Query 018072
Match_columns 361
No_of_seqs 158 out of 1832
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 05:54:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018072.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018072hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 5E-63 1.1E-67 452.4 31.8 317 8-359 1-337 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 3.8E-60 8.3E-65 424.4 32.1 339 9-351 1-339 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 1.7E-59 3.6E-64 413.6 31.5 343 7-349 4-346 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.1E-55 2.4E-60 392.3 28.7 309 9-347 3-319 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.7E-54 3.7E-59 383.7 28.5 328 5-359 4-354 (360)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 8.5E-51 1.8E-55 389.0 35.7 332 11-347 1-341 (371)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.5E-50 3.3E-55 386.7 35.4 335 11-346 2-336 (368)
8 cd08301 alcohol_DH_plants Plan 100.0 1.9E-50 4E-55 386.4 35.6 337 10-347 2-339 (369)
9 PLN02740 Alcohol dehydrogenase 100.0 2E-50 4.3E-55 387.7 34.6 340 7-346 7-349 (381)
10 cd08300 alcohol_DH_class_III c 100.0 1.1E-49 2.4E-54 380.9 36.2 337 10-347 2-338 (368)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.2E-49 9.1E-54 375.6 34.4 325 10-347 1-327 (358)
12 PLN02827 Alcohol dehydrogenase 100.0 1.2E-48 2.6E-53 374.7 35.9 334 9-346 11-344 (378)
13 COG1063 Tdh Threonine dehydrog 100.0 2.3E-48 4.9E-53 367.8 31.6 313 11-348 1-318 (350)
14 cd08277 liver_alcohol_DH_like 100.0 9.1E-48 2E-52 367.3 35.1 333 9-346 1-334 (365)
15 cd08239 THR_DH_like L-threonin 100.0 2.4E-47 5.1E-52 360.8 32.9 305 11-346 1-307 (339)
16 PRK09880 L-idonate 5-dehydroge 100.0 9.1E-47 2E-51 357.5 32.6 304 9-346 3-310 (343)
17 COG0604 Qor NADPH:quinone redu 100.0 8.3E-47 1.8E-51 352.9 29.5 285 11-346 1-294 (326)
18 TIGR02819 fdhA_non_GSH formald 100.0 3.3E-46 7.3E-51 358.7 31.6 314 10-347 2-358 (393)
19 PLN02586 probable cinnamyl alc 100.0 5.5E-46 1.2E-50 354.1 30.5 313 6-346 8-323 (360)
20 cd08299 alcohol_DH_class_I_II_ 100.0 6.5E-44 1.4E-48 341.5 36.3 335 9-346 6-341 (373)
21 TIGR03201 dearomat_had 6-hydro 100.0 2E-44 4.4E-49 342.2 32.3 304 14-348 2-319 (349)
22 PLN02178 cinnamyl-alcohol dehy 100.0 2.2E-44 4.8E-49 344.4 31.5 306 13-346 9-318 (375)
23 cd08230 glucose_DH Glucose deh 100.0 2.8E-44 6.1E-49 342.0 31.4 300 11-343 1-317 (355)
24 PRK10309 galactitol-1-phosphat 100.0 9.6E-44 2.1E-48 337.3 33.5 307 11-347 1-314 (347)
25 TIGR02822 adh_fam_2 zinc-bindi 100.0 4.7E-44 1E-48 336.8 30.3 294 13-346 1-300 (329)
26 PLN02514 cinnamyl-alcohol dehy 100.0 1.3E-43 2.7E-48 337.7 32.1 309 9-345 8-319 (357)
27 cd05279 Zn_ADH1 Liver alcohol 100.0 5.6E-43 1.2E-47 334.3 35.7 332 12-346 2-334 (365)
28 cd08233 butanediol_DH_like (2R 100.0 9E-43 2E-47 331.1 33.7 304 11-346 1-317 (351)
29 cd08278 benzyl_alcohol_DH Benz 100.0 4.4E-42 9.6E-47 328.1 34.9 332 9-346 1-335 (365)
30 cd08231 MDR_TM0436_like Hypoth 100.0 3.4E-42 7.4E-47 328.4 33.8 312 12-342 2-323 (361)
31 cd08237 ribitol-5-phosphate_DH 100.0 2.5E-42 5.4E-47 326.8 27.1 284 10-342 2-297 (341)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 3.7E-41 8.1E-46 320.1 34.6 310 11-346 1-316 (351)
33 cd08279 Zn_ADH_class_III Class 100.0 2.4E-40 5.2E-45 315.9 35.3 330 11-346 1-332 (363)
34 cd08296 CAD_like Cinnamyl alco 100.0 1.1E-40 2.5E-45 314.5 32.2 301 11-345 1-303 (333)
35 PRK10083 putative oxidoreducta 100.0 3.5E-40 7.7E-45 311.7 33.0 300 11-346 1-303 (339)
36 cd08238 sorbose_phosphate_red 100.0 4.7E-40 1E-44 318.6 33.5 298 9-346 1-336 (410)
37 cd08256 Zn_ADH2 Alcohol dehydr 100.0 6.4E-40 1.4E-44 311.5 33.7 306 11-346 1-319 (350)
38 KOG1197 Predicted quinone oxid 100.0 4.1E-41 8.9E-46 288.7 22.2 285 6-345 4-298 (336)
39 cd05278 FDH_like Formaldehyde 100.0 2.5E-39 5.3E-44 306.8 32.9 309 11-346 1-313 (347)
40 cd05284 arabinose_DH_like D-ar 100.0 2.9E-39 6.3E-44 305.5 32.5 304 11-346 1-310 (340)
41 cd08240 6_hydroxyhexanoate_dh_ 100.0 3.5E-39 7.6E-44 306.4 32.1 307 11-346 1-319 (350)
42 cd08283 FDH_like_1 Glutathione 100.0 5.4E-39 1.2E-43 308.9 33.4 322 11-346 1-352 (386)
43 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.7E-39 3.7E-44 303.2 27.7 273 10-347 1-277 (308)
44 cd08246 crotonyl_coA_red croto 100.0 6.1E-39 1.3E-43 309.4 31.6 312 6-345 8-360 (393)
45 cd08286 FDH_like_ADH2 formalde 100.0 1.3E-38 2.7E-43 301.9 32.5 305 11-346 1-310 (345)
46 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.7E-38 3.8E-43 300.9 33.4 307 11-346 1-312 (345)
47 PLN02702 L-idonate 5-dehydroge 100.0 1.8E-38 3.8E-43 303.2 33.6 306 9-345 16-328 (364)
48 TIGR03366 HpnZ_proposed putati 100.0 2.4E-39 5.2E-44 298.2 26.2 256 67-346 1-267 (280)
49 cd08263 Zn_ADH10 Alcohol dehyd 100.0 3.8E-38 8.2E-43 301.2 33.0 328 11-346 1-335 (367)
50 cd08258 Zn_ADH4 Alcohol dehydr 100.0 7.6E-38 1.6E-42 291.9 32.6 300 11-342 1-306 (306)
51 cd08284 FDH_like_2 Glutathione 100.0 1.1E-37 2.5E-42 295.1 33.3 307 11-346 1-312 (344)
52 TIGR01751 crot-CoA-red crotony 100.0 8.3E-38 1.8E-42 302.0 32.6 311 7-345 4-355 (398)
53 cd08282 PFDH_like Pseudomonas 100.0 1.4E-37 3E-42 298.2 33.2 314 11-346 1-343 (375)
54 PRK09422 ethanol-active dehydr 100.0 1.1E-37 2.3E-42 294.6 31.8 303 11-345 1-305 (338)
55 PRK05396 tdh L-threonine 3-deh 100.0 1.7E-37 3.7E-42 293.7 33.0 301 11-342 1-305 (341)
56 cd08287 FDH_like_ADH3 formalde 100.0 1.9E-37 4.2E-42 293.7 32.8 303 11-346 1-313 (345)
57 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.8E-37 8.2E-42 290.8 33.5 301 11-346 1-303 (337)
58 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.2E-37 6.9E-42 296.5 33.4 307 10-346 28-353 (384)
59 PRK13771 putative alcohol dehy 100.0 1.6E-37 3.4E-42 293.0 29.3 299 11-345 1-301 (334)
60 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 5.8E-37 1.3E-41 289.1 32.7 304 11-346 1-308 (338)
61 cd08235 iditol_2_DH_like L-idi 100.0 9.1E-37 2E-41 288.8 33.7 304 11-345 1-311 (343)
62 cd05283 CAD1 Cinnamyl alcohol 100.0 3.3E-37 7.1E-42 291.4 30.2 305 12-345 1-307 (337)
63 cd08291 ETR_like_1 2-enoyl thi 100.0 4.1E-37 8.8E-42 289.2 29.3 279 11-345 1-293 (324)
64 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.4E-36 3E-41 287.4 32.1 294 11-346 1-309 (341)
65 cd05285 sorbitol_DH Sorbitol d 100.0 1.2E-36 2.5E-41 288.3 31.7 303 13-345 1-308 (343)
66 cd05281 TDH Threonine dehydrog 100.0 2.8E-36 6E-41 285.5 32.8 304 11-345 1-308 (341)
67 cd08297 CAD3 Cinnamyl alcohol 100.0 3.5E-36 7.7E-41 284.6 33.0 305 11-346 1-311 (341)
68 cd08264 Zn_ADH_like2 Alcohol d 100.0 2E-36 4.4E-41 284.3 30.3 293 11-343 1-296 (325)
69 cd08242 MDR_like Medium chain 100.0 2.6E-36 5.6E-41 283.0 30.7 285 11-345 1-286 (319)
70 KOG0025 Zn2+-binding dehydroge 100.0 9.1E-37 2E-41 266.5 25.3 285 7-345 16-319 (354)
71 cd08292 ETR_like_2 2-enoyl thi 100.0 4.5E-36 9.8E-41 281.5 30.6 280 11-346 1-294 (324)
72 cd08236 sugar_DH NAD(P)-depend 100.0 1.5E-35 3.2E-40 280.6 33.6 305 11-345 1-310 (343)
73 PLN03154 putative allyl alcoho 100.0 8.4E-36 1.8E-40 282.8 31.3 285 6-346 4-314 (348)
74 cd08234 threonine_DH_like L-th 100.0 1.8E-35 3.8E-40 278.9 32.6 302 11-346 1-303 (334)
75 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.3E-35 2.9E-40 279.0 31.6 299 11-345 1-301 (332)
76 cd08298 CAD2 Cinnamyl alcohol 100.0 1.3E-35 2.9E-40 279.2 31.0 296 11-346 1-301 (329)
77 TIGR00692 tdh L-threonine 3-de 100.0 3E-35 6.5E-40 278.3 32.0 299 17-345 5-307 (340)
78 cd08245 CAD Cinnamyl alcohol d 100.0 2.3E-35 5E-40 277.7 31.1 299 12-345 1-301 (330)
79 cd08295 double_bond_reductase_ 100.0 1.6E-35 3.4E-40 280.0 28.6 281 10-346 7-307 (338)
80 cd08266 Zn_ADH_like1 Alcohol d 100.0 4.2E-35 9E-40 276.1 31.3 304 11-345 1-310 (342)
81 cd08232 idonate-5-DH L-idonate 100.0 4.4E-35 9.5E-40 276.9 31.2 298 15-345 2-305 (339)
82 cd08294 leukotriene_B4_DH_like 100.0 6.5E-35 1.4E-39 274.4 29.3 274 10-346 2-298 (329)
83 cd08274 MDR9 Medium chain dehy 100.0 1.3E-34 2.8E-39 274.8 30.1 292 11-345 1-318 (350)
84 TIGR02825 B4_12hDH leukotriene 100.0 1.2E-34 2.6E-39 272.5 29.2 263 23-347 19-296 (325)
85 cd08293 PTGR2 Prostaglandin re 100.0 1.7E-34 3.7E-39 273.6 28.9 269 23-346 23-314 (345)
86 cd08290 ETR 2-enoyl thioester 100.0 2.8E-34 6.1E-39 271.5 28.7 284 11-346 1-307 (341)
87 TIGR02817 adh_fam_1 zinc-bindi 100.0 8.9E-34 1.9E-38 267.5 29.3 279 12-346 1-301 (336)
88 cd05188 MDR Medium chain reduc 100.0 8.5E-34 1.8E-38 258.6 27.4 269 37-339 1-271 (271)
89 cd08276 MDR7 Medium chain dehy 100.0 4.6E-33 1E-37 262.0 32.5 298 11-345 1-304 (336)
90 PRK10754 quinone oxidoreductas 100.0 5.1E-33 1.1E-37 261.5 28.1 238 10-300 1-242 (327)
91 cd08244 MDR_enoyl_red Possible 100.0 1.5E-32 3.2E-37 257.5 30.9 281 11-345 1-292 (324)
92 PTZ00354 alcohol dehydrogenase 100.0 2.1E-32 4.5E-37 257.5 30.3 283 10-345 1-296 (334)
93 cd08250 Mgc45594_like Mgc45594 100.0 2.2E-32 4.7E-37 257.3 29.0 280 10-346 1-297 (329)
94 COG2130 Putative NADP-dependen 100.0 1.7E-32 3.6E-37 242.1 24.0 268 23-348 27-309 (340)
95 cd08249 enoyl_reductase_like e 100.0 3.2E-32 6.9E-37 257.6 27.6 243 11-300 1-257 (339)
96 cd08252 AL_MDR Arginate lyase 100.0 1.1E-31 2.5E-36 253.0 30.8 281 11-346 1-303 (336)
97 cd05282 ETR_like 2-enoyl thioe 100.0 1.5E-31 3.2E-36 250.7 28.8 269 23-346 14-293 (323)
98 cd08270 MDR4 Medium chain dehy 100.0 1.3E-31 2.9E-36 249.1 28.2 267 11-346 1-274 (305)
99 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.1E-31 4.6E-36 249.8 29.6 263 11-325 1-271 (325)
100 cd08269 Zn_ADH9 Alcohol dehydr 100.0 3.6E-31 7.8E-36 246.9 29.9 272 17-346 2-279 (312)
101 cd08243 quinone_oxidoreductase 100.0 3.5E-31 7.5E-36 247.5 28.6 283 11-346 1-290 (320)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 6.5E-31 1.4E-35 246.8 27.8 261 11-323 1-269 (326)
103 KOG1198 Zinc-binding oxidoredu 100.0 2E-31 4.4E-36 249.6 23.6 267 23-345 20-313 (347)
104 TIGR02823 oxido_YhdH putative 100.0 1.9E-30 4.2E-35 243.4 30.2 279 12-344 1-291 (323)
105 cd08248 RTN4I1 Human Reticulon 100.0 4.4E-31 9.5E-36 250.5 24.5 236 11-300 1-260 (350)
106 cd05276 p53_inducible_oxidored 100.0 5.6E-30 1.2E-34 238.7 29.9 281 11-346 1-294 (323)
107 cd05288 PGDH Prostaglandin deh 100.0 4.9E-30 1.1E-34 241.2 28.4 278 11-347 2-301 (329)
108 cd08288 MDR_yhdh Yhdh putative 100.0 1.3E-29 2.8E-34 237.9 29.7 282 11-345 1-293 (324)
109 cd08253 zeta_crystallin Zeta-c 100.0 1.6E-29 3.4E-34 236.1 29.6 283 11-345 1-293 (325)
110 cd05286 QOR2 Quinone oxidoredu 100.0 2.4E-29 5.2E-34 234.2 30.5 279 12-346 1-289 (320)
111 cd08271 MDR5 Medium chain dehy 100.0 1.2E-29 2.7E-34 237.5 28.1 284 11-346 1-294 (325)
112 cd08273 MDR8 Medium chain dehy 100.0 1.4E-29 3.1E-34 238.1 27.4 276 12-345 2-300 (331)
113 cd08272 MDR6 Medium chain dehy 100.0 7.7E-29 1.7E-33 231.9 28.7 280 11-345 1-293 (326)
114 cd08247 AST1_like AST1 is a cy 100.0 1.1E-28 2.4E-33 234.5 30.1 240 12-297 2-259 (352)
115 TIGR02824 quinone_pig3 putativ 100.0 1.1E-28 2.3E-33 230.6 29.1 280 11-345 1-293 (325)
116 cd08268 MDR2 Medium chain dehy 100.0 2.1E-28 4.6E-33 228.9 30.1 285 11-345 1-296 (328)
117 cd08251 polyketide_synthase po 100.0 3.4E-28 7.4E-33 225.2 28.1 264 30-346 2-274 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 3.4E-28 7.5E-33 225.6 27.1 272 11-345 1-279 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 1.1E-27 2.3E-32 223.6 29.5 279 11-345 1-292 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 2.2E-27 4.8E-32 223.3 30.4 280 12-346 1-306 (337)
121 cd05195 enoyl_red enoyl reduct 100.0 2.7E-27 5.9E-32 217.2 25.0 253 36-345 1-263 (293)
122 cd08267 MDR1 Medium chain dehy 100.0 6.1E-27 1.3E-31 218.6 25.5 266 24-345 15-289 (319)
123 smart00829 PKS_ER Enoylreducta 100.0 1.2E-26 2.7E-31 212.6 24.0 249 40-346 2-259 (288)
124 KOG1196 Predicted NAD-dependen 99.9 5.8E-25 1.2E-29 193.8 25.9 264 25-346 26-309 (343)
125 cd08255 2-desacetyl-2-hydroxye 99.9 6.9E-24 1.5E-28 194.7 23.3 217 62-345 18-246 (277)
126 PF08240 ADH_N: Alcohol dehydr 99.9 1.1E-23 2.4E-28 166.1 8.9 108 35-164 1-109 (109)
127 KOG1202 Animal-type fatty acid 99.9 6.3E-23 1.4E-27 205.5 14.5 255 23-341 1429-1701(2376)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 6.3E-18 1.4E-22 137.3 14.1 128 206-341 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.4 5.4E-12 1.2E-16 123.5 15.1 148 192-345 161-333 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.2 2.2E-10 4.7E-15 109.7 15.7 143 184-347 189-337 (413)
131 TIGR00561 pntA NAD(P) transhyd 98.6 3.9E-07 8.5E-12 89.4 13.2 126 194-322 162-312 (511)
132 PRK05476 S-adenosyl-L-homocyst 98.4 2.6E-06 5.7E-11 82.0 12.7 104 182-300 197-302 (425)
133 TIGR01035 hemA glutamyl-tRNA r 98.3 3.9E-08 8.4E-13 95.4 -2.8 160 67-278 89-253 (417)
134 TIGR00936 ahcY adenosylhomocys 98.3 9.1E-06 2E-10 77.9 12.9 102 184-300 182-285 (406)
135 PRK08306 dipicolinate synthase 98.2 3.8E-05 8.3E-10 71.1 14.3 111 195-320 151-261 (296)
136 PRK11873 arsM arsenite S-adeno 98.2 2.7E-06 5.9E-11 77.9 6.5 104 190-300 72-186 (272)
137 PRK00517 prmA ribosomal protei 98.2 3.1E-05 6.7E-10 70.1 13.1 132 149-300 78-216 (250)
138 PLN02494 adenosylhomocysteinas 98.2 2.2E-05 4.8E-10 76.0 12.1 102 184-300 241-344 (477)
139 COG2518 Pcm Protein-L-isoaspar 98.1 1E-05 2.3E-10 69.8 7.9 118 166-296 45-168 (209)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1.5E-05 3.3E-10 74.4 9.3 108 159-278 139-251 (311)
141 TIGR00518 alaDH alanine dehydr 98.1 5.8E-05 1.3E-09 72.1 13.0 99 195-301 166-271 (370)
142 PRK12771 putative glutamate sy 98.0 4E-06 8.7E-11 84.9 4.3 81 192-278 133-235 (564)
143 PRK08324 short chain dehydroge 97.9 9.5E-05 2.1E-09 76.6 11.2 139 148-300 385-560 (681)
144 PTZ00075 Adenosylhomocysteinas 97.8 0.00018 4E-09 69.9 11.8 93 193-300 251-344 (476)
145 PF13602 ADH_zinc_N_2: Zinc-bi 97.8 3.9E-06 8.4E-11 67.4 -1.0 91 239-346 1-98 (127)
146 TIGR00406 prmA ribosomal prote 97.7 0.00011 2.3E-09 68.0 8.1 99 193-300 157-262 (288)
147 TIGR02853 spore_dpaA dipicolin 97.6 0.00068 1.5E-08 62.5 11.8 99 195-305 150-248 (287)
148 COG4221 Short-chain alcohol de 97.6 0.00039 8.4E-09 61.4 8.6 79 195-275 5-91 (246)
149 PRK00045 hemA glutamyl-tRNA re 97.5 0.00022 4.8E-09 69.6 7.5 161 67-278 91-255 (423)
150 PRK00377 cbiT cobalt-precorrin 97.5 0.0012 2.5E-08 57.6 10.9 102 189-296 34-144 (198)
151 PF01488 Shikimate_DH: Shikima 97.5 0.00043 9.3E-09 56.4 7.4 74 194-276 10-86 (135)
152 PRK11705 cyclopropane fatty ac 97.5 0.00079 1.7E-08 64.7 10.3 109 179-297 151-267 (383)
153 PRK13943 protein-L-isoaspartat 97.4 0.0013 2.8E-08 61.5 10.2 102 188-296 73-179 (322)
154 PF01135 PCMT: Protein-L-isoas 97.4 0.00024 5.1E-09 62.3 4.8 101 187-296 64-171 (209)
155 PRK06182 short chain dehydroge 97.3 0.0028 6E-08 57.9 11.8 79 195-275 2-84 (273)
156 PRK05786 fabG 3-ketoacyl-(acyl 97.3 0.0035 7.5E-08 55.7 11.9 104 195-300 4-138 (238)
157 COG2242 CobL Precorrin-6B meth 97.3 0.0036 7.8E-08 53.1 10.4 104 188-298 27-136 (187)
158 KOG1209 1-Acyl dihydroxyaceton 97.2 0.003 6.4E-08 54.5 9.5 111 195-307 6-148 (289)
159 PF00670 AdoHcyase_NAD: S-aden 97.2 0.0022 4.8E-08 53.4 8.5 94 192-300 19-113 (162)
160 PRK05993 short chain dehydroge 97.2 0.003 6.6E-08 57.8 10.0 78 195-274 3-85 (277)
161 PRK13942 protein-L-isoaspartat 97.1 0.0049 1.1E-07 54.3 10.4 101 188-296 69-175 (212)
162 COG3967 DltE Short-chain dehyd 97.1 0.003 6.4E-08 54.2 8.5 79 195-275 4-88 (245)
163 PF13460 NAD_binding_10: NADH( 97.1 0.0054 1.2E-07 52.2 10.5 94 199-300 1-100 (183)
164 PRK13944 protein-L-isoaspartat 97.1 0.0047 1E-07 54.0 10.1 103 188-296 65-172 (205)
165 TIGR00438 rrmJ cell division p 97.1 0.01 2.2E-07 51.1 11.9 102 190-297 27-146 (188)
166 PF12847 Methyltransf_18: Meth 97.0 0.0018 3.9E-08 50.4 6.3 95 195-296 1-110 (112)
167 PRK05693 short chain dehydroge 97.0 0.0038 8.2E-08 57.0 9.3 77 197-275 2-82 (274)
168 TIGR01470 cysG_Nterm siroheme 97.0 0.025 5.5E-07 49.4 14.0 120 195-325 8-128 (205)
169 PRK00107 gidB 16S rRNA methylt 97.0 0.0059 1.3E-07 52.6 9.8 98 192-297 42-145 (187)
170 PLN03209 translocon at the inn 97.0 0.0096 2.1E-07 59.6 12.2 48 188-236 72-120 (576)
171 TIGR02469 CbiT precorrin-6Y C5 97.0 0.01 2.2E-07 46.8 10.3 103 189-297 13-122 (124)
172 PRK08261 fabG 3-ketoacyl-(acyl 96.9 0.012 2.6E-07 57.9 12.4 79 194-274 208-293 (450)
173 COG1748 LYS9 Saccharopine dehy 96.9 0.01 2.3E-07 56.5 11.2 97 197-300 2-102 (389)
174 PRK07326 short chain dehydroge 96.9 0.015 3.2E-07 51.6 11.8 80 195-275 5-92 (237)
175 PRK12828 short chain dehydroge 96.9 0.016 3.5E-07 51.2 12.1 78 196-275 7-92 (239)
176 PRK04148 hypothetical protein; 96.9 0.0053 1.1E-07 49.5 7.9 95 192-296 13-108 (134)
177 PRK12742 oxidoreductase; Provi 96.9 0.026 5.7E-07 50.0 13.4 101 195-300 5-134 (237)
178 COG0300 DltE Short-chain dehyd 96.9 0.0066 1.4E-07 54.9 9.1 80 194-275 4-94 (265)
179 PRK06718 precorrin-2 dehydroge 96.9 0.043 9.4E-07 47.8 13.9 119 195-325 9-128 (202)
180 PRK08017 oxidoreductase; Provi 96.8 0.0087 1.9E-07 53.8 9.4 77 197-275 3-84 (256)
181 PRK08265 short chain dehydroge 96.8 0.02 4.4E-07 51.8 11.7 79 195-275 5-90 (261)
182 PRK14967 putative methyltransf 96.8 0.024 5.2E-07 50.2 11.9 99 189-297 30-159 (223)
183 TIGR00080 pimt protein-L-isoas 96.8 0.0091 2E-07 52.6 9.0 102 188-296 70-176 (215)
184 PF11017 DUF2855: Protein of u 96.8 0.08 1.7E-06 49.0 15.3 139 149-300 90-234 (314)
185 COG2230 Cfa Cyclopropane fatty 96.8 0.029 6.2E-07 51.2 12.3 109 184-302 61-181 (283)
186 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0043 9.3E-08 52.5 6.7 101 196-299 20-141 (168)
187 PRK08177 short chain dehydroge 96.7 0.011 2.4E-07 52.2 9.6 78 197-275 2-81 (225)
188 KOG1205 Predicted dehydrogenas 96.7 0.015 3.3E-07 53.0 10.5 113 194-307 10-159 (282)
189 COG2264 PrmA Ribosomal protein 96.7 0.024 5.2E-07 52.1 11.7 101 193-301 160-267 (300)
190 PRK06057 short chain dehydroge 96.7 0.01 2.2E-07 53.4 9.5 79 195-275 6-89 (255)
191 PRK06719 precorrin-2 dehydroge 96.7 0.04 8.6E-07 46.0 12.0 117 195-325 12-128 (157)
192 PRK06139 short chain dehydroge 96.7 0.0088 1.9E-07 56.4 9.0 79 195-275 6-94 (330)
193 PRK07806 short chain dehydroge 96.7 0.034 7.3E-07 49.7 12.5 101 195-298 5-135 (248)
194 PRK03369 murD UDP-N-acetylmura 96.6 0.013 2.9E-07 58.3 10.2 75 192-277 8-82 (488)
195 PRK07109 short chain dehydroge 96.6 0.023 5E-07 53.6 11.4 79 195-275 7-95 (334)
196 PRK07060 short chain dehydroge 96.6 0.017 3.8E-07 51.4 10.1 77 195-275 8-87 (245)
197 PF02353 CMAS: Mycolic acid cy 96.6 0.0055 1.2E-07 56.1 6.8 101 187-297 54-166 (273)
198 COG2226 UbiE Methylase involve 96.6 0.024 5.2E-07 50.5 10.5 107 187-300 43-159 (238)
199 TIGR02356 adenyl_thiF thiazole 96.6 0.02 4.4E-07 49.9 9.9 99 196-297 21-143 (202)
200 PRK12939 short chain dehydroge 96.6 0.029 6.2E-07 50.1 11.2 80 195-275 6-94 (250)
201 PF02826 2-Hacid_dh_C: D-isome 96.6 0.014 3E-07 49.9 8.6 90 194-298 34-128 (178)
202 PRK06953 short chain dehydroge 96.6 0.018 3.9E-07 50.7 9.6 77 197-275 2-80 (222)
203 COG4122 Predicted O-methyltran 96.6 0.036 7.8E-07 48.7 11.2 106 189-298 53-167 (219)
204 PRK07231 fabG 3-ketoacyl-(acyl 96.5 0.033 7.2E-07 49.7 11.4 80 195-275 4-91 (251)
205 COG0686 Ald Alanine dehydrogen 96.5 0.011 2.3E-07 54.0 7.9 98 196-300 168-271 (371)
206 TIGR01318 gltD_gamma_fam gluta 96.5 0.012 2.6E-07 58.3 9.1 79 194-277 139-238 (467)
207 PF13241 NAD_binding_7: Putati 96.5 0.022 4.7E-07 44.0 8.7 94 195-305 6-99 (103)
208 PRK07814 short chain dehydroge 96.5 0.014 3.1E-07 52.9 8.8 79 195-275 9-97 (263)
209 PRK05872 short chain dehydroge 96.5 0.017 3.6E-07 53.5 9.4 79 195-275 8-95 (296)
210 PRK00811 spermidine synthase; 96.5 0.019 4.2E-07 52.8 9.7 99 194-297 75-191 (283)
211 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.015 3.3E-07 52.6 8.9 78 195-274 4-88 (262)
212 PRK06949 short chain dehydroge 96.5 0.017 3.6E-07 52.0 9.0 81 194-275 7-96 (258)
213 PLN02366 spermidine synthase 96.5 0.022 4.8E-07 53.0 9.8 100 194-297 90-206 (308)
214 PF06325 PrmA: Ribosomal prote 96.4 0.0038 8.2E-08 57.6 4.6 96 193-300 159-262 (295)
215 PLN02780 ketoreductase/ oxidor 96.4 0.023 4.9E-07 53.4 10.0 81 194-275 51-142 (320)
216 PRK08267 short chain dehydroge 96.4 0.063 1.4E-06 48.4 12.5 77 197-275 2-87 (260)
217 CHL00194 ycf39 Ycf39; Provisio 96.4 0.049 1.1E-06 50.9 12.1 96 198-299 2-111 (317)
218 PRK07831 short chain dehydroge 96.4 0.019 4.1E-07 51.9 9.0 81 193-275 14-107 (262)
219 PRK12829 short chain dehydroge 96.4 0.016 3.5E-07 52.3 8.5 84 192-276 7-97 (264)
220 PRK12549 shikimate 5-dehydroge 96.4 0.038 8.1E-07 51.0 10.9 43 195-237 126-168 (284)
221 PRK12809 putative oxidoreducta 96.4 0.017 3.6E-07 59.6 9.4 76 195-276 309-406 (639)
222 PRK06200 2,3-dihydroxy-2,3-dih 96.4 0.021 4.5E-07 51.7 9.1 80 195-275 5-90 (263)
223 PRK07825 short chain dehydroge 96.4 0.023 4.9E-07 51.7 9.3 78 196-275 5-88 (273)
224 PRK08415 enoyl-(acyl carrier p 96.4 0.066 1.4E-06 49.0 12.4 103 195-300 4-146 (274)
225 PRK06841 short chain dehydroge 96.4 0.018 3.9E-07 51.7 8.5 80 195-275 14-99 (255)
226 COG2227 UbiG 2-polyprenyl-3-me 96.4 0.028 6E-07 49.7 9.2 95 194-296 58-160 (243)
227 cd01080 NAD_bind_m-THF_DH_Cycl 96.3 0.039 8.5E-07 46.6 9.8 79 192-300 40-119 (168)
228 COG2519 GCD14 tRNA(1-methylade 96.3 0.035 7.7E-07 49.4 9.8 104 188-298 87-196 (256)
229 PRK07832 short chain dehydroge 96.3 0.048 1E-06 49.6 11.2 76 198-275 2-88 (272)
230 PRK07402 precorrin-6B methylas 96.3 0.069 1.5E-06 46.2 11.6 105 188-298 33-143 (196)
231 PRK13940 glutamyl-tRNA reducta 96.3 0.018 3.9E-07 55.9 8.6 77 194-279 179-256 (414)
232 cd01065 NAD_bind_Shikimate_DH 96.3 0.029 6.2E-07 46.4 8.8 97 194-300 17-119 (155)
233 PRK08339 short chain dehydroge 96.3 0.029 6.2E-07 51.0 9.5 79 195-275 7-95 (263)
234 PRK09186 flagellin modificatio 96.3 0.066 1.4E-06 48.0 11.8 78 195-274 3-92 (256)
235 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.011 2.5E-07 58.1 7.3 95 188-300 26-126 (450)
236 PRK06180 short chain dehydroge 96.3 0.025 5.4E-07 51.7 9.0 79 195-275 3-88 (277)
237 PRK05867 short chain dehydroge 96.3 0.023 5E-07 51.1 8.6 79 195-275 8-96 (253)
238 PRK15116 sulfur acceptor prote 96.3 0.09 2E-06 47.8 12.3 103 195-299 29-155 (268)
239 PRK07502 cyclohexadienyl dehyd 96.2 0.041 8.9E-07 51.3 10.4 91 197-298 7-101 (307)
240 PRK13394 3-hydroxybutyrate deh 96.2 0.076 1.6E-06 47.8 11.9 80 195-275 6-94 (262)
241 PRK12550 shikimate 5-dehydroge 96.2 0.035 7.5E-07 50.8 9.5 69 192-274 118-187 (272)
242 PRK08217 fabG 3-ketoacyl-(acyl 96.2 0.029 6.2E-07 50.1 8.9 79 195-274 4-91 (253)
243 PRK12429 3-hydroxybutyrate deh 96.2 0.053 1.1E-06 48.6 10.7 80 195-275 3-91 (258)
244 PLN02781 Probable caffeoyl-CoA 96.2 0.046 9.9E-07 48.9 10.0 105 189-297 62-178 (234)
245 PRK05866 short chain dehydroge 96.2 0.036 7.9E-07 51.2 9.8 80 195-275 39-127 (293)
246 PRK06196 oxidoreductase; Provi 96.2 0.034 7.4E-07 51.9 9.7 80 195-275 25-109 (315)
247 PRK07774 short chain dehydroge 96.2 0.03 6.4E-07 50.1 8.9 80 195-275 5-93 (250)
248 PRK06484 short chain dehydroge 96.2 0.053 1.2E-06 54.3 11.7 104 194-300 267-403 (520)
249 PRK08263 short chain dehydroge 96.2 0.064 1.4E-06 48.9 11.3 79 196-275 3-87 (275)
250 TIGR01809 Shik-DH-AROM shikima 96.2 0.02 4.3E-07 52.8 7.8 75 195-275 124-200 (282)
251 cd01075 NAD_bind_Leu_Phe_Val_D 96.2 0.08 1.7E-06 46.1 11.2 82 194-288 26-108 (200)
252 COG0169 AroE Shikimate 5-dehyd 96.1 0.016 3.4E-07 53.2 6.8 45 194-238 124-168 (283)
253 PRK12769 putative oxidoreducta 96.1 0.023 5E-07 58.7 8.9 76 194-275 325-422 (654)
254 PRK06128 oxidoreductase; Provi 96.1 0.094 2E-06 48.5 12.2 103 195-300 54-194 (300)
255 PRK09291 short chain dehydroge 96.1 0.039 8.4E-07 49.6 9.4 75 196-274 2-82 (257)
256 PRK06505 enoyl-(acyl carrier p 96.1 0.041 8.9E-07 50.2 9.4 80 195-275 6-95 (271)
257 PRK06500 short chain dehydroge 96.1 0.037 8E-07 49.4 9.0 79 195-275 5-90 (249)
258 COG3288 PntA NAD/NADP transhyd 96.1 0.026 5.7E-07 51.4 7.7 130 191-322 159-308 (356)
259 PRK07024 short chain dehydroge 96.1 0.04 8.6E-07 49.7 9.2 79 196-275 2-88 (257)
260 PRK00312 pcm protein-L-isoaspa 96.1 0.064 1.4E-06 47.0 10.3 100 188-297 71-175 (212)
261 PRK09072 short chain dehydroge 96.1 0.044 9.6E-07 49.5 9.5 80 195-275 4-90 (263)
262 PRK00536 speE spermidine synth 96.1 0.028 6E-07 51.0 7.9 102 194-299 71-173 (262)
263 PF03446 NAD_binding_2: NAD bi 96.1 0.06 1.3E-06 45.2 9.6 89 198-300 3-97 (163)
264 PRK07062 short chain dehydroge 96.0 0.033 7.1E-07 50.4 8.6 79 195-275 7-97 (265)
265 PRK12475 thiamine/molybdopteri 96.0 0.048 1E-06 51.5 9.9 91 196-288 24-139 (338)
266 PRK06483 dihydromonapterin red 96.0 0.052 1.1E-06 48.1 9.7 78 196-275 2-84 (236)
267 PRK08317 hypothetical protein; 96.0 0.039 8.4E-07 48.9 8.8 104 188-297 12-124 (241)
268 PRK07478 short chain dehydroge 96.0 0.039 8.5E-07 49.5 8.9 80 195-275 5-93 (254)
269 PRK07677 short chain dehydroge 96.0 0.042 9.2E-07 49.3 9.1 79 196-275 1-88 (252)
270 PRK08628 short chain dehydroge 96.0 0.037 8.1E-07 49.8 8.7 80 195-275 6-93 (258)
271 PLN03075 nicotianamine synthas 96.0 0.047 1E-06 50.2 9.2 98 194-297 122-233 (296)
272 PLN02476 O-methyltransferase 96.0 0.075 1.6E-06 48.6 10.5 105 189-297 112-228 (278)
273 PRK11207 tellurite resistance 96.0 0.023 4.9E-07 49.4 6.9 98 189-296 24-133 (197)
274 PRK07890 short chain dehydroge 96.0 0.041 9E-07 49.4 8.9 79 195-275 4-92 (258)
275 PF02254 TrkA_N: TrkA-N domain 96.0 0.26 5.6E-06 38.5 12.4 92 199-296 1-95 (116)
276 KOG1201 Hydroxysteroid 17-beta 96.0 0.048 1E-06 49.7 9.0 79 194-274 36-123 (300)
277 PRK05854 short chain dehydroge 96.0 0.048 1E-06 50.9 9.5 79 195-275 13-103 (313)
278 PF03435 Saccharop_dh: Sacchar 96.0 0.054 1.2E-06 52.2 10.1 92 199-295 1-96 (386)
279 PRK06463 fabG 3-ketoacyl-(acyl 96.0 0.045 9.8E-07 49.2 9.1 79 195-275 6-89 (255)
280 PRK04457 spermidine synthase; 95.9 0.1 2.3E-06 47.4 11.3 98 194-296 65-176 (262)
281 PRK01581 speE spermidine synth 95.9 0.2 4.3E-06 47.5 13.3 100 194-298 149-269 (374)
282 cd01483 E1_enzyme_family Super 95.9 0.079 1.7E-06 43.3 9.7 97 198-298 1-122 (143)
283 TIGR01832 kduD 2-deoxy-D-gluco 95.9 0.06 1.3E-06 48.1 9.7 80 195-275 4-90 (248)
284 PRK07454 short chain dehydroge 95.9 0.056 1.2E-06 48.1 9.4 80 195-275 5-93 (241)
285 PRK07523 gluconate 5-dehydroge 95.9 0.047 1E-06 49.1 8.9 79 195-275 9-97 (255)
286 PRK08703 short chain dehydroge 95.9 0.068 1.5E-06 47.5 9.8 80 195-275 5-97 (239)
287 COG2910 Putative NADH-flavin r 95.9 0.054 1.2E-06 45.8 8.3 95 198-300 2-107 (211)
288 PRK14027 quinate/shikimate deh 95.9 0.075 1.6E-06 48.9 10.2 44 195-238 126-169 (283)
289 PRK14175 bifunctional 5,10-met 95.9 0.083 1.8E-06 48.4 10.2 95 175-300 137-233 (286)
290 PF08704 GCD14: tRNA methyltra 95.9 0.021 4.6E-07 51.2 6.3 108 187-298 32-147 (247)
291 PRK07688 thiamine/molybdopteri 95.8 0.059 1.3E-06 50.9 9.6 88 196-285 24-136 (339)
292 cd00757 ThiF_MoeB_HesA_family 95.8 0.1 2.2E-06 46.4 10.6 91 196-289 21-135 (228)
293 cd00755 YgdL_like Family of ac 95.8 0.073 1.6E-06 47.4 9.5 101 196-297 11-134 (231)
294 PRK05884 short chain dehydroge 95.8 0.072 1.6E-06 47.0 9.6 74 198-274 2-78 (223)
295 PRK06194 hypothetical protein; 95.8 0.058 1.3E-06 49.4 9.3 79 196-275 6-93 (287)
296 PLN02253 xanthoxin dehydrogena 95.8 0.048 1E-06 49.8 8.7 79 195-275 17-104 (280)
297 PRK06198 short chain dehydroge 95.8 0.046 1E-06 49.2 8.5 80 195-275 5-94 (260)
298 PRK07453 protochlorophyllide o 95.8 0.053 1.2E-06 50.7 9.2 78 195-274 5-92 (322)
299 PRK08589 short chain dehydroge 95.8 0.051 1.1E-06 49.5 8.8 79 195-275 5-92 (272)
300 KOG1014 17 beta-hydroxysteroid 95.8 0.074 1.6E-06 48.7 9.5 79 194-275 47-136 (312)
301 PRK08340 glucose-1-dehydrogena 95.8 0.073 1.6E-06 48.0 9.7 77 198-275 2-86 (259)
302 PF13659 Methyltransf_26: Meth 95.8 0.028 6.1E-07 43.9 6.1 96 196-296 1-114 (117)
303 PRK06482 short chain dehydroge 95.8 0.056 1.2E-06 49.2 9.0 78 197-275 3-86 (276)
304 PRK07063 short chain dehydroge 95.8 0.051 1.1E-06 49.0 8.7 79 195-275 6-96 (260)
305 PRK07985 oxidoreductase; Provi 95.8 0.13 2.8E-06 47.6 11.4 103 195-300 48-188 (294)
306 PRK07904 short chain dehydroge 95.8 0.091 2E-06 47.4 10.2 82 193-275 5-97 (253)
307 PRK05653 fabG 3-ketoacyl-(acyl 95.8 0.073 1.6E-06 47.2 9.5 79 195-275 4-92 (246)
308 PRK08213 gluconate 5-dehydroge 95.8 0.059 1.3E-06 48.5 9.0 79 195-275 11-99 (259)
309 PRK00258 aroE shikimate 5-dehy 95.8 0.04 8.7E-07 50.6 7.9 95 194-297 121-221 (278)
310 PRK06172 short chain dehydroge 95.8 0.056 1.2E-06 48.4 8.8 80 195-275 6-94 (253)
311 PRK05717 oxidoreductase; Valid 95.8 0.076 1.7E-06 47.7 9.6 80 195-275 9-94 (255)
312 PRK06179 short chain dehydroge 95.8 0.036 7.8E-07 50.3 7.6 76 196-275 4-83 (270)
313 PRK06138 short chain dehydroge 95.7 0.052 1.1E-06 48.5 8.5 80 195-275 4-91 (252)
314 cd01078 NAD_bind_H4MPT_DH NADP 95.7 0.11 2.4E-06 44.8 10.2 76 195-277 27-109 (194)
315 PRK06079 enoyl-(acyl carrier p 95.7 0.06 1.3E-06 48.5 8.9 79 195-275 6-93 (252)
316 PRK08594 enoyl-(acyl carrier p 95.7 0.17 3.7E-06 45.7 11.8 78 195-274 6-96 (257)
317 PRK08618 ornithine cyclodeamin 95.7 0.16 3.4E-06 47.8 11.9 94 194-300 125-224 (325)
318 PRK07856 short chain dehydroge 95.7 0.043 9.3E-07 49.3 7.9 75 195-275 5-85 (252)
319 PRK11036 putative S-adenosyl-L 95.7 0.16 3.4E-06 46.0 11.5 96 194-296 43-148 (255)
320 PRK07533 enoyl-(acyl carrier p 95.7 0.075 1.6E-06 48.0 9.4 104 195-300 9-151 (258)
321 PRK07576 short chain dehydroge 95.7 0.088 1.9E-06 47.7 9.8 79 195-274 8-95 (264)
322 TIGR02355 moeB molybdopterin s 95.7 0.075 1.6E-06 47.7 9.1 91 197-289 25-138 (240)
323 PRK05690 molybdopterin biosynt 95.7 0.11 2.3E-06 46.9 10.1 92 196-289 32-146 (245)
324 PRK12481 2-deoxy-D-gluconate 3 95.7 0.063 1.4E-06 48.3 8.7 79 195-275 7-93 (251)
325 PRK08226 short chain dehydroge 95.6 0.068 1.5E-06 48.2 8.9 80 195-275 5-92 (263)
326 cd05311 NAD_bind_2_malic_enz N 95.6 0.2 4.4E-06 44.4 11.7 91 194-297 23-128 (226)
327 PRK12823 benD 1,6-dihydroxycyc 95.6 0.057 1.2E-06 48.6 8.4 79 195-275 7-94 (260)
328 PRK07035 short chain dehydroge 95.6 0.067 1.5E-06 47.9 8.8 79 196-275 8-95 (252)
329 PRK07067 sorbitol dehydrogenas 95.6 0.071 1.5E-06 47.9 9.0 79 196-275 6-90 (257)
330 PRK10538 malonic semialdehyde 95.6 0.073 1.6E-06 47.7 9.0 76 198-275 2-84 (248)
331 PRK05562 precorrin-2 dehydroge 95.6 0.51 1.1E-05 41.7 13.9 119 195-325 24-144 (223)
332 PRK08643 acetoin reductase; Va 95.6 0.065 1.4E-06 48.1 8.7 78 196-275 2-89 (256)
333 PRK08644 thiamine biosynthesis 95.6 0.1 2.2E-06 45.9 9.5 34 196-229 28-61 (212)
334 PRK06197 short chain dehydroge 95.6 0.069 1.5E-06 49.6 9.0 79 195-274 15-104 (306)
335 PRK06181 short chain dehydroge 95.6 0.069 1.5E-06 48.2 8.8 78 197-275 2-88 (263)
336 PRK12367 short chain dehydroge 95.6 0.099 2.1E-06 47.0 9.7 75 195-275 13-89 (245)
337 TIGR00138 gidB 16S rRNA methyl 95.6 0.081 1.8E-06 45.3 8.7 94 195-296 42-141 (181)
338 PRK12937 short chain dehydroge 95.6 0.26 5.7E-06 43.7 12.4 103 195-299 4-141 (245)
339 TIGR00563 rsmB ribosomal RNA s 95.6 0.13 2.8E-06 50.4 11.1 105 189-298 232-369 (426)
340 cd01492 Aos1_SUMO Ubiquitin ac 95.6 0.11 2.4E-06 45.1 9.6 99 196-298 21-143 (197)
341 PRK07074 short chain dehydroge 95.6 0.084 1.8E-06 47.4 9.2 79 196-275 2-87 (257)
342 TIGR03840 TMPT_Se_Te thiopurin 95.6 0.22 4.7E-06 43.9 11.4 102 193-298 32-153 (213)
343 PRK08862 short chain dehydroge 95.6 0.15 3.3E-06 45.1 10.7 79 195-274 4-92 (227)
344 PRK08264 short chain dehydroge 95.5 0.066 1.4E-06 47.4 8.3 76 195-275 5-83 (238)
345 PRK05876 short chain dehydroge 95.5 0.071 1.5E-06 48.8 8.7 80 195-275 5-93 (275)
346 PF00899 ThiF: ThiF family; I 95.5 0.11 2.4E-06 42.0 8.9 98 196-297 2-124 (135)
347 PRK12548 shikimate 5-dehydroge 95.5 0.13 2.7E-06 47.6 10.3 36 195-230 125-160 (289)
348 PRK06603 enoyl-(acyl carrier p 95.5 0.094 2E-06 47.5 9.4 79 195-275 7-96 (260)
349 PRK06125 short chain dehydroge 95.5 0.082 1.8E-06 47.6 9.0 78 195-275 6-91 (259)
350 PRK08277 D-mannonate oxidoredu 95.5 0.076 1.7E-06 48.4 8.8 79 195-274 9-96 (278)
351 PRK08328 hypothetical protein; 95.5 0.073 1.6E-06 47.5 8.4 34 196-229 27-60 (231)
352 PRK05875 short chain dehydroge 95.5 0.082 1.8E-06 48.1 9.0 79 195-275 6-96 (276)
353 PRK12936 3-ketoacyl-(acyl-carr 95.5 0.088 1.9E-06 46.7 9.0 80 195-275 5-90 (245)
354 TIGR00417 speE spermidine synt 95.5 0.13 2.8E-06 47.0 10.2 99 194-297 71-186 (270)
355 PRK14103 trans-aconitate 2-met 95.5 0.097 2.1E-06 47.3 9.3 96 188-296 22-125 (255)
356 PRK08762 molybdopterin biosynt 95.5 0.081 1.8E-06 50.8 9.2 35 195-229 134-168 (376)
357 TIGR00507 aroE shikimate 5-deh 95.5 0.1 2.2E-06 47.7 9.4 94 193-299 114-216 (270)
358 COG0569 TrkA K+ transport syst 95.5 0.12 2.6E-06 45.9 9.5 74 198-276 2-77 (225)
359 PRK01683 trans-aconitate 2-met 95.4 0.1 2.2E-06 47.2 9.3 99 188-296 24-129 (258)
360 PRK08085 gluconate 5-dehydroge 95.4 0.098 2.1E-06 46.9 9.2 80 195-275 8-96 (254)
361 PRK08251 short chain dehydroge 95.4 0.09 1.9E-06 46.9 8.9 77 196-274 2-90 (248)
362 TIGR03206 benzo_BadH 2-hydroxy 95.4 0.09 1.9E-06 46.9 8.9 79 195-274 2-89 (250)
363 PLN02823 spermine synthase 95.4 0.15 3.3E-06 48.0 10.6 98 195-297 103-220 (336)
364 PRK08219 short chain dehydroge 95.4 0.16 3.5E-06 44.5 10.3 74 197-275 4-81 (227)
365 PRK06940 short chain dehydroge 95.4 0.2 4.2E-06 45.8 11.2 76 197-275 3-86 (275)
366 KOG1207 Diacetyl reductase/L-x 95.4 0.058 1.3E-06 45.2 6.7 47 195-242 6-53 (245)
367 PRK09242 tropinone reductase; 95.4 0.083 1.8E-06 47.5 8.6 79 195-275 8-98 (257)
368 PF00106 adh_short: short chai 95.4 0.065 1.4E-06 44.6 7.4 79 197-275 1-90 (167)
369 KOG0725 Reductases with broad 95.4 0.083 1.8E-06 48.3 8.6 80 194-275 6-99 (270)
370 PRK07066 3-hydroxybutyryl-CoA 95.4 0.28 6E-06 46.0 12.2 39 197-236 8-46 (321)
371 COG1179 Dinucleotide-utilizing 95.4 0.21 4.5E-06 44.2 10.5 103 196-300 30-156 (263)
372 PRK05597 molybdopterin biosynt 95.4 0.16 3.5E-06 48.4 10.8 35 196-230 28-62 (355)
373 PRK07577 short chain dehydroge 95.4 0.074 1.6E-06 47.0 8.1 73 196-275 3-78 (234)
374 PRK08690 enoyl-(acyl carrier p 95.4 0.11 2.4E-06 47.0 9.4 80 195-275 5-94 (261)
375 PRK06398 aldose dehydrogenase; 95.4 0.055 1.2E-06 48.9 7.3 74 195-275 5-82 (258)
376 PRK06914 short chain dehydroge 95.3 0.1 2.2E-06 47.6 9.1 77 196-275 3-91 (280)
377 PRK07340 ornithine cyclodeamin 95.3 0.11 2.3E-06 48.4 9.2 102 194-310 123-229 (304)
378 COG0373 HemA Glutamyl-tRNA red 95.3 0.096 2.1E-06 50.4 8.8 96 195-300 177-277 (414)
379 PRK08993 2-deoxy-D-gluconate 3 95.3 0.12 2.5E-06 46.5 9.2 80 195-275 9-95 (253)
380 PRK06114 short chain dehydroge 95.3 0.12 2.6E-06 46.4 9.1 80 195-275 7-96 (254)
381 PRK12384 sorbitol-6-phosphate 95.3 0.13 2.7E-06 46.3 9.3 79 196-275 2-91 (259)
382 PRK08287 cobalt-precorrin-6Y C 95.2 0.3 6.4E-06 41.8 11.1 101 188-297 24-131 (187)
383 cd01487 E1_ThiF_like E1_ThiF_l 95.2 0.14 3E-06 43.5 8.9 33 198-230 1-33 (174)
384 PF01210 NAD_Gly3P_dh_N: NAD-d 95.2 0.17 3.7E-06 42.2 9.3 84 198-288 1-91 (157)
385 PRK06720 hypothetical protein; 95.2 0.18 3.9E-06 42.6 9.5 80 195-275 15-103 (169)
386 PRK06124 gluconate 5-dehydroge 95.2 0.12 2.7E-06 46.3 9.1 79 195-275 10-98 (256)
387 PF02558 ApbA: Ketopantoate re 95.2 0.012 2.5E-07 48.6 2.2 93 199-297 1-101 (151)
388 PRK10669 putative cation:proto 95.2 0.21 4.5E-06 50.7 11.6 93 197-295 418-513 (558)
389 PRK04266 fibrillarin; Provisio 95.2 0.2 4.4E-06 44.5 10.1 102 189-296 66-175 (226)
390 PRK06484 short chain dehydroge 95.2 0.11 2.3E-06 52.2 9.3 79 195-275 4-89 (520)
391 TIGR00477 tehB tellurite resis 95.2 0.061 1.3E-06 46.6 6.6 99 188-297 23-133 (195)
392 TIGR02622 CDP_4_6_dhtase CDP-g 95.2 0.055 1.2E-06 51.3 6.9 77 195-275 3-85 (349)
393 PLN02244 tocopherol O-methyltr 95.2 0.12 2.5E-06 49.0 9.0 98 194-298 117-224 (340)
394 PRK08220 2,3-dihydroxybenzoate 95.2 0.22 4.8E-06 44.4 10.5 75 195-275 7-86 (252)
395 PRK06101 short chain dehydroge 95.1 0.19 4.2E-06 44.7 10.1 75 197-274 2-80 (240)
396 PRK07666 fabG 3-ketoacyl-(acyl 95.1 0.12 2.6E-06 45.8 8.7 79 196-275 7-94 (239)
397 KOG1610 Corticosteroid 11-beta 95.1 0.38 8.2E-06 44.3 11.7 109 193-302 26-169 (322)
398 TIGR02354 thiF_fam2 thiamine b 95.1 0.21 4.6E-06 43.4 9.9 34 196-229 21-54 (200)
399 TIGR01963 PHB_DH 3-hydroxybuty 95.1 0.12 2.5E-06 46.2 8.6 77 197-275 2-88 (255)
400 PRK06935 2-deoxy-D-gluconate 3 95.1 0.13 2.7E-06 46.4 8.8 79 195-275 14-101 (258)
401 PRK07102 short chain dehydroge 95.1 0.19 4.2E-06 44.7 9.9 77 197-275 2-86 (243)
402 PF10727 Rossmann-like: Rossma 95.1 0.081 1.8E-06 42.4 6.6 79 196-288 10-90 (127)
403 PRK08159 enoyl-(acyl carrier p 95.1 0.18 3.9E-06 46.0 9.9 82 193-275 7-98 (272)
404 TIGR00446 nop2p NOL1/NOP2/sun 95.1 0.64 1.4E-05 42.3 13.4 102 190-298 66-200 (264)
405 PRK00121 trmB tRNA (guanine-N( 95.1 0.35 7.6E-06 42.1 11.2 98 195-297 40-156 (202)
406 PRK07574 formate dehydrogenase 95.1 0.13 2.7E-06 49.5 9.0 45 195-240 191-235 (385)
407 PF02737 3HCDH_N: 3-hydroxyacy 95.1 0.13 2.7E-06 44.0 8.2 39 198-237 1-39 (180)
408 PRK06077 fabG 3-ketoacyl-(acyl 95.0 0.5 1.1E-05 42.1 12.5 102 196-300 6-143 (252)
409 PRK03562 glutathione-regulated 95.0 0.17 3.6E-06 52.0 10.3 81 196-281 400-480 (621)
410 PRK12826 3-ketoacyl-(acyl-carr 95.0 0.16 3.5E-06 45.2 9.2 80 195-275 5-93 (251)
411 PRK07984 enoyl-(acyl carrier p 95.0 0.19 4.1E-06 45.6 9.7 78 195-274 5-93 (262)
412 PRK06113 7-alpha-hydroxysteroi 95.0 0.14 3.1E-06 45.9 8.8 80 195-275 10-98 (255)
413 PTZ00098 phosphoethanolamine N 95.0 0.15 3.2E-06 46.4 8.9 106 187-299 44-158 (263)
414 PRK07791 short chain dehydroge 94.9 0.18 3.9E-06 46.4 9.4 80 194-275 4-102 (286)
415 PRK14192 bifunctional 5,10-met 94.9 0.23 4.9E-06 45.7 9.9 78 193-300 156-234 (283)
416 PRK14903 16S rRNA methyltransf 94.9 0.43 9.2E-06 46.8 12.3 105 189-299 231-368 (431)
417 PF01113 DapB_N: Dihydrodipico 94.9 0.23 4.9E-06 39.6 8.7 94 198-300 2-100 (124)
418 TIGR02632 RhaD_aldol-ADH rhamn 94.9 0.14 3.1E-06 53.1 9.4 79 195-275 413-503 (676)
419 PRK08945 putative oxoacyl-(acy 94.9 0.2 4.4E-06 44.6 9.4 83 192-275 8-102 (247)
420 PRK08303 short chain dehydroge 94.8 0.18 3.8E-06 47.0 9.2 78 195-274 7-105 (305)
421 PRK01438 murD UDP-N-acetylmura 94.8 0.25 5.3E-06 49.1 10.7 70 194-275 14-88 (480)
422 PRK03612 spermidine synthase; 94.8 0.2 4.3E-06 50.4 10.0 99 194-297 296-415 (521)
423 PRK06523 short chain dehydroge 94.8 0.11 2.4E-06 46.7 7.6 73 195-274 8-86 (260)
424 PLN02589 caffeoyl-CoA O-methyl 94.8 0.31 6.8E-06 43.8 10.3 101 191-295 75-188 (247)
425 PLN00203 glutamyl-tRNA reducta 94.8 0.1 2.3E-06 52.1 7.9 98 196-300 266-372 (519)
426 COG1648 CysG Siroheme synthase 94.8 0.73 1.6E-05 40.4 12.2 119 195-324 11-130 (210)
427 TIGR02752 MenG_heptapren 2-hep 94.7 0.28 6.1E-06 43.5 9.9 104 188-298 38-152 (231)
428 PLN00141 Tic62-NAD(P)-related 94.7 0.21 4.4E-06 44.9 9.1 101 194-299 15-133 (251)
429 PRK07097 gluconate 5-dehydroge 94.7 0.2 4.4E-06 45.3 9.1 80 195-275 9-97 (265)
430 PRK05600 thiamine biosynthesis 94.7 0.22 4.7E-06 47.7 9.6 34 196-229 41-74 (370)
431 PRK03659 glutathione-regulated 94.7 0.24 5.2E-06 50.7 10.4 93 197-295 401-496 (601)
432 PF02719 Polysacc_synt_2: Poly 94.7 0.22 4.9E-06 45.7 9.1 76 199-274 1-86 (293)
433 PF01596 Methyltransf_3: O-met 94.7 0.055 1.2E-06 47.3 5.0 103 192-298 42-156 (205)
434 PLN02657 3,8-divinyl protochlo 94.7 0.25 5.4E-06 47.7 10.0 81 192-275 56-146 (390)
435 PLN03139 formate dehydrogenase 94.7 0.16 3.5E-06 48.7 8.6 46 195-241 198-243 (386)
436 COG0421 SpeE Spermidine syntha 94.7 0.28 6E-06 45.0 9.7 97 197-296 78-189 (282)
437 PRK08063 enoyl-(acyl carrier p 94.7 0.17 3.7E-06 45.1 8.4 80 195-275 3-92 (250)
438 TIGR00872 gnd_rel 6-phosphoglu 94.7 0.28 6E-06 45.5 10.0 89 198-298 2-94 (298)
439 COG2084 MmsB 3-hydroxyisobutyr 94.6 0.24 5.3E-06 45.4 9.2 89 198-300 2-98 (286)
440 PRK14618 NAD(P)H-dependent gly 94.6 0.38 8.3E-06 45.2 11.0 93 197-298 5-105 (328)
441 PRK08278 short chain dehydroge 94.6 0.21 4.5E-06 45.5 8.9 79 195-275 5-100 (273)
442 PLN02256 arogenate dehydrogena 94.6 0.31 6.7E-06 45.4 10.1 90 194-298 34-128 (304)
443 PRK05565 fabG 3-ketoacyl-(acyl 94.6 0.2 4.4E-06 44.4 8.6 79 196-275 5-93 (247)
444 PRK07411 hypothetical protein; 94.5 0.37 8E-06 46.6 10.8 34 196-229 38-71 (390)
445 PF01408 GFO_IDH_MocA: Oxidore 94.5 0.61 1.3E-05 36.5 10.4 89 198-298 2-93 (120)
446 PRK07417 arogenate dehydrogena 94.5 0.26 5.6E-06 45.2 9.4 68 198-277 2-69 (279)
447 PF03807 F420_oxidored: NADP o 94.5 1.3 2.8E-05 33.2 11.8 76 198-286 1-81 (96)
448 COG0673 MviM Predicted dehydro 94.5 0.44 9.5E-06 44.8 11.2 134 198-344 5-145 (342)
449 PRK06035 3-hydroxyacyl-CoA deh 94.5 0.88 1.9E-05 42.0 12.9 39 197-236 4-42 (291)
450 cd01485 E1-1_like Ubiquitin ac 94.5 0.4 8.6E-06 41.7 10.0 34 196-229 19-52 (198)
451 PRK14902 16S rRNA methyltransf 94.5 0.35 7.7E-06 47.5 10.8 103 189-297 244-379 (444)
452 PRK00216 ubiE ubiquinone/menaq 94.5 0.18 3.9E-06 44.6 8.1 105 189-299 45-160 (239)
453 PRK06171 sorbitol-6-phosphate 94.5 0.11 2.3E-06 47.1 6.7 76 195-275 8-87 (266)
454 PRK09135 pteridine reductase; 94.5 0.24 5.1E-06 44.0 8.9 79 195-274 5-94 (249)
455 PRK05650 short chain dehydroge 94.5 0.2 4.4E-06 45.4 8.5 77 198-275 2-87 (270)
456 PLN02490 MPBQ/MSBQ methyltrans 94.5 0.23 4.9E-06 46.9 8.9 97 194-298 112-216 (340)
457 PLN02233 ubiquinone biosynthes 94.5 0.5 1.1E-05 42.9 11.0 103 189-300 67-185 (261)
458 PRK11579 putative oxidoreducta 94.4 0.93 2E-05 42.9 13.2 132 197-344 5-142 (346)
459 PRK07424 bifunctional sterol d 94.4 0.26 5.7E-06 47.7 9.5 76 195-275 177-255 (406)
460 PRK09599 6-phosphogluconate de 94.4 0.26 5.5E-06 45.8 9.2 44 198-242 2-45 (301)
461 PF02670 DXP_reductoisom: 1-de 94.4 0.43 9.3E-06 38.3 9.1 94 199-294 1-118 (129)
462 PRK12814 putative NADPH-depend 94.4 0.21 4.6E-06 51.6 9.3 77 194-276 191-289 (652)
463 PRK11064 wecC UDP-N-acetyl-D-m 94.4 0.63 1.4E-05 45.4 12.1 73 197-276 4-86 (415)
464 PRK12747 short chain dehydroge 94.4 0.8 1.7E-05 40.9 12.1 104 195-300 3-147 (252)
465 PRK11559 garR tartronate semia 94.4 0.19 4.2E-06 46.4 8.2 71 198-281 4-74 (296)
466 PRK08223 hypothetical protein; 94.4 0.24 5.3E-06 45.4 8.6 34 196-229 27-60 (287)
467 TIGR01505 tartro_sem_red 2-hyd 94.3 0.39 8.4E-06 44.3 10.2 70 198-280 1-70 (291)
468 cd05211 NAD_bind_Glu_Leu_Phe_V 94.3 0.36 7.8E-06 42.6 9.4 47 194-240 21-77 (217)
469 PRK14968 putative methyltransf 94.3 0.28 6E-06 41.7 8.6 43 193-238 21-63 (188)
470 PRK12490 6-phosphogluconate de 94.3 0.23 5E-06 46.1 8.6 91 198-299 2-96 (299)
471 PRK05855 short chain dehydroge 94.3 0.2 4.2E-06 50.7 8.8 79 195-275 314-402 (582)
472 PRK10901 16S rRNA methyltransf 94.3 0.52 1.1E-05 46.1 11.4 103 189-297 238-372 (427)
473 PRK12938 acetyacetyl-CoA reduc 94.3 0.22 4.8E-06 44.3 8.2 78 196-275 3-91 (246)
474 PRK12743 oxidoreductase; Provi 94.3 0.26 5.6E-06 44.3 8.7 79 196-275 2-90 (256)
475 PRK12779 putative bifunctional 94.3 0.16 3.4E-06 54.6 8.3 78 194-275 304-402 (944)
476 PRK13984 putative oxidoreducta 94.3 0.22 4.9E-06 51.0 9.2 77 193-275 280-378 (604)
477 PRK06701 short chain dehydroge 94.3 0.27 5.9E-06 45.3 8.9 81 194-275 44-134 (290)
478 PRK06997 enoyl-(acyl carrier p 94.3 0.3 6.6E-06 44.1 9.1 79 195-275 5-94 (260)
479 PRK07878 molybdopterin biosynt 94.2 0.49 1.1E-05 45.7 10.9 34 196-229 42-75 (392)
480 PRK06141 ornithine cyclodeamin 94.2 0.83 1.8E-05 42.7 12.2 104 194-310 123-231 (314)
481 TIGR03215 ac_ald_DH_ac acetald 94.2 0.3 6.4E-06 44.9 8.9 89 198-297 3-94 (285)
482 PRK07775 short chain dehydroge 94.2 0.36 7.8E-06 43.9 9.6 80 195-275 9-97 (274)
483 PRK11188 rrmJ 23S rRNA methylt 94.2 0.7 1.5E-05 40.5 11.0 97 193-296 49-164 (209)
484 TIGR02415 23BDH acetoin reduct 94.2 0.26 5.6E-06 44.1 8.5 76 198-275 2-87 (254)
485 PRK15469 ghrA bifunctional gly 94.2 0.34 7.4E-06 45.3 9.4 36 195-231 135-170 (312)
486 PRK05708 2-dehydropantoate 2-r 94.2 0.22 4.9E-06 46.3 8.3 96 197-296 3-103 (305)
487 PRK13656 trans-2-enoyl-CoA red 94.2 0.66 1.4E-05 44.4 11.3 81 194-276 39-142 (398)
488 COG0031 CysK Cysteine synthase 94.2 1.7 3.8E-05 40.0 13.7 61 188-248 54-116 (300)
489 PRK08300 acetaldehyde dehydrog 94.2 0.53 1.1E-05 43.6 10.4 94 197-298 5-101 (302)
490 PRK07370 enoyl-(acyl carrier p 94.1 0.25 5.3E-06 44.7 8.1 103 195-300 5-150 (258)
491 cd01484 E1-2_like Ubiquitin ac 94.1 0.47 1E-05 42.3 9.7 32 198-229 1-32 (234)
492 PRK14194 bifunctional 5,10-met 94.1 0.46 9.9E-06 43.9 9.7 95 175-300 138-234 (301)
493 PRK06522 2-dehydropantoate 2-r 94.0 0.38 8.3E-06 44.4 9.5 82 198-287 2-87 (304)
494 PRK05557 fabG 3-ketoacyl-(acyl 94.0 0.42 9.2E-06 42.2 9.5 79 195-275 4-93 (248)
495 PRK13243 glyoxylate reductase; 94.0 0.43 9.3E-06 45.0 9.9 37 195-232 149-185 (333)
496 PLN02928 oxidoreductase family 94.0 0.47 1E-05 45.0 10.1 35 195-230 158-192 (347)
497 PRK07792 fabG 3-ketoacyl-(acyl 94.0 0.41 8.9E-06 44.5 9.6 80 195-275 11-99 (306)
498 PF13823 ADH_N_assoc: Alcohol 94.0 0.066 1.4E-06 29.0 2.5 22 11-33 1-22 (23)
499 PRK13255 thiopurine S-methyltr 94.0 0.81 1.8E-05 40.4 11.0 102 191-296 33-154 (218)
500 PF05368 NmrA: NmrA-like famil 94.0 0.3 6.4E-06 43.3 8.3 71 199-275 1-74 (233)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=5e-63 Score=452.36 Aligned_cols=317 Identities=33% Similarity=0.525 Sum_probs=285.6
Q ss_pred ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|.+|||+++.++++++++++++.|+|+++||+|||+++|||++|++.+.|.++...+|++||||++|+|+++|++|+.|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred CCCEEee-cCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072 88 VGDHVLP-VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (361)
Q Consensus 88 ~Gd~V~~-~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~ 166 (361)
+||||.+ ....+|++|++|++|++++|++.... |.+ .+ |+||||+++|+.++++||+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~---gy~---------~~----------GGyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT---GYT---------TD----------GGYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc---cee---------ec----------CcceeEEEEchHHeEECCC
Confidence 9999998 99999999999999999999997766 433 22 3899999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
++++++||.+.|+..|.|+++ +..+++||++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999996 55999999999999999999999999999997 9999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN 325 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~ 325 (361)
..+.+ ..+.++.. +|+++|+++ +.+++.+++.|+++ |+++++|.........++...++ ++++|.|+..++
T Consensus 217 ~~~~~--~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 217 SSDSD--ALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred cCCch--hhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 77433 55566553 999999999 79999999999998 99999998852222334445444 999999999888
Q ss_pred CCcCCcHHHHHHHHHcCCc------------------ccCCCCcceeEEEEe
Q 018072 326 YKPRTDLPSVVDMYMNKVI------------------RFSSSRPSFRCVIII 359 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l------------------~~~~~~~~~~~vl~~ 359 (361)
+.|+++++++..++++ ++++.+.+||.||++
T Consensus 289 ---~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 289 ---RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred ---HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence 4899999999999988 456678889988875
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.8e-60 Score=424.36 Aligned_cols=339 Identities=48% Similarity=0.852 Sum_probs=320.5
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
+++||++.+++++||+++|+++++|+++|||||+.++|+||+|...++|..+.. +|.++|||++|+|+++|++|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 468999999999999999999999999999999999999999999999988866 9999999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|+..+.-+|++|..|.+|..|+|...+-..-.|.. .+|...++.+|.+.+++.+.++|+||.+++...++|++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99999999999999999999999999987777666744 89988999999999999999999999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
+++.++++.|...|.+.+..+.+++++|++|.|+|.|++|++++|-|+..|+.+||++|.+++|++++++||+++++|..
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 328 (361)
+.. ++.+.+.+++++|+|.+||++|+.+.++++++++.+. |+.+++|.......+++++..+..+.+++|+++|+...
T Consensus 239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 763 4899999999999999999999999999999999995 99999999988888989988888779999999999888
Q ss_pred CCcHHHHHHHHHcCCcccCCCCc
Q 018072 329 RTDLPSVVDMYMNKVIRFSSSRP 351 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~~~~~~ 351 (361)
+.+++++++++++|+|++++...
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt 339 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVT 339 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhh
Confidence 99999999999999998776544
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-59 Score=413.55 Aligned_cols=343 Identities=56% Similarity=0.991 Sum_probs=327.4
Q ss_pred cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072 7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (361)
Q Consensus 7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 86 (361)
-+.++||++.+++++||.++|+..++|+.+||+||++++++|++|...|.|..+...+|.++|||++|+|+.+|++|+++
T Consensus 4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~v 83 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTV 83 (375)
T ss_pred CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcccc
Confidence 36889999999999999999999999999999999999999999999999987778899999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (361)
Q Consensus 87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~ 166 (361)
++||+|+..+...|+.|.+|+++..|.|...+.....+...+||.+.+.-+|++++||.+..+|+||.+++...+++|++
T Consensus 84 k~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~ 163 (375)
T KOG0022|consen 84 KPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDP 163 (375)
T ss_pred CCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCC
Confidence 99999999999999999999999999999998887667777899999999999999999999999999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
..+++.++++.|.+.|+|.|.++.+.++||+++.|+|.|.+|++++|-|++.|+.+||++|.+++|.+.++++|+++.+|
T Consensus 164 ~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN 243 (375)
T KOG0022|consen 164 SAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN 243 (375)
T ss_pred CCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 326 (361)
..+-...+.+.+++.+++|+|.-|||+|+.+++.+++.+...+||.-+.+|.......+.+.++.++.+.++.|+.+|.+
T Consensus 244 p~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~ 323 (375)
T KOG0022|consen 244 PKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGF 323 (375)
T ss_pred hhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccc
Confidence 88655569999999999999999999999999999999999988999999999988999999999999999999999999
Q ss_pred CcCCcHHHHHHHHHcCCcccCCC
Q 018072 327 KPRTDLPSVVDMYMNKVIRFSSS 349 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~~~~~ 349 (361)
+++.+++.+++.+.++++.+++.
T Consensus 324 K~~~~iP~lV~~y~~~~l~ld~~ 346 (375)
T KOG0022|consen 324 KSKSDIPKLVKDYMKKKLNLDEF 346 (375)
T ss_pred cchhhhhHHHHHHHhCccchhhh
Confidence 99999999999999999866543
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-55 Score=392.30 Aligned_cols=309 Identities=28% Similarity=0.436 Sum_probs=274.1
Q ss_pred cceeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVS 84 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~ 84 (361)
.+|+|+++.++++ +++++.|.|++ .|+||+|++.++|||++|++.|...... .+.|+++|||.+|+|.++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 5799999999998 99999999987 9999999999999999999999765433 35799999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072 85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (361)
Q Consensus 85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i 164 (361)
++++||||++.|..+|..|++|++|++|+|++..+. +..+.+| ++++|++.++++++||
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KL 140 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKL 140 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeC
Confidence 999999999999999999999999999999999988 4333444 9999999999999999
Q ss_pred CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (361)
Q Consensus 165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v 244 (361)
||++|++++|++. ++.++|||. +++++++|++|||+|+|++|+++...|+++|+.+|+.++..++|++.++++|++.+
T Consensus 141 Pd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 141 PDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred CCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 9999999999998 899999995 78999999999999999999999999999999999999999999999999999988
Q ss_pred EcCCCCC--ccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEE
Q 018072 245 VNTSEHD--RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKG 320 (361)
Q Consensus 245 v~~~~~~--~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g 320 (361)
.+....+ +++.+.++...++ .+|+.|||+|....++.++..++.+ |+++++|+-....+++ +.... |++++.|
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fp--i~~v~~kE~~~~g 295 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFP--IIDVALKEVDLRG 295 (354)
T ss_pred eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccC--hhhhhhheeeeee
Confidence 8766544 3355555555554 6999999999989999999999998 9999999866444444 44444 9999999
Q ss_pred eeecCCCcCCcHHHHHHHHHcCCcccC
Q 018072 321 TFFGNYKPRTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ 347 (361)
++.+. ..+++.+++++++|+++++
T Consensus 296 ~fry~---~~~y~~ai~li~sGki~~k 319 (354)
T KOG0024|consen 296 SFRYC---NGDYPTAIELVSSGKIDVK 319 (354)
T ss_pred eeeec---cccHHHHHHHHHcCCcCch
Confidence 98655 3699999999999999765
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-54 Score=383.70 Aligned_cols=328 Identities=27% Similarity=0.443 Sum_probs=284.2
Q ss_pred cccccceeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072 5 AGLILTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (361)
Q Consensus 5 ~~~~~~m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~ 82 (361)
...|.++++|.+..++. ++++.+++.|+|+++||+||++++|||++|++.|.|.+...++|+++|||.+|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 35799999999999988 4777999999999999999999999999999999999988999999999999999999999
Q ss_pred CCCCCCCCEEe-ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072 83 VSDLEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV 161 (361)
Q Consensus 83 v~~~~~Gd~V~-~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~ 161 (361)
|+.|++||||- -....+|.+|++|++++.++|++..+..+ |+. .|| ....|+|++|+++++.++
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~-g~~-~DG-------------t~~~ggf~~~~~v~~~~a 148 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYN-GVY-HDG-------------TITQGGFQEYAVVDEVFA 148 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeEecc-ccc-cCC-------------CCccCccceeEEEeeeeE
Confidence 99999999994 55667999999999999999995333200 333 333 334578999999999999
Q ss_pred EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcC
Q 018072 162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFG 240 (361)
Q Consensus 162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G 240 (361)
++||++++.++||.+.|+..|.|.++ ...++.||+++.|.|+|++|++++|+|+++|. +|+++++++ .|.+.++.||
T Consensus 149 ~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LG 226 (360)
T KOG0023|consen 149 IKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLG 226 (360)
T ss_pred EECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcC
Confidence 99999999999999999999999985 77888999999999998899999999999999 999999988 5555567799
Q ss_pred CCEEEcCC-CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEE
Q 018072 241 VTDFVNTS-EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL 318 (361)
Q Consensus 241 ~~~vv~~~-~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l 318 (361)
++..++.. +.+ +.+.+...+++++|-+.+. ....++.++++|+.+ |++|++|.+.. .+.++...++ +.+.|
T Consensus 227 Ad~fv~~~~d~d--~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 227 ADVFVDSTEDPD--IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSI 299 (360)
T ss_pred cceeEEecCCHH--HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEE
Confidence 99988876 444 8888888888778887776 446889999999998 99999999885 4445455444 99999
Q ss_pred EEeeecCCCcCCcHHHHHHHHHcCCc-----------------ccCCCCcceeEEEEe
Q 018072 319 KGTFFGNYKPRTDLPSVVDMYMNKVI-----------------RFSSSRPSFRCVIII 359 (361)
Q Consensus 319 ~g~~~~~~~~~~~~~~~~~~~~~~~l-----------------~~~~~~~~~~~vl~~ 359 (361)
.||..|+. .+.++++++..++.+ ++++...+||+|++.
T Consensus 300 ~GS~vG~~---ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 300 KGSIVGSR---KETQEALDFVARGLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred EeeccccH---HHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence 99999984 789999999999887 688899999999875
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=8.5e-51 Score=389.03 Aligned_cols=332 Identities=39% Similarity=0.694 Sum_probs=277.8
Q ss_pred eeEEEeecCCC--------CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072 11 CKAAVAWEAGK--------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (361)
Q Consensus 11 m~a~~~~~~~~--------~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~ 82 (361)
|||+++.++|. .++++++|.|+|+++||+|||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 89999998763 389999999999999999999999999999999988653 356899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA 162 (361)
Q Consensus 83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~ 162 (361)
++++++||+|++.+..+|+.|+.|++|+++.|.+.......|.. .+|...+..++..+.+..+.|+|+||+++|++.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999876443222221 11211121222111112234689999999999999
Q ss_pred ECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072 163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (361)
Q Consensus 163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~ 242 (361)
++|+++++++|+.+++++.|||+++.+.+++++|++|||.|+|++|++++|+|+..|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999987888999999999999999999999999999996799999999999999999999
Q ss_pred EEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEe
Q 018072 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGT 321 (361)
Q Consensus 243 ~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~ 321 (361)
+++++.+.+ +.+.++.++++++|++||++|.+..+..++++++++ |+++.+|.......+.++...++ +++++.|+
T Consensus 239 ~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 999876654 777888877668999999999888999999999998 99999997653334555555444 99999999
Q ss_pred eecCCCcCCcHHHHHHHHHcCCcccC
Q 018072 322 FFGNYKPRTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~~~ 347 (361)
+.+++...++++++++++++++++++
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~ 341 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVD 341 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCch
Confidence 88765545789999999999999654
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.5e-50 Score=386.73 Aligned_cols=335 Identities=50% Similarity=0.924 Sum_probs=277.5
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++..+++.++++++|.|+|.++||+|||.++|+|++|++++.|..+...+|.++|||++|+|+++|++++.|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 89999999887799999999999999999999999999999999988765556799999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|++.+..+|+.|.+|+.++.+.|.+......+|.. .+|..++.++|.++.+..+.|+|+||+++|.+.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999999999999999999999999875432222322 2222223333433333334579999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998788899999999999999999999999999998779999999999999999999999987653
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 330 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 330 (361)
+.++.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+.+....++++..+.|++.+....+.
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 33366777777766899999999988889999999987229999999865333344444444445567888765544456
Q ss_pred cHHHHHHHHHcCCccc
Q 018072 331 DLPSVVDMYMNKVIRF 346 (361)
Q Consensus 331 ~~~~~~~~~~~~~l~~ 346 (361)
++++++++++++++++
T Consensus 321 ~~~~~~~~~~~g~i~~ 336 (368)
T TIGR02818 321 ELPGIVEQYMKGEIAL 336 (368)
T ss_pred HHHHHHHHHHCCCCCc
Confidence 8999999999998854
No 8
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.9e-50 Score=386.44 Aligned_cols=337 Identities=77% Similarity=1.276 Sum_probs=281.9
Q ss_pred ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
+|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 69999999988889999999999999999999999999999999998876656779999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|++.+..+|++|+.|..++++.|.+.......|....++...+...|....++...|+|+||++++.+.++++|++++
T Consensus 82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~ 161 (369)
T cd08301 82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP 161 (369)
T ss_pred CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence 99999999999999999999999999865432222211111111111222222222346899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
+++++++++++.|+|+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++.++++..
T Consensus 162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 241 (369)
T cd08301 162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD 241 (369)
T ss_pred HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence 99999999999999998888889999999999999999999999999999878999999999999999999999988765
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC-CCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD-GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 328 (361)
.+..+.+.+++++++++|++||++|++..+..+++++++ + |+++++|.......+++.+..+++++++.|++.+++..
T Consensus 242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 322366777777766899999999987888999999998 5 99999998764344555554455899999998877765
Q ss_pred CCcHHHHHHHHHcCCcccC
Q 018072 329 RTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~~ 347 (361)
+.+++++++++.++++++.
T Consensus 321 ~~~~~~~~~~~~~g~~~~~ 339 (369)
T cd08301 321 KTDLPNLVEKYMKKELELE 339 (369)
T ss_pred HHHHHHHHHHHHcCCCCcH
Confidence 6789999999999988653
No 9
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2e-50 Score=387.68 Aligned_cols=340 Identities=53% Similarity=1.028 Sum_probs=280.1
Q ss_pred cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCC
Q 018072 7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
-|.+|||+++.++++++.++++|.|.|+++||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|++++.
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 86 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED 86 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence 578999999999987789999999999999999999999999999999888653 2357899999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccC--CCccccccCcccceeeEEEeccceEE
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN--GEPVNHFLGTSTFSEYTVVHSGCVAK 163 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~--g~~~~~~~~~G~~ae~v~v~~~~~~~ 163 (361)
|++||+|++.+..+|+.|..|++++++.|.+....+-.+....+|...+... +..+.++...|+|+||+++|.+.+++
T Consensus 87 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~ 166 (381)
T PLN02740 87 LKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVK 166 (381)
T ss_pred CCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEE
Confidence 9999999999999999999999999999998654311000000111111000 00111122246999999999999999
Q ss_pred CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072 164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (361)
Q Consensus 164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~ 243 (361)
+|+++++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.
T Consensus 167 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 246 (381)
T PLN02740 167 IDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITD 246 (381)
T ss_pred CCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcE
Confidence 99999999999999999999998778889999999999999999999999999999867999999999999999999999
Q ss_pred EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeee
Q 018072 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF 323 (361)
Q Consensus 244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~ 323 (361)
++++.+.+.++.+.++.++++++|++||++|++..+..+++++++++|+++++|.......+++.+..+++++++.|++.
T Consensus 247 ~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 326 (381)
T PLN02740 247 FINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVF 326 (381)
T ss_pred EEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEec
Confidence 99876543347777887776689999999999889999999998822999999987644445555554558999999988
Q ss_pred cCCCcCCcHHHHHHHHHcCCccc
Q 018072 324 GNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
+++....+++++++++.++++++
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~i~~ 349 (381)
T PLN02740 327 GDFKGKSQLPNLAKQCMQGVVNL 349 (381)
T ss_pred CCCCcHHHHHHHHHHHHcCCCCh
Confidence 77655567899999999998865
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-49 Score=380.91 Aligned_cols=337 Identities=57% Similarity=0.991 Sum_probs=279.4
Q ss_pred ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
+|||+++..++++++++++|.|.|+++||+|||+++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 69999999888779999999999999999999999999999999988876555689999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|++.+..+|+.|.+|++++++.|.+.......|.. .+|-..+..+|.+..+..+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999875322111221 112111222233333333457999999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
+++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++.+
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999999878889999999999999999999999999999877999999999999999999999998766
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcC
Q 018072 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 329 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 329 (361)
.++++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|.......+.+.+..+.++.++.|+..+.+..+
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 43347778888777789999999998788999999997733999999976433334444444445567888877776667
Q ss_pred CcHHHHHHHHHcCCcccC
Q 018072 330 TDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 330 ~~~~~~~~~~~~~~l~~~ 347 (361)
+++++++++++++++++.
T Consensus 321 ~~~~~~~~~~~~g~l~~~ 338 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVD 338 (368)
T ss_pred HHHHHHHHHHHcCCCChh
Confidence 889999999999998653
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.2e-49 Score=375.60 Aligned_cols=325 Identities=37% Similarity=0.627 Sum_probs=273.4
Q ss_pred ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
||||+++.+++++++++++|.|+|+++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 699999999998899999999999999999999999999999999887543 3578999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|++.+..+|+.|+.|..++.+.|.+.... .......+| .......+.|+|+||+.+|++.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 9999999999999999999999999753211 000000001 0000001246899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
+++++.+++++.++|+++.+.+.+++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++++..
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988777888999999999999999999999999999966999999999999999999999998866
Q ss_pred CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072 250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK 327 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~ 327 (361)
.+ +.+.+..++++ ++|++||++|+++.+..++++++++ |+++.+|.......+.+++..++ +++++.+++.+...
T Consensus 231 ~~--~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 TD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred cC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 54 77788888876 8999999999888999999999998 99999998653334455554444 89999998765444
Q ss_pred cCCcHHHHHHHHHcCCcccC
Q 018072 328 PRTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~~ 347 (361)
..++++++++++++|++++.
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~ 327 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLD 327 (358)
T ss_pred cHHHHHHHHHHHHcCCCCch
Confidence 46789999999999998653
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.2e-48 Score=374.68 Aligned_cols=334 Identities=57% Similarity=1.037 Sum_probs=272.2
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
..|||+++.++++.++++++|.|.|+++||+|||.++|+|++|++.+.+.. .+|.++|||++|+|+++|++++.|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 469999999988669999999999999999999999999999999887632 46889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|++.+..+|++|++|+++++++|.+.... ..|....+....|...|..+.++...|+|+||+.+|++.++++|+++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 99999999999999999999999999874321 01111011111111222221112234699999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
++++++.+++++.++|+++++.+++++|++|||+|+|++|++++|+|+++|+..|++++++++|+++++++|+++++++.
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~ 246 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence 99999999888899998877778899999999999999999999999999986799999999999999999999999876
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 328 (361)
+.+.++.+.+++++.+++|++||++|.+..+..+++.+++++|+++.+|.......+......+++++++.|++.+.+..
T Consensus 247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 326 (378)
T PLN02827 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKP 326 (378)
T ss_pred ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCch
Confidence 53334777788777668999999999977889999999982299999998653333322223345999999998776655
Q ss_pred CCcHHHHHHHHHcCCccc
Q 018072 329 RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~ 346 (361)
..++++++++++++++++
T Consensus 327 ~~~~~~~~~~~~~g~i~~ 344 (378)
T PLN02827 327 KSDLPSLVDKYMNKEIMI 344 (378)
T ss_pred hhhHHHHHHHHHcCCCCh
Confidence 568999999999999865
No 13
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.3e-48 Score=367.80 Aligned_cols=313 Identities=30% Similarity=0.394 Sum_probs=254.7
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|++++++.++...++++.+.|.+.++||+|||.++|||+||++++.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 67888888776344778877778999999999999999999999999776666666 99999999999999 77789999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE-CCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK-INPLA 168 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~-iP~~~ 168 (361)
|||++.|..+|+.|++|+.|.+++|.+..+....... ..-.|+|+||+.+|.++.++ +|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~-----------------~~~~G~~aEyv~vp~~~~~~~~pd~~ 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLG-----------------GGIDGGFAEYVRVPADFNLAKLPDGI 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCcccccccccc-----------------CCCCCceEEEEEeccccCeecCCCCC
Confidence 9999999999999999999999999976544111111 00124999999999755555 58888
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNT 247 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~ 247 (361)
..+++++..++.++|++.......+++++|+|+|+|++|++++++|+..|+.+|+++|.+++|++++++ .|++.+++.
T Consensus 143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~ 221 (350)
T COG1063 143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP 221 (350)
T ss_pred -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence 455555555999998875455556666699999999999999999999999999999999999999999 566666555
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN 325 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~ 325 (361)
...+ ....+.+++++ ++|++|||+|.+.++.++++.++++ |+++++|....... .++...++ |++++.|++..
T Consensus 222 ~~~~--~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~- 296 (350)
T COG1063 222 SEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP- 296 (350)
T ss_pred cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC-
Confidence 4433 66778888888 9999999999999999999999998 99999999875543 33343344 99999999532
Q ss_pred CCcCCcHHHHHHHHHcCCcccCC
Q 018072 326 YKPRTDLPSVVDMYMNKVIRFSS 348 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~~~ 348 (361)
..+.+++.+++++.+|++++.+
T Consensus 297 -~~~~~~~~~~~ll~~g~i~~~~ 318 (350)
T COG1063 297 -SGREDFERALDLLASGKIDPEK 318 (350)
T ss_pred -CCcccHHHHHHHHHcCCCChhH
Confidence 2257899999999999997753
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=9.1e-48 Score=367.30 Aligned_cols=333 Identities=58% Similarity=0.988 Sum_probs=276.3
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
++|||+++.+.+++++++++|.|.|.++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 3589999998887799999999999999999999999999999999887554 567899999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|++.+..+|++|..|..+.+++|.+..+... |.. .++...+...|.....+.+.|+|+||+.++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANES-GLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccccc-ccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 9999999999999999999999999998664411 221 11111111122222222235789999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
++++++.+++++.|||+++.+.+.+++|++|+|+|+|++|++++|+|+++|+.+|++++++++|++.++++|++++++..
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999877888999999999999999999999999999987799999999999999999999998876
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC-CCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD-GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 327 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 327 (361)
..+..+.+.++.++++++|+|||++|++..+..+++++++ + |+++.+|.... ...++++..+++++++.|++.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~ 315 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGW-GVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFK 315 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCC-CEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCC
Confidence 5433356677777767899999999987888999999977 5 99999997652 2334444444468999999887765
Q ss_pred cCCcHHHHHHHHHcCCccc
Q 018072 328 PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~ 346 (361)
.+.++++++++++++++++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~ 334 (365)
T cd08277 316 SRSDVPKLVSKYMNKKFDL 334 (365)
T ss_pred hHHHHHHHHHHHHCCCcCh
Confidence 5668999999999887754
No 15
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.4e-47 Score=360.85 Aligned_cols=305 Identities=30% Similarity=0.455 Sum_probs=261.4
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++.+++. ++++++|.|+|+++||+|||.++++|++|++.+.+.... ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998876 999999999999999999999999999999987665332 2358899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|++.+..+|+.|+.|+.|+++.|.+... .+|.. ..|+|+||+++|.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-------------------~~G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-------------------RDGGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-------------------CCCcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999986543 11211 135899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
+++++.+++++.|||+++ +...+++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999996 5678899999999999999999999999999955999999999999999999999998765
Q ss_pred CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072 250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 328 (361)
.+ .+.+.+++++ ++|++||++|++..+..++++++++ |+++.+|.... ..++.....+++++++.|++.++
T Consensus 218 ~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 DD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred ch---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence 43 4556666666 8999999999977788999999998 99999997653 23332223344999999988654
Q ss_pred CCcHHHHHHHHHcCCccc
Q 018072 329 RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~ 346 (361)
.+++++++++++++++++
T Consensus 290 ~~~~~~~~~~~~~g~i~~ 307 (339)
T cd08239 290 VPDMEECAEFLARHKLEV 307 (339)
T ss_pred HHHHHHHHHHHHcCCCCh
Confidence 368999999999998854
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=9.1e-47 Score=357.48 Aligned_cols=304 Identities=23% Similarity=0.340 Sum_probs=251.5
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccc-cCCC--CCCCCcccccceeEEEEEeCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
..|||+++.++++ ++++++|.| +.++||||||.++|||++|++++. |... ..++|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 6789999999988 999999998 689999999999999999999875 3322 2357999999999999999 6789
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
|++||+|++.+..+|+.|++|+.++++.|++..+. |....+ ....|+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---GSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCccee---eccccc--------------CCCCCceeeeEEechHHeEECC
Confidence 99999999999999999999999999999986543 221000 0113599999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
+++++++++.. .++.+||+++ ......+|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++
T Consensus 142 ~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99998776644 4788999986 445666899999999999999999999999997899999999999999999999999
Q ss_pred cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 324 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~ 324 (361)
++.+.+ +.+... ..+++|++||++|++..+..++++++++ |+++.+|....... ++...+ .|++++.|++..
T Consensus 220 ~~~~~~--~~~~~~--~~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 220 NPQNDD--LDHYKA--EKGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPE--FPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred cCCccc--HHHHhc--cCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCc--cCHHHHHhCCcEEEEEeec
Confidence 876644 433222 1236999999999988899999999998 99999997553333 334434 499999998743
Q ss_pred CCCcCCcHHHHHHHHHcCCccc
Q 018072 325 NYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.+++++++++++++++++
T Consensus 293 ----~~~~~~~~~l~~~g~i~~ 310 (343)
T PRK09880 293 ----TEEFNTAVSWLANGVINP 310 (343)
T ss_pred ----cccHHHHHHHHHcCCCCc
Confidence 368999999999999865
No 17
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=8.3e-47 Score=352.88 Aligned_cols=285 Identities=28% Similarity=0.397 Sum_probs=248.1
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++.+.+.+ ++++++|.|+|++|||||||.++|||+.|.+.+.|. .+..++|+++|.|++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999998876 889999999999999999999999999999999986 33456899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+... ..| ..|+||||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~~---------------------------------------------~~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GVG---------------------------------------------RDGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CCC---------------------------------------------CCCcceeEEEecHHHceeCCCC
Confidence 999998652 000 1259999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+|+++||++++++.|||+++.+..++++|++|||+|+ |++|.+++|+|+++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999986 9999999999999998 6777777788888999999999999
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~ 324 (361)
+.+.+ +.+.+++++++ ++|+|+|++|+ +.+..+++.|+++ |+++.+|...+.....++...++ +.+++.|.+..
T Consensus 194 y~~~~--~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YREED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCccc--HHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 98887 99999999998 99999999999 7888999999998 99999998764334444444444 88888888866
Q ss_pred CC---CcCCcHHHHHHHHHcCCccc
Q 018072 325 NY---KPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 325 ~~---~~~~~~~~~~~~~~~~~l~~ 346 (361)
.. ...+.++++.+++++|++++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l~~ 294 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKLKP 294 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCCcc
Confidence 54 12345677899999999864
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=3.3e-46 Score=358.72 Aligned_cols=314 Identities=23% Similarity=0.312 Sum_probs=247.1
Q ss_pred ceeEEEeecCCCCeEEEEeecCCCC-------CCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072 10 TCKAAVAWEAGKPLIIQDVEVAPPQ-------AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82 (361)
Q Consensus 10 ~m~a~~~~~~~~~~~~~~~~~p~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~ 82 (361)
.|||+++.++++ ++++++|.|+|+ ++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 499999999987 999999999874 68999999999999999999987543 356899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCC---cccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP---VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 159 (361)
Q Consensus 83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~---~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~ 159 (361)
|++|++||||++.+..+|+.|++|++|++++|.+..... .+|.... ....|+|+||+++|..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~---------------~~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM---------------GGWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc---------------CCCCCceEEEEEechh
Confidence 999999999999999999999999999999999743210 0111000 0012589999999964
Q ss_pred --ceEECCCCCCh----hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 018072 160 --CVAKINPLAPL----DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 233 (361)
Q Consensus 160 --~~~~iP~~~~~----~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~ 233 (361)
.++++|++++. .+++.+.+++.++|+++ +..++++|++|||.|+|++|++++|+|+.+|+..|++++++++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998753 34667777899999986 568899999999998999999999999999996677778889999
Q ss_pred HHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCCh--------------HHHHHHHHHhcCCCcEEEEEcC
Q 018072 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI--------------DNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 234 ~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
++++++|++. +++.... ++.+.+.+++++ ++|++||++|.+ .+++.+++.++++ |+++.+|.
T Consensus 224 ~~a~~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 224 AQARSFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHHcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 9999999974 4443221 266777777776 899999999985 4899999999998 99999998
Q ss_pred CCC-Cc-e---------eecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcccC
Q 018072 299 PSK-DA-V---------FMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 299 ~~~-~~-~---------~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~~ 347 (361)
... .. . +.+.... +.+++++.|.. ....+.+.++++++++++++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~ 358 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIA 358 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHH
Confidence 632 11 1 1121222 22667776532 1112234789999999998653
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.5e-46 Score=354.09 Aligned_cols=313 Identities=20% Similarity=0.312 Sum_probs=255.7
Q ss_pred ccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018072 6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 6 ~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
..|+++.++.+.+..+.+++.+++.|.|+++||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 47888999999888777999999999999999999999999999999998876544567999999999999999999999
Q ss_pred CCCCCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072 86 LEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (361)
Q Consensus 86 ~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i 164 (361)
|++||+|++.+. .+|+.|++|+.|+++.|++..+... +.. .+| . ...|+|+||+++|.+.++++
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~-~~~-~~g---~----------~~~G~~aey~~v~~~~~~~l 152 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYN-SIG-HDG---T----------KNYGGYSDMIVVDQHFVLRF 152 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCcccccc-ccc-cCC---C----------cCCCccceEEEEchHHeeeC
Confidence 999999986554 4899999999999999987543200 000 000 0 01258999999999999999
Q ss_pred CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHHcCCCE
Q 018072 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD 243 (361)
Q Consensus 165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~~~~G~~~ 243 (361)
|+++++++++.+++++.|+|+++.+...+++|++|||.|+|++|++++|+|+++|+ +|++++.++++ .+.++++|++.
T Consensus 153 P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~ 231 (360)
T PLN02586 153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADS 231 (360)
T ss_pred CCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcE
Confidence 99999999999999999999987666667899999999999999999999999999 77777666655 45667899999
Q ss_pred EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF 322 (361)
Q Consensus 244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~ 322 (361)
++++.+. +.++..++ ++|++||++|++..+..++++++++ |+++.+|....... ++...++ +++.+.|++
T Consensus 232 vi~~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~--~~~~~~~~~~~~i~g~~ 302 (360)
T PLN02586 232 FLVSTDP-----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKPLE--LPIFPLVLGRKLVGGSD 302 (360)
T ss_pred EEcCCCH-----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCCCc--cCHHHHHhCCeEEEEcC
Confidence 8876542 23444443 6999999999877899999999998 99999997643323 3333333 888888887
Q ss_pred ecCCCcCCcHHHHHHHHHcCCccc
Q 018072 323 FGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.++ ..+++++++++++|++++
T Consensus 303 ~~~---~~~~~~~~~li~~g~i~~ 323 (360)
T PLN02586 303 IGG---IKETQEMLDFCAKHNITA 323 (360)
T ss_pred cCC---HHHHHHHHHHHHhCCCCC
Confidence 654 367999999999999864
No 20
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=6.5e-44 Score=341.52 Aligned_cols=335 Identities=50% Similarity=0.854 Sum_probs=272.6
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
.+|||+++..++++++++++|.|+|.++||+|||+++|+|++|++.+.|... ..+|.++|||++|+|+++|++++.+++
T Consensus 6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 84 (373)
T cd08299 6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKP 84 (373)
T ss_pred ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCC
Confidence 5699999999887799999999999999999999999999999999887652 356889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|++.+..+|++|.+|+.++++.|.+.......|.. .++..+....|.+..++.+.|+|+||++++.+.++++|+++
T Consensus 85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 99999999999999999999999999875432111221 11111111122222233345799999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
++++++++++++.+||+++.+.+.+++|++|+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++..
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~ 243 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ 243 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence 99999999999999999887888999999999999899999999999999986799999999999999999999988876
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHh-cCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 327 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 327 (361)
+.+.++.+.+..++.+++|+++|++|++..+..++..+ +++ |+++.+|.......+++.+..+.++.++.+++.+.+.
T Consensus 244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 322 (373)
T cd08299 244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWK 322 (373)
T ss_pred ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCc
Confidence 53323566666666668999999999877888877765 466 9999999765333455555444578899999887765
Q ss_pred cCCcHHHHHHHHHcCCccc
Q 018072 328 PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~ 346 (361)
.++++.++++++.++.+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~ 341 (373)
T cd08299 323 SKDSVPKLVADYMAKKFNL 341 (373)
T ss_pred cHHHHHHHHHHHHcCCCCc
Confidence 5577888888887776544
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2e-44 Score=342.24 Aligned_cols=304 Identities=24% Similarity=0.432 Sum_probs=257.8
Q ss_pred EEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018072 14 AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (361)
Q Consensus 14 ~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V 92 (361)
+++.+++++++++++|.|.|+++||+|||.++|+|++|++.+.+. .+...+|.++|||++|+|+++|+++..+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 567788877899999999999999999999999999999886433 2334678999999999999999999887 99999
Q ss_pred eecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC------
Q 018072 93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------ 166 (361)
Q Consensus 93 ~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~------ 166 (361)
++.+..+|++|..|+.++++.|.+.... |.. ..|+|+||+.+|.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMP---GND-------------------MQGGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCcc---CcC-------------------CCCcccceEEechHHeEECCccccccc
Confidence 9999999999999999999999865433 211 124899999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
++++++++.+++++.|+|+++ ....+++|++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 899999999988999999986 45789999999999999999999999999999 8999999999999999999999988
Q ss_pred CCCCC-ccHHHHHHHHcCC-Ccc----EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEE
Q 018072 247 TSEHD-RPIQEVIAEMTNG-GVD----RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLK 319 (361)
Q Consensus 247 ~~~~~-~~~~~~i~~~~~~-g~D----vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~ 319 (361)
+.+.+ .++.+.+++++++ ++| ++||++|++..+..++++++++ |+++++|.......+ +...++ +++++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~--~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEY--RLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCccc--CHHHHhhcccEEE
Confidence 76542 2366777777776 776 8999999988888999999998 999999986533333 333343 788998
Q ss_pred EeeecCCCcCCcHHHHHHHHHcCCcccCC
Q 018072 320 GTFFGNYKPRTDLPSVVDMYMNKVIRFSS 348 (361)
Q Consensus 320 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 348 (361)
|++.++ .++++++++++++|++++.+
T Consensus 294 g~~~~~---~~~~~~~~~~i~~g~i~~~~ 319 (349)
T TIGR03201 294 GNWGCP---PDRYPAALDLVLDGKIQLGP 319 (349)
T ss_pred EEecCC---HHHHHHHHHHHHcCCCCccc
Confidence 887543 46899999999999997654
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.2e-44 Score=344.35 Aligned_cols=306 Identities=22% Similarity=0.326 Sum_probs=246.4
Q ss_pred EEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018072 13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (361)
Q Consensus 13 a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V 92 (361)
++++.+.++.+++.+++.|.|+++||+|||.++|||++|++++.|......+|.++|||++|+|+++|+++++|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 34444444458888999999999999999999999999999988765434568999999999999999999999999999
Q ss_pred eecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChh
Q 018072 93 LPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD 171 (361)
Q Consensus 93 ~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~ 171 (361)
++.+.. +|+.|.+|++|+++.|.+..+... + .+..| ....|+|+||+++|++.++++|++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~-~-~~~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~ 153 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYN-S-RSSDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSD 153 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCcccccc-c-cccCC-------------CcCCCccccEEEEchHHeEECCCCCCHH
Confidence 877665 699999999999999997643200 0 00000 0013589999999999999999999999
Q ss_pred hhhccccchhhhhhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCCEEEcCCC
Q 018072 172 KVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 172 ~aa~l~~~~~ta~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~~~~G~~~vv~~~~ 249 (361)
+++.++++..|+|+++..... .++|++|+|.|+|++|++++|+|+++|+ +|++++.+++ +.+.++++|+++++++.+
T Consensus 154 ~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~ 232 (375)
T PLN02178 154 SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD 232 (375)
T ss_pred HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC
Confidence 999999999999998644332 4689999999999999999999999999 7888877654 478888999999887654
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCCCc
Q 018072 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKP 328 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~ 328 (361)
. +.+.+.++ ++|++||++|.+..+..++++++++ |+++.+|..... ..++...+ ++++++.|++.+.
T Consensus 233 ~-----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~--- 300 (375)
T PLN02178 233 S-----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKP--LDLPIFPLVLGRKMVGGSQIGG--- 300 (375)
T ss_pred H-----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCC--CccCHHHHHhCCeEEEEeCccC---
Confidence 2 24444443 7999999999977889999999998 999999976533 33334433 4999999988655
Q ss_pred CCcHHHHHHHHHcCCccc
Q 018072 329 RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~ 346 (361)
.++++++++++++|++++
T Consensus 301 ~~~~~~~~~l~~~g~i~~ 318 (375)
T PLN02178 301 MKETQEMLEFCAKHKIVS 318 (375)
T ss_pred HHHHHHHHHHHHhCCCcc
Confidence 367999999999999864
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.8e-44 Score=342.03 Aligned_cols=300 Identities=26% Similarity=0.335 Sum_probs=239.0
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++..++.+++++++|.|+|+++||||||+++|||++|++++.|.++. ..+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 789999865434999999999999999999999999999999999886532 235789999999999999999 9999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|++.+..+|+.|+.|++|+++.|.+..+. ..|... ..|+|+||+++|++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~------------------~~G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKG------------------LHGFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCC------------------CCccceeEEEeccccEEECCCC
Confidence 999999999999999999999999999865432 012110 1258999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhh------hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHH
Q 018072 168 APLDKVCILSCGVSTGLGATLN------VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKK 238 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~------~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~---~~~~~~~~~~ 238 (361)
++ + ++.+..++.+++.++.. ..++++|++|+|+|+|++|++++|+|+++|+ +|+++++ +++|++++++
T Consensus 141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 4 34444466665554321 2236789999999999999999999999999 7999987 6889999999
Q ss_pred cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-----hhhhc
Q 018072 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-----PINVL 313 (361)
Q Consensus 239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-----~~~~~ 313 (361)
+|++. +++.+.+ +.+ .. ..+++|+|||++|++..+..+++.++++ |+++++|.......++++ ...++
T Consensus 218 ~Ga~~-v~~~~~~--~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSKTP--VAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCccc--hhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99986 5554433 333 21 2248999999999977899999999998 999999987642333343 12234
Q ss_pred cccEEEEeeecCCCcCCcHHHHHHHHHcCC
Q 018072 314 NERTLKGTFFGNYKPRTDLPSVVDMYMNKV 343 (361)
Q Consensus 314 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 343 (361)
|++++.|++.++ +++++++++++.+++
T Consensus 291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~ 317 (355)
T cd08230 291 GNKALVGSVNAN---KRHFEQAVEDLAQWK 317 (355)
T ss_pred cCcEEEEecCCc---hhhHHHHHHHHHhcc
Confidence 999999987544 468899999988766
No 24
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=9.6e-44 Score=337.33 Aligned_cols=307 Identities=23% Similarity=0.350 Sum_probs=253.6
Q ss_pred eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++.++++ +++++.|.|+| .++||+|||.++|+|++|+..+..... ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 79999999886 99999999997 589999999999999999875322111 2358899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|++.+..+|+.|++|..|.++.|.+..+. |.. ..|+|+||+.+|.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFI---GSR-------------------RDGGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCccee---ccC-------------------CCCccceeEEeehHHeEECcCCCC
Confidence 9999999999999999999999999865433 211 135899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
+++++.+. ++.++|++ .+...+++|++|+|+|+|++|++++|+|+++|++.|+++++++++++.++++|+++++++..
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998875 56678887 46678899999999999999999999999999966899999999999999999999988765
Q ss_pred CCccHHHHHHHHcCC-Ccc-EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeec-Ch-hhhccccEEEEeeecC
Q 018072 250 HDRPIQEVIAEMTNG-GVD-RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KP-INVLNERTLKGTFFGN 325 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~-g~D-vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~-~~~~~~~~l~g~~~~~ 325 (361)
.+ .+.+..++.+ ++| ++|||+|++..+..++++++++ |+++++|.......++. +. ..+.+++++.|++.+.
T Consensus 215 ~~---~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 MS---APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred cC---HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence 43 2345566655 888 9999999988999999999998 99999997653322221 11 2234899999988653
Q ss_pred CC--cCCcHHHHHHHHHcCCcccC
Q 018072 326 YK--PRTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 326 ~~--~~~~~~~~~~~~~~~~l~~~ 347 (361)
.. .+++++++++++++++++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~ 314 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLE 314 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCch
Confidence 22 24678999999999988543
No 25
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=4.7e-44 Score=336.82 Aligned_cols=294 Identities=22% Similarity=0.296 Sum_probs=247.9
Q ss_pred EEEeecCCC----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 13 AAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 13 a~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
|+++.++|. .++++++|.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 355666653 3889999999999999999999999999999999886554455789999999999999999999999
Q ss_pred CCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 89 GDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 89 Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
||+|++.+. .+|+.|++|+.++++.|.+..+. |.. ..|+|+||+.+|.+.++++|++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~ 138 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYT---GWD-------------------TDGGYAEYTTVPAAFAYRLPTG 138 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCcccC---Ccc-------------------cCCcceeEEEeccccEEECCCC
Confidence 999987664 47999999999999999876543 321 1248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
+++++++.+++++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++.
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~ 216 (329)
T TIGR02822 139 YDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGA 216 (329)
T ss_pred CCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccc
Confidence 99999999999999999997 46889999999999999999999999999999 79999999999999999999998875
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCC
Q 018072 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY 326 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~ 326 (361)
.+.. .+++|+++++.+.++.+..++++++++ |+++.+|..... ...++... +++++++.|++...
T Consensus 217 ~~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~- 282 (329)
T TIGR02822 217 YDTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSNT- 282 (329)
T ss_pred cccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecCC-
Confidence 4321 126899999998888999999999997 999999975322 12233333 34899999887543
Q ss_pred CcCCcHHHHHHHHHcCCccc
Q 018072 327 KPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~~ 346 (361)
+.++.+++++++++++++
T Consensus 283 --~~~~~~~~~l~~~g~i~~ 300 (329)
T TIGR02822 283 --RADAREFLELAAQHGVRV 300 (329)
T ss_pred --HHHHHHHHHHHHhCCCee
Confidence 467889999999998853
No 26
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.3e-43 Score=337.67 Aligned_cols=309 Identities=22% Similarity=0.333 Sum_probs=253.7
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
..++|+++++++.++++++++.|+|+++||+|||.++++|++|++.+.|......+|.++|||++|+|+++|++++.|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 44999999999988999999999999999999999999999999998876544457899999999999999999999999
Q ss_pred CCEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 89 GDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 89 Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
||+|++.+.. .|++|+.|++++.+.|.+..+.. +.....| ....|+|+||+++|.+.++++|++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~--~~~~~~g-------------~~~~G~~aey~~v~~~~~~~iP~~ 152 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSY--NDVYTDG-------------KPTQGGFASAMVVDQKFVVKIPEG 152 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccc--cccccCC-------------ccCCCccccEEEEchHHeEECCCC
Confidence 9999866544 69999999999999998753220 0000000 112358999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~ 246 (361)
+++++++.+++++.|||+++.+....++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++.+++
T Consensus 153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~ 231 (357)
T PLN02514 153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV 231 (357)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence 99999999999999999997666667899999999999999999999999999 788787777766555 5699988776
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecC
Q 018072 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN 325 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~ 325 (361)
..+. +.+...+. ++|++||++|....+..++++++++ |+++.+|..... ..++...+ ++++++.|++.+.
T Consensus 232 ~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~ 302 (357)
T PLN02514 232 SSDA-----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTP--LQFVTPMLMLGRKVITGSFIGS 302 (357)
T ss_pred CCCh-----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCC--CcccHHHHhhCCcEEEEEecCC
Confidence 5432 23344433 7999999999877899999999998 999999986533 23334333 4999999998665
Q ss_pred CCcCCcHHHHHHHHHcCCcc
Q 018072 326 YKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~ 345 (361)
..+++++++++++++++
T Consensus 303 ---~~~~~~~~~~~~~g~l~ 319 (357)
T PLN02514 303 ---MKETEEMLEFCKEKGLT 319 (357)
T ss_pred ---HHHHHHHHHHHHhCCCc
Confidence 36799999999999874
No 27
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=5.6e-43 Score=334.25 Aligned_cols=332 Identities=49% Similarity=0.866 Sum_probs=284.2
Q ss_pred eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (361)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~ 91 (361)
||+++.+.+.++++++++.|.++++||+|||.++++|++|++.+.+... ...|.++|||++|+|+++|++++.+++||+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDK 80 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence 6889998887799999999999999999999999999999998877543 346789999999999999999999999999
Q ss_pred EeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChh
Q 018072 92 VLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD 171 (361)
Q Consensus 92 V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~ 171 (361)
|++.+...|++|.+|+.+..++|....+....|.. .+|...|..+|.+..++.+.|+|++|+.++.+.++++|++++++
T Consensus 81 Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 81 VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 99999999999999999999999887665332332 45556666677777777777899999999999999999999999
Q ss_pred hhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC
Q 018072 172 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 251 (361)
Q Consensus 172 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~ 251 (361)
+++.+++++.+||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+..|+++++++++++.++++|++++++....+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 239 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence 99999999999999988888999999999998899999999999999996688898899999999999999988876652
Q ss_pred ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhc-CCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCC
Q 018072 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 330 (361)
Q Consensus 252 ~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 330 (361)
.++.+.+..++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|++.+++...+
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 318 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD 318 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence 236777777775689999999997788999999999 97 9999998754223344444444678889998887776678
Q ss_pred cHHHHHHHHHcCCccc
Q 018072 331 DLPSVVDMYMNKVIRF 346 (361)
Q Consensus 331 ~~~~~~~~~~~~~l~~ 346 (361)
++.+++++++++.+++
T Consensus 319 ~~~~~~~l~~~~~l~~ 334 (365)
T cd05279 319 SVPKLVALYRQKKFPL 334 (365)
T ss_pred HHHHHHHHHHcCCcch
Confidence 8999999999998764
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=9e-43 Score=331.13 Aligned_cols=304 Identities=30% Similarity=0.478 Sum_probs=260.5
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---C--------CCCCCcccccceeEEEEEe
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---Q--------TPLFPRIFGHEAAGVVESV 79 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~--------~~~~p~~~G~e~~G~V~~~ 79 (361)
|||+++.++++ ++++++|.|+|.++||+|||.++++|++|+..+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 79999998886 9999999999999999999999999999987654321 1 0136889999999999999
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072 80 GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 159 (361)
Q Consensus 80 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~ 159 (361)
|++++.|++||+|+..+..+|++|.+|++++.+.|.+..+. |.. ...|+|+||+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI---GLG------------------GGGGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee---ccC------------------CCCCceeeEEEechH
Confidence 99999999999999999999999999999999999865432 211 012589999999999
Q ss_pred ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 018072 160 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 239 (361)
Q Consensus 160 ~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~ 239 (361)
.++++|+++++++++.+ .++.|||+++ ...++++|++|+|+|+|.+|++++|+|+.+|+.+|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998876 5788999996 778899999999999999999999999999987899999999999999999
Q ss_pred CCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccE
Q 018072 240 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERT 317 (361)
Q Consensus 240 G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 317 (361)
|++.++++.+.+ +.+.+++++++ ++|++||++|.+..++.++++++++ |+++.+|..... ..++...++ ++++
T Consensus 217 ga~~~i~~~~~~--~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcE
Confidence 999999887655 77888888776 7999999999878899999999998 999999986533 334443334 8999
Q ss_pred EEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 318 LKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 318 l~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
+.|++.+. .+++++++++++++++++
T Consensus 292 i~g~~~~~---~~~~~~~~~~~~~g~l~~ 317 (351)
T cd08233 292 LTGSICYT---REDFEEVIDLLASGKIDA 317 (351)
T ss_pred EEEEeccC---cchHHHHHHHHHcCCCCh
Confidence 99987543 478999999999999854
No 29
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.4e-42 Score=328.09 Aligned_cols=332 Identities=39% Similarity=0.673 Sum_probs=268.9
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
++|||+++.+++.++++++.+.|.+.++||+|||.++++|++|+.++.+..+ ..+|.++|||++|+|+++|+++..+++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4699999999777799999999999999999999999999999999887554 346889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccC-CCccc-cccCcccceeeEEEeccceEECCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN-GEPVN-HFLGTSTFSEYTVVHSGCVAKINP 166 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~-g~~~~-~~~~~G~~ae~v~v~~~~~~~iP~ 166 (361)
||+|++.+. .|+.|..|+.++.++|.+.....-.|.. ++|...+... |++.. +....|+|++|+.++.+.++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998775 8999999999999999864432111111 1111111100 00000 022346899999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
++++++++.+++++.|||.++.+...+++|++|+|+|+|.+|++++|+|+++|++.|++++++++|.+.++++|++.+++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998888888999999999988999999999999999977999999999999999999999988
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecC
Q 018072 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN 325 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~ 325 (361)
+...+ +.+.+..+++.++|+++|++|++..+..++++++++ |+++.+|.........++...+ .+++++.++..+.
T Consensus 238 ~~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 238 PKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CCCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 76654 677777777449999999999878899999999998 9999999764223334444545 4899998877544
Q ss_pred CCcCCcHHHHHHHHHcCCccc
Q 018072 326 YKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~ 346 (361)
....+.+++++++++++++++
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~ 335 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPF 335 (365)
T ss_pred cChHHHHHHHHHHHHcCCCCh
Confidence 333456788999999998754
No 30
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=3.4e-42 Score=328.41 Aligned_cols=312 Identities=26% Similarity=0.414 Sum_probs=261.1
Q ss_pred eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 018072 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD------ 85 (361)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~------ 85 (361)
||+++.++++.+++++++.|.|+++||+|||.++++|++|+....|..+...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 79999999866999999999999999999999999999999988876543567889999999999999999986
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc-ceEEC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKI 164 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~-~~~~i 164 (361)
|++||+|++.+.++|+.|..|+.+..+.|.+..+. |.....+ . ....|+|+||+.++++ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~---~---------~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD---D---------PHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc---C---------CCCCcccceEEEecCCCceEEC
Confidence 99999999999999999999999999999876554 3210000 0 0113589999999986 79999
Q ss_pred CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (361)
Q Consensus 165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v 244 (361)
|++++.++++++++++.|||+++.+....++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999999988999999998666666799999999999999999999999998789999999999999999999998
Q ss_pred EcCCCCC-ccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEe
Q 018072 245 VNTSEHD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGT 321 (361)
Q Consensus 245 v~~~~~~-~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~ 321 (361)
+++...+ .++.+.+..++++ ++|++||++|+...+..++++++++ |+++.+|.........++...++ +++++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 8876543 1233567777776 8999999999877889999999998 99999997653333444443334 89999988
Q ss_pred eecCCCcCCcHHHHHHHHHcC
Q 018072 322 FFGNYKPRTDLPSVVDMYMNK 342 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~ 342 (361)
+.++ +++++++++++.++
T Consensus 306 ~~~~---~~~~~~~~~~~~~~ 323 (361)
T cd08231 306 HNYD---PSHLYRAVRFLERT 323 (361)
T ss_pred ccCC---chhHHHHHHHHHhc
Confidence 7543 46789999998877
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.5e-42 Score=326.77 Aligned_cols=284 Identities=18% Similarity=0.211 Sum_probs=228.1
Q ss_pred ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC----CCCCcccccceeEEEEEeCCCCCC
Q 018072 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
.-+|+++.++++ ++++++|.|. +++||||||.++|||++|++++.|.+.. ..+|.++|||++|+|+++|.+ .
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 368899999997 9999999995 9999999999999999999999886532 357999999999999998764 7
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
|++||||++.+..+|+ |..| +..+.|.+..+. |.. . .|+|+||+++|++.++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~---g~~-~------------------~G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR---SSG-Y------------------DGFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCccee---Eec-C------------------CCceEEEEEEchHHeEECC
Confidence 9999999999888877 4455 355678765433 211 1 2489999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhh--hcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHcCCC
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVT 242 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~~~G~~ 242 (361)
+++++++|+++. ++.++|+++.. .+.+++|++|||+|+|++|++++|+|++ .|..+|++++++++|++++++++.+
T Consensus 133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 999999887665 88899998643 3457899999999999999999999986 5655899999999999999886654
Q ss_pred EEEcCCCCCccHHHHHHHHcCC-CccEEEEccC---ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccE
Q 018072 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERT 317 (361)
Q Consensus 243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 317 (361)
..++ .+.+. ++|+|||++| .+.++..++++++++ |+++++|..... ..++...++ |+++
T Consensus 212 ~~~~-------------~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~ 275 (341)
T cd08237 212 YLID-------------DIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLT 275 (341)
T ss_pred eehh-------------hhhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceE
Confidence 3221 01122 6999999999 456889999999998 999999975433 334444344 9999
Q ss_pred EEEeeecCCCcCCcHHHHHHHHHcC
Q 018072 318 LKGTFFGNYKPRTDLPSVVDMYMNK 342 (361)
Q Consensus 318 l~g~~~~~~~~~~~~~~~~~~~~~~ 342 (361)
+.|+..++ .+++++++++++++
T Consensus 276 i~g~~~~~---~~~~~~~~~~~~~~ 297 (341)
T cd08237 276 LVGSSRST---REDFERAVELLSRN 297 (341)
T ss_pred EEEecccC---HHHHHHHHHHHHhC
Confidence 99987543 46799999999988
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.7e-41 Score=320.06 Aligned_cols=310 Identities=25% Similarity=0.335 Sum_probs=260.8
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+++. +++++.+.|.+.++||+|||.++++|++|++.+.+.......|.++|||++|+|+++|++++.+++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999986 89999999999999999999999999999998777654456689999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCCC
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA 168 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~~ 168 (361)
+|+..+..+|+.|..|..|+++.|.+.. . |+... ....|+|+||+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~-~---~~~~~---------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGML-G---GWKFS---------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCC-C---Ccccc---------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 9999888899999999999999998642 0 11100 1113589999999974 899999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
++++++.++.++.|||++ .+.+.+++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.
T Consensus 141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 999999998899999998 4778899999999998899999999999999997799999999999999999999999877
Q ss_pred CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh---ccccEEEEeeec
Q 018072 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFFG 324 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~---~~~~~l~g~~~~ 324 (361)
..+ +.+.+..++.+ ++|+++|++|++..+..++++++++ |+++.+|.......+.++...+ ++..++.+.+..
T Consensus 220 ~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 296 (351)
T cd08285 220 NGD--VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP 296 (351)
T ss_pred CCC--HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence 654 67777777665 8999999999878899999999998 9999999766433334332111 366677665432
Q ss_pred CCCcCCcHHHHHHHHHcCCccc
Q 018072 325 NYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
. .+++++++++++++|++++
T Consensus 297 ~--~~~~~~~~~~~~~~g~i~~ 316 (351)
T cd08285 297 G--GRLRMERLASLIEYGRVDP 316 (351)
T ss_pred C--ccccHHHHHHHHHcCCCCh
Confidence 2 3578999999999999876
No 33
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.4e-40 Score=315.92 Aligned_cols=330 Identities=41% Similarity=0.725 Sum_probs=270.2
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+++.+++++++|.|++.+++|+|||.++++|+.|+..+.|..+ ..+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 79999999977799999999999999999999999999999998887554 45678999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|+..+..+|++|.+|.+++.+.|.+..+. .+|.. .++..++...|.......+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-ccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999864321 00000 1111111111222222234579999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
++++++++++.+||.++.+..++++|++|+|+|+|.+|++++++|+..|+.+|+++++++++.+.++++|++++++....
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 237 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED 237 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc
Confidence 99999999999999998888899999999999889999999999999999559999999999999999999888887665
Q ss_pred CccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc
Q 018072 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP 328 (361)
Q Consensus 251 ~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~ 328 (361)
+ +...+..++++ ++|+++|++++...+..++++++++ |+++.+|.........+....+. ++..+.++.++....
T Consensus 238 ~--~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 238 D--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred c--HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 4 67777777755 8999999999767889999999998 99999987553233344444444 788888877655445
Q ss_pred CCcHHHHHHHHHcCCccc
Q 018072 329 RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~ 346 (361)
.+.++++++++++++++.
T Consensus 315 ~~~~~~~~~l~~~g~l~~ 332 (363)
T cd08279 315 RRDIPRLLDLYRAGRLKL 332 (363)
T ss_pred HHHHHHHHHHHHcCCCCc
Confidence 678899999999998764
No 34
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.1e-40 Score=314.54 Aligned_cols=301 Identities=26% Similarity=0.446 Sum_probs=256.6
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+++.+++++++|.|+++++||+|||.++++|++|+..+.|..+....|.++|||++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999965699999999999999999999999999999999887654445688999999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 91 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 91 ~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
+|++.+ ...|+.|.+|..|+++.|.+.... |.. ..|+|+||+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~---~~~-------------------~~g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT---GVT-------------------RDGGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCcc---Ccc-------------------cCCcceeEEEEchhheEeCCCCCC
Confidence 998754 458999999999999999875543 211 124899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
+++++.+++++.+||+++. ...+.++++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++++..
T Consensus 139 ~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 9999999999999999874 4589999999999999999999999999999 7999999999999999999999988766
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc
Q 018072 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP 328 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~ 328 (361)
.+ +.+.+..+ +++|+++|++|.+..+..++++++++ |+++.+|.... ..+++...++ +++++.++..+.
T Consensus 217 ~~--~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 ED--VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred cc--HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---
Confidence 54 66666555 37999999998768899999999998 99999997652 3344444344 999999987543
Q ss_pred CCcHHHHHHHHHcCCcc
Q 018072 329 RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~ 345 (361)
..+++++++++++++++
T Consensus 287 ~~~~~~~~~~~~~~~l~ 303 (333)
T cd08296 287 ALDSEDTLKFSALHGVR 303 (333)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 36788888888877664
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.5e-40 Score=311.71 Aligned_cols=300 Identities=23% Similarity=0.365 Sum_probs=251.2
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+++. ++++++|.|.|+++|++||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 78999999886 99999999999999999999999999999998887655456789999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|++.+..+|+.|..|.+++++.|.+.... +. ...|+|+||+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL---GV-------------------HRDGGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCceE---EE-------------------ccCCcceeeEEechHHeEECcCCCCH
Confidence 999999999999999999999999765432 11 11248999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
++++ +..++.++|+ +.+..++++|++|+|+|+|++|++++|+|+. +|+..|++++++++|.++++++|+++++++..
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4457888885 4577889999999999999999999999996 59977999999999999999999999998765
Q ss_pred CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072 250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK 327 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~ 327 (361)
.+ +.+.+.. .+ ++|++||++|++..+..++++++++ |+++.+|..... ..+....+. +++++.++..
T Consensus 216 ~~--~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~---- 284 (339)
T PRK10083 216 EP--LGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEP--SEIVQQGITGKELSIFSSRL---- 284 (339)
T ss_pred cc--HHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--ceecHHHHhhcceEEEEEec----
Confidence 43 5555532 23 5689999999877899999999998 999999976532 222232233 7788777653
Q ss_pred cCCcHHHHHHHHHcCCccc
Q 018072 328 PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~ 346 (361)
..+++++++++++++++++
T Consensus 285 ~~~~~~~~~~~~~~g~l~~ 303 (339)
T PRK10083 285 NANKFPVVIDWLSKGLIDP 303 (339)
T ss_pred ChhhHHHHHHHHHcCCCCh
Confidence 2467899999999998865
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=4.7e-40 Score=318.59 Aligned_cols=298 Identities=19% Similarity=0.239 Sum_probs=236.5
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhcc-ccCCC-C-----CCCCcccccceeEEEEEeCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQ-T-----PLFPRIFGHEAAGVVESVGE 81 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~-~-----~~~p~~~G~e~~G~V~~~G~ 81 (361)
|+|||+++.++++ ++++++|.|+|+++||+|||.++|||++|++.+ .|... . ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 4599999999987 999999999999999999999999999999976 44321 1 24688999999999999999
Q ss_pred CCC-CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc-
Q 018072 82 GVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG- 159 (361)
Q Consensus 82 ~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~- 159 (361)
+++ .|++||||++.+...|+.|..|. ++ |.. . .|+|+||+++|.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~~-------------g~~-~------------------~G~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-GY-------------SYT-Y------------------PGGLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-Cc-------------ccc-C------------------CCcceEEEEecHHh
Confidence 998 59999999999999999988772 10 110 1 2489999999987
Q ss_pred ---ceEECCCCCChhhhhccccchh---hhhhhh--------hhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcC--CCe
Q 018072 160 ---CVAKINPLAPLDKVCILSCGVS---TGLGAT--------LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASR 222 (361)
Q Consensus 160 ---~~~~iP~~~~~~~aa~l~~~~~---ta~~a~--------~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g--~~~ 222 (361)
.++++|+++++++++++. ++. +++.+. .+.+++++|++|+|+|+ |++|++++|+|+++| +.+
T Consensus 127 ~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~ 205 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSL 205 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCce
Confidence 689999999999988652 221 233332 24578899999999985 999999999999975 457
Q ss_pred EEEEcCChhhHHHHHHc--------CCC-EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcE
Q 018072 223 IIGVDRSSKRFEEAKKF--------GVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 292 (361)
Q Consensus 223 Vi~~~~~~~~~~~~~~~--------G~~-~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~ 292 (361)
|++++++++|++.++++ |++ .++++.+. .++.+.+++++++ ++|++||++|++..+..++++++++ |+
T Consensus 206 Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~ 283 (410)
T cd08238 206 LVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GC 283 (410)
T ss_pred EEEEcCCHHHHHHHHHhccccccccCceEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-Ce
Confidence 99999999999999997 776 46665432 2377788888877 8999999999888999999999997 88
Q ss_pred EEEEcCC-CCCceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 293 AVLVGVP-SKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 293 iv~~g~~-~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
++.++.. ......+++...++ +++++.|+..++ ..+++++++++++|++++
T Consensus 284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~ 336 (410)
T cd08238 284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNP 336 (410)
T ss_pred EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCch
Confidence 7766432 22222344444444 999999987544 468999999999999865
No 37
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=6.4e-40 Score=311.48 Aligned_cols=306 Identities=24% Similarity=0.351 Sum_probs=256.5
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---------CCCCcccccceeEEEEEeCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---------PLFPRIFGHEAAGVVESVGE 81 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---------~~~p~~~G~e~~G~V~~~G~ 81 (361)
|||++++++++ +++++.+.|++.++||+||+.++++|+.|+.++.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 79999999887 999999999999999999999999999999988775311 14677899999999999999
Q ss_pred CCC--CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072 82 GVS--DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 159 (361)
Q Consensus 82 ~v~--~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~ 159 (361)
+++ .|++||+|+..+..+|+.|..|..++.+.|....+. |.. ....|+|+||+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-----------------~~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY---GFQ-----------------NNVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccce---eec-----------------cCCCCcceeeEEcccc
Confidence 998 899999999999999999999999999999754322 221 0113589999999988
Q ss_pred -ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072 160 -CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 160 -~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~ 238 (361)
.++++|+++++++++.+ .++.|+|+++ +.+++++|++|+|.|+|.+|++++++|+++|+..|+++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 57899999999999988 7899999986 77899999999997789999999999999998778999999999999999
Q ss_pred cCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccE
Q 018072 239 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERT 317 (361)
Q Consensus 239 ~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~ 317 (361)
+|++.+++....+ +.+.+..++++ ++|++||++|++..+..++++++++ |+++.+|.......+++......++++
T Consensus 218 ~g~~~v~~~~~~~--~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCCcC--HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence 9999888876544 77777777776 8999999999767889999999998 999999875533333322221237888
Q ss_pred EEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 318 LKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 318 l~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
+.++.... ..+.+++++++++.++.
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~ 319 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPT 319 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCCh
Confidence 88876443 46889999999998865
No 38
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.1e-41 Score=288.70 Aligned_cols=285 Identities=27% Similarity=0.309 Sum_probs=246.2
Q ss_pred ccccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072 6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 83 (361)
Q Consensus 6 ~~~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v 83 (361)
+.|+..|-+++++.|.. +++++.|.|+|.++|++||-.++|+|..|..++.|.+...+.|++||-|++|+|+++|++|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 45888999999998876 8999999999999999999999999999999999999878899999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE
Q 018072 84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 163 (361)
Q Consensus 84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~ 163 (361)
+++++||||+..- ..|.|+|++.+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence 9999999998431 125899999999999999
Q ss_pred CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072 164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (361)
Q Consensus 164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~ 242 (361)
+|+.+++.+||++.+-.+|||.-+++...+++|++||++.+ |++|+++.|+++..|+ .+|++.++++|++.+++.|++
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999998899999998888899999999999965 9999999999999999 999999999999999999999
Q ss_pred EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecChhhhccccEEEE
Q 018072 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKG 320 (361)
Q Consensus 243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~l~g 320 (361)
+.++++.+| +.+.++.++++ |+|+++|.+|. +++...+.+|++. |.++.+|..++. ..++++.. --+.+++..
T Consensus 194 h~I~y~~eD--~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~l-s~k~l~lvr 268 (336)
T KOG1197|consen 194 HPIDYSTED--YVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQL-SPKALQLVR 268 (336)
T ss_pred ceeeccchh--HHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhc-Chhhhhhcc
Confidence 999999887 99999999988 99999999999 8999999999998 999999986632 22332211 115555433
Q ss_pred -eeecCCCcCCcH----HHHHHHHHcCCcc
Q 018072 321 -TFFGNYKPRTDL----PSVVDMYMNKVIR 345 (361)
Q Consensus 321 -~~~~~~~~~~~~----~~~~~~~~~~~l~ 345 (361)
+.+|....+.+| .+++.++.++.|.
T Consensus 269 psl~gYi~g~~el~~~v~rl~alvnsg~lk 298 (336)
T KOG1197|consen 269 PSLLGYIDGEVELVSYVARLFALVNSGHLK 298 (336)
T ss_pred HhhhcccCCHHHHHHHHHHHHHHhhcCccc
Confidence 334444444455 4667777777773
No 39
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2.5e-39 Score=306.76 Aligned_cols=309 Identities=32% Similarity=0.407 Sum_probs=260.7
Q ss_pred eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++.++++ +.+.+.|.|.| .++||+|||.++++|++|+..+.+..+..++|.++|||++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999999887 89999999999 89999999999999999999888876656778999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~ 167 (361)
|+|+..+..+|+.|.+|..++..+|.+..+....| ....|+|++|++++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-------------------cCCCCeeeEEEEecchhCeEEECCCC
Confidence 99999999999999999999999998754331000 1123589999999987 89999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
++.++++.+++++.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|..+|+++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999996 77889999999998889999999999999996578888889999999999999999887
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 326 (361)
...+ +.+.++.++++ ++|++||++++...+..++++|+++ |+++.+|..............+.+++++.++....
T Consensus 220 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (347)
T cd05278 220 KNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV- 295 (347)
T ss_pred Ccch--HHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence 7654 77778777765 8999999999866889999999998 99999986553322212222234788887765332
Q ss_pred CcCCcHHHHHHHHHcCCccc
Q 018072 327 KPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~~ 346 (361)
.+.++++++++.++++..
T Consensus 296 --~~~~~~~~~~~~~~~l~~ 313 (347)
T cd05278 296 --RARMPELLDLIEEGKIDP 313 (347)
T ss_pred --hhHHHHHHHHHHcCCCCh
Confidence 467899999999998764
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.9e-39 Score=305.49 Aligned_cols=304 Identities=30% Similarity=0.451 Sum_probs=260.9
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++.+++.++.+.+.+.|.+++++++|||.++++|++|+..+.|..+ ...+|.++|||++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 79999998877799999999999999999999999999999998877553 245688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..+...|+.|..|..|..++|.+..+. |+. . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GIG-T------------------DGGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Ccc-C------------------CCcceeeEEecHHHeEECCCC
Confidence 999999999999999999999999999988766 331 1 248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++++++.+++.+.|||+++.+. ..+.+|++|||+|+|.+|++++|+|+.+|..+|+++++++++.+.++++|++++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 99999999999999999997665 46889999999999889999999999999338999999999999999999998887
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~ 324 (361)
+... +.+.++.++.+ ++|+++|++|++.....++++|+++ |+++.+|.... .+++... +.+++++.++...
T Consensus 219 ~~~~---~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 219 ASDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred CCcc---HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc
Confidence 6553 66677777766 8999999999877889999999998 99999997652 2233333 3489999887644
Q ss_pred CCCcCCcHHHHHHHHHcCCccc
Q 018072 325 NYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
. .+.+.+++++++++.+.+
T Consensus 292 ~---~~~~~~~~~~l~~g~l~~ 310 (340)
T cd05284 292 T---RAELVEVVALAESGKVKV 310 (340)
T ss_pred c---HHHHHHHHHHHHhCCCCc
Confidence 3 467899999999998753
No 41
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=3.5e-39 Score=306.36 Aligned_cols=307 Identities=28% Similarity=0.426 Sum_probs=260.9
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC------------CCCCCcccccceeEEEEE
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ------------TPLFPRIFGHEAAGVVES 78 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~ 78 (361)
|||+++..++.+++++++|.|++.++||+|||.++++|++|+..+.+..+ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 79999998888799999999999999999999999999999998877543 123567899999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec
Q 018072 79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 158 (361)
Q Consensus 79 ~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~ 158 (361)
+|++++++++||+|+..+...|+.|..|.++++++|.+.... |. ...|+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---GI-------------------FQDGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---ee-------------------eccCcceeeEEecH
Confidence 999999999999999999999999999999999999764332 21 11258999999999
Q ss_pred cceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072 159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 159 ~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~ 238 (361)
+.++++|+++++.+++.+.+++.|||+++.+...++++++|+|+|+|++|++++|+|+.+|+++|+++++++++++.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998766667789999999889999999999999999789999999999999999
Q ss_pred cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEE
Q 018072 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 318 (361)
Q Consensus 239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l 318 (361)
+|++.+++....+ +.+.+..+..+++|++||++|.+..+..++++|+++ |+++.+|........+.... .++++++
T Consensus 219 ~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i 294 (350)
T cd08240 219 AGADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTI 294 (350)
T ss_pred hCCcEEecCCCcc--HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEE
Confidence 9998888765544 666676665558999999999778899999999998 99999987664433443322 3388899
Q ss_pred EEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 319 KGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 319 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.+++... .+++.+++++++++.++.
T Consensus 295 ~~~~~~~---~~~~~~~~~ll~~~~i~~ 319 (350)
T cd08240 295 QGSYVGS---LEELRELVALAKAGKLKP 319 (350)
T ss_pred EEcccCC---HHHHHHHHHHHHcCCCcc
Confidence 8877554 367889999999998753
No 42
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=5.4e-39 Score=308.93 Aligned_cols=322 Identities=28% Similarity=0.381 Sum_probs=259.8
Q ss_pred eeEEEeecCCCCeEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++.++++ ++++++|.|.|. +++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 79999998866 999999999984 9999999999999999999998876656678999999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCC----cccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEE
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINP----VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAK 163 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~----~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~ 163 (361)
|+|++.+..+|++|.+|+.+..+.|.+..... .+|.. ..|..+++ ... ....|+|+||++++.+ .+++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~-~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA-GAGIFGYS----HLT-GGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccc-cccccccc----ccc-CCCCCeeEEEEEcccccCeEEE
Confidence 99999999999999999999999998754321 11111 00000000 000 0113689999999988 8999
Q ss_pred CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072 164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (361)
Q Consensus 164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~ 243 (361)
+|+++++++++.++.++.|||+++ +..++.+|++|+|+|+|++|++++++|++.|..+|+++++++++.+.+++++...
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 232 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence 999999999999999999999997 7788999999999988999999999999999867999999999999999984446
Q ss_pred EEcCCCCCccHHHHHHHHcCC-CccEEEEccCC---------------------hHHHHHHHHHhcCCCcEEEEEcCCCC
Q 018072 244 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN---------------------IDNMISAFECVHDGWGVAVLVGVPSK 301 (361)
Q Consensus 244 vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~g~~~~ 301 (361)
++++...+ ++.+.+..++++ ++|++||++|+ ...+..++++++++ |+++.+|....
T Consensus 233 vi~~~~~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~ 310 (386)
T cd08283 233 TINFEEVD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGG 310 (386)
T ss_pred EEcCCcch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCC
Confidence 67665532 267778777776 89999999975 24678899999998 99999997653
Q ss_pred CceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 302 DAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 302 ~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
. ...++... +.+++++.++... ..+.++++++++++++++.
T Consensus 311 ~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~ 352 (386)
T cd08283 311 T-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDP 352 (386)
T ss_pred C-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCCh
Confidence 2 23334322 3388998887532 2467889999999888764
No 43
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.7e-39 Score=303.19 Aligned_cols=273 Identities=18% Similarity=0.256 Sum_probs=216.8
Q ss_pred ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecC-ccchhccccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018072 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLC-RTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
+|||+++.+++. +++++.|.|+|+++||+|||.++||| ++|++++.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 589999998886 99999999999999999999999996 6999988886543 2579999999999999999998 6
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
|++||||++. |..|..|.. | . .|+|+||+++|++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~---~------------------~G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G---L------------------FGGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c---c------------------CCcccceEEcCHHHceeCC
Confidence 9999999873 223333210 1 0 1489999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
++++++. +.++ ++.|||+++.+ . ..++++|+|+|+|++|++++|+|+++|+..|++++.+++|++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9998864 5554 57899998644 3 34689999999999999999999999996688888888888777653 334
Q ss_pred cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 325 (361)
++.+. .+.++|+|||++|++..++.++++++++ |+++++|.......+++. ..++|++++.++..+.
T Consensus 192 ~~~~~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~~~~~~~ 258 (308)
T TIGR01202 192 DPEKD-----------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFV-PAFMKEARLRIAAEWQ 258 (308)
T ss_pred Chhhc-----------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccc-hhhhcceEEEEecccc
Confidence 33210 1237999999999988899999999998 999999986533333332 2234899998876443
Q ss_pred CCcCCcHHHHHHHHHcCCcccC
Q 018072 326 YKPRTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~~ 347 (361)
+++++++++++++++++++
T Consensus 259 ---~~~~~~~~~l~~~g~i~~~ 277 (308)
T TIGR01202 259 ---PGDLHAVRELIESGALSLD 277 (308)
T ss_pred ---hhHHHHHHHHHHcCCCChh
Confidence 4689999999999998653
No 44
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=6.1e-39 Score=309.42 Aligned_cols=312 Identities=19% Similarity=0.224 Sum_probs=255.7
Q ss_pred ccccceeEEEeec--CCC---CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC----------CCCCccccc
Q 018072 6 GLILTCKAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----------PLFPRIFGH 70 (361)
Q Consensus 6 ~~~~~m~a~~~~~--~~~---~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----------~~~p~~~G~ 70 (361)
.+|.+|+|+++.. .+. .++++++|.|.++++||+|||.++++|++|++.+.+.... ...+.++||
T Consensus 8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~ 87 (393)
T cd08246 8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS 87 (393)
T ss_pred cCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence 4789999999863 232 2789999999999999999999999999999887664110 112358999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccc
Q 018072 71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF 150 (361)
Q Consensus 71 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ 150 (361)
|++|+|+++|++++.+++||+|++.+...|+.|..|..+..++|....+. |+.. ..|+|
T Consensus 88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~~------------------~~g~~ 146 (393)
T cd08246 88 DASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW---GYET------------------NYGSF 146 (393)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc---cccC------------------CCCcc
Confidence 99999999999999999999999999999999999999999999865444 3211 12589
Q ss_pred eeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhh--cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072 151 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD 227 (361)
Q Consensus 151 ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~--~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~ 227 (361)
+||+.++.+.++++|+++++++++.+++++.|||+++... +++++|++|+|+|+ |++|++++++|+++|+ ++++++
T Consensus 147 a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~ 225 (393)
T cd08246 147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVV 225 (393)
T ss_pred eeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEe
Confidence 9999999999999999999999999999999999997554 68899999999997 9999999999999999 777888
Q ss_pred CChhhHHHHHHcCCCEEEcCCCCC--------------------ccHHHHHHHHcCC--CccEEEEccCChHHHHHHHHH
Q 018072 228 RSSKRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFEC 285 (361)
Q Consensus 228 ~~~~~~~~~~~~G~~~vv~~~~~~--------------------~~~~~~i~~~~~~--g~Dvvid~~g~~~~~~~~~~~ 285 (361)
++++++++++++|++.++++...+ ..+.+.+.+++++ ++|++||++|+ ..+..++++
T Consensus 226 ~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~ 304 (393)
T cd08246 226 SSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFV 304 (393)
T ss_pred CCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHH
Confidence 999999999999999998864321 0245667777765 79999999998 778999999
Q ss_pred hcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072 286 VHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 286 l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~ 345 (361)
++++ |+++.+|..... ...++... +.++.++.|++.+. .+++.+++++++++.+.
T Consensus 305 l~~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~ 360 (393)
T cd08246 305 CDRG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRID 360 (393)
T ss_pred hccC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCce
Confidence 9998 999999875422 12222232 34888898887554 35788999999998875
No 45
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.3e-38 Score=301.92 Aligned_cols=305 Identities=30% Similarity=0.396 Sum_probs=258.6
Q ss_pred eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++.+++. +++++.|.|+| .++||+|||+++++|++|+.++.|..+...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 78999999887 99999999996 89999999999999999999988866555568899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~ 167 (361)
|+|++.+...|++|.+|..++++.|....+. .| + ...|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~----------~~~g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LG---------N----------LIDGTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cc---------c----------ccCCeeeeEEEcccccCceEECCCC
Confidence 9999999999999999999999999754321 01 0 112489999999987 89999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
++..+++.++.++.+||+++....++.+|++|+|.|+|.+|++++|+|+.+|..+|+++++++++.+.++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999977778889999999999889999999999999994489999999999999999999999987
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN 325 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~ 325 (361)
...+ +.+.+..++.+ ++|++||++|....++.+++.|+++ |+++.+|..... ..+++..++ +++++.+....
T Consensus 219 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc-
Confidence 7654 66677777665 8999999999878899999999998 999999975432 334444434 89999875432
Q ss_pred CCcCCcHHHHHHHHHcCCccc
Q 018072 326 YKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.+.+++++++++++.++.
T Consensus 293 ---~~~~~~~~~~~~~~~l~~ 310 (345)
T cd08286 293 ---TNTTPMLLKLVSSGKLDP 310 (345)
T ss_pred ---hhhHHHHHHHHHcCCCCh
Confidence 256888889998887753
No 46
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.7e-38 Score=300.92 Aligned_cols=307 Identities=29% Similarity=0.435 Sum_probs=262.5
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+++.++++++.|.|.+.++||+||+.++++|++|+..+.|..+...+|.++|+|++|+|+++|+++..+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998887799999999999999999999999999999998888665556688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCCC
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA 168 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~~ 168 (361)
+|+..+..+|++|.+|..|..+.|.+.... |.. ..|+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQP---GFT-------------------HPGSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCccc---ccC-------------------CCCcceeEEEcccccCceEECCCCC
Confidence 999888889999999999999999975322 111 12489999999975 899999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
+.++++.++.++.|||+++.+..++.++++|+|+|+|++|++++|+|+..|. +|+++.+++++.+.++++|++.++++.
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999998999999998778889999999999999999999999999999 899999999999999999999999876
Q ss_pred C-CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce-eecChhhh-ccccEEEEeeecC
Q 018072 249 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTFFGN 325 (361)
Q Consensus 249 ~-~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~-~~~~~l~g~~~~~ 325 (361)
. .+ +.+.+..+..+++|++||++|+...+..++++++++ |+++.+|....... ..++...+ .+++++.++....
T Consensus 218 ~~~~--~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (345)
T cd08260 218 EVED--VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP 294 (345)
T ss_pred cchh--HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC
Confidence 5 33 666677666558999999999767889999999998 99999997653322 33443334 4888988876432
Q ss_pred CCcCCcHHHHHHHHHcCCccc
Q 018072 326 YKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.+.+++++++++++++..
T Consensus 295 ---~~~~~~~~~l~~~~~i~~ 312 (345)
T cd08260 295 ---AHRYDAMLALIASGKLDP 312 (345)
T ss_pred ---HHHHHHHHHHHHcCCCCh
Confidence 468899999999888754
No 47
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.8e-38 Score=303.19 Aligned_cols=306 Identities=26% Similarity=0.393 Sum_probs=247.3
Q ss_pred cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 018072 9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
..|+++++..+.. +++++.+.|.|.++||+|||+++++|++|+..+.+... ...+|.++|||++|+|+++|++++.
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 4466666667765 89999999999999999999999999999998765321 1235789999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
|++||+|++.+..+|+.|..|..|.++.|.+..+. +.. +..|+|+||++++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~------------------~~~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF---ATP------------------PVHGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc---CCC------------------CCCCcccceEEcchHHeEECC
Confidence 99999999999999999999999999999864322 111 012489999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
++++++++++.. ++.++|+++ +..++.+|++|+|+|+|++|++++|+|+++|+..|++++++++|.++++++|++.++
T Consensus 154 ~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 999998887632 455688875 778899999999999899999999999999997789999999999999999999887
Q ss_pred cCCCCCccHHHHHHHH---cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEe
Q 018072 246 NTSEHDRPIQEVIAEM---TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGT 321 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~ 321 (361)
++...+.++.+.+..+ ..+++|++||++|++..+..++++++++ |+++.+|..... ..+.... .++++++.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~ 308 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGV 308 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEe
Confidence 7643222366666544 2348999999999778899999999998 999999965422 2222323 3488999887
Q ss_pred eecCCCcCCcHHHHHHHHHcCCcc
Q 018072 322 FFGNYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~l~ 345 (361)
+.. ...++.+++++++++++
T Consensus 309 ~~~----~~~~~~~~~~~~~~~l~ 328 (364)
T PLN02702 309 FRY----RNTWPLCLEFLRSGKID 328 (364)
T ss_pred ccC----hHHHHHHHHHHHcCCCC
Confidence 642 25788899999998875
No 48
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.4e-39 Score=298.23 Aligned_cols=256 Identities=28% Similarity=0.429 Sum_probs=211.1
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCc
Q 018072 67 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 140 (361)
Q Consensus 67 ~~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~ 140 (361)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|++|+.++++.|.+.... |.....+ ++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~--~~------ 69 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS--GW------ 69 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC--Cc------
Confidence 589999999999999999 899999999999999999999999999999886544 3210000 00
Q ss_pred cccccCcccceeeEEEecc-ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC
Q 018072 141 VNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG 219 (361)
Q Consensus 141 ~~~~~~~G~~ae~v~v~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g 219 (361)
...|+|+||+++|++ .++++|+++++++++.+++++.|+|+++ +.....+|++|||+|+|++|++++|+|+++|
T Consensus 70 ----~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 70 ----PLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred ----cccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 112589999999997 7999999999999999998999999986 4456679999999999999999999999999
Q ss_pred CCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 220 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 220 ~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+.+|++++++++|+++++++|++.+++... ..+.+..++.+ ++|++||++|++..+..++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966999999999999999999998887643 33455666665 8999999999988899999999998 99999997
Q ss_pred CCCCceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcC--Cccc
Q 018072 299 PSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNK--VIRF 346 (361)
Q Consensus 299 ~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--~l~~ 346 (361)
........+++..++ |++++.|+..+. +++++++++++.++ ++++
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~ 267 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPF 267 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCH
Confidence 643233444455444 999999987543 46899999999974 4544
No 49
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=3.8e-38 Score=301.22 Aligned_cols=328 Identities=32% Similarity=0.518 Sum_probs=263.6
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD---LE 87 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~---~~ 87 (361)
|||+++.+++.++.+++.|.|.++++||+|||.++++|++|+.++.+..+. .+|.++|||++|+|+++|+++.. |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 789999998777899999999999999999999999999999988775543 56889999999999999999988 99
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCccccc-CCcccccccCCCcccc-cCCCccccccCcccceeeEEEeccceEECC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI-NPVRGVMLADGQSRFS-INGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~-~~~~G~~~~~g~~~~~-~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
+||+|+..+..+|+.|.+|..+..++|.+..+ ++..|.. .+|-..+. -.+.++.. ...|+|++|+.++.+.++++|
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P 157 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL-YDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLP 157 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc-cCCcccccccCCCcccc-ccCCcceeEEEechhhEEECC
Confidence 99999999999999999999999999997542 1111100 11100000 00000000 123689999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
+++++.+++.+++++.|||+++.+...+.++++|+|+|+|++|++++++|+..|+..|++++.++++.+.++++|++.++
T Consensus 158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~ 237 (367)
T cd08263 158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237 (367)
T ss_pred CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEe
Confidence 99999999999999999999987878889999999998899999999999999995599998999999999999999999
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeee
Q 018072 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF 323 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~ 323 (361)
+....+ +.+.++.+.++ ++|++||++++.+.+..++++++++ |+++.+|.........++...+ .+++++.++..
T Consensus 238 ~~~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (367)
T cd08263 238 NAAKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG 314 (367)
T ss_pred cCCccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC
Confidence 877654 77777777655 8999999999955889999999998 9999998765332334444445 38888887542
Q ss_pred cCCCcCCcHHHHHHHHHcCCccc
Q 018072 324 GNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.. ..+.+++++++++++++..
T Consensus 315 ~~--~~~~~~~~~~ll~~~~l~~ 335 (367)
T cd08263 315 AR--PRQDLPELVGLAASGKLDP 335 (367)
T ss_pred CC--cHHHHHHHHHHHHcCCCCc
Confidence 22 2357889999999988754
No 50
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=7.6e-38 Score=291.90 Aligned_cols=300 Identities=27% Similarity=0.456 Sum_probs=250.9
Q ss_pred eeEEEeecCCC-CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++.+++. .+++++++.|++.++||+|||.++++|++|...+.+.......|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 68999987652 49999999999999999999999999999998877755334457899999999999999999999999
Q ss_pred CEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 90 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 90 d~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
|+|+..+. .+|+.|.+|..+..+.|...+.. |. ...|+|++|++++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGI---GT-------------------QADGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCcee---ee-------------------cCCCceEEEEEcchHHeEECcCCC
Confidence 99998774 68999999999999999864322 11 112589999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHHcCCCEEEc
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~--~~~~~~~~~~~~~G~~~vv~ 246 (361)
++++++ +..++.++|+++....+++++++|+|.|+|.+|++++|+|+.+|+ +|+.+ ++++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 566888999998888899999999998889999999999999999 67776 345668888899999877 7
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~ 324 (361)
+...+ +.+.+..+..+ ++|++||++|+...+..++++|+++ |+++.+|... .....++...+ +++++|.|++++
T Consensus 216 ~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCcCC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence 65554 77777777765 8999999998778889999999998 9999999865 22233333334 499999999987
Q ss_pred CCCcCCcHHHHHHHHHcC
Q 018072 325 NYKPRTDLPSVVDMYMNK 342 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~ 342 (361)
+ +++++++++++++|
T Consensus 292 ~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 292 T---PASWETALRLLASG 306 (306)
T ss_pred c---hHhHHHHHHHHhcC
Confidence 6 47899999999875
No 51
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.1e-37 Score=295.07 Aligned_cols=307 Identities=28% Similarity=0.389 Sum_probs=252.3
Q ss_pred eeEEEeecCCCCeEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++..++. +++++++.|.|. ++||+|||.++++|+.|+....|..+ ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 78999988765 999999999985 99999999999999999988877544 3457889999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~ 167 (361)
|+|+..+..+|+.|.+|.+++.+.|.+.... |.. + .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLF---GYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCccc---ccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 9999999999999999999999999764222 110 0 00113589999999865 99999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
+++++++.++.++.|||+++. ...+.+|++|+|+|+|.+|++++|+|+.+|..+|+++++++++.++++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999974 47889999999998899999999999999975799998899999999999985 4555
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN 325 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~ 325 (361)
...+ +.+.+..++++ ++|++||+++++..+..++++++++ |+++.+|..... ........ +.+++++.+..
T Consensus 219 ~~~~--~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--- 291 (344)
T cd08284 219 EDAE--PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR--- 291 (344)
T ss_pred CCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---
Confidence 4433 77778777765 8999999999878899999999998 999999976522 22222333 34888887553
Q ss_pred CCcCCcHHHHHHHHHcCCccc
Q 018072 326 YKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~ 346 (361)
....+.++++++++.++++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~ 312 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDL 312 (344)
T ss_pred CCcchhHHHHHHHHHcCCCCh
Confidence 223578999999999988753
No 52
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=8.3e-38 Score=301.96 Aligned_cols=311 Identities=20% Similarity=0.248 Sum_probs=252.6
Q ss_pred cccceeEEEeec--CCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC----------CCCCC-ccccc
Q 018072 7 LILTCKAAVAWE--AGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFP-RIFGH 70 (361)
Q Consensus 7 ~~~~m~a~~~~~--~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G~ 70 (361)
+|.+|||+++.. .+++ +++++.|.|.|.++|++||++++++|++|++...+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 578899999964 4543 89999999999999999999999999999876544210 01223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccc
Q 018072 71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF 150 (361)
Q Consensus 71 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ 150 (361)
|++|+|+++|++++.+++||+|++.+...|++|.+|+.++.+.|....+. |.. ...|+|
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~------------------~~~g~~ 142 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW---GYE------------------TNFGSF 142 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc---ccc------------------CCCccc
Confidence 99999999999999999999999999999999999999999999764332 211 113589
Q ss_pred eeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhh--hcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072 151 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD 227 (361)
Q Consensus 151 ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~ 227 (361)
+||++++.+.++++|+++++++++.+.+++.|||+++.. ..++++|++|+|+|+ |++|++++|+|+++|+ ++++++
T Consensus 143 ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~ 221 (398)
T TIGR01751 143 AEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVV 221 (398)
T ss_pred eEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEc
Confidence 999999999999999999999999999999999998754 477899999999998 9999999999999999 778888
Q ss_pred CChhhHHHHHHcCCCEEEcCCCCC--------------------ccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHh
Q 018072 228 RSSKRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECV 286 (361)
Q Consensus 228 ~~~~~~~~~~~~G~~~vv~~~~~~--------------------~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l 286 (361)
+++++.+.++++|++.++++++.+ ..+.+.+.+++++ ++|++||++|. ..+..+++++
T Consensus 222 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l 300 (398)
T TIGR01751 222 SSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVC 300 (398)
T ss_pred CCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhh
Confidence 889999999999999999875421 1244566667765 89999999997 7788999999
Q ss_pred cCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072 287 HDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 287 ~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~ 345 (361)
+++ |+++.+|..... ...++... +.++.++.++..+.. .++++++++++++++.
T Consensus 301 ~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~ 355 (398)
T TIGR01751 301 RRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRID 355 (398)
T ss_pred ccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCcc
Confidence 998 999999976532 12222332 347888888765543 4578888999888775
No 53
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.4e-37 Score=298.18 Aligned_cols=314 Identities=26% Similarity=0.362 Sum_probs=250.9
Q ss_pred eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
||++++.+++. ++++++|+|.+ .++|++|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 68999988875 99999999996 799999999999999999999887655 4568899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~ 167 (361)
|+|+..+..+|+.|..|..++.+.|.+..+. .++ ..|... ......|+|+||+++|.+ .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-------~~~-~~~~~~----~~~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-------RAG-GAYGYV----DMGPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-------ccc-cccccc----ccCCCCCeeeeEEEeecccCcEEECCCC
Confidence 9999999999999999999999999763222 000 000000 001113589999999976 89999999
Q ss_pred CChh---hhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072 168 APLD---KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (361)
Q Consensus 168 ~~~~---~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v 244 (361)
++++ +++.+..++.|||+++ ..+++++|++|+|.|+|++|++++|+|+++|+.+|++++++++|+++++++|+ ..
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence 9998 5677888899999997 78899999999999889999999999999998678889999999999999998 45
Q ss_pred EcCCCCCccHHHHHHHHcCCCccEEEEccCChH-----------HHHHHHHHhcCCCcEEEEEcCCCCCc----------
Q 018072 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID-----------NMISAFECVHDGWGVAVLVGVPSKDA---------- 303 (361)
Q Consensus 245 v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~~~---------- 303 (361)
+++.+.+ +.+.+..++++++|+++|++|++. .+..++++++++ |+++.+|......
T Consensus 225 v~~~~~~--~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~ 301 (375)
T cd08282 225 IDFSDGD--PVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQ 301 (375)
T ss_pred eccCccc--HHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccC
Confidence 5555433 667777776667999999999852 488999999998 9999888653210
Q ss_pred -eeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 304 -VFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 304 -~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
...++...+. ++..+.+.... .++.++.++++++++++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~ 343 (375)
T cd08282 302 GELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKP 343 (375)
T ss_pred ccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCCh
Confidence 1222333333 67777765432 2467889999999998864
No 54
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.1e-37 Score=294.60 Aligned_cols=303 Identities=25% Similarity=0.395 Sum_probs=250.1
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.++++...+++.|.|.|.++||+|||+++++|++|+..+.+..+. ..|.++|||++|+|+++|+++..|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 899999998874338999999999999999999999999999888775432 3477899999999999999999999999
Q ss_pred EEeecC-CCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 91 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 91 ~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
+|++.+ ..+|+.|..|..+..+.|.+.... |.. ..|+|+||+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNA---GYT-------------------VDGGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCcccc---Ccc-------------------ccCcceeEEEEchHHeEeCCCCCC
Confidence 998654 458999999999999999876533 221 124899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
+.+++.++.++.|||+++ ..+.+++|++|||+|+|++|++++|+|+.. |+ +|+++++++++++.++++|++.++++.
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999996 778899999999999999999999999984 98 899999999999999999999988875
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 328 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 328 (361)
..+ ++.+.++...+ ++|+++++.++...++.++++++++ |+++.+|.......++.. ....++.++.+++.+.
T Consensus 216 ~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~--- 288 (338)
T PRK09422 216 RVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESMDLSIP-RLVLDGIEVVGSLVGT--- 288 (338)
T ss_pred ccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCceecHH-HHhhcCcEEEEecCCC---
Confidence 422 25666776665 6885555555668899999999998 999999875433232221 2233788888766433
Q ss_pred CCcHHHHHHHHHcCCcc
Q 018072 329 RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~ 345 (361)
+++++++++++++++++
T Consensus 289 ~~~~~~~~~l~~~g~l~ 305 (338)
T PRK09422 289 RQDLEEAFQFGAEGKVV 305 (338)
T ss_pred HHHHHHHHHHHHhCCCC
Confidence 46789999999998874
No 55
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.7e-37 Score=293.70 Aligned_cols=301 Identities=28% Similarity=0.413 Sum_probs=247.8
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
||++++.++++.+++.+.|.|.|.++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 7899999988779999999999999999999999999999998766531 1234678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..++++|+.|..|+.++.++|.+..+. | ....|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV---G-------------------VNRPGAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCccee---e-------------------ecCCCcceeeEEechHHeEECcCC
Confidence 999999999999999999999999999764322 1 111248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
+++++++.+ .++.++++++.. ...+|++|+|.|+|.+|++++|+|+.+|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888755 466677665433 34689999999889999999999999998678888889999999999999999887
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 326 (361)
...+ +.+.++.++.+ ++|++||++|+...+..++++++++ |+++.+|.......+.+ ....++++++.++.....
T Consensus 216 ~~~~--~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~ 291 (341)
T PRK05396 216 AKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGREM 291 (341)
T ss_pred cccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccCc
Confidence 7655 77788877765 8999999999878899999999998 99999997653333332 233348888888753222
Q ss_pred CcCCcHHHHHHHHHcC
Q 018072 327 KPRTDLPSVVDMYMNK 342 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~ 342 (361)
.+.+..+++++.++
T Consensus 292 --~~~~~~~~~~~~~~ 305 (341)
T PRK05396 292 --FETWYKMSALLQSG 305 (341)
T ss_pred --cchHHHHHHHHHcC
Confidence 34566778888877
No 56
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.9e-37 Score=293.70 Aligned_cols=303 Identities=29% Similarity=0.401 Sum_probs=251.7
Q ss_pred eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++.++++ +++++.|.|.| +++||+||+.++++|++|+..+.|..+ ...|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccCCC
Confidence 78999998886 99999999996 899999999999999999988877554 3457899999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 167 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~ 167 (361)
|+|++.+..+|+.|..|..++.++|.+..+. |.. ..|+|+||+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW---GAF-------------------VDGGQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCcc---cCC-------------------CCCceEEEEEcchhhCceEECCCC
Confidence 9999877788999999999999999865433 211 12489999999975 99999999
Q ss_pred CChhhhh-----ccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072 168 APLDKVC-----ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (361)
Q Consensus 168 ~~~~~aa-----~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~ 242 (361)
++++.+. .+...+.+||+++ +.+.+++|++|+|.|+|++|++++|+|+++|++.++++++++++.+.++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 1225678899986 578899999999998899999999999999996699999999999999999999
Q ss_pred EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhccccEEEE
Q 018072 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKG 320 (361)
Q Consensus 243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~l~g 320 (361)
.++++...+ +.+.+..++++ ++|+++|++|++..+..++++++++ |+++.+|.... ...++. ..+.+++++.+
T Consensus 216 ~v~~~~~~~--~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERGEE--AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence 999887654 77778777766 8999999999878999999999998 99999987653 233444 33448999987
Q ss_pred eeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 321 TFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
..... .+.++++++++.+++++.
T Consensus 291 ~~~~~---~~~~~~~~~~~~~~~l~~ 313 (345)
T cd08287 291 GPAPV---RRYLPELLDDVLAGRINP 313 (345)
T ss_pred ecCCc---HHHHHHHHHHHHcCCCCH
Confidence 54322 467899999999998753
No 57
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.8e-37 Score=290.84 Aligned_cols=301 Identities=33% Similarity=0.528 Sum_probs=255.1
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+++. +.+.++|.|.++++|++|||.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 78999998876 99999999999999999999999999999998877655555688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|+..+..+|+.|+.|+.++.+.|.+.... +.. +.|+|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQVL---GVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCee---eec-------------------CCCcceeEEEechh-eEECCCCCCH
Confidence 999999999999999999999999543221 111 12489999999999 9999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
++++++ ..+.++++++ +...+.+|++|||+|+|.+|++++|+|+.+|. +|+++.+++++.++++++|+++++++...
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~ 213 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDE 213 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCccc
Confidence 999877 4778888876 77889999999999889999999999999998 89999899999999999999999988765
Q ss_pred CccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc
Q 018072 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP 328 (361)
Q Consensus 251 ~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~ 328 (361)
+ +.+.+..++++ ++|++||++|+...+..++++|+++ |+++.+|..... ..++...+. +++++.++.. ..
T Consensus 214 ~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~~---~~ 285 (337)
T cd08261 214 D--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSRN---AT 285 (337)
T ss_pred C--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEecc---CC
Confidence 5 77788877766 8999999998878889999999998 999999876522 233333344 7888877632 23
Q ss_pred CCcHHHHHHHHHcCCccc
Q 018072 329 RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~~ 346 (361)
.+.+++++++++++.++.
T Consensus 286 ~~~~~~~~~l~~~~~i~~ 303 (337)
T cd08261 286 REDFPDVIDLLESGKVDP 303 (337)
T ss_pred hhhHHHHHHHHHcCCCCh
Confidence 467889999999998754
No 58
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.2e-37 Score=296.50 Aligned_cols=307 Identities=28% Similarity=0.398 Sum_probs=248.6
Q ss_pred ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC------C-CCCCCcccccceeEEEEEeCCC
Q 018072 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEG 82 (361)
Q Consensus 10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~~G~~ 82 (361)
++.+.++..+ . ++++++|.|+++++||+|||.++++|++|+..+.+.. + ..++|.++|||++|+|+++|++
T Consensus 28 ~~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 105 (384)
T cd08265 28 NLGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKN 105 (384)
T ss_pred cceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCC
Confidence 4555555543 3 9999999999999999999999999999998876321 1 1346889999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA 162 (361)
Q Consensus 83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~ 162 (361)
++.|++||+|++.+..+|+.|+.|..+..++|.+.... |+. ..|+|++|+.++.+.++
T Consensus 106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~v~v~~~~~~ 163 (384)
T cd08265 106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKEL---GFS-------------------ADGAFAEYIAVNARYAW 163 (384)
T ss_pred CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCccee---eec-------------------CCCcceeeEEechHHeE
Confidence 99999999999999999999999999999999875533 221 12489999999999999
Q ss_pred ECCCCC-------Chhhhhccccchhhhhhhhhhh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072 163 KINPLA-------PLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 234 (361)
Q Consensus 163 ~iP~~~-------~~~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~ 234 (361)
++|+++ +.+ ++++..++.+||+++... .++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|.+
T Consensus 164 ~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~ 242 (384)
T cd08265 164 EINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN 242 (384)
T ss_pred ECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 999864 444 555666889999997665 68999999999988999999999999999877999999999999
Q ss_pred HHHHcCCCEEEcCCCC-CccHHHHHHHHcCC-CccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh
Q 018072 235 EAKKFGVTDFVNTSEH-DRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 311 (361)
Q Consensus 235 ~~~~~G~~~vv~~~~~-~~~~~~~i~~~~~~-g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~ 311 (361)
+++++|+++++++.+. +.++.+.+..++++ ++|+|+|++|++ ..++.++++|+++ |+++.+|..... ..+.+..
T Consensus 243 ~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~ 319 (384)
T cd08265 243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEV 319 (384)
T ss_pred HHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHH
Confidence 9999999998887643 12377778888876 899999999973 4788999999998 999999965432 2333333
Q ss_pred h-ccccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 312 V-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 312 ~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
+ ++..++.++.... ....+.+++++++++.++.
T Consensus 320 ~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~ 353 (384)
T cd08265 320 LQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDM 353 (384)
T ss_pred HhhCceEEEEeeccC--CcchHHHHHHHHHcCCCCh
Confidence 3 3777888775322 2357899999999998864
No 59
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-37 Score=293.00 Aligned_cols=299 Identities=24% Similarity=0.384 Sum_probs=251.4
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.++++++++++.|.|.+.++|++||++++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 78999999998899999999999999999999999999999988877655556688999999999999999998899999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|++.+..+|+.|++|..+.++.|.+..+. |.. ..|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY---GEE-------------------LDGFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc---ccc-------------------cCceeeeeeecchhceEECCCCCCH
Confidence 999998899999999999999999875433 211 1248999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
.+++.+++++.+||+++.+. .++++++|+|+|+ |.+|++++|+|+..|+ +|+++++++++.+.++++ ++.+++..
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987554 8999999999998 9999999999999999 899999999999999888 66666554
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hhccccEEEEeeecCCCc
Q 018072 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP 328 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~ 328 (361)
+ +.+.++.+ +++|+++|++|+ ..+..++++++++ |+++.+|.......++.... .+.+++++.++... .
T Consensus 215 -~--~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 284 (334)
T PRK13771 215 -K--FSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA---T 284 (334)
T ss_pred -h--HHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---C
Confidence 2 55555554 379999999998 5788999999998 99999997653222122222 23488898887532 3
Q ss_pred CCcHHHHHHHHHcCCcc
Q 018072 329 RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~ 345 (361)
++++++++++++++.++
T Consensus 285 ~~~~~~~~~~~~~~~l~ 301 (334)
T PRK13771 285 KRDVEEALKLVAEGKIK 301 (334)
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 56789999999998874
No 60
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=5.8e-37 Score=289.11 Aligned_cols=304 Identities=28% Similarity=0.448 Sum_probs=257.8
Q ss_pred eeEEEeecCCCC-eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 11 CKAAVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 11 m~a~~~~~~~~~-~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
||++++..++++ +.+.+.|.|.+.+++|+|||.++++|+.|.....+..+ ..++|.++|+|++|+|+++|+++..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999987 68888899999999999999999999999998877654 3456789999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|+..|..+|+.|..|..++.+.|...... |.. ..|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP---GLG-------------------IDGGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc---ccc-------------------cCCcceeeEEechHHeEECCCCC
Confidence 99999999999999999999999999654333 211 12489999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
++.+++.++.++.|||+++.+...++++++|||.|+|.+|++++++|+..|. +|+++++++++.+.++++|++.+++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998777889999999999889999999999999998 799999999999999999998888766
Q ss_pred CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCC
Q 018072 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY 326 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~ 326 (361)
... ..+.+ ....+ ++|+++|++|....++.++++|+++ |+++.+|.......++ ...++ ++.++.+++...
T Consensus 218 ~~~--~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~- 290 (338)
T cd08254 218 DDS--PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVD--LSDLIARELRIIGSFGGT- 290 (338)
T ss_pred CcC--HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccC--HHHHhhCccEEEEeccCC-
Confidence 544 55555 44444 8999999999878899999999998 9999998755333333 33333 888888876332
Q ss_pred CcCCcHHHHHHHHHcCCccc
Q 018072 327 KPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~~ 346 (361)
.+.++.++++++++.+..
T Consensus 291 --~~~~~~~~~ll~~~~l~~ 308 (338)
T cd08254 291 --PEDLPEVLDLIAKGKLDP 308 (338)
T ss_pred --HHHHHHHHHHHHcCCCcc
Confidence 468889999999998864
No 61
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=9.1e-37 Score=288.81 Aligned_cols=304 Identities=29% Similarity=0.443 Sum_probs=256.2
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+++. +.+++.+.|++.+++|+|||.++++|+.|+.++.+.......|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999998886 99999999999999999999999999999998877553344577999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccc-----eEECC
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-----VAKIN 165 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~-----~~~iP 165 (361)
+|+..++.+|++|+.|..++.+.|....+. |. ...|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GN-------------------LYDGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee---cc-------------------CCCCcceeeEEecccccccccEEECC
Confidence 999999999999999999999999875443 21 1135899999999998 99999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
+++++.+++.+ .++.+||+++. ..++++|++|+|+|+|.+|++++|+|+..|.+.|+++++++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999998877 68899999874 45899999999998899999999999999994499999999999999999999988
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeee
Q 018072 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFF 323 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~ 323 (361)
++.+.+ +.+.+..+.++ ++|++||++++...+..++++++++ |+++.+|.........++...+. +++++.++..
T Consensus 216 ~~~~~~--~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCccC--HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 877655 77777777766 8999999999867889999999998 99999986553323333333333 8888877653
Q ss_pred cCCCcCCcHHHHHHHHHcCCcc
Q 018072 324 GNYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~l~ 345 (361)
.. .+.+++++++++++++.
T Consensus 293 ~~---~~~~~~~~~l~~~~~l~ 311 (343)
T cd08235 293 AS---PEDYKEALELIASGKID 311 (343)
T ss_pred CC---hhhHHHHHHHHHcCCCC
Confidence 32 46788999999998874
No 62
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=3.3e-37 Score=291.39 Aligned_cols=305 Identities=25% Similarity=0.403 Sum_probs=252.1
Q ss_pred eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (361)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~ 91 (361)
|+++.+..+..+++++++.|+|.++|++|||+++++|++|+..+.+......+|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57888888777999999999999999999999999999999988876655567889999999999999999999999999
Q ss_pred Ee-ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 92 VL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 92 V~-~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
|+ ......|++|.+|+++..++|....+... |.. .. .....|+|+||+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN-GKY---------PD-----GTITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhccc-ccc---------cC-----CCcCCCcceeEEEechhheEECCCCCCH
Confidence 97 44556899999999999999987543310 000 00 0112358999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
++++.+.+.+.+||+++ ....+++|++++|.|+|++|++++++|+.+|. +|++++++++++++++++|++.+++....
T Consensus 146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~ 223 (337)
T cd05283 146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP 223 (337)
T ss_pred HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcch
Confidence 99999999999999986 44568999999998889999999999999999 89999999999999999999988876543
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR 329 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~ 329 (361)
+ +.+ . ..+++|++||++|....+..++++++++ |+++.+|...... .+++..++ +++++.+++.+. .
T Consensus 224 ~--~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 224 E--AMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred h--hhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence 2 211 1 2348999999999865689999999998 9999999765332 33444434 999999987654 4
Q ss_pred CcHHHHHHHHHcCCcc
Q 018072 330 TDLPSVVDMYMNKVIR 345 (361)
Q Consensus 330 ~~~~~~~~~~~~~~l~ 345 (361)
++++++++++++++++
T Consensus 292 ~~~~~~~~~~~~~~l~ 307 (337)
T cd05283 292 KETQEMLDFAAEHGIK 307 (337)
T ss_pred HHHHHHHHHHHhCCCc
Confidence 6889999999988874
No 63
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.1e-37 Score=289.19 Aligned_cols=279 Identities=20% Similarity=0.270 Sum_probs=228.1
Q ss_pred eeEEEeecCCC-----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018072 11 CKAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS 84 (361)
Q Consensus 11 m~a~~~~~~~~-----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~ 84 (361)
|||+++.+++. .++++++|.|.|+++||+|||.++|+|++|+.++.|..+. ..+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 78999998884 3788899999999999999999999999999988876543 45689999999999999999999
Q ss_pred C-CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE
Q 018072 85 D-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 163 (361)
Q Consensus 85 ~-~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~ 163 (361)
+ |++||+|+..+. . .|+|+||+++|.+.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~------------------~g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------S------------------YGTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------C------------------CCcchheeeecHHHeEE
Confidence 6 999999985320 0 14899999999999999
Q ss_pred CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE-c-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072 164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (361)
Q Consensus 164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~-G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~ 241 (361)
+|+++++++++.+++...|||.+ .+.... ++++++|+ | +|++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999888888999754 455555 56666665 4 59999999999999999 89999999999999999999
Q ss_pred CEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEE
Q 018072 242 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLK 319 (361)
Q Consensus 242 ~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~ 319 (361)
++++++...+ +.+.+++++.+ ++|++||++|+ ......+++++++ |+++.+|.........++... +.+++++.
T Consensus 190 ~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSDPD--FLEDLKELIAKLNATIFFDAVGG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCCcc--HHHHHHHHhCCCCCcEEEECCCc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 9999887655 78888888776 89999999998 5567789999998 999999975433221232333 34899999
Q ss_pred EeeecCCC---cCCcHHHHHHHHHcCCcc
Q 018072 320 GTFFGNYK---PRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 320 g~~~~~~~---~~~~~~~~~~~~~~~~l~ 345 (361)
+++.+.+. .++++++++++++ ++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 293 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK-TELK 293 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh-Cccc
Confidence 98876542 2346778888887 6664
No 64
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.4e-36 Score=287.41 Aligned_cols=294 Identities=22% Similarity=0.310 Sum_probs=238.2
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-----------CCCCCcccccceeEEEEEe
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV 79 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~~ 79 (361)
|||+++..+ ++++++++.|++.++||+|||.++++|+.|+..+.|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 789999876 499999999999999999999999999999998876321 2235789999999999999
Q ss_pred CCCCCC-CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec
Q 018072 80 GEGVSD-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 158 (361)
Q Consensus 80 G~~v~~-~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~ 158 (361)
|+++++ |++||+|+..+...|+.|..|..++.. ...|+|+||+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------------------------~~~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------------------------EAPGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------------------------CCCCceeeeEEech
Confidence 999987 999999999999999999999432111 01248999999999
Q ss_pred cceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072 159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 159 ~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~ 238 (361)
+.++++|+++++++++ ++.++.+||++ ...+++++|++|||+|+|++|.+++|+|+.+|+..++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999998877 55688899998 578899999999999889999999999999999668888899999999999
Q ss_pred cCCCEEEcCCCCCc--cHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccc
Q 018072 239 FGVTDFVNTSEHDR--PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNE 315 (361)
Q Consensus 239 ~G~~~vv~~~~~~~--~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~ 315 (361)
+|+++++++...+. .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|.......+.. ...++++
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~-~~~~~~~ 281 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEP-ALAIRKE 281 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCH-HHHhhcc
Confidence 99988888765421 122 23344444 8999999999855788899999998 99999997643322221 1223477
Q ss_pred cEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072 316 RTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 316 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
+++.++... ..+++.+++++++++++++
T Consensus 282 ~~~~~~~~~---~~~~~~~~~~l~~~g~i~~ 309 (341)
T cd08262 282 LTLQFSLGY---TPEEFADALDALAEGKVDV 309 (341)
T ss_pred eEEEEEecc---cHHHHHHHHHHHHcCCCCh
Confidence 887765432 2457899999999998864
No 65
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.2e-36 Score=288.32 Aligned_cols=303 Identities=28% Similarity=0.462 Sum_probs=247.0
Q ss_pred EEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccC-C-C-CCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-G-Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 13 a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~-~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|+++.++.. +.+++.|.|.|.++||+|||.++++|+.|+..+.+. . . ...+|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467788865 999999999999999999999999999998875321 1 1 12357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|++.+..+|+.|.+|+.|++++|.+..+. +.. ...|+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATP------------------PVDGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccc------------------cCCCceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999864332 100 0124899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
+++++.+ .++.+||+++ +.+.+++|++|+|.|+|.+|++++|+|+.+|++.|+++++++++.++++++|++.++++..
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998877 4788999985 8899999999999988999999999999999955999999999999999999999988766
Q ss_pred CCc-cHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072 250 HDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 327 (361)
Q Consensus 250 ~~~-~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 327 (361)
.+. .+.+.+...+.+ ++|++||++|+...+..++++++++ |+++.+|.......+++. ...++++++.++...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 291 (343)
T cd05285 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY--- 291 (343)
T ss_pred ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC---
Confidence 441 136667776666 8999999999866889999999998 999999865533222221 223488888876532
Q ss_pred cCCcHHHHHHHHHcCCcc
Q 018072 328 PRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~ 345 (361)
.+.+++++++++++++.
T Consensus 292 -~~~~~~~~~~l~~~~l~ 308 (343)
T cd05285 292 -ANTYPTAIELLASGKVD 308 (343)
T ss_pred -hHHHHHHHHHHHcCCCC
Confidence 26788899999888764
No 66
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.8e-36 Score=285.52 Aligned_cols=304 Identities=31% Similarity=0.421 Sum_probs=247.1
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++..++..+.+.+.+.|.|.++|++|||+++++|+.|+.++.+.. ....+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 7899999888669999999999999999999999999999988754421 1234577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..+..+|+.|+.|..++.++|....+. |. ...|+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKIL---GV-------------------DTDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccceE---ec-------------------cCCCcceEEEEechHHcEECcCC
Confidence 999999999999999999999999999754332 21 11358999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
++++.+ ++..++.++++++. ...++|++|+|.|+|.+|++++|+|+..|..+|++++++++|.+.++++|++++++.
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998555 55557888888754 455799999999889999999999999998668888889999999999999888876
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 326 (361)
...+ +. .+..+.++ ++|++||++|+...+..++++|+++ |+++.+|........++.....++++++.++.. .
T Consensus 216 ~~~~--~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 289 (341)
T cd05281 216 REED--VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITG--R 289 (341)
T ss_pred cccc--HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEec--C
Confidence 6544 66 67777765 8999999999878889999999998 999999876533233322223447888877652 2
Q ss_pred CcCCcHHHHHHHHHcCCcc
Q 018072 327 KPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 327 ~~~~~~~~~~~~~~~~~l~ 345 (361)
...+.+.++++++.++.+.
T Consensus 290 ~~~~~~~~~~~~l~~~~l~ 308 (341)
T cd05281 290 KMFETWYQVSALLKSGKVD 308 (341)
T ss_pred CcchhHHHHHHHHHcCCCC
Confidence 2235678899999988864
No 67
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.5e-36 Score=284.61 Aligned_cols=305 Identities=31% Similarity=0.479 Sum_probs=257.1
Q ss_pred eeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 11 m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
|||+++.+++ ..+++++++.|.|.++|++|||.++++|++|..++.+..+. ...|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7999998877 23999999999999999999999999999999888775432 345678999999999999999999999
Q ss_pred CCEEeecC-CCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 89 GDHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 89 Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
||+|+..+ ..+|+.|.+|+.++.+.|.+.... |. ...|+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS---GY-------------------TVDGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc---cc-------------------ccCCcceeEEEeccccEEECCCC
Confidence 99998765 568999999999999999875433 21 11248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998655 58999999999998 6799999999999999 8999999999999999999999988
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~ 324 (361)
+...+ +.+.+..++++ ++|+++|+.++...+..++++++++ |+++.+|.... ...+++...++ +++++.+...+
T Consensus 217 ~~~~~--~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKKSD--DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCCcc--HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccC
Confidence 77654 77778777765 8999999888778999999999998 99999997652 22344444333 89999886543
Q ss_pred CCCcCCcHHHHHHHHHcCCccc
Q 018072 325 NYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
. .+++++++++++++++..
T Consensus 293 ~---~~~~~~~~~~~~~~~l~~ 311 (341)
T cd08297 293 T---RQDLQEALEFAARGKVKP 311 (341)
T ss_pred C---HHHHHHHHHHHHcCCCcc
Confidence 3 478899999999988753
No 68
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2e-36 Score=284.35 Aligned_cols=293 Identities=27% Similarity=0.353 Sum_probs=240.6
Q ss_pred eeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+ .....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 7899987766 3488889998889999999999999999999988764 2223457789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|+..+..+|+.|..|..|+++.|.+..+. |.. ..|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGII---GVV-------------------SNGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCcccee---ecc-------------------CCCceeeEEEcCHHHceeCCCCCC
Confidence 9999999999999999999999999875433 211 124899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
+++++.+++++.+||+++. ..++++|++|+|+|+ |++|++++++|+++|+ +|+++.+ .+.++++|++++++..
T Consensus 138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence 9999999999999999864 488999999999998 9999999999999999 7887752 3677789998888754
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK 327 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~ 327 (361)
+ ..+.++.++ +++|+|+|++|+ ..+..++++|+++ |+++.+|... .....++...+. ++.++.++..+.
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGGT-- 281 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCCC--
Confidence 3 344556555 689999999998 6889999999998 9999998752 222333333333 788888876543
Q ss_pred cCCcHHHHHHHHHcCC
Q 018072 328 PRTDLPSVVDMYMNKV 343 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~ 343 (361)
+++++++++++...+
T Consensus 282 -~~~~~~~~~l~~~~~ 296 (325)
T cd08264 282 -RKELLELVKIAKDLK 296 (325)
T ss_pred -HHHHHHHHHHHHcCC
Confidence 467888888886444
No 69
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.6e-36 Score=282.95 Aligned_cols=285 Identities=26% Similarity=0.396 Sum_probs=237.0
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.++++ ++++++|.|.++++||+|||.++++|++|..++.|..+ .|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 78999998775 99999999999999999999999999999998877543 5788999999999999997 68999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|...+..+|+.|.+|..+.++.|...+.. +... ..|+|++|++++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------~~g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL---GIVD------------------RDGAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCccc---CccC------------------CCCceEEEEEechHHeEECcCCCCH
Confidence 999999999999999999999999876544 2110 1248999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
++++.+ .++.++|.+ .+..++++|++|+|+|+|.+|++++|+|+.+|+ +|++++.+++++++++++|++.++++...
T Consensus 133 ~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~ 209 (319)
T cd08242 133 EQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE 209 (319)
T ss_pred HHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence 888764 345566654 577889999999999989999999999999999 69999999999999999999887766431
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCCCcC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR 329 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~ 329 (361)
..++++|+++|++|+...++.++++++++ |+++..+.......+ +...+ +++.++.++..+
T Consensus 210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~----- 271 (319)
T cd08242 210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASF--DLTKAVVNEITLVGSRCG----- 271 (319)
T ss_pred ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcc--CHHHheecceEEEEEecc-----
Confidence 12238999999999877889999999998 999987765433333 33333 388888877532
Q ss_pred CcHHHHHHHHHcCCcc
Q 018072 330 TDLPSVVDMYMNKVIR 345 (361)
Q Consensus 330 ~~~~~~~~~~~~~~l~ 345 (361)
.++++++++++++++
T Consensus 272 -~~~~~~~~~~~~~l~ 286 (319)
T cd08242 272 -PFAPALRLLRKGLVD 286 (319)
T ss_pred -cHHHHHHHHHcCCCC
Confidence 388899999998884
No 70
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=9.1e-37 Score=266.49 Aligned_cols=285 Identities=22% Similarity=0.316 Sum_probs=234.0
Q ss_pred cccceeEEEeecCCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCC
Q 018072 7 LILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEG 82 (361)
Q Consensus 7 ~~~~m~a~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~ 82 (361)
++...|++++.+.|+| +++++.++|+....+|+||.+|+.||++|+..++|.++. +.+|.+-|+|++|+|+.+|++
T Consensus 16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~ 95 (354)
T KOG0025|consen 16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN 95 (354)
T ss_pred cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence 5677899999999988 889999999988888999999999999999999999986 568999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072 83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA 162 (361)
Q Consensus 83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~ 162 (361)
+..|++||+|+.... +.|+|++|.+.+++.++
T Consensus 96 vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~Li 127 (354)
T KOG0025|consen 96 VKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDLI 127 (354)
T ss_pred cCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccceE
Confidence 999999999985421 24699999999999999
Q ss_pred ECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHH
Q 018072 163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAK 237 (361)
Q Consensus 163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~----~~~~~~ 237 (361)
++++.++.+.||++.++-.|||+.+.+..++.+||+|+-.|+ +.+|++.+|+|+++|.+.|=++ |+.. -.+.++
T Consensus 128 ~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk 206 (354)
T KOG0025|consen 128 KVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLK 206 (354)
T ss_pred EcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHH
Confidence 999999999999999999999999988999999999988898 9999999999999999665555 5443 334456
Q ss_pred HcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecChhhhccc
Q 018072 238 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNE 315 (361)
Q Consensus 238 ~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~ 315 (361)
.+||++|+...+-. -.+..+..... .+.+.|||+|+ .......+.|.++ |+++.+|.++.. ..++.. .++||+
T Consensus 207 ~lGA~~ViTeeel~--~~~~~k~~~~~~~prLalNcVGG-ksa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts-~lIFKd 281 (354)
T KOG0025|consen 207 SLGATEVITEEELR--DRKMKKFKGDNPRPRLALNCVGG-KSATEIARYLERG-GTMVTYGGMSKQPVTVPTS-LLIFKD 281 (354)
T ss_pred HcCCceEecHHHhc--chhhhhhhccCCCceEEEeccCc-hhHHHHHHHHhcC-ceEEEecCccCCCcccccc-hheecc
Confidence 69999998543321 11111122223 78999999999 5667777899997 999999987733 333333 335699
Q ss_pred cEEEEeeecCCCcCC--------cHHHHHHHHHcCCcc
Q 018072 316 RTLKGTFFGNYKPRT--------DLPSVVDMYMNKVIR 345 (361)
Q Consensus 316 ~~l~g~~~~~~~~~~--------~~~~~~~~~~~~~l~ 345 (361)
++++|+|+..|.+.+ .+.++.+++++|+|.
T Consensus 282 l~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~ 319 (354)
T KOG0025|consen 282 LKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLK 319 (354)
T ss_pred ceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeec
Confidence 999999999986422 236778899999985
No 71
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=4.5e-36 Score=281.53 Aligned_cols=280 Identities=23% Similarity=0.315 Sum_probs=235.5
Q ss_pred eeEEEeecCCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 018072 11 CKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 86 (361)
Q Consensus 11 m~a~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~ 86 (361)
|||+++.+++.+ ++++++|.|.+.++||+|||.++++|++|+..+.|..+ ....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 789999888753 78899999999999999999999999999998877654 34568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (361)
Q Consensus 87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~ 166 (361)
++||+|+..+. .|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence 99999985421 14899999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
++++++++.+++...++|+++ +..++++|++|||+|+ |.+|++++|+|+++|+ .++++..++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999988889999985 5688999999999987 9999999999999999 788888888888888889998888
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeee
Q 018072 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF 323 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~ 323 (361)
+....+ +.+.+..++++ ++|++||++|+ .....++++++++ |+++.+|... .....++... +.+++++.++..
T Consensus 190 ~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQPG--WQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCCch--HHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence 876544 77788888877 99999999998 5778999999998 9999999753 2233333332 348999998876
Q ss_pred cCCC-------cCCcHHHHHHHHHcCCccc
Q 018072 324 GNYK-------PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 324 ~~~~-------~~~~~~~~~~~~~~~~l~~ 346 (361)
..+. ..+.++++++++.++.+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 294 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQLLL 294 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence 5422 1236788999999998864
No 72
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.5e-35 Score=280.58 Aligned_cols=305 Identities=30% Similarity=0.469 Sum_probs=253.2
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.+.++ +.+++.+.|++.++||+||+.++++|+.|+....+..+ ...|.++|+|++|+|+++|+++..|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 78999999876 99999999999999999999999999999988776542 34578899999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|+..+...|+.|..|..++...|+..... |. ...|+|++|+.+|.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYI---GS-------------------RRDGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcceE---ec-------------------ccCCcccceEEechHHeEECcCCCCH
Confidence 999999999999999999999999875332 21 12358999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
++++++ .++.+||+++. ...++++++|+|+|+|.+|++++|+|+.+|...|+++++++++.++++++|++.++++...
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~ 214 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEE 214 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccc
Confidence 999888 57889999874 7889999999999889999999999999999559999889999999999999888887653
Q ss_pred CccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeec-Ch-hhhccccEEEEeeecCCC
Q 018072 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KP-INVLNERTLKGTFFGNYK 327 (361)
Q Consensus 251 ~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~-~~~~~~~~l~g~~~~~~~ 327 (361)
. .+.+....++ ++|++||++|+...+..++++|+++ |+++.+|.......+.. .. ..+.++.++.++......
T Consensus 215 ~---~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 215 D---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred c---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 3 4455566665 7999999998877889999999998 99999996653322221 11 123488999888764322
Q ss_pred --cCCcHHHHHHHHHcCCcc
Q 018072 328 --PRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 328 --~~~~~~~~~~~~~~~~l~ 345 (361)
..+.+++++++++++++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~ 310 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIK 310 (343)
T ss_pred ccchhhHHHHHHHHHcCCCC
Confidence 145678889999988874
No 73
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.4e-36 Score=282.82 Aligned_cols=285 Identities=20% Similarity=0.253 Sum_probs=225.6
Q ss_pred ccccceeEEEeecCCCC------eEEEEe---ecCC-CCCCeEEEEEeEEecCccchhccccCCCCCCCCccccc--cee
Q 018072 6 GLILTCKAAVAWEAGKP------LIIQDV---EVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH--EAA 73 (361)
Q Consensus 6 ~~~~~m~a~~~~~~~~~------~~~~~~---~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~ 73 (361)
....++|.+++.+..+. |++++. +.|. +++|||||||.++++|+.|+..+.+.......|.++|+ |++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~ 83 (348)
T PLN03154 4 GQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGF 83 (348)
T ss_pred CccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEee
Confidence 34566788888543211 777774 5653 47999999999999999987654432222345889998 789
Q ss_pred EEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceee
Q 018072 74 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY 153 (361)
Q Consensus 74 G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~ 153 (361)
|+|+.+|++++.|++||+|+.. |+|+||
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey 111 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEY 111 (348)
T ss_pred EEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEE
Confidence 9999999999999999999732 379999
Q ss_pred EEEeccc--eEE--CCCCCChh-hhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072 154 TVVHSGC--VAK--INPLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD 227 (361)
Q Consensus 154 v~v~~~~--~~~--iP~~~~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~ 227 (361)
++++.+. +++ +|++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++
T Consensus 112 ~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~ 190 (348)
T PLN03154 112 SLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 190 (348)
T ss_pred EEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEc
Confidence 9998753 544 49999986 688899999999999878889999999999998 9999999999999999 899999
Q ss_pred CChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCc-ee
Q 018072 228 RSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VF 305 (361)
Q Consensus 228 ~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~-~~ 305 (361)
++++++++++ ++|+++++++.+.+ ++.+.++.++++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus 191 ~~~~k~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~ 267 (348)
T PLN03154 191 GSSQKVDLLKNKLGFDEAFNYKEEP-DLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSA 267 (348)
T ss_pred CCHHHHHHHHHhcCCCEEEECCCcc-cHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCC
Confidence 9999999987 79999999986531 27777777766689999999998 6889999999998 9999999764321 11
Q ss_pred ---ecChhh-hccccEEEEeeecCCC--cCCcHHHHHHHHHcCCccc
Q 018072 306 ---MTKPIN-VLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 306 ---~~~~~~-~~~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~ 346 (361)
.++... +.+++++.|++.+.+. ..+.++++++++++|++++
T Consensus 268 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~ 314 (348)
T PLN03154 268 SQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY 314 (348)
T ss_pred CCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 112232 3489999998765432 1346788999999999854
No 74
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-35 Score=278.92 Aligned_cols=302 Identities=31% Similarity=0.464 Sum_probs=252.5
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++.++++ +++++.+.|+++++||+|||+++++|+.|+....|..+. .+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 78999999886 999999999999999999999999999999988776543 3688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|++.+...|+.|..|..++.+.|...... |. ...|+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTAV---GV-------------------TRNGGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCccee---cc-------------------CCCCcceeEEEecHHHcEECcCCCCH
Confidence 999999999999999999999999765322 11 11258999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
.+++.+ .++.++++++ +.+++++|++|+|+|+|.+|.+++++|+..|.+.|+++++++++.+.++++|++.++++...
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 214 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE 214 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC
Confidence 998876 6788999986 78899999999999889999999999999998558999999999999999999888877655
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR 329 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~ 329 (361)
+ .... +...++++|++||+++....+..++++++++ |+++.+|.........+++..++ +++++.++... .
T Consensus 215 ~--~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 286 (334)
T cd08234 215 D--PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----P 286 (334)
T ss_pred C--HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----H
Confidence 4 3333 3333348999999998778889999999998 99999987653333444444444 78888877532 3
Q ss_pred CcHHHHHHHHHcCCccc
Q 018072 330 TDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 330 ~~~~~~~~~~~~~~l~~ 346 (361)
..+++++++++++++..
T Consensus 287 ~~~~~~~~~~~~~~l~~ 303 (334)
T cd08234 287 YTFPRAIALLESGKIDV 303 (334)
T ss_pred HHHHHHHHHHHcCCCCh
Confidence 56889999999998753
No 75
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.3e-35 Score=279.02 Aligned_cols=299 Identities=30% Similarity=0.494 Sum_probs=248.4
Q ss_pred eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 90 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd 90 (361)
|||+++..+++.+.++++|.|.+.++||+|||+++++|++|+..+.|..+....|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 78999987555699999999999999999999999999999999888665556688999999999999999999999999
Q ss_pred EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
+|+..++..|+.|.+|..+..+.|.+.... |.. ..|+|++|++++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRAEY---GEE-------------------VDGGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcccc---ccc-------------------cCCeeeeEEEechhheEECCCCCCH
Confidence 999999999999999999999999874221 211 1358999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~ 249 (361)
++++.+++++.+||+++.. +.+.++++++|+|+ |++|++++++++..|. +|+++.+++++.+.++++|.+.+++..+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999999766 88999999999997 9999999999999999 8888889999999998899877775433
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hhccccEEEEeeecCCCc
Q 018072 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP 328 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~ 328 (361)
+.+.+.... ++|++++++|. .....++++++++ |+++.+|....... .++.. ..+++.++.++... .
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPA-PLRPGLLILKEIRIIGSISA---T 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCc-CCCHHHHHhCCcEEEEecCC---C
Confidence 444554443 79999999998 5678999999998 99999987542221 11222 22377787776422 2
Q ss_pred CCcHHHHHHHHHcCCcc
Q 018072 329 RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~ 345 (361)
..++++++++++++.+.
T Consensus 285 ~~~~~~~~~~~~~~~l~ 301 (332)
T cd08259 285 KADVEEALKLVKEGKIK 301 (332)
T ss_pred HHHHHHHHHHHHcCCCc
Confidence 46788899999988874
No 76
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.3e-35 Score=279.21 Aligned_cols=296 Identities=28% Similarity=0.395 Sum_probs=247.3
Q ss_pred eeEEEeecCCC----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072 11 CKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (361)
Q Consensus 11 m~a~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 86 (361)
|||+++.+++. ++++++.+.|.+.++||+||+.++++|++|+..+.|..+....|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 78999998883 48888998888999999999999999999999888766555678899999999999999999999
Q ss_pred CCCCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 87 EVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 87 ~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
++||+|++.+. .+|+.|..|+.+..++|....+. |.. ..|+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT---GYT-------------------VDGGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc---ccc-------------------cCCceEEEEEecchhEEECC
Confidence 99999986544 58999999999999999876544 221 12489999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
+++++.+++.+++++.|||+++ +.++++++++|+|+|+|++|++++++|+..|. +|++++.++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999997 88999999999999999999999999999998 899999999999999999998877
Q ss_pred cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 325 (361)
+.... .++++|+++++.+....++.++++++++ |+++.+|.... ....++...+.++..+.++....
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 283 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANLT 283 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCCC
Confidence 65432 1237999999987778899999999998 99999985431 11122222234677777775332
Q ss_pred CCcCCcHHHHHHHHHcCCccc
Q 018072 326 YKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.+.+++++++++++.++.
T Consensus 284 ---~~~~~~~~~l~~~~~l~~ 301 (329)
T cd08298 284 ---RQDGEEFLKLAAEIPIKP 301 (329)
T ss_pred ---HHHHHHHHHHHHcCCCCc
Confidence 357888899998887754
No 77
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3e-35 Score=278.32 Aligned_cols=299 Identities=29% Similarity=0.403 Sum_probs=245.1
Q ss_pred ecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEe
Q 018072 17 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL 93 (361)
Q Consensus 17 ~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~ 93 (361)
++++.++++++.|.|.|.++|++|||.++++|++|+.++.+.. ...++|.++|+|++|+|+++|++++.|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 5677779999999999999999999999999999998765431 1234577899999999999999999999999999
Q ss_pred ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhh
Q 018072 94 PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 173 (361)
Q Consensus 94 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~a 173 (361)
..+...|+.|..|..+..+.|.+.++. |.. ..|+|++|++++.+.++++|++++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKIF---GVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcceE---eec-------------------CCCcceeEEEeehHHcEECcCCCChHhh
Confidence 999999999999999999999986543 211 1248999999999999999999998655
Q ss_pred hccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCcc
Q 018072 174 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 253 (361)
Q Consensus 174 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~ 253 (361)
+++.++.+|++++ ...+++|++|+|.|+|++|++++|+|+.+|.+.|+++++++++.+.++++|++.++++...+
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~-- 217 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED-- 217 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC--
Confidence 4566888998875 34578999999988899999999999999985588888899999999999998888876554
Q ss_pred HHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCCcH
Q 018072 254 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDL 332 (361)
Q Consensus 254 ~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 332 (361)
+.+.+..++++ ++|++||++|+...+...+++|+++ |+++.+|.......+++....+++++++.+... ....+.+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 294 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETW 294 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhH
Confidence 77788777765 8999999999878889999999998 999999976433333332233447888877652 2223567
Q ss_pred HHHHHHHHcCCcc
Q 018072 333 PSVVDMYMNKVIR 345 (361)
Q Consensus 333 ~~~~~~~~~~~l~ 345 (361)
.++++++++++++
T Consensus 295 ~~~~~~l~~~~l~ 307 (340)
T TIGR00692 295 YTVSRLIQSGKLD 307 (340)
T ss_pred HHHHHHHHcCCCC
Confidence 8899999998875
No 78
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.3e-35 Score=277.73 Aligned_cols=299 Identities=30% Similarity=0.471 Sum_probs=249.0
Q ss_pred eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (361)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~ 91 (361)
||+++.++|..+++++.|.|.+.+++++||+.++++|++|+..+.+......+|.++|||++|+|+++|++++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899999655999999999999999999999999999999988776544556889999999999999999999999999
Q ss_pred EeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072 92 VLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 170 (361)
Q Consensus 92 V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~ 170 (361)
|++.+. .+|++|.+|+++.+++|.+..+. +.. ..|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-------------------TQGGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-------------------cCCccccEEEEcHHHeEECCCCCCH
Confidence 987665 58999999999999999985544 210 1248999999999999999999999
Q ss_pred hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072 171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~ 250 (361)
++++.+++.+.+||+++.. ..++++++|+|+|+|.+|++++++|+..|. +|+++++++++.++++++|++.+++....
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 216 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE 216 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCc
Confidence 9999999899999998744 789999999999988899999999999999 89999999999999999999888876543
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR 329 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~ 329 (361)
+ .... ..+++|+++|++++......+++++++. |+++.+|..... ........++ ++.++.++..+. .
T Consensus 217 ~--~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 217 L--DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred c--hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence 3 2211 2247999999988778889999999998 999999865422 1111122233 888888887554 3
Q ss_pred CcHHHHHHHHHcCCcc
Q 018072 330 TDLPSVVDMYMNKVIR 345 (361)
Q Consensus 330 ~~~~~~~~~~~~~~l~ 345 (361)
..++++++++.++.+.
T Consensus 286 ~~~~~~~~ll~~~~l~ 301 (330)
T cd08245 286 ADLQEALDFAAEGKVK 301 (330)
T ss_pred HHHHHHHHHHHcCCCc
Confidence 5788889999888875
No 79
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.6e-35 Score=280.04 Aligned_cols=281 Identities=21% Similarity=0.261 Sum_probs=224.5
Q ss_pred ceeEEEeecCCC-CeEEEEeec----CCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccce--eEEEEEeCC
Q 018072 10 TCKAAVAWEAGK-PLIIQDVEV----APPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEA--AGVVESVGE 81 (361)
Q Consensus 10 ~m~a~~~~~~~~-~~~~~~~~~----p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~~G~ 81 (361)
.+|++....+.. .|++++.++ |+|+++||||||++++||+.|++.+.|.... ...|+++|+++ .|.+..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 466776544443 399999988 7899999999999999999999988875432 35688899865 455556788
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec-cc
Q 018072 82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GC 160 (361)
Q Consensus 82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~-~~ 160 (361)
.++.|++||+|+.. |+|+||+++|. ..
T Consensus 87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence 88899999999732 37999999999 79
Q ss_pred eEECC-CCCChh-hhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072 161 VAKIN-PLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 237 (361)
Q Consensus 161 ~~~iP-~~~~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~ 237 (361)
++++| +++++. +++++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 678876 788899999999999878889999999999998 9999999999999999 8999999999999999
Q ss_pred H-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCcee----ecCh-hh
Q 018072 238 K-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF----MTKP-IN 311 (361)
Q Consensus 238 ~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~-~~ 311 (361)
+ +|+++++++.+.+ ++.+.++.++++++|++||++|+ ..+..++++++++ |+++.+|........ ..+. ..
T Consensus 194 ~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~ 270 (338)
T cd08295 194 NKLGFDDAFNYKEEP-DLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNI 270 (338)
T ss_pred HhcCCceeEEcCCcc-cHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHH
Confidence 8 9999999875431 26777777765689999999998 7889999999998 999999865432110 1112 22
Q ss_pred hccccEEEEeeecCCCc--CCcHHHHHHHHHcCCccc
Q 018072 312 VLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 312 ~~~~~~l~g~~~~~~~~--~~~~~~~~~~~~~~~l~~ 346 (361)
+++++++.+++.+.+.. .+.++++++++.+++++.
T Consensus 271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~ 307 (338)
T cd08295 271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKY 307 (338)
T ss_pred hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEc
Confidence 34888998876554321 234678889999998864
No 80
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=4.2e-35 Score=276.14 Aligned_cols=304 Identities=25% Similarity=0.376 Sum_probs=251.9
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++...+.+ +++++.+.|.+.+++|+||+.++++|++|+.++.|..+. ...|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 789998844332 888888888899999999999999999999988775432 34578999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|++.+..+|+.|.+|.++.++.|.+..+. |.. ..|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL---GEH-------------------VDGGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhcccccccccccccc---ccc-------------------cCcceeEEEEechHHceeCCCC
Confidence 999999999999999999999999999864332 211 1248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++++++.+++++.+||+++.+...++++++++|+|+ +.+|++++++++..|. +|+.+++++++.+.+.+++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999899999999878888999999999998 7999999999999999 7999999999999998888877776
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhccccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~l~g~~~~ 324 (361)
....+ +.+.+...+.+ ++|++++++|. ..+..++++++++ |+++.+|..... ...++. ..+.+++++.++...
T Consensus 218 ~~~~~--~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRKED--FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCChH--HHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence 55433 55666666655 89999999998 6788999999998 999999876532 223333 224488888887643
Q ss_pred CCCcCCcHHHHHHHHHcCCcc
Q 018072 325 NYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~l~ 345 (361)
. ...+.+++++++++.+.
T Consensus 293 ~---~~~~~~~~~~l~~~~l~ 310 (342)
T cd08266 293 T---KAELDEALRLVFRGKLK 310 (342)
T ss_pred C---HHHHHHHHHHHHcCCcc
Confidence 3 35788889999888764
No 81
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=4.4e-35 Score=276.92 Aligned_cols=298 Identities=27% Similarity=0.415 Sum_probs=239.0
Q ss_pred EeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccc-cCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072 15 VAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 91 (361)
Q Consensus 15 ~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~ 91 (361)
++++.++ +++++.+.|.+.++||+|||.++++|++|+.... +... ...+|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4667776 9999999999999999999999999999987763 3221 1245779999999999999999999999999
Q ss_pred EeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChh
Q 018072 92 VLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD 171 (361)
Q Consensus 92 V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~ 171 (361)
|++.+..+|+.|.+|..|+.+.|.+..+. |.... ..+..|+|+||++++.+.++++|++++.+
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~--------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMR--------------FPHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccce---eeccc--------------cCCCCCceeeEEEechHHeEECcCCCCHH
Confidence 99999999999999999999999875332 11000 00123589999999999999999999999
Q ss_pred hhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC
Q 018072 172 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 251 (361)
Q Consensus 172 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~ 251 (361)
+++. ..++.++|+++.+...+ ++++|||.|+|.+|++++|+|+.+|..+|+++++++++.++++++|+++++++...+
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~ 221 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP 221 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh
Confidence 8876 46888999987555556 999999998899999999999999986799999999999999999999988875533
Q ss_pred ccHHHHHHHHc-C-CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCc
Q 018072 252 RPIQEVIAEMT-N-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP 328 (361)
Q Consensus 252 ~~~~~~i~~~~-~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~ 328 (361)
+ ..+. . +++|+++|++|+...++.++++|+++ |+++.+|.... ....++.. +.+++++.+....
T Consensus 222 --~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---- 288 (339)
T cd08232 222 --L----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG--PVPLPLNALVAKELDLRGSFRF---- 288 (339)
T ss_pred --h----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccCcHHHHhhcceEEEEEecC----
Confidence 2 2222 2 26999999999767889999999998 99999986542 22223333 3388888776522
Q ss_pred CCcHHHHHHHHHcCCcc
Q 018072 329 RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 329 ~~~~~~~~~~~~~~~l~ 345 (361)
.+.+++++++++++++.
T Consensus 289 ~~~~~~~~~~~~~~~i~ 305 (339)
T cd08232 289 DDEFAEAVRLLAAGRID 305 (339)
T ss_pred HHHHHHHHHHHHcCCCC
Confidence 35788999999998874
No 82
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=6.5e-35 Score=274.38 Aligned_cols=274 Identities=20% Similarity=0.241 Sum_probs=221.2
Q ss_pred ceeEEEeecC--CCC----eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072 10 TCKAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 83 (361)
Q Consensus 10 ~m~a~~~~~~--~~~----~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v 83 (361)
+||||++.+. +++ +++++.|.|+|+++||+|||.++|||+.|...... ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 6999999983 343 88999999999999999999999999987653211 124688999999999995 44
Q ss_pred CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc---c
Q 018072 84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG---C 160 (361)
Q Consensus 84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~---~ 160 (361)
+.|++||+|+.. ++|++|++++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999832 268999999999 9
Q ss_pred eEECCCCCC-----hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072 161 VAKINPLAP-----LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE 234 (361)
Q Consensus 161 ~~~iP~~~~-----~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~ 234 (361)
++++|++++ ...++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999987 12334677899999999878899999999999986 9999999999999999 8999999999999
Q ss_pred HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce--e---ec-C
Q 018072 235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---MT-K 308 (361)
Q Consensus 235 ~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~---~~-~ 308 (361)
+++++|+++++++.+.+ +.+.++.++++++|++||++|+ ..+..++++++++ |+++.+|....... . .. .
T Consensus 183 ~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 99999999999987665 7778877776689999999998 7889999999998 99999985432111 1 11 1
Q ss_pred hhhhccccEEEEeeecCCC--cCCcHHHHHHHHHcCCccc
Q 018072 309 PINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 309 ~~~~~~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~ 346 (361)
...+++++++.+++...+. ..+.++++++++++++++.
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 298 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKY 298 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcC
Confidence 1234488999887654431 1234678889999998864
No 83
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-34 Score=274.77 Aligned_cols=292 Identities=26% Similarity=0.298 Sum_probs=232.5
Q ss_pred eeEEEeecCCCC--eEEEE-eecCCCCCCeEEEEEeEEecCccchhccccCCC--------------------CCCCCcc
Q 018072 11 CKAAVAWEAGKP--LIIQD-VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------------------TPLFPRI 67 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~-~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 67 (361)
|||+++.+++.+ +.+.+ .+.|.|.+++|+|||.++++|++|+.++.|..+ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 789998876643 55544 477788999999999999999999998776432 2346889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCc
Q 018072 68 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGT 147 (361)
Q Consensus 68 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~ 147 (361)
+|||++|+|+++|+++++|++||+|++.+...|+.|..|. .|. .. |.. . .
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~---~~---~~~-~------------------~ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DID---YI---GSE-R------------------D 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----ccc---cc---CCC-C------------------C
Confidence 9999999999999999999999999998888888776542 121 11 110 1 1
Q ss_pred ccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE
Q 018072 148 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 226 (361)
Q Consensus 148 G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~ 226 (361)
|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +|+++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 4899999999999999999999999999999999999986 7788999999999998 9999999999999999 68888
Q ss_pred cCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCcee
Q 018072 227 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305 (361)
Q Consensus 227 ~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~ 305 (361)
+.++ +++.++++|++.+++..... +.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|... ....
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDAPL--LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIA-GPVV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCCcc--HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccC-Cccc
Confidence 7665 88888999997665543332 333 344444 89999999998 6889999999998 9999998653 2223
Q ss_pred ecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072 306 MTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 306 ~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~ 345 (361)
.++... +.+++++.++.... .+.++++++++.+++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~ 318 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIR 318 (350)
T ss_pred cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCcc
Confidence 444444 34899999887543 46789999999988874
No 84
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.2e-34 Score=272.52 Aligned_cols=263 Identities=18% Similarity=0.239 Sum_probs=213.7
Q ss_pred eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCC
Q 018072 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGD 102 (361)
Q Consensus 23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~ 102 (361)
+++.+.|.|+|++|||||||.++|+|+.++. |.+.....|.++|.|++|+|++.|+ .|++||+|+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8889999999999999999999999997653 3333334578999999999999774 59999999832
Q ss_pred CccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC----CCCCChhhh-hccc
Q 018072 103 CRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILS 177 (361)
Q Consensus 103 c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i----P~~~~~~~a-a~l~ 177 (361)
++|++|+.++.+.+.++ |++++++++ ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 16899999999988888 899999887 6788
Q ss_pred cchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHH
Q 018072 178 CGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 256 (361)
Q Consensus 178 ~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~ 256 (361)
+++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+.+ .+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHH
Confidence 899999999888899999999999996 9999999999999999 899999999999999999999999887532 2556
Q ss_pred HHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCc---eee---cChhhhccccEEEEeeecCCC---
Q 018072 257 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFM---TKPINVLNERTLKGTFFGNYK--- 327 (361)
Q Consensus 257 ~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~---~~~---~~~~~~~~~~~l~g~~~~~~~--- 327 (361)
.++...++++|++||++|+ ..+..++++++++ |+++.+|...... ..+ .....+++++++.++....+.
T Consensus 199 ~~~~~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 6666655589999999998 5679999999998 9999998654211 111 111234488898887654332
Q ss_pred cCCcHHHHHHHHHcCCcccC
Q 018072 328 PRTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 328 ~~~~~~~~~~~~~~~~l~~~ 347 (361)
..+.++++++++++|++++.
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~ 296 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK 296 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc
Confidence 13467889999999998653
No 85
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.7e-34 Score=273.56 Aligned_cols=269 Identities=17% Similarity=0.202 Sum_probs=207.6
Q ss_pred eEEEEeecCCCC-CCeEEEEEeEEecCccchhccc---cCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 018072 23 LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 98 (361)
Q Consensus 23 ~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 98 (361)
+++++.|.|+|. ++||||||.++|||+.|+.... +.....++|.++|||++|+|+++|+++++|++||+|+..
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 889999999874 9999999999999999864322 111123467899999999999999999999999999732
Q ss_pred CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhh----hh
Q 018072 99 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VC 174 (361)
Q Consensus 99 ~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~----aa 174 (361)
+ ++|+||+++|++.++++|++++.++ ++
T Consensus 100 -------------------------~-----------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 100 -------------------------N-----------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------C-----------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 0 2699999999999999999864432 44
Q ss_pred ccccchhhhhhhhhhhcCCCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCC
Q 018072 175 ILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH 250 (361)
Q Consensus 175 ~l~~~~~ta~~a~~~~~~~~~g--~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~ 250 (361)
.++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+++++ +|+++++++.+.
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~ 211 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD 211 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC
Confidence 5677899999998777888877 99999998 9999999999999998679999999999999876 999999988765
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC---cee--ecC--hhhhc--cccEEEEe
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVF--MTK--PINVL--NERTLKGT 321 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---~~~--~~~--~~~~~--~~~~l~g~ 321 (361)
+ +.+.++.++++++|++||++|+ ..+..++++|+++ |+++.+|..... ... .+. ...+. +++++.+.
T Consensus 212 ~--~~~~i~~~~~~gvd~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (345)
T cd08293 212 N--VAERLRELCPEGVDVYFDNVGG-EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF 287 (345)
T ss_pred C--HHHHHHHHCCCCceEEEECCCc-HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence 5 7788888776689999999998 4679999999998 999999853311 111 111 11112 34444333
Q ss_pred eecCCC--cCCcHHHHHHHHHcCCccc
Q 018072 322 FFGNYK--PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 322 ~~~~~~--~~~~~~~~~~~~~~~~l~~ 346 (361)
....+. ..+.++++++++++++++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~ 314 (345)
T cd08293 288 LVLNYKDKFEEAIAQLSQWVKEGKLKV 314 (345)
T ss_pred EeeccHhHHHHHHHHHHHHHHCCCccc
Confidence 222211 1234567788999998754
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.8e-34 Score=271.54 Aligned_cols=284 Identities=23% Similarity=0.308 Sum_probs=231.7
Q ss_pred eeEEEeecCCCC---eEEEEeecCCCCC-CeEEEEEeEEecCccchhccccCCCCC-C----CCcccccceeEEEEEeCC
Q 018072 11 CKAAVAWEAGKP---LIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWESKGQTP-L----FPRIFGHEAAGVVESVGE 81 (361)
Q Consensus 11 m~a~~~~~~~~~---~~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~~G~ 81 (361)
|||+++.+++.+ +.+++.|.|+|.+ +||+||+.++|+|++|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999999875 8999999999888 999999999999999999887754321 2 577999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072 82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV 161 (361)
Q Consensus 82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~ 161 (361)
++..|++||+|+.... +.|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999985421 0248999999999999
Q ss_pred EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHH
Q 018072 162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEA 236 (361)
Q Consensus 162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~----~~~~~~ 236 (361)
+++|+++++++++.+++++.|||+++.....+++|++|||+|+ |++|++++|+|++.|+ +++++..++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999987 9999999999999999 677766655 678888
Q ss_pred HHcCCCEEEcCCCC-CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hcc
Q 018072 237 KKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLN 314 (361)
Q Consensus 237 ~~~G~~~vv~~~~~-~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~ 314 (361)
+++|+++++++... ...+.+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|..... ...++... +.+
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 268 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFK 268 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhC
Confidence 89999999887653 0126667776665589999999998 5667889999998 999999865422 23333323 448
Q ss_pred ccEEEEeeecCCC---cC----CcHHHHHHHHHcCCccc
Q 018072 315 ERTLKGTFFGNYK---PR----TDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 315 ~~~l~g~~~~~~~---~~----~~~~~~~~~~~~~~l~~ 346 (361)
+.++.+....... .+ ..++++++++.++++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (341)
T cd08290 269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKA 307 (341)
T ss_pred CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccC
Confidence 9999988765432 11 24778889999988754
No 87
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=8.9e-34 Score=267.51 Aligned_cols=279 Identities=19% Similarity=0.181 Sum_probs=225.4
Q ss_pred eEEEeecC---CCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072 12 KAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 86 (361)
Q Consensus 12 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 86 (361)
||+++.++ +.+ +++.++|.|+|+++||+|||+++++|++|..++.+..+..++|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57777775 433 8888999999999999999999999999998887765545678899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (361)
Q Consensus 87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~ 166 (361)
++||+|+.... ....|+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~----------------------------------------------~~~~g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD----------------------------------------------IDRPGSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC----------------------------------------------CCCCCcccceEEEcHHHcccCCC
Confidence 99999984310 00124899999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHc
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF 239 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~-----g~~VlI~G~-g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~ 239 (361)
++++++++.+++++.|||+++.+..++.+ |++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.++++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999877788877 999999987 99999999999998 88 899999999999999999
Q ss_pred CCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEE
Q 018072 240 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL 318 (361)
Q Consensus 240 G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l 318 (361)
|+++++++.. + +.+.++.+.++++|+++|++++...+..++++++++ |+++.++.. ..++ ...+. +++++
T Consensus 194 g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~--~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK-P--LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELD--ISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC-C--HHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---cccc--chhhhhcceEE
Confidence 9999988654 3 667777754448999999987768889999999998 999988532 1222 22233 55766
Q ss_pred EEeeecC--CC-c------CCcHHHHHHHHHcCCccc
Q 018072 319 KGTFFGN--YK-P------RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 319 ~g~~~~~--~~-~------~~~~~~~~~~~~~~~l~~ 346 (361)
.+..+.. .. . ...++++++++.+++++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~ 301 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRT 301 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeec
Confidence 6543321 11 0 134678889999988753
No 88
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=8.5e-34 Score=258.57 Aligned_cols=269 Identities=32% Similarity=0.500 Sum_probs=224.8
Q ss_pred eEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCc
Q 018072 37 EVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 115 (361)
Q Consensus 37 evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 115 (361)
||+|||.++++|+.|+..+.+..+ ...+|.++|||++|+|+++|++++.|++||+|+..+...|+.|..|.. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999887654 345688999999999999999999999999999999999999999997 676
Q ss_pred ccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCC
Q 018072 116 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 195 (361)
Q Consensus 116 ~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~ 195 (361)
...+. + ....|+|++|+.++.+.++++|+++++++++.++.++.+||+++.+...+++
T Consensus 77 ~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGIL---G-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCEe---c-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 54433 1 1123589999999999999999999999999998999999999877777799
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 274 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g 274 (361)
+++|+|+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++....+ ..+.+. ...+ ++|+++++++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCC
Confidence 9999999986699999999999997 899999999999999999998888776554 555555 4444 8999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCCcHHHHHHHH
Q 018072 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY 339 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 339 (361)
+...+..++++++++ |+++.+|..............+.+++++.++..+.+ ++++++++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 271 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDLL 271 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhhC
Confidence 867788999999998 999999977644333333333459999999987654 5788777653
No 89
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.6e-33 Score=262.03 Aligned_cols=298 Identities=28% Similarity=0.350 Sum_probs=242.3
Q ss_pred eeEEEeecCC--CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++...+ +.+++++.+.|.+.++|++||+.++++|++|+....+..+. ...|.++|||++|+|+++|+.+.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7999999664 23888888888899999999999999999999987765432 34688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|++.....|..|.. +.|...... | .+..|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~------~~~~~~~~~---~-------------------~~~~g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPP------TAEDEASAL---G-------------------GPIDGVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccccc------ccccccccc---c-------------------cccCceeeeEEEecHHHeEECCCC
Confidence 999999876665544333 333211111 1 111348999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
+++.+++.+++++.+||+++.+...+++|++|+|+|+|++|++++++|++.|+ +|++++.++++++.++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998777889999999999889999999999999999 79999999999999999999998886
Q ss_pred CC-CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeec
Q 018072 248 SE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG 324 (361)
Q Consensus 248 ~~-~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~ 324 (361)
.. .+ +.+.+..++++ ++|+++|+++. ..+..+++++++. |+++.+|....... ...... +.+++++.++..+
T Consensus 212 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 286 (336)
T cd08276 212 RTTPD--WGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEA-PVLLLPLLTKGATLRGIAVG 286 (336)
T ss_pred CcccC--HHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCcc-CcCHHHHhhcceEEEEEecC
Confidence 55 33 67778888776 89999999986 6788999999998 99999997653322 222233 4489999988765
Q ss_pred CCCcCCcHHHHHHHHHcCCcc
Q 018072 325 NYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~l~ 345 (361)
. .+.++++++++.++.+.
T Consensus 287 ~---~~~~~~~~~l~~~~~l~ 304 (336)
T cd08276 287 S---RAQFEAMNRAIEAHRIR 304 (336)
T ss_pred c---HHHHHHHHHHHHcCCcc
Confidence 4 46788889999877764
No 90
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=5.1e-33 Score=261.47 Aligned_cols=238 Identities=26% Similarity=0.339 Sum_probs=210.7
Q ss_pred ceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 10 ~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
+|||+++.++|.+ +++++++.|.|.++||+|||.++|+|++|+.+..+.++....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 4999999988765 88999999999999999999999999999998877665555688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+.... +.|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------------------------~~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------------------------ALGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------------------------CCcceeeEEEcCHHHceeCCCC
Confidence 9999973210 0148999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++++++.++.++.+||+++.+...+.+|++|+|+|+ |.+|++++|+|+.+|+ +|++++.+++++++++++|++.+++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999988899999998877788999999999976 9999999999999999 7999999999999999999988887
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
....+ +.+.++.++++ ++|++||++++ ..+..++++++++ |+++.+|...
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~ 242 (327)
T PRK10754 192 YREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNAS 242 (327)
T ss_pred CCCCc--HHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCC
Confidence 76544 77788888876 89999999998 6788899999998 9999999764
No 91
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.5e-32 Score=257.54 Aligned_cols=281 Identities=21% Similarity=0.239 Sum_probs=230.2
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
|||+++++++.+ +++.+.+.|.+.+++|+|||.++++|++|+....|..+. ...|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 789999876653 677777878889999999999999999999888775432 345788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
+++||+|+.... ...|+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~-----------------------------------------------~~~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG-----------------------------------------------RAGGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC-----------------------------------------------CCCceeeEEEEEchHHeEeCC
Confidence 999999985421 002489999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v 244 (361)
+++++++++.+++++.||| ++.+...++++++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 5577888999999999996 9999999999999999 89999999999999999999888
Q ss_pred EcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEee
Q 018072 245 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF 322 (361)
Q Consensus 245 v~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~ 322 (361)
++....+ +.+.+..++++ ++|+++|++|+. ....+++++++. |+++.+|...... ..++... +.+++++.++.
T Consensus 192 ~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTRPD--WPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCCcc--HHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence 8776554 67777777766 899999999985 568999999998 9999999765332 2444333 34889998877
Q ss_pred ecCCCc---CCcHHHHHHHHHcCCcc
Q 018072 323 FGNYKP---RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 323 ~~~~~~---~~~~~~~~~~~~~~~l~ 345 (361)
...... .+.+++++++++++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~l~ 292 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGRLV 292 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCcc
Confidence 544321 24567788888888764
No 92
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-32 Score=257.51 Aligned_cols=283 Identities=21% Similarity=0.272 Sum_probs=229.3
Q ss_pred ceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 018072 10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 86 (361)
Q Consensus 10 ~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~ 86 (361)
||||+++.+++.. +.+++.+.|.+.++|++|||.++++|+.|+....+..+ ....|.++|||++|+|+++|+++..+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6999999988763 67778888888999999999999999999988876543 23456789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (361)
Q Consensus 87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~ 166 (361)
++||+|+... . .|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~------------------~g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------P------------------GGGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------C------------------CCceeeEEEecHHHcEeCCC
Confidence 9999998431 0 13899999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
+++..+++.+++++.+||+++.+...+++|++|+|+|+ |.+|++++++|++.|+ .++.+.+++++.+.++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999877788999999999996 9999999999999999 667788999999999999998888
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeee
Q 018072 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFF 323 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~ 323 (361)
+....+ .+.+.+..++++ ++|++||++++ ..+..++++++++ |+++.+|........+++...++ ++.++.++..
T Consensus 191 ~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 191 RYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred ecCChh-HHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence 765432 256667777765 89999999987 7889999999998 99999986543221114433334 7778888765
Q ss_pred cCCCc--C-----CcHHHHHHHHHcCCcc
Q 018072 324 GNYKP--R-----TDLPSVVDMYMNKVIR 345 (361)
Q Consensus 324 ~~~~~--~-----~~~~~~~~~~~~~~l~ 345 (361)
..... . +.+++++++++++.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (334)
T PTZ00354 268 RSRSDEYKADLVASFEREVLPYMEEGEIK 296 (334)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHCCCcc
Confidence 44221 0 1236677888888764
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.2e-32 Score=257.32 Aligned_cols=280 Identities=25% Similarity=0.317 Sum_probs=230.1
Q ss_pred ceeEEEeecCCC----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018072 10 TCKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS 84 (361)
Q Consensus 10 ~m~a~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~ 84 (361)
.|||+++.+++. ++++++++.|.|.++|++|||.++|+|++|+.+..|..+. ..+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 399999998766 3889999999999999999999999999999988775542 45788999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072 85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (361)
Q Consensus 85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i 164 (361)
.+++||+|+... .|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999998531 148999999999999999
Q ss_pred CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072 165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (361)
Q Consensus 165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~ 243 (361)
|++ ..+++.++.++.|||+++.+...+++|++|+|+|+ |.+|++++|+|++.|+ +|+++.+++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 34677888899999999877788999999999996 9999999999999999 7999989999999999999988
Q ss_pred EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC---------ceeecChhhhcc
Q 018072 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---------AVFMTKPINVLN 314 (361)
Q Consensus 244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---------~~~~~~~~~~~~ 314 (361)
+++....+ +.+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|..... ....+....+.+
T Consensus 188 v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKTED--LGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 88765544 6666666555589999999997 7889999999998 999999876532 111223333448
Q ss_pred ccEEEEeeecCCC--cCCcHHHHHHHHHcCCccc
Q 018072 315 ERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 315 ~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~ 346 (361)
++++.++...... ..+.+.++++++.++.++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 297 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVC 297 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeee
Confidence 8999887654321 1345678888888887754
No 94
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=1.7e-32 Score=242.15 Aligned_cols=268 Identities=18% Similarity=0.246 Sum_probs=219.2
Q ss_pred eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEeecCCCCC
Q 018072 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVG--EGVSDLEVGDHVLPVFTGEC 100 (361)
Q Consensus 23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G--~~v~~~~~Gd~V~~~~~~~c 100 (361)
+++++.++|+|++||||||+++.|+++..+..++- .++.-.|+-+|..++|.++... |+...|++||.|...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 99999999999999999999999999965544332 2334457777877655444322 667889999999833
Q ss_pred CCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh--hhhhcccc
Q 018072 101 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL--DKVCILSC 178 (361)
Q Consensus 101 ~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~--~~aa~l~~ 178 (361)
. +|+||.+++.+.+.|+++..-+ .....+..
T Consensus 101 -------------------------~----------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 101 -------------------------S----------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred -------------------------c----------------------cceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 2 7999999999999999865322 23344677
Q ss_pred chhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHH
Q 018072 179 GVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQE 256 (361)
Q Consensus 179 ~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~ 256 (361)
+..|||.+|++..++|+|++|+|.+| |++|..+.|+||..|. +|+++...++|.+++.+ +|.|..+||+.++ +.+
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~ 210 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQ 210 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHH
Confidence 99999999999999999999999987 9999999999999999 99999999999999988 9999999999987 999
Q ss_pred HHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC--h---hhhc-cccEEEEeeecC-CCc-
Q 018072 257 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK--P---INVL-NERTLKGTFFGN-YKP- 328 (361)
Q Consensus 257 ~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~---~~~~-~~~~l~g~~~~~-~~~- 328 (361)
.+++..+.|+|+.||++|+ +.+++.+..|+.. +|+.+||..++......+ + ..++ +++++.|+...+ +..
T Consensus 211 ~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~ 288 (340)
T COG2130 211 ALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR 288 (340)
T ss_pred HHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence 9999999999999999999 8999999999997 999999976644322111 1 1233 899999998733 321
Q ss_pred -CCcHHHHHHHHHcCCcccCC
Q 018072 329 -RTDLPSVVDMYMNKVIRFSS 348 (361)
Q Consensus 329 -~~~~~~~~~~~~~~~l~~~~ 348 (361)
++..+++..|+++|||+..+
T Consensus 289 ~~e~~~~l~~wv~~GKi~~~e 309 (340)
T COG2130 289 FPEALRELGGWVKEGKIQYRE 309 (340)
T ss_pred hHHHHHHHHHHHHcCceeeEe
Confidence 34568899999999997654
No 95
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.2e-32 Score=257.57 Aligned_cols=243 Identities=28% Similarity=0.376 Sum_probs=206.7
Q ss_pred eeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 11 m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
|||+++..++ ..+++++.+.|+|+++||+|||.++++|++|+....+.. ....|.++|||++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 7899999884 238899999999999999999999999999998775543 12357789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|+..+...|+ + ....|+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~------------~-----------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP------------N-----------------------------DPRNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC------------C-----------------------------CCCCCcccceEEechhheEECCCCCC
Confidence 999966433221 0 01124899999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCC----------CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKP----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~----------~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~ 238 (361)
+++++.+++++.|||+++.+..++ .++++|+|+|+ |.+|++++++|+++|+ +|+.+. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999997666544 78999999997 8999999999999999 787776 5689999999
Q ss_pred cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC--CCcEEEEEcCCC
Q 018072 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD--GWGVAVLVGVPS 300 (361)
Q Consensus 239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~ 300 (361)
+|++++++....+ +.+.++.++++++|++||++|++..+..+++++++ + |+++.+|...
T Consensus 197 ~g~~~v~~~~~~~--~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~ 257 (339)
T cd08249 197 LGADAVFDYHDPD--VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVP 257 (339)
T ss_pred cCCCEEEECCCch--HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCC
Confidence 9999998876654 77778777767899999999986788999999999 8 9999998765
No 96
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.1e-31 Score=253.03 Aligned_cols=281 Identities=19% Similarity=0.200 Sum_probs=228.8
Q ss_pred eeEEEeecCCCC-----eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018072 11 CKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 11 m~a~~~~~~~~~-----~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
|||+++.++++. +.+++++.|++.+++|+||+.++++|++|+..+.+..+..+.|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999998863 556677888889999999999999999999887775544456778999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
|++||+|+.... . ...|+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~------------------~~~g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGD----------------------------I------------------TRPGSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCC----------------------------C------------------CCCccceEEEEEchHHeeeCC
Confidence 999999985310 0 012489999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~-----g~~VlI~G~-g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~ 238 (361)
++++.++++.+++++.+||+++.+.+.+.+ |++|+|+|+ |++|++++|+|+.+| . +|++++.++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999999877788877 999999986 999999999999999 6 89999999999999999
Q ss_pred cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccE
Q 018072 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERT 317 (361)
Q Consensus 239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~ 317 (361)
+|++.+++... + +.+.+.....+++|++||++|++..+..++++++++ |+++.+|... . .++...+ .++++
T Consensus 194 ~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ-D--LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccce
Confidence 99998887653 3 555665444348999999999778899999999998 9999998653 2 2333334 48888
Q ss_pred EEEeeecCCC--c-------CCcHHHHHHHHHcCCccc
Q 018072 318 LKGTFFGNYK--P-------RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 318 l~g~~~~~~~--~-------~~~~~~~~~~~~~~~l~~ 346 (361)
+.+..+.... . ...++++++++.++.++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 303 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKT 303 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEec
Confidence 8876654311 1 123677889998888764
No 97
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.5e-31 Score=250.71 Aligned_cols=269 Identities=23% Similarity=0.337 Sum_probs=226.1
Q ss_pred eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 018072 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG 101 (361)
Q Consensus 23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~ 101 (361)
+++++.|.|.+.+++|+|||+++++|+.|..++.+.... ..+|.++|||++|+|+++|++++.+++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999888765432 346789999999999999999999999999985421
Q ss_pred CCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchh
Q 018072 102 DCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 181 (361)
Q Consensus 102 ~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ 181 (361)
.|+|++|+.++.+.++++|+++++.+++.++++..
T Consensus 90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 13899999999999999999999999999988999
Q ss_pred hhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHH
Q 018072 182 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 260 (361)
Q Consensus 182 ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~ 260 (361)
+||+++.+...+.+|++|+|+|+ |.+|++++|+|+++|+ .|+++.+++++++.++++|++.++++...+ +.+.+..
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHH
Confidence 99999877788899999999987 8999999999999999 788888999999999999999988876544 6777777
Q ss_pred HcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc-------CCc
Q 018072 261 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTD 331 (361)
Q Consensus 261 ~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~-------~~~ 331 (361)
++++ ++|++||++|+ .....++++++++ |+++.+|..... ...++...+. +++++.++....+.. .+.
T Consensus 202 ~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGG-ESATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCC-HHHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 7776 89999999998 4567889999998 999999876543 3344445455 899999887665421 134
Q ss_pred HHHHHHHHHcCCccc
Q 018072 332 LPSVVDMYMNKVIRF 346 (361)
Q Consensus 332 ~~~~~~~~~~~~l~~ 346 (361)
+++++++++++++..
T Consensus 279 ~~~~~~~l~~~~l~~ 293 (323)
T cd05282 279 FAEVIKLVEAGVLTT 293 (323)
T ss_pred HHHHHHHHhCCCccc
Confidence 677888888888753
No 98
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-31 Score=249.08 Aligned_cols=267 Identities=25% Similarity=0.304 Sum_probs=217.1
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
|||+++.+.+ + +++++.+.|.+.++||+|||.++++|+.|+....+ ...|.++|||++|+|+++|+++..|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCC
Confidence 6899998754 3 77779999999999999999999999999887552 223678999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|+... ..|+|++|+.++.+.++++|+++
T Consensus 76 Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG-------------------------------------------------AMGAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec-------------------------------------------------CCcceeeEEEEchHHeEECCCCC
Confidence 99998431 01489999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
++++++.+++++.|||+++.+.... +|++|+|+|+ |++|++++++|+..|+ +|+.+++++++++.++++|++.+++.
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999997655544 5999999998 9999999999999999 89999999999999999998765543
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc---cccEEEEeeec
Q 018072 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFG 324 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~---~~~~l~g~~~~ 324 (361)
.. .+.++++|+++|++|+ ..+..++++++.+ |+++.+|... .....++...+. ++.++.++..+
T Consensus 185 ~~----------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 185 GS----------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred cc----------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 22 1122479999999998 5789999999998 9999999765 222333333333 48889888765
Q ss_pred C-CCcCCcHHHHHHHHHcCCccc
Q 018072 325 N-YKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 325 ~-~~~~~~~~~~~~~~~~~~l~~ 346 (361)
. ......++.++++++++++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~ 274 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDP 274 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccc
Confidence 3 112356788889999998863
No 99
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=2.1e-31 Score=249.84 Aligned_cols=263 Identities=21% Similarity=0.245 Sum_probs=211.8
Q ss_pred eeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++.+++. +++++++|.|+|+++||+|||.++++|++|+.++.|..+. ..+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999885 5999999999999999999999999999999988775432 345789999999999998 457899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..+.. .|+ ...|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGYD------------------------LGM-------------------NTDGGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEcccc------------------------cCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence 99999864210 011 11248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhc--CCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072 168 APLDKVCILSCGVSTGLGATLNVA--KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~--~~~-~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~ 243 (361)
+++++++.+++++.++|+++.... ++. .+++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999999875443 335 4579999998 9999999999999999 7999999999999999999998
Q ss_pred EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 322 (361)
Q Consensus 244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~ 322 (361)
+++.... ..+..+....+++|++||++++ ..+..++++++++ |+++.+|..... ...+++..+ .+++++.++.
T Consensus 195 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd05280 195 VLDREDL---LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGID 268 (325)
T ss_pred EEcchhH---HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEE
Confidence 8875432 1122233333489999999998 6889999999998 999999976532 223344444 4899999877
Q ss_pred ecC
Q 018072 323 FGN 325 (361)
Q Consensus 323 ~~~ 325 (361)
...
T Consensus 269 ~~~ 271 (325)
T cd05280 269 SVN 271 (325)
T ss_pred eec
Confidence 554
No 100
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.6e-31 Score=246.86 Aligned_cols=272 Identities=24% Similarity=0.317 Sum_probs=219.7
Q ss_pred ecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhcc-ccCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCEEe
Q 018072 17 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL 93 (361)
Q Consensus 17 ~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~ 93 (361)
.++++ +++++++.|++.++||+|||.++++|++|+..+ .+... .+.+|.++|+|++|+|+++|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34555 999999999999999999999999999999887 55432 123478999999999999999999999999998
Q ss_pred ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhh
Q 018072 94 PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 173 (361)
Q Consensus 94 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~a 173 (361)
... .|+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence 542 1389999999999999999998 233
Q ss_pred hccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCcc
Q 018072 174 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 253 (361)
Q Consensus 174 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~ 253 (361)
+.+..++.++++++. ..++++|++|+|+|+|.+|++++|+|+..|.+.|+++.+++++.++++++|++.+++....+
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-- 185 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA-- 185 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--
Confidence 333367889998864 78899999999998899999999999999994499999999999999999998888765444
Q ss_pred HHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCC-CcCC
Q 018072 254 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY-KPRT 330 (361)
Q Consensus 254 ~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~-~~~~ 330 (361)
+.+.+..++.+ ++|+++|++|+...+..++++|+++ |+++.+|... .....+++.. .++++++.++..... ...+
T Consensus 186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (312)
T cd08269 186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE 263 (312)
T ss_pred HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence 77788877776 8999999998877889999999998 9999998754 2223333332 348888877654332 1235
Q ss_pred cHHHHHHHHHcCCccc
Q 018072 331 DLPSVVDMYMNKVIRF 346 (361)
Q Consensus 331 ~~~~~~~~~~~~~l~~ 346 (361)
.++++++++++++++.
T Consensus 264 ~~~~~~~~~~~~~l~~ 279 (312)
T cd08269 264 GMREAVKLIADGRLDL 279 (312)
T ss_pred HHHHHHHHHHcCCCCc
Confidence 7889999999998764
No 101
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.5e-31 Score=247.47 Aligned_cols=283 Identities=24% Similarity=0.375 Sum_probs=226.0
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
||++++...+.. +++.+.+.|.++++|++|||.++++|+.|+..+.+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 688998876642 67778888888999999999999999999998877654455688999999999999995 57999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|+..... . | ....|+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~--------------~----------~-------------------~~~~g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG--------------M----------G-------------------RTFDGSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC--------------C----------C-------------------CCCCcccceEEEcCHHHcEeCCCCC
Confidence 9999854210 0 0 0012489999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
++++++.+++++.|||+++.+...+++|++|+|+|+ |.+|++++|+|+..|+ +|+++..++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999877788999999999997 9999999999999999 79999999999999999999887754
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceee-cChhh---hccccEEEEeee
Q 018072 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-TKPIN---VLNERTLKGTFF 323 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~---~~~~~~l~g~~~ 323 (361)
..+ +.+.+..+ +.++|+++|++|+ ..+..++++++++ |+++.+|......... ..... +.+++++.++..
T Consensus 195 -~~~--~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -DGA--IAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -Ccc--HHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 222 66677767 4589999999998 6889999999998 9999999754222211 11111 236777777653
Q ss_pred cCCCcCCcHHHHHHHHHcCCccc
Q 018072 324 GNYKPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~l~~ 346 (361)
.... ...++.++++++++.++.
T Consensus 269 ~~~~-~~~~~~~~~~~~~~~~~~ 290 (320)
T cd08243 269 GDVP-QTPLQELFDFVAAGHLDI 290 (320)
T ss_pred hhhh-HHHHHHHHHHHHCCceec
Confidence 3221 235788889998888753
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=6.5e-31 Score=246.85 Aligned_cols=261 Identities=20% Similarity=0.210 Sum_probs=208.4
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC-CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++.+++++ +.+++.|.|.|.++||+||+.++++|++|.....+.+ ....+|.++|||++|+|++.| +..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 799999988764 7889999999999999999999999999987654322 123458899999999999954 57799
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..+.. +|. ...|+|+||+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGV-------------------SHHGGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCC-------------------CCCCcceeEEEEcHHHeEECCCC
Confidence 99999865310 010 11248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhh--cC-CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072 168 APLDKVCILSCGVSTGLGATLNV--AK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~--~~-~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~ 243 (361)
+++++++.+++++.|||.++... .. ...+++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999999886432 23 345789999998 9999999999999999 8999999999999999999988
Q ss_pred EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 322 (361)
Q Consensus 244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~ 322 (361)
+++..+. ..+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|.... ...+.....+ .+++++.++.
T Consensus 195 v~~~~~~---~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREEL---QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchhH---HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence 8876542 2344555544489999999998 7889999999998 99999997642 2223223334 4899999875
Q ss_pred e
Q 018072 323 F 323 (361)
Q Consensus 323 ~ 323 (361)
.
T Consensus 269 ~ 269 (326)
T cd08289 269 S 269 (326)
T ss_pred e
Confidence 3
No 103
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2e-31 Score=249.56 Aligned_cols=267 Identities=28% Similarity=0.422 Sum_probs=203.7
Q ss_pred eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCC----CCcccccceeEE---EEEeC-CCCCCCCCCCEEee
Q 018072 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL----FPRIFGHEAAGV---VESVG-EGVSDLEVGDHVLP 94 (361)
Q Consensus 23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~----~p~~~G~e~~G~---V~~~G-~~v~~~~~Gd~V~~ 94 (361)
...++.++|.|++++++|++.++++|+.|+.+..|.+.... +|.+++.++.|+ +...| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 56688999999999999999999999999999998775543 675555555554 33444 23334555655542
Q ss_pred cCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhh
Q 018072 95 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC 174 (361)
Q Consensus 95 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa 174 (361)
. ...|+|+||+++|...++++|+++++++||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 123589999999999999999999999999
Q ss_pred ccccchhhhhhhhhhhc------CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 175 ILSCGVSTGLGATLNVA------KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 175 ~l~~~~~ta~~a~~~~~------~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
+++.++.|||.++++.. +.++|++|||+|+ |++|++++|+|+..++ ..+++.+++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999976 8999999999999996 55666699999999999999999999
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecC-hh------h----hccc
Q 018072 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK-PI------N----VLNE 315 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~-~~------~----~~~~ 315 (361)
++.+ +.+.++..+.++||+||||+|+ .....+..++... |+...++..... .+.+.. .. . ..++
T Consensus 210 ~~~~--~~e~~kk~~~~~~DvVlD~vg~-~~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
T KOG1198|consen 210 KDEN--VVELIKKYTGKGVDVVLDCVGG-STLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG 285 (347)
T ss_pred CCHH--HHHHHHhhcCCCccEEEECCCC-CccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence 9966 8889888884599999999999 4778888888887 765555443311 111111 00 0 0111
Q ss_pred cEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072 316 RTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 316 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~ 345 (361)
..+.... -..+.+.++.+.++++.+++.
T Consensus 286 ~~~~~~~--~~~~~~~l~~l~~~ie~gkik 313 (347)
T KOG1198|consen 286 VNYRWLY--FVPSAEYLKALVELIEKGKIK 313 (347)
T ss_pred cceeeee--ecCCHHHHHHHHHHHHcCccc
Confidence 1111111 122467788999999999884
No 104
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.9e-30 Score=243.43 Aligned_cols=279 Identities=18% Similarity=0.208 Sum_probs=216.2
Q ss_pred eEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 12 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
||+++...+.+ ++++++|.|.+.++||+|||.++++|++|+..+.|..+. ...|.++|||++|+|++ +++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 67888877664 789999999999999999999999999999988776532 34588999999999998 56678999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|++.+.. . |. ...|+|++|+.+|.+.++++|+++
T Consensus 79 Gd~V~~~~~~--------------~----------~~-------------------~~~g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG--------------L----------GV-------------------SHDGGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC--------------C----------CC-------------------CCCccceEEEEEchhheEECCCCC
Confidence 9999865310 0 00 012489999999999999999999
Q ss_pred Chhhhhccccchhhhhhhhhh--hcCCCCCC-EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072 169 PLDKVCILSCGVSTGLGATLN--VAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~-~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v 244 (361)
++++++.+++.+.+||.++.. ...+.+|+ +|+|+|+ |.+|++++|+|+++|+ +++++..++++.+.++++|++.+
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 999999999899999887533 34488998 9999998 9999999999999999 78888788888899999999888
Q ss_pred EcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeee
Q 018072 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF 323 (361)
Q Consensus 245 v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~ 323 (361)
++..+.+ ..++.+..+++|+++|++|+ ..+..++++++++ |+++.+|.... .....+...+ .+++++.+...
T Consensus 195 ~~~~~~~----~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDREDLS----PPGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred EccccHH----HHHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence 8764422 24445554479999999998 5788999999998 99999997642 2233332334 58999988764
Q ss_pred cCCCcCC----cHHHHHHHHHcCCc
Q 018072 324 GNYKPRT----DLPSVVDMYMNKVI 344 (361)
Q Consensus 324 ~~~~~~~----~~~~~~~~~~~~~l 344 (361)
.... .+ .+..+.+++..+.+
T Consensus 268 ~~~~-~~~~~~~~~~~~~~~~~~~~ 291 (323)
T TIGR02823 268 VYCP-MALREAAWQRLATDLKPRNL 291 (323)
T ss_pred cccC-chhHHHHHHHHHHHhhcCCC
Confidence 3221 12 23445556656654
No 105
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=4.4e-31 Score=250.54 Aligned_cols=236 Identities=25% Similarity=0.336 Sum_probs=198.3
Q ss_pred eeEEEeecCCCC---eEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCC---------------CCCCCcccccc
Q 018072 11 CKAAVAWEAGKP---LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGHE 71 (361)
Q Consensus 11 m~a~~~~~~~~~---~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 71 (361)
|||+++.+++++ +++++.+.|.|. ++||+|||+++++|++|+.+..+... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999888875 889999999994 99999999999999999998776421 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccce
Q 018072 72 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFS 151 (361)
Q Consensus 72 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~a 151 (361)
++|+|+++|+++.++++||+|+..+.. +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999864311 0124899
Q ss_pred eeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCC----CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE
Q 018072 152 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE----RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 226 (361)
Q Consensus 152 e~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~----~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~ 226 (361)
+|+.++.+.++++|+++++++++.+++++.|||+++.+...+. +|++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 9999999999999999999999999999999999976766665 4999999996 9999999999999999 78777
Q ss_pred cCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 227 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 227 ~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
.++ ++.+.++++|++.+++....+ +.+.+... +++|++||++|++ .+..++++++++ |+++.+|...
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~ 260 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNNED--FEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPL 260 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCChh--HHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCc
Confidence 654 678888999998888765533 44444321 3799999999984 889999999998 9999998643
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.98 E-value=5.6e-30 Score=238.73 Aligned_cols=281 Identities=27% Similarity=0.350 Sum_probs=229.0
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++.+.+.+ +++++.+.|.+.+++++|||.++++|++|+....+..+. ..+|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999886543 778888888889999999999999999999887665432 34678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~------------------~g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL-------------------------------A------------------GGGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec-------------------------------C------------------CCceeEEEEcCHHHhccCCCC
Confidence 999998431 0 138999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++.+++.++.++.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+ .|+.+++++++++.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877788999999999997 9999999999999999 7999999999999999999988877
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~ 324 (361)
....+ +.+.+..+..+ ++|+++|++|+ ..+..++++++++ |+++.+|...... ..++...+ .+++++.++...
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRTED--FAEEVKEATGGRGVDVILDMVGG-DYLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCchh--HHHHHHHHhCCCCeEEEEECCch-HHHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeecc
Confidence 66544 66667766655 89999999998 5578899999998 9999998754222 23333444 389999988765
Q ss_pred CCCc-------CCcHHHHHHHHHcCCccc
Q 018072 325 NYKP-------RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 325 ~~~~-------~~~~~~~~~~~~~~~l~~ 346 (361)
.... ...++++++++.++++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRIRP 294 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCccC
Confidence 4311 112456777888887753
No 107
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.98 E-value=4.9e-30 Score=241.19 Aligned_cols=278 Identities=20% Similarity=0.256 Sum_probs=220.1
Q ss_pred eeEEEeecCCC------CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCC
Q 018072 11 CKAAVAWEAGK------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGE 81 (361)
Q Consensus 11 m~a~~~~~~~~------~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~ 81 (361)
.|||++.+.++ .++++++|.|.+.+++|+|||.++++|+.|.....+.... ...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 46777765442 2889999999999999999999999999876655443211 12355789999999999996
Q ss_pred CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec-cc
Q 018072 82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GC 160 (361)
Q Consensus 82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~-~~ 160 (361)
. .+++||+|+.. ++|++|+.++. +.
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 4 79999999832 26999999999 99
Q ss_pred eEECCCCCC--hhhhhc-cccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072 161 VAKINPLAP--LDKVCI-LSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236 (361)
Q Consensus 161 ~~~iP~~~~--~~~aa~-l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~ 236 (361)
++++|++++ ..+++. +++++.|||+++.+...+.+|++|+|+|+ |++|++++|+|+..|+ +|+++++++++.+.+
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999985 445545 88899999999877788999999999986 9999999999999999 899999999999999
Q ss_pred HH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceee----c-Chh
Q 018072 237 KK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----T-KPI 310 (361)
Q Consensus 237 ~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~----~-~~~ 310 (361)
++ +|++.++++.+.+ +.+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|......... + ...
T Consensus 187 ~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 262 (329)
T cd05288 187 VEELGFDAAINYKTPD--LAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN 262 (329)
T ss_pred HhhcCCceEEecCChh--HHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence 88 9999888876644 6677777765689999999998 6889999999998 9999998655322211 1 222
Q ss_pred hhccccEEEEeeecCCCc--CCcHHHHHHHHHcCCcccC
Q 018072 311 NVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKVIRFS 347 (361)
Q Consensus 311 ~~~~~~~l~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 347 (361)
.+.++.++.++....... .+.+.++++++.++.++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~ 301 (329)
T cd05288 263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR 301 (329)
T ss_pred HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc
Confidence 344889998876544321 2356788899999988643
No 108
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.97 E-value=1.3e-29 Score=237.88 Aligned_cols=282 Identities=16% Similarity=0.171 Sum_probs=218.8
Q ss_pred eeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++.++|. .+++++.|.|.|+++||+|||.++++|++|...+.+... ...+|.++|||++|+|++ +++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998874 388999999999999999999999999999988776542 134578899999999998 7778899
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..... .| .+..|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~--------------~~-----------------------------~~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG--------------VG-----------------------------ERHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc--------------CC-----------------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence 99999864210 00 001248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhh--hhcCCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072 168 APLDKVCILSCGVSTGLGATL--NVAKPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~--~~~~~~-~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~ 243 (361)
+++++++.+++++.+++.++. +..... +|++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999989999987643 223444 6789999998 9999999999999999 7899889999999999999999
Q ss_pred EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 322 (361)
Q Consensus 244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~ 322 (361)
++++.+ ....++.+..+++|.++|++++ ..+..++..++.+ |+++.+|.... .....++..+ .+++++.+..
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence 888754 2234555555578999999997 5677888899987 99999997532 2222333334 5899999876
Q ss_pred ecCCCc---CCcHHHHHHHHHcCCcc
Q 018072 323 FGNYKP---RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 323 ~~~~~~---~~~~~~~~~~~~~~~l~ 345 (361)
...... .+.++.+.+++.++.++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPALLE 293 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcCCcc
Confidence 433211 22345566677777664
No 109
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.97 E-value=1.6e-29 Score=236.08 Aligned_cols=283 Identities=28% Similarity=0.358 Sum_probs=227.3
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
||++++..++.+ +.+.++|.|.+.+++++||+.++++|++|+....+... ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888876543 88889999999999999999999999999988776543 245688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..+.. .. ...|++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~--------------------------~~------------------~~~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG--------------------------WG------------------RRQGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc--------------------------cC------------------CCCcceeeEEEecHHHcEeCCCC
Confidence 99999865310 00 01248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
++.++++.+++++.+||+++.+...+.+|++|+|+|+ |.+|++++++++..|. +|+++++++++.+.+.++|++.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877789999999999997 9999999999999998 8999999999999999999988887
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~ 324 (361)
....+ +.+.+..+..+ ++|++++++++ ......++++++. |+++.+|..... ..++... +.++.++.+...+
T Consensus 196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLR--GTIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCCcC--HHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCc--CCCChhHHHhcCceEEeeehh
Confidence 66544 66677777665 89999999998 5678889999998 999999875422 2233333 3477788776543
Q ss_pred CCCcCC----cHHHHHHHHHcCCcc
Q 018072 325 NYKPRT----DLPSVVDMYMNKVIR 345 (361)
Q Consensus 325 ~~~~~~----~~~~~~~~~~~~~l~ 345 (361)
.. .+. .++.+.+++.++.++
T Consensus 270 ~~-~~~~~~~~~~~~~~~~~~~~i~ 293 (325)
T cd08253 270 TA-TPEERAAAAEAIAAGLADGALR 293 (325)
T ss_pred hc-CHHHHHHHHHHHHHHHHCCCcc
Confidence 32 122 234555667777654
No 110
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=2.4e-29 Score=234.18 Aligned_cols=279 Identities=26% Similarity=0.325 Sum_probs=225.9
Q ss_pred eEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 89 (361)
Q Consensus 12 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G 89 (361)
||+.+..++.+ +.+.+.+.|.+.+++++|||.++++|++|+....+..+. .+|.++|||++|+|+.+|+++..+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 56776666553 667777777789999999999999999999987765432 457789999999999999999999999
Q ss_pred CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072 90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 169 (361)
Q Consensus 90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~ 169 (361)
|+|+... ..|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------------------------PPGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------------------------CCCceeEEEEecHHHceeCCCCCC
Confidence 9998431 013799999999999999999999
Q ss_pred hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~ 248 (361)
..+++.++....++|+++.+..++.+|++|+|+|+ |++|++++++|+.+|+ .|++++.++++.+.++++|++.+++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999998899999999877888999999999996 9999999999999999 899999999999999999998888765
Q ss_pred CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCC
Q 018072 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY 326 (361)
Q Consensus 249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~ 326 (361)
..+ +.+.+..++.+ ++|++++++++ ..+..++++++++ |+++.+|..... ...+++..+ .+++++.+......
T Consensus 190 ~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 DED--FVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred chh--HHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence 544 67777777766 89999999998 6888999999998 999999875532 222333334 47888876543332
Q ss_pred C-cC----CcHHHHHHHHHcCCccc
Q 018072 327 K-PR----TDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 327 ~-~~----~~~~~~~~~~~~~~l~~ 346 (361)
. .+ +.+.+++++++++.+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~ 289 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKV 289 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcC
Confidence 1 11 22356778888887753
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.2e-29 Score=237.48 Aligned_cols=284 Identities=24% Similarity=0.291 Sum_probs=222.1
Q ss_pred eeEEEeecCC--CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 11 m~a~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
|||+++.+++ +.++++++|.|++.+++++|||.++++|++|+....+.......|.++|||++|+|+.+|+++..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999998 34999999999999999999999999999999887665433334778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|+..+.. ...|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~----------------------------------------------~~~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL----------------------------------------------ARGGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC----------------------------------------------CCCccceeEEEeCHHHeEECCCCC
Confidence 9999864211 012489999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
+..+++.+.+++.++|+++.+...+++|++|+|+|+ |.+|++++++|+..|+ +|+.+. ++++.+.+.++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999878888999999999998 8999999999999999 777775 6778888888999888876
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce-eecChhhhccccEEEEeeecC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGN 325 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~~l~g~~~~~ 325 (361)
...+ +.+.++.+..+ ++|++++++++. ....+++++++. |+++.+|....... ..+.....++++.+.+.....
T Consensus 193 ~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd08271 193 NDED--VCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHG 268 (325)
T ss_pred CCcc--HHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCcchhHHhhcceEEEEEeccccccc
Confidence 5544 66677777665 899999999984 556789999998 99999875442211 111111112444444332211
Q ss_pred C-----CcCCcHHHHHHHHHcCCccc
Q 018072 326 Y-----KPRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 326 ~-----~~~~~~~~~~~~~~~~~l~~ 346 (361)
. ...+.+.++++++.++.++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~i~~ 294 (325)
T cd08271 269 DPAAWQDLRYAGEELLELLAAGKLEP 294 (325)
T ss_pred chhhHHHHHHHHHHHHHHHHCCCeee
Confidence 1 11223467788888887753
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.4e-29 Score=238.11 Aligned_cols=276 Identities=23% Similarity=0.308 Sum_probs=216.5
Q ss_pred eEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 12 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
||+++...+.+ +++++.+.|.|.++||+|||.++++|++|+.++.+..+. ..+|.++|||++|+|+++|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888887754 888999999999999999999999999999988775532 356889999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|+.... .|+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCCC
Confidence 999985421 1379999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~ 247 (361)
+.++++.++.++.+||+++.+...+++|++|+|+|+ |++|++++++|+..|+ +|+.+.. +++.++++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999999877788999999999997 9999999999999999 7888877 88899999999754 343
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC--hh-----------hhc-
Q 018072 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK--PI-----------NVL- 313 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~~-----------~~~- 313 (361)
...+ +.+. ...++++|+++|++++. .+..++++++++ |+++.+|.........+. +. ...
T Consensus 190 ~~~~--~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd08273 190 RTKD--WLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT 263 (331)
T ss_pred CCcc--hhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence 3332 3333 23334899999999985 488999999998 999999876533222111 10 111
Q ss_pred -cccEEEEeeecCCC----cCCcHHHHHHHHHcCCcc
Q 018072 314 -NERTLKGTFFGNYK----PRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 314 -~~~~l~g~~~~~~~----~~~~~~~~~~~~~~~~l~ 345 (361)
++.++.+....... ..+.+.+++++++++.++
T Consensus 264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~ 300 (331)
T cd08273 264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR 300 (331)
T ss_pred cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc
Confidence 33344333321110 134667888999998875
No 113
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=7.7e-29 Score=231.90 Aligned_cols=280 Identities=25% Similarity=0.332 Sum_probs=225.3
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+++.+++.+ +++++.+.|.+.+++|+|||.++++|++|+.+..+... ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 799999988765 77888888888999999999999999999988766443 233578899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+.... |.. ...|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~------------------~~~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLG------------------GLQGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcC------------------CCCCceeEEEEecHHHcccCCCC
Confidence 9999985421 000 01248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++.+++.++.++.+||+++.+..++++|++++|+|+ |++|++++++|+..|. +|+.+.++ ++.++++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999899999998878889999999999986 9999999999999999 78888888 8899999999988776
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 325 (361)
... . +.+.+..++.+ ++|+++|++++ .....+++++++. |+++.+|... ...+... ..+++++.+.....
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFTLL 265 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEccc
Confidence 543 2 56677777766 89999999998 5788899999997 9999998653 2222222 24778877766432
Q ss_pred --C--C----cCCcHHHHHHHHHcCCcc
Q 018072 326 --Y--K----PRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 326 --~--~----~~~~~~~~~~~~~~~~l~ 345 (361)
. . ..+.++.+++++.++.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 293 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLR 293 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCcc
Confidence 1 0 123567788888888765
No 114
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.97 E-value=1.1e-28 Score=234.50 Aligned_cols=240 Identities=23% Similarity=0.333 Sum_probs=193.4
Q ss_pred eEEEeecCCCCeEEEEeecCCC---CCCeEEEEEeEEecCccchhccccCCCCCC-CCcccccceeEEEEEeCCCCC-CC
Q 018072 12 KAAVAWEAGKPLIIQDVEVAPP---QAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVS-DL 86 (361)
Q Consensus 12 ~a~~~~~~~~~~~~~~~~~p~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~V~~~G~~v~-~~ 86 (361)
|++++.+++.++++++++.|.| ++++|+|||.++++|++|+..+.+...... .|.++|||++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888887777776 889999999999999999987654222122 377899999999999999998 89
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc----ceE
Q 018072 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CVA 162 (361)
Q Consensus 87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~----~~~ 162 (361)
++||+|+......| + ..|+|++|++++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~-----------------------~---------------------~~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY-----------------------G---------------------GQGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC-----------------------C---------------------CCceeeEEEEEccccccceeE
Confidence 99999985422110 0 12489999999987 799
Q ss_pred ECCCCCChhhhhccccchhhhhhhhhhhc-CCCCCCEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc
Q 018072 163 KINPLAPLDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF 239 (361)
Q Consensus 163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~-~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~ 239 (361)
++|+++++.+++.++.++.|||+++.+.. .+++|++|+|+|+ |.+|++++|+|+++|. +.|+.+.+ +++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence 99999999999999999999999976666 7999999999988 7999999999999854 36777754 5556688889
Q ss_pred CCCEEEcCCCCCc--cHHHHHHHHc-CCCccEEEEccCChHHHHHHHHHhc---CCCcEEEEEc
Q 018072 240 GVTDFVNTSEHDR--PIQEVIAEMT-NGGVDRSVECTGNIDNMISAFECVH---DGWGVAVLVG 297 (361)
Q Consensus 240 G~~~vv~~~~~~~--~~~~~i~~~~-~~g~Dvvid~~g~~~~~~~~~~~l~---~~~G~iv~~g 297 (361)
|++.+++..+.+. .+.+.++..+ ++++|++||++|+......++++++ ++ |+++.++
T Consensus 197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~ 259 (352)
T cd08247 197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIV 259 (352)
T ss_pred CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEe
Confidence 9999888655331 1344444444 3489999999998678889999999 98 9999774
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=1.1e-28 Score=230.63 Aligned_cols=280 Identities=25% Similarity=0.310 Sum_probs=226.8
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+.+..++.+ +++++.+.|.+.+++++|||.++++|++|+....+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 688888876654 667777777788999999999999999999887664432 34578999999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+.... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALVA-------------------------------------------------GGGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEccC-------------------------------------------------CCcceeEEEecHHHcEeCCCC
Confidence 9999984310 137999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++.+++.++.++.++|+++.+...+++|++++|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998878889999999999997 9999999999999999 8899989999999998899887776
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~ 324 (361)
....+ +.+.+.....+ ++|++++++|+ ..+..++++++++ |+++.+|....... .+++..+ .+++++.+....
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YREED--FVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCchh--HHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence 65443 66677776665 89999999998 5788899999998 99999987542222 4444444 489999988754
Q ss_pred CCCc-------CCcHHHHHHHHHcCCcc
Q 018072 325 NYKP-------RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 325 ~~~~-------~~~~~~~~~~~~~~~l~ 345 (361)
.... ...+.+++++++++.++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 293 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRVR 293 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCccc
Confidence 4211 11235567788887764
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=2.1e-28 Score=228.91 Aligned_cols=285 Identities=27% Similarity=0.363 Sum_probs=225.5
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~ 87 (361)
|||+.+...+.+ +.+.+.+.|.+.+++++|+|.++++|+.|..+..+.... ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 688998876643 777788888889999999999999999999887665432 34577899999999999999999999
Q ss_pred CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072 88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 167 (361)
Q Consensus 88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~ 167 (361)
+||+|+..+... ....|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAAD--------------------------------------------LGQYGTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccc--------------------------------------------cCCCccceEEEEechHhcEeCCCC
Confidence 999998653210 001248999999999999999999
Q ss_pred CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
+++.+++.+++++.++|+++.....+.++++++|+|+ |.+|++++++++..|. +++.++.++++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877888999999999997 9999999999999999 8888889999999998899988887
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hhccccEEEEeeec
Q 018072 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFG 324 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~l~g~~~~ 324 (361)
....+ +.+.+..+..+ ++|++++++++ .....++++++++ |+++.+|.... ....+... .+.+++++.+....
T Consensus 196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDEED--LVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCCcc--HHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecc
Confidence 66544 66667776665 89999999998 6788899999998 99999986553 22223333 24488888877644
Q ss_pred CC-CcCCcH----HHHHHHHHcCCcc
Q 018072 325 NY-KPRTDL----PSVVDMYMNKVIR 345 (361)
Q Consensus 325 ~~-~~~~~~----~~~~~~~~~~~l~ 345 (361)
.. ..++++ ..+.+++.++.+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALK 296 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCc
Confidence 31 112233 3344556566554
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=3.4e-28 Score=225.17 Aligned_cols=264 Identities=26% Similarity=0.348 Sum_probs=211.0
Q ss_pred cCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccC
Q 018072 30 VAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS 108 (361)
Q Consensus 30 ~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~ 108 (361)
.|++.+++++||+.++++|+.|+....+.++. ..+|.++|+|++|+|+++|+++.++++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 57788999999999999999999988775532 3568899999999999999999999999999854210
Q ss_pred CCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhh
Q 018072 109 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188 (361)
Q Consensus 109 ~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~ 188 (361)
..|+|++|+.++.+.++++|+++++++++.++.++.+||+++
T Consensus 72 -------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 124899999999999999999999999999999999999986
Q ss_pred hhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-Cc
Q 018072 189 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 266 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~ 266 (361)
+...+++|++|+|+|+ |.+|++++|+|+.+|. +|+++++++++.+.++++|++.+++....+ +.+.+..++++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCc
Confidence 5788999999999976 9999999999999999 899999999999999999999888876654 77777777776 89
Q ss_pred cEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC--Cc----CCcHHHHHHHHH
Q 018072 267 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY--KP----RTDLPSVVDMYM 340 (361)
Q Consensus 267 Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~--~~----~~~~~~~~~~~~ 340 (361)
|+++|++++ .....++++++++ |+++.+|.........+....+.++..+....+... .. .+.+.++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 7888999999998 999999865422222233222334444433222111 01 134567788888
Q ss_pred cCCccc
Q 018072 341 NKVIRF 346 (361)
Q Consensus 341 ~~~l~~ 346 (361)
++.++.
T Consensus 269 ~g~~~~ 274 (303)
T cd08251 269 EGELRP 274 (303)
T ss_pred CCCccC
Confidence 887753
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.97 E-value=3.4e-28 Score=225.61 Aligned_cols=272 Identities=24% Similarity=0.336 Sum_probs=217.9
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD 85 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~ 85 (361)
|||+++..++.. +++++.+.|.++++||+|||.++++|++|+..+.+... ....|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789998887753 56777888888999999999999999999988876442 2345889999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072 86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 165 (361)
Q Consensus 86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP 165 (361)
+++||+|+..+.. ...|+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~----------------------------------------------~~~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF----------------------------------------------TRGGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC----------------------------------------------CCCCcceeEEEecHHHhccCC
Confidence 9999999865310 001489999999999999999
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v 244 (361)
+++++.+++.+++.+.++|+++.+...+.+|++|+|+|+ |.+|++++++++..|. +|+++..++ +.+.++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999899999998777677999999999997 9999999999999999 788887777 8888888998888
Q ss_pred EcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeee
Q 018072 245 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF 323 (361)
Q Consensus 245 v~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~ 323 (361)
++....+ +.+ ...+ ++|+++|++++ .....++++++++ |+++.+|....... ..+.+++++.....
T Consensus 193 ~~~~~~~--~~~----~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~ 259 (309)
T cd05289 193 IDYTKGD--FER----AAAPGGVDAVLDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV 259 (309)
T ss_pred EeCCCCc--hhh----ccCCCCceEEEECCch-HHHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence 8766544 332 2333 89999999998 4788999999998 99999987542111 22235666665543
Q ss_pred cCCCcCCcHHHHHHHHHcCCcc
Q 018072 324 GNYKPRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~l~ 345 (361)
... ...+++++++++++.++
T Consensus 260 ~~~--~~~~~~~~~~~~~~~~~ 279 (309)
T cd05289 260 EPD--GEQLAELAELVEAGKLR 279 (309)
T ss_pred ccc--HHHHHHHHHHHHCCCEE
Confidence 221 46788899999888764
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=1.1e-27 Score=223.57 Aligned_cols=279 Identities=30% Similarity=0.492 Sum_probs=225.7
Q ss_pred eeEEEeecCCCC--eEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018072 11 CKAAVAWEAGKP--LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL 86 (361)
Q Consensus 11 m~a~~~~~~~~~--~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~ 86 (361)
|+|+++..++.+ +++.+.+ |.+. +++++||+.++++|++|+..+.+.... ...|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 689998754433 7777777 7666 499999999999999999887765432 3346689999999999999999999
Q ss_pred CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072 87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166 (361)
Q Consensus 87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~ 166 (361)
++||+|+..+. .|++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCCC
Confidence 99999985420 13799999999999999999
Q ss_pred CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072 167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245 (361)
Q Consensus 167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv 245 (361)
+++..+++.+..++.+||+++.+...++++++|+|+|+ |++|++++++|+..|. .|+.++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999988888899999998776788999999999998 9999999999999999 799999999999999999998887
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhccccEEEEeee
Q 018072 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFF 323 (361)
Q Consensus 246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~l~g~~~ 323 (361)
+....+ +.+.+...+++ ++|++++++|+ ..+..+++++++. |+++.+|....... .+.. ..+.+++++.+...
T Consensus 190 ~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRDPD--LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCCcc--HHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 766544 67777777766 89999999998 7888999999998 99999987542221 1222 22348899988775
Q ss_pred cCCCc------CCcHHHHHHHHHcCCcc
Q 018072 324 GNYKP------RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 324 ~~~~~------~~~~~~~~~~~~~~~l~ 345 (361)
..+.. .+.++++++++.++.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGKIR 292 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence 54321 23567788888888764
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=2.2e-27 Score=223.30 Aligned_cols=280 Identities=23% Similarity=0.331 Sum_probs=218.9
Q ss_pred eEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072 12 KAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 88 (361)
Q Consensus 12 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~ 88 (361)
||+++...+. .+.+.+.+.|.|.+++|+|||.++++|++|..++.+.... +..|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666665554 2777788888889999999999999999999988775432 345778999999999999999999999
Q ss_pred CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072 89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168 (361)
Q Consensus 89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~ 168 (361)
||+|+.... .|+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR-------------------------------------------------FGGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC-------------------------------------------------CCeeeeEEEecHHHeEECCCCC
Confidence 999985421 1379999999999999999999
Q ss_pred ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVN 246 (361)
Q Consensus 169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~ 246 (361)
++.+++.+++++.++|+++.+...+++|++|+|+|+ |.+|++++++|+.. +. .++.. .++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999999999999999877888999999999998 99999999999998 33 33322 3456788888899988887
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce--e-------------ecC-hh
Q 018072 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F-------------MTK-PI 310 (361)
Q Consensus 247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~-------------~~~-~~ 310 (361)
....+ +.+.++..+++++|+++|++|+ .....++++++++ |+++.+|....... . ... ..
T Consensus 190 ~~~~~--~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 190 YRTQD--YVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred CCCCc--HHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 76554 7777777765689999999998 5778999999998 99999986542211 1 111 12
Q ss_pred hhccccEEEEeeecCCCc-C----CcHHHHHHHHHcCCccc
Q 018072 311 NVLNERTLKGTFFGNYKP-R----TDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 311 ~~~~~~~l~g~~~~~~~~-~----~~~~~~~~~~~~~~l~~ 346 (361)
.+.+++++.++....... . ..+.++++++.++.+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP 306 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence 234888988876542211 1 23567888888887653
No 121
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.96 E-value=2.7e-27 Score=217.19 Aligned_cols=253 Identities=23% Similarity=0.291 Sum_probs=205.9
Q ss_pred CeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCc
Q 018072 36 MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 115 (361)
Q Consensus 36 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~ 115 (361)
+|++|||.++++|++|+....+.. ..+|.++|||++|+|+++|+++..+++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887643 34578999999999999999999999999998541
Q ss_pred ccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCC
Q 018072 116 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 195 (361)
Q Consensus 116 ~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~ 195 (361)
.|+|+||+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1389999999999999999999999999998899999999877788999
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC--CCEEEcCCCCCccHHHHHHHHcCC-CccEEEE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 271 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G--~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid 271 (361)
|++|+|+|+ |++|++++|+|+..|+ +|+++..++++.+.++++| ++.+++....+ +.+.++.++.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEe
Confidence 999999975 9999999999999999 8999989999999998888 67777765443 67777777766 8999999
Q ss_pred ccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC--c----CCcHHHHHHHHHcCCcc
Q 018072 272 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK--P----RTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~--~----~~~~~~~~~~~~~~~l~ 345 (361)
++|+. .+..++++++++ |+++.+|.........+....+.+++++......... . .+.+.++++++++++++
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 99985 889999999998 9999998765332222333333356666655432211 1 23467788888888775
No 122
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=6.1e-27 Score=218.65 Aligned_cols=266 Identities=24% Similarity=0.307 Sum_probs=203.5
Q ss_pred EEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCC
Q 018072 24 IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC 100 (361)
Q Consensus 24 ~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c 100 (361)
++++.+.|.|.++||+||++++++|++|+..+.|... ....|..+|||++|+|+++|+++..+++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 7788899999999999999999999999988776442 12346789999999999999999999999999854211
Q ss_pred CCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccch
Q 018072 101 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180 (361)
Q Consensus 101 ~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~ 180 (361)
...|+|++|+.++.+.++++|++++.++++.+++++
T Consensus 93 --------------------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 --------------------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred --------------------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 001389999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHH
Q 018072 181 STGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 259 (361)
Q Consensus 181 ~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~ 259 (361)
.+||+++.+...+++|++|+|+|+ |++|++++++|+..|+ +|++++.+ ++.+.++++|++++++....+ +. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---h
Confidence 999999777777999999999997 9999999999999999 88888765 888889999998888765544 32 3
Q ss_pred HHcCC-CccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcCCCCCceeec---ChhhhccccEEEEeeecCCCcCCcHHH
Q 018072 260 EMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPS 334 (361)
Q Consensus 260 ~~~~~-g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~~ 334 (361)
..+.+ ++|++++++++. ......+..++++ |+++.+|.......... ..........+...... ...+.+++
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK--PNAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEec--CCHHHHHH
Confidence 33444 899999999852 2333444448997 99999997653322221 11111222222222211 12567888
Q ss_pred HHHHHHcCCcc
Q 018072 335 VVDMYMNKVIR 345 (361)
Q Consensus 335 ~~~~~~~~~l~ 345 (361)
+++++++++++
T Consensus 279 ~~~~l~~~~~~ 289 (319)
T cd08267 279 LAELVEEGKLK 289 (319)
T ss_pred HHHHHHCCCee
Confidence 99999888765
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.95 E-value=1.2e-26 Score=212.64 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=202.4
Q ss_pred EEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCccccc
Q 018072 40 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 119 (361)
Q Consensus 40 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~ 119 (361)
|||.++++|++|+..+.+..+ .|.++|||++|+|+++|++++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998876543 367899999999999999999999999998431
Q ss_pred CCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEE
Q 018072 120 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 199 (361)
Q Consensus 120 ~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~V 199 (361)
.|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+++|++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 13899999999999999999999999999999999999987778889999999
Q ss_pred EEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC--CEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCC
Q 018072 200 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 275 (361)
Q Consensus 200 lI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~--~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~ 275 (361)
+|+|+ |.+|++++++|+..|+ +|+++++++++.++++++|+ +.++++...+ +.+.+..+..+ ++|+++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999999999999999998 6777766544 67777777765 89999999996
Q ss_pred hHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC-----cCCcHHHHHHHHHcCCccc
Q 018072 276 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 276 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~-----~~~~~~~~~~~~~~~~l~~ 346 (361)
..+..++++++++ |+++.+|.........++...+.+++++.+....... ..+.+.+++++++++++..
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP 259 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC
Confidence 7888999999998 9999998754222222333333467777665432111 1224567788888887754
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=5.8e-25 Score=193.83 Aligned_cols=264 Identities=20% Similarity=0.244 Sum_probs=203.5
Q ss_pred EEEeecC-CCCCCeEEEEEeEEecCccchhccccCCCC-CCCCccccc----ceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 018072 25 IQDVEVA-PPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGH----EAAGVVESVGEGVSDLEVGDHVLPVFTG 98 (361)
Q Consensus 25 ~~~~~~p-~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~----e~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 98 (361)
.++.+++ ++++++||||.++-+.++..+..++.-.+. .-.|+.+|- .++|+|++ |+..+|++||.|.
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~----- 98 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVW----- 98 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEE-----
Confidence 3444444 458899999999999998776655432221 112444443 67899999 5668899999997
Q ss_pred CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCC--CCChhh-h
Q 018072 99 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINP--LAPLDK-V 173 (361)
Q Consensus 99 ~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~--~~~~~~-a 173 (361)
|+. +|.||.+++.+ ..++||. +.++.. .
T Consensus 99 -------------------------g~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~yl 131 (343)
T KOG1196|consen 99 -------------------------GIV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYL 131 (343)
T ss_pred -------------------------Eec----------------------cceEEEEecCcchhcccCCCCCccCHhhhh
Confidence 433 79999999764 3555543 333322 3
Q ss_pred hccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCC
Q 018072 174 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHD 251 (361)
Q Consensus 174 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~ 251 (361)
.++..+..|||..+++...++.|++|+|-|| |.+|+++.|+|+.+|. .|+++..++||..+++. +|.+..+||+++.
T Consensus 132 g~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~ 210 (343)
T KOG1196|consen 132 GLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES 210 (343)
T ss_pred hccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCcc
Confidence 3466689999999999999999999999987 9999999999999999 99999999999999875 7999999999873
Q ss_pred ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce---eecC--hhhhccccEEEEeeecCC
Q 018072 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV---FMTK--PINVLNERTLKGTFFGNY 326 (361)
Q Consensus 252 ~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~---~~~~--~~~~~~~~~l~g~~~~~~ 326 (361)
+..+.++...++|+|+.||++|+ ..+++.+..|+.+ ||+++||..++... ..+. ...+.|++++.|+....+
T Consensus 211 -~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 211 -DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred -CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence 28889999888899999999999 8999999999998 99999998764322 1111 122339999999876665
Q ss_pred Cc--CCcHHHHHHHHHcCCccc
Q 018072 327 KP--RTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 327 ~~--~~~~~~~~~~~~~~~l~~ 346 (361)
.+ .+-++.+..++++|||..
T Consensus 288 ~d~~~k~ld~l~~~ikegKI~y 309 (343)
T KOG1196|consen 288 LDKYPKFLDFLLPYIKEGKITY 309 (343)
T ss_pred hhhhHHHHHHHHHHHhcCceEE
Confidence 32 344577889999999964
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.93 E-value=6.9e-24 Score=194.72 Aligned_cols=217 Identities=26% Similarity=0.371 Sum_probs=174.9
Q ss_pred CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCcc
Q 018072 62 PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV 141 (361)
Q Consensus 62 ~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~ 141 (361)
.++|.++|||++|+|+++|++++.+++||+|+..
T Consensus 18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------- 51 (277)
T cd08255 18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---------------------------------------------- 51 (277)
T ss_pred CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----------------------------------------------
Confidence 3478999999999999999999999999999843
Q ss_pred ccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 018072 142 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS 221 (361)
Q Consensus 142 ~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~ 221 (361)
+.|++|+.++.+.++++|+++++++++.+ +++.+||+++ ...++++|++++|+|+|.+|++++++|+.+|..
T Consensus 52 ------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~ 123 (277)
T cd08255 52 ------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAR 123 (277)
T ss_pred ------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 15899999999999999999999998888 6899999985 578899999999998899999999999999994
Q ss_pred eEEEEcCChhhHHHHHHcC-CCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072 222 RIIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 222 ~Vi~~~~~~~~~~~~~~~G-~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 299 (361)
+|+++++++++.+.++++| ++.+++... ..+.+ ++|++||+++....+..++++++++ |+++.+|..
T Consensus 124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~ 192 (277)
T cd08255 124 EVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY 192 (277)
T ss_pred cEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence 4999999999999999999 444443221 11233 8999999999878889999999998 999999976
Q ss_pred CCCceeecChhhhc-cccEEEEeeecCCC---------cCCcHHHHHHHHHcCCcc
Q 018072 300 SKDAVFMTKPINVL-NERTLKGTFFGNYK---------PRTDLPSVVDMYMNKVIR 345 (361)
Q Consensus 300 ~~~~~~~~~~~~~~-~~~~l~g~~~~~~~---------~~~~~~~~~~~~~~~~l~ 345 (361)
... ..... ..+. +.+++.+....... ..+.+++++++++++++.
T Consensus 193 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 246 (277)
T cd08255 193 GLK-PLLLG-EEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE 246 (277)
T ss_pred CCC-ccccH-HHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc
Confidence 533 22221 2223 66677776543221 125688999999988864
No 126
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=1.1e-23 Score=166.07 Aligned_cols=108 Identities=36% Similarity=0.649 Sum_probs=94.2
Q ss_pred CCeEEEEEeEEecCccchhcccc-CCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCC
Q 018072 35 AMEVRIKIKYTSLCRTDLYFWES-KGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 113 (361)
Q Consensus 35 ~~evlVkv~~~~i~~~D~~~~~g-~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~ 113 (361)
|+||||||+++|||++|++++.+ .....++|.++|||++|+|+++|+++++|++||+|++.+...|+.|+.|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999998 45567899999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072 114 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 164 (361)
Q Consensus 114 c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i 164 (361)
|.+.... |.. . .|+||||+++|+++++|+
T Consensus 81 c~~~~~~---g~~-~------------------~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVL---GLG-L------------------DGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEET---TTS-S------------------TCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEe---EcC-C------------------CCcccCeEEEehHHEEEC
Confidence 9877655 322 2 349999999999999985
No 127
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.89 E-value=6.3e-23 Score=205.47 Aligned_cols=255 Identities=16% Similarity=0.175 Sum_probs=206.4
Q ss_pred eEEEEeecC---CCCCCeEEEEEeEEecCccchhccccCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 018072 23 LIIQDVEVA---PPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF-------PRIFGHEAAGVVESVGEGVSDLEVGDHV 92 (361)
Q Consensus 23 ~~~~~~~~p---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~-------p~~~G~e~~G~V~~~G~~v~~~~~Gd~V 92 (361)
+++.+-|.. +..++.=+.-|-++.+|+.|+.+..|+-+.... ..++|-||+||-. -|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~----------~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDA----------SGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccccC----------CCcEE
Confidence 556665554 236677799999999999999999987654332 4688999988744 49999
Q ss_pred eecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhh
Q 018072 93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 172 (361)
Q Consensus 93 ~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~ 172 (361)
... .+. -++|+.+.++.+++|.+|.+...++
T Consensus 1499 M~m------------------------------vpA-------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGM------------------------------VPA-------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEe------------------------------eeh-------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 833 111 1689999999999999999999999
Q ss_pred hhccccchhhhhhhhhhhcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcC
Q 018072 173 VCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNT 247 (361)
Q Consensus 173 aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~ 247 (361)
|++.|+.+.|+|+|+..+.+.|+|+++||++ +|++|++|+.+|.+.|. +|+.+..++||++++.+. -.+.+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 9999999999999999999999999999995 59999999999999999 999999999999998763 33445555
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 326 (361)
Q Consensus 248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 326 (361)
.+.+ |...+.+.+.| |+|+|+++... +.++++++||+.+ ||+..+|...-..+-++-+..++|+.+++|...-+.
T Consensus 1609 Rdts--FEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RDTS--FEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cccc--HHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 5555 88899999998 99999999977 7889999999999 999999987755666666666779999999875554
Q ss_pred Cc--CCcHHHHHHHHHc
Q 018072 327 KP--RTDLPSVVDMYMN 341 (361)
Q Consensus 327 ~~--~~~~~~~~~~~~~ 341 (361)
.. .+++.++..++++
T Consensus 1685 mege~e~~~ev~~Lv~e 1701 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAE 1701 (2376)
T ss_pred hcCcHHHHHHHHHHHHh
Confidence 32 2345555555443
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.77 E-value=6.3e-18 Score=137.35 Aligned_cols=128 Identities=32% Similarity=0.558 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHH
Q 018072 206 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 284 (361)
Q Consensus 206 ~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~ 284 (361)
++|++++|+|+..|. +|++++++++|+++++++|+++++++.+.+ +.+.+++++++ ++|+||||+|+++.++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence 689999999999995 999999999999999999999999998887 99999999988 99999999998899999999
Q ss_pred HhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHc
Q 018072 285 CVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMN 341 (361)
Q Consensus 285 ~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 341 (361)
+++++ |+++++|... .....++...++ +++++.|++.++ +++++++++++.+
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 99998 9999999987 445555555555 999999998776 5899999998864
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.40 E-value=5.4e-12 Score=123.52 Aligned_cols=148 Identities=18% Similarity=0.190 Sum_probs=108.8
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCC-----------ccHHHHHH
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIA 259 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~-----------~~~~~~i~ 259 (361)
+..++++|+|+|+|++|+++++.|+.+|+ +|+++|.+++|++.++++|++.+ ++..+.+ .++.+...
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35789999999999999999999999999 89999999999999999999854 5543211 12223323
Q ss_pred HH-cC--CCccEEEEccCChH-----HH-HHHHHHhcCCCcEEEEEcCCCCC-ceeecChhhh-c-cccEEEEeeecCCC
Q 018072 260 EM-TN--GGVDRSVECTGNID-----NM-ISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINV-L-NERTLKGTFFGNYK 327 (361)
Q Consensus 260 ~~-~~--~g~Dvvid~~g~~~-----~~-~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~-~-~~~~l~g~~~~~~~ 327 (361)
+. .+ +++|++|+|++.+. .+ +.+++.++++ |+++.+|...+. .+...+...+ . +++++.|.+. .
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~- 315 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L- 315 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C-
Confidence 32 33 37999999999633 54 8999999997 999999985322 2333332333 3 7999998872 2
Q ss_pred cCCcHH-HHHHHHHcCCcc
Q 018072 328 PRTDLP-SVVDMYMNKVIR 345 (361)
Q Consensus 328 ~~~~~~-~~~~~~~~~~l~ 345 (361)
+.++. ++.+++.++.++
T Consensus 316 -P~~~p~~As~lla~~~i~ 333 (509)
T PRK09424 316 -PSRLPTQSSQLYGTNLVN 333 (509)
T ss_pred -chhHHHHHHHHHHhCCcc
Confidence 24565 578888877764
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.24 E-value=2.2e-10 Score=109.65 Aligned_cols=143 Identities=22% Similarity=0.224 Sum_probs=109.2
Q ss_pred hhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072 184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 184 ~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
|.++.+..+ .-+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|++.++.+|++.+. ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT--------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc--------HHHHH----
Confidence 444444434 4789999999999999999999999999 899999999999999999985431 21222
Q ss_pred CCCccEEEEccCChHHHHHH-HHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcCCcHH--HHHHH
Q 018072 263 NGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLP--SVVDM 338 (361)
Q Consensus 263 ~~g~Dvvid~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~--~~~~~ 338 (361)
.++|+||+++|++..+... ++.++++ |+++.+|.. ..+++ ...+. +++++.++..... ..+++ +.+.+
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId--~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEID--VKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccC--HHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2589999999998888876 9999997 999999954 23344 33344 8899988864331 22556 79999
Q ss_pred HHcCCc-ccC
Q 018072 339 YMNKVI-RFS 347 (361)
Q Consensus 339 ~~~~~l-~~~ 347 (361)
+.+|++ ++.
T Consensus 328 La~Grlvnl~ 337 (413)
T cd00401 328 LAEGRLVNLG 337 (413)
T ss_pred hhCcCCCCCc
Confidence 999998 554
No 131
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.65 E-value=3.9e-07 Score=89.37 Aligned_cols=126 Identities=21% Similarity=0.225 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCC-----------CccHHHHHHHH
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-----------DRPIQEVIAEM 261 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~-----------~~~~~~~i~~~ 261 (361)
.++++|+|+|+|.+|++++++|+.+|+ .|++++.++++++.++++|++.+ ++..+. ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999999763 322110 01233333333
Q ss_pred cC---CCccEEEEcc---CChH---HHHHHHHHhcCCCcEEEEEcCCCCCceeec-Chhhhc---cccEEEEee
Q 018072 262 TN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINVL---NERTLKGTF 322 (361)
Q Consensus 262 ~~---~g~Dvvid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~~~~~---~~~~l~g~~ 322 (361)
.. .++|++|+|+ |.+. ..+..++.|+++ +.++.++...+. .+.+ .+...+ .++++.|..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence 32 2799999999 6544 456789999997 999999876544 2222 222222 357877754
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.44 E-value=2.6e-06 Score=82.00 Aligned_cols=104 Identities=26% Similarity=0.272 Sum_probs=80.9
Q ss_pred hhhhhhhhhcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHH
Q 018072 182 TGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 260 (361)
Q Consensus 182 ta~~a~~~~~~~~-~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~ 260 (361)
..|.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.|...+...|++ +.+ +.+.+
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal-- 265 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA-- 265 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH--
Confidence 3455544433544 89999999999999999999999999 899999999888777777764 221 22222
Q ss_pred HcCCCccEEEEccCChHHHH-HHHHHhcCCCcEEEEEcCCC
Q 018072 261 MTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 261 ~~~~g~Dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 300 (361)
.++|+||+++|....+. ..++.++++ +.++.+|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26899999999977776 688889997 9999998765
No 133
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.33 E-value=3.9e-08 Score=95.42 Aligned_cols=160 Identities=18% Similarity=0.238 Sum_probs=107.0
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccC
Q 018072 67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG 146 (361)
Q Consensus 67 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~ 146 (361)
.-|.|+++.+.++++++++ .|+..+.+ ||.|..| ++.|.+.... |.. .+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~---g~~---------l~--------- 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV---GKV---------LE--------- 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc---hHH---------HH---------
Confidence 4678899999999998776 67777777 9999999 6666655444 321 11
Q ss_pred cccceeeEEEeccceEE---C-CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCe
Q 018072 147 TSTFSEYTVVHSGCVAK---I-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 222 (361)
Q Consensus 147 ~G~~ae~v~v~~~~~~~---i-P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~ 222 (361)
+.|++++.++. .+.. | +..+|...+|. ....+..+..++++|+|+|+|.+|..+++.++..|..+
T Consensus 138 -~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 138 -RLFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred -HHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 37999988876 3332 3 22333222211 00123334467899999999999999999999999668
Q ss_pred EEEEcCChhhHH-HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072 223 IIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (361)
Q Consensus 223 Vi~~~~~~~~~~-~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~ 278 (361)
|++++++.++.+ +++++|.. .+... +..+.+ .++|+||++++.+..
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~~----~l~~~l-----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKFE----DLEEYL-----AEADIVISSTGAPHP 253 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeHH----HHHHHH-----hhCCEEEECCCCCCc
Confidence 999999988755 66667763 22211 122222 268999999987664
No 134
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.31 E-value=9.1e-06 Score=77.86 Aligned_cols=102 Identities=28% Similarity=0.320 Sum_probs=79.4
Q ss_pred hhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072 184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 184 ~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
+.++.+..+ .-.|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal---- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA---- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH----
Confidence 344334333 4789999999999999999999999999 899999999888777777763 221 22222
Q ss_pred CCCccEEEEccCChHHHHH-HHHHhcCCCcEEEEEcCCC
Q 018072 263 NGGVDRSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 263 ~~g~Dvvid~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~ 300 (361)
.+.|++|+++|....+.. .+..++++ +.++.+|...
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 257999999999888874 88889997 9999998754
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.21 E-value=3.8e-05 Score=71.13 Aligned_cols=111 Identities=17% Similarity=0.219 Sum_probs=82.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
.+.+|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++.+ . + +.+.+.. .++|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~-------~-~~l~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-H-------L-SELAEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-c-------H-HHHHHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999999888888887532 1 1 1122222 26899999997
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEE
Q 018072 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG 320 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g 320 (361)
..-.-+..++.++++ +.++.++...+...+. ..-.++++..+
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd~~---~a~~~Gv~~~~ 261 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTDFE---YAEKRGIKALL 261 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCcCee---ehhhCCeEEEE
Confidence 643445777889997 9999998776554432 11126666654
No 136
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.20 E-value=2.7e-06 Score=77.92 Aligned_cols=104 Identities=23% Similarity=0.355 Sum_probs=73.7
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCC
Q 018072 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
.+.+++|++||.+|+|. |..+.++++..+. .+|+++|.+++.++.+++. +...+. ....+ +.+ + .+.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--IEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc--hhh-C-CCCCC
Confidence 46688999999999988 8888888888775 3799999999999988763 433221 11111 111 0 12234
Q ss_pred CccEEEEcc------CChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 265 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 265 g~Dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
.||+|+... ..+..+..+.+.|+++ |++++.+...
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~ 186 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVL 186 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeec
Confidence 799998653 3346789999999998 9999887544
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.19 E-value=3.1e-05 Score=70.08 Aligned_cols=132 Identities=20% Similarity=0.179 Sum_probs=84.0
Q ss_pred cceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC
Q 018072 149 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 228 (361)
Q Consensus 149 ~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~ 228 (361)
+|.+|.. +...++.+++++++..+.--. ... ....+. ..++++++||-+|+|. |.+++.+++ .|..+|+++|.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4666644 667788898887765543111 111 111111 1257899999999987 888776554 67757999999
Q ss_pred ChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 229 SSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 229 ~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
++...+.+++. +....+.....+ ..||+|+.+.... ..+..+.+.|+++ |++++.|...
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~~~~------------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~ 216 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLPQGD------------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE 216 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEccCC------------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence 99988887653 321111111110 1589999766542 2456788889998 9999987654
No 138
>PLN02494 adenosylhomocysteinase
Probab=98.16 E-value=2.2e-05 Score=75.98 Aligned_cols=102 Identities=21% Similarity=0.283 Sum_probs=80.1
Q ss_pred hhhhhhhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072 184 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 184 ~~a~~~~~~~-~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
+.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ + ..+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv------~--leEal---- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL------T--LEDVV---- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec------c--HHHHH----
Confidence 4444444343 679999999999999999999999999 89999999988777777777532 1 22222
Q ss_pred CCCccEEEEccCChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072 263 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 263 ~~g~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~ 300 (361)
...|++++++|....+ ...++.|+++ +.++.+|...
T Consensus 308 -~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 308 -SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred -hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 2479999999987664 7899999998 9999999753
No 139
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.12 E-value=1e-05 Score=69.81 Aligned_cols=118 Identities=20% Similarity=0.285 Sum_probs=86.5
Q ss_pred CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCC
Q 018072 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV 241 (361)
Q Consensus 166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~ 241 (361)
..++....-.+..+...|.. .+...+++|++||=+|+|. |+.++-+|+..+ +|+.+++.++-.+.+ +.+|.
T Consensus 45 ~~lpi~~gqtis~P~~vA~m--~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~ 119 (209)
T COG2518 45 RALPIGCGQTISAPHMVARM--LQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGY 119 (209)
T ss_pred CcccCCCCceecCcHHHHHH--HHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCC
Confidence 33444445555556666653 5778999999999999976 999999999988 899999998854444 55888
Q ss_pred CEE-EcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072 242 TDF-VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 242 ~~v-v~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
..+ +...+... .+.+. .||.|+-+.+-+..-+..+++|+++ |+++..
T Consensus 120 ~nV~v~~gDG~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 120 ENVTVRHGDGSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred CceEEEECCccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 543 33333321 22333 8999999999877778999999998 998765
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.10 E-value=1.5e-05 Score=74.43 Aligned_cols=108 Identities=24% Similarity=0.264 Sum_probs=78.9
Q ss_pred cceEECCCCCChhhhhccccchhhhhhhhhhhcCC----CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH-
Q 018072 159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP----ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF- 233 (361)
Q Consensus 159 ~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~----~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~- 233 (361)
+..+++|+.+..+.++... +...+++++ +.+.. -++.+|+|+|+|.+|..+++.++..|..+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 4567778888888777765 667777774 33332 4789999999999999999999988877899999998875
Q ss_pred HHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (361)
Q Consensus 234 ~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~ 278 (361)
++++++|.. +++.. ++.+.+ ..+|+||.+++.+..
T Consensus 217 ~la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence 667778873 33221 122221 248999999998765
No 141
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.08 E-value=5.8e-05 Score=72.14 Aligned_cols=99 Identities=22% Similarity=0.183 Sum_probs=69.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+.+ ++........+ . +.+.+.. ..+|++|+++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~----~-~~l~~~l-~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN----A-YEIEDAV-KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC----H-HHHHHHH-ccCCEEEEcc
Confidence 34569999999999999999999999 89999999988887754 55432222221 1 1222222 2589999997
Q ss_pred C---C--hH-HHHHHHHHhcCCCcEEEEEcCCCC
Q 018072 274 G---N--ID-NMISAFECVHDGWGVAVLVGVPSK 301 (361)
Q Consensus 274 g---~--~~-~~~~~~~~l~~~~G~iv~~g~~~~ 301 (361)
+ . +. .-...++.++++ +.++.++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 3 2 22 136777889997 99999986553
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.03 E-value=4e-06 Score=84.86 Aligned_cols=81 Identities=25% Similarity=0.333 Sum_probs=61.0
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHHcCCCEEEcCCC-
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE- 249 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~---------------------~~~~~~~~~~G~~~vv~~~~- 249 (361)
..++|++|+|+|+|++|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78889853 35677788899987776543
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072 250 HDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (361)
Q Consensus 250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~ 278 (361)
.+... +.+ ..++|+||+++|....
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQLG 235 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCCC
Confidence 22112 111 2369999999997543
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=97.87 E-value=9.5e-05 Score=76.58 Aligned_cols=139 Identities=22% Similarity=0.269 Sum_probs=88.5
Q ss_pred ccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE
Q 018072 148 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 226 (361)
Q Consensus 148 G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~ 226 (361)
-++++|..++...++.+ +..+.+++..... ......+|+++||+|+ |++|...++.+...|+ +|+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~ 452 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA 452 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence 35778888887777776 5555566532110 0122346899999997 9999999999999998 89999
Q ss_pred cCChhhHHHHHH-cCC--C-E--EEcCCCCCccHHHHHHHHc--CCCccEEEEccCC-----------------------
Q 018072 227 DRSSKRFEEAKK-FGV--T-D--FVNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN----------------------- 275 (361)
Q Consensus 227 ~~~~~~~~~~~~-~G~--~-~--vv~~~~~~~~~~~~i~~~~--~~g~Dvvid~~g~----------------------- 275 (361)
++++++.+.+.+ ++. . . ..|..+.+ .+.+.+.... .+++|++|+++|.
T Consensus 453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 453 DLDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred eCCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 999887766543 443 1 1 22333221 2333333322 2379999999982
Q ss_pred --hHHHHHHHHHhcC---CCcEEEEEcCCC
Q 018072 276 --IDNMISAFECVHD---GWGVAVLVGVPS 300 (361)
Q Consensus 276 --~~~~~~~~~~l~~---~~G~iv~~g~~~ 300 (361)
...++.+++.++. + |++++++...
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~~ 560 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence 1123455666665 5 8899988643
No 144
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.85 E-value=0.00018 Score=69.92 Aligned_cols=93 Identities=24% Similarity=0.277 Sum_probs=74.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
.-.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+ + +.+.+ ...|+|+.+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~------~--leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV------T--LEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec------c--HHHHH-----hcCCEEEEC
Confidence 4579999999999999999999999999 89999998887766655665421 1 32222 258999999
Q ss_pred cCChHHHH-HHHHHhcCCCcEEEEEcCCC
Q 018072 273 TGNIDNMI-SAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 273 ~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 300 (361)
+|....+. ..++.|+++ +.++.+|...
T Consensus 317 tGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred CCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 99877775 899999997 9999998764
No 145
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.76 E-value=3.9e-06 Score=67.44 Aligned_cols=91 Identities=16% Similarity=0.292 Sum_probs=54.8
Q ss_pred cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC--ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccc
Q 018072 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE 315 (361)
Q Consensus 239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~ 315 (361)
||+++++||...+ + ...+++|+|||++| .+..+..++++| ++ |+++.++. ....... .+.
T Consensus 1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence 6999999998554 3 23459999999999 655557777888 87 99999984 1111111 123
Q ss_pred cEEEEeeecC-CC---cCCcHHHHHHHHHcCCccc
Q 018072 316 RTLKGTFFGN-YK---PRTDLPSVVDMYMNKVIRF 346 (361)
Q Consensus 316 ~~l~g~~~~~-~~---~~~~~~~~~~~~~~~~l~~ 346 (361)
..+.+.++.+ .. ..+.++++++++++|+|.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~ 98 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKP 98 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS--
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEE
Confidence 3333333322 11 2345999999999999965
No 146
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.74 E-value=0.00011 Score=68.02 Aligned_cols=99 Identities=21% Similarity=0.273 Sum_probs=66.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv 268 (361)
.+++++||-+|+|. |.+++.+++ .|+.+|+++|.++..++.+++. +....+.....+ ......++||+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~------~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY------LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc------cccccCCCceE
Confidence 46789999999988 887776665 5766999999999888777652 222111111110 11122347999
Q ss_pred EEEccCCh---HHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 269 SVECTGNI---DNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 269 vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
|+...... ..+..+.+.|+++ |.+++.|...
T Consensus 229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~ 262 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGILE 262 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcH
Confidence 99865442 3456778899997 9999887643
No 147
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.64 E-value=0.00068 Score=62.52 Aligned_cols=99 Identities=20% Similarity=0.307 Sum_probs=72.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
.|++++|+|.|.+|...+..++..|+ +|+++++++++.+.+.++|...+ . +. .+.+.. .++|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence 47899999999999999999999998 99999999988877777775422 1 11 122222 26899999997
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcCCCCCcee
Q 018072 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~ 305 (361)
..-.-...++.++++ ..++.++..++...+
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~tdf 248 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGGTDF 248 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCCCCH
Confidence 532224566778886 888888876544443
No 148
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.57 E-value=0.00039 Score=61.36 Aligned_cols=79 Identities=20% Similarity=0.366 Sum_probs=60.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCC----CEEEcCCCCCccHHHHHHHHcCC--Cc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV----TDFVNTSEHDRPIQEVIAEMTNG--GV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~----~~vv~~~~~~~~~~~~i~~~~~~--g~ 266 (361)
.++.++|+|+ +++|.+.++.....|+ +|+.+.|.+++++.+. +++. ...+|..+.+ ++.+.+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence 3478899998 8999999999999999 9999999999988875 4773 2234443332 355666666655 69
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|+.+++.|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999884
No 149
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.54 E-value=0.00022 Score=69.55 Aligned_cols=161 Identities=20% Similarity=0.214 Sum_probs=97.4
Q ss_pred ccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccC
Q 018072 67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG 146 (361)
Q Consensus 67 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~ 146 (361)
.-|||+++.+.++++++.+.-+|+ +.+ |+.|. +.+..|...... |.. .
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk----~a~~~a~~~g~~---g~~---------l---------- 138 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVK----DAYALAQEAGTV---GTI---------L---------- 138 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHH----HHHHHHHHcCCc---hHH---------H----------
Confidence 469999999999999987744444 433 44443 223333332222 111 1
Q ss_pred cccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhc---CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeE
Q 018072 147 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRI 223 (361)
Q Consensus 147 ~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~---~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~V 223 (361)
.+.|++.+.++ ..+..+.+. ...+..++++++.... +-.++.+|+|+|+|.+|.++++.++..|+.+|
T Consensus 139 ~~lf~~a~~~~--------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 139 NRLFQKAFSVA--------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred HHHHHHHHHHH--------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 12565544443 222222221 1224556666642221 12678999999999999999999999998789
Q ss_pred EEEcCChhhHH-HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072 224 IGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (361)
Q Consensus 224 i~~~~~~~~~~-~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~ 278 (361)
++++++.++.+ +++++|.+ +++. . .+.... .++|+||++++.+..
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~-------~-~~~~~l-~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPL-------D-ELPEAL-AEADIVISSTGAPHP 255 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeH-------H-HHHHHh-ccCCEEEECCCCCCc
Confidence 99999988865 66777753 2221 1 111111 268999999997654
No 150
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.51 E-value=0.0012 Score=57.56 Aligned_cols=102 Identities=23% Similarity=0.425 Sum_probs=71.2
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----HcCC-CEEEcCCCCCccHHHHHHHHc
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGV-TDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~----~~G~-~~vv~~~~~~~~~~~~i~~~~ 262 (361)
...++.++++|+-+|+|. |.+++++|+..+. .+|+++|.+++.++.++ .+|. +.+.... .+ ..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d--~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GE--APEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ec--hhhhHhhc-
Confidence 456789999999999988 9999999887653 48999999999888764 3562 3322211 11 22222222
Q ss_pred CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEE
Q 018072 263 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 263 ~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~ 296 (361)
.+.+|.||...+. ...++.+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2479999986543 34677888899997 998753
No 151
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.49 E-value=0.00043 Score=56.39 Aligned_cols=74 Identities=26% Similarity=0.361 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCC--EEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV 270 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~--~vv~~~~~~~~~~~~i~~~~~~g~Dvvi 270 (361)
-.+.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+. .++.. ..+.+.+ +.+.+ ..+|+||
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence 35789999999999999999999999988999999998877764 45332 2333322 21111 2589999
Q ss_pred EccCCh
Q 018072 271 ECTGNI 276 (361)
Q Consensus 271 d~~g~~ 276 (361)
++++.+
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 998874
No 152
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.49 E-value=0.00079 Score=64.71 Aligned_cols=109 Identities=22% Similarity=0.234 Sum_probs=76.1
Q ss_pred chhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHH
Q 018072 179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 258 (361)
Q Consensus 179 ~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i 258 (361)
+....+..+.+..++++|++||-+|+| .|.++..+++..|. +|++++.+++.++.+++......+.....+ +.
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~~--- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--YR--- 223 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--hh---
Confidence 444555556677889999999999986 47788888888888 999999999999998774322112111112 21
Q ss_pred HHHcCCCccEEEEc-----cCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072 259 AEMTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 259 ~~~~~~g~Dvvid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g 297 (361)
.+ ++.||.|+.. +|. +..+..+.+.|+++ |++++..
T Consensus 224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 11 3479998743 343 34678888999998 9988764
No 153
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.39 E-value=0.0013 Score=61.50 Aligned_cols=102 Identities=23% Similarity=0.263 Sum_probs=73.4
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.+++ +|.+.+... ..+ ..+....
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD--~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGD--GYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCC--hhhcccc--
Confidence 355678899999999998 49999999998764 379999999987766543 676543322 222 2111111
Q ss_pred CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072 263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 263 ~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
.+.+|+|+.+.+.+......++.|+++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999988767777889999998 997763
No 154
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.37 E-value=0.00024 Score=62.29 Aligned_cols=101 Identities=23% Similarity=0.334 Sum_probs=69.2
Q ss_pred hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHH----HcCCCEE-EcCCCCCccHHHHHHH
Q 018072 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHDRPIQEVIAE 260 (361)
Q Consensus 187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~-~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~~~~~~~i~~ 260 (361)
+.+...+++|++||-+|+|. |+.++.+++..|.. .|+.++++++-.+.++ ++|.+.+ +...+... .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~-------g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE-------G 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG-------T
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh-------c
Confidence 35677899999999999876 88999999888753 6999999987665554 3566532 22222111 1
Q ss_pred HcC-CCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072 261 MTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 261 ~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
+.. +.||.|+-+.+-+..-...+++|+++ |+++..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 112 37999999998877778999999997 998874
No 155
>PRK06182 short chain dehydrogenase; Validated
Probab=97.34 E-value=0.0028 Score=57.85 Aligned_cols=79 Identities=20% Similarity=0.389 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHc--CCCccEEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV 270 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~--~~g~Dvvi 270 (361)
++.+++|+|+ |++|...++.+...|. +|+++++++++++.+.+.+...+ .|..+.+ .+.+.+.... .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence 3578999998 9999999998888898 89999999988876665554432 3333322 2434444332 23799999
Q ss_pred EccCC
Q 018072 271 ECTGN 275 (361)
Q Consensus 271 d~~g~ 275 (361)
+++|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 156
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.32 E-value=0.0035 Score=55.74 Aligned_cols=104 Identities=23% Similarity=0.346 Sum_probs=67.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc---CCCEEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVTDFVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~---G~~~vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
++++|+|+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++ +.-+.+..+-.+ ..+.+.+..... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999999999999999 8999999988776652 22 222223222221 123333322221 368
Q ss_pred cEEEEccCChH-----------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072 267 DRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 267 Dvvid~~g~~~-----------------------~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
|.++++++... .++..++.++++ |++++++...
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 99999887421 134555667776 8999888653
No 157
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.25 E-value=0.0036 Score=53.10 Aligned_cols=104 Identities=22% Similarity=0.361 Sum_probs=72.6
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHHcC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
+...++++|+.++=+|+|. |..++++|+.....+|+++++++++++..+ +||.+.+...... -.+.+..+.
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~- 101 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP- 101 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC-
Confidence 3457889999888889865 667778885555569999999999988864 4887754433322 122322221
Q ss_pred CCccEEEEccCC--hHHHHHHHHHhcCCCcEEEEEcC
Q 018072 264 GGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 264 ~g~Dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
.+|.+|---|. +..++.++..|+++ |++|.--.
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 58999975442 34688999999997 99887644
No 158
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.22 E-value=0.003 Score=54.49 Aligned_cols=111 Identities=17% Similarity=0.211 Sum_probs=75.7
Q ss_pred CCCEEEEEcC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC--ccHHHHHHHHcCCCccE
Q 018072 195 RGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~--g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~--~~~~~~i~~~~~~g~Dv 268 (361)
....|||+|+ |++|.+.+.-....|. .|+++.+.-++...+. ++|... -+|..+++ .++...++..++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4568999975 9999998888888899 9999999888877766 777642 34433322 23455566667779999
Q ss_pred EEEccCChH----------HHH----------------HHHHHhcCCCcEEEEEcCCCCCceeec
Q 018072 269 SVECTGNID----------NMI----------------SAFECVHDGWGVAVLVGVPSKDAVFMT 307 (361)
Q Consensus 269 vid~~g~~~----------~~~----------------~~~~~l~~~~G~iv~~g~~~~~~~~~~ 307 (361)
.++.+|.+= .++ ..-.+++.. |+|+.+|.......+++
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence 999887421 111 112245666 99999987665444443
No 159
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.21 E-value=0.0022 Score=53.38 Aligned_cols=94 Identities=28% Similarity=0.309 Sum_probs=64.3
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
-.-.|.+++|+|=|.+|.-.++.++.+|+ +|++++.++-+.-++.--|.... . ..+.+ ...|++|.
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~-~-------~~~a~-----~~adi~vt 84 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM-T-------LEEAL-----RDADIFVT 84 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----TT-SEEEE
T ss_pred eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec-C-------HHHHH-----hhCCEEEE
Confidence 35678999999999999999999999999 99999999988877777776432 1 22222 25799999
Q ss_pred ccCChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072 272 CTGNIDNM-ISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 272 ~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~ 300 (361)
++|..+.+ ..-++.|+++ ..+..+|...
T Consensus 85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh~d 113 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDG-AILANAGHFD 113 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TT-EEEEESSSST
T ss_pred CCCCccccCHHHHHHhcCC-eEEeccCcCc
Confidence 99986654 4778889986 6666666544
No 160
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.003 Score=57.81 Aligned_cols=78 Identities=18% Similarity=0.323 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHH---cCCCccEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEM---TNGGVDRS 269 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~---~~~g~Dvv 269 (361)
.+.+++|+|+ |++|...++.+...|. +|+++++++++++.+.+.+.+.+ .|..+.+ ++.+.+... ..+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPE-SIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHH-HHHHHHHHHHHHcCCCccEE
Confidence 4678999998 9999999998888898 89999999998887777665433 2333321 233333332 23478999
Q ss_pred EEccC
Q 018072 270 VECTG 274 (361)
Q Consensus 270 id~~g 274 (361)
+++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 161
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.12 E-value=0.0049 Score=54.26 Aligned_cols=101 Identities=26% Similarity=0.336 Sum_probs=70.1
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEE-EcCCCCCccHHHHHHHH
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF-VNTSEHDRPIQEVIAEM 261 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~v-v~~~~~~~~~~~~i~~~ 261 (361)
.+..++++|++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++ +|...+ +...+....+ .
T Consensus 69 ~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~------~ 141 (212)
T PRK13942 69 CELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY------E 141 (212)
T ss_pred HHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC------C
Confidence 4567789999999999876 7777788877653 389999999988777654 454321 1111111001 1
Q ss_pred cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072 262 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 262 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
..+.||+|+-....+...+...+.|+++ |+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 1237999987766667778889999998 998775
No 162
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.12 E-value=0.003 Score=54.24 Aligned_cols=79 Identities=20% Similarity=0.328 Sum_probs=56.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC---EEEcCCCCCccHHHHHHHHcCC--CccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT---DFVNTSEHDRPIQEVIAEMTNG--GVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~---~vv~~~~~~~~~~~~i~~~~~~--g~Dv 268 (361)
.|.+|||+|+ +++|+..++-...+|- +||.+.|++++++.+++...+ .+.|..+.+ ...+.+.++-.. ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~-~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRD-SRRELVEWLKKEYPNLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchh-hHHHHHHHHHhhCCchhe
Confidence 4789999976 8999999888888886 999999999999999875443 344444332 122333333333 6799
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+++++|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998873
No 163
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.11 E-value=0.0054 Score=52.24 Aligned_cols=94 Identities=22% Similarity=0.328 Sum_probs=63.8
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC--
Q 018072 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN-- 275 (361)
Q Consensus 199 VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~-- 275 (361)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+. ..+++ ++..+-.+ . +.+..... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~~d--~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDLFD--P-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence 789998 9999999999999997 99999999998877 34443 33333333 2 23333222 69999999984
Q ss_pred --hHHHHHHHHHhcCCC-cEEEEEcCCC
Q 018072 276 --IDNMISAFECVHDGW-GVAVLVGVPS 300 (361)
Q Consensus 276 --~~~~~~~~~~l~~~~-G~iv~~g~~~ 300 (361)
.......++.++..+ .+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 233555566655441 3777776444
No 164
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.10 E-value=0.0047 Score=54.03 Aligned_cols=103 Identities=18% Similarity=0.201 Sum_probs=68.5
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
.+...++++++||=+|+|. |..++.+++..+ ..+|++++.+++-.+.+++ ++....+.....+ ..+.+ ..
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d--~~~~~--~~ 139 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD--GKRGL--EK 139 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC--cccCC--cc
Confidence 4566788999999999876 777777787764 2389999999987766653 4543111111111 11111 01
Q ss_pred CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072 263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 263 ~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
.+.||+|+-+.......+...+.|+++ |+++..
T Consensus 140 ~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 140 HAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred CCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 237999998776656667888999998 998764
No 165
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.08 E-value=0.01 Score=51.09 Aligned_cols=102 Identities=21% Similarity=0.203 Sum_probs=62.5
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccE
Q 018072 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR 268 (361)
Q Consensus 190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dv 268 (361)
...+++|++||.+|+|+-+.......+..+..+|+++|.++.+ ...++. ++..+..+....+.+....+. ++|+
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCccE
Confidence 3457899999999998755443333333344489999999864 112333 221111111233444444444 8999
Q ss_pred EEEcc-----CC------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072 269 SVECT-----GN------------IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 269 vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~g 297 (361)
|+... |. ...+..+.+.|+++ |+++...
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99632 21 35677889999997 9998864
No 166
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.04 E-value=0.0018 Score=50.42 Aligned_cols=95 Identities=25% Similarity=0.299 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv 269 (361)
||.+||-+|+|. |.+++.+++. .++ +|+++|.+++.++.+++. +...-+.....+ + .. .....++||+|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~-~~-~~~~~~~~D~v 74 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD--A-EF-DPDFLEPFDLV 74 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC--C-HG-GTTTSSCEEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc--c-cc-CcccCCCCCEE
Confidence 688999999976 7888888885 566 999999999988888652 222111111122 1 00 01112279999
Q ss_pred EEcc-CC---h------HHHHHHHHHhcCCCcEEEEE
Q 018072 270 VECT-GN---I------DNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 270 id~~-g~---~------~~~~~~~~~l~~~~G~iv~~ 296 (361)
+... .. . ..++...+.|+++ |+++.-
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 75 ICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 9877 21 1 2377888999997 998753
No 167
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0038 Score=56.98 Aligned_cols=77 Identities=21% Similarity=0.374 Sum_probs=55.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEEEEc
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSVEC 272 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvvid~ 272 (361)
.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+.+ .+.+.+..... +++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEEC
Confidence 47899998 9999999998888898 89999999888877766665433 3443322 24444444322 379999999
Q ss_pred cCC
Q 018072 273 TGN 275 (361)
Q Consensus 273 ~g~ 275 (361)
+|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 983
No 168
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=97.03 E-value=0.025 Score=49.41 Aligned_cols=120 Identities=18% Similarity=0.137 Sum_probs=73.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
.|.+|||+|+|.+|..-++.+...|+ +|++++.+.. .++.+.+.|--..+. .... ... + .++|+||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~---~~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFD---ADI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCC---HHH---h--CCcEEEEECC
Confidence 36799999999999999999999999 8888866542 333333334212221 1111 011 1 3689999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (361)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 325 (361)
+.++.-.......+.. |.++.+-......++.++...-..++++--+..|.
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~ 128 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGA 128 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCC
Confidence 9965655666666666 77776654333445555433222556665454443
No 169
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.02 E-value=0.0059 Score=52.59 Aligned_cols=98 Identities=17% Similarity=0.169 Sum_probs=64.7
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 267 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~D 267 (361)
.++++.+||-+|+|. |..++.+++.....+|+++|.+++.++.+++ .+.+. +.....+ ..+ +. . .+.||
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d--~~~-~~-~-~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGR--AEE-FG-Q-EEKFD 114 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEecc--Hhh-CC-C-CCCcc
Confidence 345689999999865 6666666665544499999999987776643 55543 2222222 211 11 1 33799
Q ss_pred EEEEccCC--hHHHHHHHHHhcCCCcEEEEEc
Q 018072 268 RSVECTGN--IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 268 vvid~~g~--~~~~~~~~~~l~~~~G~iv~~g 297 (361)
+|+-.... +..++.+.+.|+++ |+++.+-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 99975332 35677889999998 9998773
No 170
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.00 E-value=0.0096 Score=59.60 Aligned_cols=48 Identities=23% Similarity=0.171 Sum_probs=40.7
Q ss_pred hhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072 188 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~ 236 (361)
-...+.+.|.+|||+|+ |.+|...++.+...|. +|+++.++.++.+.+
T Consensus 72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 34566789999999998 9999999998888898 899999998877544
No 171
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.98 E-value=0.01 Score=46.83 Aligned_cols=103 Identities=20% Similarity=0.332 Sum_probs=68.6
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
....+.++++|+-+|+|. |..+..+++..+..+|+++|.++...+.+++ ++...+.... .+ ....... ..+
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~~-~~~ 87 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE-GD--APEALED-SLP 87 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe-cc--ccccChh-hcC
Confidence 445667788999999977 8889999988754589999999988877643 4443221111 11 1000111 123
Q ss_pred CccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072 265 GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 265 g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 297 (361)
.+|+|+..... .+.+..+.+.|+++ |++++..
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 79999976533 23678899999998 9988653
No 172
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.93 E-value=0.012 Score=57.94 Aligned_cols=79 Identities=24% Similarity=0.357 Sum_probs=51.1
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCc
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFE-EAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGV 266 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~-~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~ 266 (361)
.++.++||+|+ |++|...++.+...|+ +|+++++.+ ++++ ...+++... ..|..+.+ .+.+.+..... +++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGL 285 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCC
Confidence 35789999988 9999999999989998 888887743 3332 334455533 23433322 23333333222 268
Q ss_pred cEEEEccC
Q 018072 267 DRSVECTG 274 (361)
Q Consensus 267 Dvvid~~g 274 (361)
|++|+++|
T Consensus 286 d~vi~~AG 293 (450)
T PRK08261 286 DIVVHNAG 293 (450)
T ss_pred CEEEECCC
Confidence 99999998
No 173
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.91 E-value=0.01 Score=56.52 Aligned_cols=97 Identities=16% Similarity=0.234 Sum_probs=64.8
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC---CC-EEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---VT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G---~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
.+|||+|+|.+|+.+++.+...+-.+|++.+++.++.+.+.... .+ ..+|..+ .. .+.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d----~~-al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD----VD-ALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC----hH-HHHHHHh-cCCEEEEe
Confidence 47999999999999999988888559999999999999887764 22 2333332 21 3333332 35999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 273 TGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
.+....+...-.+++.+ =.++......
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence 98855554444455543 3455554433
No 174
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.015 Score=51.64 Aligned_cols=80 Identities=23% Similarity=0.336 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCC---CEEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV---TDFVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~---~~vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
.+.+++|+|+ |.+|...++.+...|. +|+++++++++.+.+. ++.. -+.+..+-.+ ..+.+.+..... +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999998 9999999988888898 7999999887765543 3321 1222222121 123333433322 378
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998764
No 175
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.016 Score=51.21 Aligned_cols=78 Identities=22% Similarity=0.315 Sum_probs=49.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCcc
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~----~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~D 267 (361)
+.++||+|+ |.+|...++.+...|+ +|+.+++++++... +...+...+ .|..+. .++.+.+..... +++|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP-QAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH-HHHHHHHHHHHHHhCCcC
Confidence 679999998 9999999998888898 89999997765432 222333222 222221 123333333222 3789
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
+|+++.|.
T Consensus 85 ~vi~~ag~ 92 (239)
T PRK12828 85 ALVNIAGA 92 (239)
T ss_pred EEEECCcc
Confidence 99998874
No 176
>PRK04148 hypothetical protein; Provisional
Probab=96.90 E-value=0.0053 Score=49.52 Aligned_cols=95 Identities=18% Similarity=0.193 Sum_probs=68.2
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC-CCCccHHHHHHHHcCCCccEEE
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS-EHDRPIQEVIAEMTNGGVDRSV 270 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~-~~~~~~~~~i~~~~~~g~Dvvi 270 (361)
..+++.+++++|.| .|...++.+...|. .|+++|.+++..+.+++.+.+.+.+.- +.+.++ -+++|+|.
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liy 82 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIY 82 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEE
Confidence 33456889999999 78755556667898 999999999999999998876655422 222111 13799999
Q ss_pred EccCChHHHHHHHHHhcCCCcEEEEE
Q 018072 271 ECTGNIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 271 d~~g~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
..-..++.....++.-+.-+..++..
T Consensus 83 sirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 99988888888777777652344444
No 177
>PRK12742 oxidoreductase; Provisional
Probab=96.90 E-value=0.026 Score=49.98 Aligned_cols=101 Identities=23% Similarity=0.300 Sum_probs=62.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcCCCccEEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSV 270 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~~g~Dvvi 270 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ ..+..+ ..+.+.+... +++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~-~~D~~~~~~~~~~~~~~--~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAV-QTDSADRDAVIDVVRKS--GALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEE-ecCCCCHHHHHHHHHHh--CCCcEEE
Confidence 3679999998 9999999999888998 7766644 44554443 44565432 222222 1233333221 3689999
Q ss_pred EccCChH----------H---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072 271 ECTGNID----------N---------------MISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 271 d~~g~~~----------~---------------~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+++|... . ...+.+.++.. |+++.++...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 9987421 0 12334456666 8999887644
No 178
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.87 E-value=0.0066 Score=54.89 Aligned_cols=80 Identities=21% Similarity=0.334 Sum_probs=56.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE-EE--cCCCCCccHHHHHHHHcCC
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FV--NTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~-vv--~~~~~~~~~~~~i~~~~~~ 264 (361)
..+.++||+|| +++|...+..+...|. +++.+.|+++|++.+.+ .|... ++ |..+.+ +......++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~-~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE-ALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh-HHHHHHHHHHhc
Confidence 46789999998 8999999998888898 99999999999888743 33332 33 233322 233223333332
Q ss_pred --CccEEEEccCC
Q 018072 265 --GVDRSVECTGN 275 (361)
Q Consensus 265 --g~Dvvid~~g~ 275 (361)
.+|+.++++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 79999999984
No 179
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.85 E-value=0.043 Score=47.85 Aligned_cols=119 Identities=12% Similarity=-0.001 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
.|.+|||+|+|.+|...+..+...|+ .|++++.... .+..+.+.+.-. +.... +.+. .+ .++|+||-++
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~----~~~~--~l--~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE----FEPS--DI--VDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC----CChh--hc--CCceEEEEcC
Confidence 46799999999999999988888897 8888865432 222222222111 11111 1000 01 2689999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (361)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 325 (361)
+.++. ...+...+.. +.++.+...+...++-++...-...+++--+..|.
T Consensus 79 ~d~el-N~~i~~~a~~-~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIsT~G~ 128 (202)
T PRK06718 79 NDPRV-NEQVKEDLPE-NALFNVITDAESGNVVFPSALHRGKLTISVSTDGA 128 (202)
T ss_pred CCHHH-HHHHHHHHHh-CCcEEECCCCccCeEEEeeEEEcCCeEEEEECCCC
Confidence 99554 4444444454 66666644333444544433222556665454443
No 180
>PRK08017 oxidoreductase; Provisional
Probab=96.78 E-value=0.0087 Score=53.80 Aligned_cols=77 Identities=18% Similarity=0.327 Sum_probs=54.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHH---HHHHHcCCCccEEEE
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQE---VIAEMTNGGVDRSVE 271 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~---~i~~~~~~g~Dvvid 271 (361)
++++|+|+ |++|...++.+...|. +|++++++.++.+.+++.+++.+ .|..+.+ .+.+ .+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPE-SVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHH-HHHHHHHHHHHhcCCCCeEEEE
Confidence 47999998 9999999999988898 89999999999888877776543 2332221 1222 222223347899998
Q ss_pred ccCC
Q 018072 272 CTGN 275 (361)
Q Consensus 272 ~~g~ 275 (361)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 181
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.02 Score=51.82 Aligned_cols=79 Identities=25% Similarity=0.320 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCE-E--EcCCCCCccHHHHHHHHcC--CCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~-v--v~~~~~~~~~~~~i~~~~~--~g~D 267 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... . .|..+. .++.+.+..... +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDD-AAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence 4679999988 9999999998888999 899999988765554 3445322 2 222222 123333333222 3689
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99999874
No 182
>PRK14967 putative methyltransferase; Provisional
Probab=96.76 E-value=0.024 Score=50.21 Aligned_cols=99 Identities=23% Similarity=0.165 Sum_probs=66.3
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
....++++++||-+|+|. |..++.+++. +..+|+++|.+++.++.+++ .+....+.. .+ +.+. +.++
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~ 100 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR 100 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence 345678899999999987 8888888875 55589999999988876654 344322211 12 2221 2234
Q ss_pred CccEEEEccCC---------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072 265 GVDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 265 g~Dvvid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~g 297 (361)
.||+|+...+- ...+..+.+.|+++ |+++++-
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 79999986320 11345678899998 9988763
No 183
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.76 E-value=0.0091 Score=52.63 Aligned_cols=102 Identities=20% Similarity=0.257 Sum_probs=68.3
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ +|.+.+.. ...+ ..+.. ..
T Consensus 70 ~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~-~~~d--~~~~~--~~ 143 (215)
T TIGR00080 70 TELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIV-IVGD--GTQGW--EP 143 (215)
T ss_pred HHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEE-EECC--cccCC--cc
Confidence 4566789999999999876 7777777877653 369999999987777653 45432211 1111 11000 01
Q ss_pred CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072 263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 263 ~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
.+.||+|+-....+...+...+.|+++ |+++..
T Consensus 144 ~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 144 LAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred cCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 137999987665556777888999997 998765
No 184
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=96.75 E-value=0.08 Score=49.02 Aligned_cols=139 Identities=12% Similarity=0.104 Sum_probs=85.1
Q ss_pred cceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhc---CCCCCCEEEEEcC-CHHHHHHHHHHH-HcCCCeE
Q 018072 149 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRI 223 (361)
Q Consensus 149 ~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~---~~~~g~~VlI~G~-g~vG~~a~~~a~-~~g~~~V 223 (361)
.|-+|..+..+..+.- .....++.+-| -+.|.|-. .+.. +.-..+.|+|.+| +..++..+..++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4555655554433211 11122233333 55666642 2211 2233467777777 888888888877 5555589
Q ss_pred EEEcCChhhHHHHHHcCC-CEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 224 IGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 224 i~~~~~~~~~~~~~~~G~-~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+++++.. ...+.+++|. +.++.|++- ..+....--+++|..|+.+......+.+...--..+.+|...
T Consensus 166 vglTS~~-N~~Fve~lg~Yd~V~~Yd~i--------~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLTSAR-NVAFVESLGCYDEVLTYDDI--------DSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEecCc-chhhhhccCCceEEeehhhh--------hhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9995554 4568888998 667766542 233334567999999998888888888876413456777655
No 185
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.75 E-value=0.029 Score=51.15 Aligned_cols=109 Identities=25% Similarity=0.313 Sum_probs=76.2
Q ss_pred hhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHH
Q 018072 184 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIA 259 (361)
Q Consensus 184 ~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~ 259 (361)
+..+.+..+++||++||=+|+|- |.+++-.|+..|+ +|++++-+++..+.+++ .|...-+...-.+ + +
T Consensus 61 ~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d--~----r 132 (283)
T COG2230 61 LDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD--Y----R 132 (283)
T ss_pred HHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc--c----c
Confidence 33457889999999999999976 7778888888898 99999999998877754 5665211111111 1 1
Q ss_pred HHcCCCccEEEE-----ccCC---hHHHHHHHHHhcCCCcEEEEEcCCCCC
Q 018072 260 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGVPSKD 302 (361)
Q Consensus 260 ~~~~~g~Dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~~~ 302 (361)
.+. +.||.|+. .+|. ++.+..+-+.|+++ |++.+.......
T Consensus 133 d~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 133 DFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred ccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 111 24777764 4444 34678899999998 999888765544
No 186
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.75 E-value=0.0043 Score=52.48 Aligned_cols=101 Identities=22% Similarity=0.223 Sum_probs=65.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc-CCCC--------------CccHHHHHHH
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH--------------DRPIQEVIAE 260 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~-~~~~--------------~~~~~~~i~~ 260 (361)
..+|+|+|+|.+|..|+.+++.+|+ +|+..+...++++..+..+...+.. +.+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 8999999999999888888765433 1111 0112222222
Q ss_pred HcCCCccEEEEccC--C---hHH-HHHHHHHhcCCCcEEEEEcCC
Q 018072 261 MTNGGVDRSVECTG--N---IDN-MISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 261 ~~~~g~Dvvid~~g--~---~~~-~~~~~~~l~~~~G~iv~~g~~ 299 (361)
... .+|++|.+.- + |.. -+..++.|++. ..++.+...
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 211 4799886431 1 111 24667788886 778887643
No 187
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.011 Score=52.22 Aligned_cols=78 Identities=10% Similarity=0.162 Sum_probs=52.7
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHcCCCccEEEEccC
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
.+++|+|+ |++|...+..+...|. +|+++++++++.+.+++++-...+..+-.+ ..+.+.+..+..+++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899987 9999998888888898 899999998877666554332222222222 12334444443347999999886
Q ss_pred C
Q 018072 275 N 275 (361)
Q Consensus 275 ~ 275 (361)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
No 188
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.74 E-value=0.015 Score=52.99 Aligned_cols=113 Identities=20% Similarity=0.237 Sum_probs=71.4
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEc--CCCCC-ccHHHHHHHHc--
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVN--TSEHD-RPIQEVIAEMT-- 262 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~--~~~~~-~~~~~~i~~~~-- 262 (361)
-.|..|+|+|| +++|...+.-....|+ +++.+.+..++++.+ ++.+... ++. .+-.+ ++..+.+.+..
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 35789999999 8999988877778898 566665666665555 4455443 222 11111 22444443332
Q ss_pred CCCccEEEEccCChH-------------------------HHHHHHHHhcCCC-cEEEEEcCCCCCceeec
Q 018072 263 NGGVDRSVECTGNID-------------------------NMISAFECVHDGW-GVAVLVGVPSKDAVFMT 307 (361)
Q Consensus 263 ~~g~Dvvid~~g~~~-------------------------~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~ 307 (361)
-+++|+.++++|-.. ....++..|++.+ |.|+.++...+...+++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 238999999887421 1246777777654 89999987766555554
No 189
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.74 E-value=0.024 Score=52.10 Aligned_cols=101 Identities=25% Similarity=0.330 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv 268 (361)
.++|.+||=+|+|. |.+++..+ .+|+.+|+++|.++-..+.+++ .+.+......... .......+.||+
T Consensus 160 ~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~-----~~~~~~~~~~Dv 232 (300)
T COG2264 160 LKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFL-----LLEVPENGPFDV 232 (300)
T ss_pred hcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccccc-----chhhcccCcccE
Confidence 57999999999865 66666555 4578799999999987766654 3443211111110 111122247999
Q ss_pred EEEccCCh---HHHHHHHHHhcCCCcEEEEEcCCCC
Q 018072 269 SVECTGNI---DNMISAFECVHDGWGVAVLVGVPSK 301 (361)
Q Consensus 269 vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~~ 301 (361)
|+-+.=-. ...+...+.++++ |++++.|....
T Consensus 233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~~ 267 (300)
T COG2264 233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGILED 267 (300)
T ss_pred EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehHh
Confidence 99765221 2346777889997 99999997663
No 190
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.01 Score=53.42 Aligned_cols=79 Identities=20% Similarity=0.302 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvv 269 (361)
.|.+|+|+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++...+ .|..+.+ .+.+.+....+ +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4789999998 9999999999988998 899999988776554 34544322 2333321 23333333221 368999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
+.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
No 191
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.71 E-value=0.04 Score=46.04 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
.|.+|+|+|+|.+|.--++.+...|+ .|++++ ++..+.+.+++.-... ... +.+. .+ .++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~-~~~----~~~~--dl--~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWK-QKT----FSND--DI--KDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEE-ecc----cChh--cC--CCceEEEECCC
Confidence 46889999999999998888888898 788773 4444444445422221 111 1100 01 26899999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 325 (361)
.++ +...+..++.. +.++..-......++.++...-..++++-=+..|.
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~~d~~~~~~f~~pa~v~~~~l~iaisT~G~ 128 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNVVSDGTESSFHTPGVIRNDEYVVTISTSGK 128 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEECCCCCcCcEEeeeEEEECCeEEEEECCCc
Confidence 854 45555555443 33443332222334444322112456655444443
No 192
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.0088 Score=56.41 Aligned_cols=79 Identities=22% Similarity=0.414 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE---EcCCCCCccHHHHHHHHc--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v---v~~~~~~~~~~~~i~~~~--~~ 264 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++.|.+.. .|..+.+ .+.+.+.... .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDAD-QVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHhcC
Confidence 4679999998 9999999999999999 899999998887644 33565432 2333221 1222222221 24
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999973
No 193
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.034 Score=49.68 Aligned_cols=101 Identities=20% Similarity=0.247 Sum_probs=61.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHH----HHcCCCE-EE--cCCCCCccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~----~~~G~~~-vv--~~~~~~~~~~~~i~~~~~-- 263 (361)
.+.+++|+|+ |++|...+..+...|. +|+++.++.+ +.+.+ +..+... .+ |..+.+ ++.+.+.....
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE-SVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhC
Confidence 3678999998 9999999998888898 7888877643 33222 2233321 22 332221 23333333322
Q ss_pred CCccEEEEccCCh-------------------HHHHHHHHHhcCCCcEEEEEcC
Q 018072 264 GGVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 264 ~g~Dvvid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+++|+++.+.+.. ..++.+.+.+... |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689999888642 1334555555666 88888865
No 194
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.63 E-value=0.013 Score=58.27 Aligned_cols=75 Identities=24% Similarity=0.219 Sum_probs=56.2
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
.+.+|++|+|+|.|..|++++++++..|+ .|+++|.++++.+.++++|+..+ .... ..+.+ ..+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~----~~~~l-----~~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD----AVQQI-----ADYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc----hHhHh-----hcCCEEEE
Confidence 35678999999999999999999999998 89999988777777777887432 2111 11111 24799999
Q ss_pred ccCChH
Q 018072 272 CTGNID 277 (361)
Q Consensus 272 ~~g~~~ 277 (361)
+.|-+.
T Consensus 77 SpGi~~ 82 (488)
T PRK03369 77 SPGFRP 82 (488)
T ss_pred CCCCCC
Confidence 998644
No 195
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.023 Score=53.65 Aligned_cols=79 Identities=19% Similarity=0.281 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE---EcCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v---v~~~~~~~~~~~~i~~~~~--~ 264 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++++.+ ++.|.... .|..+.+ ++.+.+..... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence 4578999998 9999999998888998 899999988776544 23455432 2332221 23333332222 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++|+++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 78999999874
No 196
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.017 Score=51.40 Aligned_cols=77 Identities=26% Similarity=0.462 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEE-EcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
.+.+++|+|+ |++|...++.+...|. +|+.++++.++.+.+.+ .+...+ .|..+.+ .+.+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA-AIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH-HHHHHHHH--hCCCCEEEE
Confidence 4679999998 8999999999999998 89999998877765543 444322 2332211 12222222 136899999
Q ss_pred ccCC
Q 018072 272 CTGN 275 (361)
Q Consensus 272 ~~g~ 275 (361)
++|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9874
No 197
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.62 E-value=0.0055 Score=56.06 Aligned_cols=101 Identities=25% Similarity=0.266 Sum_probs=62.4
Q ss_pred hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHHc
Q 018072 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
+.+++++++|++||-+|+|- |.++..+|+..|+ +|++++.+++..++++ +.|....+.....+ + +++.
T Consensus 54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~----~~~~ 125 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--Y----RDLP 125 (273)
T ss_dssp HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G----GG--
T ss_pred HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--c----cccC
Confidence 46788999999999999973 7777788888898 9999999999888775 35653211111111 1 1111
Q ss_pred CCCccEEEE-----ccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072 263 NGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 263 ~~g~Dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g 297 (361)
+.||.|+. .+|. +..+..+.+.|+|+ |++++-.
T Consensus 126 -~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 126 -GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred -CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 27898875 3443 34578888999998 9987554
No 198
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.60 E-value=0.024 Score=50.52 Aligned_cols=107 Identities=20% Similarity=0.279 Sum_probs=76.0
Q ss_pred hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
+....+.++|++||=+|+|. |-.|..+++..|-..|+++|.++.-++.+++ .|... +.+...+ ++.+- +.
T Consensus 43 ~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d---Ae~LP-f~ 116 (238)
T COG2226 43 LISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD---AENLP-FP 116 (238)
T ss_pred HHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec---hhhCC-CC
Confidence 34556677999999998765 8999999999987799999999998888865 23222 2222221 11111 23
Q ss_pred CCCccEEEEccC------ChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 263 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 263 ~~g~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+..||+|..+.| -+..+....+.|+|+ |+++.+....
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~ 159 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK 159 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence 337899988765 234788999999998 9998887655
No 199
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.58 E-value=0.02 Score=49.94 Aligned_cols=99 Identities=21% Similarity=0.245 Sum_probs=59.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHH----HHHHcCCCEEEcCCCCCc
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFE----EAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~G~~~vv~~~~~~~ 252 (361)
..+|+|+|+|++|...++.+...|..+++.+|.+. .|.+ .++++....-+.......
T Consensus 21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i 100 (202)
T TIGR02356 21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV 100 (202)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC
Confidence 46899999999999999999999998999998772 2222 223344332222111110
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcE-EEEEc
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV-AVLVG 297 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~-iv~~g 297 (361)
..+.+.++. .++|+||+|+.+.+.....-+..... ++ ++..+
T Consensus 101 -~~~~~~~~~-~~~D~Vi~~~d~~~~r~~l~~~~~~~-~ip~i~~~ 143 (202)
T TIGR02356 101 -TAENLELLI-NNVDLVLDCTDNFATRYLINDACVAL-GTPLISAA 143 (202)
T ss_pred -CHHHHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence 011222222 26999999998866544444444444 43 44443
No 200
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.029 Score=50.09 Aligned_cols=80 Identities=25% Similarity=0.259 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
++.+++|+|+ |++|...+..+...|. +|+++++++++.+.+. +.+... ++..+-.+ ..+.+.+..... ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999998888898 8888888887655432 233322 22222222 112222222221 37
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 201
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.56 E-value=0.014 Score=49.89 Aligned_cols=90 Identities=31% Similarity=0.405 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
-.|.+|.|+|.|.+|...++.++.+|. +|++++++..........+... .+ +.+.+.. .|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcch-----hhhhhhhh
Confidence 468999999999999999999999999 9999999988766455555421 11 4444333 68888877
Q ss_pred CC-hHH----HHHHHHHhcCCCcEEEEEcC
Q 018072 274 GN-IDN----MISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 274 g~-~~~----~~~~~~~l~~~~G~iv~~g~ 298 (361)
.. +++ =...++.|+++ ..++.++-
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred ccccccceeeeeeeeeccccc-eEEEeccc
Confidence 63 111 24667788886 77777764
No 202
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.018 Score=50.72 Aligned_cols=77 Identities=16% Similarity=0.302 Sum_probs=53.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.++..+... ..|..+.+ .+.+.+..+.++++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence 36899987 9999999988777898 8999999988877777666532 23333322 2333333333337999999887
Q ss_pred C
Q 018072 275 N 275 (361)
Q Consensus 275 ~ 275 (361)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 203
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.56 E-value=0.036 Score=48.72 Aligned_cols=106 Identities=21% Similarity=0.244 Sum_probs=74.4
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCC-CCccHHHHHHHHc
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSE-HDRPIQEVIAEMT 262 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~-~~~~~~~~i~~~~ 262 (361)
..++.+...+||=+|.+. |+.++.+|..+. -.+++.++.++++.+.+++ .|.+..+..-. .+ ..+.+....
T Consensus 53 ~L~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence 345566778888888643 777778888776 3489999999999888865 67766333222 23 455555544
Q ss_pred CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEcC
Q 018072 263 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 263 ~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
.+.||+||--... +..++.+++.|+++ |.++.=..
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNv 167 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNV 167 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeec
Confidence 4589999976653 45788999999997 88765543
No 204
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.55 E-value=0.033 Score=49.70 Aligned_cols=80 Identities=24% Similarity=0.303 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cC--CCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG--VTD-FVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G--~~~-vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
.+.++||+|+ |++|...++.+...|. +|+++++++++.+.+.+ +. ... .+..+-.+ ..+...+..... +.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3568999998 9999999998888898 79999999877665432 22 211 22112121 123333332211 368
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|.++|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999874
No 205
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.54 E-value=0.011 Score=54.00 Aligned_cols=98 Identities=20% Similarity=0.156 Sum_probs=70.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC-
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG- 274 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g- 274 (361)
..+|.|+|+|.+|.-++.+|..+|+ +|+..+.+.+|++.+..+-..++....+....+.+.+ .++|++|.++=
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v-----~~aDlvIgaVLI 241 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV-----KKADLVIGAVLI 241 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh-----hhccEEEEEEEe
Confidence 3468888999999999999999999 9999999999999998754444322222221233222 25899998752
Q ss_pred -C---hH-HHHHHHHHhcCCCcEEEEEcCCC
Q 018072 275 -N---ID-NMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 275 -~---~~-~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+ |. ..+..++.|+++ +.++.+....
T Consensus 242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 1 11 356778999997 9998886543
No 206
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.53 E-value=0.012 Score=58.28 Aligned_cols=79 Identities=27% Similarity=0.356 Sum_probs=56.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHHcCCCEEEcCCCCCc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~~~~~~~G~~~vv~~~~~~~ 252 (361)
+.+++|+|+|+|+.|+.++..++..|. .|+.++..+ ...++++++|++..++.....
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~- 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR- 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence 468899999999999999999999999 788887664 245677889987665543211
Q ss_pred cHHHHHHHHcCCCccEEEEccCChH
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNID 277 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~ 277 (361)
++ .+..+. .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 01 111121 26999999999754
No 207
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.53 E-value=0.022 Score=43.96 Aligned_cols=94 Identities=21% Similarity=0.244 Sum_probs=60.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
.|.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-..... . +.+. . .++|+|+-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~~---~--~~~~----l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIRR---E--FEED----L-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEES---S---GGG----C-TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHhh---h--HHHH----H-hhheEEEecCC
Confidence 46899999999999999999999998 899987775 2222 11122211 1 2101 1 27999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcCCCCCcee
Q 018072 275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~ 305 (361)
.+..-+...+..+.. |.++.+...+...++
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF 99 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELCDF 99 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence 976666777777766 888888755544443
No 208
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.014 Score=52.87 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EE--EcCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~v--v~~~~~~~~~~~~i~~~~~--~ 264 (361)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ .+.. .+ .|..+.+ .+.+.+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4789999988 8999999998888999 99999998877655432 2322 12 2222221 12223333221 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 78999999873
No 209
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.017 Score=53.53 Aligned_cols=79 Identities=23% Similarity=0.339 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--CEE---EcCCCCCccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDF---VNTSEHDRPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~--~~v---v~~~~~~~~~~~~i~~~~~--~g 265 (361)
.|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++. ... .|..+.+ ++.+.+..... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence 4789999998 9999999999999998 899999998877655 33542 211 2333221 23333333222 37
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|+++|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 210
>PRK00811 spermidine synthase; Provisional
Probab=96.49 E-value=0.019 Score=52.83 Aligned_cols=99 Identities=17% Similarity=0.157 Sum_probs=65.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC------C--CEEEcCCCCCccHHHHHHHHcCCC
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNGG 265 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G------~--~~vv~~~~~~~~~~~~i~~~~~~g 265 (361)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.++++- . +.-+.....| ..+.+.. ..+.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~D--a~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGD--GIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECc--hHHHHhh-CCCc
Confidence 4467999999876 666777777767679999999999988887631 1 1111111122 3334433 3448
Q ss_pred ccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072 266 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 266 ~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 297 (361)
||+|+..... .+.++.+.+.|+++ |.++...
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 9999975422 23467888999998 9988753
No 211
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.48 E-value=0.015 Score=52.60 Aligned_cols=78 Identities=24% Similarity=0.307 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCE-EE--cCCCCCccHHHHHHHHcC--CCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-FV--NTSEHDRPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~-vv--~~~~~~~~~~~~i~~~~~--~g~D 267 (361)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++++.+.+. +... .+ |..+. ....+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSL-DDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence 4689999988 8999999998888998 899999988877766543 3221 12 22221 123333433322 3689
Q ss_pred EEEEccC
Q 018072 268 RSVECTG 274 (361)
Q Consensus 268 vvid~~g 274 (361)
++|++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999986
No 212
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.017 Score=52.00 Aligned_cols=81 Identities=25% Similarity=0.334 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHc--CC
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMT--NG 264 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~--~~ 264 (361)
-.+.+++|+|+ |++|...+..+...|+ +|+++++++++++.+.+ .+.. .++..+-.+ .++.+.+.... .+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 34789999988 9999999999888998 89999999887655433 1221 222222211 12333333322 13
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|++|+++|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999999883
No 213
>PLN02366 spermidine synthase
Probab=96.46 E-value=0.022 Score=53.02 Aligned_cols=100 Identities=22% Similarity=0.153 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-------EEEcCCCCCccHHHHHHHHcCCCc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-------DFVNTSEHDRPIQEVIAEMTNGGV 266 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-------~vv~~~~~~~~~~~~i~~~~~~g~ 266 (361)
...++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.++++-.. .-+.....| ..+.+++..++.|
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~D--a~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGD--GVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEECh--HHHHHhhccCCCC
Confidence 5578999999876 56667778776666899999999988888773211 011111112 3334444334479
Q ss_pred cEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072 267 DRSVECTGN----------IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 267 Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 297 (361)
|+||.-... .+.++.+.+.|+++ |.++..+
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 999875433 23577889999998 9987654
No 214
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.45 E-value=0.0038 Score=57.59 Aligned_cols=96 Identities=24% Similarity=0.325 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHHcCCCcc
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD 267 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~~~~g~D 267 (361)
.++|++||=+|+|. |.+++..++ +|+++|+++|.++...+.+++ .|... +......+ ...+.||
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence 57889999998754 555555444 588899999999987766654 34332 21111111 1125899
Q ss_pred EEEEccCChHH---HHHHHHHhcCCCcEEEEEcCCC
Q 018072 268 RSVECTGNIDN---MISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 268 vvid~~g~~~~---~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+|+-+.-.+-. .....+.++++ |.+++.|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 99977655322 33455678887 9999999766
No 215
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.44 E-value=0.023 Score=53.36 Aligned_cols=81 Identities=20% Similarity=0.211 Sum_probs=53.3
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cC-CC---EEEcCCCCCccHHHHHHHHcC
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VT---DFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G-~~---~vv~~~~~~~~~~~~i~~~~~ 263 (361)
+.|.+++|+|+ +++|...+..+...|+ +|+.+++++++++.+.+ .+ .. ...|..+...+..+.+.+..+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~ 129 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE 129 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc
Confidence 35899999998 8999998887777898 89999999988765432 22 11 123443221123334444434
Q ss_pred C-CccEEEEccCC
Q 018072 264 G-GVDRSVECTGN 275 (361)
Q Consensus 264 ~-g~Dvvid~~g~ 275 (361)
+ .+|++++++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 3 56799998873
No 216
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.063 Score=48.40 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=52.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cC-CC-E--EEcCCCCCccHHHHHHHHc---CCCcc
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT-D--FVNTSEHDRPIQEVIAEMT---NGGVD 267 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G-~~-~--vv~~~~~~~~~~~~i~~~~---~~g~D 267 (361)
.++||+|+ |++|...++.+...|+ +|+.++++.++++.+.+ ++ .. + ..|..+.+ ++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence 47899988 9999999998888898 89999999888776643 32 11 1 23333322 2333333321 34789
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++++++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999875
No 217
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.41 E-value=0.049 Score=50.90 Aligned_cols=96 Identities=15% Similarity=0.156 Sum_probs=60.6
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~ 276 (361)
+|+|+|+ |.+|...+..+...|. +|+++.++.++...+...+++.+. -+-.+ . +.+.... .++|+||++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl~d--~-~~l~~al-~g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDLSL--P-ETLPPSF-KGVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCCCC--H-HHHHHHH-CCCCEEEECCCCC
Confidence 6999998 9999999998888898 899998987776655555654432 11111 1 1222222 2689999987531
Q ss_pred H------------HHHHHHHHhcCCC-cEEEEEcCC
Q 018072 277 D------------NMISAFECVHDGW-GVAVLVGVP 299 (361)
Q Consensus 277 ~------------~~~~~~~~l~~~~-G~iv~~g~~ 299 (361)
. .....++.++..+ .+++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1 1123444454441 378887763
No 218
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.019 Score=51.91 Aligned_cols=81 Identities=26% Similarity=0.372 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcC-C-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCEE--E--cCCCCCccHHHHHHHH
Q 018072 193 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF--V--NTSEHDRPIQEVIAEM 261 (361)
Q Consensus 193 ~~~g~~VlI~G~-g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~v--v--~~~~~~~~~~~~i~~~ 261 (361)
+..+.+++|+|+ | ++|.+.++.+...|+ +|+++++++++++...+ ++...+ + |..+.+ .+.+.+...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence 445789999987 6 899999999999998 79999888876655432 443322 2 222221 233333332
Q ss_pred cC--CCccEEEEccCC
Q 018072 262 TN--GGVDRSVECTGN 275 (361)
Q Consensus 262 ~~--~g~Dvvid~~g~ 275 (361)
.. +++|++|+++|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 21 378999999984
No 219
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.016 Score=52.27 Aligned_cols=84 Identities=27% Similarity=0.277 Sum_probs=54.2
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCC--EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072 192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT--DFVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~--~vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
..-++.++||+|+ |.+|...+..+...|. +|+.++++++..+.+.+. .-. ..+..+-.+ ..+.+.+.+..+ +
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3357789999998 9999999999888898 799999988766655432 211 122222222 123233332221 3
Q ss_pred CccEEEEccCCh
Q 018072 265 GVDRSVECTGNI 276 (361)
Q Consensus 265 g~Dvvid~~g~~ 276 (361)
++|+||+++|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999998753
No 220
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.39 E-value=0.038 Score=50.95 Aligned_cols=43 Identities=23% Similarity=0.245 Sum_probs=38.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 237 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~ 237 (361)
.+.+|+|+|+|++|.+++..+...|+.+|+.++++.+|.+.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4679999999999999999999999989999999988877654
No 221
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.38 E-value=0.017 Score=59.57 Aligned_cols=76 Identities=28% Similarity=0.336 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-Cc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-DR 252 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~-~~ 252 (361)
.+++|+|+|+|+.|+.++..++..|. .|+++++.+. ..++++++|++..++.... +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7988887763 4667788998876665432 11
Q ss_pred cHHHHHHHHcCCCccEEEEccCCh
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNI 276 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~ 276 (361)
++. .+. .++|.||.++|..
T Consensus 388 ~~~----~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCCC
Confidence 222 221 2699999999863
No 222
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.38 E-value=0.021 Score=51.71 Aligned_cols=80 Identities=23% Similarity=0.317 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dv 268 (361)
++.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ..+..+-.+ ..+.+.+.+... +.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4678999988 8999999998888998 89999999887766644 3322 122222122 123333333322 36899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+|+++|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9999873
No 223
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.023 Score=51.74 Aligned_cols=78 Identities=23% Similarity=0.315 Sum_probs=52.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEE--EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF--VNTSEHDRPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~v--v~~~~~~~~~~~~i~~~~~--~g~Dvv 269 (361)
+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+. .++.... .|..+.+ ++.+.+..... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 578999998 9999999998888898 8999989988876543 3442222 2333322 23333333322 378999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
|+++|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999873
No 224
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.36 E-value=0.066 Score=48.98 Aligned_cols=103 Identities=14% Similarity=0.227 Sum_probs=65.4
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HHcCCCEE--EcCCCCCccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~-~~~G~~~v--v~~~~~~~~~~~~i~~~~~-- 263 (361)
.+.++||+|+ +++|.+.++.+...|+ +|+.++++++ +++.+ ++++.... .|..+.+ .+.+.+.....
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHc
Confidence 3678999986 4899999998888999 8888888752 33333 34554332 3333322 24444444332
Q ss_pred CCccEEEEccCCh--------------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072 264 GGVDRSVECTGNI--------------D---------------NMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 264 ~g~Dvvid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+.+|++++++|.. + .....++.|..+ |+++.++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 3799999998841 1 124555667776 9999887544
No 225
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.018 Score=51.74 Aligned_cols=80 Identities=26% Similarity=0.287 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHD-RPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~-~~~~~~i~~~~~--~g~Dv 268 (361)
.+.++||+|+ |++|...++.+...|+ +|+.++++++..+...++.... .+..+-.+ .++.+.+.+..+ +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999988888898 8999999887665555543221 22222222 123333333222 36899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+|+++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999874
No 226
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.36 E-value=0.028 Score=49.67 Aligned_cols=95 Identities=25% Similarity=0.310 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
-+|.+||=+|+|+ |+++.-+|+ +|+ +|+++|.+++..+.++...... -++|.... .+.+... ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~---~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQAT---VEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhhh---HHHHHhc-CCCccEEEE
Confidence 4788999999965 666665554 577 9999999999999987533322 14454432 2222221 148999986
Q ss_pred -----ccCChH-HHHHHHHHhcCCCcEEEEE
Q 018072 272 -----CTGNID-NMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 272 -----~~g~~~-~~~~~~~~l~~~~G~iv~~ 296 (361)
-+..++ .+..+.+.++|+ |.+.+-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 455555 466788889997 876654
No 227
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.33 E-value=0.039 Score=46.57 Aligned_cols=79 Identities=22% Similarity=0.223 Sum_probs=56.3
Q ss_pred CCCCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072 192 KPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 270 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~-vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvi 270 (361)
.--.|.+|+|+|+|. +|..++..+...|+ +|+.+.++.+. ..+.+ ..+|+||
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~---------------------l~~~l-----~~aDiVI 92 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN---------------------LKEHT-----KQADIVI 92 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh---------------------HHHHH-----hhCCEEE
Confidence 345789999999986 59989999999998 78888765311 22222 1489999
Q ss_pred EccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 271 ECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 271 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
.+++.+..+.. +.++++ -.++.++.+.
T Consensus 93 sat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 93 VAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred EcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 99999775443 346665 6777887765
No 228
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.33 E-value=0.035 Score=49.40 Aligned_cols=104 Identities=23% Similarity=0.277 Sum_probs=73.9
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
....++.||++|+=.|.|. |.+++-+|++.|. .+|+..+..++..+.|++ +|....+.....| +.+.+ .
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~~---~ 160 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREGI---D 160 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--ccccc---c
Confidence 4678999999999988765 8888889988875 699999999998888854 4554423222222 22211 1
Q ss_pred CCCccEEE-EccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 263 NGGVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 263 ~~g~Dvvi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+..+|+|| |....-+.++.+.+.|+++ |.++.+..
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 12687765 4444445789999999998 99988853
No 229
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.048 Score=49.60 Aligned_cols=76 Identities=22% Similarity=0.336 Sum_probs=49.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE----EEcCCCCCccHHHHHHHHcC--CCc
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGV 266 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~----vv~~~~~~~~~~~~i~~~~~--~g~ 266 (361)
+++|+|+ |++|...++.+...|+ +|+.+++++++++.+ +..+... ..|..+.+ .+.+.+.+... +++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence 6899988 9999999998888898 788888887765443 2234332 23333322 12222332221 368
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999974
No 230
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.31 E-value=0.069 Score=46.21 Aligned_cols=105 Identities=20% Similarity=0.336 Sum_probs=63.8
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
....+++++++||=+|+|. |..++.+++.....+|+++|.+++..+.+++ ++...+... ..+ ..+.+..+.
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~-~~d--~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVI-EGS--APECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEE-ECc--hHHHHhhCC-
Confidence 4455778899988888754 5556666665533499999999988877754 555432111 111 222222222
Q ss_pred CCccE-EEEccCC-hHHHHHHHHHhcCCCcEEEEEcC
Q 018072 264 GGVDR-SVECTGN-IDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 264 ~g~Dv-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
..+|. .++.... ...++.+.+.|+++ |+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22344 4443222 35678889999997 99887753
No 231
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.30 E-value=0.018 Score=55.89 Aligned_cols=77 Identities=10% Similarity=0.181 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
-.+.+|+|+|+|.+|.+++..+...|...++++.++.+|.+.+. +++...++. +. .+.... ..+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~-~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LS-ELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HH-HHHHHh-ccCCEEEEC
Confidence 46789999999999999999999999878999999988765554 455222221 22 222211 258999999
Q ss_pred cCChHHH
Q 018072 273 TGNIDNM 279 (361)
Q Consensus 273 ~g~~~~~ 279 (361)
++.+..+
T Consensus 250 T~a~~~v 256 (414)
T PRK13940 250 VNVLEYI 256 (414)
T ss_pred cCCCCee
Confidence 9987653
No 232
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.29 E-value=0.029 Score=46.41 Aligned_cols=97 Identities=22% Similarity=0.250 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
..+.+++|+|+|.+|...++.+...|...|+++++++++.+.+ ++++... ..... + ..+. -+++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~--~--~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL--D--LEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec--c--hhhc-----cccCCEEEe
Confidence 4568999999999999999988888644899999998876654 4455421 01111 1 1111 136899999
Q ss_pred ccCChHH----HHHHHHHhcCCCcEEEEEcCCC
Q 018072 272 CTGNIDN----MISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 272 ~~g~~~~----~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+++.... .......++++ ..++.++..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~~ 119 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVYNP 119 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcCC
Confidence 9987432 11223445665 6666676543
No 233
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.029 Score=50.95 Aligned_cols=79 Identities=20% Similarity=0.339 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCCE-E--EcCCCCCccHHHHHHHHcC-C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-F--VNTSEHDRPIQEVIAEMTN-G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~~~-v--v~~~~~~~~~~~~i~~~~~-~ 264 (361)
.|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ + +... . .|..+.+ ++.+.+..... +
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence 4778999988 8999999999989998 89999999877655432 1 3221 2 2333221 23333333321 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++++++|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 78999999874
No 234
>PRK09186 flagellin modification protein A; Provisional
Probab=96.28 E-value=0.066 Score=47.99 Aligned_cols=78 Identities=19% Similarity=0.423 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc----CCCE----EEcCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD----FVNTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~----G~~~----vv~~~~~~~~~~~~i~~~~~- 263 (361)
.+.++||+|+ |++|...+..+...|+ +|+.+.+++++.+.+. ++ +... ..|..+.+ .+.+.+.....
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence 4678999998 8999999998888898 8999988887765442 22 2221 22333322 23334443322
Q ss_pred -CCccEEEEccC
Q 018072 264 -GGVDRSVECTG 274 (361)
Q Consensus 264 -~g~Dvvid~~g 274 (361)
+++|++|++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999985
No 235
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.27 E-value=0.011 Score=58.05 Aligned_cols=95 Identities=11% Similarity=0.110 Sum_probs=64.8
Q ss_pred hhhcCCCCCCEEE----EEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHH
Q 018072 188 LNVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEM 261 (361)
Q Consensus 188 ~~~~~~~~g~~Vl----I~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~ 261 (361)
....+.++|+.+| |+|+ |++|.+++|+++..|+ .|+++...+.+....+..+.+ .+++..... ..+.+...
T Consensus 26 ~~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~ 102 (450)
T PRK08261 26 VPLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKAL 102 (450)
T ss_pred ccccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHH
Confidence 3457788999888 8865 9999999999999999 899886666644333334444 344443322 33333322
Q ss_pred cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 262 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 262 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
. ..+..+++.|.++ |+++.++...
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 1 3556778888887 9999998655
No 236
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.025 Score=51.71 Aligned_cols=79 Identities=24% Similarity=0.334 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-E-EE--cCCCCCccHHHHHHHHcC--CCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-D-FV--NTSEHDRPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~-vv--~~~~~~~~~~~~i~~~~~--~g~D 267 (361)
.+.++||+|+ |++|...++.+...|. +|+++++++++++.+.+.... . .+ |..+.+ .+.+.+..... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence 3568999998 9999999998888898 899999998887766553222 1 22 222221 23333333222 3689
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++++++|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999885
No 237
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.023 Score=51.08 Aligned_cols=79 Identities=23% Similarity=0.311 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-E--EcCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-v--v~~~~~~~~~~~~i~~~~~--~ 264 (361)
.|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ .+... . .|..+. ..+.+.+..... +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQH-QQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 4789999998 8999999999888999 89999998877655432 23221 2 222222 123333333322 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 238
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.25 E-value=0.09 Score=47.84 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCE-EEcCCCC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTD-FVNTSEH 250 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~-vv~~~~~ 250 (361)
...+|+|+|+|++|..++..+...|..+++.+|.+. .|. +.+.+++... +..+...
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 456899999999999999999999988898887652 111 2223344332 2222111
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 299 (361)
- ..+.+..+...++|+||||..+...-....+.+...+=.++..|..
T Consensus 109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 0 0122333333479999999998555444445544441345555443
No 239
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.23 E-value=0.041 Score=51.29 Aligned_cols=91 Identities=26% Similarity=0.421 Sum_probs=61.7
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~ 275 (361)
.+|.|+|+|.+|...+..++..|. .+|+++++++++.+.+++.|....+. .+ ..+.+ ...|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~--~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS--AAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC--HHHHh-----cCCCEEEECCCH
Confidence 579999999999999998888874 47999999999999888887532111 11 11111 258999999986
Q ss_pred hHH---HHHHHHHhcCCCcEEEEEcC
Q 018072 276 IDN---MISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 276 ~~~---~~~~~~~l~~~~G~iv~~g~ 298 (361)
... ++.....++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 332 22333445565 66666654
No 240
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.22 E-value=0.076 Score=47.75 Aligned_cols=80 Identities=23% Similarity=0.244 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHc--CCC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMT--NGG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~--~~g 265 (361)
.+.++||+|+ |.+|...++.+...|. +|+.+++++++.+.+ ++.+.... +..+-.+ ..+.+.+.... .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3679999998 9999999998888999 888998988655443 33454332 2112122 11222322221 136
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|.++|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999874
No 241
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.21 E-value=0.035 Score=50.79 Aligned_cols=69 Identities=23% Similarity=0.153 Sum_probs=50.4
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 270 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvi 270 (361)
+...+.+++|+|+|+.+.+++..+...|+.+|+++.|+.+|.+.+.+ ++.. +.+.+ ....+|+||
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 34456789999999999999999999998889999999988776643 4311 11011 112589999
Q ss_pred EccC
Q 018072 271 ECTG 274 (361)
Q Consensus 271 d~~g 274 (361)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9975
No 242
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.20 E-value=0.029 Score=50.13 Aligned_cols=79 Identities=20% Similarity=0.320 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
++.++||+|+ |++|...++.+...|. +|+.+++++++.+.+. ..+... .+..+-.+ ..+.+.+..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4779999998 9999999999988998 8999999887655442 234432 22222122 123333333322 36
Q ss_pred ccEEEEccC
Q 018072 266 VDRSVECTG 274 (361)
Q Consensus 266 ~Dvvid~~g 274 (361)
+|++|+++|
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 899999987
No 243
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.20 E-value=0.053 Score=48.60 Aligned_cols=80 Identities=28% Similarity=0.305 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ |.+|...++.+...|. +|+++++++++.+.+. +.+... .+..+-.+ .++.+.+..... ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999998888898 8999999887665442 223322 22222222 123333333221 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|.+++.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 244
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.19 E-value=0.046 Score=48.89 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=69.1
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc-
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 262 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~- 262 (361)
...+..++.+||=+|.|. |..++.+++.++ ..+|+.++.+++..+.+++ .|...-+.....+ ..+.+..+.
T Consensus 62 ~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence 345667788999998743 555566666653 3499999999998887754 5654333333333 444454442
Q ss_pred ---CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072 263 ---NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 263 ---~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g 297 (361)
.+.||+||--... ...++.+++.++++ |.++.-.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 2379999976532 34677889999997 9877543
No 245
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.036 Score=51.22 Aligned_cols=80 Identities=25% Similarity=0.390 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g 265 (361)
.+.+++|+|+ |++|...++.+...|. +|+++++++++++.+.+ .+... .+..+-.+ .++.+.+.... -++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999988 9999999998888898 89999999877655432 33322 22222222 12333333322 137
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++++++|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 246
>PRK06196 oxidoreductase; Provisional
Probab=96.19 E-value=0.034 Score=51.91 Aligned_cols=80 Identities=20% Similarity=0.246 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv 269 (361)
.+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++..-..+..+-.+ ..+.+.+..... +++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4678999998 9999999998888898 8999999887765543 22211222222222 123333443332 379999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
|+++|.
T Consensus 104 i~nAg~ 109 (315)
T PRK06196 104 INNAGV 109 (315)
T ss_pred EECCCC
Confidence 999873
No 247
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.03 Score=50.09 Aligned_cols=80 Identities=25% Similarity=0.274 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.+++|+|+ |.+|...++.+...|. +|+.+++++++.+.+.+ .+.. ..+..+-.+ .++.+....... ++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888898 89999998766544322 2222 122222222 112222222211 26
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|+++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 8999999883
No 248
>PRK06484 short chain dehydrogenase; Validated
Probab=96.18 E-value=0.053 Score=54.31 Aligned_cols=104 Identities=23% Similarity=0.355 Sum_probs=69.1
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE---EEcCCCCCccHHHHHHHHcC--CCc
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGV 266 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~---vv~~~~~~~~~~~~i~~~~~--~g~ 266 (361)
..|.++||+|+ +++|...++.+...|+ +|+.+++++++++.+.+ ++... ..|..+.+ .+.+.+..... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence 46789999988 8999999998888998 89999999888776654 45432 12332221 23333433322 368
Q ss_pred cEEEEccCChH-----------H---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072 267 DRSVECTGNID-----------N---------------MISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 267 Dvvid~~g~~~-----------~---------------~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
|++|+++|... . ...++..++.. |+++.++...
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~ 403 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA 403 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence 99999987420 0 23444556666 8999987643
No 249
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.064 Score=48.90 Aligned_cols=79 Identities=18% Similarity=0.240 Sum_probs=51.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv 269 (361)
+.++||+|+ |++|...++.+...|. +|+.+++++++++.+.+ ++.. ..+..+-.+ ..+.+.+..... +++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 458999987 9999999988888898 89999999887766544 2222 122222222 123333333221 378999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
|+++|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999874
No 250
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.17 E-value=0.02 Score=52.77 Aligned_cols=75 Identities=13% Similarity=0.059 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
.+.+++|+|+|+.+.+++..+..+|+.+|+++.|+.+|.+.+.+ ++... +..... . +.+.... ..+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhcc-cCCCEEEEC
Confidence 57899999999999999999999998899999999888766543 33211 111110 0 1111111 268999999
Q ss_pred cCC
Q 018072 273 TGN 275 (361)
Q Consensus 273 ~g~ 275 (361)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
No 251
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.15 E-value=0.08 Score=46.09 Aligned_cols=82 Identities=28% Similarity=0.300 Sum_probs=56.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
-.|.+++|+|.|.+|..+++.+...|+ +|+++++++++.+.+.+ +|+. .++..+ +....+|+++-+
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----------l~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----------IYSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----------hccccCCEEEec
Confidence 357899999999999999999999999 89999999988777654 4643 222211 111157888866
Q ss_pred cCChHHHHHHHHHhcC
Q 018072 273 TGNIDNMISAFECVHD 288 (361)
Q Consensus 273 ~g~~~~~~~~~~~l~~ 288 (361)
......-+..++.|+.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 5543344455566653
No 252
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.14 E-value=0.016 Score=53.16 Aligned_cols=45 Identities=36% Similarity=0.425 Sum_probs=40.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~ 238 (361)
.+|++++|+|+|+.+.+++..+...|+.+|+++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 468999999999999999999999998899999999998777755
No 253
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.13 E-value=0.023 Score=58.71 Aligned_cols=76 Identities=24% Similarity=0.296 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-C
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D 251 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~-~ 251 (361)
..|.+|+|+|+|+.|+.++..++..|. +|+++++.+. ..+.++++|++...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 7998987543 3556677887655443221 1
Q ss_pred ccHHHHHHHHcCCCccEEEEccCC
Q 018072 252 RPIQEVIAEMTNGGVDRSVECTGN 275 (361)
Q Consensus 252 ~~~~~~i~~~~~~g~Dvvid~~g~ 275 (361)
.++.+ +. .+||.||.++|.
T Consensus 404 i~~~~----~~-~~~DavilAtGa 422 (654)
T PRK12769 404 ISLES----LL-EDYDAVFVGVGT 422 (654)
T ss_pred CCHHH----HH-hcCCEEEEeCCC
Confidence 11211 11 269999999886
No 254
>PRK06128 oxidoreductase; Provisional
Probab=96.11 E-value=0.094 Score=48.54 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=61.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--h----HHHHHHcCCCEE-E--cCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--R----FEEAKKFGVTDF-V--NTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~----~~~~~~~G~~~v-v--~~~~~~~~~~~~i~~~~~- 263 (361)
.+.++||+|+ |++|...+..+...|+ +|+.+.++.+ . .+.+++.|.... + |..+. ..+.+.+.....
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE-AFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHHHHH
Confidence 4679999988 9999999998888898 7777655432 1 223334454332 2 22221 123333333222
Q ss_pred -CCccEEEEccCCh---H-----------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072 264 -GGVDRSVECTGNI---D-----------------------NMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 264 -~g~Dvvid~~g~~---~-----------------------~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+++|++|+++|.. . ..+.+++.+..+ |+++.++...
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~~ 194 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSIQ 194 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCcc
Confidence 3799999998741 0 123444455666 8998887543
No 255
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.039 Score=49.56 Aligned_cols=75 Identities=15% Similarity=0.117 Sum_probs=49.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHHcCCCccEE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRS 269 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvv 269 (361)
+.++||+|+ |++|...++.+...|+ +|+++.+++++.+.+.+ .+... ++..+-.+ . +.+.....+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~-~~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A-IDRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H-HHHHHHhcCCCCEE
Confidence 457999998 9999999999999998 89999888776555432 33321 22111122 1 23333333489999
Q ss_pred EEccC
Q 018072 270 VECTG 274 (361)
Q Consensus 270 id~~g 274 (361)
|+++|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99987
No 256
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.08 E-value=0.041 Score=50.24 Aligned_cols=80 Identities=15% Similarity=0.223 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhH---HHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRF---EEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~---~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
.+.++||+|+ + ++|.+.++.+...|+ +|+.++++++.. +.+ +++|....+..+-.+ .++.+.+..... +
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4678999998 4 899999998888999 888887765322 222 334543332222222 123333333322 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|++++++|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 79999999873
No 257
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.037 Score=49.38 Aligned_cols=79 Identities=19% Similarity=0.345 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-E--cCCCCCccHHHHHHHHcC--CCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-V--NTSEHDRPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v--~~~~~~~~~~~~i~~~~~--~g~D 267 (361)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.... + |..+.+ +..+.+..... +++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVA-AQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4678999998 9999999999999998 899999987766554 34554322 2 222211 12222222221 3689
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++|+++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
No 258
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.07 E-value=0.026 Score=51.40 Aligned_cols=130 Identities=22% Similarity=0.226 Sum_probs=88.5
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC---------CccHHHHHHHH
Q 018072 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAEM 261 (361)
Q Consensus 191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~---------~~~~~~~i~~~ 261 (361)
+..-++.++++.|.|.+|+.++..++..|+ .|...+....+.+..+.+|+..+-..+.+ ..+|.+.-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 345677899999999999999999999999 89999999999999988888653222111 11233332232
Q ss_pred c-C--CCccEEEEcc---CChH--H-HHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc--cccEEEEee
Q 018072 262 T-N--GGVDRSVECT---GNID--N-MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF 322 (361)
Q Consensus 262 ~-~--~g~Dvvid~~---g~~~--~-~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~--~~~~l~g~~ 322 (361)
. . .++|+||-+. |.+. . -...++.|+++ +.++.+....+.+.-...+.... ++++|.|..
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 2 2 2899999975 2221 2 34778899997 99998865543322222222222 899999875
No 259
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.04 Score=49.69 Aligned_cols=79 Identities=18% Similarity=0.173 Sum_probs=51.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC--C-EEEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DFVNTSEHD-RPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~--~-~vv~~~~~~-~~~~~~i~~~~~--~g~D 267 (361)
+.+++|+|+ |++|...+..+...|+ +|+.++++.++++.+.+ +.. . ..+..+-.+ ..+.+.+..... +.+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 458999987 9999999998888898 89999999887765533 221 1 122222122 123333333322 2589
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++++++|.
T Consensus 81 ~lv~~ag~ 88 (257)
T PRK07024 81 VVIANAGI 88 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 260
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=96.06 E-value=0.064 Score=47.01 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=65.2
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
.+...++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ ++...+ .....+ ..+ .+..
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~---~~~~ 141 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGD--GWK---GWPA 141 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECC--ccc---CCCc
Confidence 4567789999999998865 55555566553 3 89999999887766644 454321 111111 100 1111
Q ss_pred -CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072 264 -GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 264 -~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
+.||+|+.............+.|+++ |+++..-
T Consensus 142 ~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 142 YAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 37999998766656677888999997 9987653
No 261
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.044 Score=49.51 Aligned_cols=80 Identities=25% Similarity=0.375 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c--CCC-EEEcCCCCC-ccHHHHHHHHc-CCCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFVNTSEHD-RPIQEVIAEMT-NGGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~--G~~-~vv~~~~~~-~~~~~~i~~~~-~~g~D 267 (361)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ + +.. ..+..+-.+ ..+.+...... .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999987 9999999998888898 89999999887665543 2 211 122222222 11222222221 24789
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++++++|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999875
No 262
>PRK00536 speE spermidine synthase; Provisional
Probab=96.05 E-value=0.028 Score=50.96 Aligned_cols=102 Identities=10% Similarity=-0.030 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc-
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC- 272 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~- 272 (361)
...++|||+|+|- |.++-.++|.- .+|+.++.+++-.+.++++=....-..++..-++...+.+...+.||+||--
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 4458999998765 55666788775 2899999999999998883221100111211111112333233479998754
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072 273 TGNIDNMISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 299 (361)
+-.++.++.+.+.|+++ |.++.-+..
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~s 173 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAKH 173 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCCC
Confidence 66767888999999998 999887543
No 263
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.05 E-value=0.06 Score=45.16 Aligned_cols=89 Identities=21% Similarity=0.274 Sum_probs=58.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 277 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~ 277 (361)
+|-++|.|.+|...++-+...|. +|.+.++++++.+.+.+.|+... + + ..+.+. ..|+||-++.+.+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~--s----~~e~~~-----~~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D--S----PAEAAE-----QADVVILCVPDDD 69 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S--S----HHHHHH-----HBSEEEE-SSSHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h--h----hhhHhh-----cccceEeecccch
Confidence 68899999999999998888898 89999999999999888774322 1 1 333332 2588888888766
Q ss_pred HHHHHHHH------hcCCCcEEEEEcCCC
Q 018072 278 NMISAFEC------VHDGWGVAVLVGVPS 300 (361)
Q Consensus 278 ~~~~~~~~------l~~~~G~iv~~g~~~ 300 (361)
..+..+.. +.++ ..++.++...
T Consensus 70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~~ 97 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPG-KIIIDMSTIS 97 (163)
T ss_dssp HHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred hhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence 65554443 4444 5566665444
No 264
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.033 Score=50.40 Aligned_cols=79 Identities=27% Similarity=0.344 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE----EEcCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD----FVNTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~----vv~~~~~~~~~~~~i~~~~~- 263 (361)
.|.+++|+|+ +++|...++.+...|+ +|+.+++++++++.+.+ .+... ..|..+.+ ++.+.+.....
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence 4678999998 8999999999988999 89999998877655422 11112 12333321 23333333322
Q ss_pred -CCccEEEEccCC
Q 018072 264 -GGVDRSVECTGN 275 (361)
Q Consensus 264 -~g~Dvvid~~g~ 275 (361)
+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 368999999984
No 265
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.04 E-value=0.048 Score=51.50 Aligned_cols=91 Identities=24% Similarity=0.281 Sum_probs=56.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhH----HHHHHcCCCEEEcCCCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRF----EEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~----~~~~~~G~~~vv~~~~~ 250 (361)
..+|+|+|+|++|..+++.+...|..+++.+|.+. .|. +.+++++.+..+.....
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~ 103 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT 103 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence 46799999999999999999999998999998874 122 33344544332221111
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 288 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~ 288 (361)
+.+ .+.+.++. .++|+|||++.+.+.-...-+....
T Consensus 104 ~~~-~~~~~~~~-~~~DlVid~~D~~~~r~~in~~~~~ 139 (338)
T PRK12475 104 DVT-VEELEELV-KEVDLIIDATDNFDTRLLINDLSQK 139 (338)
T ss_pred cCC-HHHHHHHh-cCCCEEEEcCCCHHHHHHHHHHHHH
Confidence 101 12333332 2699999999886653333333333
No 266
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.03 E-value=0.052 Score=48.12 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=50.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~Dvvi 270 (361)
+.++||+|+ +++|...++.+...|+ +|+.++++++. .+.+++.++.. ..|..+. .++.+.+..... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTN-AGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCH-HHHHHHHHHHHhhCCCccEEE
Confidence 458999988 8999999998888898 88888887653 33344455432 1232222 123444444332 2689999
Q ss_pred EccCC
Q 018072 271 ECTGN 275 (361)
Q Consensus 271 d~~g~ 275 (361)
+++|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 99874
No 267
>PRK08317 hypothetical protein; Provisional
Probab=96.01 E-value=0.039 Score=48.90 Aligned_cols=104 Identities=24% Similarity=0.341 Sum_probs=69.1
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc--CCCEEEcCCCCCccHHHHHHHHcCC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF--GVTDFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~--G~~~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
.+...++++++||-+|+|. |..+..++...+ ..+++++|.+++.++.+++. .....+.....+ ... . .+.++
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~-~-~~~~~ 86 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADG-L-PFPDG 86 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--ccc-C-CCCCC
Confidence 4567789999999999976 888888888773 34899999999988888764 111111111111 000 0 12234
Q ss_pred CccEEEEcc------CChHHHHHHHHHhcCCCcEEEEEc
Q 018072 265 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 265 g~Dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
.+|+|+... .....+..+.+.|+++ |.+++..
T Consensus 87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 87 SFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 789888632 2234678999999998 9988765
No 268
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.039 Score=49.54 Aligned_cols=80 Identities=20% Similarity=0.275 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.+++|+|+ |++|...+..+...|+ +|+.+++++++++.+. +.+... .+..+-.+ .+..+.+.+... +.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3678999988 8999999998888899 8999989887766542 234332 22222122 123333333222 37
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|+++|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 269
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.042 Score=49.30 Aligned_cols=79 Identities=22% Similarity=0.320 Sum_probs=51.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
|.++||+|+ |++|...++.+...|. +|+++++++++.+.+.+ .+.. ..+..+-.+ ..+.+.+.+... +.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999988 8999999999888999 89999998876655432 2322 222222222 123333333321 368
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999873
No 270
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.037 Score=49.77 Aligned_cols=80 Identities=23% Similarity=0.242 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
.|.++||+|+ |++|...++.+...|+ +|+.+++++++.+..++ .+... .+..+-.+ .++.+.+..... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 3678999998 8999999988888898 78888888876644433 34332 22222122 123333333222 378
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 271
>PLN03075 nicotianamine synthase; Provisional
Probab=95.99 E-value=0.047 Score=50.24 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=67.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHcC-----CCEEEcCCCCCccHHHHHHHHc-CCCc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMT-NGGV 266 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~G-----~~~vv~~~~~~~~~~~~i~~~~-~~g~ 266 (361)
.++++|+-+|+|+.++.++-+++... ..+++.+|.+++..+.+++.- ...-+.+...+ ..+. .. .++|
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~---~~~l~~F 196 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDV---TESLKEY 196 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhc---ccccCCc
Confidence 37799999999999998888886653 338999999999888887643 22223332222 2111 11 2479
Q ss_pred cEEEEcc-------CChHHHHHHHHHhcCCCcEEEEEc
Q 018072 267 DRSVECT-------GNIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 267 Dvvid~~-------g~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
|+||-.+ .....++...+.|+++ |.++.-.
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 9999875 2334678888999997 8876554
No 272
>PLN02476 O-methyltransferase
Probab=95.99 E-value=0.075 Score=48.57 Aligned_cols=105 Identities=20% Similarity=0.211 Sum_probs=70.6
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc-
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 262 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~- 262 (361)
...+..+..+||=+|.+. |..++.+|+.++ -.+|+.++.+++..+.+++ .|...-+.....+ ..+.+..+.
T Consensus 112 ~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence 345567788999998743 666667777664 2379999999998888744 6776433333333 444554442
Q ss_pred ---CCCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 018072 263 ---NGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 263 ---~~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g 297 (361)
.+.||.||--.... +.++.+++.|+++ |.++.=.
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN 228 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN 228 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence 23799999877653 3577889999997 8876543
No 273
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.99 E-value=0.023 Score=49.41 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=61.6
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
+.....++.+||-+|+|. |..+..+|+. |. +|+++|.+++-++.+++ .+...+ .....+ +.+. . .++
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~~--~-~~~ 94 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--LNNL--T-FDG 94 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--hhhC--C-cCC
Confidence 344456778999999876 7777777765 77 99999999987766654 233211 111111 1110 1 123
Q ss_pred CccEEEEccC----C----hHHHHHHHHHhcCCCcEEEEE
Q 018072 265 GVDRSVECTG----N----IDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 265 g~Dvvid~~g----~----~~~~~~~~~~l~~~~G~iv~~ 296 (361)
.||+|+.+.. . ...+....+.|+++ |.++++
T Consensus 95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~ 133 (197)
T PRK11207 95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV 133 (197)
T ss_pred CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 6999997633 1 24566788889998 986544
No 274
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.041 Score=49.39 Aligned_cols=79 Identities=24% Similarity=0.331 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE---EEcCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~---vv~~~~~~~~~~~~i~~~~~--~ 264 (361)
++.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ .+... ..|..+. ..+...+..... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE-DQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH-HHHHHHHHHHHHHcC
Confidence 4678999988 9999999998888998 89999998876655432 23321 2222221 123333333222 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|++|++.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999999874
No 275
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.97 E-value=0.26 Score=38.46 Aligned_cols=92 Identities=22% Similarity=0.286 Sum_probs=61.4
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072 199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 278 (361)
Q Consensus 199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~ 278 (361)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+..+ .+.+++..-..+|.++-++++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhhcCccccCEEEEccCCHHH
Confidence 6788999999999999999665 899999999999999998855 34333333 223333322378999988887543
Q ss_pred HH---HHHHHhcCCCcEEEEE
Q 018072 279 MI---SAFECVHDGWGVAVLV 296 (361)
Q Consensus 279 ~~---~~~~~l~~~~G~iv~~ 296 (361)
-. ...+.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 22 333444454 555543
No 276
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.97 E-value=0.048 Score=49.71 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=51.3
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHHcCCC--EEEcCCCCCccHHHHHHHHcCC--
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNG-- 264 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~----~~~~~~~G~~--~vv~~~~~~~~~~~~i~~~~~~-- 264 (361)
-.|+.|||+|+ +++|.+.++=...+|+ +++.+|.+++. .+..++.|-. .+.|..+. +++.+..++.-++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~-eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDR-EEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCH-HHHHHHHHHHHHhcC
Confidence 46899999988 7999987776667788 88888888753 4444545522 23333332 2243333333322
Q ss_pred CccEEEEccC
Q 018072 265 GVDRSVECTG 274 (361)
Q Consensus 265 g~Dvvid~~g 274 (361)
.+|++++++|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 7899999987
No 277
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.048 Score=50.95 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCC-EE--EcCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVT-DF--VNTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~-~v--v~~~~~~~~~~~~i~~~~~- 263 (361)
.|.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+.+ + +.. .. .|..+.+ .+.+....+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~-sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA-SVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHH-HHHHHHHHHHHh
Confidence 3678999998 8999999998888898 89988898876554322 1 121 12 2332221 23333333322
Q ss_pred -CCccEEEEccCC
Q 018072 264 -GGVDRSVECTGN 275 (361)
Q Consensus 264 -~g~Dvvid~~g~ 275 (361)
+.+|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 378999998873
No 278
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.96 E-value=0.054 Score=52.18 Aligned_cols=92 Identities=26% Similarity=0.338 Sum_probs=55.0
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHH--cCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 199 VAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK--FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 199 VlI~G~g~vG~~a~~~a~~~g~~-~Vi~~~~~~~~~~~~~~--~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
|+|+|+|.+|..+++.+...+.. +|++.+++.++.+.+.+ .+... .+..+-.+ .. .+.++.. +.|+||+|+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~--~~-~l~~~~~-~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND--PE-SLAELLR-GCDVVINCAG 76 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT--HH-HHHHHHT-TSSEEEE-SS
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC--HH-HHHHHHh-cCCEEEECCc
Confidence 68899999999999988877643 89999999999877754 22222 12122222 22 3555544 4699999998
Q ss_pred ChHHHHHHHHHhcCCCcEEEE
Q 018072 275 NIDNMISAFECVHDGWGVAVL 295 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~ 295 (361)
.......+-.++..+ -.++.
T Consensus 77 p~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 77 PFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp GGGHHHHHHHHHHHT--EEEE
T ss_pred cchhHHHHHHHHHhC-CCeec
Confidence 753333444444443 44444
No 279
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.96 E-value=0.045 Score=49.21 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvv 269 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+. ..+.+.+..... +++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNR-DQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence 3678999988 9999999998888898 6766644 4444455544443222 233332 123344433322 368999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
|.++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
No 280
>PRK04457 spermidine synthase; Provisional
Probab=95.95 E-value=0.1 Score=47.42 Aligned_cols=98 Identities=17% Similarity=0.120 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCC---EEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT---DFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~---~vv~~~~~~~~~~~~i~~~~~~g~Dvv 269 (361)
.++.+||++|+|+ |.++..+++.....+|++++.+++-.+.++++ +.. .-+.....| ..+.+... .+.||+|
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~D--a~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEAD--GAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECC--HHHHHHhC-CCCCCEE
Confidence 4567899999976 78888888887655899999999999998874 321 111111122 44444432 3479999
Q ss_pred EEcc-C---------ChHHHHHHHHHhcCCCcEEEEE
Q 018072 270 VECT-G---------NIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 270 id~~-g---------~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
+--. . ..+.++.+.+.|+++ |.++.-
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 8422 1 136788999999998 998763
No 281
>PRK01581 speE spermidine synthase; Validated
Probab=95.94 E-value=0.2 Score=47.50 Aligned_cols=100 Identities=17% Similarity=0.103 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC----------CEEEcCCCCCccHHHHHHHHcC
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV----------TDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~----------~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
....+|||+|+| .|.++..+++..+..+|++++.+++-.+.++++.. +.-+.....| ..+.+.. ..
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~D--a~~fL~~-~~ 224 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCD--AKEFLSS-PS 224 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECc--HHHHHHh-cC
Confidence 445699999976 36667777776666699999999999999986310 0111111112 3344433 33
Q ss_pred CCccEEEEccCCh-----------HHHHHHHHHhcCCCcEEEEEcC
Q 018072 264 GGVDRSVECTGNI-----------DNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 264 ~g~Dvvid~~g~~-----------~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+.||+||--...+ +.+..+.+.|+++ |.++.-..
T Consensus 225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 4799998765332 3567888999998 99877643
No 282
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.94 E-value=0.079 Score=43.30 Aligned_cols=97 Identities=20% Similarity=0.264 Sum_probs=57.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCEEEcCCCCCccH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTDFVNTSEHDRPI 254 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~vv~~~~~~~~~ 254 (361)
+|+|+|+|++|...+..+.+.|..+++.+|.+. .|. +.++++....-+...... +
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~--~ 78 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEG--I 78 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeee--c
Confidence 489999999999999999999998899987651 122 222334432211111111 1
Q ss_pred HH-HHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcE-EEEEcC
Q 018072 255 QE-VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV-AVLVGV 298 (361)
Q Consensus 255 ~~-~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~-iv~~g~ 298 (361)
.+ ....+. .++|+|++|..+........+..+.. +. ++..|.
T Consensus 79 ~~~~~~~~~-~~~diVi~~~d~~~~~~~l~~~~~~~-~i~~i~~~~ 122 (143)
T cd01483 79 SEDNLDDFL-DGVDLVIDAIDNIAVRRALNRACKEL-GIPVIDAGG 122 (143)
T ss_pred ChhhHHHHh-cCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEcC
Confidence 11 111111 36999999999866555555555554 44 444443
No 283
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.93 E-value=0.06 Score=48.06 Aligned_cols=80 Identities=25% Similarity=0.351 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~D 267 (361)
.|.++||+|+ |++|...+..+...|+ +|+.+++++. ..+.+++++... .+..+-.+ .++...+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999998 8999999998888898 8998887652 223334455332 22222221 123333333322 3689
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++++++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999874
No 284
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.056 Score=48.05 Aligned_cols=80 Identities=24% Similarity=0.221 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.+++|+|+ |++|...+..+...|. +|+++++++++.+.+.+ .+... .+..+-.+ ..+...+..... ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999987 9999999999988998 89999998876654432 23222 22222222 123333333222 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++++++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 285
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.89 E-value=0.047 Score=49.09 Aligned_cols=79 Identities=27% Similarity=0.412 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~ 264 (361)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.|... .+ |..+. ..+.+.+..... +
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDH-DAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence 4689999988 9999999998888898 8999999887655432 233322 22 22222 123333333221 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|++|+++|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 286
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.068 Score=47.50 Aligned_cols=80 Identities=28% Similarity=0.389 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC-C---EEEcCCCC-CccHH---HHHHHH
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-T---DFVNTSEH-DRPIQ---EVIAEM 261 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~-~---~vv~~~~~-~~~~~---~~i~~~ 261 (361)
++.+++|+|+ |++|...++.+...|. +|+++++++++.+.+.+ .+. . ...|..+. ...+. +.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3578999988 9999999998888898 89999999877655422 221 1 11332221 11122 233333
Q ss_pred cCCCccEEEEccCC
Q 018072 262 TNGGVDRSVECTGN 275 (361)
Q Consensus 262 ~~~g~Dvvid~~g~ 275 (361)
..+.+|++|+++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999999884
No 287
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.88 E-value=0.054 Score=45.84 Aligned_cols=95 Identities=16% Similarity=0.304 Sum_probs=60.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~ 276 (361)
+|.|+|+ |-+|...++-|+..|. .|+++.+++.|....+..- ++..+-.+ ....-..+ .|+|+||++.+..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~---i~q~Difd--~~~~a~~l--~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVT---ILQKDIFD--LTSLASDL--AGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccce---eecccccC--hhhhHhhh--cCCceEEEeccCC
Confidence 5889998 9999999999999999 8999999999876542211 11111111 11110111 2799999998754
Q ss_pred --H-------HHHHHHHHhcCC-CcEEEEEcCCC
Q 018072 277 --D-------NMISAFECVHDG-WGVAVLVGVPS 300 (361)
Q Consensus 277 --~-------~~~~~~~~l~~~-~G~iv~~g~~~ 300 (361)
+ ..+..+..|+.. --|+..+|..+
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 1 233455666652 14788887644
No 288
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.88 E-value=0.075 Score=48.91 Aligned_cols=44 Identities=25% Similarity=0.271 Sum_probs=38.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~ 238 (361)
.+.+++|+|+|+.+.+++..+...|+.+|+++.++.+|.+.+.+
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~ 169 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD 169 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence 46799999999999999998888998899999999888776643
No 289
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.86 E-value=0.083 Score=48.44 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=65.0
Q ss_pred ccccchhhhhhhhhhhcCC-CCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCc
Q 018072 175 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 175 ~l~~~~~ta~~a~~~~~~~-~~g~~VlI~G~g~-vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~ 252 (361)
.+||.....+. +++..++ -.|.+|+|+|.|. +|.-++.++...|+ +|+.+.+....
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~-------------------- 194 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKD-------------------- 194 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchh--------------------
Confidence 34544333333 2344443 4689999999964 99999999999998 88888553211
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|...
T Consensus 195 -l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 195 -MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred -HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 222221 48999999999777665 468886 8888898754
No 290
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.86 E-value=0.021 Score=51.23 Aligned_cols=108 Identities=22% Similarity=0.199 Sum_probs=66.6
Q ss_pred hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHH-HHHH
Q 018072 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQE-VIAE 260 (361)
Q Consensus 187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~-~i~~ 260 (361)
+....+++||++|+=.|.|. |.++..+++..|. .+|+..+.++++.+.+++ +|....+.....| +.+ ...+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence 35678999999999987654 6677777777653 589999999999888754 6665322222211 110 1101
Q ss_pred HcCCCccEEEEccCChH-HHHHHHHHh-cCCCcEEEEEcC
Q 018072 261 MTNGGVDRSVECTGNID-NMISAFECV-HDGWGVAVLVGV 298 (361)
Q Consensus 261 ~~~~g~Dvvid~~g~~~-~~~~~~~~l-~~~~G~iv~~g~ 298 (361)
..+..+|.||=-...|. .++.+.+.| +++ |+++.+..
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 11236787765555444 789999999 887 99988853
No 291
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.85 E-value=0.059 Score=50.94 Aligned_cols=88 Identities=25% Similarity=0.319 Sum_probs=55.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhH----HHHHHcCCCEEEcCCCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRF----EEAKKFGVTDFVNTSEH 250 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~----~~~~~~G~~~vv~~~~~ 250 (361)
..+|+|+|+|++|..+++.+...|..+++.+|.+. .|. +.+++++....+.....
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~ 103 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ 103 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 36799999999999999999999999999998863 122 23344554332222111
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHH
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC 285 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~ 285 (361)
+. ..+.+.++. .++|+|+|++.+.++-....+.
T Consensus 104 ~~-~~~~~~~~~-~~~DlVid~~Dn~~~r~~ln~~ 136 (339)
T PRK07688 104 DV-TAEELEELV-TGVDLIIDATDNFETRFIVNDA 136 (339)
T ss_pred cC-CHHHHHHHH-cCCCEEEEcCCCHHHHHHHHHH
Confidence 10 112233332 2689999999986654333333
No 292
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.84 E-value=0.1 Score=46.45 Aligned_cols=91 Identities=22% Similarity=0.264 Sum_probs=55.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHH----HHHHcCCCEEEcCCCCCc
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFE----EAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~G~~~vv~~~~~~~ 252 (361)
..+|+|+|+|++|...+..+.+.|..+++.+|.+. .|.+ .+++++.+.-+......
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~- 99 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER- 99 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce-
Confidence 46899999999999999999999998888885542 1222 22334443222222211
Q ss_pred cH-HHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCC
Q 018072 253 PI-QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG 289 (361)
Q Consensus 253 ~~-~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~ 289 (361)
+ .+.+.++. .++|+||+|+.+...-....+.....
T Consensus 100 -i~~~~~~~~~-~~~DvVi~~~d~~~~r~~l~~~~~~~ 135 (228)
T cd00757 100 -LDAENAEELI-AGYDLVLDCTDNFATRYLINDACVKL 135 (228)
T ss_pred -eCHHHHHHHH-hCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 1 12233332 25999999999876644444444443
No 293
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.83 E-value=0.073 Score=47.40 Aligned_cols=101 Identities=20% Similarity=0.203 Sum_probs=60.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCEEEcCCCCCc
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~vv~~~~~~~ 252 (361)
..+|+|+|+|++|..++..+.+.|..+++.+|.+. .|. +.+++++.+.-+...+...
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i 90 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFL 90 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeec
Confidence 35799999999999999999999998999987653 111 2223344432222211110
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
..+....+...++|+|+||..+...-....+.....+=.++..+
T Consensus 91 -~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~ 134 (231)
T cd00755 91 -TPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM 134 (231)
T ss_pred -CHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 01233334444699999999886654445555554412344443
No 294
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.072 Score=47.05 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=49.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-EcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
+++|+|+ |++|...++.+...|. +|+.+++++++++.+ ++++...+ .|..+. ..+.+.+.... +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDP-ASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCH-HHHHHHHHHHh-hcCcEEEECCC
Confidence 5899987 9999999998888898 899999998877655 34444332 222222 12333333332 26899999865
No 295
>PRK06194 hypothetical protein; Provisional
Probab=95.82 E-value=0.058 Score=49.40 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=50.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H---cCCCE-EEcCCCCC-ccHHHHHHHHc--CCCc
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD-FVNTSEHD-RPIQEVIAEMT--NGGV 266 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~---~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g~ 266 (361)
+.++||+|+ |++|...++.+...|+ +|+.++++.++++... + .+... .+..+-.+ ..+.+.+.... .+++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999987 9999999998888898 8999998876654432 2 23332 12222222 12333333222 1368
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|+++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999875
No 296
>PLN02253 xanthoxin dehydrogenase
Probab=95.82 E-value=0.048 Score=49.80 Aligned_cols=79 Identities=19% Similarity=0.204 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCC--C-EE--EcCCCCCccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV--T-DF--VNTSEHDRPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~--~-~v--v~~~~~~~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++. . .. .|..+.+ .+.+.+..... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence 3678999987 9999999988888898 8999988776554432 3321 1 12 2333221 23333333222 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|+++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 297
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.046 Score=49.17 Aligned_cols=80 Identities=23% Similarity=0.314 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHHcCCCEE---EcCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~----~~~~G~~~v---v~~~~~~~~~~~~i~~~~~--~ 264 (361)
.+.+++|+|+ |++|...++.+...|+..|+++++++++.+. +++.+.... .|..+.+ .+.+.+..... +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4678999998 9999999999989999449999888765542 233444321 2332221 23333333221 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 68999999874
No 298
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.81 E-value=0.053 Score=50.73 Aligned_cols=78 Identities=21% Similarity=0.294 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcC---CC-EE--EcCCCCCccHHHHHHHHc--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG---VT-DF--VNTSEHDRPIQEVIAEMT--NG 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G---~~-~v--v~~~~~~~~~~~~i~~~~--~~ 264 (361)
++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++. .. .. .|..+. ..+.+.+..+. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDL-DSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCH-HHHHHHHHHHHHhCC
Confidence 4678999988 9999999998888898 8999999887765543 232 11 12 222221 12333333322 12
Q ss_pred CccEEEEccC
Q 018072 265 GVDRSVECTG 274 (361)
Q Consensus 265 g~Dvvid~~g 274 (361)
++|++|+++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6899999987
No 299
>PRK08589 short chain dehydrogenase; Validated
Probab=95.81 E-value=0.051 Score=49.52 Aligned_cols=79 Identities=23% Similarity=0.323 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE---EEcCCCCCccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~---vv~~~~~~~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ +++|...++.+...|+ +|+.++++++..+.+.+ .+... ..|..+.+ ++.+.+..... ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence 4679999988 8999999988888898 89999888433233332 33321 23333221 23333333322 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|+++|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999999874
No 300
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.81 E-value=0.074 Score=48.72 Aligned_cols=79 Identities=27% Similarity=0.360 Sum_probs=58.5
Q ss_pred CCCCEEEEEcC-CHHHHH-HHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC---EEEcCCCCCccHHHHHHHHcC
Q 018072 194 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT---DFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~-a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~---~vv~~~~~~~~~~~~i~~~~~ 263 (361)
+-|++.+|+|+ .++|.. |-++|+ .|. +|+.+.|+++|++..++ .++. .++|+...+. .-+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 56789999998 799977 555666 899 79999999999887643 5543 3677777664 3455555555
Q ss_pred C-CccEEEEccCC
Q 018072 264 G-GVDRSVECTGN 275 (361)
Q Consensus 264 ~-g~Dvvid~~g~ 275 (361)
+ .+-+.++++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 78899999984
No 301
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.80 E-value=0.073 Score=48.00 Aligned_cols=77 Identities=26% Similarity=0.381 Sum_probs=49.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv 269 (361)
++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +.+....+..+-.+ ..+.+.+..... +++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899988 8999999998888898 8999999887765442 22322222222222 123333333322 378999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
|++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999874
No 302
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=95.79 E-value=0.028 Score=43.94 Aligned_cols=96 Identities=26% Similarity=0.330 Sum_probs=58.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
|.+||-.|+|. |...+.+++.. ..+++++|.+++..+.++. .+.+.-+.....+ +.+....+..+.+|+|+-
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D--~~~~~~~~~~~~~D~Iv~ 76 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGD--ARDLPEPLPDGKFDLIVT 76 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESH--HHHHHHTCTTT-EEEEEE
T ss_pred CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECc--hhhchhhccCceeEEEEE
Confidence 56788887643 44555555554 4499999999998888765 3332111111222 433333344458999998
Q ss_pred ccCC--------------hHHHHHHHHHhcCCCcEEEEE
Q 018072 272 CTGN--------------IDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 272 ~~g~--------------~~~~~~~~~~l~~~~G~iv~~ 296 (361)
+..- ...++.+.+.|+++ |.++++
T Consensus 77 npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 77 NPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp --STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 6532 12477899999997 998765
No 303
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.056 Score=49.24 Aligned_cols=78 Identities=18% Similarity=0.283 Sum_probs=50.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEEE
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRSV 270 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvvi 270 (361)
.++||+|+ |++|...++.+...|. +|+++.+++++++.+.+ .+... ++..+-.+ ..+.+.+..... +++|++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 47999987 9999999988888898 89999999887766654 23221 22222122 123333333221 3689999
Q ss_pred EccCC
Q 018072 271 ECTGN 275 (361)
Q Consensus 271 d~~g~ 275 (361)
+++|.
T Consensus 82 ~~ag~ 86 (276)
T PRK06482 82 SNAGY 86 (276)
T ss_pred ECCCC
Confidence 99874
No 304
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.051 Score=48.96 Aligned_cols=79 Identities=23% Similarity=0.269 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCCE-EE--cCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-FV--NTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~~-vv--~~~~~~~~~~~~i~~~~~- 263 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ + +... .+ |..+. .++.+.+.....
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA-ASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence 4678999988 9999999998888998 89999998877655432 2 2221 22 22222 123333333322
Q ss_pred -CCccEEEEccCC
Q 018072 264 -GGVDRSVECTGN 275 (361)
Q Consensus 264 -~g~Dvvid~~g~ 275 (361)
+.+|++|+++|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 379999999873
No 305
>PRK07985 oxidoreductase; Provisional
Probab=95.76 E-value=0.13 Score=47.57 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=61.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHH----HHcCCCE-E--EcCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~~----~~~G~~~-v--v~~~~~~~~~~~~i~~~~~- 263 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+.++. ++.+.+ ++.+... . .|..+. ..+.+.+.....
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE-KFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence 4678999998 9999999998888898 788776542 233332 2334322 1 222222 123333333322
Q ss_pred -CCccEEEEccCCh-----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072 264 -GGVDRSVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 264 -~g~Dvvid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+++|+++++.|.. + ....+++.+..+ |+++.++...
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~ 188 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ 188 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence 3789999988731 0 123444556666 8999887543
No 306
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.091 Score=47.37 Aligned_cols=82 Identities=20% Similarity=0.253 Sum_probs=50.9
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChhh-HHH----HHHcCC-C-EEEcCCCCC-ccHHHHHHHHc
Q 018072 193 PERGSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKR-FEE----AKKFGV-T-DFVNTSEHD-RPIQEVIAEMT 262 (361)
Q Consensus 193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~-~~~----~~~~G~-~-~vv~~~~~~-~~~~~~i~~~~ 262 (361)
+..+.+|||+|+ |++|...++-+...| + +|+.+++++++ ++. +++.+. . +++..+-.+ .++.+.+....
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999998 999999888766665 6 89999888765 332 333343 1 222222222 12333344333
Q ss_pred C-CCccEEEEccCC
Q 018072 263 N-GGVDRSVECTGN 275 (361)
Q Consensus 263 ~-~g~Dvvid~~g~ 275 (361)
. +++|+++.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 479999987764
No 307
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.76 E-value=0.073 Score=47.16 Aligned_cols=79 Identities=23% Similarity=0.318 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEE---cCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV---NTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv---~~~~~~~~~~~~i~~~~~--~ 264 (361)
++.++||+|+ |.+|...++.+...|. +|+++++++++.+.+ +..+....+ |..+. ..+.+.+..... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE-AAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 3568999998 9999999998888898 799999988775443 234443322 22222 123333333221 2
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|.+++++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999864
No 308
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.76 E-value=0.059 Score=48.52 Aligned_cols=79 Identities=29% Similarity=0.460 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv--~~~~~~~~~~~~i~~~~~--~ 264 (361)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++++.+.+ .+... .+ |..+. ..+.+.+..... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~-~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADE-ADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence 4678999987 9999999998888898 89999998877655432 23321 22 22222 123333333222 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++|.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 309
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.75 E-value=0.04 Score=50.62 Aligned_cols=95 Identities=20% Similarity=0.206 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
..+.+++|+|+|++|.+++..+...|..+|+++.++.++.+.+.+ ++....+.. ..+ ..+. -..+|+||++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~~~-----~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQEE-----LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--chhc-----cccCCEEEEC
Confidence 456789999999999999999999996699999999988766543 332110111 000 1000 0268999999
Q ss_pred cCChHH-----HHHHHHHhcCCCcEEEEEc
Q 018072 273 TGNIDN-----MISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 273 ~g~~~~-----~~~~~~~l~~~~G~iv~~g 297 (361)
+...-. .......+++. ..++.+-
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 865211 01223566665 6666553
No 310
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.056 Score=48.45 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+... .+..+-.+ ..+.+.+..... ++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999988888898 899999987765433 3334332 22112111 123333332211 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|+++++.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 311
>PRK05717 oxidoreductase; Validated
Probab=95.75 E-value=0.076 Score=47.72 Aligned_cols=80 Identities=23% Similarity=0.276 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv 268 (361)
.|.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++... .+..+-.+ ..+.+.+.+... +.+|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999987 9999999998888898 899888877655443 3344322 22222122 123333333322 36899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+|++.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999874
No 312
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.036 Score=50.28 Aligned_cols=76 Identities=26% Similarity=0.365 Sum_probs=50.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCccEEEE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE 271 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~Dvvid 271 (361)
+.+++|+|+ |++|...++.+...|+ +|+++++++++.+.. .+... ..|..+. .++.+.+..... +.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~-~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDD-ASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCH-HHHHHHHHHHHHhCCCCCEEEE
Confidence 468999988 9999999988888898 899998887665432 12222 2233222 224444444322 36899999
Q ss_pred ccCC
Q 018072 272 CTGN 275 (361)
Q Consensus 272 ~~g~ 275 (361)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 313
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.052 Score=48.50 Aligned_cols=80 Identities=21% Similarity=0.254 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c--CCC-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~--G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
.+.+++|+|+ |.+|...++.+...|+ +|+.+.++.++.+...+ + +.. ..+..+-.+ ..+.+.+..... +++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3568999988 9999999988878898 89999888776554332 2 322 222222222 123333333221 378
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|+++++.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
No 314
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.74 E-value=0.11 Score=44.83 Aligned_cols=76 Identities=29% Similarity=0.275 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCCEE-EcCCCCCccHHHHHHHHcCCCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-VNTSEHDRPIQEVIAEMTNGGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~~~v-v~~~~~~~~~~~~i~~~~~~g~D 267 (361)
.+.+++|+|+ |.+|...+..+...|. +|+.+.++.++.+.+.+ + +.... .+..+ .. .+.+.. .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~-~~~~~~-~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----DA-ARAAAI-KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----HH-HHHHHH-hcCC
Confidence 5689999997 9999988888888887 89999999887666543 2 33221 11111 11 122221 2589
Q ss_pred EEEEccCChH
Q 018072 268 RSVECTGNID 277 (361)
Q Consensus 268 vvid~~g~~~ 277 (361)
+||.++..+.
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999887643
No 315
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.73 E-value=0.06 Score=48.45 Aligned_cols=79 Identities=16% Similarity=0.327 Sum_probs=50.2
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--E--EcCCCCCccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~g---~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--v--v~~~~~~~~~~~~i~~~~~--~g 265 (361)
.|.+++|+|++ ++|.+.++.+...|+ +|+.++++++..+.++++.... . .|..+. .++.+.+..... +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD-ESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCH-HHHHHHHHHHHHHhCC
Confidence 46889999874 899999998888998 8988888754444444442221 2 222221 123333333322 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++++++|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999999873
No 316
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.17 Score=45.70 Aligned_cols=78 Identities=17% Similarity=0.326 Sum_probs=48.0
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHHH-Hc-CCC-EE--EcCCCCCccHHHHHHHHcC
Q 018072 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAK-KF-GVT-DF--VNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~---~~~~~~~-~~-G~~-~v--v~~~~~~~~~~~~i~~~~~ 263 (361)
.|.+++|+|+ +++|.+.++.+...|+ +|+.+++++ ++++.+. ++ +.. .. .|..+. ..+.+.+.....
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD-EEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHHHHH
Confidence 4678999986 5999999988888898 788876543 3344332 33 222 12 233222 224444444332
Q ss_pred --CCccEEEEccC
Q 018072 264 --GGVDRSVECTG 274 (361)
Q Consensus 264 --~g~Dvvid~~g 274 (361)
+++|++++++|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999999886
No 317
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.72 E-value=0.16 Score=47.81 Aligned_cols=94 Identities=17% Similarity=0.162 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHH-HHHcCCCeEEEEcCChhhHHHHHH-----cCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEG-ARIAGASRIIGVDRSSKRFEEAKK-----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 267 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~-a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~vv~~~~~~~~~~~~i~~~~~~g~D 267 (361)
+...+++|+|+|..|...+.. +...+.++|.++++++++.+.+.+ ++... ..+.+ +.+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~----~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS----ADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC----HHHHH-----hcCC
Confidence 456789999999999877754 445688899999999888765432 34432 21221 33333 2589
Q ss_pred EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 268 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 268 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+|+.++++...+- . +.++++ -.++.+|...
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence 9999998865433 3 888886 7777888754
No 318
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.043 Score=49.25 Aligned_cols=75 Identities=21% Similarity=0.342 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EE--EcCCCCCccHHHHHHHHcC--CCccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~v--v~~~~~~~~~~~~i~~~~~--~g~Dv 268 (361)
.+.++||+|+ |++|...++.+...|. +|+.+++++++ ...+.. .. .|..+. .++.+.+..... +.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDP-DQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence 4789999987 9999999998888898 89999888765 112221 12 222221 123333333221 36899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+|+++|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999873
No 319
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.70 E-value=0.16 Score=45.98 Aligned_cols=96 Identities=25% Similarity=0.263 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv 269 (361)
.++.+||=+|+|. |..+..+++. |. +|+++|.+++.++.+++. |...-+.....+ .. .+....++.||+|
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~-~l~~~~~~~fD~V 116 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQ-DIAQHLETPVDLI 116 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HH-HHhhhcCCCCCEE
Confidence 4567899888876 6777777775 66 899999999988887653 322111111111 21 1222234479999
Q ss_pred EEcc-----CC-hHHHHHHHHHhcCCCcEEEEE
Q 018072 270 VECT-----GN-IDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 270 id~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 296 (361)
+... .. ...+..+.+.|+++ |+++++
T Consensus 117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 8542 22 24578889999998 998765
No 320
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.70 E-value=0.075 Score=48.02 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=63.0
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChhhH---HHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRF---EEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~g---~vG~~a~~~a~~~g~~~Vi~~~~~~~~~---~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
.|.++||+|++ ++|.+.++.+...|+ +|+.++++++.. +.+ ++++....+..+-.+ .++.+.+..... +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 46889999873 899999988888898 888888875432 222 334432333222222 123333333322 3
Q ss_pred CccEEEEccCCh--------------HH---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072 265 GVDRSVECTGNI--------------DN---------------MISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 265 g~Dvvid~~g~~--------------~~---------------~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
.+|++++++|.. +. ...++..|+.+ |+++.++...
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~~ 151 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYYG 151 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEeccc
Confidence 789999998731 11 13455667766 8888876543
No 321
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.088 Score=47.73 Aligned_cols=79 Identities=24% Similarity=0.367 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.. .+.+... .+..+-.+ .++.+.+..... ++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999998888898 899999887765433 2233322 22222222 123333433322 36
Q ss_pred ccEEEEccC
Q 018072 266 VDRSVECTG 274 (361)
Q Consensus 266 ~Dvvid~~g 274 (361)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 899998876
No 322
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.67 E-value=0.075 Score=47.69 Aligned_cols=91 Identities=20% Similarity=0.253 Sum_probs=54.8
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-------------------hH----HHHHHcCCCEEEcCCCCCcc
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-------------------RF----EEAKKFGVTDFVNTSEHDRP 253 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-------------------~~----~~~~~~G~~~vv~~~~~~~~ 253 (361)
.+|+|+|+|++|..+++.+.+.|..+++.+|.+.- |. +.+++++.+.-+.......+
T Consensus 25 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~ 104 (240)
T TIGR02355 25 SRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLD 104 (240)
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCC
Confidence 68999999999999999999999989988866531 11 22334444332222111100
Q ss_pred HHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCC
Q 018072 254 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG 289 (361)
Q Consensus 254 ~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~ 289 (361)
.+.+.++. .++|+|+|++.+.+.-...-+.....
T Consensus 105 -~~~~~~~~-~~~DlVvd~~D~~~~r~~ln~~~~~~ 138 (240)
T TIGR02355 105 -DAELAALI-AEHDIVVDCTDNVEVRNQLNRQCFAA 138 (240)
T ss_pred -HHHHHHHh-hcCCEEEEcCCCHHHHHHHHHHHHHc
Confidence 11222222 26899999999876543333433333
No 323
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.66 E-value=0.11 Score=46.88 Aligned_cols=92 Identities=21% Similarity=0.286 Sum_probs=55.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCEEEcCCCCCc
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~vv~~~~~~~ 252 (361)
..+|+|+|+|++|..++..+.+.|..+++.+|.+. .|. +.++++..+.-+.......
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i 111 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL 111 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 46899999999999999999999998898886653 122 2233344432222111110
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCC
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG 289 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~ 289 (361)
+ .+.+.++. .++|+||||+.+.+......+.....
T Consensus 112 ~-~~~~~~~~-~~~DiVi~~~D~~~~r~~ln~~~~~~ 146 (245)
T PRK05690 112 D-DDELAALI-AGHDLVLDCTDNVATRNQLNRACFAA 146 (245)
T ss_pred C-HHHHHHHH-hcCCEEEecCCCHHHHHHHHHHHHHh
Confidence 0 11222222 26999999999876544444444443
No 324
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.66 E-value=0.063 Score=48.26 Aligned_cols=79 Identities=20% Similarity=0.331 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCE---EEcCCCCCccHHHHHHHHcC--CCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~---vv~~~~~~~~~~~~i~~~~~--~g~ 266 (361)
.|.++||+|+ +++|.+.++.+...|+ +|+.+++++. ..+.+++.+... ..|..+.+ ++.+.+..... +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4688999988 8999999998888999 8888876542 123334455432 22333322 24344433322 379
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999873
No 325
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.068 Score=48.20 Aligned_cols=80 Identities=23% Similarity=0.224 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.++++++..+.+++ .+... .+..+-.+ .++.+.+.+... +.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999998888898 89999888754443332 23332 12112111 123333333222 368
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999999883
No 326
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.64 E-value=0.2 Score=44.44 Aligned_cols=91 Identities=21% Similarity=0.237 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHHcCCCEEEcCCCCCccHHHHHH
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA 259 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~--~Vi~~~~~----~~~--------~~~~~~~G~~~vv~~~~~~~~~~~~i~ 259 (361)
-.+.+++|+|+|..|...+..+...|.. +|+.++++ .++ .++++.++... . .. ++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~--~l~~~l- 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GG--TLKEAL- 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cC--CHHHHH-
Confidence 4567999999999999999988888997 89999998 443 33445543211 0 01 133333
Q ss_pred HHcCCCccEEEEccCChHHH-HHHHHHhcCCCcEEEEEc
Q 018072 260 EMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 260 ~~~~~g~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g 297 (361)
.++|++|++++. ..+ +..++.|.++ ..+..+.
T Consensus 96 ----~~~dvlIgaT~~-G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 ----KGADVFIGVSRP-GVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred ----hcCCEEEeCCCC-CCCCHHHHHhhCCC-CEEEEeC
Confidence 248999999973 333 3666777765 5555444
No 327
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.64 E-value=0.057 Score=48.63 Aligned_cols=79 Identities=28% Similarity=0.317 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE---EEcCCCCCccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~---vv~~~~~~~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+++++...+..++ .+.+. ..|..+.+ ++.+.+.+... ++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence 3678999988 9999999998888898 89999887643333332 34332 22333321 23333333322 37
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++++++|.
T Consensus 85 id~lv~nAg~ 94 (260)
T PRK12823 85 IDVLINNVGG 94 (260)
T ss_pred CeEEEECCcc
Confidence 9999999873
No 328
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.067 Score=47.92 Aligned_cols=79 Identities=20% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
+.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ .+.. ..+..+-.+ ..+.+.+..... +.+
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 568999987 9999999999888998 89999998776554432 2332 122222221 123333333222 268
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|+++++.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999998873
No 329
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.63 E-value=0.071 Score=47.94 Aligned_cols=79 Identities=24% Similarity=0.298 Sum_probs=51.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvv 269 (361)
+.++||+|+ |++|...++.+...|. +|+.++++.++.+.+.+ ++... .+..+-.+ .++.+.+..... +.+|++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 568999998 9999999998888898 89999999887665543 33221 22222111 123333333321 368999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
+++.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998863
No 330
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.63 E-value=0.073 Score=47.66 Aligned_cols=76 Identities=22% Similarity=0.345 Sum_probs=51.0
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-E--EcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-v--v~~~~~~~~~~~~i~~~~~--~g~Dvvi 270 (361)
+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.. ++... . .|..+. .++.+.+..... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence 6899987 9999999998888898 89999999887766543 44332 1 222222 123333333322 3689999
Q ss_pred EccCC
Q 018072 271 ECTGN 275 (361)
Q Consensus 271 d~~g~ 275 (361)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 331
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.63 E-value=0.51 Score=41.68 Aligned_cols=119 Identities=11% Similarity=0.016 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
.+.+|||+|+|.++.-=+..+...|+ +|+++...- +.++.+.+.|.-..+. .. +.+. .+ .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~----~~~~--dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GN----YDKE--FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CC----CChH--Hh--CCCcEEEECC
Confidence 56799999999999888888888898 777774432 2222233333322222 11 1110 11 3789999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN 325 (361)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~ 325 (361)
+.++.-....+..+.. +.++.........++-++.. +. ..+++--+..|.
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~PAi-v~rg~l~IaIST~G~ 144 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIPYQ-RSTKNFVFALNTKGG 144 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEeeeE-EecCCEEEEEECCCc
Confidence 9865555555555565 66666543333444444432 33 456665554444
No 332
>PRK08643 acetoin reductase; Validated
Probab=95.63 E-value=0.065 Score=48.12 Aligned_cols=78 Identities=21% Similarity=0.279 Sum_probs=50.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EE--cCCCCCccHHHHHHHHcC--CC
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--GG 265 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv--~~~~~~~~~~~~i~~~~~--~g 265 (361)
+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ .+... .+ |..+.+ .+.+.+.+... ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 568999988 9999999998888898 89999888776544422 23322 12 222221 23333333321 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|++.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999999864
No 333
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.62 E-value=0.1 Score=45.94 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=30.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
..+|+|+|+|++|...++.+.+.|..+++.+|.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4579999999999999999999999889999887
No 334
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.069 Score=49.57 Aligned_cols=79 Identities=15% Similarity=0.246 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc-----CCC-EEEcCCCCC-ccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT-DFVNTSEHD-RPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~-----G~~-~vv~~~~~~-~~~~~~i~~~~~-- 263 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+.+. ++ +.. ..+..+-.+ ..+.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 5689999988 9999999998888898 8888888877654331 11 121 122222222 123333333322
Q ss_pred CCccEEEEccC
Q 018072 264 GGVDRSVECTG 274 (361)
Q Consensus 264 ~g~Dvvid~~g 274 (361)
+++|++|+++|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 36899999987
No 335
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.069 Score=48.15 Aligned_cols=78 Identities=26% Similarity=0.337 Sum_probs=49.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~D 267 (361)
.++||+|+ |++|...++.+...|. +|+++++++++.+.+. ..+... ++..+-.+ ..+.+.+..... +++|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999988 9999999998888898 8999999876654332 234322 22112122 123333333322 2689
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++|+++|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 336
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.099 Score=47.01 Aligned_cols=75 Identities=21% Similarity=0.358 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
.+.+++|+|+ |++|...++.+...|. +|+++++++ +..+.... +....+..+-.+ . +.+.... +++|++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~-~~~~~~~-~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK--E-ESLDKQL-ASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC--H-HHHHHhc-CCCCEEEEC
Confidence 3679999988 8999999998888898 888888876 33322211 212222222222 1 1222322 369999999
Q ss_pred cCC
Q 018072 273 TGN 275 (361)
Q Consensus 273 ~g~ 275 (361)
+|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 874
No 337
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.59 E-value=0.081 Score=45.27 Aligned_cols=94 Identities=13% Similarity=0.130 Sum_probs=59.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 270 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvi 270 (361)
++++||=+|+|. |..++.+++.....+|+++|.+++..+.++ +.+.+.+ .....+ ..+ + ...+.+|+|+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~~-~--~~~~~fD~I~ 114 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AED-F--QHEEQFDVIT 114 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hhh-c--cccCCccEEE
Confidence 378999999865 566666666554348999999998766654 3555332 111222 211 1 1124799998
Q ss_pred EccC--ChHHHHHHHHHhcCCCcEEEEE
Q 018072 271 ECTG--NIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 271 d~~g--~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
-..- -++.++.+.+.|+++ |+++..
T Consensus 115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 115 SRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 7531 234566778889998 998866
No 338
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.26 Score=43.70 Aligned_cols=103 Identities=17% Similarity=0.189 Sum_probs=60.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~----~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
++.+++|+|+ |++|...++.+...|. +++.+.++. ++.+ .+.+.+... .+..+-.+ ..+.+.+..... +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999999988998 666665543 2222 223334322 22222122 123333333221 3
Q ss_pred CccEEEEccCChH-------------------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072 265 GVDRSVECTGNID-------------------------NMISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 265 g~Dvvid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~ 299 (361)
++|++|.++|... ....+++.+... |+++.++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 7899999987411 123444556666 899888754
No 339
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.57 E-value=0.13 Score=50.36 Aligned_cols=105 Identities=15% Similarity=0.230 Sum_probs=65.3
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHH-cC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM-TN 263 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~-~~ 263 (361)
...++++|++||=+|+|+ |..++.+++..+..+|+++|.++++++.++ ++|....+.....+. . ..... ..
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~-~--~~~~~~~~ 307 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG-R--GPSQWAEN 307 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc-c--cccccccc
Confidence 445678999999988765 555556666555348999999999987764 367652221111110 0 00001 12
Q ss_pred CCccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072 264 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 264 ~g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+.||.|+- |+|. ...+..+++.|+++ |+++..-.
T Consensus 308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 36999885 3332 23667889999998 99886543
No 340
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.57 E-value=0.11 Score=45.05 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=60.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hh----HHHHHHcCCCEEEcCCCCCc
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KR----FEEAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~----~~~~~~~G~~~vv~~~~~~~ 252 (361)
..+|+|+|+|++|...+..+...|..++..+|.+. .| .+.+++++.+..+......
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~- 99 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDD- 99 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecC-
Confidence 46899999999999999999999998898887552 01 2224556655444322221
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCc-EEEEEcC
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG-VAVLVGV 298 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G-~iv~~g~ 298 (361)
+.+...++. .++|+|+++..+.+.....-+..... + .++..+.
T Consensus 100 -~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~ip~i~~~~ 143 (197)
T cd01492 100 -ISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GVKFYATGV 143 (197)
T ss_pred -ccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 111111221 26899999988766544444555544 4 3444443
No 341
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.084 Score=47.43 Aligned_cols=79 Identities=24% Similarity=0.309 Sum_probs=50.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC--EEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--DFVNTSEHD-RPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~--~vv~~~~~~-~~~~~~i~~~~~--~g~Dv 268 (361)
+.++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +... ..+..+-.+ ..+.+.+..... +++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999998 9999999888888898 89999998877665433 3211 122222222 113233333221 36899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
++.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9999874
No 342
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.56 E-value=0.22 Score=43.85 Aligned_cols=102 Identities=22% Similarity=0.185 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEc-------CCCCCcc-HHHHHHHHc-
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT- 262 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~-------~~~~~~~-~~~~i~~~~- 262 (361)
+.++.+||+.|+|. |.-++-+|. .|. .|+++|.++..++.+ ++.+...... +...+-+ +...+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999999976 777777774 688 899999999988875 3344321100 0000000 000111111
Q ss_pred --CCCccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 263 --NGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 263 --~~g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
.+.||.|+|..- -+..+....+.|+++ |++.+++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 136899999653 123577889999998 98776654
No 343
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.15 Score=45.15 Aligned_cols=79 Identities=11% Similarity=0.125 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--C-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--G- 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~- 264 (361)
.|.+++|+|+ +++|...+..+...|+ +|+.+++++++++.+. +.+.+. .+..+..+ ..+.+.+..... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 8999998888888899 8999999888765542 335432 22222222 123333333221 3
Q ss_pred CccEEEEccC
Q 018072 265 GVDRSVECTG 274 (361)
Q Consensus 265 g~Dvvid~~g 274 (361)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6899999986
No 344
>PRK08264 short chain dehydrogenase; Validated
Probab=95.54 E-value=0.066 Score=47.45 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCC-ccHHHHHHHHcCCCccEEEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHD-RPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~-~~~~~~i~~~~~~g~Dvvid 271 (361)
.+.+++|+|+ |.+|...++.+...|..+|+.+++++++.+. .+.. ..+..+-.+ .++.+.+... +.+|++|.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence 4578999987 9999999998888897679999888776543 3222 122222222 1122222221 25899999
Q ss_pred ccCC
Q 018072 272 CTGN 275 (361)
Q Consensus 272 ~~g~ 275 (361)
++|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9876
No 345
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.071 Score=48.76 Aligned_cols=80 Identities=21% Similarity=0.219 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ |++|...+..+...|+ +|+.+++++++++.+. ..+... .+..+-.+ .++.+.+..... +.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999998888999 8988988877665432 234332 12222122 123333333221 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|+++|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 346
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.54 E-value=0.11 Score=41.98 Aligned_cols=98 Identities=20% Similarity=0.300 Sum_probs=56.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHH----HHHcCC-CEEEcCCCCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEE----AKKFGV-TDFVNTSEHD 251 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~~----~~~~G~-~~vv~~~~~~ 251 (361)
..+|+|+|+|++|...+..+.+.|..+++.+|.+. .|.+. ++++.. .++..+...-
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 36899999999999999999899998898886542 12222 233332 2222211110
Q ss_pred ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcE-EEEEc
Q 018072 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV-AVLVG 297 (361)
Q Consensus 252 ~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~-iv~~g 297 (361)
-.+...++. .++|+||+|+.+........+.+... +. ++..+
T Consensus 82 --~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~ 124 (135)
T PF00899_consen 82 --DEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAG 124 (135)
T ss_dssp --SHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEE
T ss_pred --ccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence 012222222 36899999998866555555555554 44 34433
No 347
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.53 E-value=0.13 Score=47.61 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~ 230 (361)
.+.+++|+|+|++|.+++..+...|+++|+++.+++
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999998888889997799999986
No 348
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.094 Score=47.46 Aligned_cols=79 Identities=16% Similarity=0.257 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HHcCCCEE--EcCCCCCccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~-~~~G~~~v--v~~~~~~~~~~~~i~~~~~-- 263 (361)
.|.+++|+|+ + ++|.+.++.+...|+ +|+..+++++ ..+.+ .+.|.... .|..+.+ ++.+.+.....
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence 4678999988 4 799999888888898 7888877642 22222 22354332 2333322 24444443332
Q ss_pred CCccEEEEccCC
Q 018072 264 GGVDRSVECTGN 275 (361)
Q Consensus 264 ~g~Dvvid~~g~ 275 (361)
+.+|++++++|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 369999998873
No 349
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.082 Score=47.63 Aligned_cols=78 Identities=26% Similarity=0.336 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC-EEEcCCCCC-ccHHHHHHHHcCCCc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT-DFVNTSEHD-RPIQEVIAEMTNGGV 266 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~-~vv~~~~~~-~~~~~~i~~~~~~g~ 266 (361)
.+.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+.+ .+.. ..+..+-.+ ..+.+.+... +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence 3689999988 8999999998888899 89999998877655332 2322 222222222 1122222221 379
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|+++|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 350
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.52 E-value=0.076 Score=48.40 Aligned_cols=79 Identities=23% Similarity=0.328 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+... .+..+-.+ .++...+..... +.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999998888999 8999988876654432 233322 22222122 123333333222 37
Q ss_pred ccEEEEccC
Q 018072 266 VDRSVECTG 274 (361)
Q Consensus 266 ~Dvvid~~g 274 (361)
+|++|+++|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 899999987
No 351
>PRK08328 hypothetical protein; Provisional
Probab=95.51 E-value=0.073 Score=47.48 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=30.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
+.+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4689999999999999999999999899888754
No 352
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.082 Score=48.11 Aligned_cols=79 Identities=20% Similarity=0.388 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H---cC--CC-EEE--cCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FG--VT-DFV--NTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~---~G--~~-~vv--~~~~~~~~~~~~i~~~~~- 263 (361)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+... + .+ .. .++ |..+. ..+.+.+.....
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE-DQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH-HHHHHHHHHHHHH
Confidence 3679999998 9999999999988999 8999988877654332 2 11 11 122 22221 123333333322
Q ss_pred -CCccEEEEccCC
Q 018072 264 -GGVDRSVECTGN 275 (361)
Q Consensus 264 -~g~Dvvid~~g~ 275 (361)
+++|++|+++|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 368999999873
No 353
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.49 E-value=0.088 Score=46.74 Aligned_cols=80 Identities=20% Similarity=0.221 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv 268 (361)
++.+++|+|+ |.+|...+..+...|. .|+..+++.++++.+. +++... .+..+-.+ ..+.+.+.+... +++|+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999997 9999999998888898 8888888877766543 344322 22222111 123333332221 36899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+|+++|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999874
No 354
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.49 E-value=0.13 Score=46.98 Aligned_cols=99 Identities=19% Similarity=0.131 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-------EEEcCCCCCccHHHHHHHHcCCCc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-------DFVNTSEHDRPIQEVIAEMTNGGV 266 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-------~vv~~~~~~~~~~~~i~~~~~~g~ 266 (361)
+.+++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. .-++....+ ..+.++.. .+.+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D--~~~~l~~~-~~~y 146 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDD--GFKFLADT-ENTF 146 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECc--hHHHHHhC-CCCc
Confidence 3456999998865 44555666665556899999999888877663110 001111112 33334332 3479
Q ss_pred cEEEEccC----------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072 267 DRSVECTG----------NIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 267 Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
|+|+-... ..+.++.+.+.|+++ |.++...
T Consensus 147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 99986443 234567888999998 9998774
No 355
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.49 E-value=0.097 Score=47.32 Aligned_cols=96 Identities=23% Similarity=0.241 Sum_probs=68.3
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc-CCC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGG 265 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~-~~g 265 (361)
......+++.+||=+|+|. |..+..+++.. +. +|+++|.+++-++.+++.+.+.+. .+ .. .+. .+.
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~~----~~~~~~~ 89 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--VR----DWKPKPD 89 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--hh----hCCCCCC
Confidence 4556678889999999876 67777787775 44 899999999999988876654322 11 11 122 237
Q ss_pred ccEEEEccC-----C-hHHHHHHHHHhcCCCcEEEEE
Q 018072 266 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 266 ~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 296 (361)
||+|+.... . ...+..+.+.|+++ |++++.
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999998542 2 34577888999997 998765
No 356
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.47 E-value=0.081 Score=50.83 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
...+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999999999887
No 357
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.47 E-value=0.1 Score=47.70 Aligned_cols=94 Identities=21% Similarity=0.198 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc---CCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~---G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv 268 (361)
...+.+++|+|+|++|.+.+..+...|. +|+++++++++.+.+. ++ +....+. ..+ .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccE
Confidence 3457899999999999999988888897 8999999988765543 33 2111111 111 11126899
Q ss_pred EEEccCChH--HH---HHHHHHhcCCCcEEEEEcCC
Q 018072 269 SVECTGNID--NM---ISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 269 vid~~g~~~--~~---~~~~~~l~~~~G~iv~~g~~ 299 (361)
||++++... .. ......++++ ..++.+...
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~ 216 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYN 216 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccC
Confidence 999987521 11 1123456665 666666543
No 358
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.46 E-value=0.12 Score=45.90 Aligned_cols=74 Identities=27% Similarity=0.391 Sum_probs=55.2
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH--cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK--FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~--~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~ 275 (361)
+++|+|+|.+|...++.+...|. .|++++.++++.+...+ ++.. ++.-+..+ .+.+++.--..+|+++-++|+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~---~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATD---EDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence 58899999999999999999998 89999999999887433 5543 33333332 234555433379999999998
Q ss_pred h
Q 018072 276 I 276 (361)
Q Consensus 276 ~ 276 (361)
.
T Consensus 77 d 77 (225)
T COG0569 77 D 77 (225)
T ss_pred C
Confidence 3
No 359
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.45 E-value=0.1 Score=47.16 Aligned_cols=99 Identities=22% Similarity=0.227 Sum_probs=66.8
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCCc
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV 266 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~ 266 (361)
.....++++++||=+|+|. |..+..+++..+..+|+++|.+++.++.+++.-.. .++.. + ..+. .....+
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~---d--~~~~---~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA---D--IASW---QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC---c--hhcc---CCCCCc
Confidence 3455678899999999875 67777888776544999999999988888764321 12211 1 1100 122378
Q ss_pred cEEEEccC------ChHHHHHHHHHhcCCCcEEEEE
Q 018072 267 DRSVECTG------NIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 267 Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
|+|+.... ....+..+.+.|+++ |.+++.
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 99986543 224677888999997 998875
No 360
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.45 E-value=0.098 Score=46.94 Aligned_cols=80 Identities=23% Similarity=0.317 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ..+... .+..+-.+ ..+.+.+..... ++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999988 9999999998888898 8999999877655432 223322 22222222 123333333222 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|+++++.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 8999999974
No 361
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.09 Score=46.92 Aligned_cols=77 Identities=26% Similarity=0.452 Sum_probs=49.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c--CCC-EEE--cCCCCCccHHHHHHHHcC--
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVT-DFV--NTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~--G~~-~vv--~~~~~~~~~~~~i~~~~~-- 263 (361)
+.+++|+|+ |++|...++.+...|. +|+.+++++++.+.+.+ . +.. +++ |..+. ..+.+.+..+..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH-DQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 468999987 9999998888778887 89999898877655432 1 222 122 22222 123333333322
Q ss_pred CCccEEEEccC
Q 018072 264 GGVDRSVECTG 274 (361)
Q Consensus 264 ~g~Dvvid~~g 274 (361)
+++|++|+++|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37899999987
No 362
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.43 E-value=0.09 Score=46.89 Aligned_cols=79 Identities=22% Similarity=0.258 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
++.++||+|+ |.+|...++.+...|. +|+.++++.++.+.+.+ .+... ++..+-.+ ..+.+.+..... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999998 9999999998888898 89999888876554432 23222 22222222 123333333322 36
Q ss_pred ccEEEEccC
Q 018072 266 VDRSVECTG 274 (361)
Q Consensus 266 ~Dvvid~~g 274 (361)
+|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999997
No 363
>PLN02823 spermine synthase
Probab=95.43 E-value=0.15 Score=47.99 Aligned_cols=98 Identities=14% Similarity=0.133 Sum_probs=62.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC-C-EEE-----cCCCCCccHHHHHHHHcCCCcc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-T-DFV-----NTSEHDRPIQEVIAEMTNGGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~-~-~vv-----~~~~~~~~~~~~i~~~~~~g~D 267 (361)
...+|||+|+|. |..+..+++..+..+|++++.+++-.+.++++-. . ..+ .....| ..+.++. .++.||
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~D--a~~~L~~-~~~~yD 178 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIND--ARAELEK-RDEKFD 178 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEECh--hHHHHhh-CCCCcc
Confidence 447899998864 5556677776666799999999999999987421 1 001 111111 3334432 334899
Q ss_pred EEEEccCC------------hHHHH-HHHHHhcCCCcEEEEEc
Q 018072 268 RSVECTGN------------IDNMI-SAFECVHDGWGVAVLVG 297 (361)
Q Consensus 268 vvid~~g~------------~~~~~-~~~~~l~~~~G~iv~~g 297 (361)
+||--+.. .+.++ .+.+.|+++ |.++.-.
T Consensus 179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EEEecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 99875322 12455 678899998 9887653
No 364
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.16 Score=44.46 Aligned_cols=74 Identities=19% Similarity=0.185 Sum_probs=46.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCC--CccEEEEc
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVEC 272 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~--g~Dvvid~ 272 (361)
.++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ ....+++..+-.+ . +.+.++..+ +.|.+|++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~-~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD--P-EAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC--H-HHHHHHHHhcCCCCEEEEC
Confidence 57999987 99999888866666 6 89999998877665543 2112223222222 1 233333322 69999999
Q ss_pred cCC
Q 018072 273 TGN 275 (361)
Q Consensus 273 ~g~ 275 (361)
+|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 874
No 365
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.2 Score=45.80 Aligned_cols=76 Identities=26% Similarity=0.379 Sum_probs=48.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-E--EcCCCCCccHHHHHHHHc-CCCccE
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT-NGGVDR 268 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-v--v~~~~~~~~~~~~i~~~~-~~g~Dv 268 (361)
.+++|+|+|++|...+..+. .|. +|+.+++++++++.+. ..|... . .|..+.+ ++.+.+.... .+++|+
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVTG 79 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCCE
Confidence 56788899999999888774 787 8999999877665432 234322 2 2333322 2333333331 137999
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+|+++|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999984
No 366
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.42 E-value=0.058 Score=45.19 Aligned_cols=47 Identities=28% Similarity=0.309 Sum_probs=39.9
Q ss_pred CCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072 195 RGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (361)
Q Consensus 195 ~g~~VlI~G~g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~ 242 (361)
.|..|++.|+| ++|...++-+...|+ +|+++.++++.+..+.+.-..
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~ 53 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPS 53 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCc
Confidence 47788999984 999999999999999 999999999988887665443
No 367
>PRK09242 tropinone reductase; Provisional
Probab=95.42 E-value=0.083 Score=47.49 Aligned_cols=79 Identities=19% Similarity=0.284 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCCE-EE--cCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-FV--NTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~~-vv--~~~~~~~~~~~~i~~~~~- 263 (361)
.+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ + +... .+ |..+. .++.+.+.....
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD-EDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHHHH
Confidence 4779999988 8999999999888998 89999898877655432 1 2222 12 22222 123333333221
Q ss_pred -CCccEEEEccCC
Q 018072 264 -GGVDRSVECTGN 275 (361)
Q Consensus 264 -~g~Dvvid~~g~ 275 (361)
+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 378999999984
No 368
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.42 E-value=0.065 Score=44.56 Aligned_cols=79 Identities=28% Similarity=0.344 Sum_probs=49.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 265 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~--~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g 265 (361)
++++|+|+ +++|...++.+...|..+|+.+.++ .++.+.+ +..+... ++..+-.+ .++.+.+.... .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36899987 9999998888877777688999888 4443333 3345322 22222222 22344444333 237
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 8999999885
No 369
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.41 E-value=0.083 Score=48.30 Aligned_cols=80 Identities=28% Similarity=0.337 Sum_probs=53.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC------EEEcCCCCCccHHHHHH---
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHDRPIQEVIA--- 259 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~------~vv~~~~~~~~~~~~i~--- 259 (361)
-.|..++|+|+ .++|.+.+..+...|+ +|+.+++++++.+...+ .+.. .+.|....+ +..+.+.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~l~~~~~ 83 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEV-DVEKLVEFAV 83 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH-HHHHHHHHHH
Confidence 35788899987 8999999999999999 99999999988666543 2332 122222221 1222222
Q ss_pred HHcCCCccEEEEccCC
Q 018072 260 EMTNGGVDRSVECTGN 275 (361)
Q Consensus 260 ~~~~~g~Dvvid~~g~ 275 (361)
+...++.|+.+++.|.
T Consensus 84 ~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGA 99 (270)
T ss_pred HHhCCCCCEEEEcCCc
Confidence 2223579999998874
No 370
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.41 E-value=0.28 Score=46.01 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=33.7
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~ 236 (361)
.+|.|+|+|.+|...++.+...|. .|+..|.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999999888888999 999999998765543
No 371
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.41 E-value=0.21 Score=44.24 Aligned_cols=103 Identities=19% Similarity=0.261 Sum_probs=62.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHHH----HHcCCCEEEcCCCCCc
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEEA----KKFGVTDFVNTSEHDR 252 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~~~----~~~G~~~vv~~~~~~~ 252 (361)
..+|+|+|.|+||..++..+.+.|..++..+|-+. .|.+.+ ++.+...-+...+ +.
T Consensus 30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-~f 108 (263)
T COG1179 30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-DF 108 (263)
T ss_pred hCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH-hh
Confidence 46899999999999999999999998888886543 122222 2222222111111 11
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHHHHHHHH-HhcCCCcEEEEEcCCC
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFE-CVHDGWGVAVLVGVPS 300 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~-~l~~~~G~iv~~g~~~ 300 (361)
-..+.+.++...++|.|+|+.-+-..=...+. +.+.. =.++..+...
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 12345556666689999999976444334444 44443 4555555433
No 372
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.40 E-value=0.16 Score=48.39 Aligned_cols=35 Identities=31% Similarity=0.356 Sum_probs=31.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~ 230 (361)
..+|+|+|+|++|..+++.+.+.|..+++.+|.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 46899999999999999999999999999987764
No 373
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.074 Score=46.95 Aligned_cols=73 Identities=23% Similarity=0.286 Sum_probs=48.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCC-CccEEEEc
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC 272 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~ 272 (361)
+.+++|+|+ |++|...++.+...|. +|+.+++++++ .+... ...|..+.+ .+.+.+...... +.|++|.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIE-QTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEEC
Confidence 578999988 9999999998888898 89999887664 11211 122332221 233344443333 68999998
Q ss_pred cCC
Q 018072 273 TGN 275 (361)
Q Consensus 273 ~g~ 275 (361)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
No 374
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.38 E-value=0.11 Score=47.01 Aligned_cols=80 Identities=18% Similarity=0.268 Sum_probs=48.0
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChhh---HHHHH-HcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKR---FEEAK-KFGVTDFVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~~---~~~~~-~~G~~~vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
.+.++||+|+ +++|.+.++.+...|+ +|+.+.++++. ++.+. +.|....+..+-.+ +++.+.+..... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4678999984 5899999998888999 78877655432 22222 23432222222222 224334433322 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++++++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999999874
No 375
>PRK06398 aldose dehydrogenase; Validated
Probab=95.38 E-value=0.055 Score=48.90 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~--~g~Dvvi 270 (361)
.|.++||+|+ +++|...+..+...|+ +|+.+++++++.. ... ...|..+.+ ++.+.+..... +.+|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 3679999998 8999999999988998 8998888765432 111 112333321 23334443322 3689999
Q ss_pred EccCC
Q 018072 271 ECTGN 275 (361)
Q Consensus 271 d~~g~ 275 (361)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98873
No 376
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.1 Score=47.58 Aligned_cols=77 Identities=17% Similarity=0.256 Sum_probs=49.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC--C-EEE--cCCCCCccHHHHHHHHcC--
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DFV--NTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~--~-~vv--~~~~~~~~~~~~i~~~~~-- 263 (361)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+. . ..+ |..+.+ ++.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQN-SIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHH-HHHH-HHHHHHhc
Confidence 567999998 9999999998888898 89999888776654432 222 1 122 222221 2333 333322
Q ss_pred CCccEEEEccCC
Q 018072 264 GGVDRSVECTGN 275 (361)
Q Consensus 264 ~g~Dvvid~~g~ 275 (361)
+++|+++.++|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 368999999874
No 377
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.33 E-value=0.11 Score=48.44 Aligned_cols=102 Identities=17% Similarity=0.100 Sum_probs=67.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHH-HcC---CCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAK-KFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~-~~G---~~~vv~~~~~~~~~~~~i~~~~~~g~Dv 268 (361)
....+++|+|+|..|.+.++.+.. .+.++|.+.++++++.+.+. ++. .... . .+ ..+.+ .++|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence 456789999999999998887754 67778999999988766543 342 2211 1 11 33333 26899
Q ss_pred EEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh
Q 018072 269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 310 (361)
Q Consensus 269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~ 310 (361)
|+.++.+...+-.. .++++ --++.+|... +..-.+++.
T Consensus 192 VitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~-p~~~El~~~ 229 (304)
T PRK07340 192 VVTATTSRTPVYPE--AARAG-RLVVAVGAFT-PDMAELAPR 229 (304)
T ss_pred EEEccCCCCceeCc--cCCCC-CEEEecCCCC-CCcccCCHH
Confidence 99999886654444 36775 6778888655 333444444
No 378
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.31 E-value=0.096 Score=50.40 Aligned_cols=96 Identities=24% Similarity=0.322 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
.+.++||+|+|-+|.+++..+...|...|+..-|+.+|.+. ++++|+.. +. +.+....+ ..+|+||.++
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~-------l~el~~~l--~~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VA-------LEELLEAL--AEADVVISST 246 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ec-------HHHHHHhh--hhCCEEEEec
Confidence 67899999999999999999999998899999998887654 56788432 22 21111112 1589999999
Q ss_pred CChHHH---HHHHHHhcCCCc-EEEEEcCCC
Q 018072 274 GNIDNM---ISAFECVHDGWG-VAVLVGVPS 300 (361)
Q Consensus 274 g~~~~~---~~~~~~l~~~~G-~iv~~g~~~ 300 (361)
+.+..+ ....+.++.... -++.++.+.
T Consensus 247 sa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 247 SAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred CCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 886632 344445554313 355666654
No 379
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.29 E-value=0.12 Score=46.49 Aligned_cols=80 Identities=21% Similarity=0.304 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~D 267 (361)
.|.++||+|+ |++|...++.+...|+ +|+.+++++. ..+.+++++... .+..+-.+ .++.+.+.+... +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3679999988 8999999998888898 8888766542 233344444322 22222222 123333333222 3789
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++|+++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999874
No 380
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.12 Score=46.40 Aligned_cols=80 Identities=19% Similarity=0.257 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE----EAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~----~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
.+.++||+|+ +++|...++.+...|+ +|+.++++++ ..+ .+++.+... .+..+-.+ ..+.+.+..... +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 8999999998888998 8888887653 222 223334322 22222222 123333333221 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|++|++.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 381
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.26 E-value=0.13 Score=46.34 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=49.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC--EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT--DFVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~--~vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ .+.. ..+..+-.+ .++...+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999988 8999999998888898 89999888766544321 2211 222222222 123333333221 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|+++++.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 78999999873
No 382
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.24 E-value=0.3 Score=41.85 Aligned_cols=101 Identities=18% Similarity=0.182 Sum_probs=65.0
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
.....+.++++||=+|+|. |..++.+++.....+|+++|.+++.++.+++ ++...+- ....+ ... ...
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~-~~~~d--~~~----~~~ 95 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNID-IIPGE--API----ELP 95 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeE-EEecC--chh----hcC
Confidence 3455677889999998865 6677777776543489999999988777754 4433211 11111 111 112
Q ss_pred CCccEEEEccC---ChHHHHHHHHHhcCCCcEEEEEc
Q 018072 264 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 264 ~g~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
+.+|+|+.... -...+..+.+.|+++ |++++..
T Consensus 96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 37999986432 123567888999997 9987753
No 383
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.24 E-value=0.14 Score=43.52 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=29.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~ 230 (361)
+|+|+|+|++|...++.+.+.|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999899998899998875
No 384
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.24 E-value=0.17 Score=42.17 Aligned_cols=84 Identities=17% Similarity=0.156 Sum_probs=56.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC------EEEcCC-CCCccHHHHHHHHcCCCccEEE
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT------DFVNTS-EHDRPIQEVIAEMTNGGVDRSV 270 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~------~vv~~~-~~~~~~~~~i~~~~~~g~Dvvi 270 (361)
+|.|+|+|..|.+.+..+...|. +|....++++..+.+++-+.. ..+... ....++.+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 58899999999999999999997 999999999888877663321 101100 0001133333 3579999
Q ss_pred EccCChHHHHHHHHHhcC
Q 018072 271 ECTGNIDNMISAFECVHD 288 (361)
Q Consensus 271 d~~g~~~~~~~~~~~l~~ 288 (361)
-++.+ ...+..++.+++
T Consensus 75 iavPs-~~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPS-QAHREVLEQLAP 91 (157)
T ss_dssp E-S-G-GGHHHHHHHHTT
T ss_pred ecccH-HHHHHHHHHHhh
Confidence 99988 667777777776
No 385
>PRK06720 hypothetical protein; Provisional
Probab=95.23 E-value=0.18 Score=42.64 Aligned_cols=80 Identities=21% Similarity=0.177 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g 265 (361)
.+.+++|+|+ +++|...+..+...|+ +|+.++++++..+.. .+.+... .+..+..+ ..+.+.+.... -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999988 7999999888888898 899998887655332 2234332 22222222 11333332221 136
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++++++|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8999988874
No 386
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.22 E-value=0.12 Score=46.32 Aligned_cols=79 Identities=22% Similarity=0.338 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~ 264 (361)
++.+++|+|+ |++|...+..+...|+ +|+.+++++++++.+ ++.+... .+ |..+.+ .+...+..... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEE-AVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence 4789999988 9999999988888898 899999987765443 2334322 22 222211 23333333222 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|++|.++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999999884
No 387
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.22 E-value=0.012 Score=48.61 Aligned_cols=93 Identities=22% Similarity=0.239 Sum_probs=56.0
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC----CccHHHHHHHHcCCCccEEEEccC
Q 018072 199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~----~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
|+|+|+|.+|.+.+..++..|. .|..+.+.+ +.+.+++.|........+. ....... ....+.+|+||-|+=
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877888 899998888 7777777665432221000 0000000 112237999999986
Q ss_pred ChHHHHHHHHHhc----CCCcEEEEEc
Q 018072 275 NIDNMISAFECVH----DGWGVAVLVG 297 (361)
Q Consensus 275 ~~~~~~~~~~~l~----~~~G~iv~~g 297 (361)
.. ..+.+++.++ ++ ..++++-
T Consensus 77 a~-~~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 77 AY-QLEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp GG-GHHHHHHHHCTGEETT-EEEEEES
T ss_pred cc-chHHHHHHHhhccCCC-cEEEEEe
Confidence 63 3344444444 44 4666553
No 388
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.21 E-value=0.21 Score=50.73 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=64.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~ 276 (361)
++++|+|.|.+|+..++.++..|. .++++|.++++.+.+++.|...++-. ..+ .+.+++..-+.+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~~~---~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-AAN---EEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-CCC---HHHHHhcCccccCEEEEEcCCh
Confidence 688999999999999999999998 89999999999999999887655432 222 2233333223789888777664
Q ss_pred HH---HHHHHHHhcCCCcEEEE
Q 018072 277 DN---MISAFECVHDGWGVAVL 295 (361)
Q Consensus 277 ~~---~~~~~~~l~~~~G~iv~ 295 (361)
+. +-.+.+...+. -+++.
T Consensus 493 ~~~~~iv~~~~~~~~~-~~iia 513 (558)
T PRK10669 493 YEAGEIVASAREKRPD-IEIIA 513 (558)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 33 22334444444 44443
No 389
>PRK04266 fibrillarin; Provisional
Probab=95.19 E-value=0.2 Score=44.47 Aligned_cols=102 Identities=16% Similarity=0.156 Sum_probs=62.1
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC--C--EEEcCCCCCccHHHHHHHHcCC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T--DFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~--~--~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
+...+++|++||=+|+|. |..+..+++..+..+|+++|.+++.++.+.+... . ..+.-+..+ .. ....+. +
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~--~~-~~~~l~-~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARK--PE-RYAHVV-E 140 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCC--cc-hhhhcc-c
Confidence 457889999999998864 4455566666543489999999987765533211 1 112111111 00 001111 3
Q ss_pred CccEEEEccCChH----HHHHHHHHhcCCCcEEEEE
Q 018072 265 GVDRSVECTGNID----NMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 265 g~Dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~ 296 (361)
.+|+|+.....+. .+..+.+.|+++ |++++.
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999996554432 357888899997 998874
No 390
>PRK06484 short chain dehydrogenase; Validated
Probab=95.17 E-value=0.11 Score=52.16 Aligned_cols=79 Identities=27% Similarity=0.403 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE---EEcCCCCCccHHHHHHHHcC--CCcc
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~---vv~~~~~~~~~~~~i~~~~~--~g~D 267 (361)
.+.++||+|+ +++|...++.+...|+ +|+.++++.++++.+. +++... ..|..+. .++.+.+..... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDE-AQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence 5788999988 8999999999989998 8999999888776553 455432 2333322 224444433322 3799
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++|+++|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
No 391
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.17 E-value=0.061 Score=46.62 Aligned_cols=99 Identities=15% Similarity=0.126 Sum_probs=59.8
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
.+.....++.+||-+|+|. |..+..+++ .|. .|+++|.+++-++.+++ .+... .....+ +.. . .+ +
T Consensus 23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~~~d--~~~-~-~~-~ 92 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPL--RTDAYD--INA-A-AL-N 92 (195)
T ss_pred HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCc--eeEecc--chh-c-cc-c
Confidence 3344445567899999865 666666665 476 89999999987776543 23321 111111 110 0 11 2
Q ss_pred CCccEEEEcc-----CC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072 264 GGVDRSVECT-----GN---IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 264 ~g~Dvvid~~-----g~---~~~~~~~~~~l~~~~G~iv~~g 297 (361)
+.+|+|+.+. .. +..+..+.+.|+++ |.++.+.
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 3699998642 11 24677888899998 9865553
No 392
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.16 E-value=0.055 Score=51.28 Aligned_cols=77 Identities=13% Similarity=0.029 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--CE-EEcCCCCCccHHHHHHHHcCC-CccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TD-FVNTSEHDRPIQEVIAEMTNG-GVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~--~~-vv~~~~~~~~~~~~i~~~~~~-g~Dv 268 (361)
.|.+|||+|+ |.+|...++.+...|. +|+++++++...... ..++. .. .+..+-.+ .+.+..+..+ ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---AAKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---HHHHHHHHhhcCCCE
Confidence 4678999987 9999999999988998 899888776543221 22221 11 12111112 1233333333 6899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
||++++.
T Consensus 79 vih~A~~ 85 (349)
T TIGR02622 79 VFHLAAQ 85 (349)
T ss_pred EEECCcc
Confidence 9999873
No 393
>PLN02244 tocopherol O-methyltransferase
Probab=95.16 E-value=0.12 Score=49.05 Aligned_cols=98 Identities=20% Similarity=0.207 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 269 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv 269 (361)
+++++||=+|+|. |..+..+++..|+ +|+++|.++...+.+++ .|...-+.....+ ..+ + .+.++.||+|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~-~-~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN-Q-PFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc-C-CCCCCCccEE
Confidence 7889999999865 6677778887787 99999999987776654 2332111111111 000 0 1223479999
Q ss_pred EEccC------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 270 VECTG------NIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 270 id~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+..-. ....+..+.+.|+++ |++++...
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 86432 124677889999998 99988754
No 394
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.15 E-value=0.22 Score=44.40 Aligned_cols=75 Identities=25% Similarity=0.290 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRS 269 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvv 269 (361)
.+.++||+|+ |.+|...+..+...|. +|++++++. ....+... .+..+-.+ ..+.+.+..... +.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3678999988 8999999998888898 899988876 12222221 22111111 123333333222 368999
Q ss_pred EEccCC
Q 018072 270 VECTGN 275 (361)
Q Consensus 270 id~~g~ 275 (361)
|++.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999875
No 395
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.19 Score=44.67 Aligned_cols=75 Identities=13% Similarity=0.172 Sum_probs=48.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EE--EcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~v--v~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
.+++|+|+ |++|...+..+...|+ +|+++++++++++.+.+.+.. .. .|..+. .++.+.+.... ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDH-PGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH-HHHHHHHHhcc-cCCCEEEEc
Confidence 46899987 9999988887778898 899999999888776554321 22 222221 12333333321 246777766
Q ss_pred cC
Q 018072 273 TG 274 (361)
Q Consensus 273 ~g 274 (361)
+|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 65
No 396
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.15 E-value=0.12 Score=45.83 Aligned_cols=79 Identities=19% Similarity=0.353 Sum_probs=50.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV 266 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~ 266 (361)
+.+++|+|+ |++|...+..+...|. +|+.+++++++.+.+ +..+... ++..+-.+ ..+.+.++.... +++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 578999987 8999999988888898 899999987765543 2233222 22222222 123333333222 378
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
No 397
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=95.14 E-value=0.38 Score=44.30 Aligned_cols=109 Identities=13% Similarity=0.057 Sum_probs=71.9
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC---C--CEEEcCCCCC--ccHHHHHHHHcCC
Q 018072 193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---V--TDFVNTSEHD--RPIQEVIAEMTNG 264 (361)
Q Consensus 193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G---~--~~vv~~~~~~--~~~~~~i~~~~~~ 264 (361)
.-++..|+|+|+ ++.|...+.-+...|. +|++..-+++..+.++..- - +...|...++ .+..+.+++..++
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 345667999999 9999999999999999 8888877777666654421 1 1234433332 2344555555555
Q ss_pred -CccEEEEccCCh--------------------------HHHHHHHHHhcCCCcEEEEEcCCCCC
Q 018072 265 -GVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPSKD 302 (361)
Q Consensus 265 -g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~~~~ 302 (361)
+.--+++++|-. ..-...+.++++..||++.++...+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 889999999821 11124445666545999999876543
No 398
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.13 E-value=0.21 Score=43.42 Aligned_cols=34 Identities=35% Similarity=0.476 Sum_probs=30.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
..+|+|+|+|++|...++.+.+.|..+++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3679999999999999999999999889999887
No 399
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.12 E-value=0.12 Score=46.24 Aligned_cols=77 Identities=30% Similarity=0.394 Sum_probs=50.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EE--cCCCCCccHHHHHHHHc--CCCc
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NGGV 266 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv--~~~~~~~~~~~~i~~~~--~~g~ 266 (361)
.++||+|+ |.+|...+..+...|. +|+++++++++.+.+.+ .+... .+ |..+.+ ++.+.+.... .++.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKED-EIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHhcCCC
Confidence 57999998 9999999988888898 89999998877655543 23221 12 222211 2333333322 1368
Q ss_pred cEEEEccCC
Q 018072 267 DRSVECTGN 275 (361)
Q Consensus 267 Dvvid~~g~ 275 (361)
|++|.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999998864
No 400
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.11 E-value=0.13 Score=46.39 Aligned_cols=79 Identities=27% Similarity=0.331 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~----~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+++++ +.+. ..+.+... .+..+-.+ ..+.+.+.+... ++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999998888999 888887773 3222 22334322 22222222 123333333322 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 401
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.19 Score=44.66 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=48.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c-CCC-EEEcCCCCC-ccHHHHHHHHcCCCccE
Q 018072 197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F-GVT-DFVNTSEHD-RPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~-G~~-~vv~~~~~~-~~~~~~i~~~~~~g~Dv 268 (361)
.+++|+|+ |++|...++.+...|. +|+++++++++.+.+.+ . +.. +++..+-.+ .++.+.+.... ..+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCE
Confidence 47899987 9999999998888898 89999999877654322 1 111 122222122 11333333322 25799
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
++.++|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988764
No 402
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.10 E-value=0.081 Score=42.42 Aligned_cols=79 Identities=24% Similarity=0.333 Sum_probs=49.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
--+|-|+|+|.+|......+...|. .|..+. ++.++.+.+.. ++...+.+..+ .. ...|++|-++
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav 76 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV 76 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence 4589999999999999999999998 787774 45555555554 34333332211 11 2589999999
Q ss_pred CChHHHHHHHHHhcC
Q 018072 274 GNIDNMISAFECVHD 288 (361)
Q Consensus 274 g~~~~~~~~~~~l~~ 288 (361)
.. +.+....+.|..
T Consensus 77 pD-daI~~va~~La~ 90 (127)
T PF10727_consen 77 PD-DAIAEVAEQLAQ 90 (127)
T ss_dssp -C-CHHHHHHHHHHC
T ss_pred ch-HHHHHHHHHHHH
Confidence 88 677777777764
No 403
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.10 E-value=0.18 Score=46.02 Aligned_cols=82 Identities=22% Similarity=0.286 Sum_probs=50.5
Q ss_pred CCCCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcC-
Q 018072 193 PERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTN- 263 (361)
Q Consensus 193 ~~~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~---~~~~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~- 263 (361)
+-.+.++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++++.+ ++++....+..+-.+ .+..+.+..+..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 345688999986 5899999998888999 888776653 333333 334532222222222 223333333322
Q ss_pred -CCccEEEEccCC
Q 018072 264 -GGVDRSVECTGN 275 (361)
Q Consensus 264 -~g~Dvvid~~g~ 275 (361)
+.+|++++++|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 378999999873
No 404
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=95.10 E-value=0.64 Score=42.31 Aligned_cols=102 Identities=20% Similarity=0.263 Sum_probs=64.0
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
...+++|++||=+|+|+ |..++.++..++ ...|+++|.++++++.+++ +|.+.+.. ...+ .. .+.. ..+
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~-~~~D--~~-~~~~-~~~ 139 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAV-TNFD--GR-VFGA-AVP 139 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEE-ecCC--HH-Hhhh-hcc
Confidence 34678999988888765 555555666553 2489999999999877743 66654222 2222 11 1111 123
Q ss_pred CccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072 265 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 265 g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
.||+|+- |+|. .+.+..+++.++++ |+++....
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc 200 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC 200 (264)
T ss_pred CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence 5999875 2332 12567888899997 99876543
No 405
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.10 E-value=0.35 Score=42.10 Aligned_cols=98 Identities=19% Similarity=0.201 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHH-HcCCCccEE
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRS 269 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~-~~~~g~Dvv 269 (361)
++.+||-+|+|. |..+..+++.....+|+++|.+++..+.+++ .+...+ .....+ ..+.+.. +.++.+|.|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLCGD--AVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEecC--HHHHHHHHcCccccceE
Confidence 678899999876 7777777777644489999999998888754 343322 112222 3123322 223478988
Q ss_pred EEccC--------------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072 270 VECTG--------------NIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 270 id~~g--------------~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
+-... .+..+..+.+.|+++ |.+++..
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 86432 235688889999997 9998764
No 406
>PRK07574 formate dehydrogenase; Provisional
Probab=95.09 E-value=0.13 Score=49.49 Aligned_cols=45 Identities=24% Similarity=0.381 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G 240 (361)
.|.+|.|+|.|.+|...++.++..|. +|++++++....+..+.+|
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 56799999999999999999999999 9999998764333333344
No 407
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.06 E-value=0.13 Score=44.05 Aligned_cols=39 Identities=36% Similarity=0.422 Sum_probs=32.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 237 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~ 237 (361)
+|.|+|+|.+|...++++...|. +|+.++.+++.++.+.
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence 58899999999998888888898 9999999998776653
No 408
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.03 E-value=0.5 Score=42.06 Aligned_cols=102 Identities=18% Similarity=0.172 Sum_probs=59.3
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhH----HHHHHcCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~----~~~~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~ 264 (361)
+.++||+|+ |++|...++-+...|+ +|+.+.+ +.++. +.+++.+... .+ |..+.+ .+...+..... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence 578999988 8999998888878898 6655543 32322 2233344332 22 222211 13223333221 3
Q ss_pred CccEEEEccCC----------hH---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072 265 GVDRSVECTGN----------ID---------------NMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 265 g~Dvvid~~g~----------~~---------------~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
++|++|.++|. .+ ..+.+.+.++.. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 78999999973 11 123445566676 8999987654
No 409
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.02 E-value=0.17 Score=52.03 Aligned_cols=81 Identities=14% Similarity=0.275 Sum_probs=60.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~ 275 (361)
.++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...++ -+..+ .+.+++..-+.+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATR---MDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCC---HHHHHhcCCCcCCEEEEEeCC
Confidence 3689999999999999999999998 899999999999999998875433 22222 223333322378999999988
Q ss_pred hHHHHH
Q 018072 276 IDNMIS 281 (361)
Q Consensus 276 ~~~~~~ 281 (361)
++.-..
T Consensus 475 ~~~n~~ 480 (621)
T PRK03562 475 PQTSLQ 480 (621)
T ss_pred HHHHHH
Confidence 654333
No 410
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.01 E-value=0.16 Score=45.18 Aligned_cols=80 Identities=23% Similarity=0.239 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.++||+|+ |.+|...+..+...|. +|++++++.++...+ +..+... ++..+-.+ ..+.+.+..... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999997 9999999988888898 899999986554332 2233322 22222222 123333332221 26
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|++.+.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999999864
No 411
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.01 E-value=0.19 Score=45.63 Aligned_cols=78 Identities=23% Similarity=0.344 Sum_probs=47.8
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHHH-cCCCEEE--cCCCCCccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDFV--NTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~g---~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~~~-~G~~~vv--~~~~~~~~~~~~i~~~~~-- 263 (361)
.|.++||+|++ ++|.+.++.+...|+ +|+.+++++. ..+.+.. .+....+ |..+. .++.+.+.....
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAED-ASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCH-HHHHHHHHHHHhhc
Confidence 46789999873 899998888888898 7888877632 2222222 2322222 32222 224444444332
Q ss_pred CCccEEEEccC
Q 018072 264 GGVDRSVECTG 274 (361)
Q Consensus 264 ~g~Dvvid~~g 274 (361)
+.+|++|+++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36899999997
No 412
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.00 E-value=0.14 Score=45.93 Aligned_cols=80 Identities=18% Similarity=0.213 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.+++|+|+ +++|...+..+...|+ +|+.+++++++.+.+. +.+.+. .+..+-.+ ..+.+.+..... ++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3789999988 9999999998888898 7888888877655432 234322 22222222 123333333322 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++++++|.
T Consensus 89 ~d~li~~ag~ 98 (255)
T PRK06113 89 VDILVNNAGG 98 (255)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 413
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.98 E-value=0.15 Score=46.43 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=68.2
Q ss_pred hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCC
Q 018072 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG 265 (361)
Q Consensus 187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g 265 (361)
+....+++++.+||=+|+|. |..+..+++..+. +|++++.+++..+.+++.... ..+.....+ +.+ ..+.++.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~ 117 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT 117 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence 35667889999999999864 5556667776677 999999999988888763221 111111111 100 0112236
Q ss_pred ccEEEEcc-----C---ChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072 266 VDRSVECT-----G---NIDNMISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 266 ~Dvvid~~-----g---~~~~~~~~~~~l~~~~G~iv~~g~~ 299 (361)
||+|+..- . ....+..+.+.|+++ |++++....
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 99998621 1 123577888999998 999887543
No 414
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.18 Score=46.36 Aligned_cols=80 Identities=24% Similarity=0.285 Sum_probs=49.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh---------hhHHHH----HHcCCCE-EE--cCCCCCccHHH
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFEEA----KKFGVTD-FV--NTSEHDRPIQE 256 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~---------~~~~~~----~~~G~~~-vv--~~~~~~~~~~~ 256 (361)
-.+.++||+|+ +++|...++.+...|+ +|+.++++. ++++.+ ++.+... .+ |..+.+ ++.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWD-GAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHH-HHHH
Confidence 35789999988 8999999998888898 788876654 333322 2234332 22 222221 2333
Q ss_pred HHHHHcC--CCccEEEEccCC
Q 018072 257 VIAEMTN--GGVDRSVECTGN 275 (361)
Q Consensus 257 ~i~~~~~--~g~Dvvid~~g~ 275 (361)
.+..... +.+|++|+++|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 3333322 378999999874
No 415
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.93 E-value=0.23 Score=45.71 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=56.9
Q ss_pred CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 193 PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 193 ~~~g~~VlI~G~g~-vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
--.|.+|+|+|.|+ +|...+.++...|+ +|+.+.+.... +.+.+ ..+|+++.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEE
Confidence 35788999999976 99999999999999 88888652211 11111 25899999
Q ss_pred ccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 272 CTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
++|.+..+.. +.++++ ..++.+|...
T Consensus 209 AtG~~~~v~~--~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 209 AVGKPELIKK--DWIKQG-AVVVDAGFHP 234 (283)
T ss_pred ccCCCCcCCH--HHcCCC-CEEEEEEEee
Confidence 9998765443 568886 7888888544
No 416
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=94.88 E-value=0.43 Score=46.76 Aligned_cols=105 Identities=18% Similarity=0.253 Sum_probs=66.5
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
...++++|++||=+|+|+ |..+++++..++ ...|+++|.++++++.+++ +|.+.+. ....+ .. .+.....
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~-~~~~D--a~-~l~~~~~ 305 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIE-IKIAD--AE-RLTEYVQ 305 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEE-EEECc--hh-hhhhhhh
Confidence 345778999988888765 555666666662 3489999999999888754 6765421 11111 11 1111223
Q ss_pred CCccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcCC
Q 018072 264 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 264 ~g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~~ 299 (361)
+.||.|+- |+|. .+.+..+++.|+++ |+++....+
T Consensus 306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 46999985 3322 12366888999997 998766543
No 417
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.87 E-value=0.23 Score=39.64 Aligned_cols=94 Identities=22% Similarity=0.379 Sum_probs=53.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHH-cCCCeEEEEcCChh-hH--HHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 198 SVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSK-RF--EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~-~g~~~Vi~~~~~~~-~~--~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
+|+|+|+ |.+|...++.+.. .+.+-+-+++++++ .. +.-.-.|... .... ....+..+.. .+|++||+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~-~~~~-----v~~~l~~~~~-~~DVvIDf 74 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGP-LGVP-----VTDDLEELLE-EADVVIDF 74 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST--SSB-----EBS-HHHHTT-H-SEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCC-cccc-----cchhHHHhcc-cCCEEEEc
Confidence 6899999 9999999999988 56644566666651 11 1111112110 0000 1112223332 38999999
Q ss_pred cCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 273 TGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
+ .++.....++.+... |.-+.+|.+.
T Consensus 75 T-~p~~~~~~~~~~~~~-g~~~ViGTTG 100 (124)
T PF01113_consen 75 T-NPDAVYDNLEYALKH-GVPLVIGTTG 100 (124)
T ss_dssp S--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred C-ChHHhHHHHHHHHhC-CCCEEEECCC
Confidence 9 556766666666666 7878888766
No 418
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.87 E-value=0.14 Score=53.14 Aligned_cols=79 Identities=23% Similarity=0.347 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE--E--EcCCCCCccHHHHHHHHcC-
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD--F--VNTSEHDRPIQEVIAEMTN- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~--v--v~~~~~~~~~~~~i~~~~~- 263 (361)
.+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+... . .|..+. ..+.+.+.+...
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHh
Confidence 4789999988 9999999998888898 89999998877655432 23221 1 222221 123333333322
Q ss_pred -CCccEEEEccCC
Q 018072 264 -GGVDRSVECTGN 275 (361)
Q Consensus 264 -~g~Dvvid~~g~ 275 (361)
+++|++|+++|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 379999999984
No 419
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.86 E-value=0.2 Score=44.64 Aligned_cols=83 Identities=18% Similarity=0.257 Sum_probs=52.8
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE--E--EcCCCCC-ccHHHHHHHH
Q 018072 192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--F--VNTSEHD-RPIQEVIAEM 261 (361)
Q Consensus 192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~--v--v~~~~~~-~~~~~~i~~~ 261 (361)
+..++.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+ ++.+... + .+....+ .++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3557889999988 9999999988888898 899999987665433 3333321 2 2222111 1233333333
Q ss_pred cC--CCccEEEEccCC
Q 018072 262 TN--GGVDRSVECTGN 275 (361)
Q Consensus 262 ~~--~g~Dvvid~~g~ 275 (361)
.+ +.+|.+|.+++.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 268999998864
No 420
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.18 Score=46.99 Aligned_cols=78 Identities=24% Similarity=0.302 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHH----HHHcCCCE-EE--cCCCCCccHHH
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----------KRFEE----AKKFGVTD-FV--NTSEHDRPIQE 256 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~----------~~~~~----~~~~G~~~-vv--~~~~~~~~~~~ 256 (361)
.|.+++|+|+ +++|.+.++.+...|+ +|+.++++. ++++. +++.|... .+ |..+. .++.+
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVP-EQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCH-HHHHH
Confidence 4679999988 8999999998888998 888888763 23322 23344332 22 22222 12333
Q ss_pred HHHHHcC--CCccEEEEcc-C
Q 018072 257 VIAEMTN--GGVDRSVECT-G 274 (361)
Q Consensus 257 ~i~~~~~--~g~Dvvid~~-g 274 (361)
.+..... +.+|++|+++ |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 3333322 3689999998 5
No 421
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.83 E-value=0.25 Score=49.12 Aligned_cols=70 Identities=29% Similarity=0.291 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-----~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv 268 (361)
..+.+|+|+|+|++|+.++.+++..|. .|++++.++. ..+.+++.|.......... ....+|+
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~ 81 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDL 81 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCE
Confidence 356799999999999999999999998 8999986542 2344666787654432111 0125788
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
|+.++|-
T Consensus 82 Vv~s~Gi 88 (480)
T PRK01438 82 VVTSPGW 88 (480)
T ss_pred EEECCCc
Confidence 9888875
No 422
>PRK03612 spermidine synthase; Provisional
Probab=94.82 E-value=0.2 Score=50.37 Aligned_cols=99 Identities=18% Similarity=0.113 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC-CC---------EEEcCCCCCccHHHHHHHHcC
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VT---------DFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G-~~---------~vv~~~~~~~~~~~~i~~~~~ 263 (361)
++.++||++|+|. |..+..+++.....+|+++|.+++-.+.+++.. .. .-++....| ..+.++. .+
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~D--a~~~l~~-~~ 371 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDD--AFNWLRK-LA 371 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEECh--HHHHHHh-CC
Confidence 4568999998863 566666776544369999999999999988721 10 011111112 3333333 23
Q ss_pred CCccEEEEccCCh-----------HHHHHHHHHhcCCCcEEEEEc
Q 018072 264 GGVDRSVECTGNI-----------DNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 264 ~g~Dvvid~~g~~-----------~~~~~~~~~l~~~~G~iv~~g 297 (361)
+.||+|+-....+ +.++.+.+.|+++ |.++.-.
T Consensus 372 ~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 372 EKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 4899998765432 2467888999998 9988754
No 423
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.11 Score=46.71 Aligned_cols=73 Identities=27% Similarity=0.345 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEE--cCCCCCccHHHHHHHHcC--CCccE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFV--NTSEHDRPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv--~~~~~~~~~~~~i~~~~~--~g~Dv 268 (361)
+|.++||+|+ |++|...++.+...|+ +|+++++++++. .+.. ..+ |..+.+ .+.+.+..... +++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAE-GCAAVARAVLERLGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 4789999998 9999999998888898 899998876532 1111 112 222221 13333322222 36899
Q ss_pred EEEccC
Q 018072 269 SVECTG 274 (361)
Q Consensus 269 vid~~g 274 (361)
+|+++|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999987
No 424
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.82 E-value=0.31 Score=43.84 Aligned_cols=101 Identities=18% Similarity=0.173 Sum_probs=68.2
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc---
Q 018072 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--- 262 (361)
Q Consensus 191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~--- 262 (361)
.+.....+||=+|.+ +|+.++.+|+.++. .+|+.++.++++.+.+++ .|...-+.....+ ..+.+..+.
T Consensus 75 ~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~~ 151 (247)
T PLN02589 75 LKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIEDG 151 (247)
T ss_pred HHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhcc
Confidence 444556789999873 47777778877632 389999999998877744 5755444443333 455555543
Q ss_pred --CCCccEEEEccCChH---HHHHHHHHhcCCCcEEEE
Q 018072 263 --NGGVDRSVECTGNID---NMISAFECVHDGWGVAVL 295 (361)
Q Consensus 263 --~~g~Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~ 295 (361)
.+.||.||--..... .++.++++|+++ |.++.
T Consensus 152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred ccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 247999998765433 567888999996 87654
No 425
>PLN00203 glutamyl-tRNA reductase
Probab=94.80 E-value=0.1 Score=52.07 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=61.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
+.+|+|+|+|.+|.+++..+...|..+|+++.++.++.+.+.+ ++...+ .... +.+ +.... ..+|+||.+++
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~----~~d-l~~al-~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKP----LDE-MLACA-AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Eeec----Hhh-HHHHH-hcCCEEEEccC
Confidence 6899999999999999999999998789999999888766654 532111 1111 111 11111 25899999987
Q ss_pred ChHH--HHHHHHHhcC----CCc--EEEEEcCCC
Q 018072 275 NIDN--MISAFECVHD----GWG--VAVLVGVPS 300 (361)
Q Consensus 275 ~~~~--~~~~~~~l~~----~~G--~iv~~g~~~ 300 (361)
.+.. ....++.+.+ .+. .++.++.+.
T Consensus 339 s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 339 SETPLFLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred CCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 6553 2334444321 101 366666654
No 426
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.78 E-value=0.73 Score=40.40 Aligned_cols=119 Identities=16% Similarity=0.110 Sum_probs=73.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
.|.+|||+|+|.+|.-=+.+....|+ +|+++..+. +.+..+.+-+--..+. .. +... .+ .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~---~~--~~~~--~~--~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE---RE--FDAE--DL--DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh---cc--cChh--hh--cCceEEEEeC
Confidence 46789999999999999999999999 777775544 3333333322211111 11 1100 11 1489999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeec
Q 018072 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 324 (361)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~ 324 (361)
++++.-+...+..... +.++.+-..+...++.++...-...+.+-=+..|
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G 130 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG 130 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence 9976666777777776 8888776544334555544333366666545444
No 427
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.75 E-value=0.28 Score=43.45 Aligned_cols=104 Identities=16% Similarity=0.232 Sum_probs=65.3
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~ 262 (361)
.....++++++||=+|+|. |..+..+++..+. .+|+++|.+++..+.+++ .+.+.+. ....+ ..+ + .+.
T Consensus 38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~-~-~~~ 111 (231)
T TIGR02752 38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVE-LVHGN--AME-L-PFD 111 (231)
T ss_pred HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceE-EEEec--hhc-C-CCC
Confidence 3456778999999999865 6677777777642 389999999988777654 2332211 11111 100 0 112
Q ss_pred CCCccEEEEccC------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 263 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 263 ~~g~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
++.+|+|+-... ....+..+.+.|+++ |+++..-.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 347899985321 123567788999997 99987643
No 428
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.74 E-value=0.21 Score=44.94 Aligned_cols=101 Identities=16% Similarity=0.135 Sum_probs=60.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc--CCCEE-EcCCCCCccHHHHHHHHcCCCccEE
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRS 269 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~--G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvv 269 (361)
..+.+|||+|+ |.+|...+..+...|. +|+++.+++++.+..... ++..+ .|..+. . +.+......++|+|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~-~~l~~~~~~~~d~v 89 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---S-DKLVEAIGDDSDAV 89 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC---H-HHHHHHhhcCCCEE
Confidence 34579999998 9999999988888888 898888887765443221 22221 232221 1 12222221268999
Q ss_pred EEccCChH-------------HHHHHHHHhcCC-CcEEEEEcCC
Q 018072 270 VECTGNID-------------NMISAFECVHDG-WGVAVLVGVP 299 (361)
Q Consensus 270 id~~g~~~-------------~~~~~~~~l~~~-~G~iv~~g~~ 299 (361)
|.+.|... .....++.+... .++++.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 99876421 123344444432 1578887754
No 429
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.73 E-value=0.2 Score=45.26 Aligned_cols=80 Identities=21% Similarity=0.302 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
.+.+++|+|+ +++|...+..+...|+ +|+.+++++++++.+. +.|... .+..+-.+ ..+.+.+.+... +.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999988 8999998887878898 7888888887665432 334432 22222222 112333332222 36
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|++.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 430
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.73 E-value=0.22 Score=47.70 Aligned_cols=34 Identities=29% Similarity=0.433 Sum_probs=30.9
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
..+|+|+|+|++|..+++.+.+.|..+++.+|.+
T Consensus 41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4689999999999999999999999899999776
No 431
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.70 E-value=0.24 Score=50.71 Aligned_cols=93 Identities=12% Similarity=0.144 Sum_probs=66.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~ 276 (361)
++|+|.|.|.+|+..++.++..|. .++++|.|+++.+.+++.|...++- +..+ .+.+++..-+.+|.++-+++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQ---LELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCC---HHHHHhcCCccCCEEEEEeCCH
Confidence 689999999999999999999998 8999999999999999988754432 2222 2233333223789999999886
Q ss_pred HHHHHH---HHHhcCCCcEEEE
Q 018072 277 DNMISA---FECVHDGWGVAVL 295 (361)
Q Consensus 277 ~~~~~~---~~~l~~~~G~iv~ 295 (361)
+.-... .+.+.++ -+++.
T Consensus 476 ~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 543333 3444454 45543
No 432
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.69 E-value=0.22 Score=45.71 Aligned_cols=76 Identities=17% Similarity=0.158 Sum_probs=46.1
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CC---CEEEcCCCCCccHHHHHHHHcCC-CccE
Q 018072 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GV---TDFVNTSEHDRPIQEVIAEMTNG-GVDR 268 (361)
Q Consensus 199 VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~---~~vv~~~~~~~~~~~~i~~~~~~-g~Dv 268 (361)
|||+|+ |.+|...+.-+...+.++++.+++++.++..++. + .. ...+...-.|-.-.+.+...... ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 789987 9999988887777787799999999998777653 4 11 11111111221134566666655 8999
Q ss_pred EEEccC
Q 018072 269 SVECTG 274 (361)
Q Consensus 269 vid~~g 274 (361)
||+++.
T Consensus 81 VfHaAA 86 (293)
T PF02719_consen 81 VFHAAA 86 (293)
T ss_dssp EEE---
T ss_pred EEEChh
Confidence 999875
No 433
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.69 E-value=0.055 Score=47.30 Aligned_cols=103 Identities=24% Similarity=0.268 Sum_probs=67.9
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC---
Q 018072 192 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN--- 263 (361)
Q Consensus 192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~--- 263 (361)
+.....+||-+|.+. |+.++.+|+.+.. .+|+.++.++++.+.+++ .|...-+.....+ ..+.+..+..
T Consensus 42 ~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~~ 118 (205)
T PF01596_consen 42 RLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDGE 118 (205)
T ss_dssp HHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTTT
T ss_pred HhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhccC
Confidence 344557899999754 7778888887642 399999999998888754 5664333333333 4445554432
Q ss_pred -CCccEEEEccCChH---HHHHHHHHhcCCCcEEEEEcC
Q 018072 264 -GGVDRSVECTGNID---NMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 264 -~g~Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+.||.||--..... .++.++++|+++ |.++.=..
T Consensus 119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~ 156 (205)
T PF01596_consen 119 EGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNV 156 (205)
T ss_dssp TTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETT
T ss_pred CCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEccc
Confidence 36999987665433 467888999996 87766543
No 434
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.68 E-value=0.25 Score=47.73 Aligned_cols=81 Identities=21% Similarity=0.346 Sum_probs=50.1
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHHc-CCCEE-EcCCCCCccHHHHHHHH
Q 018072 192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAEM 261 (361)
Q Consensus 192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~-------~~~~~-G~~~v-v~~~~~~~~~~~~i~~~ 261 (361)
....+.+|||+|+ |.+|...+..+...|. +|+++.++..+.+ ..... ++..+ .|..+.+ .+.+.++..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-SLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-HHHHHHHHh
Confidence 3456789999998 9999999998888898 8999988765432 11112 23222 2222221 133233221
Q ss_pred cCCCccEEEEccCC
Q 018072 262 TNGGVDRSVECTGN 275 (361)
Q Consensus 262 ~~~g~Dvvid~~g~ 275 (361)
..++|+||+|++.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1169999998864
No 435
>PLN03139 formate dehydrogenase; Provisional
Probab=94.67 E-value=0.16 Score=48.74 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=36.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~ 241 (361)
.|.+|.|+|.|.+|...++.++..|. +|++++++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57899999999999999999999999 89999887544444444443
No 436
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.67 E-value=0.28 Score=45.02 Aligned_cols=97 Identities=15% Similarity=0.110 Sum_probs=65.2
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCEE-E-cCCCC--CccHHHHHHHHcCCCccEEEE
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDF-V-NTSEH--DRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~v-v-~~~~~--~~~~~~~i~~~~~~g~Dvvid 271 (361)
.+|||+|+|. |-.+-.+++....++++.++.+++-.++++++ +.... . |..-. -.+-.+.++.... +||+||-
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999997754 55566777877778999999999999999883 22210 0 11110 0114445554433 7999886
Q ss_pred ccCC----------hHHHHHHHHHhcCCCcEEEEE
Q 018072 272 CTGN----------IDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 272 ~~g~----------~~~~~~~~~~l~~~~G~iv~~ 296 (361)
-+.. .+.++.+-+.|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 4432 35678999999998 998877
No 437
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.67 E-value=0.17 Score=45.10 Aligned_cols=80 Identities=28% Similarity=0.306 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~-~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~ 264 (361)
++.+++|+|+ |++|...+..+...|. +|+. ..++.++.+.+ +..+... .+..+-.+ ..+...+.+... +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999988 9999999998888898 6655 46666554332 3334432 22222222 123333333221 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999999873
No 438
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.66 E-value=0.28 Score=45.53 Aligned_cols=89 Identities=13% Similarity=0.187 Sum_probs=56.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 277 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~ 277 (361)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|.... . + ..+....+ ...|+|+-++...
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~~~---~--s--~~~~~~~~--~~~dvIi~~vp~~- 70 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTTGV---A--N--LRELSQRL--SAPRVVWVMVPHG- 70 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCccc---C--C--HHHHHhhc--CCCCEEEEEcCch-
Confidence 58899999999988887777888 89999999999988887664321 1 1 22222111 1468888887764
Q ss_pred HHHHH----HHHhcCCCcEEEEEcC
Q 018072 278 NMISA----FECVHDGWGVAVLVGV 298 (361)
Q Consensus 278 ~~~~~----~~~l~~~~G~iv~~g~ 298 (361)
..... ...+.++ -.++.++.
T Consensus 71 ~~~~v~~~l~~~l~~g-~ivid~st 94 (298)
T TIGR00872 71 IVDAVLEELAPTLEKG-DIVIDGGN 94 (298)
T ss_pred HHHHHHHHHHhhCCCC-CEEEECCC
Confidence 33333 3334443 44555443
No 439
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=94.65 E-value=0.24 Score=45.38 Aligned_cols=89 Identities=19% Similarity=0.227 Sum_probs=64.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 276 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~ 276 (361)
+|..+|.|.+|.-.++=+...|. .|.+.+++++| .+.+++.|+...-. ..+.+ ...|+||-++.++
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa-----~~aDvVitmv~~~ 68 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAA-----AEADVVITMLPDD 68 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHH-----HhCCEEEEecCCH
Confidence 57889999999999999999998 99999999999 88888888864221 12222 1478888888887
Q ss_pred HHHHHHH-------HHhcCCCcEEEEEcCCC
Q 018072 277 DNMISAF-------ECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 277 ~~~~~~~-------~~l~~~~G~iv~~g~~~ 300 (361)
+.++..+ +.++++ ..++.++..+
T Consensus 69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis 98 (286)
T COG2084 69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTIS 98 (286)
T ss_pred HHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence 7665554 234455 6677776544
No 440
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.63 E-value=0.38 Score=45.21 Aligned_cols=93 Identities=18% Similarity=0.045 Sum_probs=62.5
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE--c------CCCCCccHHHHHHHHcCCCccE
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--N------TSEHDRPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv--~------~~~~~~~~~~~i~~~~~~g~Dv 268 (361)
-+|.|+|+|.+|.+.+..+...|. .|.++++++++.+.+.+.+..... . ....+ +..+.+ +..|+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~-~~~e~~-----~~aD~ 77 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTA-DPEEAL-----AGADF 77 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeC-CHHHHH-----cCCCE
Confidence 479999999999999988888888 899999998887777654211000 0 00000 122211 25899
Q ss_pred EEEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 269 SVECTGNIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
||-++... .++..++.+++. -.++.+..
T Consensus 78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 99999884 567777888875 56665543
No 441
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.62 E-value=0.21 Score=45.54 Aligned_cols=79 Identities=23% Similarity=0.354 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-------HH----HHHHcCCCE-E--EcCCCCCccHHHHHH
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FE----EAKKFGVTD-F--VNTSEHDRPIQEVIA 259 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-------~~----~~~~~G~~~-v--v~~~~~~~~~~~~i~ 259 (361)
.+.+++|+|+ |++|...++.+...|+ +|++++++.++ ++ .++..+... . .|..+.+ .+.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDED-QVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHH
Confidence 4578999998 9999999998888898 88888876542 11 122344432 2 2332221 2333333
Q ss_pred HHcC--CCccEEEEccCC
Q 018072 260 EMTN--GGVDRSVECTGN 275 (361)
Q Consensus 260 ~~~~--~g~Dvvid~~g~ 275 (361)
.... +.+|++|+++|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 2211 368999999874
No 442
>PLN02256 arogenate dehydrogenase
Probab=94.61 E-value=0.31 Score=45.36 Aligned_cols=90 Identities=18% Similarity=0.224 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
..+.+|.|+|.|.+|...+..++..|. .|+++++++. .+.+.++|+.. ..+ ..+.+ ....|+||-++
T Consensus 34 ~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVilav 100 (304)
T PLN02256 34 SRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVLLCT 100 (304)
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEEEec
Confidence 455789999999999998888888887 8999988864 45666677632 111 22221 12478888888
Q ss_pred CChHHHHHHHHH-----hcCCCcEEEEEcC
Q 018072 274 GNIDNMISAFEC-----VHDGWGVAVLVGV 298 (361)
Q Consensus 274 g~~~~~~~~~~~-----l~~~~G~iv~~g~ 298 (361)
... .+...++. ++++ ..++.++.
T Consensus 101 p~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 101 SIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 763 33433333 3454 55666655
No 443
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.56 E-value=0.2 Score=44.42 Aligned_cols=79 Identities=23% Similarity=0.320 Sum_probs=48.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
+.++||+|+ |++|...+..+...|+ +|+.+ ++++++.+.+.. .+... ++..+-.+ ..+.+.+..... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999988 9999998888777898 78777 888776544322 23222 22222122 123333333222 26
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 444
>PRK07411 hypothetical protein; Validated
Probab=94.55 E-value=0.37 Score=46.55 Aligned_cols=34 Identities=32% Similarity=0.275 Sum_probs=30.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
..+|+|+|+|++|..+++.+.+.|..+++.+|.+
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3689999999999999999999999899888765
No 445
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.55 E-value=0.61 Score=36.46 Aligned_cols=89 Identities=21% Similarity=0.314 Sum_probs=62.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 198 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
+|.|+|+|..|......+... +.+-+-++++++++.+.+ +++|.. .+ .+ +.+.+.. ..+|+|+.++.
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~----~~~ll~~---~~~D~V~I~tp 71 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TD----LEELLAD---EDVDAVIIATP 71 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SS----HHHHHHH---TTESEEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hH----HHHHHHh---hcCCEEEEecC
Confidence 688999999999888766666 342334567888777764 567876 32 22 4333332 26999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 275 NIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
.....+.+..++.. |.-+++-.
T Consensus 72 ~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 72 PSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp GGGHHHHHHHHHHT--TSEEEEES
T ss_pred CcchHHHHHHHHHc--CCEEEEEc
Confidence 97788888888886 56666643
No 446
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.54 E-value=0.26 Score=45.25 Aligned_cols=68 Identities=22% Similarity=0.299 Sum_probs=49.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 277 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~ 277 (361)
+|.|+|.|.+|...+..++..|. .|+++++++++.+.+.+.|.... ...+ . +. . ...|+||.|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~~~--~-~~---~--~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---ASTD--L-SL---L--KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---ccCC--H-hH---h--cCCCEEEEcCCHHH
Confidence 58899999999988888887887 89999999999988888775211 1111 1 11 1 25789999987633
No 447
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.53 E-value=1.3 Score=33.16 Aligned_cols=76 Identities=20% Similarity=0.329 Sum_probs=50.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072 198 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 272 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g---~~~Vi-~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~ 272 (361)
+|.|+|+|.+|.+.+.-+...| . +|+ ++++++++.+.+. +++...... +..+.+. ..|+||-+
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccC------ChHHhhc-----cCCEEEEE
Confidence 5778899999999999888888 5 777 5499999887774 566432210 1333332 37999999
Q ss_pred cCChHHHHHHHHHh
Q 018072 273 TGNIDNMISAFECV 286 (361)
Q Consensus 273 ~g~~~~~~~~~~~l 286 (361)
+.. ..+...++.+
T Consensus 69 v~p-~~~~~v~~~i 81 (96)
T PF03807_consen 69 VKP-QQLPEVLSEI 81 (96)
T ss_dssp S-G-GGHHHHHHHH
T ss_pred ECH-HHHHHHHHHH
Confidence 977 4445444444
No 448
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=94.53 E-value=0.44 Score=44.81 Aligned_cols=134 Identities=18% Similarity=0.266 Sum_probs=82.8
Q ss_pred EEEEEcCCHHH-HHHHHHHHHcC--CCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 198 SVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 198 ~VlI~G~g~vG-~~a~~~a~~~g--~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
+|.|+|+|.++ ...+..++..+ ...+-++++++++.+. ++++|.... +.+ +.+.+ ....+|+|+.++
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~----~~~ll---~~~~iD~V~Iat 75 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTD----LEELL---ADPDIDAVYIAT 75 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCC----HHHHh---cCCCCCEEEEcC
Confidence 68899997554 55666666655 3456666888888554 566887622 221 33332 223699999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344 (361)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l 344 (361)
.+..-.+.+.+.|.. |+=|++-.+-....-.... ...- +++.+.-.+..++ ...+.++-+++.+|+|
T Consensus 76 p~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf--~p~~~~~k~li~~g~l 145 (342)
T COG0673 76 PNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGFNRRF--DPAVQALKELIDSGAL 145 (342)
T ss_pred CChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeehhhhc--CHHHHHHHHHHhcCCc
Confidence 998888999999986 6778885443222111111 1111 3444443333333 3678899999999866
No 449
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.52 E-value=0.88 Score=41.98 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=34.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~ 236 (361)
.+|.|+|+|.+|...++.+...|. +|+.+++++++++.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence 479999999999999888888898 899999999887654
No 450
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.51 E-value=0.4 Score=41.66 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
..+|+|+|+|++|...+.-+...|..+++.+|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3689999999999999999999999889888755
No 451
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=94.51 E-value=0.35 Score=47.55 Aligned_cols=103 Identities=17% Similarity=0.299 Sum_probs=63.7
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~ 263 (361)
...++++|++||=+|+|+ |..++.+++.. +..+|+++|.++++++.+++ +|.+. +.....+ ..+....+ .
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~-v~~~~~D--~~~~~~~~-~ 318 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTN-IETKALD--ARKVHEKF-A 318 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEeCC--cccccchh-c
Confidence 345678899988888755 45555666655 23489999999998877644 56654 2222222 11111111 1
Q ss_pred CCccEEEEc---cCC-------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072 264 GGVDRSVEC---TGN-------------------------IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 264 ~g~Dvvid~---~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g 297 (361)
+.||+|+-. +|. ...+..+.+.|+++ |+++...
T Consensus 319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvyst 379 (444)
T PRK14902 319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYST 379 (444)
T ss_pred ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEc
Confidence 468998752 221 13577888999997 9988654
No 452
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.51 E-value=0.18 Score=44.65 Aligned_cols=105 Identities=15% Similarity=0.183 Sum_probs=67.0
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHcCCC----EEEcCCCCCccHHHHHHHHcC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTN 263 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~G~~----~vv~~~~~~~~~~~~i~~~~~ 263 (361)
.....+++.+||-+|+|. |..+..+++..+ ..+++++|.+++..+.+++.-.. ..+.....+ +.+. ....
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~ 119 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD 119 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence 344566788999999987 788888888775 23999999999888887663211 111111111 1100 0122
Q ss_pred CCccEEEEcc------CChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072 264 GGVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVP 299 (361)
Q Consensus 264 ~g~Dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~ 299 (361)
+.+|+|+... .....+..+.+.|+++ |+++++...
T Consensus 120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~ 160 (239)
T PRK00216 120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS 160 (239)
T ss_pred CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence 3689987532 1234677888999998 999887543
No 453
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.50 E-value=0.11 Score=47.07 Aligned_cols=76 Identities=21% Similarity=0.275 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV 270 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~Dvvi 270 (361)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+. ..... ..|..+. ..+.+.+..... +.+|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSA-EEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence 3678999987 9999999999888998 88888887765431 11111 1232222 123333333322 3689999
Q ss_pred EccCC
Q 018072 271 ECTGN 275 (361)
Q Consensus 271 d~~g~ 275 (361)
+++|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 99873
No 454
>PRK09135 pteridine reductase; Provisional
Probab=94.50 E-value=0.24 Score=44.03 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHH----HcCC-C-EEEcCCCCC-ccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAK----KFGV-T-DFVNTSEHD-RPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~----~~G~-~-~vv~~~~~~-~~~~~~i~~~~~-- 263 (361)
.+.++||+|+ |.+|...++.+...|. +|++++++. ++.+.+. +.+. . ..+..+-.+ ..+.+.+.....
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578999998 9999999988888898 888887753 3333322 2211 1 122222222 123333333211
Q ss_pred CCccEEEEccC
Q 018072 264 GGVDRSVECTG 274 (361)
Q Consensus 264 ~g~Dvvid~~g 274 (361)
+++|+||+++|
T Consensus 84 ~~~d~vi~~ag 94 (249)
T PRK09135 84 GRLDALVNNAS 94 (249)
T ss_pred CCCCEEEECCC
Confidence 36899999987
No 455
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.2 Score=45.40 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=48.7
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR 268 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv 268 (361)
+++|+|+ |++|...+..+...|. +|+.++++.++.+.+ +..+.+. .+..+-.+ .++.+.+..... +++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899988 9999999988888898 899998888765543 2233332 22122122 123333332221 37899
Q ss_pred EEEccCC
Q 018072 269 SVECTGN 275 (361)
Q Consensus 269 vid~~g~ 275 (361)
+|+++|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999874
No 456
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.48 E-value=0.23 Score=46.89 Aligned_cols=97 Identities=22% Similarity=0.279 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHH--cCCCccEEEE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM--TNGGVDRSVE 271 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~--~~~g~Dvvid 271 (361)
.++.+||=+|+|. |..+..+++..+..+|+++|.+++-++.+++.....-+.....+ +..+ .++.||+|+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD------~e~lp~~~~sFDvVIs 184 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGD------AEDLPFPTDYADRYVS 184 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEecc------HHhCCCCCCceeEEEE
Confidence 5678999999876 77777778776545899999999888887763211101111111 1111 2236999887
Q ss_pred cc------CChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 272 CT------GNIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 272 ~~------g~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+- .....+..+.+.|+++ |++++.+.
T Consensus 185 ~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 185 AGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred cChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 43 1234678899999998 99988753
No 457
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.46 E-value=0.5 Score=42.91 Aligned_cols=103 Identities=16% Similarity=0.235 Sum_probs=66.9
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc-C------CCE--EEcCCCCCccHHHHH
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF-G------VTD--FVNTSEHDRPIQEVI 258 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~-G------~~~--vv~~~~~~~~~~~~i 258 (361)
+..+++++++||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++. . .+. ++.-+..+ +
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~--l---- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD--L---- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc--C----
Confidence 345678899999999865 5567777777653 3899999999988887642 1 111 11111111 0
Q ss_pred HHHcCCCccEEEEccC------ChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 259 AEMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 259 ~~~~~~g~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
.+.++.||+|+-..+ ....+..+.+.|+++ |+++++-...
T Consensus 140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~ 185 (261)
T PLN02233 140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK 185 (261)
T ss_pred -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence 112236899976432 234678899999998 9998876544
No 458
>PRK11579 putative oxidoreductase; Provisional
Probab=94.43 E-value=0.93 Score=42.94 Aligned_cols=132 Identities=16% Similarity=0.146 Sum_probs=76.4
Q ss_pred CEEEEEcCCHHHH-HHHHHHHH-cCCCeEE-EEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 197 SSVAVFGLGAVGL-AAAEGARI-AGASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 197 ~~VlI~G~g~vG~-~a~~~a~~-~g~~~Vi-~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
-+|.|+|.|.+|. ..+...+. -+. +++ +.++++++.+ .+++...++ . + +.+.+ .+..+|+|+.++
T Consensus 5 irvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~--~--~--~~ell---~~~~vD~V~I~t 72 (346)
T PRK11579 5 IRVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKVK--ADWPTVTVV--S--E--PQHLF---NDPNIDLIVIPT 72 (346)
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHHH--hhCCCCcee--C--C--HHHHh---cCCCCCEEEEcC
Confidence 4799999999986 44554443 366 555 4566655543 334322221 1 1 33333 223799999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhh-c-cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072 274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INV-L-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344 (361)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l 344 (361)
....-.+.+..+|.. |+=|++-.+-....-.... ... . +++.+.-.+..++ ...+..+-+++++|.|
T Consensus 73 p~~~H~~~~~~al~a--GkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~--~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 73 PNDTHFPLAKAALEA--GKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRW--DSDFLTLKALLAEGVL 142 (346)
T ss_pred CcHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccC--CHHHHHHHHHHhcCCC
Confidence 998888899988876 6777775433111111111 111 1 4555543333333 3578888888988876
No 459
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.43 E-value=0.26 Score=47.72 Aligned_cols=76 Identities=21% Similarity=0.271 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCC-EEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVE 271 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvid 271 (361)
.+.+++|+|+ |++|.+.+..+...|. +|+++++++++++... +.+.. ..+..+-.+ . +.+.+.. +++|++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~-~~v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E-AALAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H-HHHHHHh-CCCCEEEE
Confidence 4679999998 9999999998888898 8998988877654322 11111 122222222 1 2233322 36999999
Q ss_pred ccCC
Q 018072 272 CTGN 275 (361)
Q Consensus 272 ~~g~ 275 (361)
+.|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 8874
No 460
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.42 E-value=0.26 Score=45.82 Aligned_cols=44 Identities=27% Similarity=0.447 Sum_probs=37.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~ 242 (361)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~ 45 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT 45 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence 58899999999988887777888 899999999998888777653
No 461
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.42 E-value=0.43 Score=38.30 Aligned_cols=94 Identities=18% Similarity=0.311 Sum_probs=57.2
Q ss_pred EEEEcC-CHHHHHHHHHHHHcC--CCeEEEEcCChh--h-HHHHHHcCCCEEEcCCCCC-ccHH----------------
Q 018072 199 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSK--R-FEEAKKFGVTDFVNTSEHD-RPIQ---------------- 255 (361)
Q Consensus 199 VlI~G~-g~vG~~a~~~a~~~g--~~~Vi~~~~~~~--~-~~~~~~~G~~~vv~~~~~~-~~~~---------------- 255 (361)
|.|+|+ |.+|..++++.+... + +|++...+.. + .++++++.+..+...+... ..+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999999987 5 6776655443 2 3445678888776654422 0111
Q ss_pred HHHHHHcC-CCccEEEEccCChHHHHHHHHHhcCCCcEEE
Q 018072 256 EVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAV 294 (361)
Q Consensus 256 ~~i~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv 294 (361)
+.+.++.. ..+|+|+.+.-+-..+.-.+..++.+ -++.
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~ia 118 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIA 118 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEE
Confidence 11223333 26788888766667777777777764 4443
No 462
>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional
Probab=94.39 E-value=0.21 Score=51.63 Aligned_cols=77 Identities=23% Similarity=0.262 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-C
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D 251 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~-~ 251 (361)
+.+++|+|+|+|+.|+.++..+...|. +|++++.++. ..+.++++|++...+.... +
T Consensus 191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d 269 (652)
T PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD 269 (652)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence 467899999999999999999999998 7888877643 1455677888765554311 1
Q ss_pred ccHHHHHHHHcCCCccEEEEccCCh
Q 018072 252 RPIQEVIAEMTNGGVDRSVECTGNI 276 (361)
Q Consensus 252 ~~~~~~i~~~~~~g~Dvvid~~g~~ 276 (361)
... +.+. ..+|.||-++|..
T Consensus 270 v~~-~~~~----~~~DaVilAtGa~ 289 (652)
T PRK12814 270 ITL-EELQ----KEFDAVLLAVGAQ 289 (652)
T ss_pred cCH-HHHH----hhcCEEEEEcCCC
Confidence 111 1111 1489999998864
No 463
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=94.39 E-value=0.63 Score=45.36 Aligned_cols=73 Identities=23% Similarity=0.367 Sum_probs=51.1
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHH---------cC-CCc
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---------TN-GGV 266 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~---------~~-~g~ 266 (361)
.+|.|+|.|-+|...+..+...|. +|+++++++++.+.++. |...+ .... ..+.+++. +. ...
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e~~--l~~~l~~~~~~g~l~~~~~~~~a 76 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VEPD--LDMVVKTAVEGGYLRATTTPEPA 76 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CCCC--HHHHHHHHhhcCceeeecccccC
Confidence 479999999999998888888898 99999999999987653 33221 1211 33333221 11 157
Q ss_pred cEEEEccCCh
Q 018072 267 DRSVECTGNI 276 (361)
Q Consensus 267 Dvvid~~g~~ 276 (361)
|+||-|++.+
T Consensus 77 Dvvii~vptp 86 (415)
T PRK11064 77 DAFLIAVPTP 86 (415)
T ss_pred CEEEEEcCCC
Confidence 9999999985
No 464
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.8 Score=40.88 Aligned_cols=104 Identities=16% Similarity=0.137 Sum_probs=60.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH----HHcCCCE-E--EcCCCCC--ccHHHHHHHH--
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEM-- 261 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~~----~~~G~~~-v--v~~~~~~--~~~~~~i~~~-- 261 (361)
.+.+++|+|+ +++|...++.+...|+ +|+.+. +++++.+.+ ++.+... . .|..+.+ ..+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4678999987 8999999998888998 777653 444443322 2223321 1 1222211 1122222221
Q ss_pred --cC-CCccEEEEccCChH----------HH---------------HHHHHHhcCCCcEEEEEcCCC
Q 018072 262 --TN-GGVDRSVECTGNID----------NM---------------ISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 262 --~~-~g~Dvvid~~g~~~----------~~---------------~~~~~~l~~~~G~iv~~g~~~ 300 (361)
.. +++|++++++|... .+ ..+++.+... |+++.++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 11 26899999987310 11 2355566776 9999987654
No 465
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.36 E-value=0.19 Score=46.45 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=50.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 277 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~ 277 (361)
+|.|+|.|.+|...+..+...|. +|+++++++++.+.+.+.|.... .+ +.+.+ ...|+||.++..+.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-----~~--~~e~~-----~~~d~vi~~vp~~~ 70 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA-----ST--AKAVA-----EQCDVIITMLPNSP 70 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-----CC--HHHHH-----hcCCEEEEeCCCHH
Confidence 68899999999987777777887 89999999998888877765311 11 22222 14688888887644
Q ss_pred HHHH
Q 018072 278 NMIS 281 (361)
Q Consensus 278 ~~~~ 281 (361)
....
T Consensus 71 ~~~~ 74 (296)
T PRK11559 71 HVKE 74 (296)
T ss_pred HHHH
Confidence 4443
No 466
>PRK08223 hypothetical protein; Validated
Probab=94.36 E-value=0.24 Score=45.41 Aligned_cols=34 Identities=29% Similarity=0.267 Sum_probs=30.4
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
..+|+|+|+|++|..+++.+.++|..++..+|.+
T Consensus 27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4689999999999999999999999899888665
No 467
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.35 E-value=0.39 Score=44.31 Aligned_cols=70 Identities=16% Similarity=0.142 Sum_probs=50.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 277 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~ 277 (361)
+|.|+|.|.+|...+..+...|. +|+++++++++.+.+.+.|.... .+ ..+.+ ...|+||.++....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--~~~~~-----~~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-----ET--ARQVT-----EQADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-----CC--HHHHH-----hcCCEEEEecCCHH
Confidence 37789999999988887778888 89999999999988887775321 11 22222 14688888887644
Q ss_pred HHH
Q 018072 278 NMI 280 (361)
Q Consensus 278 ~~~ 280 (361)
...
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 433
No 468
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.35 E-value=0.36 Score=42.58 Aligned_cols=47 Identities=30% Similarity=0.345 Sum_probs=39.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHHcC
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS----------KRFEEAKKFG 240 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~----------~~~~~~~~~G 240 (361)
-.|.+|+|.|.|.+|..+++++...|.+.|.++|++. +.++..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 3578999999999999999999999986777788887 7777766654
No 469
>PRK14968 putative methyltransferase; Provisional
Probab=94.33 E-value=0.28 Score=41.73 Aligned_cols=43 Identities=33% Similarity=0.505 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~ 238 (361)
..+++++|.+|+|. |..+..+++. +. +|++++.+++..+.+++
T Consensus 21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~ 63 (188)
T PRK14968 21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAKC 63 (188)
T ss_pred ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHHH
Confidence 37888999998754 5566666666 65 99999999988777643
No 470
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.31 E-value=0.23 Score=46.08 Aligned_cols=91 Identities=21% Similarity=0.307 Sum_probs=57.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 277 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~ 277 (361)
+|.++|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+... . + ..+.+... ...|+||-++..++
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~~~----~-s--~~~~~~~~--~~advVi~~vp~~~ 71 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGITAR----H-S--LEELVSKL--EAPRTIWVMVPAGE 71 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec----C-C--HHHHHHhC--CCCCEEEEEecCch
Confidence 57889999999988887777888 89999999999888877775321 1 1 22222111 12577887777653
Q ss_pred HHHHHHH----HhcCCCcEEEEEcCC
Q 018072 278 NMISAFE----CVHDGWGVAVLVGVP 299 (361)
Q Consensus 278 ~~~~~~~----~l~~~~G~iv~~g~~ 299 (361)
.++..+. .++++ ..++.++..
T Consensus 72 ~~~~v~~~i~~~l~~g-~ivid~st~ 96 (299)
T PRK12490 72 VTESVIKDLYPLLSPG-DIVVDGGNS 96 (299)
T ss_pred HHHHHHHHHhccCCCC-CEEEECCCC
Confidence 4443332 23443 455555443
No 471
>PRK05855 short chain dehydrogenase; Validated
Probab=94.31 E-value=0.2 Score=50.70 Aligned_cols=79 Identities=22% Similarity=0.248 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-E--EcCCCCCccHHHHHHHHcC--C
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-v--v~~~~~~~~~~~~i~~~~~--~ 264 (361)
.+.++||+|+ |++|...++.+...|. +|+.+++++++++.+. +.|... . .|..+. ..+.+.+..... +
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDA-DAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHhcC
Confidence 4578999988 9999999988888899 7999999987766543 234322 2 222222 123333333322 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
.+|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 68999999875
No 472
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=94.30 E-value=0.52 Score=46.10 Aligned_cols=103 Identities=16% Similarity=0.258 Sum_probs=63.4
Q ss_pred hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 264 (361)
Q Consensus 189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~ 264 (361)
...++++|++||=+|+|+ |..+..++...+..+|+++|.++++++.+++ +|....+...+.. ... .....+
T Consensus 238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~-~~~---~~~~~~ 312 (427)
T PRK10901 238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDAR-DPA---QWWDGQ 312 (427)
T ss_pred HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcc-cch---hhcccC
Confidence 345678999999888765 4455566665542489999999998877744 5554221111111 011 011123
Q ss_pred CccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072 265 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 265 g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g 297 (361)
.||.|+- |.+. ...+..+.+.|+++ |+++..-
T Consensus 313 ~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvyst 372 (427)
T PRK10901 313 PFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYAT 372 (427)
T ss_pred CCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 6999884 2221 13577888899997 9988654
No 473
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.27 E-value=0.22 Score=44.31 Aligned_cols=78 Identities=21% Similarity=0.323 Sum_probs=46.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhh-H---HHHHHcCCCEEE---cCCCCCccHHHHHHHHcC--C
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKR-F---EEAKKFGVTDFV---NTSEHDRPIQEVIAEMTN--G 264 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~-~---~~~~~~G~~~vv---~~~~~~~~~~~~i~~~~~--~ 264 (361)
+.+++|+|+ |++|...++.+...|+ +|+.. ++++.+ . +.+++.+..... |..+.+ .+.+.+.+... +
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEVG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence 578899987 9999999999988998 66664 333332 2 222334554332 222211 23333333221 3
Q ss_pred CccEEEEccCC
Q 018072 265 GVDRSVECTGN 275 (361)
Q Consensus 265 g~Dvvid~~g~ 275 (361)
++|++++++|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 78999999985
No 474
>PRK12743 oxidoreductase; Provisional
Probab=94.27 E-value=0.26 Score=44.32 Aligned_cols=79 Identities=18% Similarity=0.138 Sum_probs=47.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHH----HHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072 196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE----AKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 265 (361)
Q Consensus 196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~----~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g 265 (361)
+.++||+|+ +++|...++.+...|+ +|+.+. ++.++.+. ++..|... .+..+-.+ ..+...+.+... +.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999988 8999999999989999 776664 45444333 23345432 22222222 112233333222 26
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 475
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=94.27 E-value=0.16 Score=54.65 Aligned_cols=78 Identities=19% Similarity=0.175 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHHcCCCEEEcCCCCCc
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~~~~~~~G~~~vv~~~~~~~ 252 (361)
..|.+|+|+|+|+.|+.++..+...|. .|+++++.+ ...+.++++|.+...+..-..+
T Consensus 304 ~~gkkVaVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~d 382 (944)
T PRK12779 304 AVKPPIAVVGSGPSGLINAYLLAVEGF-PVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKT 382 (944)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEeccE
Confidence 458999999999999999999999998 888887653 2345667788876554332211
Q ss_pred cHHHHHHHHcCCCccEEEEccCC
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGN 275 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~ 275 (361)
+ .+.++...+||.||-++|.
T Consensus 383 -i--t~~~l~~~~yDAV~LAtGA 402 (944)
T PRK12779 383 -A--TLEDLKAAGFWKIFVGTGA 402 (944)
T ss_pred -E--eHHHhccccCCEEEEeCCC
Confidence 1 1222322379999999986
No 476
>PRK13984 putative oxidoreductase; Provisional
Probab=94.27 E-value=0.22 Score=50.98 Aligned_cols=77 Identities=26% Similarity=0.286 Sum_probs=54.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH- 250 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~- 250 (361)
.+.+++|+|+|+|+.|+.++..++..|. +|+++++.+. ..+.++++|++..++..-.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4678999999999999999999999998 7888866531 2456677888765553321
Q ss_pred CccHHHHHHHHcCCCccEEEEccCC
Q 018072 251 DRPIQEVIAEMTNGGVDRSVECTGN 275 (361)
Q Consensus 251 ~~~~~~~i~~~~~~g~Dvvid~~g~ 275 (361)
+.... .++ ..+|.+|.++|.
T Consensus 359 ~~~~~-~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPLE-ELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCHH-HHH----hcCCEEEEEcCc
Confidence 11121 221 269999999995
No 477
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.27 Score=45.30 Aligned_cols=81 Identities=21% Similarity=0.179 Sum_probs=48.6
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--
Q 018072 194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FE----EAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN-- 263 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~----~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~-- 263 (361)
-.+.++||+|+ |++|...+..+...|+ +|+.+++++++ .+ .++..+... .+..+-.+ ..+.+.+.+...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34678999998 9999999988888898 88888776432 22 222334332 22222222 123333333222
Q ss_pred CCccEEEEccCC
Q 018072 264 GGVDRSVECTGN 275 (361)
Q Consensus 264 ~g~Dvvid~~g~ 275 (361)
+++|++|.++|.
T Consensus 123 ~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 GRLDILVNNAAF 134 (290)
T ss_pred CCCCEEEECCcc
Confidence 368999998874
No 478
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.25 E-value=0.3 Score=44.14 Aligned_cols=79 Identities=20% Similarity=0.349 Sum_probs=48.7
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHH-HHcCCCEE--EcCCCCCccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~---~~~~~~~-~~~G~~~v--v~~~~~~~~~~~~i~~~~~-- 263 (361)
.+.++||+|+ +++|.+.++.+...|+ +|+.+++. +++++.+ ++++.... .|..+.+ ++.+.+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE-QIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH-HHHHHHHHHHHHh
Confidence 4688999984 5899999888888898 78776433 3444433 33453322 2332222 24444444332
Q ss_pred CCccEEEEccCC
Q 018072 264 GGVDRSVECTGN 275 (361)
Q Consensus 264 ~g~Dvvid~~g~ 275 (361)
+.+|++++++|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 379999998864
No 479
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=94.24 E-value=0.49 Score=45.73 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=30.2
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
..+|+|+|+|++|..++..+.+.|..+++.+|.+
T Consensus 42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4589999999999999999999999899888755
No 480
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.24 E-value=0.83 Score=42.72 Aligned_cols=104 Identities=14% Similarity=0.111 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHH-c---CCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072 194 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKK-F---GVTDFVNTSEHDRPIQEVIAEMTNGGVDR 268 (361)
Q Consensus 194 ~~g~~VlI~G~g~vG~~a~~~a~-~~g~~~Vi~~~~~~~~~~~~~~-~---G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv 268 (361)
+...+|+|+|+|..|...+..+. ..+..+|.++++++++.+.+.+ + |.. +....+ ..+.+ .+.|+
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~~~----~~~av-----~~aDI 192 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVVTD----LEAAV-----RQADI 192 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEeCC----HHHHH-----hcCCE
Confidence 55688999999999999886444 4676799999999888665543 3 322 111111 22222 25899
Q ss_pred EEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh
Q 018072 269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 310 (361)
Q Consensus 269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~ 310 (361)
|+.+++++..+- -.+.++++ -.+..+|... ...-.+...
T Consensus 193 Vi~aT~s~~pvl-~~~~l~~g-~~i~~ig~~~-~~~~El~~~ 231 (314)
T PRK06141 193 ISCATLSTEPLV-RGEWLKPG-THLDLVGNFT-PDMRECDDE 231 (314)
T ss_pred EEEeeCCCCCEe-cHHHcCCC-CEEEeeCCCC-cccccCCHH
Confidence 999888753311 12567775 5555566433 333444443
No 481
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.22 E-value=0.3 Score=44.92 Aligned_cols=89 Identities=19% Similarity=0.198 Sum_probs=57.1
Q ss_pred EEEEEcCCHHHHHH-HHHHHHcCCCeEEEEcCChhh--HHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072 198 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 198 ~VlI~G~g~vG~~a-~~~a~~~g~~~Vi~~~~~~~~--~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g 274 (361)
+|.|+|+|.+|... ..+.+..+.+-+-+++.++++ ++.++++|....... +...+. +..+|+|+++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll~---~~dIDaV~iaTp 73 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEG------VDGLLA---NPDIDIVFDATS 73 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHhc---CCCCCEEEECCC
Confidence 68899999999865 455554466334445666654 566778887543311 222221 237999999999
Q ss_pred ChHHHHHHHHHhcCCCcEEEEEc
Q 018072 275 NIDNMISAFECVHDGWGVAVLVG 297 (361)
Q Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~g 297 (361)
.....+.+...+.. |+.++.-
T Consensus 74 ~~~H~e~a~~al~a--Gk~VIde 94 (285)
T TIGR03215 74 AKAHARHARLLAEL--GKIVIDL 94 (285)
T ss_pred cHHHHHHHHHHHHc--CCEEEEC
Confidence 97777777766665 6666543
No 482
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.22 E-value=0.36 Score=43.95 Aligned_cols=80 Identities=20% Similarity=0.200 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g 265 (361)
+..+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+. ..+... .+..+-.+ ..+.+.+.... -++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3458999998 9999999998888898 8888888776554332 234332 22222222 12333333221 136
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|.++|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 483
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.21 E-value=0.7 Score=40.48 Aligned_cols=97 Identities=20% Similarity=0.227 Sum_probs=58.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHH-HcCCCccEEE
Q 018072 193 PERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRSV 270 (361)
Q Consensus 193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~-~~~~g~Dvvi 270 (361)
+++|++||=+|+|+ |..+..+++..+. ..|+++|.++.. ...++ .++.-+-.+.+..+.+.. +..+.+|+|+
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~~~~~~D~V~ 122 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERVGDSKVQVVM 122 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence 58899888889866 5556566666543 489999998721 11122 233222222222333333 3344899999
Q ss_pred Ecc-----CC------------hHHHHHHHHHhcCCCcEEEEE
Q 018072 271 ECT-----GN------------IDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 271 d~~-----g~------------~~~~~~~~~~l~~~~G~iv~~ 296 (361)
... |. ...+..+.+.|+++ |+++..
T Consensus 123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~ 164 (209)
T PRK11188 123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK 164 (209)
T ss_pred cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 744 22 13567888899997 998874
No 484
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.21 E-value=0.26 Score=44.06 Aligned_cols=76 Identities=21% Similarity=0.245 Sum_probs=48.6
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EE--cCCCCCccHHHHHHHHcC--CCcc
Q 018072 198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GGVD 267 (361)
Q Consensus 198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~g~D 267 (361)
+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+... .+ |..+. ..+.+.+..... +.+|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK-DQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCCCC
Confidence 6899987 9999999998888998 899888887655433 2334322 22 22222 123333333322 2689
Q ss_pred EEEEccCC
Q 018072 268 RSVECTGN 275 (361)
Q Consensus 268 vvid~~g~ 275 (361)
++|++.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99999874
No 485
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.20 E-value=0.34 Score=45.26 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK 231 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~ 231 (361)
.|.+|.|+|.|.+|...++.++..|. +|+++++..+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 8999987654
No 486
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.20 E-value=0.22 Score=46.32 Aligned_cols=96 Identities=17% Similarity=0.167 Sum_probs=54.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCEEEcCCCCCccHHH-HHHHHcCCCccEEEEccC
Q 018072 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQE-VIAEMTNGGVDRSVECTG 274 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~vv~~~~~~~~~~~-~i~~~~~~g~Dvvid~~g 274 (361)
.+|+|+|+|++|.+..-.+...|. .|+.+++.+++++.+++- |.. +..... ...+.. .......+.+|+||-|+=
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECC
Confidence 369999999999877766667787 788888887777777653 432 211111 000000 000001126899999885
Q ss_pred ChHH---HHHHHHHhcCCCcEEEEE
Q 018072 275 NIDN---MISAFECVHDGWGVAVLV 296 (361)
Q Consensus 275 ~~~~---~~~~~~~l~~~~G~iv~~ 296 (361)
..++ ++.....+.++ ..++.+
T Consensus 80 ~~~~~~al~~l~~~l~~~-t~vv~l 103 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPG-AELLLL 103 (305)
T ss_pred HHhHHHHHHHHHhhCCCC-CEEEEE
Confidence 4332 23333344555 655544
No 487
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.19 E-value=0.66 Score=44.43 Aligned_cols=81 Identities=28% Similarity=0.234 Sum_probs=47.7
Q ss_pred CCCCEEEEEcC-CHHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHHHHcCCCE-EEcCCCCC-c
Q 018072 194 ERGSSVAVFGL-GAVGLA--AAEGARIAGASRIIGVDRSSK--R--------------FEEAKKFGVTD-FVNTSEHD-R 252 (361)
Q Consensus 194 ~~g~~VlI~G~-g~vG~~--a~~~a~~~g~~~Vi~~~~~~~--~--------------~~~~~~~G~~~-vv~~~~~~-~ 252 (361)
..|.++||+|+ +++|++ .++.+ ..|+ ++++++...+ + .+.+++.|... .+.-+-.+ .
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 44678999987 899999 45555 7898 7777763221 1 23445567542 23322222 1
Q ss_pred cHHHHHHHHcC--CCccEEEEccCCh
Q 018072 253 PIQEVIAEMTN--GGVDRSVECTGNI 276 (361)
Q Consensus 253 ~~~~~i~~~~~--~g~Dvvid~~g~~ 276 (361)
...+.+..+.. +++|+++++.+.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 23333333322 3799999998875
No 488
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.18 E-value=1.7 Score=40.02 Aligned_cols=61 Identities=20% Similarity=0.173 Sum_probs=46.9
Q ss_pred hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCCEEEcCC
Q 018072 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS 248 (361)
Q Consensus 188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~--~~~~~~~~~~~~G~~~vv~~~ 248 (361)
.....++||.+|+=--+|..|...+.+|+.+|.+-++++. -+.+|.++++.+|+..+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 4556699999554444599999999999999995555553 467899999999998766554
No 489
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.17 E-value=0.53 Score=43.55 Aligned_cols=94 Identities=17% Similarity=0.151 Sum_probs=56.3
Q ss_pred CEEEEEcCCHHHHHHHH-HHHHcCCCeEEEEcCChh--hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072 197 SSVAVFGLGAVGLAAAE-GARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 197 ~~VlI~G~g~vG~~a~~-~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~ 273 (361)
-+|.|+|.|.+|...+. +.+..+.+-+.+++.+++ .++.++++|..... .+ +...+....-..+|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~----~~--ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA----EG--IDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc----CC--HHHHHhCcCCCCCCEEEECC
Confidence 57999999999987444 444335534445566654 45667788864322 11 33333321013699999999
Q ss_pred CChHHHHHHHHHhcCCCcEEEEEcC
Q 018072 274 GNIDNMISAFECVHDGWGVAVLVGV 298 (361)
Q Consensus 274 g~~~~~~~~~~~l~~~~G~iv~~g~ 298 (361)
+.....+.+...+.. |+.++.-.
T Consensus 79 ~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 79 SAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CHHHHHHHHHHHHHc--CCeEEECC
Confidence 986565565555554 56555543
No 490
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.09 E-value=0.25 Score=44.66 Aligned_cols=103 Identities=20% Similarity=0.238 Sum_probs=60.9
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCC------hhhHHHHHHcCCC-EE--EcCCCCCccHHHHHHHHc
Q 018072 195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS------SKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMT 262 (361)
Q Consensus 195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~------~~~~~~~~~~G~~-~v--v~~~~~~~~~~~~i~~~~ 262 (361)
.|.+++|+|+ +++|.+.++.+...|+ +|+.+.++ ++..+.+.+.+.. .. .|..+. ..+.+.+....
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDD-AQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCH-HHHHHHHHHHH
Confidence 4678999986 4999999988888999 77766433 2233333332221 22 222222 12333333332
Q ss_pred C--CCccEEEEccCCh-------HH----------------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072 263 N--GGVDRSVECTGNI-------DN----------------------MISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 263 ~--~g~Dvvid~~g~~-------~~----------------------~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
. +.+|++++++|.. .. ....++.|+.. |+++.++...
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~ 150 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG 150 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence 2 3799999998732 10 13456667776 9998887543
No 491
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=94.09 E-value=0.47 Score=42.32 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=28.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~ 229 (361)
+|||+|+|++|...+..+...|.+++..+|.+
T Consensus 1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D 32 (234)
T cd01484 1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMD 32 (234)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 48999999999999999999999899888765
No 492
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.06 E-value=0.46 Score=43.92 Aligned_cols=95 Identities=21% Similarity=0.212 Sum_probs=65.9
Q ss_pred ccccchhhhhhhhhhhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCc
Q 018072 175 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252 (361)
Q Consensus 175 ~l~~~~~ta~~a~~~~~~~-~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~ 252 (361)
.+||.....+. +++..++ -.|.+|.|+|. +.+|.-.+.++...|+ +|++..+....
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~~-------------------- 195 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRSTD-------------------- 195 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCCC--------------------
Confidence 34544333332 3444444 46899999998 5999999999999998 89888554321
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072 253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300 (361)
Q Consensus 253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 300 (361)
..+.. ...|+|+-++|.+..++..+ ++++ ..++.+|...
T Consensus 196 -l~e~~-----~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~ 234 (301)
T PRK14194 196 -AKALC-----RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR 234 (301)
T ss_pred -HHHHH-----hcCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence 22222 14799999999987777655 8886 8888998543
No 493
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.05 E-value=0.38 Score=44.44 Aligned_cols=82 Identities=18% Similarity=0.259 Sum_probs=53.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCcc----HHHHHHHHcCCCccEEEEcc
Q 018072 198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP----IQEVIAEMTNGGVDRSVECT 273 (361)
Q Consensus 198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~----~~~~i~~~~~~g~Dvvid~~ 273 (361)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|... + +.+.. ........ +.+|+||-++
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~~~~~--~~~d~vila~ 74 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E--DGEITVPVLAADDPAEL--GPQDLVILAV 74 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c--CCceeecccCCCChhHc--CCCCEEEEec
Confidence 58999999999988888777887 8999999888888777666532 0 00000 00011111 3689999998
Q ss_pred CChHHHHHHHHHhc
Q 018072 274 GNIDNMISAFECVH 287 (361)
Q Consensus 274 g~~~~~~~~~~~l~ 287 (361)
... ....+++.++
T Consensus 75 k~~-~~~~~~~~l~ 87 (304)
T PRK06522 75 KAY-QLPAALPSLA 87 (304)
T ss_pred ccc-cHHHHHHHHh
Confidence 763 3344444444
No 494
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.04 E-value=0.42 Score=42.24 Aligned_cols=79 Identities=28% Similarity=0.336 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHHH----HHHcCCCE-EE--cCCCCCccHHHHHHHHcC--
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN-- 263 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~----~~~~G~~~-vv--~~~~~~~~~~~~i~~~~~-- 263 (361)
.+.++||+|+ |.+|...+..+...|+ +|+++.++.. +.+. ++..+... .+ |..+. ..+.+.+.....
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA-ESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence 3468999998 9999999999888898 6766655543 2222 22233332 22 22221 123333333322
Q ss_pred CCccEEEEccCC
Q 018072 264 GGVDRSVECTGN 275 (361)
Q Consensus 264 ~g~Dvvid~~g~ 275 (361)
+++|.++.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 268999999874
No 495
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.03 E-value=0.43 Score=45.03 Aligned_cols=37 Identities=32% Similarity=0.546 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR 232 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~ 232 (361)
.|.+|.|+|.|.+|...++.++..|. +|++++++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 89999887543
No 496
>PLN02928 oxidoreductase family protein
Probab=94.02 E-value=0.47 Score=45.03 Aligned_cols=35 Identities=31% Similarity=0.554 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230 (361)
Q Consensus 195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~ 230 (361)
.|.++.|+|.|.+|...++.++.+|. +|++++++.
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW 192 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence 57899999999999999999999999 999998863
No 497
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.01 E-value=0.41 Score=44.48 Aligned_cols=80 Identities=24% Similarity=0.290 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHH----HHHcCCCEEEcC-CCCC-ccHHHHHHHHc-CCC
Q 018072 195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEE----AKKFGVTDFVNT-SEHD-RPIQEVIAEMT-NGG 265 (361)
Q Consensus 195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~----~~~~G~~~vv~~-~~~~-~~~~~~i~~~~-~~g 265 (361)
.|.++||+|+ +++|...++.+...|+ +|+..++.. ++.+. +++.|....... +-.+ ....+.+.... -+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4678999988 8999999988888898 788887643 33322 233444332221 1122 11222222211 247
Q ss_pred ccEEEEccCC
Q 018072 266 VDRSVECTGN 275 (361)
Q Consensus 266 ~Dvvid~~g~ 275 (361)
+|++|+++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 498
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=94.01 E-value=0.066 Score=29.00 Aligned_cols=22 Identities=18% Similarity=0.125 Sum_probs=15.9
Q ss_pred eeEEEeecCCCCeEEEEeecCCC
Q 018072 11 CKAAVAWEAGKPLIIQDVEVAPP 33 (361)
Q Consensus 11 m~a~~~~~~~~~~~~~~~~~p~~ 33 (361)
|||+++.++++ ++++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999998 99999999875
No 499
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.99 E-value=0.81 Score=40.38 Aligned_cols=102 Identities=20% Similarity=0.135 Sum_probs=60.6
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEc-------CCCCCcc-HHHHHHHH
Q 018072 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEM 261 (361)
Q Consensus 191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~-------~~~~~~~-~~~~i~~~ 261 (361)
..+.++.+||+.|+|- |.-++-+|. .|. .|+++|.++..++.+ ++.+...... +...+-+ +...+.++
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 3456778999999875 666766764 688 899999999988765 3333321100 0000000 00011111
Q ss_pred c--C-CCccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEE
Q 018072 262 T--N-GGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLV 296 (361)
Q Consensus 262 ~--~-~g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~ 296 (361)
. . +.||.|+|..- .+..+....++|+++ |++.++
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1 1 26899998652 123577888899997 875554
No 500
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.98 E-value=0.3 Score=43.28 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=49.6
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072 199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275 (361)
Q Consensus 199 VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~ 275 (361)
|+|+|+ |.+|...++.+...+. +|.++.|+.. +.+.++..|+..+ ..+-.+ . +.+..... |+|.||.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~--~-~~l~~al~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD--P-ESLVAALK-GVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT---H-HHHHHHHT-TCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC--H-HHHHHHHc-CCceEEeecCc
Confidence 789998 9999999999988887 7888878764 4566677888654 222222 2 23333222 79999999883
Done!