSMVNLQRQFSESG 217
E ++ + +E+
Sbjct: 169 EKALTKFLCKTTETN 183
>gi|345778767|ref|XP_003431774.1| PREDICTED: transcription initiation factor TFIID subunit 8 isoform
1 [Canis lupus familiaris]
Length = 234
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 62 YINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQ 121
YI+ +G++A Y + R + + DI L ++G + ++ A + + ++
Sbjct: 5 YISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRSQRMVI 56
Query: 122 YANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESPS 180
A T+ P PK+ L G+ P IP+ P FPDP TY ++P+
Sbjct: 57 TAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTYIKTPT 101
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
E SD + + Q+R +E ++ + E+
Sbjct: 102 YREPVSDYQVLREKAASQRRDVERALTRFMAKTGET 137
>gi|270010530|gb|EFA06978.1| hypothetical protein TcasGA2_TC009938 [Tribolium castaneum]
Length = 287
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 27/180 (15%)
Query: 32 KVAVAQICERV---GFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIF 88
K+ A +C + GF T + +LG L ++ ++ VG + Y LSGR+E V D+
Sbjct: 14 KMLAASVCSILMESGFDTADKESLGTLTEMIQCFLTEVGALSKSYCELSGRSEPVVADVI 73
Query: 89 QGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKS 148
++G + +L+ Y +++ + + +
Sbjct: 74 LAFVEMGHN------------------FNDLMVYTKG-----MKHSVLPPLQPQQPQKQL 110
Query: 149 SFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
+ L G + P+ IP LP FPDP Y +P+ + D + + + Q++ +E ++
Sbjct: 111 NMLPAGSKHPLPPYIPQHLPQFPDPHAYVRTPTHKQPIIDYESVREKAAVQKKDIEKALT 170
>gi|189239427|ref|XP_974753.2| PREDICTED: similar to TBP-associated factor 8 CG7128-PA [Tribolium
castaneum]
Length = 272
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 27/180 (15%)
Query: 32 KVAVAQICERV---GFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIF 88
K+ A +C + GF T + +LG L ++ ++ VG + Y LSGR+E V D+
Sbjct: 14 KMLAASVCSILMESGFDTADKESLGTLTEMIQCFLTEVGALSKSYCELSGRSEPVVADVI 73
Query: 89 QGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKS 148
++G F+ +L+ Y +++ + + +
Sbjct: 74 LAFVEMG--HNFN----------------DLMVYTKG-----MKHSVLPPLQPQQPQKQL 110
Query: 149 SFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMV 207
+ L G + P+ IP LP FPDP Y +P+ + D + + + Q++ +E ++
Sbjct: 111 NMLPAGSKHPLPPYIPQHLPQFPDPHAYVRTPTHKQPIIDYESVREKAAVQKKDIEKALT 170
>gi|449490633|ref|XP_002187090.2| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Taeniopygia guttata]
Length = 244
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 62 YINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQ 121
YI+ +G++A Y + R + + DI L ++G + + A + + ++
Sbjct: 5 YISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VETLPAYAKRSQRMVI 56
Query: 122 YANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESPS 180
A T+ P PK+ L G+ +P IP P FPDP TY ++P+
Sbjct: 57 TAPPVTNQPVT-------------PKA--LTAGQNKPHPPHIPGHFPEFPDPHTYIKTPT 101
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSFVHGDSSKEKKTVESNPF 238
E SD + + Q+R +E + L R +++G + + D + + PF
Sbjct: 102 YREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQSLFKDDVSTFPLIAARPF 156
>gi|297290827|ref|XP_001085409.2| PREDICTED: transcription initiation factor TFIID subunit 8 [Macaca
mulatta]
gi|332234241|ref|XP_003266319.1| PREDICTED: transcription initiation factor TFIID subunit 8 isoform
2 [Nomascus leucogenys]
gi|426353145|ref|XP_004044058.1| PREDICTED: transcription initiation factor TFIID subunit 8 isoform
2 [Gorilla gorilla gorilla]
gi|194381676|dbj|BAG64207.1| unnamed protein product [Homo sapiens]
Length = 234
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 24/156 (15%)
Query: 62 YINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQ 121
YI+ +G++A Y + R + + DI L ++G + ++ A + + ++
Sbjct: 5 YISEIGRSAKSYCEHTARTQPTLSDIVVTLVEMGFN--------VDTLPAYAKRSQRMVI 56
Query: 122 YANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGE-EPPIEDIPAWLPAFPDPQTYFESPS 180
A T+ P PK+ L G+ P IP+ P FPDP TY ++P+
Sbjct: 57 TAPPVTNQPVT-------------PKA--LTAGQNRPHPPHIPSHFPEFPDPHTYIKTPT 101
Query: 181 QNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
E SD + + Q+R +E ++ + E+
Sbjct: 102 YREPVSDYQVLREKAASQRRDVERALTRFMAKTGET 137
>gi|321473927|gb|EFX84893.1| hypothetical protein DAPPUDRAFT_194178 [Daphnia pulex]
Length = 201
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 24/152 (15%)
Query: 21 FSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRA 80
SG + + + +V+ +C GF + +L L ++ ++ +G ++ Y LS R
Sbjct: 10 MSGAASRRKLLQASVSCLCSEAGFSAVDELSLETLTEMMQSFLTELGHSSRLYCELSARV 69
Query: 81 EGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPV 140
E V D+ L +G+ L YA A + +P P
Sbjct: 70 EPVVGDVVMALVSMGIKHN------------------SLESYAQRARRL----VLP-TPT 106
Query: 141 VKDRKPKSSFLQIGEEPPI-EDIPAWLPAFPD 171
+ LQ G++ P IP LPAFPD
Sbjct: 107 QAVATKQIGILQTGQKRPHPSHIPDHLPAFPD 138
>gi|195456724|ref|XP_002075259.1| GK17025 [Drosophila willistoni]
gi|194171344|gb|EDW86245.1| GK17025 [Drosophila willistoni]
Length = 321
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 24/194 (12%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
D + I AV+Q+ + G L L + I +G +A+ Y LSGR V
Sbjct: 13 DAHRRIINKAVSQLLQDKGASQASLQCLETLTQMLQALIVEIGNSAHNYCELSGRTLPTV 72
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDR 144
D+ L ++G++ + L + T P IP P + +
Sbjct: 73 GDVSLALINMGIN------------------ISSLEPHLRRETHTP----IP-LPPQQMQ 109
Query: 145 KPKSSFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKME 203
+ + S LQ G + +P++ PA PDP Y +P+ + ++ + + Q+R +E
Sbjct: 110 QRQLSLLQAGSKSSHPHYVPSYFPAMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDIE 169
Query: 204 MSMVNLQRQFSESG 217
++ + +E+
Sbjct: 170 KALTKFLCKTTETN 183
>gi|406604693|emb|CCH43889.1| Transcription initiation factor TFIID subunit 3 [Wickerhamomyces
ciferrii]
Length = 256
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 26 FSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVF 85
F+ A+ +V V Q+ +GF S + LADI +R++ + A S R E +
Sbjct: 6 FNFALLRVTVIQLLRSIGFDRCAPSLVDILADIYIRHLQLLASECMMLAENSEREEIEIQ 65
Query: 86 DIFQGLEDLGL 96
DI QGL+++G+
Sbjct: 66 DITQGLQNIGM 76
>gi|339244843|ref|XP_003378347.1| putative transcription initiation factor TFIID subunit 3
[Trichinella spiralis]
gi|316972756|gb|EFV56408.1| putative transcription initiation factor TFIID subunit 3
[Trichinella spiralis]
Length = 648
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 65/172 (37%), Gaps = 28/172 (16%)
Query: 34 AVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLED 93
VA I +GF AL L+ + + + KA +A +GR + LED
Sbjct: 31 VVALIMNDIGFHAASTIALDGLSRVFSERMRVLCKAVALFAAHAGRTK-------PVLED 83
Query: 94 LGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQI 153
+GL + G S +RE++ Y + IP FPV + RK K +
Sbjct: 84 VGLAFSWMGIS-----------LREIVDYCAQTKPTSVLLKIPRFPVRRPRKLKFGNDSV 132
Query: 154 GEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMS 205
+ + IP LP PS S E IE ++ KM ++
Sbjct: 133 DSDGRLACIPESLP----------DPSLETEVSKVKVESIETADEELKMSIT 174
>gi|410900294|ref|XP_003963631.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
isoform 2 [Takifugu rubripes]
Length = 268
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 100/240 (41%), Gaps = 28/240 (11%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++A+ L ++ +I VG++A Y + R+ + D L
Sbjct: 40 QVVVSALLTESGFESAEKAAVETLTEMMQSFITEVGRSAKAYCEHTARSIPTLSDTVVTL 99
Query: 92 EDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFL 151
++ GF+ + + S R +I A+ ++ +
Sbjct: 100 ----IEMGFNAETLPVYAKRSQ---RMVITAPPVTNPPVTPKAL----TAGHKRSHPGY- 147
Query: 152 QIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQR 211
IP+ P FPDP TY ++P+ E SD + + Q+R +E + L R
Sbjct: 148 ----------IPSHFPEFPDPHTYIKTPTFREPVSDYQVLREKAASQRRDVERA---LTR 194
Query: 212 QFSESGPSSFVHGDSSKEKKTVESNPFLSAPLHFEEKEV---SSVVLPAKLSKEVALQNP 268
+++G + + D + + N P +E + S VV +K++++ + NP
Sbjct: 195 FMAKTGETQSLFKDDQTDSENTAGNIIADDPGAEKENSMLPPSGVVPSSKVNEDSMIDNP 254
>gi|4584215|emb|CAB40628.1| Bip2 protein [Drosophila melanogaster]
gi|13374081|emb|CAC34474.1| TAFII155 protein [Drosophila melanogaster]
Length = 1408
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + + R E
Sbjct: 3 ADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARNMHRHMEHANRIEP 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 63 NLKDARLSIKNLSIN------------------VQELLDYIGNVAPVGFIRDVPQFPIGK 104
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 105 SV--NMNFLKPGSAETLTRPVYIFEYLPPMQDPE 136
>gi|189233756|ref|XP_001814148.1| PREDICTED: similar to bip2 CG2009-PA [Tribolium castaneum]
Length = 872
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 25 DFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNV 84
++++ K++VA+I + +G+ + + L L DI Y+ + + N YAN G + N+
Sbjct: 4 NYTRDHLKISVAKILQTLGWNSINSTPLEILTDILGNYMGQITRNTNSYANEFGCTQPNL 63
Query: 85 FDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D+G+ S + E ++Y N A A+P +P+ K+
Sbjct: 64 DHLGLTFRDMGI---------------SVPELEEYVRYVNFAA---APSAVPKYPIPKE 104
>gi|6634096|emb|CAB64265.1| BIP2 protein [Drosophila melanogaster]
Length = 1406
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + + R E
Sbjct: 3 ADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEP 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 63 NLKDARLSIKNLSIN------------------VQELLDYIGNVAPVGFIRDVPQFPIGK 104
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 105 SV--NMNFLKPGSAETLTRPVYIFEYLPPMQDPE 136
>gi|195354379|ref|XP_002043675.1| GM26780 [Drosophila sechellia]
gi|194128863|gb|EDW50906.1| GM26780 [Drosophila sechellia]
Length = 483
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + + R E
Sbjct: 3 ADRYASDLALVVVAQITQTIGYSCSLSAPLELLQDILQKFVQEFARDMHGHMEHANRIEP 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 63 NLKDARLSIQNLSIN------------------VQELLDYIGNVEPVGFIRDVPQFPIGK 104
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 105 TL--NMNFLKPGSAETLTRPVYIFEYLPPMQDPE 136
>gi|211938727|gb|ACJ13260.1| RE58915p [Drosophila melanogaster]
Length = 1100
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + + R E
Sbjct: 3 ADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEP 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 63 NLKDARLSIKNLSIN------------------VQELLDYIGNVEPVGFIRDVPQFPIGK 104
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 105 SV--NMNFLKPGSAETLTRPVYIFEYLPPMQDPE 136
>gi|167522862|ref|XP_001745768.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775569|gb|EDQ89192.1| predicted protein [Monosiga brevicollis MX1]
Length = 1004
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 36 AQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLG 95
AQ+ +R GF F++ AL LA+ A Y +G+ + YA+ R+ N+ D+ Q +DL
Sbjct: 88 AQLAQRAGFSGFERQALTTLAEAACNYTLLLGRVSLQYAHFEHRSNINLDDLGQCCDDLH 147
Query: 96 L 96
L
Sbjct: 148 L 148
>gi|24638625|ref|NP_651923.2| bip2 [Drosophila melanogaster]
gi|7304310|gb|AAF59342.1| bip2 [Drosophila melanogaster]
Length = 1406
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + + R E
Sbjct: 3 ADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEP 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 63 NLKDARLSIKNLSIN------------------VQELLDYIGNVEPVGFIRDVPQFPIGK 104
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 105 SV--NMNFLKPGSAETLTRPVYIFEYLPPMQDPE 136
>gi|21430224|gb|AAM50790.1| LD24176p [Drosophila melanogaster]
Length = 370
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + + R E
Sbjct: 3 ADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHRHMEHANRIEP 62
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 63 NLKDARLSIKNLSIN------------------VQELLDYIGNVEPVGFIRDVPQFPIGK 104
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 105 SV--NMNFLKPGSAETLTRPVYIFEYLPPMQDPE 136
>gi|384488518|gb|EIE80698.1| hypothetical protein RO3G_05403 [Rhizopus delemar RA 99-880]
Length = 506
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D F ++ ++ +I + GF++ ++ L D+ ++ +G + YANL+GR G
Sbjct: 3 DAFCSSMLEIVTQRIIQSSGFESATSQSIRTLNDVFREHLELLGSTISAYANLNGRTIGT 62
Query: 84 VFDIFQGLEDL 94
D+ +E+L
Sbjct: 63 ACDLLDTMEEL 73
>gi|193713718|ref|XP_001949510.1| PREDICTED: hypothetical protein LOC100161166 [Acyrthosiphon
pisum]
Length = 590
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
DDF + ++VAQIC +G+ + S++ + DI YI+ + K + YA A +
Sbjct: 2 DDFIRQTLTISVAQICNNIGWHSITDSSMKIMTDILHHYISDLSKTSKKYAE---HAYND 58
Query: 84 VFDI 87
V DI
Sbjct: 59 VPDI 62
>gi|328773760|gb|EGF83797.1| hypothetical protein BATDEDRAFT_84525 [Batrachochytrium
dendrobatidis JAM81]
Length = 288
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 81/203 (39%), Gaps = 24/203 (11%)
Query: 20 KFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGR 79
+ +G Q + + A+I ++VGF++ ALG+L Y+ + YA L+G
Sbjct: 69 QLTGSLLCQ-VHQTICARILQQVGFESISAEALGELESTLDHYLFDLTDRIRIYAELNGH 127
Query: 80 AEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIV---REL----IQYANEATDVPFA 132
+ DI GL G+ +D+ HC A I +EL I + TD
Sbjct: 128 TRPTLQDISMGLVYFGV-----SLTDL-HCYAKEFITSHQQELSNVPITLHSAPTDQSVW 181
Query: 133 YAIPHF--PVVKDRKPKSSFLQIGEEPPIEDIPAWL----PAFPDPQTYFESPSQNERAS 186
A P F P + K + + ++ P W+ P P P +Y S +
Sbjct: 182 EANPFFSNPTLLTEKTMTK----ADGQSLQLSPKWMKSHFPPLPPPHSYLSSKIPMHPDT 237
Query: 187 DSYTEKIELGKQQRKMEMSMVNL 209
+ E + +Q R ME ++ L
Sbjct: 238 EGVKEISDSIEQARLMERNLKKL 260
>gi|366987083|ref|XP_003673308.1| hypothetical protein NCAS_0A03610 [Naumovozyma castellii CBS
4309]
gi|342299171|emb|CCC66919.1| hypothetical protein NCAS_0A03610 [Naumovozyma castellii CBS
4309]
Length = 354
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
+ ++F ++ +V++ Q+ + GF T ++ + L D+ +RY+N + A G A
Sbjct: 3 ADNEFHFSLLRVSIIQLLKAEGFDTATKTTVNTLTDLYIRYLNKLSSEITSVAQSRGAAS 62
Query: 82 GNVFDIFQGLEDLGL 96
+ DI QG ++L L
Sbjct: 63 IAIQDISQGFQNLRL 77
>gi|410900292|ref|XP_003963630.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
isoform 1 [Takifugu rubripes]
Length = 308
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 24/186 (12%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+V V+ + GF++ +++A+ L ++ +I VG++A Y + R+ + D L
Sbjct: 40 QVVVSALLTESGFESAEKAAVETLTEMMQSFITEVGRSAKAYCEHTARSIPTLSDTVVTL 99
Query: 92 EDLGLD-QGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSF 150
++G + + + + + + +A + P +
Sbjct: 100 IEMGFNAETLPVYAKRSQRMVITAPPVTNPPVTPKALTAGHKRSHPGY------------ 147
Query: 151 LQIGEEPPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQ 210
IP+ P FPDP TY ++P+ E SD + + Q+R +E ++
Sbjct: 148 -----------IPSHFPEFPDPHTYIKTPTFREPVSDYQVLREKAASQRRDVERALTRFM 196
Query: 211 RQFSES 216
+ E+
Sbjct: 197 AKTGET 202
>gi|345566340|gb|EGX49283.1| hypothetical protein AOL_s00078g316 [Arthrobotrys oligospora ATCC
24927]
Length = 454
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 29 AIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIF 88
++ +++ AQ+ G + S L L D+ RY+ +G A + S R E +V D+
Sbjct: 10 SLLRISTAQMLRHAGLAGSRPSVLDSLTDMTARYLTLLGTTARSISESSNREESDVPDVL 69
Query: 89 QGLEDLGL 96
+E +GL
Sbjct: 70 CAMEQVGL 77
>gi|170589625|ref|XP_001899574.1| Bromodomain associated family protein [Brugia malayi]
gi|158593787|gb|EDP32382.1| Bromodomain associated family protein [Brugia malayi]
Length = 1391
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 32/157 (20%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
+ +D++ +V ++ + +GF T +S L L D+ RY+ + + +A +GR
Sbjct: 69 ASEDYALHYLTRSVVKMMDNIGFSTCHESVLNILTDVCRRYMEKLWVDSKLFAEHAGRR- 127
Query: 82 GNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV 141
F IF+ + FS A EL + + PF +P FPV
Sbjct: 128 ---FPIFEDANMVFGKLMFSAA--------------ELHSFMKQVQCDPFENNVPLFPV- 169
Query: 142 KDRKPKSSFL---------QIGEEPPIEDIPAWLPAF 169
RK + L ++ E P E IP + PA
Sbjct: 170 --RKSSLNLLSMYGPVSDKELAERP--EHIPRYFPAM 202
>gi|195469351|ref|XP_002099601.1| GE14514 [Drosophila yakuba]
gi|194185702|gb|EDW99313.1| GE14514 [Drosophila yakuba]
Length = 1413
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + R E
Sbjct: 2 ADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFARDMHGQMEHANRIEP 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 62 NLNDARLSIKNLSIN------------------VQELLDYIGNVEPVGFIRDVPQFPIGK 103
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 104 SV--NMNFLKPGSAETLTRPVYIFEYLPPMQDPE 135
>gi|195060254|ref|XP_001995774.1| GH17580 [Drosophila grimshawi]
gi|193896560|gb|EDV95426.1| GH17580 [Drosophila grimshawi]
Length = 332
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/197 (19%), Positives = 81/197 (41%), Gaps = 25/197 (12%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
+ D + + + K ++Q+ G L L + + +G +++ Y L GR
Sbjct: 11 NSDAYRRVLNKT-ISQMLLDKGAVLASNQCLETLTQMMQSLLVEIGNSSHNYCELGGRTM 69
Query: 82 GNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV 141
V D+ L ++G++ G + + AN AT IP P
Sbjct: 70 PTVGDVNLALINMGINVGS---------------LEAFSRRANVAT-------IP-LPAQ 106
Query: 142 KDRKPKSSFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQR 200
+ ++ + + LQ G + +P++ P PDP TY +P+ + ++ + + Q+R
Sbjct: 107 QTQQRQLNLLQAGTKASHPHYVPSYFPPMPDPHTYIRTPTYRQPVTEYEAIRKKAASQKR 166
Query: 201 KMEMSMVNLQRQFSESG 217
+E ++ + SE+
Sbjct: 167 DVEKALTKFLCKTSETN 183
>gi|145553086|ref|XP_001462218.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430056|emb|CAK94845.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 30 IAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQ 89
+ K+ VAQ+ G + Q+ + LA+ ++ I VG + L GR EG++F +
Sbjct: 15 LMKIYVAQMLLNSGVSSCQEQGINLLAEFLIKMIRKVGSNSRRLYELQGRQEGDIFHVLM 74
Query: 90 GLEDLGL 96
L+ L +
Sbjct: 75 ALDQLSV 81
>gi|402594618|gb|EJW88544.1| hypothetical protein WUBG_00544 [Wuchereria bancrofti]
Length = 1408
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 32/157 (20%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
+ +D++ +V ++ + +GF T +S L L D+ RY+ + + +A +GR
Sbjct: 69 ASEDYALHYLTRSVVKMMDNIGFSTCHESVLNILTDVCRRYMEKLWVDSKLFAEHAGRR- 127
Query: 82 GNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV 141
F IF+ + FS A EL + + PF +P FPV
Sbjct: 128 ---FPIFEDANMVFGKLMFSAA--------------ELHAFMKQVQCDPFENNVPLFPV- 169
Query: 142 KDRKPKSSFL---------QIGEEPPIEDIPAWLPAF 169
RK + L ++ E P E IP + PA
Sbjct: 170 --RKSLPNLLSMYGPVSDKELAERP--EHIPRYFPAM 202
>gi|194913567|ref|XP_001982727.1| GG16447 [Drosophila erecta]
gi|190647943|gb|EDV45246.1| GG16447 [Drosophila erecta]
Length = 1418
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 23/154 (14%)
Query: 23 GDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEG 82
D ++ +A V VAQI + +G+ + L L DI +++ + + + R E
Sbjct: 2 ADRYASDLALVVVAQITQTIGYSCTLSAPLELLQDILQKFVQEFAQDMHGQMEHANRIEP 61
Query: 83 NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVK 142
N+ D +++L ++ V+EL+ Y V F +P FP+ K
Sbjct: 62 NLKDARLSIKNLSIN------------------VQELLDYIGNVEPVGFIRDVPQFPIGK 103
Query: 143 DRKPKSSFLQIGEEPPIED---IPAWLPAFPDPQ 173
+FL+ G + I +LP DP+
Sbjct: 104 SV--NMNFLKPGNAETLTRPVYIFEYLPPMQDPE 135
>gi|5912256|emb|CAB56032.1| hypothetical protein [Homo sapiens]
Length = 681
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 18/97 (18%)
Query: 47 FQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDI 106
Q SA L D+ RY+ +G+ + Y+ L GR + + D+ + + +G+
Sbjct: 4 VQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPILDDVGEAFQLMGVS--------- 54
Query: 107 NHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ EL Y + V F + IP FPV K+
Sbjct: 55 ---------LHELEDYIHNIEPVTFPHQIPSFPVSKN 82
>gi|391330744|ref|XP_003739814.1| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Metaseiulus occidentalis]
Length = 247
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 73/194 (37%), Gaps = 24/194 (12%)
Query: 17 TKRKFSGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANL 76
T S + + + + AV GF + AL L ++ + + +A YA L
Sbjct: 2 TSSSASASEVYRKVIRNAVCATALEQGFSSCDALALETLTEVLQATLIEICHSAKAYAEL 61
Query: 77 SGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIP 136
GR E + D+ + D G+ G ++E I+ + T
Sbjct: 62 GGRTEASGADVCLAIVDSGIR--MEG-------------LKEFIRRPRKVTL-------- 98
Query: 137 HFPVVKDRKPKSSFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIEL 195
P+ + R LQ GE + + IP P FPD Y + + + ++ + +L
Sbjct: 99 SAPMAQPRVSTPRTLQTGERKNLPNYIPDHFPPFPDSHAYVHTSTHRQPVTEYVAIREKL 158
Query: 196 GKQQRKMEMSMVNL 209
Q+R +E ++
Sbjct: 159 ASQKRDIERALTRF 172
>gi|323303679|gb|EGA57466.1| Taf8p [Saccharomyces cerevisiae FostersB]
Length = 510
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 158 PIE-DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
P+E IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL + S
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHI 229
Query: 217 GPSS 220
+S
Sbjct: 230 SSAS 233
>gi|151946049|gb|EDN64280.1| TFIID subunit [Saccharomyces cerevisiae YJM789]
gi|259148460|emb|CAY81705.1| Taf8p [Saccharomyces cerevisiae EC1118]
Length = 510
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 158 PIE-DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
P+E IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL + S
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHI 229
Query: 217 GPSS 220
+S
Sbjct: 230 SSAS 233
>gi|323347257|gb|EGA81531.1| Taf8p [Saccharomyces cerevisiae Lalvin QA23]
Length = 510
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 158 PIE-DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
P+E IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL + S
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHI 229
Query: 217 GPSS 220
+S
Sbjct: 230 SSAS 233
>gi|323336139|gb|EGA77410.1| Taf8p [Saccharomyces cerevisiae Vin13]
Length = 510
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 158 PIE-DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
P+E IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL + S
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHI 229
Query: 217 GPSS 220
+S
Sbjct: 230 SSAS 233
>gi|190408133|gb|EDV11398.1| transcription initiation factor TFIID subunit 8 [Saccharomyces
cerevisiae RM11-1a]
gi|323352924|gb|EGA85224.1| Taf8p [Saccharomyces cerevisiae VL3]
Length = 510
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 158 PIE-DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
P+E IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL + S
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHI 229
Query: 217 GPSS 220
+S
Sbjct: 230 SSAS 233
>gi|6323522|ref|NP_013593.1| Taf8p [Saccharomyces cerevisiae S288c]
gi|2497066|sp|Q03750.1|TAF8_YEAST RecName: Full=Transcription initiation factor TFIID subunit 8;
AltName: Full=TAFII-65; AltName: Full=TBP-associated
factor 65 kDa; AltName: Full=TBP-associated factor 8
gi|798886|emb|CAA89104.1| unknown [Saccharomyces cerevisiae]
gi|256270052|gb|EEU05298.1| Taf8p [Saccharomyces cerevisiae JAY291]
gi|285813889|tpg|DAA09784.1| TPA: Taf8p [Saccharomyces cerevisiae S288c]
gi|349580175|dbj|GAA25335.1| K7_Taf8p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297209|gb|EIW08309.1| Taf8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 510
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 158 PIE-DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
P+E IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL + S
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHI 229
Query: 217 GPSS 220
+S
Sbjct: 230 SSAS 233
>gi|403356544|gb|EJY77869.1| hypothetical protein OXYTRI_00490 [Oxytricha trifallax]
Length = 374
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 15/117 (12%)
Query: 35 VAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDL 94
VA + FQT + AL + D+ Y+ +GK Y L+GR E N+ D L
Sbjct: 41 VALVLLDKNFQTCENIALYAVTDLMKEYMRELGKEIKSYTELNGRTESNLIDTLNAL--- 97
Query: 95 GLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYA-IPHFPVVKDRKPKSSF 150
N+ + ++ + E + P+ Y + DRK +S
Sbjct: 98 -----------YNYDMPKEKLIEHMESRGRELSLTPYKYGYLEEHQFAMDRKVRSKM 143
>gi|198462037|ref|XP_001352319.2| GA15182 [Drosophila pseudoobscura pseudoobscura]
gi|198139921|gb|EAL29265.2| GA15182 [Drosophila pseudoobscura pseudoobscura]
Length = 1497
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D +S + ++ +AQI + +G+ + + L L DI ++++ + + + R E N
Sbjct: 3 DKYSSDLMRIVIAQITQTIGYSSTLSAPLELLQDILLKFMQEFARDLHGQMEHANRLEPN 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D L+ L ++ V EL+ Y V F+ + FP+
Sbjct: 63 LKDARLTLKSLSIN------------------VHELLDYIGNVEPVAFSRDVAAFPI--K 102
Query: 144 RKPKSSFLQIG 154
R +FL+ G
Sbjct: 103 RASNMNFLKPG 113
>gi|344302430|gb|EGW32704.1| hypothetical protein SPAPADRAFT_149783 [Spathaspora passalidarum
NRRL Y-27907]
Length = 488
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
Query: 52 LGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLDQGFSGASDINHCL- 110
L +L D+ +R++N + + + Y L R + + D+ G+D A +I+ C
Sbjct: 56 LDELTDLTIRFLNDLVGSLSEYTRLQRRQKPALSDMKLLFNLKGIDFN-EIAEEISLCRN 114
Query: 111 --ASSGIVREL-------IQYANEATDVPFAYAIPHFPVVKDRKPKSSFL--QIGEEPPI 159
S +V E+ IQ +E + P P + + + + + L ++ +P
Sbjct: 115 FKKSQSLVTEMKRVENQIIQAQSERNNTEVEENSPSLPFIINEQYEITNLVPRLNTKPSY 174
Query: 160 EDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNL 209
+P +LP FP TY +P E +D +++L + R +E + NL
Sbjct: 175 --VPGYLPDFPPDFTYQSTPKYMETITDLKELRLKLVSESRMIEKPLYNL 222
>gi|195172552|ref|XP_002027061.1| GL18176 [Drosophila persimilis]
gi|194112839|gb|EDW34882.1| GL18176 [Drosophila persimilis]
Length = 1497
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D +S + ++ +AQI + +G+ + + L L DI ++++ + + + R E N
Sbjct: 3 DKYSSDLMRIVIAQITQTIGYSSTLSAPLELLQDILLKFMQEFARDLHGQMEHANRLEPN 62
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
+ D L+ L ++ V EL+ Y V F+ + FP+
Sbjct: 63 LKDARLTLKSLSIN------------------VHELLDYIGNVEPVAFSRDVAAFPI--K 102
Query: 144 RKPKSSFLQIG 154
R +FL+ G
Sbjct: 103 RASNMNFLKPG 113
>gi|365763648|gb|EHN05174.1| Taf8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 510
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 162 IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSS 220
IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL + S +S
Sbjct: 175 IPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHISSAS 233
>gi|194768102|ref|XP_001966152.1| GF19371 [Drosophila ananassae]
gi|190623037|gb|EDV38561.1| GF19371 [Drosophila ananassae]
Length = 322
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 25/195 (12%)
Query: 24 DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGN 83
D + + + KV ++Q+ G L L + I +G +A+ + LSGR
Sbjct: 13 DAYRRLLNKV-ISQLMLDKGAGQASHQCLETLTQMLQALIVEIGNSAHNFCELSGRTMPT 71
Query: 84 VFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKD 143
V D+ L ++G+ + L Y P IP P +
Sbjct: 72 VGDVSLALINMGIS------------------ISSLDPYMRSEKHAP----IP-LPPQQT 108
Query: 144 RKPKSSFLQIGEEPPIED-IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKM 202
++ + + LQ G + +P++ P+ PDP Y +P+ + ++ + + Q+R +
Sbjct: 109 QQRQLNLLQAGSKSSHPHYVPSYFPSMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDI 168
Query: 203 EMSMVNLQRQFSESG 217
E ++ + SE+
Sbjct: 169 EKALTKFLCKTSETN 183
>gi|365759199|gb|EHN01003.1| Taf8p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 514
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 158 PIEDI-PAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQF 213
P+E + P+WLP FP TY +P N +D T K E+ K+ ++ E +++NL ++
Sbjct: 170 PLEKLMPSWLPNFPPDHTYRFTPEFNHPITDLKTIKREIVKESKESEKALLNLNKRL 226
>gi|157114473|ref|XP_001652288.1| hypothetical protein AaeL_AAEL006856 [Aedes aegypti]
gi|108877278|gb|EAT41503.1| AAEL006856-PA [Aedes aegypti]
Length = 335
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 34/178 (19%)
Query: 44 FQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD-QGFS- 101
F++ + + L ++ +I +G+ A Y L+GR + + D+ GL ++G+ +G
Sbjct: 28 FESADKECVETLTEMMQCFIVELGQTARNYCELAGRTQPVIGDVVIGLINMGISIRGLES 87
Query: 102 -GASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVVKDRKPKSSFLQIGEE---P 157
G + H LA + Q S LQ G++ P
Sbjct: 88 YGKREGRHILAQPQQAQSQKQL--------------------------SILQAGQKHNHP 121
Query: 158 PIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSE 215
IP +LP+ PDP Y +P+ + ++ + + Q+R +E ++ + S+
Sbjct: 122 --SHIPNYLPSLPDPHAYIRTPTYKQPVTEYEAIREKAATQKRDIEKALTKFLAKTSD 177
>gi|401842374|gb|EJT44592.1| TAF8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 514
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 158 PIEDI-PAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQF 213
P+E + P+WLP FP TY +P N +D T K E+ K+ ++ E +++NL ++
Sbjct: 170 PLEKLMPSWLPNFPPDHTYRFTPEFNHPITDLKTIKREIVKESKESEKALLNLNKRL 226
>gi|366989449|ref|XP_003674492.1| hypothetical protein NCAS_0B00310 [Naumovozyma castellii CBS 4309]
gi|342300356|emb|CCC68115.1| hypothetical protein NCAS_0B00310 [Naumovozyma castellii CBS 4309]
Length = 564
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 162 IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSE 215
IP WLPAFP TY +P N+ +D K +L ++ +K E S++NL +E
Sbjct: 183 IPNWLPAFPPDHTYKFTPQFNKPITDQVLIKQKLIEEGKKSEKSLLNLLNDITE 236
>gi|207342607|gb|EDZ70326.1| YML114Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 226
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 158 PIE-DIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQF 213
P+E IP+WLP FP TY +P N +D T K E+ K+ ++ E +++NL +
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSL 226
>gi|367009796|ref|XP_003679399.1| hypothetical protein TDEL_0B00590 [Torulaspora delbrueckii]
gi|359747057|emb|CCE90188.1| hypothetical protein TDEL_0B00590 [Torulaspora delbrueckii]
Length = 541
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 157 PPIEDIPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
P I IP W+PAFP TY +P N+ +D + + + ++ E+++++L + +
Sbjct: 155 PLIRYIPKWMPAFPPDHTYKFTPQYNQPITDETIIRRRIVDEGKQSEVALLHLLKNMNPP 214
Query: 217 GPSSFVHGDSSKE 229
PSS G S E
Sbjct: 215 TPSSDADGASYDE 227
>gi|395534143|ref|XP_003769107.1| PREDICTED: transcription initiation factor TFIID subunit 8
[Sarcophilus harrisii]
Length = 300
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 162 IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSF 221
IP+ P FPDP TY ++P+ E SD + + Q+R +E + L R +++G +
Sbjct: 139 IPSHFPEFPDPHTYIKTPTYRELVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQS 195
Query: 222 VHGDSSKEKKTVESNPF 238
+ D + + PF
Sbjct: 196 LFKDDVSTFPLIAARPF 212
>gi|345309051|ref|XP_001518012.2| PREDICTED: transcription initiation factor TFIID subunit 8-like
[Ornithorhynchus anatinus]
Length = 295
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 162 IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSESGPSSF 221
IP+ P FPDP TY ++P+ E SD + + Q+R +E + L R +++G +
Sbjct: 134 IPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERA---LTRFMAKTGETQS 190
Query: 222 VHGDSSKEKKTVESNPF 238
+ D + + PF
Sbjct: 191 LFKDDVSTFPLIAARPF 207
>gi|344338975|ref|ZP_08769905.1| protein of unknown function DUF1738 [Thiocapsa marina 5811]
gi|343800895|gb|EGV18839.1| protein of unknown function DUF1738 [Thiocapsa marina 5811]
Length = 555
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 9/148 (6%)
Query: 9 GSKHQQPHTKRKFSGDDFSQAIAKVAVAQICERVGF-QTFQQSALGKLADIAVRYINSVG 67
G KH ++ GD +I + V+ IC+ V F + + +A +ADIAV+ N+ G
Sbjct: 38 GKKHIDDVLYAEYPGDGDFWSIECLKVSAICDLVDFARRIEIAAQCNIADIAVKSANAHG 97
Query: 68 KAANFYANLSGRAEG--NVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANE 125
+ NL+G+ G + DI L + L++ D+ L +GI+ + E
Sbjct: 98 --GTYLRNLAGKWNGADEMRDINARLTKMILER----IQDLIKYLGDNGILNNSGESIAE 151
Query: 126 ATDVPFAYAIPHFPVVKDRKPKSSFLQI 153
D P AY VK S L I
Sbjct: 152 LDDFPVAYDFVSSTPVKSLDLDSVLLTI 179
>gi|392568698|gb|EIW61872.1| hypothetical protein TRAVEDRAFT_35317 [Trametes versicolor
FP-101664 SS1]
Length = 279
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 5 GGESGSKHQQPHTKRKFSG--DDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRY 62
GG S PH+ + G + + + V+ GF++ + AL +L +
Sbjct: 49 GGTSAQPQVGPHSAPELPGVTPQLASHVMERLVSSELRDAGFESAEAGALRRLEREVAEF 108
Query: 63 INSVGKAANFYANLSGRAEGNVFDIFQGLEDLGLD 97
+ + + A+ YANL+ RA D+F D G++
Sbjct: 109 VQELYERAHDYANLAHRANPIATDVFAAANDYGME 143
>gi|313227349|emb|CBY22495.1| unnamed protein product [Oikopleura dioica]
Length = 257
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 18/155 (11%)
Query: 22 SGDDFSQAIAKVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAE 81
S +F + K A+ ++ + + + AL LADI + ++++G + L R
Sbjct: 7 SSTEFIRCAVKRAIVKMVIKSEYDHVESVALDSLADIFLDIMSNIGFKTKEFCELGSRTL 66
Query: 82 GNVFDIFQGLEDLGLDQGFSGASDINHCLASSGIVRELIQYANEATDVPFAYAIPHFPVV 141
V DI +L +D S + ++ I+ AN IP P V
Sbjct: 67 ATVNDITSATVELDIDLPESLKDVLGKNTEYPPHKKDRIEEAN----------IPEPPAV 116
Query: 142 KDRKPKSSFLQIGEEPPIEDIPAWLPAFPDPQTYF 176
K P+ + ++P +P+P TY
Sbjct: 117 KTIAPRQEHASCVND--------YMPVYPEPHTYL 143
>gi|47229098|emb|CAG03850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 220
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 162 IPAWLPAFPDPQTYFESPSQNERASDSYTEKIELGKQQRKMEMSMVNLQRQFSES 216
IP+ P FPDP TY ++P+ E SD + + Q+R +E ++ + E+
Sbjct: 100 IPSHFPEFPDPHTYIKTPTFREPVSDYQVLREKAASQRRDVERALTRFMAKTGET 154
>gi|326433394|gb|EGD78964.1| hypothetical protein PTSG_01938 [Salpingoeca sp. ATCC 50818]
Length = 980
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 32 KVAVAQICERVGFQTFQQSALGKLADIAVRYINSVGKAANFYANLSGRAEGNVFDIFQGL 91
+ AV I ++ GF+ +Q+A +LA +A +I + A AN GR E N D+ +
Sbjct: 11 RAAVTAIAKKAGFKHAEQNATEQLASVAQAFIRQMAINALGNANEEGRHEINADDVDAAM 70
Query: 92 EDLGLD 97
E + ++
Sbjct: 71 ESVNVN 76
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,682,172,426
Number of Sequences: 23463169
Number of extensions: 234507114
Number of successful extensions: 438492
Number of sequences better than 100.0: 375
Number of HSP's better than 100.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 437829
Number of HSP's gapped (non-prelim): 476
length of query: 361
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 217
effective length of database: 8,980,499,031
effective search space: 1948768289727
effective search space used: 1948768289727
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)