Query 018064
Match_columns 361
No_of_seqs 119 out of 1111
Neff 9.2
Searched_HMMs 13730
Date Mon Mar 25 09:22:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018064.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018064hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wpga4 f.33.1.1 (A:1-124,A:24 37.3 33 0.0024 30.0 7.0 20 276-295 419-438 (472)
2 d2a65a1 f.54.1.1 (A:5-513) Na( 21.9 2.3E+02 0.017 24.3 30.8 50 13-63 70-119 (509)
3 d1rh5b_ f.23.28.1 (B:) Preprot 12.6 35 0.0025 20.3 1.0 30 172-205 16-45 (56)
4 d1zy3a1 f.1.4.1 (A:1-170) Apop 9.3 55 0.004 24.1 1.5 23 8-30 70-94 (170)
5 d1r3jc_ f.14.1.1 (C:) Potassiu 8.5 1.4E+02 0.01 19.4 3.4 30 226-255 66-95 (103)
6 d1pq1a_ f.1.4.1 (A:) Apoptosis 7.0 90 0.0065 23.6 1.8 23 8-30 115-139 (196)
7 d1g5ma_ f.1.4.1 (A:) Bcl-2 {Hu 6.5 73 0.0053 23.3 1.0 20 11-30 82-103 (164)
8 d1k3ka_ f.1.4.1 (A:) Bcl-2 hom 6.2 56 0.0041 23.5 0.1 23 11-34 64-89 (146)
9 d1q90r_ f.23.12.1 (R:) ISP sub 5.9 2.3E+02 0.017 15.0 2.7 19 295-313 18-36 (39)
10 d1sfea1 a.4.2.1 (A:93-176) Ada 5.6 1.1E+02 0.0077 19.6 1.3 21 9-29 16-36 (84)
No 1
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=37.28 E-value=33 Score=30.03 Aligned_cols=20 Identities=10% Similarity=0.002 Sum_probs=12.1
Q ss_pred HHHHHHHhhcCchhhHHHHh
Q 018064 276 ASTMFIGITFPFFGGLLGFF 295 (361)
Q Consensus 276 ~~~~~iA~~vp~~~~v~~l~ 295 (361)
.+..++...+|.++.+++..
T Consensus 419 ~~l~~~i~yiP~l~~vf~~~ 438 (472)
T d1wpga4 419 MSLHFLILYVDPLPMIFKLK 438 (472)
T ss_dssp HHHHHHHHHSTTTHHHHTCC
T ss_pred HHHHHHHHHhhHHHHHHccc
Confidence 33344445688888776653
No 2
>d2a65a1 f.54.1.1 (A:5-513) Na(+):neurotransmitter symporter homologue LeuT {Aquifex aeolicus [TaxId: 63363]}
Probab=21.90 E-value=2.3e+02 Score=24.30 Aligned_cols=50 Identities=14% Similarity=0.090 Sum_probs=31.4
Q ss_pred cccHHHHHHHhcCccccccchhhhHHHHhhhhHHHHHHHhhcchHHHHHhh
Q 018064 13 FDRYHELGQHAFGEKLGLYIVVPQQLIVEVGVCIVYMVTGGKSLHKVHELL 63 (361)
Q Consensus 13 ~~sy~~l~~~~~G~~~g~~~v~~~~~~~~~g~~v~y~i~~~~~l~~~~~~~ 63 (361)
...+..++....+++.. ..+........+..++-|.+..+..+.......
T Consensus 70 i~~~~~i~~~~~~~~~~-~giG~~~~~~~~~i~~yy~vi~~w~l~Y~~~s~ 119 (509)
T d2a65a1 70 HGTTPAIFYLLWRNRFA-KILGVFGLWIPLVVAIYYVYIESWTLGFAIKFL 119 (509)
T ss_dssp CCSHHHHHHHHSCSHHH-HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhccCcch-hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566666666554333 345556666777777888888887776655443
No 3
>d1rh5b_ f.23.28.1 (B:) Preprotein translocase SecE subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=12.61 E-value=35 Score=20.26 Aligned_cols=30 Identities=30% Similarity=0.401 Sum_probs=17.9
Q ss_pred CCCCCccCcchhhhHHHHHHHHHHhHhhHHHhhc
Q 018064 172 EKPSKGPMWRGVVVAYIVVALCYFPVALIGYWMF 205 (361)
Q Consensus 172 ~~p~~~~~~~~~~~a~~~~~~~Y~~~g~~gy~~f 205 (361)
++|++.-++++.. ++.+-..++|..||..+
T Consensus 16 ~KP~~~Ef~~ia~----v~~iG~~i~G~IGf~I~ 45 (56)
T d1rh5b_ 16 KKPTKDEYLAVAK----VTALGISLLGIIGYIIH 45 (56)
T ss_dssp ECCCHHHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHH----HHHHHHHHHHHHHHHHH
Confidence 5677765545333 34444667777777654
No 4
>d1zy3a1 f.1.4.1 (A:1-170) Apoptosis regulator Bcl-w {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.32 E-value=55 Score=24.15 Aligned_cols=23 Identities=26% Similarity=0.625 Sum_probs=16.3
Q ss_pred CCCcccccHHHHHHHhc--Cccccc
Q 018064 8 VPGKRFDRYHELGQHAF--GEKLGL 30 (361)
Q Consensus 8 ~~~~~~~sy~~l~~~~~--G~~~g~ 30 (361)
.+.+....|.++++..| |..|||
T Consensus 70 ~~~~~~~~f~~Va~elF~dginWGR 94 (170)
T d1zy3a1 70 TPGSAQQRFTQVSDELFQGGPNWGR 94 (170)
T ss_dssp SCCCSHHHHHHHHHHHHTTCCCHHH
T ss_pred CCccHHHHHHHHHHHHhcCCCcHHH
Confidence 34445568899999988 566774
No 5
>d1r3jc_ f.14.1.1 (C:) Potassium channel protein {Streptomyces coelicolor [TaxId: 1902]}
Probab=8.54 E-value=1.4e+02 Score=19.38 Aligned_cols=30 Identities=7% Similarity=0.113 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHh
Q 018064 226 MANFFVVVHVIGSYQIYAMPVFDMIETLLV 255 (361)
Q Consensus 226 ~~~~~~~i~~~~s~pl~~~p~~~~~~~~~~ 255 (361)
.+|+...+..+.+..+...+.....+....
T Consensus 66 ~gr~~~~~~~~~Gi~~~~~~~~~i~~~~~~ 95 (103)
T d1r3jc_ 66 WGRCVAVVVMVAGITSFGLVTAALATWFVG 95 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555444444444444433
No 6
>d1pq1a_ f.1.4.1 (A:) Apoptosis regulator Bcl-xL {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.97 E-value=90 Score=23.56 Aligned_cols=23 Identities=22% Similarity=0.599 Sum_probs=17.0
Q ss_pred CCCcccccHHHHHHHhc--Cccccc
Q 018064 8 VPGKRFDRYHELGQHAF--GEKLGL 30 (361)
Q Consensus 8 ~~~~~~~sy~~l~~~~~--G~~~g~ 30 (361)
.+.+...+|.++++..| |-.|||
T Consensus 115 t~~~a~~~F~~V~~elF~dginWGR 139 (196)
T d1pq1a_ 115 TPGTAYQSFEQVVNELFRDGVNWGR 139 (196)
T ss_dssp CTTTHHHHHHHHHHHHTTTCCCHHH
T ss_pred CCccHHHHHHHHHHHHhcCCCCHHH
Confidence 34455568999999999 666884
No 7
>d1g5ma_ f.1.4.1 (A:) Bcl-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.54 E-value=73 Score=23.30 Aligned_cols=20 Identities=20% Similarity=0.350 Sum_probs=15.1
Q ss_pred cccccHHHHHHHhc--Cccccc
Q 018064 11 KRFDRYHELGQHAF--GEKLGL 30 (361)
Q Consensus 11 ~~~~sy~~l~~~~~--G~~~g~ 30 (361)
+....|.++++..| |..|||
T Consensus 82 ~~~~~f~~Va~elF~dginWGR 103 (164)
T d1g5ma_ 82 TARGRFATVVEELFRDGVNWGR 103 (164)
T ss_dssp HHHHHHHHHHHHHTTSCCCHHH
T ss_pred hHHHHHHHHHHHHhccCCCHHH
Confidence 33457999999999 666884
No 8
>d1k3ka_ f.1.4.1 (A:) Bcl-2 homolog {Kaposi's sarcoma-associated herpesvirus [TaxId: 37296]}
Probab=6.24 E-value=56 Score=23.50 Aligned_cols=23 Identities=13% Similarity=0.096 Sum_probs=16.1
Q ss_pred cccccHHHHHHHhc--Cc-cccccchh
Q 018064 11 KRFDRYHELGQHAF--GE-KLGLYIVV 34 (361)
Q Consensus 11 ~~~~sy~~l~~~~~--G~-~~g~~~v~ 34 (361)
+...++.+.+...| |. .||| ++.
T Consensus 64 ~~~~~f~~V~~elF~DG~~NWGR-IVa 89 (146)
T d1k3ka_ 64 TGIDQLGLSMLQVSGDGNMNWGR-ALA 89 (146)
T ss_dssp HHHHHHHTHHHHHCSSCSCCHHH-HHH
T ss_pred HHHHHHHHHHHHHHcCCCCCHHH-HHH
Confidence 44457889999999 64 5884 443
No 9
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=5.85 E-value=2.3e+02 Score=15.03 Aligned_cols=19 Identities=26% Similarity=0.242 Sum_probs=13.1
Q ss_pred hhhhhhhHHHHHHHHHHHH
Q 018064 295 FGGFAFAPTTYFLPCIIWL 313 (361)
Q Consensus 295 ~Ga~~~~~~~filP~l~~~ 313 (361)
.|+.+........|...|.
T Consensus 18 ~G~~~~~~~g~l~py~~fF 36 (39)
T d1q90r_ 18 AGGAGLPITTLALGYGAFF 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HhccchhhhhhccceeEEe
Confidence 3777777777777766553
No 10
>d1sfea1 a.4.2.1 (A:93-176) Ada DNA repair protein {Escherichia coli [TaxId: 562]}
Probab=5.63 E-value=1.1e+02 Score=19.56 Aligned_cols=21 Identities=19% Similarity=0.094 Sum_probs=14.1
Q ss_pred CCcccccHHHHHHHhcCcccc
Q 018064 9 PGKRFDRYHELGQHAFGEKLG 29 (361)
Q Consensus 9 ~~~~~~sy~~l~~~~~G~~~g 29 (361)
+.-+..||.|+|+.+--++..
T Consensus 16 p~G~v~TYg~iA~~~g~~~a~ 36 (84)
T d1sfea1 16 PCGETVSYQQLANAIGKPKAV 36 (84)
T ss_dssp CTTCCEEHHHHHHHTTCTTCH
T ss_pred CCCCeeeHHHHHHHhCCcccH
Confidence 333456999999988655433
Done!