Query 018069
Match_columns 361
No_of_seqs 177 out of 2050
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 05:52:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018069.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018069hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 3.8E-38 8.1E-43 291.8 32.5 319 4-327 10-333 (358)
2 PRK11272 putative DMT superfam 100.0 4.6E-33 9.9E-38 253.8 29.8 286 1-325 1-288 (292)
3 PRK11453 O-acetylserine/cystei 100.0 1.6E-32 3.4E-37 251.1 29.4 279 9-325 6-290 (299)
4 PRK11689 aromatic amino acid e 100.0 3.1E-32 6.7E-37 248.6 25.7 285 5-325 2-290 (295)
5 PRK10532 threonine and homoser 100.0 2.6E-31 5.6E-36 242.3 28.0 277 4-326 9-285 (293)
6 TIGR00950 2A78 Carboxylate/Ami 100.0 3.7E-31 8E-36 237.7 26.2 258 19-317 1-259 (260)
7 PRK15430 putative chlorampheni 100.0 4.9E-31 1.1E-35 240.8 26.3 277 4-322 5-285 (296)
8 TIGR00817 tpt Tpt phosphate/ph 100.0 2.4E-29 5.1E-34 230.7 27.1 278 14-325 9-296 (302)
9 TIGR03340 phn_DUF6 phosphonate 100.0 5.6E-28 1.2E-32 219.2 26.7 273 9-319 3-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 2.3E-27 5E-32 215.4 28.6 298 6-328 12-311 (334)
11 PTZ00343 triose or hexose phos 100.0 9E-27 2E-31 216.8 28.5 284 5-323 47-349 (350)
12 TIGR00688 rarD rarD protein. T 100.0 3.7E-26 8.1E-31 204.6 24.1 248 7-297 2-255 (256)
13 COG0697 RhaT Permeases of the 99.9 5.4E-24 1.2E-28 193.9 29.6 286 1-323 1-288 (292)
14 COG5006 rhtA Threonine/homoser 99.9 3.7E-23 8E-28 174.2 23.8 275 8-327 13-287 (292)
15 COG2962 RarD Predicted permeas 99.9 1.4E-22 3E-27 175.4 26.4 283 1-325 1-286 (293)
16 KOG4510 Permease of the drug/m 99.9 5E-26 1.1E-30 192.6 2.2 292 5-324 36-327 (346)
17 TIGR00776 RhaT RhaT L-rhamnose 99.9 3.6E-21 7.7E-26 174.8 22.6 273 8-322 2-288 (290)
18 PF08449 UAA: UAA transporter 99.9 8.9E-19 1.9E-23 160.5 27.4 266 36-327 32-302 (303)
19 KOG2765 Predicted membrane pro 99.8 5.1E-19 1.1E-23 157.3 17.5 301 2-326 9-394 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 1.2E-18 2.5E-23 156.6 11.0 273 23-329 33-314 (316)
21 KOG2766 Predicted membrane pro 99.7 1.7E-17 3.7E-22 140.1 4.3 257 35-326 47-303 (336)
22 KOG2234 Predicted UDP-galactos 99.7 1.2E-13 2.6E-18 123.5 27.7 297 7-325 15-325 (345)
23 COG2510 Predicted membrane pro 99.6 2.8E-15 6.1E-20 113.6 10.8 135 7-149 3-138 (140)
24 PF04142 Nuc_sug_transp: Nucle 99.6 3.2E-14 6.9E-19 125.3 18.6 230 67-312 13-243 (244)
25 KOG1580 UDP-galactose transpor 99.6 7.8E-14 1.7E-18 116.7 18.1 256 38-322 55-313 (337)
26 KOG1581 UDP-galactose transpor 99.6 7.1E-14 1.5E-18 121.6 16.9 265 35-326 50-317 (327)
27 KOG1444 Nucleotide-sugar trans 99.6 1.6E-12 3.4E-17 114.7 24.8 291 6-330 11-308 (314)
28 COG2510 Predicted membrane pro 99.6 5E-14 1.1E-18 106.8 13.0 135 184-321 4-138 (140)
29 KOG1443 Predicted integral mem 99.6 6.5E-13 1.4E-17 115.6 21.1 253 36-321 45-314 (349)
30 PF00892 EamA: EamA-like trans 99.5 3.2E-14 7E-19 112.7 8.6 125 17-149 1-125 (126)
31 KOG3912 Predicted integral mem 99.5 4E-13 8.7E-18 115.3 15.3 277 20-321 16-333 (372)
32 PF00892 EamA: EamA-like trans 99.5 3.1E-13 6.6E-18 107.0 9.5 125 193-321 1-125 (126)
33 KOG1442 GDP-fucose transporter 99.3 2.1E-12 4.5E-17 110.7 7.2 277 25-331 46-336 (347)
34 PF05653 Mg_trans_NIPA: Magnes 99.3 8.9E-11 1.9E-15 106.5 15.9 278 1-324 1-294 (300)
35 TIGR00950 2A78 Carboxylate/Ami 99.3 6.8E-11 1.5E-15 106.0 14.4 132 5-145 126-259 (260)
36 COG5070 VRG4 Nucleotide-sugar 99.3 5.2E-11 1.1E-15 99.2 11.9 277 22-328 21-302 (309)
37 KOG1583 UDP-N-acetylglucosamin 99.3 1.5E-10 3.2E-15 99.6 13.5 265 37-323 34-315 (330)
38 PF13536 EmrE: Multidrug resis 99.2 2.3E-11 5E-16 94.6 6.9 103 41-150 2-106 (113)
39 PF06800 Sugar_transport: Suga 99.2 7.4E-09 1.6E-13 91.1 22.7 251 35-319 11-268 (269)
40 PF03151 TPT: Triose-phosphate 99.2 2.9E-10 6.2E-15 93.4 13.0 138 184-322 1-153 (153)
41 KOG1582 UDP-galactose transpor 99.2 1.5E-09 3.3E-14 93.2 16.1 227 72-327 107-337 (367)
42 PRK15430 putative chlorampheni 99.1 1.3E-09 2.9E-14 99.6 14.6 138 180-321 5-144 (296)
43 PRK10532 threonine and homoser 99.1 2E-09 4.4E-14 98.2 15.7 136 6-151 147-282 (293)
44 PRK13499 rhamnose-proton sympo 99.1 1.3E-07 2.7E-12 86.7 26.1 302 1-323 1-342 (345)
45 TIGR03340 phn_DUF6 phosphonate 99.1 2.6E-09 5.6E-14 97.0 14.5 134 185-323 3-136 (281)
46 PRK11272 putative DMT superfam 99.1 3.6E-09 7.8E-14 96.6 14.5 137 6-150 149-285 (292)
47 KOG4314 Predicted carbohydrate 99.1 8.9E-10 1.9E-14 90.2 9.1 212 83-324 64-278 (290)
48 TIGR00688 rarD rarD protein. T 99.0 4E-09 8.8E-14 94.4 13.6 136 183-321 2-141 (256)
49 PLN00411 nodulin MtN21 family 99.0 1.3E-08 2.7E-13 95.0 15.4 135 7-150 189-328 (358)
50 TIGR00803 nst UDP-galactose tr 98.9 7.5E-09 1.6E-13 90.6 11.1 204 97-319 3-221 (222)
51 PRK11689 aromatic amino acid e 98.9 1.9E-08 4.1E-13 92.0 14.0 133 6-150 155-287 (295)
52 PRK02971 4-amino-4-deoxy-L-ara 98.9 2.2E-08 4.7E-13 79.1 12.1 122 183-325 2-125 (129)
53 KOG2922 Uncharacterized conser 98.9 1.3E-09 2.8E-14 96.3 3.9 277 1-323 15-307 (335)
54 PRK11453 O-acetylserine/cystei 98.9 9E-08 2E-12 87.7 15.4 137 6-149 142-286 (299)
55 TIGR00817 tpt Tpt phosphate/ph 98.8 5.8E-08 1.3E-12 89.1 12.8 139 6-150 144-293 (302)
56 PF13536 EmrE: Multidrug resis 98.8 5.4E-08 1.2E-12 75.6 9.4 107 218-325 3-109 (113)
57 PF03151 TPT: Triose-phosphate 98.6 8.5E-07 1.8E-11 72.7 12.9 133 8-147 1-150 (153)
58 PTZ00343 triose or hexose phos 98.6 1.6E-06 3.4E-11 81.1 14.8 138 6-149 193-347 (350)
59 COG2962 RarD Predicted permeas 98.6 1E-06 2.2E-11 77.3 12.1 140 182-324 6-146 (293)
60 PRK15051 4-amino-4-deoxy-L-ara 98.6 1.1E-06 2.5E-11 67.6 11.1 69 75-149 40-108 (111)
61 COG0697 RhaT Permeases of the 98.6 2E-06 4.3E-11 78.0 14.8 133 6-149 153-286 (292)
62 TIGR00776 RhaT RhaT L-rhamnose 98.5 1.6E-06 3.5E-11 78.9 12.9 128 6-149 151-287 (290)
63 COG4975 GlcU Putative glucose 98.5 5.4E-08 1.2E-12 82.8 2.2 278 7-321 2-284 (288)
64 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.5E-06 3.2E-11 67.0 9.1 67 255-321 42-108 (111)
65 PRK02971 4-amino-4-deoxy-L-ara 98.4 7.6E-06 1.6E-10 64.6 11.6 118 7-149 2-121 (129)
66 COG5006 rhtA Threonine/homoser 98.3 1.4E-05 3.1E-10 68.6 11.5 135 6-149 147-281 (292)
67 PF06027 DUF914: Eukaryotic pr 98.2 4.2E-05 9.2E-10 70.3 13.9 145 180-326 10-155 (334)
68 PF04657 DUF606: Protein of un 98.0 0.00015 3.2E-09 58.1 11.7 132 184-319 2-138 (138)
69 PRK10452 multidrug efflux syst 98.0 3.3E-05 7.2E-10 59.9 7.3 68 257-324 37-105 (120)
70 PF08449 UAA: UAA transporter 98.0 0.00013 2.8E-09 66.9 12.6 130 193-328 10-142 (303)
71 PF05653 Mg_trans_NIPA: Magnes 97.8 7.6E-05 1.6E-09 68.0 8.8 119 179-322 3-122 (300)
72 PF06379 RhaT: L-rhamnose-prot 97.8 0.016 3.4E-07 52.8 21.7 303 1-323 1-341 (344)
73 PRK09541 emrE multidrug efflux 97.7 0.00019 4.2E-09 54.9 7.8 65 259-323 39-104 (110)
74 PF06800 Sugar_transport: Suga 97.7 0.00051 1.1E-08 60.9 11.0 116 4-127 135-250 (269)
75 KOG4510 Permease of the drug/m 97.7 1.2E-05 2.5E-10 69.6 0.4 137 180-324 35-171 (346)
76 PRK10650 multidrug efflux syst 97.5 0.0016 3.4E-08 49.6 10.5 62 81-148 44-106 (109)
77 PF10639 UPF0546: Uncharacteri 97.5 0.0003 6.6E-09 53.6 6.0 110 13-148 2-112 (113)
78 COG3238 Uncharacterized protei 97.5 0.0024 5.3E-08 51.2 11.2 138 182-322 4-146 (150)
79 PRK10650 multidrug efflux syst 97.4 0.0022 4.8E-08 48.8 10.1 63 259-321 44-107 (109)
80 COG2076 EmrE Membrane transpor 97.4 0.00063 1.4E-08 51.0 6.8 65 259-323 39-104 (106)
81 PRK10452 multidrug efflux syst 97.4 0.00054 1.2E-08 53.1 6.5 67 78-150 36-103 (120)
82 PF04657 DUF606: Protein of un 97.4 0.0027 5.8E-08 50.9 10.4 130 9-147 3-138 (138)
83 PRK09541 emrE multidrug efflux 97.4 0.00076 1.6E-08 51.6 6.9 67 78-150 36-103 (110)
84 PRK11431 multidrug efflux syst 97.4 0.00083 1.8E-08 50.9 7.0 64 259-322 38-102 (105)
85 PRK13499 rhamnose-proton sympo 97.4 0.0024 5.2E-08 58.9 11.3 137 180-322 4-153 (345)
86 COG2076 EmrE Membrane transpor 97.3 0.00075 1.6E-08 50.6 6.2 63 81-149 39-102 (106)
87 PRK11431 multidrug efflux syst 97.2 0.0013 2.9E-08 49.8 6.9 65 79-149 36-101 (105)
88 KOG1441 Glucose-6-phosphate/ph 97.2 0.001 2.2E-08 60.6 7.3 137 5-149 161-306 (316)
89 KOG2765 Predicted membrane pro 97.1 0.0042 9.2E-08 56.7 9.5 141 4-150 244-390 (416)
90 PF04142 Nuc_sug_transp: Nucle 97.0 0.0016 3.6E-08 57.5 6.7 80 247-327 15-94 (244)
91 PF00893 Multi_Drug_Res: Small 97.0 0.0041 8.8E-08 46.2 7.7 55 259-313 38-93 (93)
92 PF00893 Multi_Drug_Res: Small 96.7 0.013 2.7E-07 43.6 7.8 54 81-140 38-92 (93)
93 PF07857 DUF1632: CEO family ( 96.5 0.02 4.3E-07 50.6 9.5 189 8-208 1-208 (254)
94 COG4975 GlcU Putative glucose 96.5 0.003 6.5E-08 54.4 3.9 133 183-325 2-139 (288)
95 KOG2234 Predicted UDP-galactos 96.1 0.32 7E-06 44.6 15.0 142 183-325 15-167 (345)
96 PF07857 DUF1632: CEO family ( 96.1 0.01 2.2E-07 52.4 5.1 132 184-327 1-139 (254)
97 TIGR00803 nst UDP-galactose tr 95.8 0.03 6.6E-07 48.8 7.1 58 83-146 163-220 (222)
98 PF10639 UPF0546: Uncharacteri 95.7 0.038 8.3E-07 42.2 6.3 108 190-319 3-111 (113)
99 KOG2922 Uncharacterized conser 95.7 0.0049 1.1E-07 55.3 1.5 123 178-324 16-138 (335)
100 KOG1581 UDP-galactose transpor 95.3 0.16 3.5E-06 45.4 9.6 137 5-149 170-312 (327)
101 COG3238 Uncharacterized protei 95.3 0.29 6.3E-06 39.4 10.2 140 5-148 3-144 (150)
102 KOG1444 Nucleotide-sugar trans 94.1 0.71 1.5E-05 41.7 10.7 137 6-149 156-299 (314)
103 KOG4831 Unnamed protein [Funct 93.9 0.18 4E-06 37.4 5.5 116 10-149 6-124 (125)
104 PF06379 RhaT: L-rhamnose-prot 93.3 0.85 1.8E-05 41.8 9.9 141 180-323 4-154 (344)
105 KOG1580 UDP-galactose transpor 92.5 0.36 7.8E-06 41.6 6.0 75 69-150 239-313 (337)
106 KOG4314 Predicted carbohydrate 91.8 0.079 1.7E-06 44.2 1.2 63 262-324 65-127 (290)
107 COG5070 VRG4 Nucleotide-sugar 90.2 1.6 3.4E-05 37.5 7.4 135 8-149 156-295 (309)
108 PRK02237 hypothetical protein; 87.3 2.9 6.4E-05 31.4 6.4 46 279-324 62-107 (109)
109 KOG2766 Predicted membrane pro 86.5 0.065 1.4E-06 46.6 -3.1 140 179-326 14-154 (336)
110 KOG1443 Predicted integral mem 85.4 4.3 9.3E-05 36.7 7.5 117 207-324 40-158 (349)
111 PF02694 UPF0060: Uncharacteri 83.5 1.8 3.9E-05 32.5 3.7 45 280-324 61-105 (107)
112 KOG1442 GDP-fucose transporter 82.4 2.9 6.3E-05 37.1 5.1 141 6-153 184-330 (347)
113 PF07168 Ureide_permease: Urei 81.8 1.4 3E-05 39.6 3.1 132 189-323 2-147 (336)
114 KOG3912 Predicted integral mem 80.1 2.2 4.7E-05 38.0 3.6 65 259-323 95-159 (372)
115 PF05297 Herpes_LMP1: Herpesvi 79.7 0.57 1.2E-05 41.4 0.0 50 92-146 43-93 (381)
116 KOG1582 UDP-galactose transpor 75.8 16 0.00035 32.6 7.7 110 34-150 218-332 (367)
117 PRK06638 NADH:ubiquinone oxido 74.4 54 0.0012 27.9 14.4 32 291-322 133-166 (198)
118 PF05977 MFS_3: Transmembrane 69.3 1.3E+02 0.0027 30.0 22.2 36 285-320 355-391 (524)
119 PF04342 DUF486: Protein of un 69.2 38 0.00081 25.5 7.2 33 108-146 72-104 (108)
120 PF03595 SLAC1: Voltage-depend 64.7 1.1E+02 0.0025 28.0 11.6 78 134-232 6-91 (330)
121 COG1742 Uncharacterized conser 63.9 18 0.0004 27.0 4.7 45 280-324 62-106 (109)
122 PF04342 DUF486: Protein of un 63.6 8.4 0.00018 28.9 2.9 30 291-320 77-106 (108)
123 PF07168 Ureide_permease: Urei 61.9 5.3 0.00012 36.1 1.9 130 12-147 1-143 (336)
124 KOG4831 Unnamed protein [Funct 61.0 29 0.00063 26.1 5.3 59 262-320 64-123 (125)
125 KOG1583 UDP-N-acetylglucosamin 59.8 1.3E+02 0.0029 27.1 10.2 132 7-149 164-313 (330)
126 COG4657 RnfA Predicted NADH:ub 58.8 62 0.0013 26.4 7.2 53 178-230 127-184 (193)
127 COG3169 Uncharacterized protei 53.2 38 0.00082 25.0 4.7 31 291-321 84-114 (116)
128 PRK02237 hypothetical protein; 52.9 22 0.00047 26.9 3.6 39 106-150 67-105 (109)
129 PF08507 COPI_assoc: COPI asso 52.8 23 0.0005 28.1 4.1 16 305-320 88-103 (136)
130 PLN00028 nitrate transmembrane 51.5 1.8E+02 0.004 28.2 11.0 15 307-321 417-431 (476)
131 PF15102 TMEM154: TMEM154 prot 51.3 12 0.00027 29.8 2.2 22 307-328 66-87 (146)
132 PF06570 DUF1129: Protein of u 50.3 1.6E+02 0.0035 25.1 11.2 16 85-100 159-174 (206)
133 KOG1623 Multitransmembrane pro 49.8 1.3E+02 0.0028 26.6 8.4 33 177-209 122-154 (243)
134 PF02694 UPF0060: Uncharacteri 47.0 24 0.00052 26.6 3.0 39 106-150 65-103 (107)
135 KOG1330 Sugar transporter/spin 44.3 1.1E+02 0.0024 29.9 7.7 56 178-233 283-340 (493)
136 TIGR02865 spore_II_E stage II 43.8 4.1E+02 0.0089 27.9 17.1 44 99-148 11-54 (764)
137 PF05961 Chordopox_A13L: Chord 40.9 22 0.00048 24.2 1.8 19 306-324 6-24 (68)
138 COG2271 UhpC Sugar phosphate p 40.3 3.5E+02 0.0077 26.2 11.0 129 191-330 73-213 (448)
139 COG0387 ChaA Ca2+/H+ antiporte 40.2 3.2E+02 0.007 25.7 14.5 21 301-321 162-182 (368)
140 PF15345 TMEM51: Transmembrane 38.2 23 0.00049 30.7 2.0 23 308-330 67-89 (233)
141 COG3086 RseC Positive regulato 38.1 20 0.00044 28.6 1.5 25 274-298 72-96 (150)
142 PF01102 Glycophorin_A: Glycop 36.4 29 0.00062 27.0 2.1 6 309-314 76-81 (122)
143 PF06570 DUF1129: Protein of u 35.8 2.8E+02 0.006 23.6 10.2 13 135-147 89-101 (206)
144 COG1742 Uncharacterized conser 33.7 2.1E+02 0.0045 21.6 6.6 39 106-150 66-104 (109)
145 COG3169 Uncharacterized protei 32.7 2.1E+02 0.0045 21.3 9.0 32 111-148 82-113 (116)
146 PF07444 Ycf66_N: Ycf66 protei 32.7 41 0.00089 24.3 2.3 28 301-328 4-31 (84)
147 PF15108 TMEM37: Voltage-depen 31.5 2.6E+02 0.0055 22.8 6.7 77 134-228 91-169 (184)
148 MTH00057 ND6 NADH dehydrogenas 31.3 3.2E+02 0.0069 23.0 13.1 32 291-322 132-165 (186)
149 PF10710 DUF2512: Protein of u 30.4 2.3E+02 0.0049 22.5 6.4 37 249-285 30-67 (136)
150 PF07698 7TM-7TMR_HD: 7TM rece 30.2 3.2E+02 0.007 22.7 18.6 33 199-232 118-150 (194)
151 PF15471 TMEM171: Transmembran 30.2 41 0.00089 29.8 2.3 22 304-325 161-182 (319)
152 PRK10489 enterobactin exporter 29.8 4.7E+02 0.01 24.5 12.8 17 306-322 382-398 (417)
153 PRK10473 multidrug efflux syst 29.6 4.6E+02 0.0099 24.3 23.5 14 110-123 168-181 (392)
154 PF04246 RseC_MucC: Positive r 28.6 25 0.00054 27.8 0.7 20 278-297 69-88 (135)
155 PF09656 PGPGW: Putative trans 27.4 1.8E+02 0.0039 18.9 4.9 45 134-208 5-49 (53)
156 PF10754 DUF2569: Protein of u 25.8 3.5E+02 0.0076 21.7 7.2 29 178-206 116-144 (149)
157 PF11044 TMEMspv1-c74-12: Plec 25.5 57 0.0012 20.1 1.7 18 302-319 2-19 (49)
158 PF06946 Phage_holin_5: Phage 24.9 2.9E+02 0.0062 20.4 6.4 54 268-321 22-79 (93)
159 PTZ00370 STEVOR; Provisional 24.3 1.3E+02 0.0028 27.1 4.4 35 25-60 246-280 (296)
160 PF06609 TRI12: Fungal trichot 24.0 7.8E+02 0.017 25.1 18.7 16 43-58 276-291 (599)
161 TIGR01167 LPXTG_anchor LPXTG-m 23.6 1.2E+02 0.0027 17.0 2.9 13 303-315 11-23 (34)
162 PF06168 DUF981: Protein of un 23.3 4.6E+02 0.01 22.2 13.9 108 34-149 4-113 (191)
163 KOG3817 Uncharacterized conser 23.3 5.1E+02 0.011 24.3 8.0 96 18-126 200-297 (452)
164 PRK12437 prolipoprotein diacyl 23.0 59 0.0013 29.2 2.1 23 302-324 235-257 (269)
165 PF09529 Intg_mem_TP0381: Inte 22.5 5E+02 0.011 22.3 14.9 58 84-150 53-111 (225)
166 COG4956 Integral membrane prot 22.1 5.8E+02 0.013 23.5 8.0 53 6-58 6-58 (356)
167 PRK10862 SoxR reducing system 21.6 42 0.00091 27.3 0.8 15 281-295 79-93 (154)
168 TIGR00905 2A0302 transporter, 20.8 7.7E+02 0.017 23.9 19.1 43 282-325 394-437 (473)
169 COG4854 Predicted membrane pro 20.8 2.3E+02 0.0051 21.6 4.4 18 133-150 73-90 (126)
170 TIGR01299 synapt_SV2 synaptic 20.8 9.9E+02 0.021 25.1 14.4 20 106-125 340-359 (742)
171 TIGR01647 ATPase-IIIA_H plasma 20.7 9.9E+02 0.022 25.1 12.0 114 34-148 625-752 (755)
172 PF11361 DUF3159: Protein of u 20.6 3.7E+02 0.0081 22.6 6.3 72 100-201 28-99 (187)
173 PF04550 Phage_holin_2: Phage 20.4 3.5E+02 0.0076 19.7 6.1 31 118-148 24-54 (89)
174 PF08693 SKG6: Transmembrane a 20.3 86 0.0019 19.1 1.7 18 308-325 21-38 (40)
175 TIGR01478 STEVOR variant surfa 20.2 1.4E+02 0.0031 26.8 3.8 33 27-60 252-284 (295)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=3.8e-38 Score=291.85 Aligned_cols=319 Identities=26% Similarity=0.528 Sum_probs=246.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHH
Q 018069 4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK-KDRPTLTYSFLLQFFLLGLVGI 82 (361)
Q Consensus 4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 82 (361)
|+.+.++.|++..++++...++.|.+.+.|++|+.+.++|+.++.++++++.++++| +.+++.+++++..+.+.|+++
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g- 88 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG- 88 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH-
Confidence 346799999999999999999999999999999999999999999999999877654 233445678888899999998
Q ss_pred HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC--
Q 018069 83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN-- 160 (361)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~-- 160 (361)
+.++.+++.|++|+++++++++.++.|+++.+++++++.|+.+.++|.++.+++|++++++|+.++...+++.....+
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~ 168 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP 168 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence 578889999999999999999999999999999999953333333334445999999999999998754442110000
Q ss_pred CCCcc-cchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCC-c
Q 018069 161 SASDQ-SQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERD-S 238 (361)
Q Consensus 161 ~~~~~-~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~ 238 (361)
+..+. +. .+ .......+...|+++++.++++||.|++.+|+..+++++....++++...+.+...+.....+.+ .
T Consensus 169 ~~~~~~~~-~~--~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~ 245 (358)
T PLN00411 169 PYLNFRQL-SP--PLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNP 245 (358)
T ss_pred cccccccc-cc--ccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 00000 00 00 00111234467999999999999999999999999987566667777777766666666654432 2
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069 239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY 318 (361)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~ 318 (361)
..+..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|++
T Consensus 246 ~~~~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~ 324 (358)
T PLN00411 246 SVWIIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY 324 (358)
T ss_pred ccceeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 22221122234557777775 56899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhcccccc
Q 018069 319 LVVLGKDEE 327 (361)
Q Consensus 319 l~~~~~~~~ 327 (361)
+..+.++++
T Consensus 325 l~~~~~~~~ 333 (358)
T PLN00411 325 AVMWGKANE 333 (358)
T ss_pred HHHhhhhhh
Confidence 988755444
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=253.79 Aligned_cols=286 Identities=16% Similarity=0.168 Sum_probs=236.0
Q ss_pred CCcchhHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHH
Q 018069 1 MVPERAKL-HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGL 79 (361)
Q Consensus 1 m~~~~~~g-~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 79 (361)
|+.|+..+ .+..++..++||.+++..|...++ ++|.+++++|+.++.++++++...++++ ..+++++......|.
T Consensus 1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~-~~p~~~~~~R~~~a~l~ll~~~~~~~~~---~~~~~~~~~~~~~g~ 76 (292)
T PRK11272 1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVES-WPPLMMAGVRFLIAGILLLAFLLLRGHP---LPTLRQWLNAALIGL 76 (292)
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhcc-CCHHHHHHHHHHHHHHHHHHHHHHhCCC---CCcHHHHHHHHHHHH
Confidence 66777654 456777889999999999999884 9999999999999999988887654322 234677777888888
Q ss_pred HHHHHhHHHHHhhc-cCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccC
Q 018069 80 VGITLNQGSYIFGL-DNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYR 158 (361)
Q Consensus 80 ~~~~~~~~~~~~al-~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~ 158 (361)
++...++.+++.+. ++++++.++++.++.|+++.+++.+ +|||++++ +++|+.++++|+.++.. +++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~~~---- 144 (292)
T PRK11272 77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-GGN---- 144 (292)
T ss_pred HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-Ccc----
Confidence 87667888899999 9999999999999999999999986 69999998 99999999999988752 110
Q ss_pred CCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCc
Q 018069 159 PNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDS 238 (361)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (361)
.+....|++++++++++||.|.+..||..++. +...+.++...+.+.+.+.....+.+.
T Consensus 145 -------------------~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (292)
T PRK11272 145 -------------------LSGNPWGAILILIASASWAFGSVWSSRLPLPV--GMMAGAAEMLAAGVVLLIASLLSGERL 203 (292)
T ss_pred -------------------cccchHHHHHHHHHHHHHHHHHHHHHhcCCCc--chHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 11234799999999999999999999975432 455667777788777777765433221
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069 239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY 318 (361)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~ 318 (361)
. ...+...|..+++.+++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|++
T Consensus 204 ~--~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~ 281 (292)
T PRK11272 204 T--ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVV 281 (292)
T ss_pred c--ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 1 11234678899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhcccc
Q 018069 319 LVVLGKD 325 (361)
Q Consensus 319 l~~~~~~ 325 (361)
+..+.++
T Consensus 282 ~~~~~~~ 288 (292)
T PRK11272 282 LVTLGKY 288 (292)
T ss_pred HHHHHHh
Confidence 8876443
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=251.12 Aligned_cols=279 Identities=16% Similarity=0.225 Sum_probs=217.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 018069 9 HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGS 88 (361)
Q Consensus 9 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 88 (361)
.++.++++++||.+++..|...++ ++|..+.++|+.++++.+.++.. + ++.+++ .....|++.....+.+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~~~~---~---~~~~~~---~~~~~g~~~~~~~~~~ 75 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIFFVA---R---PKVPLN---LLLGYGLTISFGQFAF 75 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHHHhc---C---CCCchH---HHHHHHHHHHHHHHHH
Confidence 466889999999999999999985 99999999999998877666542 1 112222 3444455544456667
Q ss_pred HHhhccC-CCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccc
Q 018069 89 YIFGLDN-TSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQ 167 (361)
Q Consensus 89 ~~~al~~-~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 167 (361)
++.++++ .+++.++++.++.|+++.+++++++|||++.+ ++++++++++|+.++.. ++ .
T Consensus 76 ~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~-~~-~------------ 135 (299)
T PRK11453 76 LFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE-DS-L------------ 135 (299)
T ss_pred HHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc-cc-C------------
Confidence 7889998 58899999999999999999999999999998 99999999999998862 21 0
Q ss_pred hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCCh--hHHHHHHHHHHHHHHHHHHHhhcCCcc---ccc
Q 018069 168 SQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPAR--LSVVSYSCFFSLMQFSAIGAYFERDSA---AWQ 242 (361)
Q Consensus 168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~ 242 (361)
+.......|+++++.++++|+.|.++.|+..++.+++ .....+....+.+.........+.+.. .+.
T Consensus 136 --------~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (299)
T PRK11453 136 --------NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLV 207 (299)
T ss_pred --------CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhc
Confidence 0112234799999999999999999999987655422 233444444444433333333333211 112
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069 243 FHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL 322 (361)
Q Consensus 243 ~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~ 322 (361)
..+...|..+++++++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||+++..+++|+++|++|+++..+
T Consensus 208 ~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 208 TIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 23456799999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred ccc
Q 018069 323 GKD 325 (361)
Q Consensus 323 ~~~ 325 (361)
.++
T Consensus 288 ~~~ 290 (299)
T PRK11453 288 GLR 290 (299)
T ss_pred chh
Confidence 554
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=3.1e-32 Score=248.58 Aligned_cols=285 Identities=12% Similarity=0.057 Sum_probs=215.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069 5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL 84 (361)
Q Consensus 5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 84 (361)
|.++++++++++++||.+++..|...++ ++|..+.++|+.++.++++++.. ++.. +++ .++....+.++...
T Consensus 2 ~~~~~l~~l~a~~~Wg~~~~~~k~~~~~-~~P~~~~~~R~~~a~l~l~~~~~---~~~~---~~~-~~~~~~~~~l~~~~ 73 (295)
T PRK11689 2 SQKATLIGLIAILLWSTMVGLIRGVSES-LGPVGGAAMIYSVSGLLLLLTVG---FPRL---RQF-PKRYLLAGGLLFVS 73 (295)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHcc-CChHHHHHHHHHHHHHHHHHHcc---cccc---ccc-cHHHHHHHhHHHHH
Confidence 5678899999999999999999999996 99999999999999998887631 1111 111 22234455555667
Q ss_pred hHHHHHhhccC----CCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069 85 NQGSYIFGLDN----TSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN 160 (361)
Q Consensus 85 ~~~~~~~al~~----~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 160 (361)
++.+++.++++ .++++++++.++.|+++.+++++++|||++++ +++|++++++|++++.. ++..... .
T Consensus 74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~~-~ 145 (295)
T PRK11689 74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLSL-A 145 (295)
T ss_pred HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccchh-h
Confidence 77777777754 67788899999999999999999999999997 99999999999999863 2110000 0
Q ss_pred CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 018069 161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA 240 (361)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (361)
+...+..+...|+++++.++++||.|.++.||..++.+ +..... ..+.+.+.+.... +++.
T Consensus 146 ------------~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~~---~~~~~~l~~~~~~-~~~~-- 206 (295)
T PRK11689 146 ------------ELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGKN-GITLFF---ILTALALWIKYFL-SPQP-- 206 (295)
T ss_pred ------------hhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCCC-chhHHH---HHHHHHHHHHHHH-hcCc--
Confidence 00001112346999999999999999999999876654 554322 2233333333332 2221
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHh
Q 018069 241 WQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLV 320 (361)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~ 320 (361)
....+...|..+++.++ ++.++|.+|++++|+.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++.
T Consensus 207 ~~~~~~~~~~~l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 207 AMVFSLPAIIKLLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred cccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 11233456777777775 78999999999999999999999999999999999999999999999999999999998888
Q ss_pred hcccc
Q 018069 321 VLGKD 325 (361)
Q Consensus 321 ~~~~~ 325 (361)
...++
T Consensus 286 ~~~~~ 290 (295)
T PRK11689 286 WLATR 290 (295)
T ss_pred hhhHh
Confidence 65443
No 5
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=2.6e-31 Score=242.29 Aligned_cols=277 Identities=13% Similarity=0.121 Sum_probs=221.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q 018069 4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGIT 83 (361)
Q Consensus 4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 83 (361)
++.+++.++++++++|+.++...|...++ ++|.++.++|++++.++++++...++ ++.++++++..+..|.+. .
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~~~~----~~~~~~~~~~~~~~g~~~-~ 82 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFKPWR----LRFAKEQRLPLLFYGVSL-G 82 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHhHHh----ccCCHHHHHHHHHHHHHH-H
Confidence 45789999999999999999999999996 99999999999999988887653221 134567777777888774 5
Q ss_pred HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 018069 84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSAS 163 (361)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 163 (361)
..+.++++++++++++.++++..+.|+++.+++. ||++ +..++.++++|+.++.. .+.
T Consensus 83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~~-~~~--------- 140 (293)
T PRK10532 83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLLP-LGQ--------- 140 (293)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheeee-cCC---------
Confidence 7788999999999999999999999999998863 4432 34567788999988752 211
Q ss_pred cccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 018069 164 DQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQF 243 (361)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (361)
+ .......|++++++++++|+.|.+..|+..++.+ +... .+....+.+.+.+.....+.+ ..
T Consensus 141 -----------~-~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~----~~ 202 (293)
T PRK10532 141 -----------D-VSHVDLTGAALALGAGACWAIYILSGQRAGAEHG-PATV-AIGSLIAALIFVPIGALQAGE----AL 202 (293)
T ss_pred -----------C-cccCChHHHHHHHHHHHHHHHHHHHHHHHhccCC-chHH-HHHHHHHHHHHHHHHHHccCc----cc
Confidence 0 1112347999999999999999999999877765 5555 455566666666666533221 11
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 244 HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
.+...|..++++|++++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|++|++...+.
T Consensus 203 ~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 203 WHWSILPLGLAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 23345666789999999999999999999999999999999999999999999999999999999999999999888766
Q ss_pred ccc
Q 018069 324 KDE 326 (361)
Q Consensus 324 ~~~ 326 (361)
.++
T Consensus 283 ~~~ 285 (293)
T PRK10532 283 IRR 285 (293)
T ss_pred CCC
Confidence 543
No 6
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=3.7e-31 Score=237.67 Aligned_cols=258 Identities=18% Similarity=0.236 Sum_probs=219.3
Q ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCc
Q 018069 19 YAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSP 98 (361)
Q Consensus 19 ~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~ 98 (361)
||.+++..|...+.+.++....+.|++.+.+++.++...+ .+++++.+....|.++..+++.+++.|++++++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~ 73 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPV 73 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 8999999999887668999999999999988888776432 234566778888888888999999999999999
Q ss_pred chhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCccc
Q 018069 99 IFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKE 178 (361)
Q Consensus 99 ~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (361)
++++++.++.|+++.+++++++|||++++ +++|+.++++|+.++.. ++ +.
T Consensus 74 ~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~~-~~-----------------------~~ 123 (260)
T TIGR00950 74 GEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLLS-DG-----------------------NL 123 (260)
T ss_pred hhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhcc-CC-----------------------cc
Confidence 99999999999999999999999999998 99999999999999852 22 11
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069 179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL 257 (361)
Q Consensus 179 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (361)
.....|+++++.++++|+.+.+..|+..++.+ ++.....+.+..+.+...+.....+++. . .+...|..+++.++
T Consensus 124 ~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~---~~~~~~~~~~~~~~ 199 (260)
T TIGR00950 124 SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-Q---ALSLQWGALLYLGL 199 (260)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-C---cchHHHHHHHHHHH
Confidence 23458999999999999999999999877664 2334555677888888887776533322 1 24456778899999
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHH
Q 018069 258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGL 317 (361)
Q Consensus 258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~ 317 (361)
+++.+++.++++++++.++.+++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus 200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999885
No 7
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=100.00 E-value=4.9e-31 Score=240.77 Aligned_cols=277 Identities=13% Similarity=0.081 Sum_probs=206.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCC--C-CCCHHHHHHHHHHHHH
Q 018069 4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR--P-TLTYSFLLQFFLLGLV 80 (361)
Q Consensus 4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~--~-~~~~~~~~~~~~~g~~ 80 (361)
++.+|.+++++++++||.+++..|.. ++ ++|.++.++|+.++.+++.++...+++... + ..+++.+. ....+.+
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIF-MLAVSAV 81 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHH-HHHHHHH
Confidence 56789999999999999999999985 53 999999999999999888777654321111 0 11233332 3346666
Q ss_pred HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069 81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN 160 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 160 (361)
+...++.++++|++++++++++++.++.|+++.+++++++|||++++ ++.|++++++|+.++...++
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~~~~~------- 148 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQLWTFG------- 148 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence 67789999999999999999999999999999999999999999998 99999999999999863111
Q ss_pred CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCcc
Q 018069 161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSA 239 (361)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (361)
+ . ..++++++++||.|.+..|+..++.. +....+.+....+.+...+.. .....
T Consensus 149 --------------~----~----~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 203 (296)
T PRK15430 149 --------------S----L----PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIA---DSSTS 203 (296)
T ss_pred --------------C----c----cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHHc---cCCcc
Confidence 0 0 14688899999999999888643221 122223333333333222111 11111
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069 240 AWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL 319 (361)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l 319 (361)
.+...+...+..+...++ .+.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+.+
T Consensus 204 ~~~~~~~~~~~~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v 282 (296)
T PRK15430 204 HMGQNPMSLNLLLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAI 282 (296)
T ss_pred cccCCcHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 111111122333444455 5789999999999999999999999999999999999999999999999999999988776
Q ss_pred hhc
Q 018069 320 VVL 322 (361)
Q Consensus 320 ~~~ 322 (361)
...
T Consensus 283 ~~~ 285 (296)
T PRK15430 283 FVM 285 (296)
T ss_pred HHH
Confidence 653
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=2.4e-29 Score=230.69 Aligned_cols=278 Identities=13% Similarity=0.115 Sum_probs=215.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhc
Q 018069 14 IFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGL 93 (361)
Q Consensus 14 ~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al 93 (361)
+-.++-....+..|.+.++--.|..++++|+.++.+.+.+... ...+++++.+++++++.+..|+++ +.+..+.+.++
T Consensus 9 ~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l 86 (302)
T TIGR00817 9 LWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSL 86 (302)
T ss_pred HHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3333334445688999985356999999999998877666522 112233456788999999999996 68889999999
Q ss_pred cCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhc
Q 018069 94 DNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLL 173 (361)
Q Consensus 94 ~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (361)
+|++++.++++.++.|+++++++++++|||++++ ++.|+.++++|+.+.. .+
T Consensus 87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~--~~-------------------- 138 (302)
T TIGR00817 87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS--DT-------------------- 138 (302)
T ss_pred HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc--CC--------------------
Confidence 9999999999999999999999999999999998 9999999999998653 11
Q ss_pred cCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhh--hCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccc---cc----c
Q 018069 174 GDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLK--KYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW---QF----H 244 (361)
Q Consensus 174 ~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~----~ 244 (361)
+......|++++++++++|++|.+..||..+ +. ++.....++...+.+.+.|.....++..... .. .
T Consensus 139 ---~~~~~~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~ 214 (302)
T TIGR00817 139 ---ELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGV 214 (302)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhccc
Confidence 1122347999999999999999999999887 55 4889999999999999999887655321111 00 0
Q ss_pred cc-hHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 245 SG-WEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 245 ~~-~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
.. ..+...+..++.+....+.+++.++++.+|++.++..+++|++++++|++++||+++..+++|+++++.|++++.+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~ 294 (302)
T TIGR00817 215 NVTKIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRV 294 (302)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 00 11211223332223333345668999999999999999999999999999999999999999999999999999865
Q ss_pred cc
Q 018069 324 KD 325 (361)
Q Consensus 324 ~~ 325 (361)
|.
T Consensus 295 k~ 296 (302)
T TIGR00817 295 KA 296 (302)
T ss_pred hc
Confidence 43
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.97 E-value=5.6e-28 Score=219.18 Aligned_cols=273 Identities=15% Similarity=0.160 Sum_probs=203.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhh-ccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069 9 HLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLE-KKDRPTLTYSFLLQFFLLGLVGITLNQG 87 (361)
Q Consensus 9 ~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (361)
.++.++++++|+..++..|...++ -++ ..++++....+.+.|+..++. ++.++..+++ ++.....+.++...++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK-EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPAT-FWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc-hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchh-hHHHHHHHHHHHHHHHH
Confidence 467889999999999999966654 334 357777777778888776542 2223333334 44445555555668999
Q ss_pred HHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccc
Q 018069 88 SYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQ 167 (361)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 167 (361)
+++.|+++.+++.++++.++.|+++.+++++++|||++++ +++|+.+++.|++++.. ++.
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~~------------- 138 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SRF------------- 138 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-ccc-------------
Confidence 9999999999999999999999999999999999999998 99999999999998863 210
Q ss_pred hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHH-HHHHHh---hcCCcccccc
Q 018069 168 SQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQF-SAIGAY---FERDSAAWQF 243 (361)
Q Consensus 168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~---~~~~~~~~~~ 243 (361)
......|+.+++.++++|+.|.+..|+..++.++......+ ...+.+.. .+.... .+.. ...
T Consensus 139 ----------~~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~- 204 (281)
T TIGR03340 139 ----------AQHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGY-LGIGFLAMGWPFLLLYLKRHGR--SMF- 204 (281)
T ss_pred ----------cccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHH-HHHHHHHHHHHHHHHHHHHhcc--chh-
Confidence 01123688899999999999999988765444311111111 11222111 222221 1111 111
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069 244 HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL 319 (361)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l 319 (361)
.....++.+++.+.+++.++|.+|++++++.++++++.+.+++|+++.+++++++||+++..+++|+++++.|+.+
T Consensus 205 ~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 205 PYARQILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 1223456677888888999999999999999999999999999999999999999999999999999999999875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=2.3e-27 Score=215.35 Aligned_cols=298 Identities=15% Similarity=0.185 Sum_probs=232.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHHhhcc-CCCCCCHHHHHHHHHHHHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVS-KLVFPLYRNIIAVIVLVPFAYFLEKK-DRPTLTYSFLLQFFLLGLVGIT 83 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 83 (361)
.+..++-=..+++-..+...+....+.|.+ |....++-++.-.++..++..++++. .+.+..+++|+++++++++-.
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv- 90 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDV- 90 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHH-
Confidence 345555555666667777777776666665 77788888877777777766665432 222333456677778888865
Q ss_pred HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 018069 84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSAS 163 (361)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 163 (361)
.++.+.+.|++|++.+.++++..+..+++.+++++++|||.++. +++|+++++.|+.++...+....++
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~~----- 159 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGSD----- 159 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeeccccccc-----
Confidence 88999999999999999999999999999999999999999997 9999999999999987533221111
Q ss_pred cccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 018069 164 DQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQF 243 (361)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 243 (361)
+....+..+|+++++.++++||+++++.++..++.+ ......+..+++.++..+.....|.+....-.
T Consensus 160 -----------~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~-~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~ 227 (334)
T PF06027_consen 160 -----------SSSGSNPILGDLLALLGAILYAVSNVLEEKLVKKAP-RVEFLGMLGLFGFIISGIQLAILERSGIESIH 227 (334)
T ss_pred -----------CCCCCccchhHHHHHHHHHHHHHHHHHHHHhcccCC-HHHHHHHHHHHHHHHHHHHHHheehhhhhccC
Confidence 224567789999999999999999999999999886 78889999999999999888877664322112
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 244 HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 244 ~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
.+...+..++. ..++.+.-|.+....++..+|+..++-..+..+++++++++++|+++++..++|.++|+.|.+++...
T Consensus 228 w~~~~~~~~v~-~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 228 WTSQVIGLLVG-YALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred CChhhHHHHHH-HHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 23233333332 33356777888888999999999999999999999999999999999999999999999999999876
Q ss_pred ccccc
Q 018069 324 KDEES 328 (361)
Q Consensus 324 ~~~~~ 328 (361)
+++.+
T Consensus 307 ~~~~~ 311 (334)
T PF06027_consen 307 ESPEE 311 (334)
T ss_pred CCccc
Confidence 65443
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=9e-27 Score=216.80 Aligned_cols=284 Identities=15% Similarity=0.168 Sum_probs=222.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHHhhccCCCCC--CHHHHHHHHHHHHHH
Q 018069 5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVS-KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTL--TYSFLLQFFLLGLVG 81 (361)
Q Consensus 5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~ 81 (361)
+.+..++.+..-.+-.......|..++. ++ |+.++++|++++.++...++... .+.+++. .+++++.++..|+++
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~gl~~ 124 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQGLCH 124 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHHHHH
Confidence 3455556666666666777889999996 99 99999999999988765554322 2222333 345778899999998
Q ss_pred HHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCC
Q 018069 82 ITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNS 161 (361)
Q Consensus 82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~ 161 (361)
... +...+.|+++++++.++++.++.|+++++++++++|||++++ ++.+++++++|+.+.+. +
T Consensus 125 ~~~-~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~-------- 187 (350)
T PTZ00343 125 LFV-HFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--K-------- 187 (350)
T ss_pred HHH-HHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--c--------
Confidence 754 555679999999999999999999999999999999999998 99999999999999862 1
Q ss_pred CCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC------ChhHHHHHHHHHHHHHHHHHHHhhc
Q 018069 162 ASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP------ARLSVVSYSCFFSLMQFSAIGAYFE 235 (361)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~ 235 (361)
+......|++++++++++++.+.++.|+..++.+ ++.....+....+.++++|+....|
T Consensus 188 ---------------~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e 252 (350)
T PTZ00343 188 ---------------ELHFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFE 252 (350)
T ss_pred ---------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1122357999999999999999999999887542 3445666668889999999887555
Q ss_pred CCc--cccc----cccchHHHHHHHHHHHHHHHHHHHHHH----HHhcCCceeeeccchhHHHHHHHHHHHHhcCccchh
Q 018069 236 RDS--AAWQ----FHSGWEIFCVFYSGLVASAMSFAVQIW----VIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG 305 (361)
Q Consensus 236 ~~~--~~~~----~~~~~~~~~l~~~~~~~~~~~~~l~~~----a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~ 305 (361)
... ..+. ......+..+++. ++.+.+++.+++. +++++++.+.+...+++|+++++++++++||++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~ 331 (350)
T PTZ00343 253 GKKWVPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL 331 (350)
T ss_pred hHHHHHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH
Confidence 321 1110 1111122334443 4567889999995 999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhcc
Q 018069 306 GVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 306 ~~iG~~lil~g~~l~~~~ 323 (361)
+++|+++++.|++++...
T Consensus 332 ~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 332 GYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHHHHHHHHHHHHHHhhc
Confidence 999999999999998754
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.95 E-value=3.7e-26 Score=204.58 Aligned_cols=248 Identities=11% Similarity=0.038 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhcc-----CCCCCCHHH-HHHHHHHHHH
Q 018069 7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK-----DRPTLTYSF-LLQFFLLGLV 80 (361)
Q Consensus 7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~-~~~~~~~g~~ 80 (361)
||++++++++++||.++++.|. .++ ++|.+++++|++++.+++.++...++++ ..++.++++ +......|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~-~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKP-LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hcc-CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 5899999999999999999998 454 9999999999999998877765443221 111112222 3345566665
Q ss_pred HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069 81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN 160 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 160 (361)
...++.++++|++++++++++++.++.|+++++++++++|||++++ +++++.++++|+.++...++
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHHHcC-------
Confidence 5589999999999999999999999999999999999999999998 99999999999998863111
Q ss_pred CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 018069 161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA 240 (361)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (361)
+ .. .+++.++++|+.|.+..|+..++ + ....... .........+... ..+....
T Consensus 146 --------------~----~~----~~~l~aa~~~a~~~i~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~-~~~~~~~ 199 (256)
T TIGR00688 146 --------------S----LP----WEALVLAFSFTAYGLIRKALKNT-D-LAGFCLE-TLSLMPVAIYYLL-QTDFATV 199 (256)
T ss_pred --------------C----ch----HHHHHHHHHHHHHHHHHhhcCCC-C-cchHHHH-HHHHHHHHHHHHH-HhccCcc
Confidence 1 01 35788999999999999986443 2 2222211 1111222221111 1111111
Q ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHH
Q 018069 241 WQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIA 297 (361)
Q Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~ 297 (361)
....+...|..+++.|++ +.++|.++++++|+.++++++++.+++|+++.+++.++
T Consensus 200 ~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 200 QQTNPFPIWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred cccCchhHHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 111122478888888876 88999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.94 E-value=5.4e-24 Score=193.87 Aligned_cols=286 Identities=20% Similarity=0.291 Sum_probs=219.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q 018069 1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLV 80 (361)
Q Consensus 1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 80 (361)
|+++...+..+.++..+.|+......|...+...++....+.|...+.+...+.....+...+ +..++ +++....+.+
T Consensus 1 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~ 78 (292)
T COG0697 1 MKRALLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLR-PALRP-WLLLLLLALL 78 (292)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhccccc-ccccc-hHHHHHHHHH
Confidence 345667788899999999999999999988742455555566998888874444432211111 22222 4556677777
Q ss_pred HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHH-HhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCC
Q 018069 81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAV-LLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRP 159 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~-~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~ 159 (361)
+...++.+++.++++++++.++++.++.|+++.++++ +++|||++++ ++.++.++++|++++.. .+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~-~~~~~--- 148 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILL-GGGGG--- 148 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheec-CCCcc---
Confidence 7778999999999999999999999999999999997 7779999998 99999999999999963 22110
Q ss_pred CCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHH-HHHHHHHHHHHHHHHhhcCCc
Q 018069 160 NSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVS-YSCFFSLMQFSAIGAYFERDS 238 (361)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~ 238 (361)
... ...|+.+++.++++++.+.+..|+.. +.+ +..... +..........+... ....
T Consensus 149 -----------------~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~ 206 (292)
T COG0697 149 -----------------GIL-SLLGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL--SGFG 206 (292)
T ss_pred -----------------hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh--cccc
Confidence 011 57899999999999999999999887 443 444444 333312222222222 1111
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069 239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY 318 (361)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~ 318 (361)
.......+..+.+.+++++.+++.++++++++.++..++.+.+++|+++.+++++++||+++..+++|+.+++.|+.
T Consensus 207 ---~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~ 283 (292)
T COG0697 207 ---APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVL 283 (292)
T ss_pred ---ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 22344678888999998888999999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhcc
Q 018069 319 LVVLG 323 (361)
Q Consensus 319 l~~~~ 323 (361)
+...+
T Consensus 284 l~~~~ 288 (292)
T COG0697 284 LASLR 288 (292)
T ss_pred HHhcc
Confidence 88765
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.92 E-value=3.7e-23 Score=174.19 Aligned_cols=275 Identities=16% Similarity=0.148 Sum_probs=228.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069 8 LHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG 87 (361)
Q Consensus 8 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (361)
+++.++.+...--....+.|...+. +.+.-.+.+|..++.+++.++. |+.+.+..++++..+...|+.. ...|.
T Consensus 13 p~~~ll~amvsiq~Gas~Ak~LFP~-vG~~g~t~lRl~~aaLIll~l~----RPwr~r~~~~~~~~~~~yGvsL-g~MNl 86 (292)
T COG5006 13 PILALLVAMVSIQSGASFAKSLFPL-VGAAGVTALRLAIAALILLALF----RPWRRRLSKPQRLALLAYGVSL-GGMNL 86 (292)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHccc-cChhhHHHHHHHHHHHHHHHHh----hHHHhccChhhhHHHHHHHHHH-HHHHH
Confidence 5778888888888888899999997 9999999999999999988887 3334467788899999999974 47899
Q ss_pred HHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccc
Q 018069 88 SYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQ 167 (361)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 167 (361)
+||.+++.+|.+.+..+.++.|+.+.++..=- .+ +...+.+++.|..++.- .+
T Consensus 87 ~FY~si~riPlGiAVAiEF~GPL~vA~~~sRr------~~------d~vwvaLAvlGi~lL~p-~~-------------- 139 (292)
T COG5006 87 LFYLSIERIPLGIAVAIEFTGPLAVALLSSRR------LR------DFVWVALAVLGIWLLLP-LG-------------- 139 (292)
T ss_pred HHHHHHHhccchhhhhhhhccHHHHHHHhccc------hh------hHHHHHHHHHHHHhhee-cc--------------
Confidence 99999999999999999999999888765422 22 67788888999888862 22
Q ss_pred hhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccch
Q 018069 168 SQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGW 247 (361)
Q Consensus 168 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
......+..|..+++.++.||+.|.+..||..+..+ .-.-....+..++++..|+....... ...++.
T Consensus 140 -------~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~ag~----~l~~p~ 207 (292)
T COG5006 140 -------QSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQAGP----ALFSPS 207 (292)
T ss_pred -------CCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhcch----hhcChH
Confidence 122345568999999999999999999999887655 56778888999999999998843322 122334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccccc
Q 018069 248 EIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEE 327 (361)
Q Consensus 248 ~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~ 327 (361)
-...-+..+++.+.+.|.+-..++++.++...+.+..+||.++.+.|++++||++|+.||+|+.+|+.+.....+..+|+
T Consensus 208 ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 208 LLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 55666788999999999999999999999999999999999999999999999999999999999999887766554443
No 15
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.92 E-value=1.4e-22 Score=175.44 Aligned_cols=283 Identities=15% Similarity=0.141 Sum_probs=224.7
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhcc-C-CC-CCCHHHHHHHHHH
Q 018069 1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK-D-RP-TLTYSFLLQFFLL 77 (361)
Q Consensus 1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~-~-~~-~~~~~~~~~~~~~ 77 (361)
|+.+..+|+++.+.+.++||..+...|...+ .++.++...|.+-+..+...+....++. . +. ..+++.+....+.
T Consensus 1 ~~~~~~~Gil~~l~Ay~lwG~lp~y~kll~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~ 78 (293)
T COG2962 1 MAKDSRKGILLALLAYLLWGLLPLYFKLLEP--LPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALT 78 (293)
T ss_pred CCCcccchhHHHHHHHHHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHH
Confidence 5545689999999999999999999997644 8999999999988887665555443321 1 11 2234444555555
Q ss_pred HHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCccc
Q 018069 78 GLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVY 157 (361)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~ 157 (361)
+.+ +..++..|.+|.+...+-++++-++..|++.++++++++|||+++- |++++.++.+||....+..|+..
T Consensus 79 a~l-i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~lp- 150 (293)
T COG2962 79 ALL-IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGSLP- 150 (293)
T ss_pred HHH-HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCCCc-
Confidence 554 6789999999999999999999999999999999999999999995 99999999999999876433211
Q ss_pred CCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCC
Q 018069 158 RPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERD 237 (361)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 237 (361)
..++.-++.|+.|...-|+. +. ++.+-.......-....+...+..++.
T Consensus 151 ----------------------------wval~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~ 199 (293)
T COG2962 151 ----------------------------WVALALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADS 199 (293)
T ss_pred ----------------------------HHHHHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcC
Confidence 35566688999999986553 33 356666666666666666666655554
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHH
Q 018069 238 SAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGL 317 (361)
Q Consensus 238 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~ 317 (361)
.+.........+..++..|.+ |.++..++..+.|+++-+..+.++|.+|..-.+++.+++||+++..+++..+.|-.|+
T Consensus 200 ~~~~~~~~~~~~~LLv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL 278 (293)
T COG2962 200 GQFLQQNANSLWLLLVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLAL 278 (293)
T ss_pred chhhhcCCchHHHHHHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 331222355677888888885 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccc
Q 018069 318 YLVVLGKD 325 (361)
Q Consensus 318 ~l~~~~~~ 325 (361)
.++.+..-
T Consensus 279 ~l~~~d~l 286 (293)
T COG2962 279 ALFSIDGL 286 (293)
T ss_pred HHHHHHHH
Confidence 99876544
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.91 E-value=5e-26 Score=192.59 Aligned_cols=292 Identities=16% Similarity=0.164 Sum_probs=225.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069 5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL 84 (361)
Q Consensus 5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 84 (361)
..+|.++..++ ..+..+.++.+..++ .+|.+..-.|++.-++...|...+.+... ..+.....++++.|+.|. .
T Consensus 36 p~~gl~l~~vs-~ff~~~~vv~t~~~e--~~p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~LiLRg~mG~-t 109 (346)
T KOG4510|consen 36 PNLGLLLLTVS-YFFNSCMVVSTKVLE--NDPMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKWLILRGFMGF-T 109 (346)
T ss_pred CccCceehhhH-HHHhhHHHhhhhhhc--cChhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEEEEeehhhhh-h
Confidence 34577777777 445555555555555 69999999998888888777766544322 122233456788888876 5
Q ss_pred hHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCc
Q 018069 85 NQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASD 164 (361)
Q Consensus 85 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~ 164 (361)
+..+.|||++|++.++++++.++.|.++.+++|.++|||.++- +.++..+.+.|+++++ +++......++..
T Consensus 110 gvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g~ 181 (346)
T KOG4510|consen 110 GVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEGE 181 (346)
T ss_pred HHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCcccc
Confidence 6778889999999999999999999999999999999999995 9999999999999996 7777666554444
Q ss_pred ccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccc
Q 018069 165 QSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFH 244 (361)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 244 (361)
+++ .......|.+.++.+++.-|-..++.|++.|+.+ ......|....+.+...+...... .. .++ .
T Consensus 182 ~~s---------~~~~~~~gt~aai~s~lf~asvyIilR~iGk~~h-~~msvsyf~~i~lV~s~I~~~~ig-~~-~lP-~ 248 (346)
T KOG4510|consen 182 DSS---------QVEYDIPGTVAAISSVLFGASVYIILRYIGKNAH-AIMSVSYFSLITLVVSLIGCASIG-AV-QLP-H 248 (346)
T ss_pred ccc---------cccccCCchHHHHHhHhhhhhHHHHHHHhhcccc-EEEEehHHHHHHHHHHHHHHhhcc-ce-ecC-c
Confidence 443 1234446788888888888888888999888887 334444555555555444433222 11 222 3
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 245 SGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 245 ~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
.+.+|+.++.+|++ +++++.+.+.++|+..+..++++.+++.+++.+++.++|+|.|+++.|.|+++++.+.++...+|
T Consensus 249 cgkdr~l~~~lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 249 CGKDRWLFVNLGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred cccceEEEEEehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 56788999999996 79999999999999999999999999999999999999999999999999999999988876543
No 17
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=3.6e-21 Score=174.80 Aligned_cols=273 Identities=12% Similarity=0.058 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069 8 LHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG 87 (361)
Q Consensus 8 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (361)
++++.++++++||+..+..|... +.++.++. |..++.+++..+....+. .+ +..++.+..-+..|.+ ...++.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~~~~~~~--~~~~g~l~~~~~~~~~~~-~~-~~~~~~~~~g~l~G~~-w~ig~~ 74 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GGPYSQTL--GTTFGALILSIAIAIFVL-PE-FWALSIFLVGLLSGAF-WALGQI 74 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CCHHHHHH--HHHHHHHHHHHHHHHHhC-Cc-ccccHHHHHHHHHHHH-HHhhhh
Confidence 57889999999999999999765 47777665 777777766655544322 11 1123333444444444 568899
Q ss_pred HHHhhccCCCcchhhhhcc-chhHHHHHHHHHhhhcccccccccccch----hhHHHHHHHHHHHHHHhcCCcccCCCCC
Q 018069 88 SYIFGLDNTSPIFASAVEN-AVPAVTFIMAVLLRIEQIHLTRKDGIAK----VLGTLISVGGASVITLYKGPIVYRPNSA 162 (361)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~-~~pi~~~lla~~~l~e~~~~~~~~~~~~----~~g~~l~~~Gv~li~~~~~~~~~~~~~~ 162 (361)
+|+.+.++++.+.+..+.+ +.+++..+.+.+++|||.+.+ + ++|++++++|++++.. .++.+..
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~-~~~~~~~---- 143 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSR-SKDKSAG---- 143 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEe-ccccccc----
Confidence 9999999999999999988 899999999999999999997 8 9999999999888753 2111100
Q ss_pred CcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHH----HHHHHHHHHHHhhcCCc
Q 018069 163 SDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCF----FSLMQFSAIGAYFERDS 238 (361)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~ 238 (361)
++...+..+|+++++.++++|+.|.+..|+. ++ ++....+.+.. .+.++..+. . +.
T Consensus 144 ------------~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~-~---~~- 203 (290)
T TIGR00776 144 ------------IKSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH-I---LA- 203 (290)
T ss_pred ------------cccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH-h---cc-
Confidence 0000234679999999999999999999875 34 36777544444 333333222 1 11
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHh-cCCceeeeccchhHHHHHHHHHHHHhcCccchhhH----HHHHHH
Q 018069 239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVID-RGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGV----IGASLI 313 (361)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~-~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~----iG~~li 313 (361)
.++ ....++..+..|++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.++++++++|+.+..++ +|++++
T Consensus 204 ~~~---~~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lI 279 (290)
T TIGR00776 204 KPL---KKYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILI 279 (290)
T ss_pred cch---HHHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHH
Confidence 111 22333334448887 7999999999999 99999999999999999999999999999999999 999999
Q ss_pred HHHHHHhhc
Q 018069 314 IAGLYLVVL 322 (361)
Q Consensus 314 l~g~~l~~~ 322 (361)
+.|+.+...
T Consensus 280 i~~~~l~~~ 288 (290)
T TIGR00776 280 IIAANILGI 288 (290)
T ss_pred HHHHHHHhc
Confidence 999887654
No 18
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.85 E-value=8.9e-19 Score=160.51 Aligned_cols=266 Identities=16% Similarity=0.171 Sum_probs=207.9
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHH
Q 018069 36 KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIM 115 (361)
Q Consensus 36 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~ll 115 (361)
|..+++.++....+...+.....+++.. ++..++..+..+++. .++..+.+.|++|++.....++.+..|+.++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~ 107 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLFKFPKS---RKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVMIL 107 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccccCC---CcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHH
Confidence 8889999999988877777665442222 223344556666664 478889999999999999999999999999999
Q ss_pred HHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHH
Q 018069 116 AVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFW 195 (361)
Q Consensus 116 a~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~ 195 (361)
+.+++|+|.+++ ++.++++..+|+.+....+....... +....+...|+++.+.+.++.
T Consensus 108 ~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~~~---------------~~~~~~~~~G~~ll~~sl~~~ 166 (303)
T PF08449_consen 108 GVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSSSS---------------NSSSFSSALGIILLLLSLLLD 166 (303)
T ss_pred HHHhcCccccHH------HHHHHHHHHhhHheeeeccccccccc---------------ccccccchhHHHHHHHHHHHH
Confidence 999999999997 99999999999999875332221110 112222334999999999999
Q ss_pred HHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhh--cCCccc--cccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 018069 196 SSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYF--ERDSAA--WQFHSGWEIFCVFYSGLVASAMSFAVQIWV 270 (361)
Q Consensus 196 a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a 270 (361)
+...+.++|..++++ ++.+..++....+.+...+..... ++.... .....+..+..++...+ ++.+++.+.+..
T Consensus 167 a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~ 245 (303)
T PF08449_consen 167 AFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYL 245 (303)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 999999999998766 678999999999999988887762 221111 11111223444444444 578888888999
Q ss_pred HhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccccc
Q 018069 271 IDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEE 327 (361)
Q Consensus 271 ~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~ 327 (361)
.++.++...+.+..++.+++++++.+++|+++++.+|+|+++++.|..++.+.++|+
T Consensus 246 ~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 246 IKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 999999999999999999999999999999999999999999999999998776654
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.82 E-value=5.1e-19 Score=157.30 Aligned_cols=301 Identities=13% Similarity=0.163 Sum_probs=223.8
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CccHHHHHHHHHHHHHHHHHH----HHh---hccC----------
Q 018069 2 VPERAKLHLAMTIFQFGYAGNHVIMRTALNMGV--SKLVFPLYRNIIAVIVLVPFA----YFL---EKKD---------- 62 (361)
Q Consensus 2 ~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~--~p~~~~~~r~~~~~l~l~~~~----~~~---~~~~---------- 62 (361)
.+|...|+.++++..++|=.+.-+.+...+++- .|+..++.....-.+.+.++. .++ +|..
T Consensus 9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~ 88 (416)
T KOG2765|consen 9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEA 88 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhh
Confidence 345678999999999999999999999888632 488777655433333333322 110 0100
Q ss_pred -----------------------------------------------CC--C-CCH------------HHHHHHHHHHHH
Q 018069 63 -----------------------------------------------RP--T-LTY------------SFLLQFFLLGLV 80 (361)
Q Consensus 63 -----------------------------------------------~~--~-~~~------------~~~~~~~~~g~~ 80 (361)
+. + ..+ +..+..+....+
T Consensus 89 d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~l 168 (416)
T KOG2765|consen 89 DAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPL 168 (416)
T ss_pred hhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHH
Confidence 00 0 001 111223344444
Q ss_pred HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069 81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN 160 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 160 (361)
. .+++..++.|+.+++++..+++.++.-+|+..++.++..||+++. +++++++++.|++++.. ++..+++
T Consensus 169 W-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt~-~~s~~~~-- 238 (416)
T KOG2765|consen 169 W-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVTM-GDSKQNS-- 238 (416)
T ss_pred H-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEEe-ccccccc--
Confidence 3 478999999999999999999999999999999999999999997 99999999999999873 3332211
Q ss_pred CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHH---HHHHHHHHHHHHHHHhhcC-
Q 018069 161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVS---YSCFFSLMQFSAIGAYFER- 236 (361)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~- 236 (361)
+....+...|+++++++++.||+|.++.||-..++...+.+.. +..++..+.+.|..++...
T Consensus 239 --------------~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~ 304 (416)
T KOG2765|consen 239 --------------DLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF 304 (416)
T ss_pred --------------cCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh
Confidence 3345667899999999999999999999998776632333333 3344445555544443221
Q ss_pred CccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHH
Q 018069 237 DSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAG 316 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g 316 (361)
....++.+...+...++..+++.++++-++|.+|.-.+++..+++-+.++...+++.+.++-|.++|+.+++|...|++|
T Consensus 305 ~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~ 384 (416)
T KOG2765|consen 305 GEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVG 384 (416)
T ss_pred ccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHH
Confidence 22345555666778888888999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHhhccccc
Q 018069 317 LYLVVLGKDE 326 (361)
Q Consensus 317 ~~l~~~~~~~ 326 (361)
.++.+.....
T Consensus 385 Fv~vn~~~~~ 394 (416)
T KOG2765|consen 385 FVIVNISSEN 394 (416)
T ss_pred Hhheeccccc
Confidence 9988865443
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.78 E-value=1.2e-18 Score=156.64 Aligned_cols=273 Identities=15% Similarity=0.142 Sum_probs=218.0
Q ss_pred HHHHHHHHh--cCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcch
Q 018069 23 HVIMRTALN--MGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIF 100 (361)
Q Consensus 23 ~~~~k~~~~--~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~ 100 (361)
....|..++ ..--|..++.+++..+.+..+.....+..+..+..++..+..++.+|++. +++..+-+.++.+.+++.
T Consensus 33 ~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~VsF 111 (316)
T KOG1441|consen 33 IILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVSF 111 (316)
T ss_pred EEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchhH
Confidence 355677776 32458888888888888877777766555444444556777788888885 488999999999999999
Q ss_pred hhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccch
Q 018069 101 ASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKN 180 (361)
Q Consensus 101 ~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (361)
++.+..++|++++++++++.+|+.+++ .+..+.....|+.+... + +...
T Consensus 112 ~q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~--~-----------------------e~~f 160 (316)
T KOG1441|consen 112 YQTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASV--T-----------------------ELSF 160 (316)
T ss_pred HHHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeee--c-----------------------cccc
Confidence 999999999999999999999999997 88999999999998863 1 2335
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHhh--hCC-ChhHHHHHHHHHHHHHHH-HHHHhhcCCcc---ccccccchHHHHHH
Q 018069 181 WTLGCICLIGHCLFWSSWIVLQSPVLK--KYP-ARLSVVSYSCFFSLMQFS-AIGAYFERDSA---AWQFHSGWEIFCVF 253 (361)
Q Consensus 181 ~~~G~~~~l~a~~~~a~~~v~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~~l~ 253 (361)
+..|...++++.+..+..+++.|+.++ +.+ +++....++.-.+.+.++ |.....+++.. .....+.. ....+
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 568999999999999999999999995 333 789999999999999999 87776555433 11111222 33333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccccccc
Q 018069 254 YSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESK 329 (361)
Q Consensus 254 ~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~~ 329 (361)
+.. ++....+...+..+.+++|.+.++.+.+.-++.++.++++|+++.++.+..|+++.+.|++++.+.+.++++
T Consensus 240 ~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~ 314 (316)
T KOG1441|consen 240 LNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKK 314 (316)
T ss_pred HHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 334 345666667778899999999999999999999999999999999999999999999999999977765443
No 21
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.68 E-value=1.7e-17 Score=140.14 Aligned_cols=257 Identities=13% Similarity=0.143 Sum_probs=197.8
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHH
Q 018069 35 SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFI 114 (361)
Q Consensus 35 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l 114 (361)
.|....|+.+..-+++..++..++++ .-...|+..+++++... -++.+-..|.+|++...++++-.-..+.+.+
T Consensus 47 ~Pt~QtFl~Y~LLalVY~~~~~fR~~-----~~~~~~~hYilla~~DV-EaNy~vV~AyQyTsmtSi~lLDcwaip~v~~ 120 (336)
T KOG2766|consen 47 APTSQTFLNYVLLALVYGPIMLFRRK-----YIKAKWRHYILLAFVDV-EANYFVVKAYQYTSMTSIMLLDCWAIPCVLV 120 (336)
T ss_pred CccHHHHHHHHHHHHHHhhHHHhhhH-----HHHHHHHHhhheeEEee-cccEEEeeehhhcchHHHHHHHHhhhHHHHH
Confidence 48888999999999999998887542 11233445777777754 5677788999999999999999999999999
Q ss_pred HHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHH
Q 018069 115 MAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLF 194 (361)
Q Consensus 115 la~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 194 (361)
++|+++|.|-++. ++.|+++|+.|+.++++.+-... + +.++.+..+|+++.++++.+
T Consensus 121 lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~ag-d----------------~aggsnp~~GD~lvi~GATl 177 (336)
T KOG2766|consen 121 LSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHAG-D----------------RAGGSNPVKGDFLVIAGATL 177 (336)
T ss_pred HHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeeccc-c----------------ccCCCCCccCcEEEEeccee
Confidence 9999999999996 99999999999999874221111 0 33466778999999999999
Q ss_pred HHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018069 195 WSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRG 274 (361)
Q Consensus 195 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~ 274 (361)
||+.++..+.+.|+.+ ...++....++|+++..+-.+ .+.... ............+. ..++.+.-|.+.-.-+|..
T Consensus 178 YaVSNv~EEflvkn~d-~~elm~~lgLfGaIIsaIQ~i-~~~~~~-~tl~w~~~i~~yl~-f~L~MFllYsl~pil~k~~ 253 (336)
T KOG2766|consen 178 YAVSNVSEEFLVKNAD-RVELMGFLGLFGAIISAIQFI-FERHHV-STLHWDSAIFLYLR-FALTMFLLYSLAPILIKTN 253 (336)
T ss_pred eeeccccHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHh-hhccce-eeEeehHHHHHHHH-HHHHHHHHHHhhHHheecC
Confidence 9999999999999885 889999999999999999855 443322 22222122222222 3334555555555667888
Q ss_pred CceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069 275 GPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE 326 (361)
Q Consensus 275 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~ 326 (361)
+++-.++-..+.-+++.++ ..||-+.+|...+..+.+..|.+++..+++.
T Consensus 254 ~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~ 303 (336)
T KOG2766|consen 254 SATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKD 303 (336)
T ss_pred CceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccC
Confidence 8888888888888999888 6788889999999999999999888554443
No 22
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1.2e-13 Score=123.51 Aligned_cols=297 Identities=12% Similarity=0.094 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCccHHHHHHHHHHHHHHHHHHHHhhcc----CCCC------CCHHHHHH
Q 018069 7 KLHLAMTIFQFGYAGNHVIMRTALNMG---VSKLVFPLYRNIIAVIVLVPFAYFLEKK----DRPT------LTYSFLLQ 73 (361)
Q Consensus 7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~~~----~~~~------~~~~~~~~ 73 (361)
.-++.++...+-++......|+....+ +.|...+++--++-.++.....+...|. ..+. ..+++...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 456677778888899999999887765 6677778777777777766666655322 1111 13334455
Q ss_pred HHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcC
Q 018069 74 FFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKG 153 (361)
Q Consensus 74 ~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 153 (361)
..+-+++ +++.|-++|.++.+.+++..++.+++-.+.|+++..+++++|++++ ||.++.+.++|+.++-....
T Consensus 95 ~~vPa~i-YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPALI-YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHHH-HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCC
Confidence 5555555 5577779999999999999999999999999999999999999997 99999999999999842112
Q ss_pred CcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHH
Q 018069 154 PIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGA 232 (361)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~ 232 (361)
+..... .+....+...|....+.++++.+...++.+|++|+.+ +.+..+....+.|.++.+...+
T Consensus 168 ~~~~a~--------------~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~ 233 (345)
T KOG2234|consen 168 SPTGAK--------------SESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTIL 233 (345)
T ss_pred CCCCcc--------------CCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 111110 0234567789999999999999999999999998766 3455555566666666666655
Q ss_pred hhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHH
Q 018069 233 YFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASL 312 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~l 312 (361)
..+.+...+.... ..|-.....-++..+++=.+....+|+.+...=+.......+++.+.++.++|-.||....+|..+
T Consensus 234 ~~d~~~i~~~gff-~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~l 312 (345)
T KOG2234|consen 234 LQDGEAINEYGFF-YGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALL 312 (345)
T ss_pred hccccccccCCcc-ccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHH
Confidence 4332222111110 111112222222344444455666788888777778888999999999999999999999999999
Q ss_pred HHHHHHHhhcccc
Q 018069 313 IIAGLYLVVLGKD 325 (361)
Q Consensus 313 il~g~~l~~~~~~ 325 (361)
++.++.++...++
T Consensus 313 Vi~Si~lY~~~P~ 325 (345)
T KOG2234|consen 313 VILSIFLYSLYPA 325 (345)
T ss_pred HHHHHHHhhcCCc
Confidence 9999999984443
No 23
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.63 E-value=2.8e-15 Score=113.56 Aligned_cols=135 Identities=16% Similarity=0.168 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCHHHHHHHHHHHHHHHHHh
Q 018069 7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRP-TLTYSFLLQFFLLGLVGITLN 85 (361)
Q Consensus 7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 85 (361)
...++.+++++.||...++.|...+. +||...++.|..+..+++..++...++.+.+ ..+.|.|..+.+.|+.+ .++
T Consensus 3 ~~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~-gls 80 (140)
T COG2510 3 AAIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAG-GLS 80 (140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHH-HHH
Confidence 46788999999999999999999995 9999999999999999888888765543322 24678888888888665 599
Q ss_pred HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
+.+||+|++...++.+.++-.++|+++++++++++|||++.+ +++|+.+..+|++++.
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 999999999999999999999999999999999999999997 9999999999998764
No 24
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.63 E-value=3.2e-14 Score=125.29 Aligned_cols=230 Identities=14% Similarity=0.108 Sum_probs=169.2
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHH
Q 018069 67 TYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGAS 146 (361)
Q Consensus 67 ~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 146 (361)
++++..++.+-+++ +++.+.+.+.++++++++..+++.++..+++++++++++|+|++.+ ||.++.+.++|+.
T Consensus 13 ~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence 45666677777777 5689999999999999999999999999999999999999999997 9999999999999
Q ss_pred HHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHH
Q 018069 147 VITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLM 225 (361)
Q Consensus 147 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i 225 (361)
++-. ++....+.++..+... +....+...|.++.+.++++.+...++.+|..|+.+ +.+..+......+.+
T Consensus 86 lv~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~ 157 (244)
T PF04142_consen 86 LVQL-SSSQSSDNSSSSSVHH-------DASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGIL 157 (244)
T ss_pred eeec-CCcccccccccccccc-------ccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 8742 2221111110000000 123456689999999999999999999999999875 455666666777777
Q ss_pred HHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchh
Q 018069 226 QFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG 305 (361)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~ 305 (361)
+.++.....+.+. ..+......+-...+..++...++=.+....+|+.+...=+.....+.+++.+.++.+||.+++..
T Consensus 158 ~~~~~~~~~~~~~-~~~~g~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~ 236 (244)
T PF04142_consen 158 FNLLALLLSDGSA-ISESGFFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLS 236 (244)
T ss_pred HHHHHHhcccccc-cccCCchhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchH
Confidence 7776655432221 111111111111222233345556666678899999999999999999999999999999999999
Q ss_pred hHHHHHH
Q 018069 306 GVIGASL 312 (361)
Q Consensus 306 ~~iG~~l 312 (361)
..+|+.+
T Consensus 237 f~lg~~~ 243 (244)
T PF04142_consen 237 FLLGAAL 243 (244)
T ss_pred Hhhheec
Confidence 9999865
No 25
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.61 E-value=7.8e-14 Score=116.74 Aligned_cols=256 Identities=14% Similarity=0.122 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHH
Q 018069 38 VFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAV 117 (361)
Q Consensus 38 ~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~ 117 (361)
.++++++....++.=.+...+++... .+.+.+. +... .+.+.+.+...+.|++|.|-....+-.+.-|+-+++++.
T Consensus 55 aLVf~qC~~N~vfAkvl~~ir~~~~~--D~t~~~~-YaAc-s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGV 130 (337)
T KOG1580|consen 55 ALVFFQCTANTVFAKVLFLIRKKTEI--DNTPTKM-YAAC-SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGV 130 (337)
T ss_pred HHHHHHHHHHHHHHHhheeecccccc--cCCcchH-HHHH-HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeeh
Confidence 34566666666554444433332111 1122222 2222 333556777778999999999999999999999999999
Q ss_pred HhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHH
Q 018069 118 LLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSS 197 (361)
Q Consensus 118 ~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~ 197 (361)
.+.|.+-+|+ +...++....|+.+.+ ++..... ...+.+...|.++.+++...-++
T Consensus 131 l~~~KsY~w~------kY~cVL~IV~GValFm-YK~~Kv~-----------------g~e~~t~g~GElLL~lSL~mDGl 186 (337)
T KOG1580|consen 131 LFAHKSYHWR------KYCCVLMIVVGVALFM-YKENKVG-----------------GAEDKTFGFGELLLILSLAMDGL 186 (337)
T ss_pred hhhcccccHH------HHHHHHHHHHHHHHhh-ccccccC-----------------CCcccccchHHHHHHHHHHhccc
Confidence 9999999998 9999999999999987 4532221 22345667899999999999998
Q ss_pred HHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 018069 198 WIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDS--AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRG 274 (361)
Q Consensus 198 ~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~ 274 (361)
....+.++-+.+. ...+++++..+++.+.+..-.++.+.-. ..+..--+..|+-+..+++ ++.+++++.+.-+...
T Consensus 187 Tg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~F 265 (337)
T KOG1580|consen 187 TGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEF 265 (337)
T ss_pred chhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHh
Confidence 8888888765544 4567889999999988887666433311 1122223356777777887 6899999999999999
Q ss_pred CceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069 275 GPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL 322 (361)
Q Consensus 275 ~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~ 322 (361)
+|-.-+++..+.-.|+++.+.++++.+++..||+|.++++.|...-..
T Consensus 266 gPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 266 GPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred CCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 999999999999999999999999999999999999999999776543
No 26
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.59 E-value=7.1e-14 Score=121.64 Aligned_cols=265 Identities=15% Similarity=0.188 Sum_probs=207.6
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHH
Q 018069 35 SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFI 114 (361)
Q Consensus 35 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~l 114 (361)
++....+.+-+++.++-..+..+++++. ...+.|..+...++.+. ++..+.|.|++|.+-....+-.+.--+-+++
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~k~~~---~~~apl~~y~~is~tn~-~s~~~~yeaLKyvSyPtq~LaKscKmIPVml 125 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWWKKEL---SGVAPLYKYSLISFTNT-LSSWCGYEALKYVSYPTQTLAKSCKMIPVML 125 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccccC---CCCCchhHHhHHHHHhh-cchHHHHHHHHhccchHHHHHHHhhhhHHHH
Confidence 5677888888888877755554443332 22344555667777654 8888999999999999999999999999999
Q ss_pred HHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHH
Q 018069 115 MAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLF 194 (361)
Q Consensus 115 la~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~ 194 (361)
...++.|.|.+.+ +.+...+.-.|+.+..+++.+.... .....+...|..+.....++
T Consensus 126 mg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s~~----------------~~g~~ns~~G~~Ll~~~L~f 183 (327)
T KOG1581|consen 126 MGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDSSS----------------KSGRENSPIGILLLFGYLLF 183 (327)
T ss_pred HHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCCcc----------------ccCCCCchHhHHHHHHHHHH
Confidence 9999999999997 8999999999999887543322111 23445777999999999999
Q ss_pred HHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCc--cccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018069 195 WSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDS--AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVI 271 (361)
Q Consensus 195 ~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~ 271 (361)
-+..+..++++.+++. ..+.++++..+++.+......+..+... ..+....+..++-++.... |+.+++.+.++-+
T Consensus 184 DgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI 262 (327)
T KOG1581|consen 184 DGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTI 262 (327)
T ss_pred HhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhH
Confidence 9999999999988665 6789999999999998887755322211 1122222234555555555 5789999999999
Q ss_pred hcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069 272 DRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE 326 (361)
Q Consensus 272 ~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~ 326 (361)
++.++...+.+..+.-+++++++.+.+|.+++..|++|..+++.|+.+-...+.+
T Consensus 263 ~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 263 ERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999887766555
No 27
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.58 E-value=1.6e-12 Score=114.74 Aligned_cols=291 Identities=12% Similarity=0.053 Sum_probs=214.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH--HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPL--YRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGIT 83 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~--~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 83 (361)
.++++..+.-++.--...++.|....+.=-|..+.. .|.+.+.+.+...-..+.- ..++.+++..+..+...++- .
T Consensus 11 ~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv-~~~~l~~~~~kk~~P~~~lf-~ 88 (314)
T KOG1444|consen 11 SSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLV-NFRPLDLRTAKKWFPVSLLF-V 88 (314)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcee-ecCCcChHHHHHHccHHHHH-H
Confidence 445666666666666677888998886223444444 7887777766665544332 23456677767767666663 3
Q ss_pred HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCC
Q 018069 84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSAS 163 (361)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 163 (361)
+....--.+++|+++...+++.+.+|+++++....++|.+++.+ .+.++...++|......
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~------------- 149 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAF------------- 149 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhcc-------------
Confidence 66666678999999999999999999999999999999777775 88888888888777652
Q ss_pred cccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCc----
Q 018069 164 DQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDS---- 238 (361)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~---- 238 (361)
.+......|+.+++...++.+.+.+..|+-.+..+ +.+...+|..+.+...+.....+.++..
T Consensus 150 ------------~d~sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~ 217 (314)
T KOG1444|consen 150 ------------TDLSFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSL 217 (314)
T ss_pred ------------ccceecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHh
Confidence 12223335999999999999999999999877554 5678899999999998888887655421
Q ss_pred cccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHH
Q 018069 239 AAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLY 318 (361)
Q Consensus 239 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~ 318 (361)
..........+..+...++++-++.| +-..+.+..++...++++..+...+.+-+.+++|++.++...+|..+-+.|-+
T Consensus 218 ~~~~~~~~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv 296 (314)
T KOG1444|consen 218 NFDNWSDSSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGV 296 (314)
T ss_pred hcccccchhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhh
Confidence 01111123346666666665444444 55789999999999999977888888878788888999999999999999999
Q ss_pred Hhhccccccccc
Q 018069 319 LVVLGKDEESKY 330 (361)
Q Consensus 319 l~~~~~~~~~~~ 330 (361)
++.+.+.++++.
T Consensus 297 ~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 297 LYSYATFRKKKQ 308 (314)
T ss_pred HHhhhhhhhccC
Confidence 988776554433
No 28
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.58 E-value=5e-14 Score=106.82 Aligned_cols=135 Identities=19% Similarity=0.155 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHH
Q 018069 184 GCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMS 263 (361)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 263 (361)
..++++++++++++..++.|-..++.+ |...++.......+.+........ +.+.....+.+.|..++..|+ ++..+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g-~~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTG-NWQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcC-ceecccccCcceehhhhHHHH-HHHHH
Confidence 568999999999999999999888775 788888888888888777776433 333333346678888888886 78999
Q ss_pred HHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 264 FAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 264 ~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
..+|++|+|..+++++.++..++|+++.+++++++||++|..+++|+++|.+|.++..
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 9999999999999999999999999999999999999999999999999999987654
No 29
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.57 E-value=6.5e-13 Score=115.62 Aligned_cols=253 Identities=13% Similarity=0.178 Sum_probs=188.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHhhccCCC---CCCHHHHHH-HHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHH
Q 018069 36 KLVFPLYRNIIAVIVLVPFAYFLEKKDRP---TLTYSFLLQ-FFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAV 111 (361)
Q Consensus 36 p~~~~~~r~~~~~l~l~~~~~~~~~~~~~---~~~~~~~~~-~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~ 111 (361)
|..++.++.++-+++........+++..+ ..+|++..+ +...++. .+....+.+++++|++.+..++..+..++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala-ta~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA-TALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh-hhcccccccceeeeeeeeeeeeccccHHHH
Confidence 78888888888877766655544433222 445655554 4455555 457888889999999999999999999999
Q ss_pred HHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHH
Q 018069 112 TFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGH 191 (361)
Q Consensus 112 ~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a 191 (361)
+.+++.++.-||+++. -..-+.+...|+++++. ++ .+....|.++.+++
T Consensus 124 IllFs~if~lEk~~w~------L~l~v~lI~~Glflft~-Ks------------------------Tqf~i~Gf~lv~~a 172 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KS------------------------TQFNIEGFFLVLAA 172 (349)
T ss_pred HHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cc------------------------cceeehhHHHHHHH
Confidence 9999999999999995 55556666667776652 22 22445799999999
Q ss_pred HHHHHHHHHHHHhHhhhCC----ChhHHHHHHHHHHHHHHHHHHHhhcCCccc-----cccccch-HHHHHHHHHHHHHH
Q 018069 192 CLFWSSWIVLQSPVLKKYP----ARLSVVSYSCFFSLMQFSAIGAYFERDSAA-----WQFHSGW-EIFCVFYSGLVASA 261 (361)
Q Consensus 192 ~~~~a~~~v~~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~-~~~~l~~~~~~~~~ 261 (361)
.++-++-..+.++.+++.+ +|+...+...-...+.++|..+.+|+.... +...+.. .+..+..++. ++.
T Consensus 173 S~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~ 251 (349)
T KOG1443|consen 173 SLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGL 251 (349)
T ss_pred HHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHH
Confidence 9998888888888777655 688888888888888899999988875322 2222222 2333333332 344
Q ss_pred HHHHH---HHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 262 MSFAV---QIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 262 ~~~~l---~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
.++.+ -+.-+.+++....++.+...-+...+++..+.+|.++..-|.|..+.+.|+....
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 44444 3344678899999999999999999999999999999999999999999999883
No 30
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.53 E-value=3.2e-14 Score=112.67 Aligned_cols=125 Identities=25% Similarity=0.367 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCC
Q 018069 17 FGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNT 96 (361)
Q Consensus 17 ~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~ 96 (361)
++||...+..|...++ .||....++|+..+.+ ++++....+++..+..+++++......+.++..+++.+++++++++
T Consensus 1 ~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK-ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhcc-CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhc
Confidence 4799999999999996 9999999999999998 6666655554434566778888888888887678999999999999
Q ss_pred CcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 97 SPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 97 ~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
+++.++++.++.|+++.+++++++||+++++ +++|+.++++|++++.
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997 9999999999999874
No 31
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.52 E-value=4e-13 Score=115.35 Aligned_cols=277 Identities=17% Similarity=0.132 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHhc---CC----CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCC-----------HHHHHH-HHHHHHH
Q 018069 20 AGNHVIMRTALNM---GV----SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLT-----------YSFLLQ-FFLLGLV 80 (361)
Q Consensus 20 ~~~~~~~k~~~~~---~~----~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~g~~ 80 (361)
+.+.+++|++-+. |. +|+..+..-++.-++.++.+...+.|...+... ...... ++.-.++
T Consensus 16 s~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~ 95 (372)
T KOG3912|consen 16 SFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALC 95 (372)
T ss_pred cHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHH
Confidence 5678888987542 22 366666666777777777777776654332110 011111 2334444
Q ss_pred HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069 81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN 160 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 160 (361)
- ..+..+.|.|+.+++++..+++.....+|+.+++.-+++.++..+ ||+|+.....|++++-.. +-...+
T Consensus 96 D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~-d~~~~~-- 165 (372)
T KOG3912|consen 96 D-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL-DVHLVT-- 165 (372)
T ss_pred H-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee-eccccc--
Confidence 4 367778889999999999999999999999999999999999997 999999999999987521 111100
Q ss_pred CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhc----
Q 018069 161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFE---- 235 (361)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~---- 235 (361)
.+ -++..+...|+++.+.+-+.-|+.+++.+|..++++ +|.....+..++|.+++..+.....
T Consensus 166 -~p-----------~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~ 233 (372)
T KOG3912|consen 166 -DP-----------YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPS 233 (372)
T ss_pred -CC-----------ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheec
Confidence 00 122356678999999999999999999999998877 8999999999999766665554322
Q ss_pred CC-cc----c-cc-------cccchHHHHHHHHHHHHHHHHHHHHHHH----HhcCCceeeeccchhHHHHHHHHHHHHh
Q 018069 236 RD-SA----A-WQ-------FHSGWEIFCVFYSGLVASAMSFAVQIWV----IDRGGPMFVSAYLPVQTMLVAIMATIAL 298 (361)
Q Consensus 236 ~~-~~----~-~~-------~~~~~~~~~l~~~~~~~~~~~~~l~~~a----~~~~~~~~~s~~~~~~pv~~~l~~~~~~ 298 (361)
++ +. . +. .........+...| ..++..++|.+ .|+.++++-.++..+...+-.+++....
T Consensus 234 ~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~---~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~ 310 (372)
T KOG3912|consen 234 GDSFSCNPRGVLEDWGDAFAALQESPSLAVALIG---FTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG 310 (372)
T ss_pred CCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhh---hhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence 11 10 0 11 01111122222223 33444444443 5778899999999999999999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHhh
Q 018069 299 GEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 299 ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
.|.+...|+.|.++.+.|+++++
T Consensus 311 ~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 311 WEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.46 E-value=3.1e-13 Score=107.00 Aligned_cols=125 Identities=21% Similarity=0.358 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018069 193 LFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVID 272 (361)
Q Consensus 193 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~ 272 (361)
++||.+.+..|+..++.+ +....++++..+.+ ..+.....+... ....+...+...++.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 468999999999999875 89999999999998 666666544432 33345567788888888888999999999999
Q ss_pred cCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 273 RGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 273 ~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
+.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988764
No 33
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.34 E-value=2.1e-12 Score=110.71 Aligned_cols=277 Identities=15% Similarity=0.088 Sum_probs=193.9
Q ss_pred HHHHHHhcC----CCccHHHHHHHHHHHHHHHHHHHHhhccC----CC--CCCHHHHHHHHHHHHHHHHHhHHHHHhhcc
Q 018069 25 IMRTALNMG----VSKLVFPLYRNIIAVIVLVPFAYFLEKKD----RP--TLTYSFLLQFFLLGLVGITLNQGSYIFGLD 94 (361)
Q Consensus 25 ~~k~~~~~~----~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~al~ 94 (361)
..|+.++.. =.|..+.+.++++...+...+-....+-. .+ +++.+.-+.+.-+.++-+ +....-+++++
T Consensus 46 ~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi-~mI~fnnlcL~ 124 (347)
T KOG1442|consen 46 LNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFI-LMISFNNLCLK 124 (347)
T ss_pred hHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheee-eehhccceehh
Confidence 455555521 14788888999888776665554433221 11 233333344444444322 34444568999
Q ss_pred CCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhcc
Q 018069 95 NTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLG 174 (361)
Q Consensus 95 ~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (361)
|.+++...+-.++..+|+.+++++++|+|-+.. -..++.+.++|-.+=+ +.+
T Consensus 125 yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGv--dqE-------------------- 176 (347)
T KOG1442|consen 125 YVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGV--DQE-------------------- 176 (347)
T ss_pred hcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheecc--ccc--------------------
Confidence 999999999999999999999999999999985 5666666655544322 111
Q ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCcc--cccc-ccchHHH
Q 018069 175 DTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSA--AWQF-HSGWEIF 250 (361)
Q Consensus 175 ~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~-~~~~~~~ 250 (361)
...+.-.+.|.++++.+.++-|+..+..||...... .-+..++|....+.+..+|+..+.++-.. .++. +....|.
T Consensus 177 ~~~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~ 256 (347)
T KOG1442|consen 177 GSTGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWI 256 (347)
T ss_pred cccCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHH
Confidence 112345568999999999999999999997765433 45788999999999999999886433111 1112 2344566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccccccc
Q 018069 251 CVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEESKY 330 (361)
Q Consensus 251 ~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~~~ 330 (361)
.+...|+++-.++| .-.+-+|.++|.+..+-..-.-..-.+++..+++|.-+..-|-|-.++++|...+++.|.++.++
T Consensus 257 ~mtLsglfgF~mgy-vTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~ 335 (347)
T KOG1442|consen 257 LMTLSGLFGFAMGY-VTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK 335 (347)
T ss_pred HHHHHHHHHHHhhh-eeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence 66666665333333 22455888999999999999999999999999999999999999999999999998876655444
Q ss_pred c
Q 018069 331 N 331 (361)
Q Consensus 331 ~ 331 (361)
+
T Consensus 336 ~ 336 (347)
T KOG1442|consen 336 A 336 (347)
T ss_pred h
Confidence 3
No 34
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=99.30 E-value=8.9e-11 Score=106.54 Aligned_cols=278 Identities=14% Similarity=0.102 Sum_probs=161.9
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCC-CCCHHH-HHHHHHHH
Q 018069 1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRP-TLTYSF-LLQFFLLG 78 (361)
Q Consensus 1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-~~~~~~-~~~~~~~g 78 (361)
|+.+..-|.+..+.++++-+....+-|....+ .+. ...++ ...++. ....+..|
T Consensus 1 ~~~~~~iGv~lav~ss~~~~~g~~lqk~~~~r-~~~-----------------------~~~~~~~~~~~~l~~~~W~~G 56 (300)
T PF05653_consen 1 MNTDFYIGVLLAVVSSIFIAVGFNLQKKSHLR-LPR-----------------------GSLRAGSGGRSYLRRPLWWIG 56 (300)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-----------------------ccccccchhhHHHhhHHHHHH
Confidence 66677889999999999999999999987553 111 00010 011111 22456666
Q ss_pred HHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccC
Q 018069 79 LVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYR 158 (361)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~ 158 (361)
++...++..+.+.|+.+.|++.++++..+.-++.++++..++|||++++ ++.|+.+++.|..++... ++.+.+
T Consensus 57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~-~~~~~~ 129 (300)
T PF05653_consen 57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIF-APKEEP 129 (300)
T ss_pred HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEe-CCCCCC
Confidence 6667788889999999999999999999999999999999999999997 999999999999988643 332211
Q ss_pred CCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHH-------HHH
Q 018069 159 PNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFS-------AIG 231 (361)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~ 231 (361)
..+. ++.. ....+....-..... ..++..+.....+|..++. ...........+....+ .+.
T Consensus 130 ~~t~-~~l~-------~~~~~~~fl~y~~~~-~~~~~~L~~~~~~r~g~~~--i~vyi~i~sl~Gs~tvl~~K~i~~~i~ 198 (300)
T PF05653_consen 130 IHTL-DELI-------ALLSQPGFLVYFILV-LVLILILIFFIKPRYGRRN--ILVYISICSLIGSFTVLSAKAISILIK 198 (300)
T ss_pred cCCH-HHHH-------HHhcCcceehhHHHH-HHHHHHHHHhhcchhcccc--eEEEEEEeccccchhhhHHHHHHHHHH
Confidence 1000 0000 000000011111111 1122222222222222221 11111111111111111 111
Q ss_pred HhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCc--cchh---
Q 018069 232 AYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEE--FYLG--- 305 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~--~s~~--- 305 (361)
...+++ .++. .+..|..+ ...+.+........|+++++.+++.+.++.+. -...+.+-|.++++|. .++.
T Consensus 199 ~~~~g~-~~f~--~~~~y~l~-~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~ 274 (300)
T PF05653_consen 199 LTFSGD-NQFT--YPLTYLLL-LVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQII 274 (300)
T ss_pred HHhcCc-hhhh--hhHHHHHH-HHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHH
Confidence 111221 1121 22333333 33344567778888999999999999988877 4555566677788875 3443
Q ss_pred -hHHHHHHHHHHHHHhhccc
Q 018069 306 -GVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 306 -~~iG~~lil~g~~l~~~~~ 324 (361)
...|+.+++.|+++....+
T Consensus 275 ~~~~G~~~ii~GV~lL~~~~ 294 (300)
T PF05653_consen 275 GFLCGFLIIIIGVFLLSSSK 294 (300)
T ss_pred HHHHHHHHHHHhhheeeccC
Confidence 3567888888988876443
No 35
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.29 E-value=6.8e-11 Score=106.02 Aligned_cols=132 Identities=21% Similarity=0.293 Sum_probs=112.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc--HHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHH
Q 018069 5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKL--VFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGI 82 (361)
Q Consensus 5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~--~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 82 (361)
+.+|.++.++++++|+......|...++ .++. ....+++.++.+++.++.+..++. +..+.+.+...+..++++.
T Consensus 126 ~~~G~~~~l~a~~~~a~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 126 NPAGLLLGLGSGISFALGTVLYKRLVKK-EGPELLQFTGWVLLLGALLLLPFAWFLGPN--PQALSLQWGALLYLGLIGT 202 (260)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhHHhhc-CCchHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcchHHHHHHHHHHHHHH
Confidence 3579999999999999999999998875 6654 444477999998888887664332 2335677777888888877
Q ss_pred HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHH
Q 018069 83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGA 145 (361)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv 145 (361)
.+++.+|++++++.+++.++.+.++.|+++.+++++++||+++.+ ++.|+.+.+.|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhc
Confidence 789999999999999999999999999999999999999999997 999999999886
No 36
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.28 E-value=5.2e-11 Score=99.18 Aligned_cols=277 Identities=13% Similarity=0.104 Sum_probs=190.7
Q ss_pred HHHHHHHHHhc-CCC-ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcc
Q 018069 22 NHVIMRTALNM-GVS-KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPI 99 (361)
Q Consensus 22 ~~~~~k~~~~~-~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~ 99 (361)
+.+-.|+.++. |++ -+.+++.+.++..+-+..+-..+.-+.| ..+.|.|...- ++- ......--.+++|+++.
T Consensus 21 mTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR-~t~aK~WfpiS---fLL-v~MIyt~SKsLqyL~vp 95 (309)
T COG5070 21 MTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR-LTKAKKWFPIS---FLL-VVMIYTSSKSLQYLAVP 95 (309)
T ss_pred HHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee-hhhhhhhcCHH---HHH-HHHHHhcccceeeeeee
Confidence 33445655543 222 3445566666655555554443333333 22233333222 211 12333344799999999
Q ss_pred hhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccc
Q 018069 100 FASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEK 179 (361)
Q Consensus 100 ~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (361)
..+++.+++.+.++.....++|.|++-- +..+.++.++.-+.-.+.+.+.. .-..+
T Consensus 96 iYTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~~------------------~~~~~ 151 (309)
T COG5070 96 IYTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQAS------------------AFKAQ 151 (309)
T ss_pred HHHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhHH------------------HHHhc
Confidence 9999999999999999999999988884 78877777666655543111100 11223
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCccc--cccccchHHHHHHHHH
Q 018069 180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSAA--WQFHSGWEIFCVFYSG 256 (361)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~ 256 (361)
..+.|++++...++..+.+....|+-.+-.+ .....++|..+.+..+++.+..++|+.... ....+.....++...|
T Consensus 152 ~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISg 231 (309)
T COG5070 152 ILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISG 231 (309)
T ss_pred ccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHH
Confidence 4567999999999999999999888766433 567889999999999999999987764322 2222334466777778
Q ss_pred HHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccccc
Q 018069 257 LVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEES 328 (361)
Q Consensus 257 ~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~ 328 (361)
+. ++.--++-.|+++.++.+..++++.++-.-..+-|.++|||+.+...+..+.+=..+-.++...+.+++
T Consensus 232 l~-svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~ 302 (309)
T COG5070 232 LC-SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQ 302 (309)
T ss_pred HH-HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 444444568999999999999999999999999999999999999999988887777667766555433
No 37
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1.5e-10 Score=99.63 Aligned_cols=265 Identities=13% Similarity=0.124 Sum_probs=178.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccC-CCcchhhhhccchhHHHHHH
Q 018069 37 LVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDN-TSPIFASAVENAVPAVTFIM 115 (361)
Q Consensus 37 ~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~~~ll 115 (361)
..+++.++++-++--+++.-.... .+++.+.|++...... ....+.+-++++++ .+...-.++.+-.++.++++
T Consensus 34 NLITFaqFlFia~eGlif~skf~~-~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~ 108 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIFTSKFFT-VKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL 108 (330)
T ss_pred eehHHHHHHHHHHhceeeeccccc-cCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence 456677776665544444311111 2245666664443322 22456677799998 88888889999999999999
Q ss_pred HHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHH
Q 018069 116 AVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFW 195 (361)
Q Consensus 116 a~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~ 195 (361)
+++++|.|-+.+ |..++++..+|+++..+.+.+..... .++-+. ++.......+..|+.+...+.+..
T Consensus 109 g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~~--~~~l~~----~~~~~~~~~w~iGi~lL~~al~~s 176 (330)
T KOG1583|consen 109 GWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRSK--LSGLDS----GSAQSDFFWWLIGIALLVFALLLS 176 (330)
T ss_pred HHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhhh--hccccc----CcccccchHHHHHHHHHHHHHHHH
Confidence 999999888887 99999999999999886554332220 000000 000122345678999999999999
Q ss_pred HHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhcCCcc-ccc--------------cccchHHHHHHHHHHHH
Q 018069 196 SSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAIGAYFERDSA-AWQ--------------FHSGWEIFCVFYSGLVA 259 (361)
Q Consensus 196 a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~--------------~~~~~~~~~l~~~~~~~ 259 (361)
|.-.++++...+++. ++-+..+|..+.+... .++..+|.. .+. ..-+..|+.++...+ .
T Consensus 177 a~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~----Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L-~ 251 (330)
T KOG1583|consen 177 AYMGIYQETTYQKYGKHWKEALFYTHFLSLPL----FLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVL-T 251 (330)
T ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHhccch----HHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHH-H
Confidence 999999988888776 6678888877766544 333333211 000 012234555443332 2
Q ss_pred HHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 260 SAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 260 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
...+.-..+.--.+.++-+++++..+.-.++.+++.+.|+.++++..|+|..++..|.+++...
T Consensus 252 Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 252 QYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334446677889999999999999999999999999999999999999998887543
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.23 E-value=2.3e-11 Score=94.59 Aligned_cols=103 Identities=18% Similarity=0.279 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHH
Q 018069 41 LYRNIIAVIVLVPFAYFLEKKD--RPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVL 118 (361)
Q Consensus 41 ~~r~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~ 118 (361)
.+|+..+.+++..+...+++.. .+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5788899988888877754321 12233455566677788877688999999999999 59999999999999999999
Q ss_pred hhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 119 LRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 119 ~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
++|||++++ ++.++.++++|++++..
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence 999999998 99999999999999974
No 39
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.22 E-value=7.4e-09 Score=91.14 Aligned_cols=251 Identities=14% Similarity=0.123 Sum_probs=172.2
Q ss_pred CccHHHHHHHHHHHHHHHHHHHHhhccCCCCCC--HHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhc-cchhHH
Q 018069 35 SKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLT--YSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVE-NAVPAV 111 (361)
Q Consensus 35 ~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~ 111 (361)
+|.+..+--.+-+.++-+..... .+ |..+ .+.+..-++.|++. .+++...+.+.++..++.+.++. .++-+.
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~-~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QLvg 85 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLF-RQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQLVG 85 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-hC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence 45554444444444443333333 22 2333 36667777778775 58999999999999999999887 567788
Q ss_pred HHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHH
Q 018069 112 TFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGH 191 (361)
Q Consensus 112 ~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a 191 (361)
+.+++.++++|.-+.+++ ..-.+++++.++|+.+... +++.... .+++.+..+|....+.+
T Consensus 86 ~sl~gv~~fgEW~~~~~~--~~G~~Al~liiiGv~lts~-~~~~~~~----------------~~~~~~~~kgi~~Ll~s 146 (269)
T PF06800_consen 86 TSLIGVLFFGEWTTTTQK--IIGFLALVLIIIGVILTSY-QDKKSDK----------------SSSKSNMKKGILALLIS 146 (269)
T ss_pred HHHHHHhhcCCCCCcchH--HHHHHHHHHHHHHHHHhcc-ccccccc----------------cccccchhhHHHHHHHH
Confidence 999999999997776521 1224477888888888764 3322211 12345667899999999
Q ss_pred HHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q 018069 192 CLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVI 271 (361)
Q Consensus 192 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~ 271 (361)
.+.|..|.+..|.. +. +++...+-+.....+....+..+.... .+ .+..+.-+..|++ -.++..++..+.
T Consensus 147 tigy~~Y~~~~~~~--~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~----~k~~~~nil~G~~-w~ignl~~~is~ 216 (269)
T PF06800_consen 147 TIGYWIYSVIPKAF--HV-SGWSAFLPQAIGMLIGAFIFNLFSKKP--FF----EKKSWKNILTGLI-WGIGNLFYLISA 216 (269)
T ss_pred HHHHHHHHHHHHhc--CC-ChhHhHHHHHHHHHHHHHHHhhccccc--cc----ccchHHhhHHHHH-HHHHHHHHHHhH
Confidence 99999999996652 33 467777766555555555554432111 11 1223333455553 567888889999
Q ss_pred hcCCceeeeccchhHHHHHHHHHHHHhcCccchh----hHHHHHHHHHHHHH
Q 018069 272 DRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLG----GVIGASLIIAGLYL 319 (361)
Q Consensus 272 ~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~----~~iG~~lil~g~~l 319 (361)
++.+.+..=.+..+.++++.+.|.++++|+=+.. .++|+++++.|.++
T Consensus 217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999987655 45688888887654
No 40
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.21 E-value=2.9e-10 Score=93.44 Aligned_cols=138 Identities=24% Similarity=0.303 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhC-----C-ChhHHHHHHHHHHHHHHHHHHHhhcCCcccccc---c------cchH
Q 018069 184 GCICLIGHCLFWSSWIVLQSPVLKKY-----P-ARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQF---H------SGWE 248 (361)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~------~~~~ 248 (361)
|.++++.+.++.+++.++.|+..++. . ++..+..+....+.+.+.|...+.|........ . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999998873 2 889999999999999999998887664311110 0 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069 249 IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL 322 (361)
Q Consensus 249 ~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~ 322 (361)
+..++..|++ ....+...+..+++.+|...++...+..+...+.+++++||+++..+++|+++.+.|.+++.+
T Consensus 81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5555555554 567777788999999999999999999999999999999999999999999999999988754
No 41
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.18 E-value=1.5e-09 Score=93.16 Aligned_cols=227 Identities=15% Similarity=0.155 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Q 018069 72 LQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLY 151 (361)
Q Consensus 72 ~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~ 151 (361)
+.+..++++.. ....+..-++.|++-..-.++..+--+-+.+.+.++-+.|-++. +.++..+..+|.++..+.
T Consensus 107 rtY~~la~~t~-gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLA 179 (367)
T KOG1582|consen 107 RTYVILAFLTV-GTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLA 179 (367)
T ss_pred hHhhhhHhhhh-hccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhc
Confidence 33445555543 56667778888988888888888888889999999988888886 999999999999998864
Q ss_pred cCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC-ChhHHHHHHHHHHHHHHHHH
Q 018069 152 KGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP-ARLSVVSYSCFFSLMQFSAI 230 (361)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~ 230 (361)
+. ......+..|+.+.-.|-++-|.-.-.+++.++..+ ...++.++....+.+.+...
T Consensus 180 Ds---------------------~~sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~ 238 (367)
T KOG1582|consen 180 DS---------------------QTSPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAP 238 (367)
T ss_pred cc---------------------ccCCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHH
Confidence 33 223345568999999999999988888888888776 45678888888888887777
Q ss_pred HHhhcCCcccccc---ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhH
Q 018069 231 GAYFERDSAAWQF---HSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGV 307 (361)
Q Consensus 231 ~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~ 307 (361)
....+.-...|+. .+.......++.+. .+.+++.....-++..++.+++.+....--+++++++++|..+++....
T Consensus 239 mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~ 317 (367)
T KOG1582|consen 239 MVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYV 317 (367)
T ss_pred HHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHh
Confidence 7655443333332 22223333333333 4667777777778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccccc
Q 018069 308 IGASLIIAGLYLVVLGKDEE 327 (361)
Q Consensus 308 iG~~lil~g~~l~~~~~~~~ 327 (361)
-|..+++.|+++..+.++.+
T Consensus 318 ~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 318 WSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred hhhHHHHHHHHhhcccCCCC
Confidence 99999999999998877443
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.13 E-value=1.3e-09 Score=99.60 Aligned_cols=138 Identities=12% Similarity=0.183 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccc-c-cccchHHHHHHHHHH
Q 018069 180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAW-Q-FHSGWEIFCVFYSGL 257 (361)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~~~ 257 (361)
+..+|++++++++++|+...+..|.. .+.+ +....+++...+.+.+.+...... +.... + ..+...+ .....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKI-FMLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHH-HHHHHHH
Confidence 45689999999999999999999764 5554 899999999999887776655322 11111 0 0112222 2333555
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
++.+..+.++++++++.+++.++.+.++.|++..++++++++|+++..+++|+++.+.|+.+..
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999999999999999999999987764
No 43
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.12 E-value=2e-09 Score=98.21 Aligned_cols=136 Identities=13% Similarity=0.045 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN 85 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (361)
..|.++.++++++|+...+..|...++ .++.... +...++.+++.++...... ....++..+...+..|+++..++
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~~-~~~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~l~lgv~~t~~~ 222 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGAE-HGPATVA-IGSLIAALIFVPIGALQAG--EALWHWSILPLGLAVAILSTALP 222 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999988764 7777764 4456666666666654322 11234455555678888888889
Q ss_pred HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh
Q 018069 86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLY 151 (361)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~ 151 (361)
+.+|++++++.+++.++++..++|+++.++++++++|+++.. +++|..+.+.|++.....
T Consensus 223 ~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 223 YSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999997 999999999999998653
No 44
>PRK13499 rhamnose-proton symporter; Provisional
Probab=99.10 E-value=1.3e-07 Score=86.75 Aligned_cols=302 Identities=13% Similarity=0.030 Sum_probs=178.8
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHH-HHHHHHHHHHHHHH--Hhhc---cCCCCCCHHHHHHH
Q 018069 1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLY-RNIIAVIVLVPFAY--FLEK---KDRPTLTYSFLLQF 74 (361)
Q Consensus 1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~-r~~~~~l~l~~~~~--~~~~---~~~~~~~~~~~~~~ 74 (361)
|.++...|+++.+++.++||..+.-.|. .+. .+ +|.-+. -.+++.+ +.|+.. ...+ ......+.+.+..-
T Consensus 1 m~~~~~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~-wE~~W~v~gi~~wl-~~~~~~g~~~~~~f~~~~~~~~~~~~~~~ 76 (345)
T PRK13499 1 MSNAIILGIIWHLIGGASSGSFYAPFKK-VKK-WS-WETMWSVGGIFSWL-ILPWLIAALLLPDFWAYYSSFSGSTLLPV 76 (345)
T ss_pred CCchhHHHHHHHHHHHHHhhcccccccc-cCC-Cc-hhHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHhcCHHHHHHH
Confidence 5667788999999999999999999997 342 33 232221 1111111 111110 1001 11223456677777
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCcchhhhhc-cchhHHHHHHHHHhhhccc---ccccccccchhhHHHHHHHHHHHHHH
Q 018069 75 FLLGLVGITLNQGSYIFGLDNTSPIFASAVE-NAVPAVTFIMAVLLRIEQI---HLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~pi~~~lla~~~l~e~~---~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
++.|++- .+++..++.++++...+.+..+. .++-+...++..++++|=. +. +......+|+++.++|+.+...
T Consensus 77 ~l~G~~W-~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t--~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 77 FLFGALW-GIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLAT--NGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHH-HhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHcccccccccc--chHHHHHHHHHHHHHHHHHHHH
Confidence 7778775 58999999999999999997554 7789999999999998743 22 2223478889999999999874
Q ss_pred hcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHH-------HHHHhHhhhCCChhHHHHHHHH--
Q 018069 151 YKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWI-------VLQSPVLKKYPARLSVVSYSCF-- 221 (361)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~-- 221 (361)
.....+++.+ ++ +..+.+..+|++.++++.+.++.|. ...+...+...++.....-+..
T Consensus 154 Ag~~k~~~~~----~~--------~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~ 221 (345)
T PRK13499 154 AGQLKERKMG----IK--------KAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVI 221 (345)
T ss_pred hhhhcccccc----cc--------cccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHH
Confidence 1111111000 00 0234677899999999999999999 3333211111123333333322
Q ss_pred -HHHH-HHHHHHHhh--c-CCccccccc--cchHHHHH----HHHHHHHHHHHHHHHHHHHhcCCceeeec---c-chhH
Q 018069 222 -FSLM-QFSAIGAYF--E-RDSAAWQFH--SGWEIFCV----FYSGLVASAMSFAVQIWVIDRGGPMFVSA---Y-LPVQ 286 (361)
Q Consensus 222 -~~~i-~~~~~~~~~--~-~~~~~~~~~--~~~~~~~l----~~~~~~~~~~~~~l~~~a~~~~~~~~~s~---~-~~~~ 286 (361)
.+.+ ...+..... . ++....... +...++.- +..|+ .-.+++.++..+-++.+...... + +.+.
T Consensus 222 ~~G~~~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ 300 (345)
T PRK13499 222 MGGGAITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFY 300 (345)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHH
Confidence 2322 222222211 1 111111111 11112222 33333 35667777778777775543333 3 3677
Q ss_pred HHHHHHHHHHHhcCccc------hhhHHHHHHHHHHHHHhhcc
Q 018069 287 TMLVAIMATIALGEEFY------LGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 287 pv~~~l~~~~~~ge~~s------~~~~iG~~lil~g~~l~~~~ 323 (361)
.+++.++|. +++|.=+ ...++|++++++|..+....
T Consensus 301 ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 301 VLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred HHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 799999998 5999754 55678999999998877654
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.09 E-value=2.6e-09 Score=96.99 Aligned_cols=134 Identities=18% Similarity=0.259 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHH
Q 018069 185 CICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSF 264 (361)
Q Consensus 185 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 264 (361)
.++.+.+++++|..++..|+..++.+ + ...+....+.+.+.|........ ..++..+ ..++..+..+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~--~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-D--FLWWALLAHSVLLTPYGLWYLAQ-VGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-H--HHHHHHHHHHHHHHHHHHHhccc-CCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 46788999999999999998776643 3 34555566666676666532111 1222222 333444444555678899
Q ss_pred HHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 265 AVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 265 ~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
.++++++++.+++.++++.+++|+++.+++++++||+++..+++|+.+++.|+++....
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~ 136 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS 136 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999998877643
No 46
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.07 E-value=3.6e-09 Score=96.58 Aligned_cols=137 Identities=18% Similarity=0.127 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN 85 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (361)
..|.++.++++++|+......|.... -++.....+++.++.+.+.++............+.+.+......++++..+.
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~ 226 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIA 226 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence 46999999999999999999998644 2455667788888888877776543221111234567778888888877789
Q ss_pred HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
+.+|++++++.+++.++++..+.|++++++++++++|+++.. +++|..+.+.|+++...
T Consensus 227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVTL 285 (292)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997 99999999999998863
No 47
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.06 E-value=8.9e-10 Score=90.22 Aligned_cols=212 Identities=17% Similarity=0.166 Sum_probs=154.1
Q ss_pred HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCC
Q 018069 83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSA 162 (361)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~ 162 (361)
++.++.|..|++.+++++++.+......|+.+++++++++|+.-- ++++.++++.|++++.. -
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay-~---------- 126 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAY-A---------- 126 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEe-c----------
Confidence 467889999999999999999999999999999999999999984 99999999999998863 2
Q ss_pred CcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC--ChhHHHHHHHHHHHH-HHHHHHHhhcCCcc
Q 018069 163 SDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP--ARLSVVSYSCFFSLM-QFSAIGAYFERDSA 239 (361)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~ 239 (361)
+....+...|+.+++.+++..|+|-++-|+.....+ +.-..+....+.-.+ ...|..+......+
T Consensus 127 ------------DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE 194 (290)
T KOG4314|consen 127 ------------DNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVE 194 (290)
T ss_pred ------------cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchH
Confidence 223345679999999999999999999998876543 222222222222222 22222222112222
Q ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069 240 AWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL 319 (361)
Q Consensus 240 ~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l 319 (361)
.++......|..+...+.+. ..-..+.+.++..+.|...++-..........++.++-+-..+.....|..+|+.|.++
T Consensus 195 ~~qsFA~~PWG~l~G~A~L~-lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiL 273 (290)
T KOG4314|consen 195 HLQSFAAAPWGCLCGAAGLS-LAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFIL 273 (290)
T ss_pred HHHHHhhCCchhhhhHHHHH-HHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 33322334577777766653 33445668889999998888888888888888897655556788889999999999877
Q ss_pred hhccc
Q 018069 320 VVLGK 324 (361)
Q Consensus 320 ~~~~~ 324 (361)
.....
T Consensus 274 iiiP~ 278 (290)
T KOG4314|consen 274 IIIPE 278 (290)
T ss_pred eeccc
Confidence 76543
No 48
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.04 E-value=4e-09 Score=94.37 Aligned_cols=136 Identities=13% Similarity=0.192 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCc---cccccccchH-HHHHHHHHHH
Q 018069 183 LGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDS---AAWQFHSGWE-IFCVFYSGLV 258 (361)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~~~~~~ 258 (361)
+|.++.++++++|+...+..|. ..+. ++.++.+++++.+.+.+.+......+.. ...+...... +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4889999999999999999997 4455 4899999999999888776654333211 0111111222 3344555554
Q ss_pred HHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 259 ASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
...++.++++++++.++..++.+.++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999987654
No 49
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.00 E-value=1.3e-08 Score=95.03 Aligned_cols=135 Identities=9% Similarity=0.146 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-HHHHHHHHHHHHHHHHHHHHhhccCC----CCCCHHHHHHHHHHHHHH
Q 018069 7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKL-VFPLYRNIIAVIVLVPFAYFLEKKDR----PTLTYSFLLQFFLLGLVG 81 (361)
Q Consensus 7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~-~~~~~r~~~~~l~l~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~ 81 (361)
.|.+++++++++|+...+..|..... .++. ...++...++.+.+.+......+... ...+.. ....+..++.
T Consensus 189 lG~~l~l~aa~~wa~~~il~~~~~~~-~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~i~y~~i~- 265 (358)
T PLN00411 189 IGGALLTIQGIFVSVSFILQAHIMSE-YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT-LITIVTMAII- 265 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH-HHHHHHHHHH-
Confidence 37889999999999999999987775 6554 55667776666655544444322111 111222 2223444444
Q ss_pred HHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 82 ITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 82 ~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
..+++.+|++++++.+++.+++..++.|++++++++++++|+++++ +++|.++.+.|+.+...
T Consensus 266 t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~------~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 266 TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLG------CLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 3478889999999999999999999999999999999999999997 99999999999999874
No 50
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.94 E-value=7.5e-09 Score=90.56 Aligned_cols=204 Identities=13% Similarity=0.023 Sum_probs=127.4
Q ss_pred CcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCc-----------ccCCCCCCcc
Q 018069 97 SPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPI-----------VYRPNSASDQ 165 (361)
Q Consensus 97 ~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~-----------~~~~~~~~~~ 165 (361)
+........+..++++++..+...+++.+.. ++++.++...|++...+.+.+. ....++..+.
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~ 76 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAK 76 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcc
Confidence 3445566778888889999988888888854 8888888888887643211100 0000000000
Q ss_pred cchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChh-HHHHHHHHHHHHHHHHHHHhhcCCc-cccc-
Q 018069 166 SQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARL-SVVSYSCFFSLMQFSAIGAYFERDS-AAWQ- 242 (361)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~- 242 (361)
.....+...|..+.+.+.++-+...++.++..|+.+... ..+....+.+.+...........+. ....
T Consensus 77 ---------~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (222)
T TIGR00803 77 ---------TLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF 147 (222)
T ss_pred ---------ccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCc
Confidence 112235668888888888888888888888766543111 1122222222222121111111110 0111
Q ss_pred -cccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069 243 -FHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL 319 (361)
Q Consensus 243 -~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l 319 (361)
...+...+.+ ++.+.++..+....+|+.++...+....++++++.+++++++||+++..+++|+.+++.|+++
T Consensus 148 ~~~~~~~~~~~----~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 148 FIGYPTAVWIV----GLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred ccCCchHHHHH----HHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 0001111222 224566777788999999999999999999999999999999999999999999999998765
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.94 E-value=1.9e-08 Score=91.97 Aligned_cols=133 Identities=11% Similarity=0.124 Sum_probs=102.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN 85 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (361)
..|.+++++++++|+...+..|...++ .++....+ ....+.+.+...... ......++..+..++..++. ..++
T Consensus 155 ~~G~~~~l~aa~~~A~~~v~~k~~~~~-~~~~~~~~---~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~-t~~~ 228 (295)
T PRK11689 155 PLSYGLAFIGAFIWAAYCNVTRKYARG-KNGITLFF---ILTALALWIKYFLSP-QPAMVFSLPAIIKLLLAAAA-MGFG 228 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC-CCchhHHH---HHHHHHHHHHHHHhc-CccccCCHHHHHHHHHHHHH-HHHH
Confidence 348899999999999999999997664 77765432 223333333222222 11123455667677766654 5679
Q ss_pred HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
+.+|++++++.+++.++.+.++.|++..++++++++|+++.. +++|.++.+.|+++...
T Consensus 229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999999997 99999999999988864
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.93 E-value=2.2e-08 Score=79.07 Aligned_cols=122 Identities=18% Similarity=0.156 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHH
Q 018069 183 LGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAM 262 (361)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 262 (361)
.|.++.+.+.++.+...++.|+..++.+ +...... . . ...... ......+++|++++.+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~-~~~~~~--------------~~p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----I-AALLAF--------------GLALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----H-HHHHHH--------------hccHHHHHHHHHHHHH
Confidence 4778999999999999999999888765 2221111 0 0 000000 0012246778888999
Q ss_pred HHHHHHHHHhcCCceeeeccchhHHHHHHHHHHH--HhcCccchhhHHHHHHHHHHHHHhhcccc
Q 018069 263 SFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATI--ALGEEFYLGGVIGASLIIAGLYLVVLGKD 325 (361)
Q Consensus 263 ~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~--~~ge~~s~~~~iG~~lil~g~~l~~~~~~ 325 (361)
++.+|.+++++.+.+.+.++....+++..+.++. ++||++|+.+++|+++|++|+++....++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999998888888875 89999999999999999999999875433
No 53
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.88 E-value=1.3e-09 Score=96.29 Aligned_cols=277 Identities=13% Similarity=0.145 Sum_probs=164.2
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHH
Q 018069 1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLV 80 (361)
Q Consensus 1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 80 (361)
|..+...|.++.+.+.+..|.++.+-|....+ ... . ..+......+ ...-+.+..|.+
T Consensus 15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r-~~~---~--------------~~ra~~gg~~----yl~~~~Ww~G~l 72 (335)
T KOG2922|consen 15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKR-AGA---S--------------GLRAGEGGYG----YLKEPLWWAGML 72 (335)
T ss_pred hccCceeeeeehhhccEEEeeehhhhHHHHHH-Hhh---h--------------cccccCCCcc----hhhhHHHHHHHH
Confidence 34445678888888888888888888877664 111 0 0000011111 112356778888
Q ss_pred HHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCC
Q 018069 81 GITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPN 160 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 160 (361)
.+.++..+-|.|..+.|++.++++..+..+..++++..++|||+++. ..+|+.++++|-.+++. +.|.+.+..
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-haP~e~~i~ 145 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-HAPKEQEIE 145 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-ecCcccccc
Confidence 88889999999999999999999999999999999999999999996 99999999999999874 444332211
Q ss_pred CCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC--ChhHHHHHHHHHHHHHHH-------HHH
Q 018069 161 SASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP--ARLSVVSYSCFFSLMQFS-------AIG 231 (361)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~i~~~-------~~~ 231 (361)
+.....+ -..+..+ +.....+...++ +-....+ +++. +.+.......+.|.+... .+-
T Consensus 146 t~~el~~-------~~~~~~F-liy~~~iil~~~--il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~aik 212 (335)
T KOG2922|consen 146 SVEEVWE-------LATEPGF-LVYVIIIILIVL--ILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIK 212 (335)
T ss_pred cHHHHHH-------HhcCccH-HHHHHHHHHHHH--HHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHHH
Confidence 0000000 0001111 111111111111 1111211 1221 223333332222211111 111
Q ss_pred HhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCcc--ch----
Q 018069 232 AYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEEF--YL---- 304 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~~--s~---- 304 (361)
..+.++.+ . ..+..|..++.... |........|+|++..+++.++++++. -..++++-+.++|+|-- +.
T Consensus 213 lt~~g~~q-l--~~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~ 288 (335)
T KOG2922|consen 213 LTFSGNNQ-L--FYPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIA 288 (335)
T ss_pred HHhcCCcc-c--ccHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence 11222222 1 12233444444444 556777778999999999999998886 66777778889998852 33
Q ss_pred hhHHHHHHHHHHHHHhhcc
Q 018069 305 GGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 305 ~~~iG~~lil~g~~l~~~~ 323 (361)
....|+..++.|+++....
T Consensus 289 ~~~~Gf~ti~~G~flL~~~ 307 (335)
T KOG2922|consen 289 GELCGFVTIFLGIFLLHRT 307 (335)
T ss_pred HHHHhHHHhhheeeEeeee
Confidence 3457889999998887533
No 54
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.86 E-value=9e-08 Score=87.66 Aligned_cols=137 Identities=15% Similarity=0.220 Sum_probs=106.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---HHHHHHHHHHHHHHHHHHHHhhcc-----CCCCCCHHHHHHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKL---VFPLYRNIIAVIVLVPFAYFLEKK-----DRPTLTYSFLLQFFLL 77 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~---~~~~~r~~~~~l~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 77 (361)
..|.++.++++++|+...+..|...++ .++. ...++..+++.+.+.......+.. .....+...+..++..
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSH-STRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYL 220 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-cCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHH
Confidence 469999999999999999999987653 3322 333444444443333332222211 1123456778888899
Q ss_pred HHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 78 GLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
|+++..+.+.+|+.++++.++..++.+..+.|++..++++++++|+++.. +++|..+.++|+.+..
T Consensus 221 ~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~------~~iG~~lI~~gv~l~~ 286 (299)
T PRK11453 221 AFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGL------QFLGAVLIMAGLYINV 286 (299)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHHHh
Confidence 98888899999999999999999999999999999999999999999997 9999999999998775
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.82 E-value=5.8e-08 Score=89.09 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=106.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhccCCCC---------CCH-HHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPT---------LTY-SFLLQF 74 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~---------~~~-~~~~~~ 74 (361)
..|.++.++++++|+...+..|...++ +.+|....++....+.+.+.|+....+...... ... ..+...
T Consensus 144 ~~G~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (302)
T TIGR00817 144 WAGFLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVS 223 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHH
Confidence 459999999999999999999987761 389999999999999998888876532111000 000 111112
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 75 FLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
+..+.......+.+++.+++++++..+++...+.|++++++++++++|+++.+ +++|..+++.|+.+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~------~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 224 LVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQ------QVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchh------HHHHHHHHHHHHHHHHH
Confidence 22232223334467778999999999999999999999999999999999997 99999999999998763
No 56
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.77 E-value=5.4e-08 Score=75.58 Aligned_cols=107 Identities=13% Similarity=0.230 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHH
Q 018069 218 YSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIA 297 (361)
Q Consensus 218 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~ 297 (361)
+....+.+..........+............+...+..|++....++.++.++.++.++ .++.+..++|+++.++++++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555542222112222223445566666776556899999999999995 88899999999999999999
Q ss_pred hcCccchhhHHHHHHHHHHHHHhhcccc
Q 018069 298 LGEEFYLGGVIGASLIIAGLYLVVLGKD 325 (361)
Q Consensus 298 ~ge~~s~~~~iG~~lil~g~~l~~~~~~ 325 (361)
++|+++..+++|..++++|+.+..+.+.
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999887654
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.62 E-value=8.5e-07 Score=72.68 Aligned_cols=133 Identities=21% Similarity=0.332 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHHHHHHhhccCCCC----C-------CHHH
Q 018069 8 LHLAMTIFQFGYAGNHVIMRTALNM------GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPT----L-------TYSF 70 (361)
Q Consensus 8 g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~----~-------~~~~ 70 (361)
|.++++.+.++.+...+..|...++ +.++.++..+....+.+.+.+.....++....+ . ..+.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 5678999999999999999998765 589999999999999999999887665433110 0 2244
Q ss_pred HHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHH
Q 018069 71 LLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASV 147 (361)
Q Consensus 71 ~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 147 (361)
+..++..|+++. ..+...+..++++++...+++...-.+.+.++++++++|+++.+ ++.|+.+++.|+++
T Consensus 81 ~~~~~~~~~~~~-~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 81 IFLLILSGLLAF-LYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 455566666654 78889999999999999999999999999999999999999997 99999999999875
No 58
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.58 E-value=1.6e-06 Score=81.15 Aligned_cols=138 Identities=13% Similarity=0.205 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHHHHHHhhccCC-----------CCCCH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNM------GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDR-----------PTLTY 68 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~------~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-----------~~~~~ 68 (361)
..|.+++++++++|+...+..|...++ ..++.....+...++.++++|+....+.... .....
T Consensus 193 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~ 272 (350)
T PTZ00343 193 WLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK 272 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence 469999999999999999999998763 1456666666678888888888763321100 00011
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 69 SFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 69 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
.........+.+...+.+.+.+.+++++++...++...+.|+++.++++++++|+++.. +++|.++++.|+.+.
T Consensus 273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~------~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLL------GYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchH------hHHHHHHHHHHHHHH
Confidence 11111222222223344445557999999999999999999999999999999999997 999999999999876
Q ss_pred H
Q 018069 149 T 149 (361)
Q Consensus 149 ~ 149 (361)
.
T Consensus 347 s 347 (350)
T PTZ00343 347 S 347 (350)
T ss_pred h
Confidence 4
No 59
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.56 E-value=1e-06 Score=77.34 Aligned_cols=140 Identities=13% Similarity=0.180 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccc-cccchHHHHHHHHHHHHH
Q 018069 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQ-FHSGWEIFCVFYSGLVAS 260 (361)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 260 (361)
..|+++++.+-+.|+..-.+.|-+ +..+ +.++..+..+++.+....+.....+....++ ..++..+......++. .
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l-i 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL-I 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH-H
Confidence 479999999999999988887764 4554 7899999999999988877776544333222 2234566666666665 5
Q ss_pred HHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 261 AMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 261 ~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
.....++.+|.......++|.=++++|++.+++|.++++|+++..|++..++..+|+....+..
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~ 146 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL 146 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999999999999999999999999999999988776543
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.56 E-value=1.1e-06 Score=67.59 Aligned_cols=69 Identities=19% Similarity=0.154 Sum_probs=62.5
Q ss_pred HHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 75 FLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 75 ~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
...+++++.+++.++..+++..|.+.+..+.++.++++.+++++++|||++++ +++|+.+.++|++++.
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 33444667789999999999999999999999999999999999999999998 9999999999998874
No 61
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.56 E-value=2e-06 Score=77.98 Aligned_cols=133 Identities=15% Similarity=0.167 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH-HHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPL-YRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL 84 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~-~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 84 (361)
..|.++.++++++|+...+..|... + .++..... +......+...+..... . . .....+.+......|+++...
T Consensus 153 ~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~~~~~~~~g~~~~~i 227 (292)
T COG0697 153 LLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALLLQLLLALLLLLLFFLSG-F-G-APILSRAWLLLLYLGVFSTGL 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHHhcc-c-c-ccCCHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999766 3 67777666 44442233333332211 1 1 245567788888889887767
Q ss_pred hHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 85 NQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 85 ~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
++.++++++++.+++.++++..+.|++..++++++++|+++.+ +++|+.+.+.|+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~------~~~G~~li~~g~~l~~ 286 (292)
T COG0697 228 AYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPA------QLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999997 9999999999998875
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.52 E-value=1.6e-06 Score=78.94 Aligned_cols=128 Identities=17% Similarity=0.206 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHH----HHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNI----IAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVG 81 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (361)
.+|.++.+++++.++......|.. +.+|....+.+.. .+.+++.++ + + .++. ..+..+..+..|++.
T Consensus 151 ~~Gi~~~l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~-~-~~~~-~~~~~~~~~~~Gi~~ 221 (290)
T TIGR00776 151 KKGILLLLMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH---I-L-AKPL-KKYAILLNILPGLMW 221 (290)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH---h-c-ccch-HHHHHHHHHHHHHHH
Confidence 689999999999999999999975 2789988666655 444444433 1 1 1222 233444455588885
Q ss_pred HHHhHHHHHhhcc-CCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchh----hHHHHHHHHHHHHH
Q 018069 82 ITLNQGSYIFGLD-NTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKV----LGTLISVGGASVIT 149 (361)
Q Consensus 82 ~~~~~~~~~~al~-~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~ 149 (361)
.+.+.+|+.+.+ +.+++.++++.+..|+...+.+.+++||+.+++ ++ +|.++.+.|+.++.
T Consensus 222 -~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 222 -GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred -HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 688999999999 999999999999999999999999999999998 88 99999999988874
No 63
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.49 E-value=5.4e-08 Score=82.75 Aligned_cols=278 Identities=16% Similarity=0.137 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018069 7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQ 86 (361)
Q Consensus 7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (361)
..++.+++=++.||..+.+.... |-+|.+...---+-+.++.+.+.+. ..|..+...+..-+..|++. .+++
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~----~~p~~T~~~~iv~~isG~~W-s~GQ 73 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLF----VSPELTLTIFIVGFISGAFW-SFGQ 73 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHhee----ecCccchhhHHHHHHhhhHh-hhhh
Confidence 35788899999999988776543 4568776655554444444444433 23344556656666666664 5899
Q ss_pred HHHHhhccCCCcchhhhhc-cchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcc
Q 018069 87 GSYIFGLDNTSPIFASAVE-NAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQ 165 (361)
Q Consensus 87 ~~~~~al~~~~~~~~~~l~-~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~ 165 (361)
...+.|+++..++.+.++. .++-+-+.+++.+.+||--+..+. ....+++++.++|+.+-.. ++++.+.
T Consensus 74 ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~--IlG~iAliliviG~~lTs~-~~~~nk~------- 143 (288)
T COG4975 74 ANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQI--ILGFIALILIVIGIYLTSK-QDRNNKE------- 143 (288)
T ss_pred hhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhH--HHHHHHHHHHHHhheEeee-ecccccc-------
Confidence 9999999999999998876 568888999999999996666410 0112345555666665542 3322211
Q ss_pred cchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCcccccccc
Q 018069 166 SQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHS 245 (361)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (361)
+++.++..+|....+.+.+.|-.|.++.+... . +.++...-+.....+..+.+... ..+ ...
T Consensus 144 ---------~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~-~~~-----~~~ 205 (288)
T COG4975 144 ---------EENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFF-KME-----KRF 205 (288)
T ss_pred ---------ccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhc-ccc-----cch
Confidence 33456677899999999999999999876552 3 34555555555545544444442 111 112
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhh----HHHHHHHHHHHHHhh
Q 018069 246 GWEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGG----VIGASLIIAGLYLVV 321 (361)
Q Consensus 246 ~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~----~iG~~lil~g~~l~~ 321 (361)
....+.-+.-|++ -.++...+..+.++.+.++.=.+.-+..+++.+=|.++++|+=+..+ ++|+++++.|..+..
T Consensus 206 ~K~t~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 206 NKYTWLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred HHHHHHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 2334444555664 56788888889888888887778888889999999999999987665 468888888866554
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.45 E-value=1.5e-06 Score=66.97 Aligned_cols=67 Identities=15% Similarity=0.172 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 255 SGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 255 ~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
.++++...++.++..++++.+.+.+-.+.++.++++.+++++++||++++.+++|.+++++|+.+..
T Consensus 42 ~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 42 LALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3445677899999999999999999999999999999999999999999999999999999987764
No 65
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.37 E-value=7.6e-06 Score=64.63 Aligned_cols=118 Identities=19% Similarity=0.082 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhH
Q 018069 7 KLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQ 86 (361)
Q Consensus 7 ~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (361)
+++++++++.++-+..-++.|...++ .+..+.... . . ..+... .+ ....+..|+....+++
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~-~g~~~~~~~-~-~---~~~~~~----------~~---p~~~i~lgl~~~~la~ 62 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSR-LPLLSHAWD-F-I---AALLAF----------GL---ALRAVLLGLAGYALSM 62 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhh-CCCccchhH-H-H---HHHHHH----------hc---cHHHHHHHHHHHHHHH
Confidence 47888999999999999999998875 544332221 1 0 000000 00 1124667777778899
Q ss_pred HHHHhhccCCCcchhhhhccchhHHHHHHHHH--hhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 87 GSYIFGLDNTSPIFASAVENAVPAVTFIMAVL--LRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 87 ~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~--~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
.++.+++++.+++.+..+.+..+.++.+.++. ++||+++++ +++|+.+.++|++++.
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 99999999999999999999999888888885 899999997 9999999999999985
No 66
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=98.26 E-value=1.4e-05 Score=68.57 Aligned_cols=135 Identities=11% Similarity=0.007 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHh
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLN 85 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 85 (361)
-.|..+.+.+..+|+.+-+..|...+. .+--.-+..-+.+++++.+|+-....... -..+.....-+..++++..+.
T Consensus 147 p~Gv~~Al~AG~~Wa~YIv~G~r~g~~-~~g~~g~a~gm~vAaviv~Pig~~~ag~~--l~~p~ll~laLgvavlSSalP 223 (292)
T COG5006 147 PVGVALALGAGACWALYIVLGQRAGRA-EHGTAGVAVGMLVAALIVLPIGAAQAGPA--LFSPSLLPLALGVAVLSSALP 223 (292)
T ss_pred HHHHHHHHHHhHHHHHHHHHcchhccc-CCCchHHHHHHHHHHHHHhhhhhhhcchh--hcChHHHHHHHHHHHHhcccc
Confidence 468899999999999999999987754 56667778889999999999986433211 234566666778888888888
Q ss_pred HHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 86 QGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 86 ~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
+.+=..+++..|....+++.++.|.+.++.+++++||+++.. ||.++...+.+..-..
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGST 281 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999997 9999998888777554
No 67
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.19 E-value=4.2e-05 Score=70.27 Aligned_cols=145 Identities=14% Similarity=0.061 Sum_probs=103.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHhhh-CCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHH
Q 018069 180 NWTLGCICLIGHCLFWSSWIVLQSPVLKK-YPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLV 258 (361)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 258 (361)
+...+.+++-.-++|-+...+.+..+.++ .+.|...+++....-.++..+......+. ..+.......|+..+.++++
T Consensus 10 ~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~-~~~~~~~~~~~w~y~lla~~ 88 (334)
T PF06027_consen 10 RFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGF-KKWLKVLKRPWWKYFLLALL 88 (334)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhcccc-ccchhhcchhHHHHHHHHHH
Confidence 33445555555555555555555555444 22566777777666666655555532221 12222233556666677775
Q ss_pred HHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069 259 ASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE 326 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~ 326 (361)
=..+.++.+.|+++++.+.+.++.....++++++++++++++.++.+++|+.+.++|+.+....+..
T Consensus 89 -Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~ 155 (334)
T PF06027_consen 89 -DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL 155 (334)
T ss_pred -HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence 6789999999999999999999999999999999999999999999999999999999888766543
No 68
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.98 E-value=0.00015 Score=58.10 Aligned_cols=132 Identities=16% Similarity=0.132 Sum_probs=99.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHH
Q 018069 184 GCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMS 263 (361)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 263 (361)
..++++.+..+-++......++.++..+++..++..+..+.+.+..+..+.++. ........+|+..+ -|+ .+...
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~-lG~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGL-LGVFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHH-HHHHH
Confidence 357888999999999999999888876689999999999999998888866553 22222233444443 444 45667
Q ss_pred HHHHHHHHhcCCceeeeccch-hHHHHHHHHHHH----HhcCccchhhHHHHHHHHHHHHH
Q 018069 264 FAVQIWVIDRGGPMFVSAYLP-VQTMLVAIMATI----ALGEEFYLGGVIGASLIIAGLYL 319 (361)
Q Consensus 264 ~~l~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~----~~ge~~s~~~~iG~~lil~g~~l 319 (361)
..+.....++.+++....+.. -|.+.+.++|.+ .-++++++.+++|..++++|+++
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 777788899999876665554 488888888886 23467899999999999999763
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.96 E-value=3.3e-05 Score=59.87 Aligned_cols=68 Identities=16% Similarity=0.322 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 257 LVASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 257 ~~~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
+.+..++++++..++|+.+...+=.+ .-+..+.+.++++++|||++++.+++|+.+|++|++......
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 33467899999999999988766554 357888899999999999999999999999999998875443
No 70
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.96 E-value=0.00013 Score=66.92 Aligned_cols=130 Identities=12% Similarity=0.049 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHhHhhhCC-C--hhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018069 193 LFWSSWIVLQSPVLKKYP-A--RLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIW 269 (361)
Q Consensus 193 ~~~a~~~v~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 269 (361)
.++..+.+.++++.++.. . +..+++.++....+...+.......+ . .+...+......++ +..++..+-+.
T Consensus 10 ~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~-~~~~~~~~~~~ 83 (303)
T PF08449_consen 10 GGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--K---SRKIPLKKYAILSF-LFFLASVLSNA 83 (303)
T ss_pred HHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--C---CCcChHHHHHHHHH-HHHHHHHHHHH
Confidence 344557778888777544 3 67788888888888777766643311 1 12233444455555 46788889999
Q ss_pred HHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccccc
Q 018069 270 VIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDEES 328 (361)
Q Consensus 270 a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~~~ 328 (361)
++++.+.....+.....|+..++++.+++|++.+..++++++++.+|+.+....+.+.+
T Consensus 84 al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~ 142 (303)
T PF08449_consen 84 ALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS 142 (303)
T ss_pred HHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence 99999999999999999999999999999999999999999999999999877654433
No 71
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.85 E-value=7.6e-05 Score=67.99 Aligned_cols=119 Identities=16% Similarity=0.243 Sum_probs=87.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCC-hhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069 179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPA-RLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL 257 (361)
Q Consensus 179 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (361)
.+...|..+++.++++.+....++|+..++.+. ...- .. ...+......|+.-..
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~--------------------~~-~~~~~l~~~~W~~G~~--- 58 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA--------------------GS-GGRSYLRRPLWWIGLL--- 58 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--------------------cc-hhhHHHhhHHHHHHHH---
Confidence 356689999999999999999999998766541 0000 00 0011111122222222
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069 258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL 322 (361)
Q Consensus 258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~ 322 (361)
...++..+...|+...+++.++++..+..++..+++..+++|+++...++|+.+++.|..+...
T Consensus 59 -~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 59 -LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred -HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 2345566777899999999999999999999999999999999999999999999999776543
No 72
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.75 E-value=0.016 Score=52.77 Aligned_cols=303 Identities=13% Similarity=0.062 Sum_probs=177.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhc-cC----CCCCCHHHHHHHH
Q 018069 1 MVPERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK-KD----RPTLTYSFLLQFF 75 (361)
Q Consensus 1 m~~~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~~----~~~~~~~~~~~~~ 75 (361)
|...-..|+++..++.++=|..++-.|..-+ .+-...-....+++. +..|+...... +. ....+...+....
T Consensus 1 m~~~ii~Gii~h~iGg~~~~sfy~P~kkvk~--WsWEs~Wlv~gi~sw-li~P~~~a~l~ip~~~~i~~~~~~~~l~~~~ 77 (344)
T PF06379_consen 1 MNSAIILGIIFHAIGGFASGSFYVPFKKVKG--WSWESYWLVQGIFSW-LIVPWLWALLAIPDFFSIYSATPASTLFWTF 77 (344)
T ss_pred CCchHHHHHHHHHHHHHHhhhhccchhhcCC--ccHHHHHHHHHHHHH-HHHHHHHHHHhCCcHHHHHHhCChhHHHHHH
Confidence 5556678999999999999999888886533 443333333444444 34444432211 11 1233445666677
Q ss_pred HHHHHHHHHhHHHHHhhccCCCcchhh-hhccchhHHHHHHHHHhhhccc-ccccccccchhhHHHHHHHHHHHHHHhcC
Q 018069 76 LLGLVGITLNQGSYIFGLDNTSPIFAS-AVENAVPAVTFIMAVLLRIEQI-HLTRKDGIAKVLGTLISVGGASVITLYKG 153 (361)
Q Consensus 76 ~~g~~~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~lla~~~l~e~~-~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 153 (361)
+.|++-. ++...|=.+++|+..+... +...+...+-.++-.++.++-- -..++-.+..++|++++++|+.++-. -|
T Consensus 78 l~G~lWG-IGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~-AG 155 (344)
T PF06379_consen 78 LFGVLWG-IGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK-AG 155 (344)
T ss_pred HHHHHHh-cchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH-HH
Confidence 7888754 7888889999998888764 5556677777777666644210 01122345689999999999999853 22
Q ss_pred C-cccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHh-------hhCCChh----HHHHHHHH
Q 018069 154 P-IVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVL-------KKYPARL----SVVSYSCF 221 (361)
Q Consensus 154 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~-------~~~~~~~----~~~~~~~~ 221 (361)
. .+++.+ . +..+.+..+|.+.++.+.+..|.+++-..... +...+++ ......+.
T Consensus 156 ~~Ke~~~~------~-------~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~ 222 (344)
T PF06379_consen 156 SMKEKELG------E-------EAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLW 222 (344)
T ss_pred Hhhhhhhc------c-------chhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhh
Confidence 1 111110 0 22345677999999999998888777643211 1011122 22334455
Q ss_pred HHHHHHHHHHHhhc---CCcc---cccccc---chHHHHHHHHHHHHHHHHHHHHHHHHhcCCc----eeeeccchhHHH
Q 018069 222 FSLMQFSAIGAYFE---RDSA---AWQFHS---GWEIFCVFYSGLVASAMSFAVQIWVIDRGGP----MFVSAYLPVQTM 288 (361)
Q Consensus 222 ~~~i~~~~~~~~~~---~~~~---~~~~~~---~~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~----~~~s~~~~~~pv 288 (361)
.+.+.....+++.. ++.. +..... ......-+..|+ .-...+++|..+-.+.++ +--.+.+.+..+
T Consensus 223 GGf~tN~~yc~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~-lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl 301 (344)
T PF06379_consen 223 GGFITNLIYCLILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGV-LWYSQFFFYGMGESKLGASGPFSSWAIHMALIVL 301 (344)
T ss_pred hHHHHHHHHHHHHHhhcCCCccccccccccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHH
Confidence 55666666665431 1211 111111 122222233333 245566666666666553 444566778888
Q ss_pred HHHHHHHHHhcCc------cchhhHHHHHHHHHHHHHhhcc
Q 018069 289 LVAIMATIALGEE------FYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 289 ~~~l~~~~~~ge~------~s~~~~iG~~lil~g~~l~~~~ 323 (361)
++-++|. .++|. +-..-++|+.+++.+++++-+.
T Consensus 302 ~snvwGl-~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~G 341 (344)
T PF06379_consen 302 FSNVWGL-ILKEWKGASKKTIRVLVLGIAVLILSVVIVGYG 341 (344)
T ss_pred HHHHHHH-HHHHhccCCcccHHHHHHHHHHHHHHHHHHhcc
Confidence 9999995 47773 3344578999888888776543
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.72 E-value=0.00019 Score=54.87 Aligned_cols=65 Identities=22% Similarity=0.215 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 259 ASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
+...+++++..++|+.+...+=.+ .-+..+...++++++|||++++.+++|+.+|+.|+++....
T Consensus 39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 457888999999999888665444 44678888999999999999999999999999999988643
No 74
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.68 E-value=0.00051 Score=60.87 Aligned_cols=116 Identities=19% Similarity=0.110 Sum_probs=86.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHH
Q 018069 4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGIT 83 (361)
Q Consensus 4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 83 (361)
+..|+++.++++.+.+.......|.. +.+++...+=+.+...+.-..+....++ +...|..++-+.-|++. .
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~~~~---~~~~~~~~lPqaiGm~i~a~i~~~~~~~----~~~~k~~~~nil~G~~w-~ 206 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIPKAF---HVSGWSAFLPQAIGMLIGAFIFNLFSKK----PFFEKKSWKNILTGLIW-G 206 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhc---CCChhHhHHHHHHHHHHHHHHHhhcccc----cccccchHHhhHHHHHH-H
Confidence 34689999999999999999988863 3788887665544333333333332222 12223334456667764 5
Q ss_pred HhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccc
Q 018069 84 LNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLT 127 (361)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~ 127 (361)
.++.+++.+.+....+.+-.+..+.+++..+-+.+++||+-++|
T Consensus 207 ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 207 IGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 88999999999999999999999999999999999999998776
No 75
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.66 E-value=1.2e-05 Score=69.58 Aligned_cols=137 Identities=15% Similarity=0.169 Sum_probs=100.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHH
Q 018069 180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVA 259 (361)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 259 (361)
...+|..+...+ ..+...++..++..... |.......+..-..+..|..++.-... +.+...+.| ++.=|+.
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~v--~gp~g~R~~--LiLRg~m- 106 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQPV--IGPEGKRKW--LILRGFM- 106 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeeee--ecCCCcEEE--EEeehhh-
Confidence 456788888888 88888888888876554 555555666666666666555422221 111111222 2333443
Q ss_pred HHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 260 SAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 260 ~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
+..+..+.++++++.+-+.+.++.+..|+++.+++|.+++|+.|....+|..+.+.|+++..+..
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 45677788899999999999999999999999999999999999999999999999998887543
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.53 E-value=0.0016 Score=49.64 Aligned_cols=62 Identities=11% Similarity=0.071 Sum_probs=55.2
Q ss_pred HHHHhHHHHHhhccCCCcchh-hhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 81 GITLNQGSYIFGLDNTSPIFA-SAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
++.+++.+...+++++|.+.+ ++......+.+.+++.+++||++++. +++|+.+.+.|++.+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 345788889999999999998 56667889999999999999999997 999999999999876
No 77
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.49 E-value=0.0003 Score=53.64 Aligned_cols=110 Identities=12% Similarity=0.119 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhh
Q 018069 13 TIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFG 92 (361)
Q Consensus 13 l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a 92 (361)
++.+++||.++++.|..... .++..-.. |..-.... . -.++++ .+ ++.-.-.+...|++.
T Consensus 2 l~Vg~~WG~Tnpfik~g~~~-~~~~~~~~-~~~~~~~~----L---------l~n~~y---~i--pf~lNq~GSv~f~~~ 61 (113)
T PF10639_consen 2 LLVGILWGCTNPFIKRGSSG-LEKVKASL-QLLQEIKF----L---------LLNPKY---II--PFLLNQSGSVLFFLL 61 (113)
T ss_pred eeehHHhcCchHHHHHHHhh-cCCccchH-HHHHHHHH----H---------HHhHHH---HH--HHHHHHHHHHHHHHH
Confidence 45678999999999998874 65555431 21111111 0 112232 22 222233677889999
Q ss_pred ccCCCcchhhhhc-cchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 93 LDNTSPIFASAVE-NAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 93 l~~~~~~~~~~l~-~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
+...+.+.+.++. ++.=++|++.++++.+|..+++ .++|+.+.+.|+.++
T Consensus 62 L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 62 LGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred HhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 9999999999885 7788999999988877777776 899999999998764
No 78
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.47 E-value=0.0024 Score=51.18 Aligned_cols=138 Identities=12% Similarity=0.100 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHH
Q 018069 182 TLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASA 261 (361)
Q Consensus 182 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 261 (361)
....+.++.+.++-.+..-...++.+...+|+...+..+..+.+.+..+.+..++.. .+.......||..+ -|++ ..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~-~~a~~~~~pwW~~~-GG~l-Ga 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHP-GLAAVASAPWWAWI-GGLL-GA 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCC-chhhccCCchHHHH-ccch-hh
Confidence 366788999999999999998888887777899999999999999998888744332 22222223344332 2232 22
Q ss_pred HHHHHHHHHHhcCCc-eeeeccchhHHHHHHHHHHHHhc----CccchhhHHHHHHHHHHHHHhhc
Q 018069 262 MSFAVQIWVIDRGGP-MFVSAYLPVQTMLVAIMATIALG----EEFYLGGVIGASLIIAGLYLVVL 322 (361)
Q Consensus 262 ~~~~l~~~a~~~~~~-~~~s~~~~~~pv~~~l~~~~~~g----e~~s~~~~iG~~lil~g~~l~~~ 322 (361)
+-...-.....+.++ ........-+.+.++++|.+=+. .+++...++|++++++|+++...
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 222233344555555 44555666688888888876554 56899999999999999655543
No 79
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.43 E-value=0.0022 Score=48.84 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHhcCCceee-eccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 259 ASAMSFAVQIWVIDRGGPMFV-SAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
+..+++++...++|+.+...+ +...-+..+.+.+.++++|||++++.+++|+.+|+.|+....
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 457899999999999887543 444456778889999999999999999999999999988763
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.42 E-value=0.00063 Score=51.02 Aligned_cols=65 Identities=20% Similarity=0.285 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHhcCCcee-eeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 259 ASAMSFAVQIWVIDRGGPMF-VSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~-~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
+...+|.++..++|+.+... .++..-...+.+.+.++++|||++++.+++|..++++|++.....
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 34678999999999988743 355566678888999999999999999999999999999887643
No 81
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.40 E-value=0.00054 Score=53.14 Aligned_cols=67 Identities=27% Similarity=0.206 Sum_probs=58.6
Q ss_pred HHHHHHHhHHHHHhhccCCCcchhhhh-ccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 78 GLVGITLNQGSYIFGLDNTSPIFASAV-ENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
.+..+.+++.++..++++.|.+.+-.+ ....-+.+.+++.++++|++++. +++|+.+.++|++.+-.
T Consensus 36 ~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 36 MLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhhc
Confidence 344456789999999999999999655 47899999999999999999997 99999999999988853
No 82
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.37 E-value=0.0027 Score=50.87 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-ccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069 9 HLAMTIFQFGYAGNHVIMRTALNMGVS-KLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG 87 (361)
Q Consensus 9 ~l~~l~~~~~~~~~~~~~k~~~~~~~~-p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (361)
.++.+++..+-+....+.....+. .. |+..+++-+..+.+++..+....+++..+..+ +.-++...-|+++. ....
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~-~~p~w~~lGG~lG~-~~V~ 79 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLS-SVPWWAYLGGLLGV-FFVL 79 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhc-cCChHHhccHHHHH-HHHH
Confidence 456677777777777777776665 55 99999999999999988888776654332222 22344455777765 6777
Q ss_pred HHHhhccCCCcchhhhhccc-hhHHHHHHHHH----hhhcccccccccccchhhHHHHHHHHHHH
Q 018069 88 SYIFGLDNTSPIFASAVENA-VPAVTFIMAVL----LRIEQIHLTRKDGIAKVLGTLISVGGASV 147 (361)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~-~pi~~~lla~~----~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 147 (361)
+..+.....+++.+..+.-. +-+...++..+ .-|++++++ +.+|+.+.++|+.+
T Consensus 80 ~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 80 SNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 77888999999988776655 56666666665 346777776 99999999999863
No 83
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.36 E-value=0.00076 Score=51.61 Aligned_cols=67 Identities=13% Similarity=0.116 Sum_probs=57.8
Q ss_pred HHHHHHHhHHHHHhhccCCCcchhhhh-ccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 78 GLVGITLNQGSYIFGLDNTSPIFASAV-ENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
.++++.+++.++..++++.|.+.+-.+ ....-+.+.+++++++||++++. +++|+.+.++|++++-.
T Consensus 36 ~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 36 TIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHhc
Confidence 344456788888999999999998655 56888999999999999999997 99999999999999853
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.36 E-value=0.00083 Score=50.88 Aligned_cols=64 Identities=22% Similarity=0.290 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHhcCCceee-eccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhc
Q 018069 259 ASAMSFAVQIWVIDRGGPMFV-SAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVL 322 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~~-s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~ 322 (361)
+...+++++..++|+.+...+ +...-+..+.+.+.++++|||++++.+++|+.++++|++....
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 457899999999999887543 4445577888899999999999999999999999999888753
No 85
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.35 E-value=0.0024 Score=58.93 Aligned_cols=137 Identities=17% Similarity=0.117 Sum_probs=93.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHH--H--HHHhhcCCc-cccccccchHHHHHHH
Q 018069 180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFS--A--IGAYFERDS-AAWQFHSGWEIFCVFY 254 (361)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~--~~~~~~~~~-~~~~~~~~~~~~~l~~ 254 (361)
+...|+++.+++++|++.+.+-.|+ .|+.+ ++.. |- ..+.+..+ | ...+..++. ......+...+..-..
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~--wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWS--WETM-WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCCc--hhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 4568999999999999999999888 55543 3333 22 11211111 1 111112221 1223334555666666
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceeeeccch-hHHHHHHHHHHHHhcCcc---c----hhhHHHHHHHHHHHHHhhc
Q 018069 255 SGLVASAMSFAVQIWVIDRGGPMFVSAYLP-VQTMLVAIMATIALGEEF---Y----LGGVIGASLIIAGLYLVVL 322 (361)
Q Consensus 255 ~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~ge~~---s----~~~~iG~~lil~g~~l~~~ 322 (361)
.|++ -.+++..+..++|+.+.+...++.. ++-+++.+++.+++||-. + ....+|.+++++|+.+..+
T Consensus 79 ~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 79 FGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 6775 6789999999999999988887765 478899999999999755 2 2356899999999999877
No 86
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.00075 Score=50.64 Aligned_cols=63 Identities=22% Similarity=0.160 Sum_probs=56.7
Q ss_pred HHHHhHHHHHhhccCCCcchh-hhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 81 GITLNQGSYIFGLDNTSPIFA-SAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
++..++.+.-.+++++|.+.+ ++......+.+.+.++++++|+++.. +++++.+.++|++.+-
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGLK 102 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHhh
Confidence 345788889999999999988 67778899999999999999999997 9999999999999874
No 87
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.24 E-value=0.0013 Score=49.78 Aligned_cols=65 Identities=11% Similarity=0.090 Sum_probs=57.0
Q ss_pred HHHHHHhHHHHHhhccCCCcchh-hhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 79 LVGITLNQGSYIFGLDNTSPIFA-SAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~-~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
..++..++.+...+++..|.+.+ ++......+.+.+++.+++||++++. +++|+.+.+.|++.+-
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhhh
Confidence 33455788889999999999998 56667899999999999999999997 9999999999999874
No 88
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=97.23 E-value=0.001 Score=60.57 Aligned_cols=137 Identities=18% Similarity=0.248 Sum_probs=109.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHHHHHHHHHHH-HHHHHhhccCC---C--CCCHHHHHHHH
Q 018069 5 RAKLHLAMTIFQFGYAGNHVIMRTALN---MGVSKLVFPLYRNIIAVIVLV-PFAYFLEKKDR---P--TLTYSFLLQFF 75 (361)
Q Consensus 5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~---~~~~p~~~~~~r~~~~~l~l~-~~~~~~~~~~~---~--~~~~~~~~~~~ 75 (361)
+..|....+.+.+..+...++.|.... +.++++.......-++.+.++ |+....+.... . ..+... ....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~-~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTF-LILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhh-HHHH
Confidence 467999999999999999999999884 248999999888888888888 88766544322 1 112222 2333
Q ss_pred HHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 76 LLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 76 ~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
+..++.. ..|...|..+..+++-..++...+--+++...++++++|++++. +..|..++++|+.+-.
T Consensus 240 ~~sv~~f-~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~------n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLAF-LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFL------NALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHH-HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchh------hHHHHHHHHHHHHHHH
Confidence 4445544 66778889999999999999999999999999999999999996 9999999999999865
No 89
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=97.06 E-value=0.0042 Score=56.71 Aligned_cols=141 Identities=13% Similarity=0.148 Sum_probs=109.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcC---CCccHHHHHHHHHHHHHHHHHHHHhhc---cCCCCCCHHHHHHHHHH
Q 018069 4 ERAKLHLAMTIFQFGYAGNHVIMRTALNMG---VSKLVFPLYRNIIAVIVLVPFAYFLEK---KDRPTLTYSFLLQFFLL 77 (361)
Q Consensus 4 ~~~~g~l~~l~~~~~~~~~~~~~k~~~~~~---~~p~~~~~~r~~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 77 (361)
+...|.++.+++++++|...++.|.-.+++ +|--.+-.+-.++..++++|..+.... +...-.+..+...+++.
T Consensus 244 ~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 244 RPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFN 323 (416)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHh
Confidence 347899999999999999999999877652 333334445556677777766665443 22222334455567888
Q ss_pred HHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 78 GLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 78 g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
++++..++-++|..|.-.+++-.+++-.+++....++.-.++.+.++++. .++|.+..++|-+++..
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI 390 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence 89999999999999999999999999999999999999999977777774 99999999999888864
No 90
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.05 E-value=0.0016 Score=57.52 Aligned_cols=80 Identities=15% Similarity=0.189 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069 247 WEIFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE 326 (361)
Q Consensus 247 ~~~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~ 326 (361)
.+.+.+..-++ ...+...+.+.++++.+|+...++..+..++++++++++++.+++..||++..++..|+.+.......
T Consensus 15 ~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 15 KDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 34444445555 36788899999999999999999999999999999999999999999999999999999988765544
Q ss_pred c
Q 018069 327 E 327 (361)
Q Consensus 327 ~ 327 (361)
.
T Consensus 94 ~ 94 (244)
T PF04142_consen 94 S 94 (244)
T ss_pred c
Confidence 3
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.03 E-value=0.0041 Score=46.19 Aligned_cols=55 Identities=18% Similarity=0.203 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhcCCceeeecc-chhHHHHHHHHHHHHhcCccchhhHHHHHHH
Q 018069 259 ASAMSFAVQIWVIDRGGPMFVSAY-LPVQTMLVAIMATIALGEEFYLGGVIGASLI 313 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~~s~~-~~~~pv~~~l~~~~~~ge~~s~~~~iG~~li 313 (361)
+...++.++.+++|+.+.+.+=.+ .-+..+...+.+.+++||++|+.+++|+.+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 467889999999999999887444 4588899999999999999999999999876
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.66 E-value=0.013 Score=43.55 Aligned_cols=54 Identities=19% Similarity=0.081 Sum_probs=32.9
Q ss_pred HHHHhHHHHHhhccCCCcchhh-hhccchhHHHHHHHHHhhhcccccccccccchhhHHHH
Q 018069 81 GITLNQGSYIFGLDNTSPIFAS-AVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLI 140 (361)
Q Consensus 81 ~~~~~~~~~~~al~~~~~~~~~-~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l 140 (361)
+...+..++..++++.|.+.+- +...+..+.+.+++.+++||+++++ ++.|+.+
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 4567888999999999999995 4557899999999999999999997 8988875
No 93
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.55 E-value=0.02 Score=50.57 Aligned_cols=189 Identities=11% Similarity=0.007 Sum_probs=116.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069 8 LHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG 87 (361)
Q Consensus 8 g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (361)
|++..+++++++|.+++-.|..-. -|++.+-++.+....+.-+....... .+ +.+.+.++-|.+- +.++.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~--gDg~~fQw~~~~~i~~~g~~v~~~~~---~p----~f~p~amlgG~lW-~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDT--GDGFFFQWVMCSGIFLVGLVVNLILG---FP----PFYPWAMLGGALW-ATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccC--CCcHHHHHHHHHHHHHHHHHHHHhcC---CC----cceeHHHhhhhhh-hcCce
Confidence 567889999999999999996543 58888877777666666555554422 11 2334455556664 57888
Q ss_pred HHHhhccCCCcchhhhhccchhHHH-HHHHHH-hhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCC------
Q 018069 88 SYIFGLDNTSPIFASAVENAVPAVT-FIMAVL-LRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRP------ 159 (361)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~~pi~~-~lla~~-~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~------ 159 (361)
+-.-.++....+....+-++.-+++ -..+++ +++++...- +...+..+|++++++|..+....+.+...+.
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~-~~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~ 149 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVP-SSPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEET 149 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceecccccccc-chhHHHHHHHHHHHHHHHheeeecCCCCCcccccccc
Confidence 8889999999999988887744433 333433 444433221 2234678899999999888764343321111
Q ss_pred --CCC-CcccchhhhhccCc--------ccchhHHHHHHHHHHHHHHHHHHHHHHhHhhh
Q 018069 160 --NSA-SDQSQSQMLLLGDT--------KEKNWTLGCICLIGHCLFWSSWIVLQSPVLKK 208 (361)
Q Consensus 160 --~~~-~~~~~~~~~~~~~~--------~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 208 (361)
..+ ..+.. .+..+.++ ...+...|+.+++++++.|+...+=.....++
T Consensus 150 ~~~~~~~~~~~-~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 150 PLSIEDVIEIE-DDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred ccccccccccc-cccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhC
Confidence 000 00110 00000001 11246789999999999999988777665444
No 94
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.50 E-value=0.003 Score=54.40 Aligned_cols=133 Identities=14% Similarity=0.058 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHH
Q 018069 183 LGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAM 262 (361)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 262 (361)
.+.+++++=++.|+..-....|. ..+|.+.+.-+.+.+.++.+.+.++..+. .+...+..-+..|.+ -.+
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~---GG~p~qQ~lGtT~GALifaiiv~~~~~p~------~T~~~~iv~~isG~~-Ws~ 71 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKF---GGKPYQQTLGTTLGALIFAIIVFLFVSPE------LTLTIFIVGFISGAF-WSF 71 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeec---CCChhHhhhhccHHHHHHHHHHheeecCc------cchhhHHHHHHhhhH-hhh
Confidence 35678888899999877765443 22466666666666766666666642211 122344445556664 568
Q ss_pred HHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCccchhhHH----HHHHHHHHHHHhhcccc
Q 018069 263 SFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEEFYLGGVI----GASLIIAGLYLVVLGKD 325 (361)
Q Consensus 263 ~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~~s~~~~i----G~~lil~g~~l~~~~~~ 325 (361)
++..++++++..+.+++.++..- +-+-+.+++.+.|+|..+..+.+ ..++++.|+++..++++
T Consensus 72 GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 72 GQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 99999999999999999998775 78888999999999999887753 45667778777766554
No 95
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.14 E-value=0.32 Score=44.56 Aligned_cols=142 Identities=15% Similarity=0.068 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhCC---ChhHHHHHHHHHHHHHHHHHHHhhcCC-ccccc-------cccchHHHH
Q 018069 183 LGCICLIGHCLFWSSWIVLQSPVLKKYP---ARLSVVSYSCFFSLMQFSAIGAYFERD-SAAWQ-------FHSGWEIFC 251 (361)
Q Consensus 183 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~-------~~~~~~~~~ 251 (361)
.=.+..+...+-++......|...++.. .+.+..+..-..-.++.....+..+.. ...+. ...+.+...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3445555556666666666666444332 345666666666666666665543211 01110 011112333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcccc
Q 018069 252 VFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKD 325 (361)
Q Consensus 252 l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~ 325 (361)
+..-+. ..++...+++.++.+.+|+...+.+.+..+.++++..++++++++..||...++...|+.+.+....
T Consensus 95 ~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~ 167 (345)
T KOG2234|consen 95 VSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSL 167 (345)
T ss_pred HHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCC
Confidence 333333 3567777899999999999999999999999999999999999999999999999999999985443
No 96
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.09 E-value=0.01 Score=52.44 Aligned_cols=132 Identities=15% Similarity=0.065 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHH
Q 018069 184 GCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMS 263 (361)
Q Consensus 184 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 263 (361)
|.+.++.|+++++...+=.||.-.. |++....++.....+......+..+.+ .+ . .+.++. |. .-..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~~g--Dg~~fQw~~~~~i~~~g~~v~~~~~~p--~f--~----p~amlg-G~-lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFDTG--DGFFFQWVMCSGIFLVGLVVNLILGFP--PF--Y----PWAMLG-GA-LWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEeccCC--CcHHHHHHHHHHHHHHHHHHHHhcCCC--cc--e----eHHHhh-hh-hhhcC
Confidence 5678899999999999987775322 577777777666666666555543221 11 0 111111 11 12223
Q ss_pred HHHHHHHHhcCCceeeec-cchhHHHHHHHHHHH-HhcCc---c--chhhHHHHHHHHHHHHHhhcccccc
Q 018069 264 FAVQIWVIDRGGPMFVSA-YLPVQTMLVAIMATI-ALGEE---F--YLGGVIGASLIIAGLYLVVLGKDEE 327 (361)
Q Consensus 264 ~~l~~~a~~~~~~~~~s~-~~~~~pv~~~l~~~~-~~ge~---~--s~~~~iG~~lil~g~~l~~~~~~~~ 327 (361)
..+-.-.+|..+-...-. -...+.+.+...+-+ +||++ + .+..++|.+++++|..++..-|.+.
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 333334444444332222 244577777777755 56553 2 4667899999999988887655444
No 97
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.84 E-value=0.03 Score=48.75 Aligned_cols=58 Identities=14% Similarity=-0.083 Sum_probs=52.6
Q ss_pred HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHH
Q 018069 83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGAS 146 (361)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 146 (361)
+....+....+++.+....++...+.++++.+++.++++|+++.. ++.|+.+.+.|+.
T Consensus 163 a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~ 220 (222)
T TIGR00803 163 VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATF 220 (222)
T ss_pred HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeE
Confidence 456677888999999999999999999999999999999999997 9999999988864
No 98
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.75 E-value=0.038 Score=42.25 Aligned_cols=108 Identities=8% Similarity=0.019 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHH
Q 018069 190 GHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAMSFAVQIW 269 (361)
Q Consensus 190 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~ 269 (361)
+.+++|+..+-+.||..+..++...- . +....... .+ ..|-..+ ....+..+-..|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~----Ll--------------~n~~y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF----LL--------------LNPKYII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH----HH--------------HhHHHHH--HHHHHHHHHHHHHH
Confidence 35788999999999988766522221 1 11111111 11 1111111 22235667778889
Q ss_pred HHhcCCceeeeccc-hhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHH
Q 018069 270 VIDRGGPMFVSAYL-PVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYL 319 (361)
Q Consensus 270 a~~~~~~~~~s~~~-~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l 319 (361)
.+.+.+-+.+.++. .+.-+++++.++++.+|..+...++|+.+++.|+.+
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 99999999999995 889999999998877777888999999999999764
No 99
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.69 E-value=0.0049 Score=55.26 Aligned_cols=123 Identities=18% Similarity=0.277 Sum_probs=90.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069 178 EKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL 257 (361)
Q Consensus 178 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (361)
..++..|.++++.+.+..+...++.||..++.. . .. .-. .+++ ..... . ...+.|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~---~~------------~ra-~~gg---~~yl~-~---~~Ww~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A---SG------------LRA-GEGG---YGYLK-E---PLWWAGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h---hc------------ccc-cCCC---cchhh-h---HHHHHHH
Confidence 456678999999999999999999888776643 1 00 000 1111 11111 1 1222345
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
+...++-..-+.|....+++.+++++.++.+.+++++..+++|++++...+||++.++|........
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 5566777777788888999999999999999999999999999999999999999999976665433
No 100
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=95.34 E-value=0.16 Score=45.38 Aligned_cols=137 Identities=12% Similarity=0.118 Sum_probs=106.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhccCCC-----CCCHHHHHHHHHHH
Q 018069 5 RAKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRP-----TLTYSFLLQFFLLG 78 (361)
Q Consensus 5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~g 78 (361)
...|++++....+.=|+.+..-...... +++++.+.+.-.+...+.-.....-. ...++ +..++.++-+++..
T Consensus 170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~q-g~~~~av~F~~~hp~~~~Di~l~s 248 (327)
T KOG1581|consen 170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQ-GHLLPAVSFIKEHPDVAFDILLYS 248 (327)
T ss_pred chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcC-CCCchHHHHHHcChhHHHHHHHHH
Confidence 4568888888888777777666555543 58899999988888887766664322 22222 34567777788999
Q ss_pred HHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 79 LVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
.++. .++.+.|+-++.-.+-.-+.+..+-=++..+++.+.++.++++. ||.|+.+.+.|+.+=.
T Consensus 249 ~~ga-vGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~------q~~g~~iVFg~i~l~~ 312 (327)
T KOG1581|consen 249 TCGA-VGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSE------QWLGVLIVFGGIFLEI 312 (327)
T ss_pred Hhhh-hhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchh------hccCeeeehHHHHHHH
Confidence 9875 78888888898877777788888899999999999999999996 9999999999988754
No 101
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.30 E-value=0.29 Score=39.39 Aligned_cols=140 Identities=14% Similarity=0.050 Sum_probs=83.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHH
Q 018069 5 RAKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITL 84 (361)
Q Consensus 5 ~~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 84 (361)
+.-..+..+.+..+-.....+.....+..-+|..-.+.-+..+.+++..+.+..++.......++..++.+.-|++|. .
T Consensus 3 ~~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa-~ 81 (150)
T COG3238 3 MYLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGA-I 81 (150)
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhh-h
Confidence 344566667777777777666666555423599999999999988888888774443332222333445556666654 3
Q ss_pred hHHHHHhhccCCCcchhhh-hccchhHHHHHHHHHhhh-cccccccccccchhhHHHHHHHHHHHH
Q 018069 85 NQGSYIFGLDNTSPIFASA-VENAVPAVTFIMAVLLRI-EQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 85 ~~~~~~~al~~~~~~~~~~-l~~~~pi~~~lla~~~l~-e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
.-..-........++.... ...-+-+...++..+=.. + .+|+.+..+++|+.+.++|++++
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~---~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGV---PKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCC---CcCCCCHHHHHHHHHHHHHHHHh
Confidence 3334445555555555543 334455555555554332 2 12233445999999999995554
No 102
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.10 E-value=0.71 Score=41.74 Aligned_cols=137 Identities=13% Similarity=0.145 Sum_probs=104.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhc-c----CC-CCCCHHHHHHHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEK-K----DR-PTLTYSFLLQFFLLG 78 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~-~----~~-~~~~~~~~~~~~~~g 78 (361)
..|+.++....+.-+......|...+. +.+.+.++++..+.+.+.+......... + .. .......+..+.+.+
T Consensus 156 ~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lSc 235 (314)
T KOG1444|consen 156 LRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSC 235 (314)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHH
Confidence 458899999999999999999988765 4778888999988888776666643221 1 00 011234566778888
Q ss_pred HHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 79 LVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
+++. +-.++.+++.+..++...++.....-..+.+...++.+++.++- ..+|+.++++|-++-.
T Consensus 236 v~gf-~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~------n~~gll~~~~ggv~Y~ 299 (314)
T KOG1444|consen 236 VMGF-GISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFL------NVIGLLVGFFGGVLYS 299 (314)
T ss_pred HHHH-HHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechh------hhHHHHHHhhhhhHHh
Confidence 8877 55667788999999999888886677777777777878888885 9999999999988764
No 103
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=93.95 E-value=0.18 Score=37.41 Aligned_cols=116 Identities=20% Similarity=0.184 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccHH--HHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 018069 10 LAMTIFQFGYAGNHVIMRTALNMGVSKLVF--PLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFFLLGLVGITLNQG 87 (361)
Q Consensus 10 l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~--~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 87 (361)
.-++...++||...++.|.... |.+..-- .-+|.+.. +.+.. ..+|+++..+.+ +. .+..
T Consensus 6 ~~lvaVgllWG~Tnplirrgs~-g~~~v~~~~~k~~~~lq-----------e~~tl-~l~w~Y~iPFll----Nq-cgSa 67 (125)
T KOG4831|consen 6 DKLVAVGLLWGATNPLIRRGSL-GWDKVKSSSRKIMIALQ-----------EMKTL-FLNWEYLIPFLL----NQ-CGSA 67 (125)
T ss_pred HHHHHHHHHHccccHHHHHHHh-hHhhccCchHHHHHHHH-----------HHHHH-HHhHHHHHHHHH----HH-hhHH
Confidence 3467788999999999998765 2322211 11111110 01001 123344333222 22 4567
Q ss_pred HHHhhccCCCcchhhhhccc-hhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 88 SYIFGLDNTSPIFASAVENA-VPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 88 ~~~~al~~~~~~~~~~l~~~-~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
+||.-+...+.+.+..+.+. .-.|+.+.+.. ++|+..-+ ..++|..+..+|+.+++
T Consensus 68 ly~~tLa~a~islavpv~nsltfafta~~G~~-LGE~~~g~-----~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 68 LYYLTLASAPISLAVPVTNSLTFAFTAIFGKA-LGEETQGG-----LALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHhcCCceeeeeecchhHHHHHHHHHHH-hccccccc-----eeehhhhHHhhhhhhee
Confidence 88899999999999877765 66667777764 57777666 48999999999987753
No 104
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=93.30 E-value=0.85 Score=41.80 Aligned_cols=141 Identities=15% Similarity=0.080 Sum_probs=85.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhc-CC-ccccccccchHHHHHHHHHH
Q 018069 180 NWTLGCICLIGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFE-RD-SAAWQFHSGWEIFCVFYSGL 257 (361)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~~~~ 257 (361)
+...|+++..+++++.+.+.+=.||. |+.+ -...-..+.+++-++.-.+..... ++ .......+...++.....|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~Ws-WEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGWS-WESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCcc-HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 45689999999999999999998884 5553 223333334444333322222211 22 12233334455666666777
Q ss_pred HHHHHHHHHHHHHHhcCCceeee-ccchhHHHHHHHHHHHHhcC-------ccchhhHHHHHHHHHHHHHhhcc
Q 018069 258 VASAMSFAVQIWVIDRGGPMFVS-AYLPVQTMLVAIMATIALGE-------EFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 258 ~~~~~~~~l~~~a~~~~~~~~~s-~~~~~~pv~~~l~~~~~~ge-------~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
+ =.++-..|-.++|+++.+... +..-+..+++.++--++.|+ +-....++|.++.++|+.+..+.
T Consensus 82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A 154 (344)
T PF06379_consen 82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA 154 (344)
T ss_pred H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence 5 567778888999999875543 33334555566655444332 22345678999999998887654
No 105
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=92.51 E-value=0.36 Score=41.59 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=65.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 69 SFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 69 ~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
..++.+..+++.+. +++.+.+.-..+-++-.-+++..+--+|+++.+.++++.+++.| ||+|..+.+.|...-
T Consensus 239 ~~~~~l~l~ai~s~-LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 239 YVFWDLTLLAIASC-LGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHHHHHH-hhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhH
Confidence 44555677777764 88889999999999999999999999999999999999999998 999999999998876
Q ss_pred HH
Q 018069 149 TL 150 (361)
Q Consensus 149 ~~ 150 (361)
+.
T Consensus 312 ~~ 313 (337)
T KOG1580|consen 312 VV 313 (337)
T ss_pred hh
Confidence 54
No 106
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=91.77 E-value=0.079 Score=44.23 Aligned_cols=63 Identities=21% Similarity=0.284 Sum_probs=57.3
Q ss_pred HHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 262 MSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 262 ~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
.+.++|..++++++|+.++.+..-+-.+..+++++++|+++....++..++.+.|++...+.+
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 466788999999999999999999999999999999999999999999999999988776543
No 107
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=90.21 E-value=1.6 Score=37.51 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhccC----CCCCCHHHHHHHHHHHHHHH
Q 018069 8 LHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEKKD----RPTLTYSFLLQFFLLGLVGI 82 (361)
Q Consensus 8 g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~ 82 (361)
|++++...++.-+..-...|.-.+. ....++..++..+++..+++.+-+..+... -...+.....+++..|++..
T Consensus 156 GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~sv 235 (309)
T COG5070 156 GYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSV 235 (309)
T ss_pred ceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHh
Confidence 5555656555555555555544331 266788899999999888777766543211 11334555667888888865
Q ss_pred HHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 83 TLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 83 ~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
+-..+--++++-++....+++..+.-.-.++-+.++++|+.+.. .+.++.+++....+-.
T Consensus 236 -giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~------si~sillGflsg~iYa 295 (309)
T COG5070 236 -GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIYA 295 (309)
T ss_pred -hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHHH
Confidence 45567778899999999999999999999999999999999996 8999999888776654
No 108
>PRK02237 hypothetical protein; Provisional
Probab=87.28 E-value=2.9 Score=31.42 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=38.6
Q ss_pred eeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 279 VSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 279 ~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
.+...-.-.+.+.++++.+-|++|+...++|..+.++|+.+..+..
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3455666788899999999999999999999999999987775544
No 109
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=86.48 E-value=0.065 Score=46.63 Aligned_cols=140 Identities=13% Similarity=0.019 Sum_probs=101.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhHhhh-CCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHH
Q 018069 179 KNWTLGCICLIGHCLFWSSWIVLQSPVLKK-YPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGL 257 (361)
Q Consensus 179 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 257 (361)
...+.|..++=.-.+|-.........+.++ .+.|...++.....-+++..++.++.... -...|...+.+++
T Consensus 14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~-------~~~~~~hYilla~ 86 (336)
T KOG2766|consen 14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKY-------IKAKWRHYILLAF 86 (336)
T ss_pred hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHH-------HHHHHHHhhheeE
Confidence 344556555555455555555555555555 44677888888887788888877753211 1123555556666
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccccc
Q 018069 258 VASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGKDE 326 (361)
Q Consensus 258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~~~ 326 (361)
+ -.=+.++..+|.|+++-+.++.+.....+...+++|++++.+-.+.++.|.++.++|+.+....+-.
T Consensus 87 ~-DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~ 154 (336)
T KOG2766|consen 87 V-DVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVH 154 (336)
T ss_pred E-eecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeec
Confidence 4 4566667789999999999999999999999999999999999999999999999998887765543
No 110
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=85.35 E-value=4.3 Score=36.68 Aligned_cols=117 Identities=15% Similarity=0.160 Sum_probs=78.6
Q ss_pred hhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccc-cccccchH-HHHHHHHHHHHHHHHHHHHHHHHhcCCceeeeccch
Q 018069 207 KKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAA-WQFHSGWE-IFCVFYSGLVASAMSFAVQIWVIDRGGPMFVSAYLP 284 (361)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~-~~~l~~~~~~~~~~~~~l~~~a~~~~~~~~~s~~~~ 284 (361)
+..+=|+.++.+....-...........+..... ....++.+ .-.+.-.|+ +++.-..+-|+++++++.+..++.-.
T Consensus 40 ~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlYTM~KS 118 (349)
T KOG1443|consen 40 KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLYTMTKS 118 (349)
T ss_pred cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeeeeeccc
Confidence 3444455666655555444444333333222111 11122222 222334444 57788888999999999999999999
Q ss_pred hHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 285 VQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 285 ~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
..++|..+++.++-=|++++....=..+|-+|+++..++.
T Consensus 119 Ssi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 119 SSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 9999999999998889999998888888888888777654
No 111
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=83.50 E-value=1.8 Score=32.48 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=37.9
Q ss_pred eccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 280 SAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 280 s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
+...-.-.+.+.++++.+-|++|+...++|..+.++|+.+..+..
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 344556678899999999999999999999999999988776554
No 112
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=82.36 E-value=2.9 Score=37.13 Aligned_cols=141 Identities=19% Similarity=0.189 Sum_probs=98.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHHHhhc----cCCCCC-CHHHHHHHHHHHH
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAYFLEK----KDRPTL-TYSFLLQFFLLGL 79 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~~~~~----~~~~~~-~~~~~~~~~~~g~ 79 (361)
..|.++-.++.+.-+.+.+..|..... +=.-+.+.++..+.+.++++|....... ...+.. .++.|..+.+.|+
T Consensus 184 ~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsgl 263 (347)
T KOG1442|consen 184 WIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGL 263 (347)
T ss_pred hhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHH
Confidence 578999999999999999999965543 1234667888889999999998876542 111222 5677777788888
Q ss_pred HHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcC
Q 018069 80 VGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKG 153 (361)
Q Consensus 80 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 153 (361)
+|...+.. -.+=++-+++-..-+-..--...-.+++..+++|..+.- .|.+-++.+.|...-...++
T Consensus 264 fgF~mgyv-Tg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~l------wwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 264 FGFAMGYV-TGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGL------WWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHhhhe-eeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhh------eeeeeEEEEehhHHHHHHHH
Confidence 77644432 223344455555444444456677789999999998884 88888888888887665444
No 113
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=81.83 E-value=1.4 Score=39.61 Aligned_cols=132 Identities=11% Similarity=0.018 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCC--------cc---ccccccchHHHHHHHHHH
Q 018069 189 IGHCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERD--------SA---AWQFHSGWEIFCVFYSGL 257 (361)
Q Consensus 189 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~---~~~~~~~~~~~~l~~~~~ 257 (361)
+++.+||+.+-..+|-..|+...+ ....+=+..+.+....+..+.-+. +. +..+.++..+.....-|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLP-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCcc-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 456788888888877766544312 122333333333333222221111 11 112223334444444555
Q ss_pred HHHHHHHHHHHHHHhcCCceeeeccchh-HHHHHHHHHHHHhcCccc--hhhHHHHHHHHHHHHHhhcc
Q 018069 258 VASAMSFAVQIWVIDRGGPMFVSAYLPV-QTMLVAIMATIALGEEFY--LGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 258 ~~~~~~~~l~~~a~~~~~~~~~s~~~~~-~pv~~~l~~~~~~ge~~s--~~~~iG~~lil~g~~l~~~~ 323 (361)
+ --++..+..+++...+.+..-++... ..+++.++.++ ++.+.+ ..-+.|..++++++++....
T Consensus 81 v-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~a 147 (336)
T PF07168_consen 81 V-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAAA 147 (336)
T ss_pred h-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHHH
Confidence 4 44677788888888877666655533 44445556654 344433 34566888888888776543
No 114
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=80.13 E-value=2.2 Score=38.03 Aligned_cols=65 Identities=11% Similarity=0.055 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHhcCCceeeeccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhcc
Q 018069 259 ASAMSFAVQIWVIDRGGPMFVSAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLG 323 (361)
Q Consensus 259 ~~~~~~~l~~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~ 323 (361)
|-..+-.+.+.++..++++...++.-...+|+-+++..+++.+++..||.|+..+.+|+.++...
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 34455667778888888888888888889999999999999999999999999999998877543
No 115
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=79.74 E-value=0.57 Score=41.37 Aligned_cols=50 Identities=6% Similarity=0.001 Sum_probs=0.0
Q ss_pred hccCCCcchhhhhccchhHHHHHHHH-HhhhcccccccccccchhhHHHHHHHHHH
Q 018069 92 GLDNTSPIFASAVENAVPAVTFIMAV-LLRIEQIHLTRKDGIAKVLGTLISVGGAS 146 (361)
Q Consensus 92 al~~~~~~~~~~l~~~~pi~~~lla~-~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 146 (361)
-+.-.+-+...+++++..++++++-. +++|+|+=.- +..+++++.++-.+
T Consensus 43 imsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCP-----LGlLCiilimi~lL 93 (381)
T PF05297_consen 43 IMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCP-----LGLLCIILIMIVLL 93 (381)
T ss_dssp --------------------------------------------------------
T ss_pred HHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCc-----chHHHHHHHHHHHH
Confidence 34445555556666665555444433 3345444332 34455544444333
No 116
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=75.85 E-value=16 Score=32.57 Aligned_cols=110 Identities=19% Similarity=0.121 Sum_probs=72.1
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhccCC-----CCCCHHHHHHHHHHHHHHHHHhHHHHHhhccCCCcchhhhhccch
Q 018069 34 VSKLVFPLYRNIIAVIVLVPFAYFLEKKDR-----PTLTYSFLLQFFLLGLVGITLNQGSYIFGLDNTSPIFASAVENAV 108 (361)
Q Consensus 34 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~~~~~~~~~l~~~~ 108 (361)
-+..+++++-+.++..+++..+.....-.. ...+++.+.+.++.+..+. ++...-..=++.-.+..+..+...-
T Consensus 218 ~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gy-lG~~~VLalI~~fGA~~aatvTTaR 296 (367)
T KOG1582|consen 218 ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGY-LGIVFVLALIKLFGALIAATVTTAR 296 (367)
T ss_pred CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhH-hhHHHHHHHHHHhchhHHHHHHHhH
Confidence 466778888888888776665543221110 1234555556665555544 3333222233445666777777777
Q ss_pred hHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 109 PAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 109 pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
-.+|.+++++++.++++.+ ...+..+...|+.+=+.
T Consensus 297 KavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 297 KAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMY 332 (367)
T ss_pred hHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcc
Confidence 8899999999999999996 77788888899888653
No 117
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=74.42 E-value=54 Score=27.94 Aligned_cols=32 Identities=9% Similarity=0.161 Sum_probs=20.9
Q ss_pred HHHHHHHhcCccchhhHHHHHHHHH--HHHHhhc
Q 018069 291 AIMATIALGEEFYLGGVIGASLIIA--GLYLVVL 322 (361)
Q Consensus 291 ~l~~~~~~ge~~s~~~~iG~~lil~--g~~l~~~ 322 (361)
-.+|..++++-.-+...+|..+.++ |.+....
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~ 166 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAMVGAIVLAR 166 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4457777888777788888776653 4444443
No 118
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=69.27 E-value=1.3e+02 Score=30.04 Aligned_cols=36 Identities=17% Similarity=0.107 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHHhcCccchhhHH-HHHHHHHHHHHh
Q 018069 285 VQTMLVAIMATIALGEEFYLGGVI-GASLIIAGLYLV 320 (361)
Q Consensus 285 ~~pv~~~l~~~~~~ge~~s~~~~i-G~~lil~g~~l~ 320 (361)
..|+-+.++|.+.-.-..+....+ |+++++.+.+..
T Consensus 355 ~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 355 GMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 356666666654332233323333 444444444333
No 119
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=69.23 E-value=38 Score=25.51 Aligned_cols=33 Identities=15% Similarity=0.079 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHH
Q 018069 108 VPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGAS 146 (361)
Q Consensus 108 ~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~ 146 (361)
+-.+.++++.+++||++++. .+.|..+.+.++.
T Consensus 72 tL~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~ 104 (108)
T PF04342_consen 72 TLVVFAPFSVFYLGEPLKWN------YLWAFLCILGAVY 104 (108)
T ss_pred hhheeHHHHHHHhCCCccHH------HHHHHHHHHHhhh
Confidence 34455677889999999996 6666665554443
No 120
>PF03595 SLAC1: Voltage-dependent anion channel; InterPro: IPR004695 Two members of the Tellurite-Resistance/Dicarboxylate Transporter (TDT) family have been functionally characterised. One is the TehA protein of Escherichia coli which has been implicated in resistance to tellurite; the other is the Mae1 protein of Schizosaccharomyces pombe which functions in the uptake of malate and other dicarboxylates by a proton symport mechanism. These proteins exhibit 10 putative transmembrane a-helical spanners (TMSs).; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3M76_A 3M7C_A 3M7E_A 3M74_A 3M7B_A 3M71_A 3M72_A 3M77_A 3M7L_A 3M75_A ....
Probab=64.75 E-value=1.1e+02 Score=27.96 Aligned_cols=78 Identities=12% Similarity=0.036 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHH-------HHHHHHh-H
Q 018069 134 KVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSS-------WIVLQSP-V 205 (361)
Q Consensus 134 ~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~-------~~v~~~~-~ 205 (361)
.+.++.++..|+..... +-+ .........|..+..++.+.+.. -.+..++ .
T Consensus 6 ~~f~~~mGtg~l~~~~~-~~~--------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~ 64 (330)
T PF03595_consen 6 AWFGMVMGTGGLSNLLY-LLP--------------------YHFGGLAILSEVLFILALILFLVLLVLYLLRWIRYPKAF 64 (330)
T ss_dssp GGGHHHHHHHHHHHHHH-TTT--------------------TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHH--------------------HhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 78899999988888852 221 11233445666666666666655 2222222 2
Q ss_pred hhhCCChhHHHHHHHHHHHHHHHHHHH
Q 018069 206 LKKYPARLSVVSYSCFFSLMQFSAIGA 232 (361)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~i~~~~~~~ 232 (361)
.++..+|....++.....+...+....
T Consensus 65 ~~el~~p~~~~f~~t~~m~~~~l~~~~ 91 (330)
T PF03595_consen 65 KAELRHPVRSSFFPTFPMALMLLAAFI 91 (330)
T ss_dssp HHHHHSTTGGGGGGHHHHHHHHHHHHH
T ss_pred HHHhcCCcccchHHHHHHHHHHHHHHH
Confidence 223335666666655555555554444
No 121
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=63.88 E-value=18 Score=27.00 Aligned_cols=45 Identities=22% Similarity=0.200 Sum_probs=37.3
Q ss_pred eccchhHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHhhccc
Q 018069 280 SAYLPVQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 280 s~~~~~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
+..+-.-.+.+.++.+.+-|..|+...++|..+.++|+.+..+..
T Consensus 62 AAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 62 AAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 345566778899999999999999999999999999977665543
No 122
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=63.60 E-value=8.4 Score=28.88 Aligned_cols=30 Identities=20% Similarity=0.309 Sum_probs=25.2
Q ss_pred HHHHHHHhcCccchhhHHHHHHHHHHHHHh
Q 018069 291 AIMATIALGEEFYLGGVIGASLIIAGLYLV 320 (361)
Q Consensus 291 ~l~~~~~~ge~~s~~~~iG~~lil~g~~l~ 320 (361)
..++.++++|++++....|.++++++++..
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 456778899999999999999999886643
No 123
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=61.90 E-value=5.3 Score=36.06 Aligned_cols=130 Identities=12% Similarity=-0.005 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhcc------CC-------CCCCHHHHHHHHHHH
Q 018069 12 MTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEKK------DR-------PTLTYSFLLQFFLLG 78 (361)
Q Consensus 12 ~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~~------~~-------~~~~~~~~~~~~~~g 78 (361)
|+++.+|||+.....|++..++- ..+...+-+.++.++...+.-..-.. .. .+.++.....-+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 45778999999999999877532 22345666666665554444322111 11 133455555555555
Q ss_pred HHHHHHhHHHHHhhccCCCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHH
Q 018069 79 LVGITLNQGSYIFGLDNTSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASV 147 (361)
Q Consensus 79 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~l 147 (361)
++ ..+++++..+|+.+...+.+-++.....++.-..--.++..|++.-. .-..|+.+.++.+++
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfld~~~n~a~----iLF~GV~cf~iAI~l 143 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFLDPKINRAE----ILFPGVACFLIAIIL 143 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeeccCCCCCce----EEEccHHHHHHHHHH
Confidence 55 45889999999999888888776654433333333334455554310 133455544444443
No 124
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=61.00 E-value=29 Score=26.07 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhcCCceeeeccch-hHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHh
Q 018069 262 MSFAVQIWVIDRGGPMFVSAYLP-VQTMLVAIMATIALGEEFYLGGVIGASLIIAGLYLV 320 (361)
Q Consensus 262 ~~~~l~~~a~~~~~~~~~s~~~~-~~pv~~~l~~~~~~ge~~s~~~~iG~~lil~g~~l~ 320 (361)
.+-.+|+.-+++.+-+.+.++.+ +.-.++.+.|..+-.|...-..+.|..+++.|+.+.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 34556677788888877776654 577888888876444556677889999999998764
No 125
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=59.82 E-value=1.3e+02 Score=27.06 Aligned_cols=132 Identities=14% Similarity=0.100 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHHHHHHHHHHHH-----Hhh--ccC---CCCC---CHHHHH
Q 018069 7 KLHLAMTIFQFGYAGNHVIMRTALNM-GVSKLVFPLYRNIIAVIVLVPFAY-----FLE--KKD---RPTL---TYSFLL 72 (361)
Q Consensus 7 ~g~l~~l~~~~~~~~~~~~~k~~~~~-~~~p~~~~~~r~~~~~l~l~~~~~-----~~~--~~~---~~~~---~~~~~~ 72 (361)
-|+.++.++.+.-+...+.-....+. |=++-+..++.......+++...- +.. +.. .|.. -+..|.
T Consensus 164 iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~ 243 (330)
T KOG1583|consen 164 IGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWV 243 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHH
Confidence 46666667777766666666665553 568899999999888776655431 000 000 0111 112223
Q ss_pred HHHHHHHHHHHHhHHHHHhhccC----CCcchhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 73 QFFLLGLVGITLNQGSYIFGLDN----TSPIFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 73 ~~~~~g~~~~~~~~~~~~~al~~----~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
+++. .. +.+..-..+... +++-.+++...+-=.+..+++.+.++.++++. .|+|..+.++|.++.
T Consensus 244 yLl~-n~----L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~------h~lGa~lVF~Gt~~f 312 (330)
T KOG1583|consen 244 YLLF-NV----LTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPW------HWLGAALVFFGTLLF 312 (330)
T ss_pred HHHH-HH----HHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHH------HHHHHHHHHHHHHHH
Confidence 3222 21 222222222222 45556677777788899999999999999997 999999999999987
Q ss_pred H
Q 018069 149 T 149 (361)
Q Consensus 149 ~ 149 (361)
.
T Consensus 313 a 313 (330)
T KOG1583|consen 313 A 313 (330)
T ss_pred H
Confidence 6
No 126
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=58.82 E-value=62 Score=26.44 Aligned_cols=53 Identities=17% Similarity=0.152 Sum_probs=34.5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhHhh-----hCCChhHHHHHHHHHHHHHHHHH
Q 018069 178 EKNWTLGCICLIGHCLFWSSWIVLQSPVLK-----KYPARLSVVSYSCFFSLMQFSAI 230 (361)
Q Consensus 178 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~ 230 (361)
+.+.......++.+++.|++..++-..+.+ +.|.|+.-..+.++.+.++.+.+
T Consensus 127 ~~~f~qsv~~gf~a~lGfslvmvlfA~iRER~~~advP~~frG~~ialitagLmSlaF 184 (193)
T COG4657 127 GHNFLQSVVYGFGAALGFSLVMVLFAAIRERLALADVPAPFRGAAIALITAGLMSLAF 184 (193)
T ss_pred hhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHhcCCCCCCCcchHHHHHHHHHHHH
Confidence 345667788899999999998887654433 34455655566666665555443
No 127
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.20 E-value=38 Score=25.04 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=26.6
Q ss_pred HHHHHHHhcCccchhhHHHHHHHHHHHHHhh
Q 018069 291 AIMATIALGEEFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 291 ~l~~~~~~ge~~s~~~~iG~~lil~g~~l~~ 321 (361)
..++.+.++|++.+..+.|..++++|+....
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 4567888999999999999999999987654
No 128
>PRK02237 hypothetical protein; Provisional
Probab=52.87 E-value=22 Score=26.88 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=31.0
Q ss_pred cchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 106 NAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 106 ~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
....+...+-.+.+-++|++.. +++|..++++|+.++.+
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIMY 105 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhee
Confidence 3455555677788878888886 99999999999999863
No 129
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=52.80 E-value=23 Score=28.06 Aligned_cols=16 Identities=25% Similarity=0.522 Sum_probs=9.3
Q ss_pred hhHHHHHHHHHHHHHh
Q 018069 305 GGVIGASLIIAGLYLV 320 (361)
Q Consensus 305 ~~~iG~~lil~g~~l~ 320 (361)
..++|..+++.|++..
T Consensus 88 ~~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 88 SIIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445666677775443
No 130
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=51.50 E-value=1.8e+02 Score=28.22 Aligned_cols=15 Identities=20% Similarity=0.399 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHhh
Q 018069 307 VIGASLIIAGLYLVV 321 (361)
Q Consensus 307 ~iG~~lil~g~~l~~ 321 (361)
+.|+.+++.+++...
T Consensus 417 ~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 417 LMGVMIIACTLPVAF 431 (476)
T ss_pred HHHHHHHHHHHHHHh
Confidence 345555555544433
No 131
>PF15102 TMEM154: TMEM154 protein family
Probab=51.29 E-value=12 Score=29.85 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHhhccccccc
Q 018069 307 VIGASLIIAGLYLVVLGKDEES 328 (361)
Q Consensus 307 ~iG~~lil~g~~l~~~~~~~~~ 328 (361)
++++++++..++++.+.++|+.
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHHHHHHHheeEEeeccc
Confidence 3445555566666665555444
No 132
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=50.26 E-value=1.6e+02 Score=25.09 Aligned_cols=16 Identities=6% Similarity=-0.170 Sum_probs=7.2
Q ss_pred hHHHHHhhccCCCcch
Q 018069 85 NQGSYIFGLDNTSPIF 100 (361)
Q Consensus 85 ~~~~~~~al~~~~~~~ 100 (361)
.+...+.....+++..
T Consensus 159 ~w~~~~~~~~~lp~~i 174 (206)
T PF06570_consen 159 LWIVIFVLTSFLPPVI 174 (206)
T ss_pred HHHHHHHHHHHccccC
Confidence 3444444444455543
No 133
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=49.80 E-value=1.3e+02 Score=26.57 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=25.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhC
Q 018069 177 KEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKY 209 (361)
Q Consensus 177 ~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~ 209 (361)
.......|.+|+......|+.=....|+..|..
T Consensus 122 ~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktk 154 (243)
T KOG1623|consen 122 ERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTK 154 (243)
T ss_pred ceeeeeeehhhhhhhHHhhhccHHhhhhheecC
Confidence 344556899999999999988777777766654
No 134
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.01 E-value=24 Score=26.56 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=31.7
Q ss_pred cchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 106 NAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 106 ~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
....+...+-.+.+-++|++.. +++|..++++|+.++.+
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheEe
Confidence 4456666777788878888886 99999999999999863
No 135
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=44.33 E-value=1.1e+02 Score=29.89 Aligned_cols=56 Identities=11% Similarity=0.026 Sum_probs=37.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCCC--hhHHHHHHHHHHHHHHHHHHHh
Q 018069 178 EKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYPA--RLSVVSYSCFFSLMQFSAIGAY 233 (361)
Q Consensus 178 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~ 233 (361)
+.+...|.+....+.+.-....++.+++.+..++ .....-.....++...+|+..+
T Consensus 283 ~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~ 340 (493)
T KOG1330|consen 283 NATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFL 340 (493)
T ss_pred ccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHH
Confidence 3455677778888888888888888887775553 2334445555666666666554
No 136
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=43.81 E-value=4.1e+02 Score=27.94 Aligned_cols=44 Identities=20% Similarity=0.039 Sum_probs=29.8
Q ss_pred chhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 99 IFASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 99 ~~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
+.+.++..+.|+-.+.++.+...+|.+.+ .+.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 45577888999999999998876654332 455555555565544
No 137
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=40.86 E-value=22 Score=24.21 Aligned_cols=19 Identities=26% Similarity=0.167 Sum_probs=12.6
Q ss_pred hHHHHHHHHHHHHHhhccc
Q 018069 306 GVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 306 ~~iG~~lil~g~~l~~~~~ 324 (361)
.+++++.+++|.+++..-.
T Consensus 6 iLi~ICVaii~lIlY~iYn 24 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYN 24 (68)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4567777777877765433
No 138
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=40.30 E-value=3.5e+02 Score=26.18 Aligned_cols=129 Identities=11% Similarity=0.035 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHHhhcCCccccccccchHHHHHHHHHHHHHHH----HHHH
Q 018069 191 HCLFWSSWIVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGAYFERDSAAWQFHSGWEIFCVFYSGLVASAM----SFAV 266 (361)
Q Consensus 191 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~l 266 (361)
-.+.|++.-.+...+.++.+ |-..+....+.++++.+.+.... . -..........|.+.+.. +-.+
T Consensus 73 f~i~YG~sKf~~G~~sDr~n-pr~fm~~gLilsai~nil~Gfs~----s-----~~~~~~l~~lng~fQg~Gwpp~~~~i 142 (448)
T COG2271 73 FSITYGVSKFVMGVLSDRSN-PRYFMAFGLILSAIVNILFGFSP----S-----LFLFAVLWVLNGWFQGMGWPPCARTI 142 (448)
T ss_pred HHHHHHHHHHHhhhhcccCC-CceeehHHHHHHHHHHHHHhhhh----H-----HHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34567776666666666665 55666666666666655554410 0 001112222233332111 1111
Q ss_pred HHHHHhcCCceeeecc-------chhHHHHHHHHHHHHhcC-ccchhhHHHHHHHHHHHHHhhccccccccc
Q 018069 267 QIWVIDRGGPMFVSAY-------LPVQTMLVAIMATIALGE-EFYLGGVIGASLIIAGLYLVVLGKDEESKY 330 (361)
Q Consensus 267 ~~~a~~~~~~~~~s~~-------~~~~pv~~~l~~~~~~ge-~~s~~~~iG~~lil~g~~l~~~~~~~~~~~ 330 (361)
..+--++..=...+.- ..+-|+++.+ +++.++- .-...-.-|++.+++|++.....+.+++..
T Consensus 143 ~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~ 213 (448)
T COG2271 143 THWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSE 213 (448)
T ss_pred HHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCcccc
Confidence 1122222222233332 2334444443 5554443 233344568888889988887766665543
No 139
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=40.23 E-value=3.2e+02 Score=25.72 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=14.4
Q ss_pred ccchhhHHHHHHHHHHHHHhh
Q 018069 301 EFYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 301 ~~s~~~~iG~~lil~g~~l~~ 321 (361)
..+..+-+++..+.++++...
T Consensus 162 ~~~~~~s~~~avv~i~~Y~lf 182 (368)
T COG0387 162 NFSLGQSLFVAVVLIALYGLF 182 (368)
T ss_pred cchHhHHHHHHHHHHHHHHHH
Confidence 445667778887777766654
No 140
>PF15345 TMEM51: Transmembrane protein 51
Probab=38.18 E-value=23 Score=30.69 Aligned_cols=23 Identities=17% Similarity=0.322 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHhhccccccccc
Q 018069 308 IGASLIIAGLYLVVLGKDEESKY 330 (361)
Q Consensus 308 iG~~lil~g~~l~~~~~~~~~~~ 330 (361)
.|++|.++.+|+..+.|+|++..
T Consensus 67 ~Gv~LLLLSICL~IR~KRr~rq~ 89 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRRRRQG 89 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 47777888888888766655433
No 141
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=38.09 E-value=20 Score=28.60 Aligned_cols=25 Identities=4% Similarity=0.020 Sum_probs=17.0
Q ss_pred CCceeeeccchhHHHHHHHHHHHHh
Q 018069 274 GGPMFVSAYLPVQTMLVAIMATIAL 298 (361)
Q Consensus 274 ~~~~~~s~~~~~~pv~~~l~~~~~~ 298 (361)
-+....+.+.|+.|+++++++.++.
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~La 96 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAILA 96 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556677888888888876653
No 142
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=36.35 E-value=29 Score=27.03 Aligned_cols=6 Identities=50% Similarity=0.473 Sum_probs=2.2
Q ss_pred HHHHHH
Q 018069 309 GASLII 314 (361)
Q Consensus 309 G~~lil 314 (361)
|+++++
T Consensus 76 GvIg~I 81 (122)
T PF01102_consen 76 GVIGII 81 (122)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 143
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=35.79 E-value=2.8e+02 Score=23.64 Aligned_cols=13 Identities=15% Similarity=0.102 Sum_probs=5.8
Q ss_pred hhHHHHHHHHHHH
Q 018069 135 VLGTLISVGGASV 147 (361)
Q Consensus 135 ~~g~~l~~~Gv~l 147 (361)
+.++...+.|+.-
T Consensus 89 ~~~if~~~~gi~~ 101 (206)
T PF06570_consen 89 FFGIFSLLFGIMG 101 (206)
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 144
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=33.72 E-value=2.1e+02 Score=21.58 Aligned_cols=39 Identities=15% Similarity=0.158 Sum_probs=28.2
Q ss_pred cchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 106 NAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 106 ~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
....+...+-.+++-+.++++. .++|..++++|+.++.+
T Consensus 66 GvyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 66 GVYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF 104 (109)
T ss_pred chHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence 3345555556666666666665 99999999999888863
No 145
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.74 E-value=2.1e+02 Score=21.29 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=23.4
Q ss_pred HHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 111 VTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 111 ~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
+-..++.+.+||++++. .+.+..+...|+..+
T Consensus 82 iFv~Fsvfyl~epl~~~------~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWN------YLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHH------HHHHHHHHHHHHHHh
Confidence 34567889999999997 677766666665554
No 146
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=32.71 E-value=41 Score=24.26 Aligned_cols=28 Identities=29% Similarity=0.290 Sum_probs=21.1
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccccc
Q 018069 301 EFYLGGVIGASLIIAGLYLVVLGKDEES 328 (361)
Q Consensus 301 ~~s~~~~iG~~lil~g~~l~~~~~~~~~ 328 (361)
..++..++|+.++++|..++..+..+++
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pe 31 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRPE 31 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 4678889999999999888875544433
No 147
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=31.49 E-value=2.6e+02 Score=22.82 Aligned_cols=77 Identities=12% Similarity=0.217 Sum_probs=45.9
Q ss_pred hhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhhCC--C
Q 018069 134 KVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKKYP--A 211 (361)
Q Consensus 134 ~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~--~ 211 (361)
.-.+++.+++|.=+++..+--++ ......+.+|-.+.+.+.+..+.....--.+.++.. -
T Consensus 91 ~slAVV~AIFGLElLmvSQvcEd------------------~~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vtl~ 152 (184)
T PF15108_consen 91 GSLAVVVAIFGLELLMVSQVCED------------------AHSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVTLI 152 (184)
T ss_pred HHHHHHHHHHhHHHHHHHHHHhc------------------chhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchhhh
Confidence 56778888999887765332221 224556778888888877766554333222233322 3
Q ss_pred hhHHHHHHHHHHHHHHH
Q 018069 212 RLSVVSYSCFFSLMQFS 228 (361)
Q Consensus 212 ~~~~~~~~~~~~~i~~~ 228 (361)
.+++++|.-+.+.+...
T Consensus 153 GFTL~fWCeFtAsFLfF 169 (184)
T PF15108_consen 153 GFTLMFWCEFTASFLFF 169 (184)
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 56777777666665444
No 148
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=31.30 E-value=3.2e+02 Score=22.97 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=21.3
Q ss_pred HHHHHHHhcCccchhhHHHHHHHHH--HHHHhhc
Q 018069 291 AIMATIALGEEFYLGGVIGASLIIA--GLYLVVL 322 (361)
Q Consensus 291 ~l~~~~~~ge~~s~~~~iG~~lil~--g~~l~~~ 322 (361)
-.+|..++.|-.-+....|..+.++ |.+....
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa~ 165 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLTH 165 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4457778888777888888776653 4444443
No 149
>PF10710 DUF2512: Protein of unknown function (DUF2512); InterPro: IPR019649 Proteins in this entry are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.
Probab=30.42 E-value=2.3e+02 Score=22.54 Aligned_cols=37 Identities=11% Similarity=0.233 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhcCCceeeeccchh
Q 018069 249 IFCVFYSGLVASAMSFAV-QIWVIDRGGPMFVSAYLPV 285 (361)
Q Consensus 249 ~~~l~~~~~~~~~~~~~l-~~~a~~~~~~~~~s~~~~~ 285 (361)
+...+..+++.+.++|.+ =..-+.+.+-..+++....
T Consensus 30 f~~~l~~sl~ltvvaY~iGDl~ILPr~gN~~AtiaD~~ 67 (136)
T PF10710_consen 30 FGDILLISLVLTVVAYLIGDLFILPRTGNIVATIADFG 67 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeCCCChhHHHHHHH
Confidence 444455555556666633 2344666666666555443
No 150
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=30.17 E-value=3.2e+02 Score=22.71 Aligned_cols=33 Identities=9% Similarity=0.061 Sum_probs=16.2
Q ss_pred HHHHHhHhhhCCChhHHHHHHHHHHHHHHHHHHH
Q 018069 199 IVLQSPVLKKYPARLSVVSYSCFFSLMQFSAIGA 232 (361)
Q Consensus 199 ~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 232 (361)
....|+..+|.+ -.....+......+......+
T Consensus 118 ~~~~~~~~~R~~-~i~ag~~v~l~~~~~~l~~~l 150 (194)
T PF07698_consen 118 IFSVRRIRSRSD-IIKAGLLVGLVNALMILALGL 150 (194)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 334455455543 444445555555555554554
No 151
>PF15471 TMEM171: Transmembrane protein family 171
Probab=30.17 E-value=41 Score=29.81 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=17.1
Q ss_pred hhhHHHHHHHHHHHHHhhcccc
Q 018069 304 LGGVIGASLIIAGLYLVVLGKD 325 (361)
Q Consensus 304 ~~~~iG~~lil~g~~l~~~~~~ 325 (361)
..|+.|-.++++|++.....+-
T Consensus 161 slQImGPlIVl~GLCFFVVAHv 182 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHV 182 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeee
Confidence 4689999999999887765443
No 152
>PRK10489 enterobactin exporter EntS; Provisional
Probab=29.77 E-value=4.7e+02 Score=24.50 Aligned_cols=17 Identities=29% Similarity=0.612 Sum_probs=8.9
Q ss_pred hHHHHHHHHHHHHHhhc
Q 018069 306 GVIGASLIIAGLYLVVL 322 (361)
Q Consensus 306 ~~iG~~lil~g~~l~~~ 322 (361)
...|++..+++++....
T Consensus 382 ~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 382 SASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34555555556555443
No 153
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=29.61 E-value=4.6e+02 Score=24.28 Aligned_cols=14 Identities=7% Similarity=0.373 Sum_probs=6.2
Q ss_pred HHHHHHHHHhhhcc
Q 018069 110 AVTFIMAVLLRIEQ 123 (361)
Q Consensus 110 i~~~lla~~~l~e~ 123 (361)
+...++.....+|+
T Consensus 168 ~i~~~~~~~~~~~~ 181 (392)
T PRK10473 168 ILVLLLSLFILKET 181 (392)
T ss_pred HHHHHHHHHHcCCC
Confidence 33334444445554
No 154
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=28.59 E-value=25 Score=27.77 Aligned_cols=20 Identities=10% Similarity=0.112 Sum_probs=13.1
Q ss_pred eeeccchhHHHHHHHHHHHH
Q 018069 278 FVSAYLPVQTMLVAIMATIA 297 (361)
Q Consensus 278 ~~s~~~~~~pv~~~l~~~~~ 297 (361)
+.+.+.|+-|++.++.+.++
T Consensus 69 ~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 69 KAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44556677777777777653
No 155
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=27.42 E-value=1.8e+02 Score=18.93 Aligned_cols=45 Identities=20% Similarity=0.322 Sum_probs=34.4
Q ss_pred hhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhHhhh
Q 018069 134 KVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEKNWTLGCICLIGHCLFWSSWIVLQSPVLKK 208 (361)
Q Consensus 134 ~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~ 208 (361)
..+|..+.++|++++.. -| .|.+..+++....|...-..|+..++
T Consensus 5 ~v~G~~lv~~Gii~~~l-PG-----------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPL-PG-----------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcC-CC-----------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 67888899999888763 22 36777788888888888888877654
No 156
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=25.84 E-value=3.5e+02 Score=21.68 Aligned_cols=29 Identities=7% Similarity=0.106 Sum_probs=24.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhHh
Q 018069 178 EKNWTLGCICLIGHCLFWSSWIVLQSPVL 206 (361)
Q Consensus 178 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~ 206 (361)
+.+.....+..++++..|.-|...+||.-
T Consensus 116 d~~~i~~l~~~li~a~IwipYf~~S~RVK 144 (149)
T PF10754_consen 116 DAEAIRELLRSLIAAAIWIPYFLRSKRVK 144 (149)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 34556788999999999999999988863
No 157
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=25.47 E-value=57 Score=20.15 Aligned_cols=18 Identities=22% Similarity=0.167 Sum_probs=10.1
Q ss_pred cchhhHHHHHHHHHHHHH
Q 018069 302 FYLGGVIGASLIIAGLYL 319 (361)
Q Consensus 302 ~s~~~~iG~~lil~g~~l 319 (361)
|+|..++=.++|+.|++.
T Consensus 2 p~wlt~iFsvvIil~If~ 19 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIFA 19 (49)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 455566655556666533
No 158
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=24.91 E-value=2.9e+02 Score=20.37 Aligned_cols=54 Identities=13% Similarity=0.057 Sum_probs=30.9
Q ss_pred HHHHhcCCceeeeccchhHHHHHHHHHHHH---hcCc-cchhhHHHHHHHHHHHHHhh
Q 018069 268 IWVIDRGGPMFVSAYLPVQTMLVAIMATIA---LGEE-FYLGGVIGASLIIAGLYLVV 321 (361)
Q Consensus 268 ~~a~~~~~~~~~s~~~~~~pv~~~l~~~~~---~ge~-~s~~~~iG~~lil~g~~l~~ 321 (361)
..++|+++...--.+-.+..++++++|.+. .++. +-...|.|+..=+.+..+..
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e 79 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFE 79 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHH
Confidence 567777765555555566666666665542 2332 23334677765566555544
No 159
>PTZ00370 STEVOR; Provisional
Probab=24.29 E-value=1.3e+02 Score=27.13 Aligned_cols=35 Identities=14% Similarity=0.118 Sum_probs=22.7
Q ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhc
Q 018069 25 IMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK 60 (361)
Q Consensus 25 ~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~ 60 (361)
.+..+... +.|.-++.+-.++-++++..+..|..|
T Consensus 246 AAtaAsaa-F~Pygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 246 AASAASSA-FYPYGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred HHHHHHHh-hcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445554 788888888877776666655555444
No 160
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=23.98 E-value=7.8e+02 Score=25.07 Aligned_cols=16 Identities=25% Similarity=0.484 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHh
Q 018069 43 RNIIAVIVLVPFAYFL 58 (361)
Q Consensus 43 r~~~~~l~l~~~~~~~ 58 (361)
...++.+.+..+..|.
T Consensus 276 ~lviG~~~Lv~F~~wE 291 (599)
T PF06609_consen 276 PLVIGFVLLVAFVVWE 291 (599)
T ss_pred hHHHHHHHHHHHHHhh
Confidence 3444444455545444
No 161
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=23.57 E-value=1.2e+02 Score=17.04 Aligned_cols=13 Identities=23% Similarity=0.061 Sum_probs=6.8
Q ss_pred chhhHHHHHHHHH
Q 018069 303 YLGGVIGASLIIA 315 (361)
Q Consensus 303 s~~~~iG~~lil~ 315 (361)
++..++|.+++..
T Consensus 11 ~~~~~~G~~l~~~ 23 (34)
T TIGR01167 11 SLLLLLGLLLLGL 23 (34)
T ss_pred HHHHHHHHHHHHH
Confidence 4555666644444
No 162
>PF06168 DUF981: Protein of unknown function (DUF981); InterPro: IPR009324 This is a family of uncharacterised proteins found in bacteria and archaea.
Probab=23.31 E-value=4.6e+02 Score=22.20 Aligned_cols=108 Identities=12% Similarity=0.074 Sum_probs=47.2
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHH-HHHHHHHHHhHHHHHhhccC-CCcchhhhhccchhHH
Q 018069 34 VSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTLTYSFLLQFF-LLGLVGITLNQGSYIFGLDN-TSPIFASAVENAVPAV 111 (361)
Q Consensus 34 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~al~~-~~~~~~~~l~~~~pi~ 111 (361)
+||.++...-...+.+...-+.....++.+++...+.+.... ..|++.. -. -.+-.+.+ .|-+...++.-..|++
T Consensus 4 iD~L~~~L~~l~~~~~~~ay~~~~~~~~~~~~~~~~~~~~~f~~lG~~~l--it-Gl~~~~TWPLPgsYNIlFgd~~~lf 80 (191)
T PF06168_consen 4 IDPLTLMLFTLGAGLLLIAYYVYKNFRGGRKRSLNRSWAPFFGALGLFAL--IT-GLWGTFTWPLPGSYNILFGDPWLLF 80 (191)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHhHHHHHHHHHHHHH--HH-HHHheeeecCCCcccchHhhhHHHH
Confidence 566666655555555555444443333322223334444433 5555432 11 22233334 3444444444445555
Q ss_pred HHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHH
Q 018069 112 TFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVIT 149 (361)
Q Consensus 112 ~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 149 (361)
-.++-..-+-...+++ .+..++...+.|+..+.
T Consensus 81 Gv~lL~~~~~l~~~~~-----L~~~~~~~~flGl~~iv 113 (191)
T PF06168_consen 81 GVLLLSAGLALYRGWD-----LRPLGIFALFLGLILIV 113 (191)
T ss_pred HHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHH
Confidence 4433222221111122 35556666666655554
No 163
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.28 E-value=5.1e+02 Score=24.32 Aligned_cols=96 Identities=14% Similarity=0.225 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhh--ccCCCCCCHHHHHHHHHHHHHHHHHhHHHHHhhccC
Q 018069 18 GYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLE--KKDRPTLTYSFLLQFFLLGLVGITLNQGSYIFGLDN 95 (361)
Q Consensus 18 ~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~al~~ 95 (361)
+|+.+..+.|.+.++ ..-+......++++.++...+.-+.- |...++..|.+-...+.+-+++ ..+.|.+.+.
T Consensus 200 gWs~slY~i~ql~~n-Lq~Iwieyr~yvLgYvlivgliSfaVCYK~GPp~d~RS~~ilmWtLqli~----lvl~Yfsvq~ 274 (452)
T KOG3817|consen 200 GWSISLYVIKQLADN-LQLIWIEYRDYVLGYVLIVGLISFAVCYKIGPPKDPRSQTILMWTLQLIG----LVLAYFSVQH 274 (452)
T ss_pred cchhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcchhhHHHHHHHHHH----HHHHHHhccc
Confidence 477777788877775 66666666666665544332221111 2222233333333333333332 2334467776
Q ss_pred CCcchhhhhccchhHHHHHHHHHhhhccccc
Q 018069 96 TSPIFASAVENAVPAVTFIMAVLLRIEQIHL 126 (361)
Q Consensus 96 ~~~~~~~~l~~~~pi~~~lla~~~l~e~~~~ 126 (361)
.+++.+. ++..+....+.-+++|
T Consensus 275 p~~a~A~--------iI~~lc~~~l~~pIrw 297 (452)
T KOG3817|consen 275 PSAAIAA--------IIMVLCFVALYFPIRW 297 (452)
T ss_pred HHHHHHH--------HHHHHHHHHHhccHHH
Confidence 6666533 3444455554554444
No 164
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=23.03 E-value=59 Score=29.19 Aligned_cols=23 Identities=30% Similarity=0.605 Sum_probs=18.5
Q ss_pred cchhhHHHHHHHHHHHHHhhccc
Q 018069 302 FYLGGVIGASLIIAGLYLVVLGK 324 (361)
Q Consensus 302 ~s~~~~iG~~lil~g~~l~~~~~ 324 (361)
+|..|+++..++++|+.+..+++
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~~~ 257 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIYRR 257 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999987765433
No 165
>PF09529 Intg_mem_TP0381: Integral membrane protein (intg_mem_TP0381); InterPro: IPR011737 This entry represents a family of hydrophobic proteins with seven predicted transmembrane alpha helices. Members are found in Bacillus subtilis (ywaF), TP0381 from Treponema pallidum (TP0381), Streptococcus pyogenes, Rhodococcus erythropolis, etc.
Probab=22.48 E-value=5e+02 Score=22.27 Aligned_cols=58 Identities=7% Similarity=0.002 Sum_probs=31.6
Q ss_pred HhHHHHHhhccCCCcchhhhhccc-hhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHH
Q 018069 84 LNQGSYIFGLDNTSPIFASAVENA-VPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITL 150 (361)
Q Consensus 84 ~~~~~~~~al~~~~~~~~~~l~~~-~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 150 (361)
+....++...++.+..+.-++.-+ ...+.+.++.+..+|+.- +. ....++.|......
T Consensus 53 i~~~~~~~~~~~~~~~e~LPLhlC~i~~~~~~l~l~~k~~~~~--------~~-~~~~gi~Gai~Ali 111 (225)
T PF09529_consen 53 IILYIWYIYIGYFSLWESLPLHLCRIAMILAALALITKKKKLF--------EY-FYFWGIIGAIQALI 111 (225)
T ss_pred HHHHHHHHhcCCCchhccCCchhhhHHHHHHHHHHHcCcHHHH--------HH-HHHHHHHHHHHHee
Confidence 445556666677777777777766 334444444444333211 33 33456666665543
No 166
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=22.14 E-value=5.8e+02 Score=23.51 Aligned_cols=53 Identities=11% Similarity=0.116 Sum_probs=26.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHh
Q 018069 6 AKLHLAMTIFQFGYAGNHVIMRTALNMGVSKLVFPLYRNIIAVIVLVPFAYFL 58 (361)
Q Consensus 6 ~~g~l~~l~~~~~~~~~~~~~k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~ 58 (361)
.+..+.++.+.+.+...+-+.+...-.+.+-......+.++++++++.+..|.
T Consensus 6 i~l~~~i~g~~lG~~~~p~ll~~~~~~~~~~~~n~~v~~ligai~~~li~~~~ 58 (356)
T COG4956 6 IILLFIIIGAVLGFAVIPELLADLGIQDTAFLNNEYVDALIGAIIFFLISFWF 58 (356)
T ss_pred HHHHHHHHHhhhhHhhHHHHHhhcCcccchhhccHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555333332221123444455666667776666555443
No 167
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=21.55 E-value=42 Score=27.32 Aligned_cols=15 Identities=0% Similarity=0.095 Sum_probs=7.6
Q ss_pred ccchhHHHHHHHHHH
Q 018069 281 AYLPVQTMLVAIMAT 295 (361)
Q Consensus 281 ~~~~~~pv~~~l~~~ 295 (361)
.+.|+-|+++++.+.
T Consensus 79 ~lvYllPLl~li~ga 93 (154)
T PRK10862 79 LLVYMTPLVGLFLGA 93 (154)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555555555543
No 168
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=20.83 E-value=7.7e+02 Score=23.88 Aligned_cols=43 Identities=7% Similarity=0.074 Sum_probs=24.5
Q ss_pred cchhHHHHHHHHHHHH-hcCccchhhHHHHHHHHHHHHHhhcccc
Q 018069 282 YLPVQTMLVAIMATIA-LGEEFYLGGVIGASLIIAGLYLVVLGKD 325 (361)
Q Consensus 282 ~~~~~pv~~~l~~~~~-~ge~~s~~~~iG~~lil~g~~l~~~~~~ 325 (361)
....-++++.++..++ +...+ .....|.++++.|..++.+.++
T Consensus 394 ~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~y~~~~~ 437 (473)
T TIGR00905 394 KALIVGVIACVYSIWLLYAAGL-KYLLLGFILYAPGIIFYGRARK 437 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555554433 33322 3455688888889777765444
No 169
>COG4854 Predicted membrane protein [Function unknown]
Probab=20.77 E-value=2.3e+02 Score=21.56 Aligned_cols=18 Identities=28% Similarity=0.551 Sum_probs=15.3
Q ss_pred chhhHHHHHHHHHHHHHH
Q 018069 133 AKVLGTLISVGGASVITL 150 (361)
Q Consensus 133 ~~~~g~~l~~~Gv~li~~ 150 (361)
.|.+.+..++.|++++.+
T Consensus 73 iqV~~is~Al~gavl~a~ 90 (126)
T COG4854 73 IQVFSISAALGGAVLLAL 90 (126)
T ss_pred EEEEEehHHHHHHHHHHh
Confidence 588889999999999874
No 170
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=20.76 E-value=9.9e+02 Score=25.07 Aligned_cols=20 Identities=30% Similarity=0.179 Sum_probs=10.6
Q ss_pred cchhHHHHHHHHHhhhcccc
Q 018069 106 NAVPAVTFIMAVLLRIEQIH 125 (361)
Q Consensus 106 ~~~pi~~~lla~~~l~e~~~ 125 (361)
...|.+..++..+++.|.++
T Consensus 340 ~~lp~ll~ll~~~~lPESPr 359 (742)
T TIGR01299 340 CAFPCVFAIGALTFMPESPR 359 (742)
T ss_pred HHHHHHHHHHHHHHcCCCHH
Confidence 33455555555555555543
No 171
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=20.67 E-value=9.9e+02 Score=25.06 Aligned_cols=114 Identities=10% Similarity=0.009 Sum_probs=53.9
Q ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhccCCCCC---CHHHHHHHHHHHHHHHHHhHHHHHhhcc------CC----Ccch
Q 018069 34 VSKLVFPLYRNIIAVIVLVPFAYFLEKKDRPTL---TYSFLLQFFLLGLVGITLNQGSYIFGLD------NT----SPIF 100 (361)
Q Consensus 34 ~~p~~~~~~r~~~~~l~l~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~al~------~~----~~~~ 100 (361)
++|+++++.-.+.-.. .+.+.+-..++.+++. ..+.+......|..........|++++. .. +...
T Consensus 625 l~~~~il~~~l~~d~~-~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 703 (755)
T TIGR01647 625 FPPIMVVIIAILNDGT-IMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGN 703 (755)
T ss_pred hhHHHHHHHHHHHhHh-HhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhh
Confidence 6677766666655532 2222111111111111 1233344556666554444555555553 11 1223
Q ss_pred hhhhccchhHHHHHHHHHhhh-cccccccccccchhhHHHHHHHHHHHH
Q 018069 101 ASAVENAVPAVTFIMAVLLRI-EQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 101 ~~~l~~~~pi~~~lla~~~l~-e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
.....++.-+++-.+-.+..| ++..++++|++.-.++.++..+-...+
T Consensus 704 ~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~ 752 (755)
T TIGR01647 704 LQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFI 752 (755)
T ss_pred hHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHH
Confidence 444444444444444444444 666677777777777766665544433
No 172
>PF11361 DUF3159: Protein of unknown function (DUF3159); InterPro: IPR016566 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. However, they are predicted to be integral membrane proteins (with several transmembrane segments).
Probab=20.60 E-value=3.7e+02 Score=22.65 Aligned_cols=72 Identities=13% Similarity=0.097 Sum_probs=39.1
Q ss_pred hhhhhccchhHHHHHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHhcCCcccCCCCCCcccchhhhhccCcccc
Q 018069 100 FASAVENAVPAVTFIMAVLLRIEQIHLTRKDGIAKVLGTLISVGGASVITLYKGPIVYRPNSASDQSQSQMLLLGDTKEK 179 (361)
Q Consensus 100 ~~~~l~~~~pi~~~lla~~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (361)
..+++.+..--.....-++..||+++. -..|.+...+++.+... .|+ .+.
T Consensus 28 ~~aliaA~~~a~~~~v~RL~r~~~~~~-------a~~gl~gV~i~a~~A~~-tG~----------------------A~~ 77 (187)
T PF11361_consen 28 TPALIAALAVAVVIVVWRLVRRESVQP-------ALSGLFGVAISAAIAWR-TGS----------------------AKD 77 (187)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccHH-------HHHHHHHHHHHHHHHHH-HCC----------------------hhh
Confidence 344455555555666677776776665 45555555555544432 221 233
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH
Q 018069 180 NWTLGCICLIGHCLFWSSWIVL 201 (361)
Q Consensus 180 ~~~~G~~~~l~a~~~~a~~~v~ 201 (361)
.+..|.+.-...+..+.+....
T Consensus 78 ~Fl~gi~~n~~~~~~~l~S~lv 99 (187)
T PF11361_consen 78 FFLPGIWTNAVYAVVFLVSVLV 99 (187)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH
Confidence 4556666665555555555554
No 173
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=20.42 E-value=3.5e+02 Score=19.70 Aligned_cols=31 Identities=29% Similarity=0.225 Sum_probs=15.9
Q ss_pred HhhhcccccccccccchhhHHHHHHHHHHHH
Q 018069 118 LLRIEQIHLTRKDGIAKVLGTLISVGGASVI 148 (361)
Q Consensus 118 ~~l~e~~~~~~~~~~~~~~g~~l~~~Gv~li 148 (361)
+.-+|++++|...+|..+-+..=..+|+.++
T Consensus 24 L~s~Epit~RL~iGR~ilGs~~S~~Aga~Li 54 (89)
T PF04550_consen 24 LASNEPITLRLFIGRVILGSAVSVVAGAALI 54 (89)
T ss_pred HccCCCCchhHHhHHHHHhhHHHHHHHHHHh
Confidence 3447899987444433333333334444444
No 174
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=20.26 E-value=86 Score=19.09 Aligned_cols=18 Identities=22% Similarity=0.540 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhhcccc
Q 018069 308 IGASLIIAGLYLVVLGKD 325 (361)
Q Consensus 308 iG~~lil~g~~l~~~~~~ 325 (361)
+|.++++++.+++.+.++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 345555566666654443
No 175
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=20.17 E-value=1.4e+02 Score=26.80 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=20.9
Q ss_pred HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHhhc
Q 018069 27 RTALNMGVSKLVFPLYRNIIAVIVLVPFAYFLEK 60 (361)
Q Consensus 27 k~~~~~~~~p~~~~~~r~~~~~l~l~~~~~~~~~ 60 (361)
..+... +.|.-++.+-.++-.+++..+..|..|
T Consensus 252 taA~aa-F~Pcgiaalvllil~vvliiLYiWlyr 284 (295)
T TIGR01478 252 SAATST-FLPYGIAALVLIILTVVLIILYIWLYR 284 (295)
T ss_pred HHHHHh-hcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334443 788888888777766665555555444
Done!