Query 018055
Match_columns 361
No_of_seqs 189 out of 1216
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 05:45:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018055.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018055hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 3.3E-67 7.1E-72 506.5 29.7 289 34-343 24-346 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 6.4E-65 1.4E-69 486.0 28.0 285 38-343 1-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 1.4E-55 3E-60 415.1 20.6 264 37-342 1-280 (281)
4 PRK15381 pathogenicity island 100.0 8.9E-55 1.9E-59 422.6 21.3 259 33-341 138-399 (408)
5 cd01846 fatty_acyltransferase_ 100.0 1.7E-51 3.6E-56 384.8 22.8 259 39-341 1-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 2.7E-39 5.9E-44 302.9 20.3 278 32-343 24-333 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 2E-23 4.4E-28 188.9 10.7 219 40-339 1-234 (234)
8 cd01832 SGNH_hydrolase_like_1 99.0 9.3E-09 2E-13 90.1 12.1 181 39-341 1-184 (185)
9 cd01836 FeeA_FeeB_like SGNH_hy 98.8 2.8E-08 6.1E-13 87.7 10.7 181 39-341 4-187 (191)
10 cd01823 SEST_like SEST_like. A 98.8 2.6E-08 5.7E-13 92.3 10.8 233 39-341 2-258 (259)
11 cd01839 SGNH_arylesterase_like 98.8 1.1E-07 2.3E-12 85.3 13.8 192 39-341 1-203 (208)
12 cd01844 SGNH_hydrolase_like_6 98.7 4.4E-07 9.4E-12 79.3 13.9 172 39-341 1-175 (177)
13 cd01830 XynE_like SGNH_hydrola 98.7 1.6E-07 3.6E-12 84.0 11.2 33 169-202 100-132 (204)
14 cd04501 SGNH_hydrolase_like_4 98.7 6.1E-07 1.3E-11 78.5 14.4 104 170-341 78-181 (183)
15 cd01838 Isoamyl_acetate_hydrol 98.6 5.1E-07 1.1E-11 79.6 11.4 109 170-341 87-197 (199)
16 cd01825 SGNH_hydrolase_peri1 S 98.6 2.5E-07 5.5E-12 81.1 8.9 107 170-341 76-183 (189)
17 PRK10528 multifunctional acyl- 98.6 9.3E-07 2E-11 78.4 12.2 24 319-342 159-182 (191)
18 cd01827 sialate_O-acetylestera 98.5 1.7E-06 3.7E-11 76.0 13.2 182 39-342 2-186 (188)
19 cd01821 Rhamnogalacturan_acety 98.5 1.2E-06 2.6E-11 77.8 12.4 108 170-341 89-196 (198)
20 cd04506 SGNH_hydrolase_YpmR_li 98.5 1.6E-06 3.4E-11 77.3 12.3 102 169-341 100-203 (204)
21 cd01824 Phospholipase_B_like P 98.5 1.2E-05 2.6E-10 76.0 17.7 177 108-343 83-283 (288)
22 PF13472 Lipase_GDSL_2: GDSL-l 98.3 6.1E-06 1.3E-10 70.5 11.6 74 167-263 81-154 (179)
23 cd01820 PAF_acetylesterase_lik 98.3 4.8E-06 1E-10 75.0 10.5 100 170-341 108-208 (214)
24 cd01835 SGNH_hydrolase_like_3 98.3 1.1E-05 2.5E-10 71.1 12.6 20 322-341 172-191 (193)
25 cd01822 Lysophospholipase_L1_l 98.2 2.2E-05 4.8E-10 67.9 12.5 23 320-342 153-175 (177)
26 cd01831 Endoglucanase_E_like E 98.1 9E-05 2E-09 64.1 13.1 21 321-341 146-166 (169)
27 cd01834 SGNH_hydrolase_like_2 98.0 9.8E-05 2.1E-09 64.5 11.5 107 170-342 84-191 (191)
28 cd01833 XynB_like SGNH_hydrola 97.8 0.00018 4E-09 61.1 10.0 97 170-342 59-156 (157)
29 cd00229 SGNH_hydrolase SGNH_hy 97.7 0.00024 5.2E-09 60.1 9.5 100 170-341 86-186 (187)
30 cd01829 SGNH_hydrolase_peri2 S 97.6 0.00046 1E-08 61.0 10.5 109 169-342 89-197 (200)
31 cd01841 NnaC_like NnaC (CMP-Ne 97.6 0.00034 7.5E-09 60.5 9.4 102 170-341 70-172 (174)
32 cd01828 sialate_O-acetylestera 97.6 0.0004 8.8E-09 59.8 8.8 97 171-341 68-166 (169)
33 cd04502 SGNH_hydrolase_like_7 97.2 0.0033 7.1E-08 54.2 9.6 100 170-341 69-169 (171)
34 cd01826 acyloxyacyl_hydrolase_ 96.7 0.0096 2.1E-07 56.1 9.5 34 168-201 146-181 (305)
35 PF14606 Lipase_GDSL_3: GDSL-l 96.5 0.011 2.4E-07 51.6 7.4 166 38-340 2-174 (178)
36 COG2755 TesA Lysophospholipase 96.3 0.095 2.1E-06 46.8 12.8 22 322-343 187-208 (216)
37 cd01840 SGNH_hydrolase_yrhL_li 96.2 0.025 5.4E-07 47.8 7.9 22 320-341 127-148 (150)
38 KOG3035 Isoamyl acetate-hydrol 95.4 0.033 7.3E-07 49.6 5.8 111 170-341 95-206 (245)
39 KOG3670 Phospholipase [Lipid t 95.1 0.88 1.9E-05 44.4 14.6 32 316-347 323-354 (397)
40 cd01842 SGNH_hydrolase_like_5 79.2 33 0.00071 30.1 10.6 20 322-341 161-180 (183)
41 PLN02757 sirohydrochlorine fer 76.9 7.4 0.00016 33.2 6.0 64 177-268 60-126 (154)
42 cd03416 CbiX_SirB_N Sirohydroc 68.5 12 0.00027 28.9 5.1 54 176-257 45-98 (101)
43 cd00384 ALAD_PBGS Porphobilino 66.5 23 0.00051 33.6 7.2 64 172-258 48-111 (314)
44 PF02633 Creatininase: Creatin 65.8 14 0.0003 33.7 5.6 63 172-266 83-145 (237)
45 PRK13384 delta-aminolevulinic 62.2 30 0.00065 33.0 7.0 64 172-258 58-121 (322)
46 PRK09283 delta-aminolevulinic 62.1 30 0.00065 33.1 7.1 64 172-258 56-119 (323)
47 PF01903 CbiX: CbiX; InterPro 61.0 8.9 0.00019 29.9 2.9 54 177-258 39-92 (105)
48 cd04823 ALAD_PBGS_aspartate_ri 60.9 28 0.00062 33.1 6.7 65 172-258 51-116 (320)
49 PF00490 ALAD: Delta-aminolevu 58.3 37 0.00079 32.5 6.9 65 173-258 55-119 (324)
50 cd04824 eu_ALAD_PBGS_cysteine_ 55.4 39 0.00084 32.2 6.6 66 172-258 48-114 (320)
51 cd03412 CbiK_N Anaerobic cobal 49.4 69 0.0015 26.1 6.6 53 174-257 55-107 (127)
52 cd03414 CbiX_SirB_C Sirohydroc 47.3 71 0.0015 25.2 6.3 52 176-257 46-97 (117)
53 PF08885 GSCFA: GSCFA family; 43.6 94 0.002 28.8 7.1 84 169-269 146-229 (251)
54 PF08029 HisG_C: HisG, C-termi 42.7 21 0.00045 26.6 2.2 22 176-197 51-72 (75)
55 TIGR03455 HisG_C-term ATP phos 41.0 33 0.00071 27.0 3.2 23 175-197 74-96 (100)
56 COG2845 Uncharacterized protei 40.1 1.3E+02 0.0028 29.0 7.4 145 134-341 162-315 (354)
57 PRK13717 conjugal transfer pro 38.8 53 0.0011 27.0 4.1 26 223-248 70-95 (128)
58 COG3240 Phospholipase/lecithin 37.0 37 0.00081 33.1 3.5 40 169-208 126-165 (370)
59 COG0113 HemB Delta-aminolevuli 36.4 84 0.0018 29.9 5.6 65 172-257 58-122 (330)
60 PF06908 DUF1273: Protein of u 35.5 85 0.0018 27.4 5.2 29 168-196 22-50 (177)
61 PF02402 Lysis_col: Lysis prot 32.9 10 0.00022 25.0 -0.7 23 6-30 1-23 (46)
62 PRK13660 hypothetical protein; 32.8 2.3E+02 0.005 24.9 7.5 27 170-196 24-50 (182)
63 KOG2794 Delta-aminolevulinic a 31.0 1.4E+02 0.0031 27.9 6.0 28 172-199 66-93 (340)
64 TIGR02744 TrbI_Ftype type-F co 28.8 99 0.0021 24.9 4.1 26 223-248 57-82 (112)
65 PRK10081 entericidin B membran 27.1 97 0.0021 20.9 3.2 15 6-20 2-16 (48)
66 PF04272 Phospholamban: Phosph 24.8 1.5E+02 0.0033 19.6 3.7 20 5-24 27-46 (52)
67 KOG4079 Putative mitochondrial 23.8 34 0.00074 28.4 0.7 22 186-207 42-64 (169)
68 PF10916 DUF2712: Protein of u 23.8 63 0.0014 27.1 2.2 23 6-28 1-23 (146)
69 PF03627 PapG_N: PapG carbohyd 23.5 31 0.00066 30.3 0.3 41 6-53 1-42 (226)
70 PF07172 GRP: Glycine rich pro 23.3 67 0.0015 25.0 2.2 14 17-30 12-25 (95)
71 TIGR01091 upp uracil phosphori 22.8 1.7E+02 0.0038 26.0 5.1 50 174-260 135-184 (207)
72 COG0276 HemH Protoheme ferro-l 22.8 2.3E+02 0.0051 27.2 6.2 79 177-268 104-201 (320)
73 COG1209 RfbA dTDP-glucose pyro 22.5 3.8E+02 0.0083 25.2 7.3 34 236-277 114-147 (286)
74 PF09125 COX2-transmemb: Cytoc 21.6 1.7E+02 0.0037 18.5 3.2 21 7-27 14-34 (38)
75 PF09677 TrbI_Ftype: Type-F co 21.1 2.1E+02 0.0046 22.9 4.8 25 224-248 57-81 (111)
76 cd00419 Ferrochelatase_C Ferro 20.9 2.7E+02 0.0058 22.9 5.6 19 177-195 79-97 (135)
77 PF08282 Hydrolase_3: haloacid 20.7 42 0.00092 29.6 0.7 17 36-52 201-217 (254)
78 cd03411 Ferrochelatase_N Ferro 20.3 1.1E+02 0.0023 26.0 3.1 23 177-199 101-123 (159)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=3.3e-67 Score=506.49 Aligned_cols=289 Identities=26% Similarity=0.511 Sum_probs=241.3
Q ss_pred CCCccEEEEcCCcccccCCCC---CCCCCCCCCCCCCCCC-CCCcCCCCCcchHHHHHHhcCC-CCCCCccCcC--CCCC
Q 018055 34 KCEFEAIFNFGDSNSDTGGFW---AAFPAQSGPFGMTYFK-RPAGRASDGRLIVDFLAQALGL-PFLSPYLQSI--GSDY 106 (361)
Q Consensus 34 ~~~~~~l~vFGDSlsD~Gn~~---~~~~~~~~PyG~~~~~-~~~GRfSnG~vw~d~la~~lg~-~~~p~yl~~~--~~~~ 106 (361)
...+++|||||||++|+||.. ...+++.+|||++|++ +|+||||||++|+||||+.||+ +.+||||.+. +.++
T Consensus 24 ~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~~~ 103 (351)
T PLN03156 24 CAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNISDF 103 (351)
T ss_pred cCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCchhh
Confidence 355899999999999999963 2335678999999985 7999999999999999999999 8889999753 4678
Q ss_pred CccceeeeccccccCCCCcccccCccCccHHHHHHHHHHHHHHHh---------h---------hc-CCCCC-C-C----
Q 018055 107 RHGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVD---------E---------FH-SSCTS-A-I---- 161 (361)
Q Consensus 107 ~~G~NfA~gGA~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~---------~---------~~-gnD~~-~-~---- 161 (361)
.+|+|||+|||++.+.+.... ..++|..||++|..+++++. . ++ +|||. + .
T Consensus 104 ~~GvNFA~agag~~~~~~~~~----~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~~~ 179 (351)
T PLN03156 104 ATGVCFASAGTGYDNATSDVL----SVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTFPG 179 (351)
T ss_pred cccceeecCCccccCCCcccc----CccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcccc
Confidence 999999999999886543211 24689999999987654321 0 22 37872 1 1
Q ss_pred --CccChhhhHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHH
Q 018055 162 --GIGGVKQFLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKE 239 (361)
Q Consensus 162 --~~~~~~~~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~ 239 (361)
...+++++++.+++.+.+.|++||++|||+|+|+|+||+||+|..+.... .+..+|.+.+|++++.||++|+.
T Consensus 180 ~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~-----~~~~~C~~~~n~~~~~~N~~L~~ 254 (351)
T PLN03156 180 RRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNL-----MGGSECVEEYNDVALEFNGKLEK 254 (351)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcC-----CCCCCchHHHHHHHHHHHHHHHH
Confidence 11245678888999999999999999999999999999999998765321 13467999999999999999999
Q ss_pred HHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCc
Q 018055 240 ALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDY 319 (361)
Q Consensus 240 ~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~y 319 (361)
++++|++++|+++|+++|+|+++.++++||++|||++++++||+.| .++ ....|+.. . ...|++|++|
T Consensus 255 ~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~~~aCCg~g--~~~--~~~~C~~~----~----~~~C~~p~~y 322 (351)
T PLN03156 255 LVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVTSVACCATG--MFE--MGYLCNRN----N----PFTCSDADKY 322 (351)
T ss_pred HHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCcccCCccccCCC--CCC--CccccCCC----C----CCccCCccce
Confidence 9999999999999999999999999999999999999999999875 554 45679754 1 2589999999
Q ss_pred eecCCCChhHHHHHHHHHHHHcCC
Q 018055 320 VSWDGIHATEAANKLTTWAILNGS 343 (361)
Q Consensus 320 lfwD~~HPT~~~h~~iA~~~~~~~ 343 (361)
+|||++|||+++|++||+.++++.
T Consensus 323 vfWD~~HPTe~a~~~iA~~~~~~l 346 (351)
T PLN03156 323 VFWDSFHPTEKTNQIIANHVVKTL 346 (351)
T ss_pred EEecCCCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999864
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=6.4e-65 Score=486.05 Aligned_cols=285 Identities=40% Similarity=0.674 Sum_probs=238.9
Q ss_pred cEEEEcCCcccccCCCCCCC---CCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCC-CCCccCcC-CCCCCcccee
Q 018055 38 EAIFNFGDSNSDTGGFWAAF---PAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPF-LSPYLQSI-GSDYRHGANY 112 (361)
Q Consensus 38 ~~l~vFGDSlsD~Gn~~~~~---~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~-~p~yl~~~-~~~~~~G~Nf 112 (361)
++|||||||+||+||..... +++.+|||++|+++|+||||||++|+||||+.||++. +|+|+... +.++.+|+||
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~~p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~~~~~~~G~Nf 80 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPGRPTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNGSSDFLTGVNF 80 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCCCCCccccCCchhhhhhhhhccCCCCCCCccCccccchhhcccee
Confidence 47999999999999975432 3568999999998999999999999999999999998 66776643 2467889999
Q ss_pred eeccccccCCCCcccccCccCccHHHHHHHHHHHHHHHhh------------------hc-CCCCCC---CC---ccChh
Q 018055 113 ATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVDE------------------FH-SSCTSA---IG---IGGVK 167 (361)
Q Consensus 113 A~gGA~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~------------------~~-gnD~~~---~~---~~~~~ 167 (361)
|+|||++.+.+... ..+++|..||++|++++++... ++ +|||.. .. ..++.
T Consensus 81 A~gGA~~~~~~~~~----~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~ 156 (315)
T cd01837 81 ASGGAGILDSTGFL----GSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFANPTRQYEVE 156 (315)
T ss_pred cccCCccccCCcce----eeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhcCccccCCHH
Confidence 99999999765421 1457999999999987653210 22 488721 11 23567
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhc
Q 018055 168 QFLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRN 247 (361)
Q Consensus 168 ~~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~ 247 (361)
++++.+++++.++|++||++|||+|+|+|+||+||+|.++.... .+..+|.+.+|++++.||++|+++|++|+++
T Consensus 157 ~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~-----~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~ 231 (315)
T cd01837 157 AYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFG-----GDGGGCLEELNELARLFNAKLKKLLAELRRE 231 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcC-----CCCCCcCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999876532 1346899999999999999999999999999
Q ss_pred CCCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCCh
Q 018055 248 LPNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHA 327 (361)
Q Consensus 248 ~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HP 327 (361)
+|+++|+++|+|++++++++||++|||++++++||+.| .++ ....|... + ...|.+|++|+|||++||
T Consensus 232 ~~~~~i~~~D~y~~~~~i~~np~~yGf~~~~~aCc~~g--~~~--~~~~c~~~----~----~~~C~~p~~y~fwD~~Hp 299 (315)
T cd01837 232 LPGAKFVYADIYNALLDLIQNPAKYGFENTLKACCGTG--GPE--GGLLCNPC----G----STVCPDPSKYVFWDGVHP 299 (315)
T ss_pred CCCcEEEEEehhHHHHHHHhChhhcCCcCCCcCccCCC--CCC--cccccCCC----C----CCcCCCccceEEeCCCCh
Confidence 99999999999999999999999999999999999876 332 24567643 1 468999999999999999
Q ss_pred hHHHHHHHHHHHHcCC
Q 018055 328 TEAANKLTTWAILNGS 343 (361)
Q Consensus 328 T~~~h~~iA~~~~~~~ 343 (361)
|+++|++||+.+++|.
T Consensus 300 T~~~~~~ia~~~~~g~ 315 (315)
T cd01837 300 TEAANRIIADALLSGP 315 (315)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 9999999999999874
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.4e-55 Score=415.14 Aligned_cols=264 Identities=23% Similarity=0.225 Sum_probs=210.8
Q ss_pred ccEEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecc
Q 018055 37 FEAIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLA 116 (361)
Q Consensus 37 ~~~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gG 116 (361)
|++||||||||+|+||...+. ++ ++|+||||||++++|++++.+|++.. +...+.+..+|+|||+||
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~-----~~-----~~~~gRFsnG~~~~d~~~~~~~~~~~---~~~~~~~~~~G~NfA~gG 67 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG-----VG-----AAGGGRFTVNDGSIWSLGVAEGYGLT---TGTATPTTPGGTNYAQGG 67 (281)
T ss_pred CCceEEecCcccccCCCCccc-----cC-----CCCCcceecCCcchHHHHHHHHcCCC---cCcCcccCCCCceeeccC
Confidence 579999999999999975432 11 35699999999999999999998654 222344678899999999
Q ss_pred ccccCCCCcccccCccCccHHHHHHHHHHHHHHHh------hhc-CCCCC----CCC-----ccChhhhHHHHHHHHHHH
Q 018055 117 STVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVD------EFH-SSCTS----AIG-----IGGVKQFLPQVVSQIAGT 180 (361)
Q Consensus 117 A~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~------~~~-gnD~~----~~~-----~~~~~~~i~~~v~~i~~~ 180 (361)
|++.+.+..... ....++|.+||++|++...... .++ +|||. ... ..++.++++.+++++.++
T Consensus 68 a~~~~~~~~~~~-~~~~~~l~~Qv~~f~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (281)
T cd01847 68 ARVGDTNNGNGA-GAVLPSVTTQIANYLAAGGGFDPNALYTVWIGGNDLIAALAALTTATTTQAAAVAAAATAAADLASQ 146 (281)
T ss_pred ccccCCCCcccc-ccCCCCHHHHHHHHHHhcCCCCCCeEEEEecChhHHHHHHhhccccccchhhHHHHHHHHHHHHHHH
Confidence 999975432100 0134699999999998764321 123 48871 111 123567889999999999
Q ss_pred HHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccch
Q 018055 181 VEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHS 260 (361)
Q Consensus 181 v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~ 260 (361)
|++|+++|||+|+|+++||+||+|.++... ..|.+.++++++.||++|+.+|++|+++ +|+++|+|.
T Consensus 147 v~~L~~~GAr~ilv~~lpplgc~P~~~~~~---------~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~ 213 (281)
T cd01847 147 VKNLLDAGARYILVPNLPDVSYTPEAAGTP---------AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTAT 213 (281)
T ss_pred HHHHHHCCCCEEEEeCCCCcccCcchhhcc---------chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHH
Confidence 999999999999999999999999877542 2578899999999999999999998764 899999999
Q ss_pred HHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHH
Q 018055 261 VLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAIL 340 (361)
Q Consensus 261 ~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~ 340 (361)
+++++++||++|||++++++||+.+ +.+ .|+.. + ...|.+|++|+|||++||||++|++||++++
T Consensus 214 ~~~~i~~nP~~yGf~~~~~~CC~~~-~~~------~~~~~----~----~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~ 278 (281)
T cd01847 214 LLKEVVANPAAYGFTNTTTPACTST-SAA------GSGAA----T----LVTAAAQSTYLFADDVHPTPAGHKLIAQYAL 278 (281)
T ss_pred HHHHHHhChHhcCccCCCccccCCC-Ccc------ccccc----c----ccCCCCccceeeccCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999865 222 25432 1 3579999999999999999999999999988
Q ss_pred cC
Q 018055 341 NG 342 (361)
Q Consensus 341 ~~ 342 (361)
+.
T Consensus 279 ~~ 280 (281)
T cd01847 279 SR 280 (281)
T ss_pred Hh
Confidence 63
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=8.9e-55 Score=422.63 Aligned_cols=259 Identities=17% Similarity=0.176 Sum_probs=205.2
Q ss_pred CCCCccEEEEcCCcccccCCC-CCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccce
Q 018055 33 SKCEFEAIFNFGDSNSDTGGF-WAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGAN 111 (361)
Q Consensus 33 ~~~~~~~l~vFGDSlsD~Gn~-~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~N 111 (361)
+...|++||+|||||||+||. +..+....||||..| +||||||++|+|||| .|||+. .+|+|
T Consensus 138 ~~~~~~ai~vFGDSlsDtGnn~y~~t~~~~PPyG~~f----tGRFSNG~v~~DfLA-------~~pyl~------~~G~N 200 (408)
T PRK15381 138 SLGDITRLVFFGDSLSDSLGRMFEKTHHILPSYGQYF----GGRFTNGFTWTEFLS-------SPHFLG------KEMLN 200 (408)
T ss_pred ccCCCCeEEEeCCccccCCCccccccccCCCCCCCCC----CcccCCCchhhheec-------cccccC------CCCce
Confidence 346799999999999999764 222234579999987 899999999999999 356764 26899
Q ss_pred eeeccccccCCCCcccccCccCccHHHHHHHHHHHHHHH-hhhc-CCCCCCCCccChhhhHHHHHHHHHHHHHHHHHcCC
Q 018055 112 YATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARV-DEFH-SSCTSAIGIGGVKQFLPQVVSQIAGTVEELYALGG 189 (361)
Q Consensus 112 fA~gGA~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~-~~~~-gnD~~~~~~~~~~~~i~~~v~~i~~~v~~L~~~GA 189 (361)
||+|||++......... +...++|..||++|+...+.+ .-++ +|||... ..++++.+++++.++|++||++||
T Consensus 201 FA~GGA~~~t~~~~~~~-~~~~~~L~~Qv~~~~~~~~aL~lV~iG~NDy~~~----~~~~v~~vV~~~~~~l~~Ly~lGA 275 (408)
T PRK15381 201 FAEGGSTSASYSCFNCI-GDFVSNTDRQVASYTPSHQDLAIFLLGANDYMTL----HKDNVIMVVEQQIDDIEKIISGGV 275 (408)
T ss_pred Eeecccccccccccccc-cCccCCHHHHHHHHHhcCCcEEEEEeccchHHHh----HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999732111000 012368999999977532111 1133 4888421 345788899999999999999999
Q ss_pred cEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhCC
Q 018055 190 RTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQNP 269 (361)
Q Consensus 190 r~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP 269 (361)
|+|+|+|+||+||+|..+... ..+.+|+++..||++|+.+|++|++++|+++|+++|+|+++.++++||
T Consensus 276 Rk~vV~nlpPlGC~P~~~~~~-----------~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP 344 (408)
T PRK15381 276 NNVLVMGIPDLSLTPYGKHSD-----------EKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAA 344 (408)
T ss_pred cEEEEeCCCCCCCcchhhccC-----------chHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCH
Confidence 999999999999999876321 146899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 018055 270 TSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 270 ~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 341 (361)
++|||++++. ||+.| .++ ....|.+. ...|. +|+|||.+|||+++|++||+.+-+
T Consensus 345 ~~yGF~~~~~-cCg~G--~~~--~~~~C~p~---------~~~C~---~YvFWD~vHPTe~ah~iiA~~~~~ 399 (408)
T PRK15381 345 SNIGYDTENP-YTHHG--YVH--VPGAKDPQ---------LDICP---QYVFNDLVHPTQEVHHCFAIMLES 399 (408)
T ss_pred HhcCCCcccc-ccCCC--ccC--CccccCcc---------cCCCC---ceEecCCCCChHHHHHHHHHHHHH
Confidence 9999999876 99876 432 23557654 45784 999999999999999999998753
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1.7e-51 Score=384.78 Aligned_cols=259 Identities=26% Similarity=0.384 Sum_probs=208.2
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecccc
Q 018055 39 AIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAST 118 (361)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~ 118 (361)
++|||||||||+||.........+|.+.. .|+||||||++|+|+||+.+|++. ...|+|||+|||+
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~~~~~~~~~---~~~grfsnG~~w~d~la~~lg~~~-----------~~~~~N~A~~Ga~ 66 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGGSNPPPSPP---YFGGRFSNGPVWVEYLAATLGLSG-----------LKQGYNYAVGGAT 66 (270)
T ss_pred CeEEeeCccccCCcchhhcCCCCCCCCCC---CCCCccCCchhHHHHHHHHhCCCc-----------cCCcceeEecccc
Confidence 58999999999999754322112333332 358999999999999999999853 1457999999999
Q ss_pred ccCCCCcccccCccCccHHHHHHHHHHHHHH-H-h-----hhc-CCCCCC-C-CccChhhhHHHHHHHHHHHHHHHHHcC
Q 018055 119 VLLPNTSLFVTGISPFSLAIQLNQMKEFKAR-V-D-----EFH-SSCTSA-I-GIGGVKQFLPQVVSQIAGTVEELYALG 188 (361)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-~-~-----~~~-gnD~~~-~-~~~~~~~~i~~~v~~i~~~v~~L~~~G 188 (361)
+........ .....+|..||++|+++... . . -++ +||+.. . ........++.+++++.++|++|+++|
T Consensus 67 ~~~~~~~~~--~~~~~~l~~Qv~~f~~~~~~~~~~~~l~~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~g 144 (270)
T cd01846 67 AGAYNVPPY--PPTLPGLSDQVAAFLAAHKLRLPPDTLVAIWIGANDLLNALDLPQNPDTLVTRAVDNLFQALQRLYAAG 144 (270)
T ss_pred cCCcccCCC--CCCCCCHHHHHHHHHHhccCCCCCCcEEEEEeccchhhhhccccccccccHHHHHHHHHHHHHHHHHCC
Confidence 987543211 01356999999999987651 1 0 123 378721 1 122345688899999999999999999
Q ss_pred CcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhC
Q 018055 189 GRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQN 268 (361)
Q Consensus 189 Ar~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~n 268 (361)
+|+|+|+++||++|+|.++..... . .+.++.+++.||++|++++++|++++|+++|+++|+|+++.++++|
T Consensus 145 ~~~i~v~~~p~~~~~P~~~~~~~~-------~--~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~ 215 (270)
T cd01846 145 ARNFLVLNLPDLGLTPAFQAQGDA-------V--AARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDN 215 (270)
T ss_pred CCEEEEeCCCCCCCCcccccCCcc-------c--HHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhC
Confidence 999999999999999998765321 0 2689999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 018055 269 PTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 269 P~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 341 (361)
|++|||++++.+||+.+ . |... ...|.+|++|+|||++|||+++|++||+.+++
T Consensus 216 p~~yGf~~~~~~C~~~~--~--------~~~~---------~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 216 PAAYGFTNVTDPCLDYV--Y--------SYSP---------REACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred HHhcCCCcCcchhcCCC--c--------cccc---------cCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 99999999999999853 1 5443 57899999999999999999999999999875
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=2.7e-39 Score=302.91 Aligned_cols=278 Identities=25% Similarity=0.325 Sum_probs=199.5
Q ss_pred CCCCCccEEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCC--CcchHHHHHHhcCC-CCCCCcc----CcCCC
Q 018055 32 DSKCEFEAIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASD--GRLIVDFLAQALGL-PFLSPYL----QSIGS 104 (361)
Q Consensus 32 ~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSn--G~vw~d~la~~lg~-~~~p~yl----~~~~~ 104 (361)
.+.++|++++||||||||+|+........-.| ..|..++..++.+ |..|+++.++.+|. ...+-++ ++.+.
T Consensus 24 ~~~~~~~~l~vfGDSlSDsg~~~~~a~~~~~~--~~~~~~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~~~~~~ 101 (370)
T COG3240 24 PSLAPFQRLVVFGDSLSDSGNYYRPAGHHGDP--GSYGTIPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAADPNGL 101 (370)
T ss_pred ccccccceEEEeccchhhcccccCcccccCCc--cccccccCCcccCCCceeeeccchhhhccccccccccccccCcccc
Confidence 36788999999999999999986443222112 1222233445555 57789999998881 1111111 12222
Q ss_pred C--CCccceeeeccccccCCC--CcccccCccCccHHHHHHHHHHHHHHHh---------------h--hc-CCCCCCCC
Q 018055 105 D--YRHGANYATLASTVLLPN--TSLFVTGISPFSLAIQLNQMKEFKARVD---------------E--FH-SSCTSAIG 162 (361)
Q Consensus 105 ~--~~~G~NfA~gGA~~~~~~--~~~~~~~~~~~~l~~Qv~~f~~~~~~~~---------------~--~~-gnD~~~~~ 162 (361)
. ...|.|||+|||++...+ ..+ +....++.+|+.+|+....... . |. +|||....
T Consensus 102 ~~~~a~gnd~A~gga~~~~~~~~~~i---~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~~~ggand~~~~~ 178 (370)
T COG3240 102 YIHWAGGNDLAVGGARSTEPNTGNSI---GASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYFLWGGANDYLALP 178 (370)
T ss_pred cCcccccccHhhhccccccccccccc---cccccchHHHHHHHHHhcCCccccccccccccCHHHHHHHhhcchhhhccc
Confidence 2 368899999999999766 222 2356799999999998664310 1 11 35662211
Q ss_pred ccC---hhhhHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHH
Q 018055 163 IGG---VKQFLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKE 239 (361)
Q Consensus 163 ~~~---~~~~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~ 239 (361)
... .+.+......++.+.|++|.++|||+|+|+++||++.+|....... -.+.+.+++..||..|.+
T Consensus 179 ~~~a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~~----------~~~~a~~~t~~~Na~L~~ 248 (370)
T COG3240 179 MLKAAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYGT----------EAIQASQATIAFNASLTS 248 (370)
T ss_pred ccchhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeeccccccccccccccc----------hHHHHHHHHHHHHHHHHH
Confidence 111 1223334456799999999999999999999999999999775432 133788999999999999
Q ss_pred HHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCc
Q 018055 240 ALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDY 319 (361)
Q Consensus 240 ~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~y 319 (361)
.|++++ .+|+++|++.++++|+.||++|||+|++.+||... .- ...|.... ...|..|++|
T Consensus 249 ~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant~~~~c~~~--~~----~~~~~a~~--------p~~~~~~~~y 309 (370)
T COG3240 249 QLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANTTAPACDAT--VS----NPACSASL--------PALCAAPQKY 309 (370)
T ss_pred HHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccCCCcccCcc--cC----Cccccccc--------ccccCCccce
Confidence 999984 79999999999999999999999999999999753 11 12565541 2345567789
Q ss_pred eecCCCChhHHHHHHHHHHHHcCC
Q 018055 320 VSWDGIHATEAANKLTTWAILNGS 343 (361)
Q Consensus 320 lfwD~~HPT~~~h~~iA~~~~~~~ 343 (361)
+|||++|||+++|++||++|++..
T Consensus 310 lFaD~vHPTt~~H~liAeyila~l 333 (370)
T COG3240 310 LFADSVHPTTAVHHLIAEYILARL 333 (370)
T ss_pred eeecccCCchHHHHHHHHHHHHHH
Confidence 999999999999999999998765
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.89 E-value=2e-23 Score=188.87 Aligned_cols=219 Identities=27% Similarity=0.390 Sum_probs=150.8
Q ss_pred EEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeeccccc
Q 018055 40 IFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLASTV 119 (361)
Q Consensus 40 l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~~ 119 (361)
|++||||+||. +|+++|.+|.+.++..+.-... ... ...-..+.|+|++|+++
T Consensus 1 i~~fGDS~td~-----------------------~~~~~~~~~~~~~~~~l~~~~~---~~~-~~~~~~~~n~a~~G~~~ 53 (234)
T PF00657_consen 1 IVVFGDSLTDG-----------------------GGDSNGGGWPEGLANNLSSCLG---ANQ-RNSGVDVSNYAISGATS 53 (234)
T ss_dssp EEEEESHHHHT-----------------------TTSSTTCTHHHHHHHHCHHCCH---HHH-HCTTEEEEEEE-TT--C
T ss_pred CEEEeehhccc-----------------------CCCCCCcchhhhHHHHHhhccc---ccc-CCCCCCeeccccCCCcc
Confidence 68999999998 3667899999999998732110 000 00113457999999998
Q ss_pred cCCCCcccccCccCccHHHHHHHHHHHHHHHh-----hhcC-CCCCC-CCccChhhhHHHHHHHHHHHHHHHHHcCCc--
Q 018055 120 LLPNTSLFVTGISPFSLAIQLNQMKEFKARVD-----EFHS-SCTSA-IGIGGVKQFLPQVVSQIAGTVEELYALGGR-- 190 (361)
Q Consensus 120 ~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~-----~~~g-nD~~~-~~~~~~~~~i~~~v~~i~~~v~~L~~~GAr-- 190 (361)
........ .....+..|+........... -+.| ||+.. .........++.+++.+.+.|++|++.|+|
T Consensus 54 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lv~i~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~ 130 (234)
T PF00657_consen 54 DGDLYNLW---AQVQNISQQISRLLDSKSFYDPDLVVIWIGTNDYFNNRDSSDNNTSVEEFVENLRNAIKRLRSNGARLI 130 (234)
T ss_dssp C-HGGCCC---CTCHHHHHHHHHHHHHHHHHTTSEEEEE-SHHHHSSCCSCSTTHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred ccccchhh---HHHHHHHHHhhccccccccCCcceEEEecccCcchhhcccchhhhhHhhHhhhhhhhhhHHhccCCccc
Confidence 64321110 011123344443332222111 1224 67521 122334567889999999999999999999
Q ss_pred ---EEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCC-CceEEEeccchHHHHH-
Q 018055 191 ---TFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLP-NASLICVDTHSVLLEL- 265 (361)
Q Consensus 191 ---~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p-~~~i~~~D~~~~~~~i- 265 (361)
+++++++||+++.|....... ....|.+.+++.+..||.+|++.+++++++++ +.++.++|+++.+.++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~ 204 (234)
T PF00657_consen 131 IVANIVVINLPPIGCLPAWSSNNK------DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMY 204 (234)
T ss_dssp EEEEEEEEHHC-GGGSTTHHHTHT------TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHH
T ss_pred cccccccccccccccccccccccc------cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhh
Confidence 999999999998888665432 23578999999999999999999999988876 8899999999999988
Q ss_pred -HhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHH
Q 018055 266 -FQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAI 339 (361)
Q Consensus 266 -i~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~ 339 (361)
..+|+. ++|+|||.+|||+++|++||++|
T Consensus 205 ~~~~~~~---------------------------------------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 205 GIQNPEN---------------------------------------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp HHHHGGH---------------------------------------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred hccCccc---------------------------------------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 555532 35799999999999999999986
No 8
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.95 E-value=9.3e-09 Score=90.12 Aligned_cols=181 Identities=18% Similarity=0.080 Sum_probs=104.6
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecccc
Q 018055 39 AIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAST 118 (361)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~ 118 (361)
+|++||||++. |... .+....+..|+++|++.+..+. +. ..-.|.+++|++
T Consensus 1 ~i~~~GDSit~-G~~~------------------~~~~~~~~~~~~~l~~~l~~~~-~~---------~~~~N~g~~G~~ 51 (185)
T cd01832 1 RYVALGDSITE-GVGD------------------PVPDGGYRGWADRLAAALAAAD-PG---------IEYANLAVRGRR 51 (185)
T ss_pred CeeEecchhhc-ccCC------------------CCCCCccccHHHHHHHHhcccC-CC---------ceEeeccCCcch
Confidence 47899999986 3211 1122246789999999985421 00 122699999987
Q ss_pred ccCCCCcccccCccCccHHHHHHHHHHHHHHHh--hhcCCCCCCCCccChhhhHHHHHHHHHHHHHHHHHcCCcEEEEcc
Q 018055 119 VLLPNTSLFVTGISPFSLAIQLNQMKEFKARVD--EFHSSCTSAIGIGGVKQFLPQVVSQIAGTVEELYALGGRTFLVLN 196 (361)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~--~~~gnD~~~~~~~~~~~~i~~~v~~i~~~v~~L~~~GAr~~lv~n 196 (361)
+.. .+..|++.-+....++. ....||.... ....++..+++...|+++...+++ +++++
T Consensus 52 ~~~-------------~~~~~~~~~~~~~~d~vii~~G~ND~~~~-----~~~~~~~~~~~~~~i~~i~~~~~~-vil~~ 112 (185)
T cd01832 52 TAQ-------------ILAEQLPAALALRPDLVTLLAGGNDILRP-----GTDPDTYRADLEEAVRRLRAAGAR-VVVFT 112 (185)
T ss_pred HHH-------------HHHHHHHHHHhcCCCEEEEeccccccccC-----CCCHHHHHHHHHHHHHHHHhCCCE-EEEec
Confidence 652 12233332221111111 1112554210 123445666777777777767765 77788
Q ss_pred cCCC-CccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCC
Q 018055 197 LAPI-GCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLK 275 (361)
Q Consensus 197 lppl-g~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~ 275 (361)
+||. +..|. ....+.....+|+.|++..++. ++.++|++..+.
T Consensus 113 ~~~~~~~~~~-----------------~~~~~~~~~~~n~~l~~~a~~~-------~v~~vd~~~~~~------------ 156 (185)
T cd01832 113 IPDPAVLEPF-----------------RRRVRARLAAYNAVIRAVAARY-------GAVHVDLWEHPE------------ 156 (185)
T ss_pred CCCccccchh-----------------HHHHHHHHHHHHHHHHHHHHHc-------CCEEEecccCcc------------
Confidence 8887 22221 1123445778888887776542 588889875431
Q ss_pred CCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 018055 276 YGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 276 n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 341 (361)
+ .. .+++.-|++||++++|+++|+.+++
T Consensus 157 -----~-~~--------------------------------~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 157 -----F-AD--------------------------------PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred -----c-CC--------------------------------ccccccCCCCCChhHHHHHHHHHhh
Confidence 0 00 0112349999999999999999875
No 9
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.83 E-value=2.8e-08 Score=87.67 Aligned_cols=181 Identities=18% Similarity=0.199 Sum_probs=103.1
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecccc
Q 018055 39 AIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAST 118 (361)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~ 118 (361)
+++++|||++ .|-- . -..+.-|++.+++.+.......+ .-.|++++|++
T Consensus 4 ~i~~~GDSit-~G~g------------~---------~~~~~~~~~~l~~~l~~~~~~~~---------~~~n~g~~G~t 52 (191)
T cd01836 4 RLLVLGDSTA-AGVG------------V---------ETQDQALAGQLARGLAAITGRGV---------RWRLFAKTGAT 52 (191)
T ss_pred EEEEEecccc-cccc------------c---------cchhccHHHHHHHHHHHhhCCce---------EEEEEecCCcC
Confidence 6889999998 3321 0 01123567777777654221111 12699999987
Q ss_pred ccCCCCcccccCccCccHHHHHHHHHHHHHHHh--hhcCCCCCCCCccChhhhHHHHHHHHHHHHHHHHH-cCCcEEEEc
Q 018055 119 VLLPNTSLFVTGISPFSLAIQLNQMKEFKARVD--EFHSSCTSAIGIGGVKQFLPQVVSQIAGTVEELYA-LGGRTFLVL 195 (361)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~--~~~gnD~~~~~~~~~~~~i~~~v~~i~~~v~~L~~-~GAr~~lv~ 195 (361)
+. .+..+++.......++. ...+||.... ...++..+++.+.++++.+ ....+|++.
T Consensus 53 ~~--------------~~~~~l~~~~~~~pd~Vii~~G~ND~~~~------~~~~~~~~~l~~li~~i~~~~~~~~iiv~ 112 (191)
T cd01836 53 SA--------------DLLRQLAPLPETRFDVAVISIGVNDVTHL------TSIARWRKQLAELVDALRAKFPGARVVVT 112 (191)
T ss_pred HH--------------HHHHHHHhcccCCCCEEEEEecccCcCCC------CCHHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 53 23344444111111111 1123666211 1234556677777777766 345689999
Q ss_pred ccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCC
Q 018055 196 NLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLK 275 (361)
Q Consensus 196 nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~ 275 (361)
++||++..|.... .....+++....+|+.+++..++ + ..+.++|++..+.
T Consensus 113 ~~p~~~~~~~~~~------------~~~~~~~~~~~~~n~~~~~~a~~----~--~~~~~id~~~~~~------------ 162 (191)
T cd01836 113 AVPPLGRFPALPQ------------PLRWLLGRRARLLNRALERLASE----A--PRVTLLPATGPLF------------ 162 (191)
T ss_pred CCCCcccCCCCcH------------HHHHHHHHHHHHHHHHHHHHHhc----C--CCeEEEecCCccc------------
Confidence 9999887653211 01223455667777777666543 2 2567778765431
Q ss_pred CCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 018055 276 YGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 276 n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 341 (361)
..++.-|++||++++|+++|+.+.+
T Consensus 163 -----------------------------------------~~~~~~DglHpn~~Gy~~~a~~l~~ 187 (191)
T cd01836 163 -----------------------------------------PALFASDGFHPSAAGYAVWAEALAP 187 (191)
T ss_pred -----------------------------------------hhhccCCCCCCChHHHHHHHHHHHH
Confidence 0113358899999999999999874
No 10
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.82 E-value=2.6e-08 Score=92.29 Aligned_cols=233 Identities=15% Similarity=0.081 Sum_probs=117.4
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecccc
Q 018055 39 AIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAST 118 (361)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~ 118 (361)
++++||||++---.. +++... ......|. ...|++++++.|+... ..-.|+|.+|++
T Consensus 2 ~~v~iGDS~~~G~g~--------~~~~~~-~~~~c~rs--~~~y~~~la~~l~~~~------------~~~~n~a~sGa~ 58 (259)
T cd01823 2 RYVALGDSYAAGPGA--------GPLDDG-PDDGCRRS--SNSYPTLLARALGDET------------LSFTDVACSGAT 58 (259)
T ss_pred CEEEecchhhcCCCC--------CcccCC-CCCCCccC--CccHHHHHHHHcCCCC------------ceeeeeeecCcc
Confidence 578999998832221 111100 01112333 4679999999998531 112699999999
Q ss_pred ccCCCCcccccCccCccHHHHHHHHHHHHHHHh--hhcCCCCCCCC---------------------ccChhhhHHHHHH
Q 018055 119 VLLPNTSLFVTGISPFSLAIQLNQMKEFKARVD--EFHSSCTSAIG---------------------IGGVKQFLPQVVS 175 (361)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~--~~~gnD~~~~~---------------------~~~~~~~i~~~v~ 175 (361)
+....... . .....|.+..... .++. ...+||..... ........+...+
T Consensus 59 ~~~~~~~~-----~-~~~~~~~~~l~~~-~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (259)
T cd01823 59 TTDGIEPQ-----Q-GGIAPQAGALDPD-TDLVTITIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGA 131 (259)
T ss_pred cccccccc-----c-CCCchhhcccCCC-CCEEEEEECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHH
Confidence 98543210 0 1112222211100 1111 12358861100 0011233455666
Q ss_pred HHHHHHHHHHHc-CCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEE
Q 018055 176 QIAGTVEELYAL-GGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLI 254 (361)
Q Consensus 176 ~i~~~v~~L~~~-GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~ 254 (361)
++...|++|.+. .--+|++++.|++-..-.............-.......+++....+|+.+++..++. ...++.
T Consensus 132 ~l~~~l~~i~~~~p~a~I~~~gyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~i~~~a~~~----~~~~v~ 207 (259)
T cd01823 132 RLKAVLDRIRERAPNARVVVVGYPRLFPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLNALIRRAAADA----GDYKVR 207 (259)
T ss_pred HHHHHHHHHHhhCCCcEEEEecccccccCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh----CCceEE
Confidence 777777777764 334688999887632100000000000000001123456777778888777766553 235699
Q ss_pred EeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHH
Q 018055 255 CVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKL 334 (361)
Q Consensus 255 ~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~ 334 (361)
++|++..+.. ...|... .. +.. .. +....+.-|.+||++++|+.
T Consensus 208 fvD~~~~f~~-------------~~~~~~~---~~-------~~~----------~~---~~~~~~~~d~~HPn~~G~~~ 251 (259)
T cd01823 208 FVDTDAPFAG-------------HRACSPD---PW-------SRS----------VL---DLLPTRQGKPFHPNAAGHRA 251 (259)
T ss_pred EEECCCCcCC-------------CccccCC---Cc-------ccc----------cc---CCCCCCCccCCCCCHHHHHH
Confidence 9999865432 1223211 00 000 00 11223457999999999999
Q ss_pred HHHHHHc
Q 018055 335 TTWAILN 341 (361)
Q Consensus 335 iA~~~~~ 341 (361)
||+.+.+
T Consensus 252 ~A~~i~~ 258 (259)
T cd01823 252 IADLIVD 258 (259)
T ss_pred HHHHHhh
Confidence 9999875
No 11
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.80 E-value=1.1e-07 Score=85.28 Aligned_cols=192 Identities=17% Similarity=0.120 Sum_probs=104.5
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecccc
Q 018055 39 AIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAST 118 (361)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~ 118 (361)
+|+.||||++. |-. +-+ .+|++.+..|+..|++.|+... +. ..-+|.+++|.+
T Consensus 1 ~I~~~GDSiT~-G~~---------~~~-------~~~~~~~~~w~~~L~~~l~~~~-~~---------~~viN~Gv~G~t 53 (208)
T cd01839 1 TILCFGDSNTW-GII---------PDT-------GGRYPFEDRWPGVLEKALGANG-EN---------VRVIEDGLPGRT 53 (208)
T ss_pred CEEEEecCccc-CCC---------CCC-------CCcCCcCCCCHHHHHHHHccCC-CC---------eEEEecCcCCcc
Confidence 47889999983 221 000 2356677899999999986542 11 122799999988
Q ss_pred ccCCCCcccccCccCccHHHHHHHHHHH--HHHHh-hhcC-CCCCC-CCccChhhhHHHHHHHHHHHHHHHHHc------
Q 018055 119 VLLPNTSLFVTGISPFSLAIQLNQMKEF--KARVD-EFHS-SCTSA-IGIGGVKQFLPQVVSQIAGTVEELYAL------ 187 (361)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~Qv~~f~~~--~~~~~-~~~g-nD~~~-~~~~~~~~~i~~~v~~i~~~v~~L~~~------ 187 (361)
+...... + ........++..... ...+. -..| ||... ... -.+...+++.+.|+++.+.
T Consensus 54 t~~~~~~-~----~~~~~l~~l~~~l~~~~~pd~vii~lGtND~~~~~~~-----~~~~~~~~l~~lv~~i~~~~~~~~~ 123 (208)
T cd01839 54 TVLDDPF-F----PGRNGLTYLPQALESHSPLDLVIIMLGTNDLKSYFNL-----SAAEIAQGLGALVDIIRTAPIEPGM 123 (208)
T ss_pred eeccCcc-c----cCcchHHHHHHHHHhCCCCCEEEEeccccccccccCC-----CHHHHHHHHHHHHHHHHhccccccC
Confidence 7632110 0 001111223322211 00110 1124 66521 110 1233444555555555554
Q ss_pred CCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHh
Q 018055 188 GGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQ 267 (361)
Q Consensus 188 GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~ 267 (361)
+..++++++.||+...+... ..+....+.....||+.+++..++. ++.++|.+.++.
T Consensus 124 ~~~~iil~~pp~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~~---- 180 (208)
T cd01839 124 PAPKILIVAPPPIRTPKGSL------------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVGS---- 180 (208)
T ss_pred CCCCEEEEeCCccCccccch------------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHhc----
Confidence 46678888888872211100 0112234566778888887766543 467778654320
Q ss_pred CCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 018055 268 NPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 268 nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 341 (361)
. ...|++|||+.+|++||+.+++
T Consensus 181 ------------------------------------------~---------~~~DGvH~~~~G~~~~a~~l~~ 203 (208)
T cd01839 181 ------------------------------------------T---------SPVDGVHLDADQHAALGQALAS 203 (208)
T ss_pred ------------------------------------------c---------CCCCccCcCHHHHHHHHHHHHH
Confidence 0 1268999999999999999874
No 12
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.69 E-value=4.4e-07 Score=79.30 Aligned_cols=172 Identities=18% Similarity=0.104 Sum_probs=95.7
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecccc
Q 018055 39 AIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAST 118 (361)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~ 118 (361)
++++||||++.-.. .-+-+..|+..+++.+++.. .|.+++|++
T Consensus 1 ~iv~~GDSit~G~g----------------------~~~~~~~~~~~~~~~~~~~v---------------~N~g~~G~~ 43 (177)
T cd01844 1 PWVFYGTSISQGAC----------------------ASRPGMAWTAILARRLGLEV---------------INLGFSGNA 43 (177)
T ss_pred CEEEEeCchhcCcC----------------------CCCCCCcHHHHHHHHhCCCe---------------EEeeecccc
Confidence 47899999984321 11224589999999887643 699999975
Q ss_pred ccCCCCcccccCccCccHHHHHHHHHHHHHHHhh-hcC-CCCCCCCccChhhhHHHHHHHHHHHHHHHHHcCC-cEEEEc
Q 018055 119 VLLPNTSLFVTGISPFSLAIQLNQMKEFKARVDE-FHS-SCTSAIGIGGVKQFLPQVVSQIAGTVEELYALGG-RTFLVL 195 (361)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~-~~g-nD~~~~~~~~~~~~i~~~v~~i~~~v~~L~~~GA-r~~lv~ 195 (361)
... . .+..++.. ...++.- ..| ||.. ... +..+++.+.+++|.+... .+|+++
T Consensus 44 ~~~-----------~-~~~~~~~~---~~pd~vii~~G~ND~~--------~~~-~~~~~~~~~i~~i~~~~p~~~iil~ 99 (177)
T cd01844 44 RLE-----------P-EVAELLRD---VPADLYIIDCGPNIVG--------AEA-MVRERLGPLVKGLRETHPDTPILLV 99 (177)
T ss_pred cch-----------H-HHHHHHHh---cCCCEEEEEeccCCCc--------cHH-HHHHHHHHHHHHHHHHCcCCCEEEE
Confidence 421 0 11111111 1111110 112 4431 111 567788888888888764 467777
Q ss_pred ccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCC
Q 018055 196 NLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLK 275 (361)
Q Consensus 196 nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~ 275 (361)
+.||. |...... ......++....+|. .+++++++ .+.++.++|.++++..
T Consensus 100 ~~~~~---~~~~~~~----------~~~~~~~~~~~~~~~----~~~~~~~~-~~~~v~~id~~~~~~~----------- 150 (177)
T cd01844 100 SPRYC---PDAELTP----------GRGKLTLAVRRALRE----AFEKLRAD-GVPNLYYLDGEELLGP----------- 150 (177)
T ss_pred ecCCC---CccccCc----------chhHHHHHHHHHHHH----HHHHHHhc-CCCCEEEecchhhcCC-----------
Confidence 76664 2211100 012233334444444 44444433 2346888887544210
Q ss_pred CCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 018055 276 YGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 276 n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 341 (361)
. .-++.|++|||+++|+++|+.+..
T Consensus 151 ----------------------------------~-------~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 151 ----------------------------------D-------GEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred ----------------------------------C-------CCCCCCCCCCCHHHHHHHHHHHhh
Confidence 0 013469999999999999999874
No 13
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.69 E-value=1.6e-07 Score=83.95 Aligned_cols=33 Identities=9% Similarity=0.105 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCc
Q 018055 169 FLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGC 202 (361)
Q Consensus 169 ~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~ 202 (361)
.++...+++...++++.+.|+ +++++++||..-
T Consensus 100 ~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~~ 132 (204)
T cd01830 100 TAEELIAGYRQLIRRAHARGI-KVIGATITPFEG 132 (204)
T ss_pred CHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCCC
Confidence 455677788888888888887 477788887643
No 14
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.68 E-value=6.1e-07 Score=78.54 Aligned_cols=104 Identities=20% Similarity=0.186 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCC
Q 018055 170 LPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLP 249 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p 249 (361)
.++..+++.+.|+.+.+.|++ ++++..+|....+... +....+.....||+.+++..++
T Consensus 78 ~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~--------------~~~~~~~~~~~~n~~~~~~a~~------ 136 (183)
T cd04501 78 LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP--------------QWLRPANKLKSLNRWLKDYARE------ 136 (183)
T ss_pred HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch--------------hhcchHHHHHHHHHHHHHHHHH------
Confidence 344566677777777778876 5555666655433211 0112345677888877766654
Q ss_pred CceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhH
Q 018055 250 NASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATE 329 (361)
Q Consensus 250 ~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~ 329 (361)
..+.++|.+..+.+.-. . ....++..|++||++
T Consensus 137 -~~v~~vd~~~~~~~~~~----------------~------------------------------~~~~~~~~DgvHp~~ 169 (183)
T cd04501 137 -NGLLFLDFYSPLLDERN----------------V------------------------------GLKPGLLTDGLHPSR 169 (183)
T ss_pred -cCCCEEechhhhhcccc----------------c------------------------------cccccccCCCCCCCH
Confidence 25889999987554210 0 001234579999999
Q ss_pred HHHHHHHHHHHc
Q 018055 330 AANKLTTWAILN 341 (361)
Q Consensus 330 ~~h~~iA~~~~~ 341 (361)
++|+++|+.+.+
T Consensus 170 ~Gy~~~a~~i~~ 181 (183)
T cd04501 170 EGYRVMAPLAEK 181 (183)
T ss_pred HHHHHHHHHHHH
Confidence 999999999875
No 15
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.59 E-value=5.1e-07 Score=79.58 Aligned_cols=109 Identities=13% Similarity=0.062 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHHHHH--cCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhc
Q 018055 170 LPQVVSQIAGTVEELYA--LGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRN 247 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~--~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~ 247 (361)
.+...+++.+.|+++.+ .|+ ++++++.||+........... ........++....||+.+++..++.
T Consensus 87 ~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~~--- 155 (199)
T cd01838 87 LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED-------GGSQPGRTNELLKQYAEACVEVAEEL--- 155 (199)
T ss_pred HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc-------ccCCccccHHHHHHHHHHHHHHHHHh---
Confidence 34455556666666665 454 577778887654321110000 00012344667788888877665542
Q ss_pred CCCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCCh
Q 018055 248 LPNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHA 327 (361)
Q Consensus 248 ~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HP 327 (361)
.+.++|+++.+... +. ....++.|++||
T Consensus 156 ----~~~~iD~~~~~~~~---~~---------------------------------------------~~~~~~~Dg~Hp 183 (199)
T cd01838 156 ----GVPVIDLWTAMQEE---AG---------------------------------------------WLESLLTDGLHF 183 (199)
T ss_pred ----CCcEEEHHHHHHhc---cC---------------------------------------------chhhhcCCCCCc
Confidence 47888998776531 10 001245699999
Q ss_pred hHHHHHHHHHHHHc
Q 018055 328 TEAANKLTTWAILN 341 (361)
Q Consensus 328 T~~~h~~iA~~~~~ 341 (361)
++++|+++|+.+.+
T Consensus 184 n~~G~~~~a~~l~~ 197 (199)
T cd01838 184 SSKGYELLFEEIVK 197 (199)
T ss_pred CHhHHHHHHHHHHh
Confidence 99999999999874
No 16
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.57 E-value=2.5e-07 Score=81.12 Aligned_cols=107 Identities=7% Similarity=-0.077 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHHHc-CCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELYAL-GGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~-GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.+...+++...|+++.+. ...+|++++.||....+... ....+.....+|+.+++..++ +
T Consensus 76 ~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~a~~----~ 136 (189)
T cd01825 76 ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGAG---------------RWRTPPGLDAVIAAQRRVAKE----E 136 (189)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCCC---------------CcccCCcHHHHHHHHHHHHHH----c
Confidence 345567777777777774 45568888877653322100 001122355666666655543 2
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
.+.++|+++.+.+. | +. .......++..|++||+
T Consensus 137 ---~v~~vd~~~~~~~~---------------~-~~---------------------------~~~~~~~~~~~Dg~Hp~ 170 (189)
T cd01825 137 ---GIAFWDLYAAMGGE---------------G-GI---------------------------WQWAEPGLARKDYVHLT 170 (189)
T ss_pred ---CCeEEeHHHHhCCc---------------c-hh---------------------------hHhhcccccCCCcccCC
Confidence 38889999775221 1 00 00011234567999999
Q ss_pred HHHHHHHHHHHHc
Q 018055 329 EAANKLTTWAILN 341 (361)
Q Consensus 329 ~~~h~~iA~~~~~ 341 (361)
+++|+.||+.+.+
T Consensus 171 ~~G~~~~a~~i~~ 183 (189)
T cd01825 171 PRGYERLANLLYE 183 (189)
T ss_pred cchHHHHHHHHHH
Confidence 9999999999875
No 17
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.56 E-value=9.3e-07 Score=78.42 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=20.5
Q ss_pred ceecCCCChhHHHHHHHHHHHHcC
Q 018055 319 YVSWDGIHATEAANKLTTWAILNG 342 (361)
Q Consensus 319 ylfwD~~HPT~~~h~~iA~~~~~~ 342 (361)
++..|++||++++|+.+|+.+.+.
T Consensus 159 ~~~~DGiHpn~~Gy~~~A~~i~~~ 182 (191)
T PRK10528 159 WMQDDGIHPNRDAQPFIADWMAKQ 182 (191)
T ss_pred hcCCCCCCCCHHHHHHHHHHHHHH
Confidence 355799999999999999998754
No 18
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.54 E-value=1.7e-06 Score=75.97 Aligned_cols=182 Identities=15% Similarity=0.156 Sum_probs=97.7
Q ss_pred EEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeecccc
Q 018055 39 AIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAST 118 (361)
Q Consensus 39 ~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA~ 118 (361)
+|+++|||++.-... + ...-|++.|++.++.+. .-.|+|++|++
T Consensus 2 ~i~~~GDSit~G~~~--------------------~---~~~~~~~~l~~~l~~~~-------------~v~N~g~~G~t 45 (188)
T cd01827 2 KVACVGNSITEGAGL--------------------R---AYDSYPSPLAQMLGDGY-------------EVGNFGKSART 45 (188)
T ss_pred eEEEEecccccccCC--------------------C---CCCchHHHHHHHhCCCC-------------eEEeccCCcce
Confidence 588999999852211 0 23458889999886432 12699999998
Q ss_pred ccCCCCcccccCccCccHHHHHHHHHHHHHHHh--hhcCCCCCCCCccChhhhHHHHHHHHHHHHHHHHHcCC-cEEEEc
Q 018055 119 VLLPNTSLFVTGISPFSLAIQLNQMKEFKARVD--EFHSSCTSAIGIGGVKQFLPQVVSQIAGTVEELYALGG-RTFLVL 195 (361)
Q Consensus 119 ~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~--~~~gnD~~~~~~~~~~~~i~~~v~~i~~~v~~L~~~GA-r~~lv~ 195 (361)
+..... .+.....|++..+.....+. ....||...... ...+....++.+.|+++.+.+. .+++++
T Consensus 46 ~~~~~~-------~~~~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~----~~~~~~~~~l~~li~~i~~~~~~~~iil~ 114 (188)
T cd01827 46 VLNKGD-------HPYMNEERYKNALAFNPNIVIIKLGTNDAKPQNW----KYKDDFKKDYETMIDSFQALPSKPKIYIC 114 (188)
T ss_pred eecCCC-------cCccchHHHHHhhccCCCEEEEEcccCCCCCCCC----ccHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 764211 11112333332222111111 112366521110 1123445566777777766654 477787
Q ss_pred ccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCC
Q 018055 196 NLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLK 275 (361)
Q Consensus 196 nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~ 275 (361)
+.||....... . ..-+.....+|+.+++..++ -.+.++|.+..+.. +
T Consensus 115 t~~p~~~~~~~---------------~-~~~~~~~~~~~~~~~~~a~~-------~~~~~vD~~~~~~~---~------- 161 (188)
T cd01827 115 YPIPAYYGDGG---------------F-INDNIIKKEIQPMIDKIAKK-------LNLKLIDLHTPLKG---K------- 161 (188)
T ss_pred eCCcccccCCC---------------c-cchHHHHHHHHHHHHHHHHH-------cCCcEEEccccccC---C-------
Confidence 77765422110 0 01123345666666555443 24677888753210 0
Q ss_pred CCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHcC
Q 018055 276 YGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILNG 342 (361)
Q Consensus 276 n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~~ 342 (361)
. .+.-|++||++++|++||+.+.+.
T Consensus 162 -----------------------------------~-------~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 162 -----------------------------------P-------ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred -----------------------------------c-------cccCCCCCcCHHHHHHHHHHHHHH
Confidence 0 123588999999999999998753
No 19
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.54 E-value=1.2e-06 Score=77.84 Aligned_cols=108 Identities=12% Similarity=0.107 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCC
Q 018055 170 LPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLP 249 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p 249 (361)
++...+++.+.|+++.+.|++ +++++.||.... .. .. ..+.....||+.+++..++.
T Consensus 89 ~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~~---~~-----------~~---~~~~~~~~~~~~~~~~a~~~----- 145 (198)
T cd01821 89 YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRTF---DE-----------GG---KVEDTLGDYPAAMRELAAEE----- 145 (198)
T ss_pred HHHHHHHHHHHHHHHHHCCCe-EEEECCcccccc---CC-----------CC---cccccchhHHHHHHHHHHHh-----
Confidence 455677777888888888886 455555542111 00 00 12334567788877776653
Q ss_pred CceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhH
Q 018055 250 NASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATE 329 (361)
Q Consensus 250 ~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~ 329 (361)
.+.++|++..+.+..+.-..- .. . ... .++..|++||++
T Consensus 146 --~~~~vD~~~~~~~~~~~~g~~---~~-----------~--------------------~~~-----~~~~~DgvHp~~ 184 (198)
T cd01821 146 --GVPLIDLNAASRALYEAIGPE---KS-----------K--------------------KYF-----PEGPGDNTHFSE 184 (198)
T ss_pred --CCCEEecHHHHHHHHHHhChH---hH-----------H--------------------hhC-----cCCCCCCCCCCH
Confidence 478899999988765532100 00 0 000 235579999999
Q ss_pred HHHHHHHHHHHc
Q 018055 330 AANKLTTWAILN 341 (361)
Q Consensus 330 ~~h~~iA~~~~~ 341 (361)
.+|++||+.|++
T Consensus 185 ~G~~~~a~~i~~ 196 (198)
T cd01821 185 KGADVVARLVAE 196 (198)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 20
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.51 E-value=1.6e-06 Score=77.32 Aligned_cols=102 Identities=14% Similarity=0.171 Sum_probs=66.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCc-EEEEcccC-CCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHh
Q 018055 169 FLPQVVSQIAGTVEELYALGGR-TFLVLNLA-PIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRR 246 (361)
Q Consensus 169 ~i~~~v~~i~~~v~~L~~~GAr-~~lv~nlp-plg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~ 246 (361)
.++....++.+.|+++.+.+.+ +|++++++ |... .. . -...+++.+..||+.+++..++
T Consensus 100 ~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~-----~~-~----------~~~~~~~~~~~~n~~~~~~a~~--- 160 (204)
T cd04506 100 AEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYV-----YF-P----------NITEINDIVNDWNEASQKLASQ--- 160 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCcccc-----cc-c----------hHHHHHHHHHHHHHHHHHHHHh---
Confidence 3456677788888888876543 57777653 2211 00 0 0124577888999888776643
Q ss_pred cCCCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCC
Q 018055 247 NLPNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIH 326 (361)
Q Consensus 247 ~~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~H 326 (361)
..++.++|++..+..-- +..++..|++|
T Consensus 161 ---~~~v~~vd~~~~~~~~~-------------------------------------------------~~~~~~~Dg~H 188 (204)
T cd04506 161 ---YKNAYFVPIFDLFSDGQ-------------------------------------------------NKYLLTSDHFH 188 (204)
T ss_pred ---CCCeEEEehHHhhcCCc-------------------------------------------------ccccccccCcC
Confidence 22588999887653210 11124569999
Q ss_pred hhHHHHHHHHHHHHc
Q 018055 327 ATEAANKLTTWAILN 341 (361)
Q Consensus 327 PT~~~h~~iA~~~~~ 341 (361)
|++++|++||+.+++
T Consensus 189 pn~~G~~~~a~~l~~ 203 (204)
T cd04506 189 PNDKGYQLIADRVFK 203 (204)
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999999875
No 21
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.47 E-value=1.2e-05 Score=76.01 Aligned_cols=177 Identities=13% Similarity=0.127 Sum_probs=95.1
Q ss_pred ccceeeeccccccCCCCcccccCccCccHHHHHHHHHHHHHHH------hhh-------cCCCCCCCCccChhhhHHHHH
Q 018055 108 HGANYATLASTVLLPNTSLFVTGISPFSLAIQLNQMKEFKARV------DEF-------HSSCTSAIGIGGVKQFLPQVV 174 (361)
Q Consensus 108 ~G~NfA~gGA~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~------~~~-------~gnD~~~~~~~~~~~~i~~~v 174 (361)
...|+|+.||++. +|..|++...+..++- ..| .+||.-..-........+...
T Consensus 83 ~~~N~av~Ga~s~--------------dL~~qa~~lv~r~~~~~~i~~~~dwklVtI~IG~ND~c~~~~~~~~~~~~~~~ 148 (288)
T cd01824 83 SGFNVAEPGAKSE--------------DLPQQARLLVRRMKKDPRVDFKNDWKLITIFIGGNDLCSLCEDANPGSPQTFV 148 (288)
T ss_pred cceeecccCcchh--------------hHHHHHHHHHHHHhhccccccccCCcEEEEEecchhHhhhcccccCcCHHHHH
Confidence 4679999998765 5667776544332110 012 236651110001113356677
Q ss_pred HHHHHHHHHHHHcCCc-EEEEcccCCCCccccccccCCCCCCCCCcCch--h--------hHhhHHHHHHHHHHHHHHHH
Q 018055 175 SQIAGTVEELYALGGR-TFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGC--M--------ISYNNAVLDYNNMLKEALAQ 243 (361)
Q Consensus 175 ~~i~~~v~~L~~~GAr-~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c--~--------~~~~~~~~~~N~~L~~~l~~ 243 (361)
+++.+.++.|.+..-| .|+++.+|++..++.... .+..-...-...| . +.+.++.+.|++.+++.+++
T Consensus 149 ~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~-~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~eia~~ 227 (288)
T cd01824 149 KNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTK-KPLQCETLLAPECPCLLGPTENSYQDLKKFYKEYQNEVEEIVES 227 (288)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhcc-CCccccccCCCcCCCcCCCCcchHHHHHHHHHHHHHHHHHHHhc
Confidence 8888888888888755 577778888876555431 1100000001123 1 35566777777777666654
Q ss_pred HHhcCCCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecC
Q 018055 244 TRRNLPNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWD 323 (361)
Q Consensus 244 l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD 323 (361)
-+-+..+..+++. .++.+.+.... ....+ .+++-||
T Consensus 228 ~~~~~~~f~vv~q---Pf~~~~~~~~~----------------------------------------~~g~d-~~~~~~D 263 (288)
T cd01824 228 GEFDREDFAVVVQ---PFFEDTSLPPL----------------------------------------PDGPD-LSFFSPD 263 (288)
T ss_pred ccccccCccEEee---Cchhccccccc----------------------------------------cCCCc-chhcCCC
Confidence 2221223333331 12222111000 00001 2567899
Q ss_pred CCChhHHHHHHHHHHHHcCC
Q 018055 324 GIHATEAANKLTTWAILNGS 343 (361)
Q Consensus 324 ~~HPT~~~h~~iA~~~~~~~ 343 (361)
.+||++++|.++|+.+++..
T Consensus 264 ~~Hps~~G~~~ia~~lwn~m 283 (288)
T cd01824 264 CFHFSQRGHAIAANALWNNL 283 (288)
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999998754
No 22
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.34 E-value=6.1e-06 Score=70.51 Aligned_cols=74 Identities=16% Similarity=0.184 Sum_probs=49.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHh
Q 018055 167 KQFLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRR 246 (361)
Q Consensus 167 ~~~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~ 246 (361)
....+...+.+.+.|+++...+ +++++.+||....+.... ..........+|+.+++..++
T Consensus 81 ~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~a~~--- 141 (179)
T PF13472_consen 81 DTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDPK--------------QDYLNRRIDRYNQAIRELAKK--- 141 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTTH--------------TTCHHHHHHHHHHHHHHHHHH---
T ss_pred cccHHHHHHHHHHHHHhhcccC--cEEEecCCCccccccccc--------------chhhhhhHHHHHHHHHHHHHH---
Confidence 3456677888888888888888 888888887654432111 123455677788877766543
Q ss_pred cCCCceEEEeccchHHH
Q 018055 247 NLPNASLICVDTHSVLL 263 (361)
Q Consensus 247 ~~p~~~i~~~D~~~~~~ 263 (361)
+ .+.++|++..+.
T Consensus 142 -~---~~~~id~~~~~~ 154 (179)
T PF13472_consen 142 -Y---GVPFIDLFDAFD 154 (179)
T ss_dssp -C---TEEEEEHHHHHB
T ss_pred -c---CCEEEECHHHHc
Confidence 2 688999998843
No 23
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.31 E-value=4.8e-06 Score=75.04 Aligned_cols=100 Identities=19% Similarity=0.165 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHcC-CcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELYALG-GRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~G-Ar~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.+...+++.+.|++|.+.. ..+|++++++|....|. .+.+....+|+.+++.+.+
T Consensus 108 ~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~~-------------------~~~~~~~~~n~~l~~~~~~----- 163 (214)
T cd01820 108 AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNPN-------------------PLRERNAQVNRLLAVRYDG----- 163 (214)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCch-------------------hHHHHHHHHHHHHHHHhcC-----
Confidence 4455667777777777663 34688888877653211 2334456777777654422
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
...+.++|++..+.+- . + . ..+.++.|++||+
T Consensus 164 -~~~v~~vd~~~~~~~~---~---------------g--~---------------------------~~~~~~~DGlHpn 195 (214)
T cd01820 164 -LPNVTFLDIDKGFVQS---D---------------G--T---------------------------ISHHDMPDYLHLT 195 (214)
T ss_pred -CCCEEEEeCchhhccc---C---------------C--C---------------------------cCHhhcCCCCCCC
Confidence 2368889987664310 0 0 0 0112457999999
Q ss_pred HHHHHHHHHHHHc
Q 018055 329 EAANKLTTWAILN 341 (361)
Q Consensus 329 ~~~h~~iA~~~~~ 341 (361)
+++|+++|+.+.+
T Consensus 196 ~~Gy~~~a~~l~~ 208 (214)
T cd01820 196 AAGYRKWADALHP 208 (214)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999874
No 24
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.30 E-value=1.1e-05 Score=71.09 Aligned_cols=20 Identities=35% Similarity=0.649 Sum_probs=18.2
Q ss_pred cCCCChhHHHHHHHHHHHHc
Q 018055 322 WDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 322 wD~~HPT~~~h~~iA~~~~~ 341 (361)
.|++||++++|++||+.+..
T Consensus 172 ~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 172 TDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred cCCCCCCHHHHHHHHHHHhc
Confidence 59999999999999999864
No 25
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.23 E-value=2.2e-05 Score=67.93 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=20.0
Q ss_pred eecCCCChhHHHHHHHHHHHHcC
Q 018055 320 VSWDGIHATEAANKLTTWAILNG 342 (361)
Q Consensus 320 lfwD~~HPT~~~h~~iA~~~~~~ 342 (361)
+.-|++||++++|+++|+.+.+.
T Consensus 153 ~~~DgvHpn~~G~~~~a~~i~~~ 175 (177)
T cd01822 153 MQSDGIHPNAEGQPIIAENVWPA 175 (177)
T ss_pred hCCCCCCcCHHHHHHHHHHHHHh
Confidence 45689999999999999998753
No 26
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.07 E-value=9e-05 Score=64.08 Aligned_cols=21 Identities=19% Similarity=0.023 Sum_probs=19.1
Q ss_pred ecCCCChhHHHHHHHHHHHHc
Q 018055 321 SWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 321 fwD~~HPT~~~h~~iA~~~~~ 341 (361)
+.|++||++++|++||+.+++
T Consensus 146 ~~DgiHPn~~G~~~iA~~l~~ 166 (169)
T cd01831 146 IGCDWHPTVAGHQKIAKHLLP 166 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHH
Confidence 579999999999999999875
No 27
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.97 E-value=9.8e-05 Score=64.46 Aligned_cols=107 Identities=19% Similarity=0.290 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHHH-HcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELY-ALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~-~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.+...+++.+.|+.|. .....+|++++.++....+... . -....+.....||+.|++..++
T Consensus 84 ~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~---~----------~~~~~~~~~~~~n~~l~~~a~~----- 145 (191)
T cd01834 84 LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL---P----------DGAEYNANLAAYADAVRELAAE----- 145 (191)
T ss_pred HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC---C----------ChHHHHHHHHHHHHHHHHHHHH-----
Confidence 4556677777777775 3344567777766554322100 0 0235677788899888876654
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
.++.++|++..+.+....+ +..++++|++||+
T Consensus 146 --~~~~~iD~~~~~~~~~~~~----------------------------------------------~~~~~~~D~~Hpn 177 (191)
T cd01834 146 --NGVAFVDLFTPMKEAFQKA----------------------------------------------GEAVLTVDGVHPN 177 (191)
T ss_pred --cCCeEEecHHHHHHHHHhC----------------------------------------------CCccccCCCCCCC
Confidence 2488999999887643322 1123678999999
Q ss_pred HHHHHHHHHHHHcC
Q 018055 329 EAANKLTTWAILNG 342 (361)
Q Consensus 329 ~~~h~~iA~~~~~~ 342 (361)
+++|++||+.+.++
T Consensus 178 ~~G~~~~a~~~~~~ 191 (191)
T cd01834 178 EAGHRALARLWLEA 191 (191)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998753
No 28
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.80 E-value=0.00018 Score=61.09 Aligned_cols=97 Identities=16% Similarity=0.232 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCc-EEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELYALGGR-TFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~GAr-~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
++...+++.+.|+++.+...+ +|+++++||....+ .+.....||+.+++.+++.+..
T Consensus 59 ~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~---------------------~~~~~~~~n~~l~~~~~~~~~~- 116 (157)
T cd01833 59 PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS---------------------GNARIAEYNAAIPGVVADLRTA- 116 (157)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------------------hhHHHHHHHHHHHHHHHHHhcC-
Confidence 345566777777777766432 46666665542211 1456789999999999887653
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
+..+.++|++..+.+ +++.+|++||+
T Consensus 117 -~~~v~~vd~~~~~~~-----------------------------------------------------~~~~~Dg~Hpn 142 (157)
T cd01833 117 -GSPVVLVDMSTGYTT-----------------------------------------------------ADDLYDGLHPN 142 (157)
T ss_pred -CCCEEEEecCCCCCC-----------------------------------------------------cccccCCCCCc
Confidence 567889998754321 12558999999
Q ss_pred HHHHHHHHHHHHcC
Q 018055 329 EAANKLTTWAILNG 342 (361)
Q Consensus 329 ~~~h~~iA~~~~~~ 342 (361)
+++|+.||+.+++.
T Consensus 143 ~~Gy~~~a~~~~~~ 156 (157)
T cd01833 143 DQGYKKMADAWYEA 156 (157)
T ss_pred hHHHHHHHHHHHhh
Confidence 99999999999864
No 29
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.71 E-value=0.00024 Score=60.12 Aligned_cols=100 Identities=20% Similarity=0.254 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHH-cCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELYA-LGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~-~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.....+.+.+.+++|.+ ....+|++++.|+....+. ..+.....+|..+++..++....
T Consensus 86 ~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~- 145 (187)
T cd00229 86 IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG-------------------LLGRALPRYNEAIKAVAAENPAP- 145 (187)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch-------------------hhHHHHHHHHHHHHHHHHHcCCC-
Confidence 34455566666666665 4556788888888777654 12234567777777766654321
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
..+.++|++..+... +..+++||++|||
T Consensus 146 --~~~~~~d~~~~~~~~--------------------------------------------------~~~~~~~Dg~H~~ 173 (187)
T cd00229 146 --SGVDLVDLAALLGDE--------------------------------------------------DKSLYSPDGIHPN 173 (187)
T ss_pred --cceEEEEhhhhhCCC--------------------------------------------------ccccccCCCCCCc
Confidence 346667766543322 2345789999999
Q ss_pred HHHHHHHHHHHHc
Q 018055 329 EAANKLTTWAILN 341 (361)
Q Consensus 329 ~~~h~~iA~~~~~ 341 (361)
+++|+++|+.+++
T Consensus 174 ~~G~~~~a~~i~~ 186 (187)
T cd00229 174 PAGHKLIAEALAS 186 (187)
T ss_pred hhhHHHHHHHHhc
Confidence 9999999999874
No 30
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.64 E-value=0.00046 Score=61.02 Aligned_cols=109 Identities=15% Similarity=0.151 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 169 FLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 169 ~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
+.+...+++...++++.+.|++ +++++.||+... ..+.....+|..+++..++ +
T Consensus 89 ~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~~---------------------~~~~~~~~~~~~~~~~a~~----~ 142 (200)
T cd01829 89 WEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRSP---------------------KLSADMVYLNSLYREEVAK----A 142 (200)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCCh---------------------hHhHHHHHHHHHHHHHHHH----c
Confidence 3455566677777776666766 777777776410 1234456777777665543 2
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
.+.++|++..+.+ + +.|+... + .....++..++..|++|||
T Consensus 143 ---~~~~id~~~~~~~----~---------~~~~~~~-------------------~----~~~~~~~~~~~~~DgvH~~ 183 (200)
T cd01829 143 ---GGEFVDVWDGFVD----E---------NGRFTYS-------------------G----TDVNGKKVRLRTNDGIHFT 183 (200)
T ss_pred ---CCEEEEhhHhhcC----C---------CCCeeee-------------------c----cCCCCcEEEeecCCCceEC
Confidence 3789999876522 1 1222110 0 0011123345667999999
Q ss_pred HHHHHHHHHHHHcC
Q 018055 329 EAANKLTTWAILNG 342 (361)
Q Consensus 329 ~~~h~~iA~~~~~~ 342 (361)
+.+|+++|+.+.+.
T Consensus 184 ~~G~~~~a~~i~~~ 197 (200)
T cd01829 184 AAGGRKLAFYVEKL 197 (200)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998753
No 31
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=97.64 E-value=0.00034 Score=60.46 Aligned_cols=102 Identities=15% Similarity=0.173 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHHHHHc-CCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELYAL-GGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~-GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.+...+++.+.++++.+. ...+++++++||+...+.. ....++....||+.+++..++.
T Consensus 70 ~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~~----------------~~~~~~~~~~~n~~l~~~a~~~---- 129 (174)
T cd01841 70 SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDEI----------------KTRSNTRIQRLNDAIKELAPEL---- 129 (174)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCccccc----------------ccCCHHHHHHHHHHHHHHHHHC----
Confidence 345566777777777765 3567888898887543220 1123456788998888765542
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
.+.++|+++.+.+- . + . ..+.+..|++||+
T Consensus 130 ---~~~~id~~~~~~~~----~--------------~--~---------------------------~~~~~~~DglH~n 159 (174)
T cd01841 130 ---GVTFIDLNDVLVDE----F--------------G--N---------------------------LKKEYTTDGLHFN 159 (174)
T ss_pred ---CCEEEEcHHHHcCC----C--------------C--C---------------------------ccccccCCCcccC
Confidence 38899999875320 0 0 0 0013567999999
Q ss_pred HHHHHHHHHHHHc
Q 018055 329 EAANKLTTWAILN 341 (361)
Q Consensus 329 ~~~h~~iA~~~~~ 341 (361)
+++|+++|+.+.+
T Consensus 160 ~~Gy~~~a~~l~~ 172 (174)
T cd01841 160 PKGYQKLLEILEE 172 (174)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999864
No 32
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.57 E-value=0.0004 Score=59.77 Aligned_cols=97 Identities=19% Similarity=0.260 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHHHH--cCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 171 PQVVSQIAGTVEELYA--LGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 171 ~~~v~~i~~~v~~L~~--~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
+...+++.+.|+++.+ .+ .+|+++++||.+ +. . ...+..+..+|+.+++..++
T Consensus 68 ~~~~~~l~~li~~~~~~~~~-~~vi~~~~~p~~--~~----~-------------~~~~~~~~~~n~~l~~~a~~----- 122 (169)
T cd01828 68 EDIVANYRTILEKLRKHFPN-IKIVVQSILPVG--EL----K-------------SIPNEQIEELNRQLAQLAQQ----- 122 (169)
T ss_pred HHHHHHHHHHHHHHHHHCCC-CeEEEEecCCcC--cc----C-------------cCCHHHHHHHHHHHHHHHHH-----
Confidence 4556667777777777 44 458888888765 10 0 12234568889888876652
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
.++.++|.++.+.+ .. | +..+++.+|++||+
T Consensus 123 --~~~~~id~~~~~~~----~~--~-----------------------------------------~~~~~~~~DgiHpn 153 (169)
T cd01828 123 --EGVTFLDLWAVFTN----AD--G-----------------------------------------DLKNEFTTDGLHLN 153 (169)
T ss_pred --CCCEEEechhhhcC----CC--C-----------------------------------------CcchhhccCccccC
Confidence 25778898865311 00 0 01234668999999
Q ss_pred HHHHHHHHHHHHc
Q 018055 329 EAANKLTTWAILN 341 (361)
Q Consensus 329 ~~~h~~iA~~~~~ 341 (361)
+++|+++|+.+..
T Consensus 154 ~~G~~~~a~~i~~ 166 (169)
T cd01828 154 AKGYAVWAAALQP 166 (169)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 33
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=97.16 E-value=0.0033 Score=54.23 Aligned_cols=100 Identities=21% Similarity=0.283 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHHcCC-cEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELYALGG-RTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~GA-r~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.+...+++.+.|+++.+.+. .+++++.+||. |. . ...+.....+|+.+++..++
T Consensus 69 ~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~--~---------------~~~~~~~~~~n~~~~~~a~~----- 123 (171)
T cd04502 69 PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PA--R---------------WALRPKIRRFNALLKELAET----- 123 (171)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Cc--c---------------hhhHHHHHHHHHHHHHHHhc-----
Confidence 44567777788888877653 35777666542 11 0 01233456777777666532
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
.-.+.++|++..+.+.- + . ...+++..|++||+
T Consensus 124 -~~~v~~vD~~~~~~~~~------------------~--~--------------------------~~~~~~~~DGlH~n 156 (171)
T cd04502 124 -RPNLTYIDVASPMLDAD------------------G--K--------------------------PRAELFQEDGLHLN 156 (171)
T ss_pred -CCCeEEEECcHHHhCCC------------------C--C--------------------------cChhhcCCCCCCCC
Confidence 22578899987654210 0 0 01134567999999
Q ss_pred HHHHHHHHHHHHc
Q 018055 329 EAANKLTTWAILN 341 (361)
Q Consensus 329 ~~~h~~iA~~~~~ 341 (361)
+++|+++|+.+..
T Consensus 157 ~~Gy~~~a~~l~~ 169 (171)
T cd04502 157 DAGYALWRKVIKP 169 (171)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999864
No 34
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=96.75 E-value=0.0096 Score=56.15 Aligned_cols=34 Identities=6% Similarity=-0.021 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCc--EEEEcccCCCC
Q 018055 168 QFLPQVVSQIAGTVEELYALGGR--TFLVLNLAPIG 201 (361)
Q Consensus 168 ~~i~~~v~~i~~~v~~L~~~GAr--~~lv~nlpplg 201 (361)
..+++.-+++.+.|+.|.+..-+ +|+++++|++.
T Consensus 146 tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~ 181 (305)
T cd01826 146 TTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDGR 181 (305)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchh
Confidence 34566677888889999888744 89999999953
No 35
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.46 E-value=0.011 Score=51.61 Aligned_cols=166 Identities=17% Similarity=0.201 Sum_probs=72.5
Q ss_pred cEEEEcCCcccccCCCCCCCCCCCCCCCCCCCCCCCcCCCCCcchHHHHHHhcCCCCCCCccCcCCCCCCccceeeeccc
Q 018055 38 EAIFNFGDSNSDTGGFWAAFPAQSGPFGMTYFKRPAGRASDGRLIVDFLAQALGLPFLSPYLQSIGSDYRHGANYATLAS 117 (361)
Q Consensus 38 ~~l~vFGDSlsD~Gn~~~~~~~~~~PyG~~~~~~~~GRfSnG~vw~d~la~~lg~~~~p~yl~~~~~~~~~G~NfA~gGA 117 (361)
+.++++|+|.+--+. --+-|..|+-.+++.+|+++ +|.+++|+
T Consensus 2 k~~v~YGsSItqG~~----------------------Asrpg~~~~~~~aR~l~~~~---------------iNLGfsG~ 44 (178)
T PF14606_consen 2 KRWVAYGSSITQGAC----------------------ASRPGMAYPAILARRLGLDV---------------INLGFSGN 44 (178)
T ss_dssp -EEEEEE-TT-TTTT-----------------------SSGGGSHHHHHHHHHT-EE---------------EEEE-TCC
T ss_pred CeEEEECChhhcCCC----------------------CCCCcccHHHHHHHHcCCCe---------------EeeeecCc
Confidence 467888998773332 12347899999999999876 69999996
Q ss_pred cccCCCCcccccCccCccHHHHHHHHHHHHHHHhhhcCCCC------CCCCccChhhhHHHHHHHHHHHHHHHHHcC-Cc
Q 018055 118 TVLLPNTSLFVTGISPFSLAIQLNQMKEFKARVDEFHSSCT------SAIGIGGVKQFLPQVVSQIAGTVEELYALG-GR 190 (361)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~gnD~------~~~~~~~~~~~i~~~v~~i~~~v~~L~~~G-Ar 190 (361)
+-. +-.+-.+++... .|. .|.+.. .....+...|+.|.+.= -.
T Consensus 45 ~~l----------------e~~~a~~ia~~~-------a~~~~ld~~~N~~~~-------~~~~~~~~fv~~iR~~hP~t 94 (178)
T PF14606_consen 45 GKL----------------EPEVADLIAEID-------ADLIVLDCGPNMSPE-------EFRERLDGFVKTIREAHPDT 94 (178)
T ss_dssp CS------------------HHHHHHHHHS---------SEEEEEESHHCCTT-------THHHHHHHHHHHHHTT-SSS
T ss_pred ccc----------------CHHHHHHHhcCC-------CCEEEEEeecCCCHH-------HHHHHHHHHHHHHHHhCCCC
Confidence 543 223333332221 121 112222 23445555666666543 45
Q ss_pred EEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhCCC
Q 018055 191 TFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQNPT 270 (361)
Q Consensus 191 ~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~ 270 (361)
-|+++.... .... . .........+.+|+.+++.+++++++ .+-+++|+|-..++-+-
T Consensus 95 PIllv~~~~--~~~~-~--------------~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~d----- 151 (178)
T PF14606_consen 95 PILLVSPIP--YPAG-Y--------------FDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGDD----- 151 (178)
T ss_dssp -EEEEE------TTT-T--------------S--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS--------
T ss_pred CEEEEecCC--cccc-c--------------cCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCcc-----
Confidence 566655222 1111 0 01122345789999999999999765 46678888876542110
Q ss_pred CCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHH
Q 018055 271 SHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAIL 340 (361)
Q Consensus 271 ~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~ 340 (361)
.-..-|++|||+.+|..+|+.+.
T Consensus 152 -----------------------------------------------~e~tvDgvHP~DlG~~~~a~~l~ 174 (178)
T PF14606_consen 152 -----------------------------------------------HEATVDGVHPNDLGMMRMADALE 174 (178)
T ss_dssp ----------------------------------------------------------------------
T ss_pred -----------------------------------------------ccccccccccccccccccccccc
Confidence 00235789999999999999875
No 36
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=96.28 E-value=0.095 Score=46.79 Aligned_cols=22 Identities=18% Similarity=0.155 Sum_probs=19.8
Q ss_pred cCCCChhHHHHHHHHHHHHcCC
Q 018055 322 WDGIHATEAANKLTTWAILNGS 343 (361)
Q Consensus 322 wD~~HPT~~~h~~iA~~~~~~~ 343 (361)
+|++||+.++|+.+|+.+.+..
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~l 208 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEVL 208 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHHH
Confidence 9999999999999999987543
No 37
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=96.16 E-value=0.025 Score=47.84 Aligned_cols=22 Identities=32% Similarity=0.338 Sum_probs=19.3
Q ss_pred eecCCCChhHHHHHHHHHHHHc
Q 018055 320 VSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 320 lfwD~~HPT~~~h~~iA~~~~~ 341 (361)
+..|++||++++|+++|+.+.+
T Consensus 127 ~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 127 FYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hcCCCCCCChhhHHHHHHHHHH
Confidence 4469999999999999999875
No 38
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=95.44 E-value=0.033 Score=49.63 Aligned_cols=111 Identities=19% Similarity=0.145 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHcC-CcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 170 LPQVVSQIAGTVEELYALG-GRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~G-Ar~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
+++-++++++.++-|-..- -.+|++++-||+...-........ ...-.++.|+.+..|++.+.+..+++
T Consensus 95 l~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e~------~~~~~~RtNe~~~~Ya~ac~~la~e~---- 164 (245)
T KOG3035|consen 95 LEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQEP------YVLGPERTNETVGTYAKACANLAQEI---- 164 (245)
T ss_pred HHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhccc------hhccchhhhhHHHHHHHHHHHHHHHh----
Confidence 3455667777777666554 457888898888876443322110 11113468999999999998887765
Q ss_pred CCceEEEeccchHHHHHHhCCCCCCCCCCcccccCCCCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChh
Q 018055 249 PNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGHGDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHAT 328 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT 328 (361)
++..+|..+.+++.- .. .+. .|||++|.|
T Consensus 165 ---~l~~vdlws~~Q~~~---------------------dw--------------------~~~-------~ltDGLHlS 193 (245)
T KOG3035|consen 165 ---GLYVVDLWSKMQESD---------------------DW--------------------QTS-------CLTDGLHLS 193 (245)
T ss_pred ---CCeeeeHHhhhhhcc---------------------cH--------------------HHH-------Hhccceeec
Confidence 577888877765520 00 122 589999999
Q ss_pred HHHHHHHHHHHHc
Q 018055 329 EAANKLTTWAILN 341 (361)
Q Consensus 329 ~~~h~~iA~~~~~ 341 (361)
..+++++.++++.
T Consensus 194 ~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 194 PKGNKIVFDEILK 206 (245)
T ss_pred cccchhhHHHHHH
Confidence 9999999999885
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=95.07 E-value=0.88 Score=44.35 Aligned_cols=32 Identities=9% Similarity=0.148 Sum_probs=26.4
Q ss_pred CCCceecCCCChhHHHHHHHHHHHHcCCCCCC
Q 018055 316 PQDYVSWDGIHATEAANKLTTWAILNGSYFDP 347 (361)
Q Consensus 316 p~~ylfwD~~HPT~~~h~~iA~~~~~~~~~~p 347 (361)
+.+++--|-+|.++++|.++|.++|+..+.-+
T Consensus 323 d~~ffa~DcfHlS~~GHa~~ak~lWNnl~epv 354 (397)
T KOG3670|consen 323 DLTFFAPDCFHLSQRGHAIAAKHLWNNLFEPV 354 (397)
T ss_pred CchhcccCccccchHHHHHHHHHHHHHhhcCC
Confidence 34566779999999999999999999886433
No 40
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=79.17 E-value=33 Score=30.07 Aligned_cols=20 Identities=25% Similarity=0.320 Sum_probs=17.8
Q ss_pred cCCCChhHHHHHHHHHHHHc
Q 018055 322 WDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 322 wD~~HPT~~~h~~iA~~~~~ 341 (361)
.|++|..+.+|+.+++.++.
T Consensus 161 ~DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 161 RDGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCCcCcCHHHHHHHHHHHHH
Confidence 57899999999999998863
No 41
>PLN02757 sirohydrochlorine ferrochelatase
Probab=76.91 E-value=7.4 Score=33.19 Aligned_cols=64 Identities=16% Similarity=0.336 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q 018055 177 IAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICV 256 (361)
Q Consensus 177 i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~ 256 (361)
+.+.|++|.+.|+|+|+|. |.++..... ...-+.+.++++++++|+.+|.+.
T Consensus 60 l~eal~~l~~~g~~~vvVv--------P~FL~~G~H--------------------~~~DIp~~v~~~~~~~p~~~i~~~ 111 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIVS--------PFFLSPGRH--------------------WQEDIPALTAEAAKEHPGVKYLVT 111 (154)
T ss_pred HHHHHHHHHHCCCCEEEEE--------EhhhcCCcc--------------------hHhHHHHHHHHHHHHCCCcEEEEC
Confidence 6677788888999999995 777754321 123456778889999999998875
Q ss_pred c---cchHHHHHHhC
Q 018055 257 D---THSVLLELFQN 268 (361)
Q Consensus 257 D---~~~~~~~ii~n 268 (361)
. .+..+.+++.+
T Consensus 112 ~pLG~~p~l~~ll~~ 126 (154)
T PLN02757 112 APIGLHELMVDVVND 126 (154)
T ss_pred CCCCCCHHHHHHHHH
Confidence 4 44566666553
No 42
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=68.54 E-value=12 Score=28.89 Aligned_cols=54 Identities=28% Similarity=0.423 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEE
Q 018055 176 QIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLIC 255 (361)
Q Consensus 176 ~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~ 255 (361)
.+.+.+++|.+.|+++++|. |.+...... ....+...+++++.++|+.++.+
T Consensus 45 ~~~~~l~~l~~~g~~~v~vv--------Plfl~~G~h--------------------~~~dip~~~~~~~~~~~~~~i~~ 96 (101)
T cd03416 45 SLAEALDELAAQGATRIVVV--------PLFLLAGGH--------------------VKEDIPAALAAARARHPGVRIRY 96 (101)
T ss_pred CHHHHHHHHHHcCCCEEEEE--------eeEeCCCcc--------------------ccccHHHHHHHHHHHCCCeEEEe
Confidence 35556788888999999996 766654321 11334556667777889988887
Q ss_pred ec
Q 018055 256 VD 257 (361)
Q Consensus 256 ~D 257 (361)
.+
T Consensus 97 ~~ 98 (101)
T cd03416 97 AP 98 (101)
T ss_pred cC
Confidence 54
No 43
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=66.49 E-value=23 Score=33.61 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNA 251 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~ 251 (361)
..++.+.+.++++.++|.+.|+++++|.. .-+... +.++. |..+...++.+++++|+.
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~gs-------~A~~~--------------~g~v~~air~iK~~~p~l 105 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH-KDEIGS-------EAYDP--------------DGIVQRAIRAIKEAVPEL 105 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCcc-------cccCC--------------CChHHHHHHHHHHhCCCc
Confidence 34788999999999999999999998642 211110 11111 234567788888999886
Q ss_pred eEEEecc
Q 018055 252 SLICVDT 258 (361)
Q Consensus 252 ~i~~~D~ 258 (361)
-| ..|+
T Consensus 106 ~v-i~Dv 111 (314)
T cd00384 106 VV-ITDV 111 (314)
T ss_pred EE-EEee
Confidence 43 4443
No 44
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=65.85 E-value=14 Score=33.68 Aligned_cols=63 Identities=14% Similarity=0.226 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNA 251 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~ 251 (361)
...+-+.+.++.|...|.|+|+|+|= . ++-. ..|+..+++|++++++.
T Consensus 83 t~~~~l~di~~sl~~~Gf~~ivivng-----------H----------gGN~-----------~~l~~~~~~l~~~~~~~ 130 (237)
T PF02633_consen 83 TLIALLRDILRSLARHGFRRIVIVNG-----------H----------GGNI-----------AALEAAARELRQEYPGV 130 (237)
T ss_dssp HHHHHHHHHHHHHHHHT--EEEEEES-----------S----------TTHH-----------HHHHHHHHHHHHHGCC-
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEC-----------C----------HhHH-----------HHHHHHHHHHHhhCCCc
Confidence 34445667778888999999999971 1 1101 24566677777778899
Q ss_pred eEEEeccchHHHHHH
Q 018055 252 SLICVDTHSVLLELF 266 (361)
Q Consensus 252 ~i~~~D~~~~~~~ii 266 (361)
.+.++|.+.+.....
T Consensus 131 ~v~~~~~~~~~~~~~ 145 (237)
T PF02633_consen 131 KVFVINWWQLAEDEG 145 (237)
T ss_dssp EEEEEEGGGCSHCHH
T ss_pred EEEEeechhccchhh
Confidence 999999998876553
No 45
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=62.16 E-value=30 Score=33.00 Aligned_cols=64 Identities=22% Similarity=0.269 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNA 251 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~ 251 (361)
..++.+.+.++++.++|.+.|+++++|+. .-+... +.++. |..+...++.+++++|+.
T Consensus 58 ~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~~gs-------~A~~~--------------~g~v~~air~iK~~~pdl 115 (322)
T PRK13384 58 LPESALADEIERLYALGIRYVMPFGISHH-KDAKGS-------DTWDD--------------NGLLARMVRTIKAAVPEM 115 (322)
T ss_pred ECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCCCcc-------cccCC--------------CChHHHHHHHHHHHCCCe
Confidence 34788999999999999999999998642 211100 01111 344567788899999986
Q ss_pred eEEEecc
Q 018055 252 SLICVDT 258 (361)
Q Consensus 252 ~i~~~D~ 258 (361)
-| +.|+
T Consensus 116 ~v-i~DV 121 (322)
T PRK13384 116 MV-IPDI 121 (322)
T ss_pred EE-Eeee
Confidence 43 4443
No 46
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=62.13 E-value=30 Score=33.07 Aligned_cols=64 Identities=11% Similarity=0.223 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNA 251 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~ 251 (361)
..++.+.+.++++.++|.+.|+++++|.. .-+... +.++. |..+...++.+++++|+.
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~gs-------~A~~~--------------~g~v~rair~iK~~~p~l 113 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDGS-------EAYNP--------------DGLVQRAIRAIKKAFPEL 113 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCcccc-------cccCC--------------CCHHHHHHHHHHHhCCCc
Confidence 34788999999999999999999998432 211110 01111 234567788888999886
Q ss_pred eEEEecc
Q 018055 252 SLICVDT 258 (361)
Q Consensus 252 ~i~~~D~ 258 (361)
- +..|+
T Consensus 114 ~-vi~DV 119 (323)
T PRK09283 114 G-VITDV 119 (323)
T ss_pred E-EEEee
Confidence 4 34454
No 47
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=60.96 E-value=8.9 Score=29.89 Aligned_cols=54 Identities=28% Similarity=0.400 Sum_probs=36.5
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q 018055 177 IAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICV 256 (361)
Q Consensus 177 i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~ 256 (361)
+.+.+++|.+.|+++|+|+ |.++.... ....-+.+.+++++.++|+.+|.+.
T Consensus 39 l~~~l~~l~~~g~~~ivvv--------P~fL~~G~--------------------h~~~DIp~~l~~~~~~~~~~~v~~~ 90 (105)
T PF01903_consen 39 LEEALERLVAQGARRIVVV--------PYFLFPGY--------------------HVKRDIPEALAEARERHPGIEVRVA 90 (105)
T ss_dssp CHHCCHHHHCCTCSEEEEE--------EESSSSSH--------------------HHHCHHHHHHCHHHHCSTTEEEEE-
T ss_pred HHHHHHHHHHcCCCeEEEE--------eeeecCcc--------------------chHhHHHHHHHHHHhhCCceEEEEC
Confidence 4556688889999999996 76664321 1112356788889999999988875
Q ss_pred cc
Q 018055 257 DT 258 (361)
Q Consensus 257 D~ 258 (361)
..
T Consensus 91 ~p 92 (105)
T PF01903_consen 91 PP 92 (105)
T ss_dssp --
T ss_pred CC
Confidence 53
No 48
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=60.89 E-value=28 Score=33.15 Aligned_cols=65 Identities=15% Similarity=0.207 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCC-CCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCC
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAP-IGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPN 250 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpp-lg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~ 250 (361)
..++.+.+.++++.++|.+.|++++++| -..-+... +.++. |..+...++.+++++|+
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~gs-------~A~~~--------------~g~v~~air~iK~~~p~ 109 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDGS-------EAYNP--------------DNLVCRAIRAIKEAFPE 109 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcccc-------cccCC--------------CChHHHHHHHHHHhCCC
Confidence 3478899999999999999999999843 11222111 00111 23456778888899988
Q ss_pred ceEEEecc
Q 018055 251 ASLICVDT 258 (361)
Q Consensus 251 ~~i~~~D~ 258 (361)
.- ++.|+
T Consensus 110 l~-vi~DV 116 (320)
T cd04823 110 LG-IITDV 116 (320)
T ss_pred cE-EEEee
Confidence 63 34453
No 49
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=58.30 E-value=37 Score=32.51 Aligned_cols=65 Identities=18% Similarity=0.372 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCce
Q 018055 173 VVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNAS 252 (361)
Q Consensus 173 ~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~ 252 (361)
.++.+.+.++++.++|.+.|+++++.+ |......+ .+.. .=|..+...++.+++++|+.
T Consensus 55 sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~g-----------s~a~-----~~~g~v~~air~iK~~~pdl- 113 (324)
T PF00490_consen 55 SIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEEG-----------SEAY-----NPDGLVQRAIRAIKKAFPDL- 113 (324)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS------------GGGG-----STTSHHHHHHHHHHHHSTTS-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcch-----------hccc-----CCCChHHHHHHHHHHhCCCc-
Confidence 368889999999999999999998733 22121111 0001 11234567788889999996
Q ss_pred EEEecc
Q 018055 253 LICVDT 258 (361)
Q Consensus 253 i~~~D~ 258 (361)
++..|+
T Consensus 114 ~vi~Dv 119 (324)
T PF00490_consen 114 LVITDV 119 (324)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 444454
No 50
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=55.43 E-value=39 Score=32.22 Aligned_cols=66 Identities=18% Similarity=0.184 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCCCC-ccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCC
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAPIG-CYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPN 250 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpplg-~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~ 250 (361)
..++.+.+.++++.++|.+.|+++++|+-. .-+.. + .+.++. |..++..++.+++++|+
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~----g--s~a~~~--------------~g~v~~air~iK~~~pd 107 (320)
T cd04824 48 YGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS----G--SAADDE--------------DGPVIQAIKLIREEFPE 107 (320)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc----c--ccccCC--------------CChHHHHHHHHHHhCCC
Confidence 347889999999999999999999986432 22220 0 011111 23346677888888888
Q ss_pred ceEEEecc
Q 018055 251 ASLICVDT 258 (361)
Q Consensus 251 ~~i~~~D~ 258 (361)
.- ++.|+
T Consensus 108 l~-vi~Dv 114 (320)
T cd04824 108 LL-IACDV 114 (320)
T ss_pred cE-EEEee
Confidence 64 34443
No 51
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=49.35 E-value=69 Score=26.12 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceE
Q 018055 174 VSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASL 253 (361)
Q Consensus 174 v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i 253 (361)
+..+.+.+++|.+.|.++|+|. |...... ..| ..|.+.+++++ +|..+|
T Consensus 55 ~p~~~eaL~~l~~~G~~~V~V~--------Pl~l~~G--------------------~e~-~di~~~v~~~~--~~~~~i 103 (127)
T cd03412 55 VDTPEEALAKLAADGYTEVIVQ--------SLHIIPG--------------------EEY-EKLKREVDAFK--KGFKKI 103 (127)
T ss_pred CCCHHHHHHHHHHCCCCEEEEE--------eCeeECc--------------------HHH-HHHHHHHHHHh--CCCceE
Confidence 3567888999999999999997 5444321 112 45666777766 567677
Q ss_pred EEec
Q 018055 254 ICVD 257 (361)
Q Consensus 254 ~~~D 257 (361)
.+..
T Consensus 104 ~~g~ 107 (127)
T cd03412 104 KLGR 107 (127)
T ss_pred EEcc
Confidence 6653
No 52
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=47.29 E-value=71 Score=25.21 Aligned_cols=52 Identities=25% Similarity=0.399 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEE
Q 018055 176 QIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLIC 255 (361)
Q Consensus 176 ~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~ 255 (361)
.+.+.+++|.+.|+++++|. |.+..... .. ..+...+++++++ |+.++.+
T Consensus 46 ~~~~~l~~l~~~g~~~i~vv--------P~fL~~G~--------------------h~-~~i~~~~~~~~~~-~~~~i~~ 95 (117)
T cd03414 46 SLPEALERLRALGARRVVVL--------PYLLFTGV--------------------LM-DRIEEQVAELAAE-PGIEFVL 95 (117)
T ss_pred CHHHHHHHHHHcCCCEEEEE--------echhcCCc--------------------hH-HHHHHHHHHHHhC-CCceEEE
Confidence 36677888888999999986 66654321 11 2245567777777 8877766
Q ss_pred ec
Q 018055 256 VD 257 (361)
Q Consensus 256 ~D 257 (361)
..
T Consensus 96 ~~ 97 (117)
T cd03414 96 AP 97 (117)
T ss_pred CC
Confidence 43
No 53
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=43.62 E-value=94 Score=28.78 Aligned_cols=84 Identities=10% Similarity=0.192 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 169 FLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 169 ~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.++++++.+.+.++.|.+..-+-=+|+++.|+ |...+.... | .-..|.+++ ..|+..+.+|.+++
T Consensus 146 s~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV---rl~~T~~~~-----d----~~~an~~SK---s~Lr~a~~~l~~~~ 210 (251)
T PF08885_consen 146 SVEEILEDLEAIIDLLRSINPDIKIILTVSPV---RLIATFRDR-----D----GLVANQYSK---STLRAAAHELVRAF 210 (251)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCceEEEEeccc---hhhcccccc-----c----chhhhhhhH---HHHHHHHHHHHhcC
Confidence 45677888888888888877665566678886 333322210 1 112333333 46788888888875
Q ss_pred CCceEEEeccchHHHHHHhCC
Q 018055 249 PNASLICVDTHSVLLELFQNP 269 (361)
Q Consensus 249 p~~~i~~~D~~~~~~~ii~nP 269 (361)
+ ++.||-.|.++.+-.+++
T Consensus 211 ~--~v~YFPSYEiv~d~lrdy 229 (251)
T PF08885_consen 211 D--DVDYFPSYEIVMDELRDY 229 (251)
T ss_pred C--CceEcchHhhccCccccc
Confidence 4 689999998877654444
No 54
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=42.71 E-value=21 Score=26.55 Aligned_cols=22 Identities=32% Similarity=0.468 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHcCCcEEEEccc
Q 018055 176 QIAGTVEELYALGGRTFLVLNL 197 (361)
Q Consensus 176 ~i~~~v~~L~~~GAr~~lv~nl 197 (361)
.+.+.+.+|.++||+.|++..+
T Consensus 51 ~~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 51 QVWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp CHHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHHcCCCEEEEEec
Confidence 3566788899999999999864
No 55
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=40.96 E-value=33 Score=27.00 Aligned_cols=23 Identities=30% Similarity=0.515 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEccc
Q 018055 175 SQIAGTVEELYALGGRTFLVLNL 197 (361)
Q Consensus 175 ~~i~~~v~~L~~~GAr~~lv~nl 197 (361)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 46788899999999999999754
No 56
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.14 E-value=1.3e+02 Score=29.03 Aligned_cols=145 Identities=14% Similarity=0.210 Sum_probs=79.5
Q ss_pred ccHHHHHHHHHHHHHHHh---hhcC-CCCCCCCccCh--hhhHHHHHHHHHHHHHHHHHcCC---cEEEEcccCCCCccc
Q 018055 134 FSLAIQLNQMKEFKARVD---EFHS-SCTSAIGIGGV--KQFLPQVVSQIAGTVEELYALGG---RTFLVLNLAPIGCYP 204 (361)
Q Consensus 134 ~~l~~Qv~~f~~~~~~~~---~~~g-nD~~~~~~~~~--~~~i~~~v~~i~~~v~~L~~~GA---r~~lv~nlpplg~~P 204 (361)
++-..++..++....... ...| ||++.+...+. ..--+...+++.+-|.+|.+.-. -+++.+++|+.-.
T Consensus 162 fdWpk~i~~~l~~~~~~a~vVV~lGaND~q~~~~gd~~~kf~S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r~-- 239 (354)
T COG2845 162 FDWPKAIPELLDKHPKPAAVVVMLGANDRQDFKVGDVYEKFRSDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFRK-- 239 (354)
T ss_pred cccHHHHHHHHHhcCCccEEEEEecCCCHHhcccCCeeeecCchHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCccc--
Confidence 355556665554432211 1224 77643333332 11223556677777777766433 2677778876421
Q ss_pred cccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCCCCcccccCC
Q 018055 205 AFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLKYGTQACCGH 284 (361)
Q Consensus 205 ~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~~~~Cc~~ 284 (361)
+.+|+-...+|..+++.++.+. | ++ +|+++.+-+. +..
T Consensus 240 -------------------~~l~~dm~~ln~iy~~~vE~~~----g-k~--i~i~d~~v~e---~G~------------- 277 (354)
T COG2845 240 -------------------KKLNADMVYLNKIYSKAVEKLG----G-KF--IDIWDGFVDE---GGK------------- 277 (354)
T ss_pred -------------------cccchHHHHHHHHHHHHHHHhC----C-eE--EEeccccccc---CCc-------------
Confidence 2466668899999999888873 2 32 3444332211 111
Q ss_pred CCCCccCCcccccCCccccCCCccccccCCCCCCceecCCCChhHHHHHHHHHHHHc
Q 018055 285 GDGAYNFDAKVFCGNTKVINGSTVTATACSDPQDYVSWDGIHATEAANKLTTWAILN 341 (361)
Q Consensus 285 g~g~~n~~~~~~C~~~~~~~g~~~~~~~C~~p~~ylfwD~~HPT~~~h~~iA~~~~~ 341 (361)
.|. . ...+++|+ +-++.-=|++|.|.++-+.+|.++..
T Consensus 278 ---~f~-----~--~~~D~NGq---------~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 278 ---DFV-----T--TGVDINGQ---------PVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred ---eeE-----E--eccccCCc---------eEEEeccCCceechhhHHHHHHHHHH
Confidence 010 0 01123342 23455679999999999999999863
No 57
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=38.78 E-value=53 Score=26.99 Aligned_cols=26 Identities=12% Similarity=0.121 Sum_probs=23.1
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 223 MISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 223 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.+..+.++..||+.|++.|+++++++
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999886
No 58
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=36.99 E-value=37 Score=33.10 Aligned_cols=40 Identities=23% Similarity=0.256 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccc
Q 018055 169 FLPQVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLV 208 (361)
Q Consensus 169 ~i~~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~ 208 (361)
.+......+.+++..+++++..+|+..+.|.++..|....
T Consensus 126 ~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 126 SIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred cccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 3445566788899999999999999999999999998774
No 59
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=36.35 E-value=84 Score=29.91 Aligned_cols=65 Identities=15% Similarity=0.280 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCc
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNA 251 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~ 251 (361)
..++.+.+.++++.++|.+-|+++++|+-+. ....+ +..++. |..++..++.+++++|+.
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~~~~----Kd~~g--s~A~~~--------------~givqravr~ik~~~p~l 117 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPDDSK----KDETG--SEAYDP--------------DGIVQRAVRAIKEAFPEL 117 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCcccc----cCccc--ccccCC--------------CChHHHHHHHHHHhCCCe
Confidence 4488899999999999999999999986321 11111 011111 234567778888888854
Q ss_pred eEEEec
Q 018055 252 SLICVD 257 (361)
Q Consensus 252 ~i~~~D 257 (361)
++.-|
T Consensus 118 -~iitD 122 (330)
T COG0113 118 -VVITD 122 (330)
T ss_pred -EEEee
Confidence 33444
No 60
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=35.48 E-value=85 Score=27.38 Aligned_cols=29 Identities=17% Similarity=0.174 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcEEEEcc
Q 018055 168 QFLPQVVSQIAGTVEELYALGGRTFLVLN 196 (361)
Q Consensus 168 ~~i~~~v~~i~~~v~~L~~~GAr~~lv~n 196 (361)
.-+..+-..|.+.|.+|++.|.+.|+.-+
T Consensus 22 ~~~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 22 PKIQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 34566778899999999999999988753
No 61
>PF02402 Lysis_col: Lysis protein; InterPro: IPR003059 The DNA sequence of the entire colicin E2 operon has been determined []. The operon comprises the colicin activity gene (ceaB), the colicin immunity gene (ceiB) and the lysis gene (celB), which is essential for colicin release from producing cells []. A putative LexA binding site is located upstream from ceaB, and a rho-independent terminator structure is located downstream from celB []. Comparison of the amino acid sequences of colicin E2 and cloacin DF13 reveal extensive similarity. These colicins have different modes of action and recognise different cell surface receptors; the two major regions of heterology at the C terminus, and in the C-terminal end of the central region are thought to correspond to the catalytic and receptor-recognition domains, respectively []. Sequence similarities between colicins E2, A and E1 [] are less striking. The colicin E2 (pyocin) immunity protein does not share similarity with either the colicin E3 or cloacin DF13 [] immunity proteins. By contrast, the lysis proteins of the ColE2, ColE1 and CloDF13 plasmids are almost identical except in the N-terminal regions, which themselves are similar to lipoprotein signal peptides []. Processing of the ColE2 prolysis protein to the mature form is prevented by globomycin, a specific inhibitor of the lipoprotein signal peptidase []. The mature ColE2 lysis protein is located in the cell envelope [].; GO: 0009405 pathogenesis, 0019835 cytolysis, 0019867 outer membrane
Probab=32.89 E-value=10 Score=24.97 Aligned_cols=23 Identities=17% Similarity=0.119 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Q 018055 6 FQKIFVSFGKFITLGVVMMAMLCGI 30 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~ 30 (361)
|||++...+ +++.++|.+++++.
T Consensus 1 MkKi~~~~i--~~~~~~L~aCQaN~ 23 (46)
T PF02402_consen 1 MKKIIFIGI--FLLTMLLAACQANY 23 (46)
T ss_pred CcEEEEeHH--HHHHHHHHHhhhcc
Confidence 677766544 33335555556543
No 62
>PRK13660 hypothetical protein; Provisional
Probab=32.83 E-value=2.3e+02 Score=24.87 Aligned_cols=27 Identities=11% Similarity=0.103 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEcc
Q 018055 170 LPQVVSQIAGTVEELYALGGRTFLVLN 196 (361)
Q Consensus 170 i~~~v~~i~~~v~~L~~~GAr~~lv~n 196 (361)
+..+-..|.+.|.+|++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 444556788999999999999888853
No 63
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=30.97 E-value=1.4e+02 Score=27.93 Aligned_cols=28 Identities=21% Similarity=0.381 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcccCC
Q 018055 172 QVVSQIAGTVEELYALGGRTFLVLNLAP 199 (361)
Q Consensus 172 ~~v~~i~~~v~~L~~~GAr~~lv~nlpp 199 (361)
.-++.+.+.+..|.+.|.|-++++++|+
T Consensus 66 ~G~~rL~e~l~plv~~Gl~sViLfgvv~ 93 (340)
T KOG2794|consen 66 LGVNRLKEELAPLVAKGLRSVILFGVVP 93 (340)
T ss_pred HHHHHHHHHHHHHHHhccceEEEecCCC
Confidence 3477799999999999999999999864
No 64
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=28.83 E-value=99 Score=24.90 Aligned_cols=26 Identities=12% Similarity=0.111 Sum_probs=23.2
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 223 MISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 223 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
.++.+.++..||+.|++.|++++++|
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45678899999999999999999986
No 65
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=27.10 E-value=97 Score=20.94 Aligned_cols=15 Identities=13% Similarity=0.215 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHH
Q 018055 6 FQKIFVSFGKFITLG 20 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~ 20 (361)
|||++......++++
T Consensus 2 mKk~i~~i~~~l~~~ 16 (48)
T PRK10081 2 VKKTIAAIFSVLVLS 16 (48)
T ss_pred hHHHHHHHHHHHHHH
Confidence 788887544333333
No 66
>PF04272 Phospholamban: Phospholamban; InterPro: IPR005984 Phospholamban (PLB) is a small protein (52 amino acids) that regulates the affinity of the cardiac sarcoplasmic reticulum Ca2+-ATPase (SERCA2a) for calcium. PLB is present in cardiac myocytes, in slow-twitch and smooth muscle and is expressed also in aorta endothelial cells in which it could play a role in tissue relaxation. The phosphorylation/dephosphorylation of phospholamban removes and restores, respectively, its inhibitory activity on SERCA2a. It has in fact been shown that phospholamban, in its non-phosphorylated form, binds to SERCA2a and inhibits this pump by lowering its affinity for Ca2+, whereas the phosphorylated form does not exert the inhibition. PLB is phosphorylated at two sites, namely at Ser-16 for a cAMP-dependent phosphokinase and at Thr-17 for a Ca2+/calmodulin-dependent phosphokinase, phosphorylation at Ser-16 being a prerequisite for the phosphorylation at Thr-17. The structure of a 36-amino-acid-long N-terminal fragment of human phospholamban phosphorylated at Ser-16 and Thr-17 and Cys36Ser mutated was determined from nuclear magnetic resonance data. The peptide assumes a conformation characterised by two alpha-helices connected by an irregular strand, which comprises the amino acids from Arg-13 to Pro-21. The proline is in a trans conformation. The two phosphate groups on Ser-16 and Thr-17 are shown to interact preferably with the side chains of Arg-14 and Arg-13, respectively [].; GO: 0005246 calcium channel regulator activity, 0042030 ATPase inhibitor activity, 0006816 calcium ion transport, 0016020 membrane; PDB: 1N7L_A 1FJP_A 1FJK_A 2HYN_C 1ZLL_D 1PLP_A 3O7L_I.
Probab=24.83 E-value=1.5e+02 Score=19.61 Aligned_cols=20 Identities=20% Similarity=0.436 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 018055 5 QFQKIFVSFGKFITLGVVMM 24 (361)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~ 24 (361)
.||.+|+.|-.+|.-.++.|
T Consensus 27 nlqelfvnfclilicllli~ 46 (52)
T PF04272_consen 27 NLQELFVNFCLILICLLLIC 46 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 48899999987555444434
No 67
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=23.82 E-value=34 Score=28.40 Aligned_cols=22 Identities=27% Similarity=0.474 Sum_probs=17.5
Q ss_pred HcCCcEEEEcccCCCCc-ccccc
Q 018055 186 ALGGRTFLVLNLAPIGC-YPAFL 207 (361)
Q Consensus 186 ~~GAr~~lv~nlpplg~-~P~~~ 207 (361)
..|||+||++|+|-|.. .|.++
T Consensus 42 ~~GARdFVfwNipQiQykNP~VQ 64 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQYKNPKVQ 64 (169)
T ss_pred ccCccceEEecchhhcccCCceE
Confidence 67999999999998763 46555
No 68
>PF10916 DUF2712: Protein of unknown function (DUF2712); InterPro: IPR020208 This entry represents a group of uncharacterised proteins.
Probab=23.82 E-value=63 Score=27.10 Aligned_cols=23 Identities=9% Similarity=0.163 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 018055 6 FQKIFVSFGKFITLGVVMMAMLC 28 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (361)
|||+.....++++++++.+.+.+
T Consensus 1 ~~kf~~~~~~~~~a~~~~~~~~a 23 (146)
T PF10916_consen 1 MKKFAKKNVRLILAAAIGISVFA 23 (146)
T ss_pred CchHHHHHHHHHHHHHHHHHHHh
Confidence 78999999998888887665543
No 69
>PF03627 PapG_N: PapG carbohydrate binding domain; InterPro: IPR005310 PapG, the adhesin of the P-pili, is situated at the tip and is only a minor component of the whole pilus structure. A two-domain structure has been postulated for PapG; a carbohydrate binding N terminus (this domain) and chaperone binding C terminus. The carbohydrate-binding domain interacts with the receptor glycan [, ].; GO: 0030246 carbohydrate binding, 0007155 cell adhesion; PDB: 2WMP_B 3ME0_B 1J8S_A 1J8R_A.
Probab=23.47 E-value=31 Score=30.29 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCccEEEEcCCccc-ccCCC
Q 018055 6 FQKIFVSFGKFITLGVVMMAMLCGISDSKCEFEAIFNFGDSNS-DTGGF 53 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~vFGDSls-D~Gn~ 53 (361)
|||||--|+ .||...++-+-++-.=.-+|.|+|=.+ +.||.
T Consensus 1 MKKWfPAfL-------FLslSG~ndAlagw~nvmFYafnd~~~~~~gnv 42 (226)
T PF03627_consen 1 MKKWFPAFL-------FLSLSGCNDALAGWHNVMFYAFNDYSSYNAGNV 42 (226)
T ss_dssp ------------------------------EEEEEEEE--EEEEEEEEE
T ss_pred Cccchhhhe-------eeeecCCCcchhhhheeEEEEecCcccccCccE
Confidence 899998444 233223322212122245688999554 55553
No 70
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=23.33 E-value=67 Score=25.01 Aligned_cols=14 Identities=0% Similarity=0.152 Sum_probs=7.6
Q ss_pred HHHHHHHHHHhhcc
Q 018055 17 ITLGVVMMAMLCGI 30 (361)
Q Consensus 17 ~~~~~~~~~~~~~~ 30 (361)
+|+++||++.++++
T Consensus 12 ~LA~lLlisSevaa 25 (95)
T PF07172_consen 12 LLAALLLISSEVAA 25 (95)
T ss_pred HHHHHHHHHhhhhh
Confidence 44555556555544
No 71
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=22.83 E-value=1.7e+02 Score=25.96 Aligned_cols=50 Identities=12% Similarity=0.293 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHHHHHHHHHHHHHHHHHHhcCCCceE
Q 018055 174 VSQIAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNAVLDYNNMLKEALAQTRRNLPNASL 253 (361)
Q Consensus 174 v~~i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~~~~~N~~L~~~l~~l~~~~p~~~i 253 (361)
-..+...++.|.+.|+++|.+..+ +.+ ...++.+.++||+++|
T Consensus 135 G~Tl~~ai~~L~~~G~~~I~v~~l--l~~-----------------------------------~~gl~~l~~~~p~v~i 177 (207)
T TIGR01091 135 GGTMIAALDLLKKRGAKKIKVLSI--VAA-----------------------------------PEGIEAVEKAHPDVDI 177 (207)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE--ecC-----------------------------------HHHHHHHHHHCCCCEE
Confidence 346778889999999999888875 110 1345566778999999
Q ss_pred EEeccch
Q 018055 254 ICVDTHS 260 (361)
Q Consensus 254 ~~~D~~~ 260 (361)
+..-+..
T Consensus 178 ~~~~id~ 184 (207)
T TIGR01091 178 YTAAIDE 184 (207)
T ss_pred EEEEECC
Confidence 8775554
No 72
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=22.77 E-value=2.3e+02 Score=27.20 Aligned_cols=79 Identities=19% Similarity=0.253 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCcEEEEcccCCCCccccccccCCCCCCCCCcCchhhHhhHH------------------HHHHHHHHH
Q 018055 177 IAGTVEELYALGGRTFLVLNLAPIGCYPAFLVQLPHSSSDLDAYGCMISYNNA------------------VLDYNNMLK 238 (361)
Q Consensus 177 i~~~v~~L~~~GAr~~lv~nlpplg~~P~~~~~~~~~~~~~d~~~c~~~~~~~------------------~~~~N~~L~ 238 (361)
+.+.|++|.+.|.++++++-|-| .+...... ...+.+.+. -..|.+.+.
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyP-----qyS~sTt~--------s~~~~~~~al~~~~~~~~i~~I~~~~~~p~yI~a~a 170 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYP-----QYSSSTTG--------SYVDELARALKELRGQPKISTIPDYYDEPLYIEALA 170 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCc-----ccccccHH--------HHHHHHHHHHHhcCCCCceEEecCccCChHHHHHHH
Confidence 44667888899999999986644 22211000 000000000 125556666
Q ss_pred HHHHHHHhcCC-CceEEEeccchHHHHHHhC
Q 018055 239 EALAQTRRNLP-NASLICVDTHSVLLELFQN 268 (361)
Q Consensus 239 ~~l~~l~~~~p-~~~i~~~D~~~~~~~ii~n 268 (361)
+.+++--+++| +-..++|..|++=...++.
T Consensus 171 ~~I~~~~~~~~~~~~~llfSaHglP~~~~~~ 201 (320)
T COG0276 171 DSIREKLAKHPRDDDVLLFSAHGLPKRYIDE 201 (320)
T ss_pred HHHHHHHHhcCCCCeEEEEecCCCchhhhhc
Confidence 66655445554 4567778888876666554
No 73
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=22.50 E-value=3.8e+02 Score=25.24 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhcCCCceEEEeccchHHHHHHhCCCCCCCCCC
Q 018055 236 MLKEALAQTRRNLPNASLICVDTHSVLLELFQNPTSHGLKYG 277 (361)
Q Consensus 236 ~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~n~ 277 (361)
.|.+.++.+.++-+|+.|...-+ +||++||-.+.
T Consensus 114 ~l~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e~ 147 (286)
T COG1209 114 GLSELLEHFAEEGSGATILLYEV--------DDPSRYGVVEF 147 (286)
T ss_pred ChHHHHHHHhccCCCcEEEEEEc--------CCcccceEEEE
Confidence 67777777777777877776654 49999996443
No 74
>PF09125 COX2-transmemb: Cytochrome C oxidase subunit II, transmembrane; InterPro: IPR015209 This N-terminal domain forms the transmembrane region in subunit II of cytochrome c oxidase from Thermus thermophilus. This domain adopts a tertiary structure consisting of two antiparallel transmembrane helices, in a transmembrane helix hairpin fold []. ; PDB: 1EHK_B 2QPE_B 3S8F_B 4EV3_B 3BVD_B 3S8G_B 3EH3_B 3S3C_B 3S39_B 3QJQ_B ....
Probab=21.57 E-value=1.7e+02 Score=18.53 Aligned_cols=21 Identities=5% Similarity=-0.026 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 018055 7 QKIFVSFGKFITLGVVMMAML 27 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~ 27 (361)
|+|+.-.+.++++++++++-.
T Consensus 14 r~Wi~F~l~mi~vFi~li~yt 34 (38)
T PF09125_consen 14 RGWIAFALAMILVFIALIGYT 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHH
Confidence 677776666777777777544
No 75
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=21.08 E-value=2.1e+02 Score=22.88 Aligned_cols=25 Identities=12% Similarity=0.125 Sum_probs=21.9
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHhcC
Q 018055 224 ISYNNAVLDYNNMLKEALAQTRRNL 248 (361)
Q Consensus 224 ~~~~~~~~~~N~~L~~~l~~l~~~~ 248 (361)
++....+..||+.|...|.++.+++
T Consensus 57 ~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 57 EQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4667789999999999999999874
No 76
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=20.94 E-value=2.7e+02 Score=22.93 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=16.0
Q ss_pred HHHHHHHHHHcCCcEEEEc
Q 018055 177 IAGTVEELYALGGRTFLVL 195 (361)
Q Consensus 177 i~~~v~~L~~~GAr~~lv~ 195 (361)
+.+.+++|.+.|+|+|+|+
T Consensus 79 ~~~~l~~l~~~G~~~i~v~ 97 (135)
T cd00419 79 TDDALEELAKEGVKNVVVV 97 (135)
T ss_pred HHHHHHHHHHcCCCeEEEE
Confidence 4556788899999999997
No 77
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=20.72 E-value=42 Score=29.65 Aligned_cols=17 Identities=41% Similarity=0.520 Sum_probs=13.9
Q ss_pred CccEEEEcCCcccccCC
Q 018055 36 EFEAIFNFGDSNSDTGG 52 (361)
Q Consensus 36 ~~~~l~vFGDSlsD~Gn 52 (361)
+...+++||||.+|..=
T Consensus 201 ~~~~~~~~GD~~ND~~M 217 (254)
T PF08282_consen 201 SPEDIIAFGDSENDIEM 217 (254)
T ss_dssp SGGGEEEEESSGGGHHH
T ss_pred ccceeEEeecccccHhH
Confidence 35789999999999754
No 78
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=20.33 E-value=1.1e+02 Score=26.00 Aligned_cols=23 Identities=43% Similarity=0.502 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEcccCC
Q 018055 177 IAGTVEELYALGGRTFLVLNLAP 199 (361)
Q Consensus 177 i~~~v~~L~~~GAr~~lv~nlpp 199 (361)
+.+.|++|.+.|+++++++.+-|
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~P 123 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLYP 123 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECCc
Confidence 56778899999999999986644
Done!