Query 018075
Match_columns 361
No_of_seqs 134 out of 1529
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 05:56:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018075.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018075hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024 Sorbitol dehydrogenase 100.0 7.3E-63 1.6E-67 422.5 32.9 347 11-360 1-351 (354)
2 COG1064 AdhP Zn-dependent alco 100.0 6E-62 1.3E-66 430.3 32.8 331 12-361 1-337 (339)
3 PRK09880 L-idonate 5-dehydroge 100.0 9.5E-54 2.1E-58 394.7 37.9 337 13-361 3-343 (343)
4 COG1062 AdhC Zn-dependent alco 100.0 3E-54 6.6E-59 372.8 31.1 338 13-361 1-366 (366)
5 cd08239 THR_DH_like L-threonin 100.0 2.2E-50 4.7E-55 372.2 37.9 335 15-361 1-339 (339)
6 KOG0023 Alcohol dehydrogenase, 100.0 5.1E-51 1.1E-55 348.8 30.7 336 11-361 6-354 (360)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 1.5E-49 3.2E-54 370.5 37.8 326 23-359 18-371 (371)
8 PLN02740 Alcohol dehydrogenase 100.0 2.3E-49 5E-54 370.2 37.6 343 11-361 7-381 (381)
9 PLN02827 Alcohol dehydrogenase 100.0 6.2E-49 1.3E-53 366.4 37.3 336 14-361 12-376 (378)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 6.9E-49 1.5E-53 364.4 37.2 336 14-360 1-357 (358)
11 COG1063 Tdh Threonine dehydrog 100.0 6E-49 1.3E-53 361.0 36.0 336 15-360 1-349 (350)
12 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.1E-48 4.6E-53 362.0 38.3 337 15-361 2-368 (368)
13 KOG0022 Alcohol dehydrogenase, 100.0 5.8E-49 1.3E-53 334.5 30.5 339 14-361 7-375 (375)
14 COG0604 Qor NADPH:quinone redu 100.0 8.8E-49 1.9E-53 355.2 33.5 308 16-361 2-326 (326)
15 TIGR02819 fdhA_non_GSH formald 100.0 2.7E-48 5.9E-53 362.7 36.2 336 15-361 3-390 (393)
16 PRK10309 galactitol-1-phosphat 100.0 7.6E-48 1.7E-52 356.2 37.9 335 15-361 1-346 (347)
17 cd08301 alcohol_DH_plants Plan 100.0 7.5E-48 1.6E-52 359.0 37.6 337 14-359 2-368 (369)
18 cd08300 alcohol_DH_class_III c 100.0 1.1E-47 2.3E-52 357.6 38.1 337 14-360 2-368 (368)
19 PLN02586 probable cinnamyl alc 100.0 1.3E-47 2.8E-52 355.4 35.9 333 11-361 9-353 (360)
20 cd08233 butanediol_DH_like (2R 100.0 4E-47 8.6E-52 352.0 38.3 340 15-360 1-351 (351)
21 PLN02178 cinnamyl-alcohol dehy 100.0 2.6E-47 5.7E-52 354.4 36.2 321 23-361 16-348 (375)
22 cd08277 liver_alcohol_DH_like 100.0 7.7E-47 1.7E-51 351.5 37.5 335 15-360 3-365 (365)
23 PLN02702 L-idonate 5-dehydroge 100.0 2.3E-46 5E-51 348.5 39.6 353 9-361 12-364 (364)
24 TIGR03201 dearomat_had 6-hydro 100.0 7.5E-47 1.6E-51 349.6 35.9 333 19-361 3-349 (349)
25 cd08230 glucose_DH Glucose deh 100.0 8.7E-47 1.9E-51 350.0 35.5 330 16-361 2-355 (355)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.3E-46 2.8E-51 344.7 34.5 312 24-359 13-328 (329)
27 KOG1197 Predicted quinone oxid 100.0 1.5E-47 3.3E-52 316.2 25.0 308 12-360 6-329 (336)
28 cd08237 ribitol-5-phosphate_DH 100.0 2.8E-46 6E-51 344.3 30.6 325 14-361 2-339 (341)
29 PLN02514 cinnamyl-alcohol dehy 100.0 6.2E-45 1.3E-49 337.4 36.4 329 15-361 10-350 (357)
30 PRK10083 putative oxidoreducta 100.0 3E-44 6.6E-49 331.3 37.1 335 15-361 1-337 (339)
31 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.1E-44 2.4E-49 329.0 32.0 306 14-360 1-308 (308)
32 cd08231 MDR_TM0436_like Hypoth 100.0 7.3E-44 1.6E-48 331.4 37.8 337 16-360 2-360 (361)
33 cd08238 sorbose_phosphate_red 100.0 1.4E-43 3E-48 334.1 36.7 329 14-360 2-367 (410)
34 cd08256 Zn_ADH2 Alcohol dehydr 100.0 4.3E-43 9.2E-48 325.0 37.8 339 15-359 1-350 (350)
35 cd08285 NADP_ADH NADP(H)-depen 100.0 5.6E-43 1.2E-47 324.3 38.0 338 15-361 1-351 (351)
36 cd08299 alcohol_DH_class_I_II_ 100.0 1.5E-42 3.2E-47 323.2 38.3 337 15-361 8-373 (373)
37 cd05285 sorbitol_DH Sorbitol d 100.0 1E-42 2.3E-47 321.5 36.9 337 18-360 2-342 (343)
38 cd08296 CAD_like Cinnamyl alco 100.0 1.7E-42 3.8E-47 318.6 36.7 329 15-360 1-333 (333)
39 cd08232 idonate-5-DH L-idonate 100.0 4.2E-42 9.1E-47 317.0 36.4 334 19-361 2-339 (339)
40 cd05279 Zn_ADH1 Liver alcohol 100.0 1.7E-41 3.6E-46 315.7 36.9 333 16-359 2-364 (365)
41 cd08283 FDH_like_1 Glutathione 100.0 2.7E-41 5.9E-46 316.3 37.6 338 15-360 1-385 (386)
42 cd05284 arabinose_DH_like D-ar 100.0 3.1E-41 6.7E-46 311.4 36.5 333 16-361 2-340 (340)
43 cd08278 benzyl_alcohol_DH Benz 100.0 3.2E-41 6.9E-46 313.8 36.7 334 13-360 1-365 (365)
44 cd05278 FDH_like Formaldehyde 100.0 3E-41 6.4E-46 312.4 36.1 336 16-360 2-346 (347)
45 cd08246 crotonyl_coA_red croto 100.0 2.4E-41 5.1E-46 317.9 35.6 342 11-360 9-392 (393)
46 cd08262 Zn_ADH8 Alcohol dehydr 100.0 6.4E-41 1.4E-45 309.4 36.8 328 16-360 2-341 (341)
47 PRK05396 tdh L-threonine 3-deh 100.0 7.6E-41 1.6E-45 308.8 36.6 336 16-361 2-340 (341)
48 cd08242 MDR_like Medium chain 100.0 7.6E-41 1.6E-45 306.1 36.0 317 16-360 2-318 (319)
49 cd08284 FDH_like_2 Glutathione 100.0 1E-40 2.2E-45 308.4 37.1 333 16-360 2-343 (344)
50 cd08286 FDH_like_ADH2 formalde 100.0 1.4E-40 3E-45 307.6 37.8 338 15-361 1-345 (345)
51 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1E-40 2.3E-45 312.3 37.2 331 23-359 36-383 (384)
52 cd08287 FDH_like_ADH3 formalde 100.0 2.2E-40 4.8E-45 306.3 36.5 334 15-360 1-344 (345)
53 cd08235 iditol_2_DH_like L-idi 100.0 5E-40 1.1E-44 303.7 37.5 334 16-360 2-343 (343)
54 cd05283 CAD1 Cinnamyl alcohol 100.0 1.9E-40 4.1E-45 305.6 34.5 326 17-360 2-337 (337)
55 cd08261 Zn_ADH7 Alcohol dehydr 100.0 8.7E-40 1.9E-44 301.3 38.1 334 16-361 2-337 (337)
56 cd08279 Zn_ADH_class_III Class 100.0 6.5E-40 1.4E-44 304.9 37.3 334 15-358 1-362 (363)
57 cd08282 PFDH_like Pseudomonas 100.0 7.3E-40 1.6E-44 305.7 37.6 333 16-361 2-375 (375)
58 cd05281 TDH Threonine dehydrog 100.0 5.8E-40 1.3E-44 302.9 36.5 335 16-360 2-340 (341)
59 cd08240 6_hydroxyhexanoate_dh_ 100.0 6.6E-40 1.4E-44 303.6 36.8 335 16-360 2-349 (350)
60 cd08263 Zn_ADH10 Alcohol dehyd 100.0 6.7E-40 1.4E-44 305.4 36.6 335 16-360 2-367 (367)
61 cd08291 ETR_like_1 2-enoyl thi 100.0 2.4E-40 5.2E-45 303.4 32.8 304 16-360 2-324 (324)
62 TIGR01751 crot-CoA-red crotony 100.0 4.9E-40 1.1E-44 309.2 35.2 343 11-361 4-387 (398)
63 TIGR00692 tdh L-threonine 3-de 100.0 6.2E-40 1.4E-44 302.6 35.3 329 24-361 9-340 (340)
64 cd08236 sugar_DH NAD(P)-depend 100.0 1.7E-39 3.8E-44 300.0 36.6 333 15-359 1-343 (343)
65 PRK09422 ethanol-active dehydr 100.0 2.2E-39 4.8E-44 298.8 36.3 330 15-360 1-335 (338)
66 PLN03154 putative allyl alcoho 100.0 1.1E-39 2.4E-44 301.0 34.1 309 9-361 3-345 (348)
67 cd08234 threonine_DH_like L-th 100.0 3.5E-39 7.5E-44 297.0 36.6 331 15-359 1-333 (334)
68 cd08260 Zn_ADH6 Alcohol dehydr 100.0 6.5E-39 1.4E-43 296.5 37.5 334 16-360 2-344 (345)
69 PRK13771 putative alcohol dehy 100.0 3.4E-39 7.4E-44 297.0 33.8 326 15-360 1-332 (334)
70 cd08297 CAD3 Cinnamyl alcohol 100.0 1.6E-38 3.4E-43 293.4 37.2 333 16-361 2-341 (341)
71 cd08293 PTGR2 Prostaglandin re 100.0 5.3E-39 1.2E-43 297.1 32.9 298 24-361 21-345 (345)
72 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.2E-38 4.8E-43 292.0 36.6 333 15-361 1-338 (338)
73 TIGR03366 HpnZ_proposed putati 100.0 1.9E-39 4.1E-44 291.0 25.2 260 73-340 1-279 (280)
74 KOG0025 Zn2+-binding dehydroge 100.0 1E-38 2.2E-43 268.6 27.7 314 8-359 13-350 (354)
75 cd08295 double_bond_reductase_ 100.0 1.7E-38 3.6E-43 292.8 31.8 295 24-361 19-338 (338)
76 TIGR02825 B4_12hDH leukotriene 100.0 1.7E-38 3.6E-43 291.2 31.1 289 22-360 15-325 (325)
77 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.3E-37 2.8E-42 286.2 36.1 326 16-360 2-332 (332)
78 cd08298 CAD2 Cinnamyl alcohol 100.0 1.1E-37 2.3E-42 286.5 35.1 319 16-359 2-329 (329)
79 cd08292 ETR_like_2 2-enoyl thi 100.0 1.1E-37 2.3E-42 285.8 33.9 305 16-360 2-324 (324)
80 cd08294 leukotriene_B4_DH_like 100.0 7.6E-38 1.6E-42 287.4 32.7 287 24-361 19-329 (329)
81 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.3E-36 2.9E-41 280.2 36.1 333 16-361 2-342 (342)
82 cd08264 Zn_ADH_like2 Alcohol d 100.0 4.7E-37 1E-41 281.7 32.8 317 16-357 2-324 (325)
83 cd08274 MDR9 Medium chain dehy 100.0 1.1E-36 2.4E-41 282.1 33.9 323 16-360 2-349 (350)
84 cd08245 CAD Cinnamyl alcohol d 100.0 3.3E-36 7.2E-41 276.7 34.7 325 16-359 1-330 (330)
85 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.3E-36 5E-41 274.6 32.5 297 16-322 2-306 (306)
86 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.2E-35 2.7E-40 270.7 33.8 300 22-359 3-311 (312)
87 COG2130 Putative NADP-dependen 100.0 4.2E-36 9.2E-41 255.4 27.6 292 24-361 25-338 (340)
88 cd08244 MDR_enoyl_red Possible 100.0 2.4E-35 5.2E-40 270.2 34.6 310 16-361 2-324 (324)
89 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.4E-35 3.1E-40 273.1 31.7 298 23-360 14-334 (336)
90 cd08290 ETR 2-enoyl thioester 100.0 1.9E-35 4.1E-40 272.9 32.4 311 15-361 1-341 (341)
91 cd08270 MDR4 Medium chain dehy 100.0 1.2E-34 2.6E-39 263.3 33.0 285 23-361 11-305 (305)
92 PRK10754 quinone oxidoreductas 100.0 7.5E-35 1.6E-39 267.4 31.1 308 15-360 2-326 (327)
93 PTZ00354 alcohol dehydrogenase 100.0 2.4E-34 5.1E-39 264.7 34.3 308 14-361 1-328 (334)
94 cd08276 MDR7 Medium chain dehy 100.0 5.1E-34 1.1E-38 262.6 36.2 329 15-361 1-336 (336)
95 cd08250 Mgc45594_like Mgc45594 100.0 5.4E-34 1.2E-38 261.9 33.2 296 24-360 16-329 (329)
96 cd08249 enoyl_reductase_like e 100.0 2.5E-34 5.4E-39 265.0 30.2 313 15-361 1-339 (339)
97 KOG1198 Zinc-binding oxidoredu 100.0 1.4E-34 3.1E-39 262.4 27.9 299 24-361 18-345 (347)
98 cd05282 ETR_like 2-enoyl thioe 100.0 5.8E-34 1.3E-38 260.9 31.8 296 25-360 13-323 (323)
99 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 8.3E-34 1.8E-38 260.1 32.4 308 15-361 1-325 (325)
100 TIGR02823 oxido_YhdH putative 100.0 1.6E-33 3.5E-38 258.0 32.6 305 17-361 2-323 (323)
101 cd08243 quinone_oxidoreductase 100.0 2.7E-33 5.8E-38 256.0 31.8 296 24-359 13-319 (320)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 3.4E-33 7.4E-38 256.2 32.4 309 16-361 2-326 (326)
103 cd08252 AL_MDR Arginate lyase 100.0 2.6E-32 5.6E-37 251.4 33.3 306 16-360 2-336 (336)
104 cd05288 PGDH Prostaglandin deh 100.0 2E-32 4.4E-37 251.4 31.6 292 24-359 18-329 (329)
105 cd08253 zeta_crystallin Zeta-c 100.0 5.4E-32 1.2E-36 247.5 33.3 303 24-361 13-325 (325)
106 cd08288 MDR_yhdh Yhdh putative 100.0 8E-32 1.7E-36 246.9 33.6 306 16-361 2-324 (324)
107 cd05276 p53_inducible_oxidored 100.0 1.1E-31 2.3E-36 245.2 33.8 304 16-359 2-323 (323)
108 cd08248 RTN4I1 Human Reticulon 100.0 1.7E-32 3.7E-37 254.0 28.7 296 26-360 16-350 (350)
109 cd08273 MDR8 Medium chain dehy 100.0 8E-32 1.7E-36 247.6 31.9 291 24-359 13-330 (331)
110 cd08272 MDR6 Medium chain dehy 100.0 1.5E-31 3.3E-36 244.8 33.1 306 16-361 2-326 (326)
111 cd08247 AST1_like AST1 is a cy 100.0 1.4E-31 2.9E-36 248.2 32.9 315 16-361 2-352 (352)
112 cd08271 MDR5 Medium chain dehy 100.0 1.5E-31 3.2E-36 245.0 32.2 308 15-361 1-325 (325)
113 cd05286 QOR2 Quinone oxidoredu 100.0 5.1E-31 1.1E-35 240.4 33.3 295 24-360 12-319 (320)
114 cd05188 MDR Medium chain reduc 100.0 2.2E-31 4.8E-36 237.4 28.5 266 40-318 1-270 (271)
115 cd08251 polyketide_synthase po 100.0 6.3E-31 1.4E-35 238.3 31.0 288 33-359 2-303 (303)
116 TIGR02824 quinone_pig3 putativ 100.0 2.1E-30 4.5E-35 237.1 33.3 298 24-361 13-325 (325)
117 cd08268 MDR2 Medium chain dehy 100.0 5.8E-30 1.3E-34 234.5 35.0 311 16-361 2-328 (328)
118 cd05289 MDR_like_2 alcohol deh 100.0 1.7E-30 3.6E-35 236.0 29.4 300 16-359 2-309 (309)
119 cd08267 MDR1 Medium chain dehy 100.0 2.4E-30 5.1E-35 236.4 29.8 295 27-359 15-319 (319)
120 cd08241 QOR1 Quinone oxidoredu 100.0 8.5E-30 1.8E-34 232.8 32.8 304 16-360 2-323 (323)
121 cd08275 MDR3 Medium chain dehy 100.0 1.5E-29 3.4E-34 232.8 34.3 296 24-361 12-337 (337)
122 KOG1202 Animal-type fatty acid 100.0 5.1E-31 1.1E-35 254.9 15.8 314 2-361 1400-1741(2376)
123 cd05195 enoyl_red enoyl reduct 100.0 1.1E-28 2.4E-33 221.9 28.2 276 39-359 1-293 (293)
124 cd08255 2-desacetyl-2-hydroxye 100.0 2.3E-28 4.9E-33 219.1 26.3 246 67-359 17-277 (277)
125 smart00829 PKS_ER Enoylreducta 100.0 6.8E-28 1.5E-32 216.5 27.8 271 43-359 2-288 (288)
126 KOG1196 Predicted NAD-dependen 100.0 5.4E-26 1.2E-30 193.2 25.6 293 24-361 20-340 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 7.3E-23 1.6E-27 156.5 8.6 109 38-149 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 2.9E-16 6.3E-21 124.1 13.7 128 189-321 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.4 8.8E-12 1.9E-16 115.5 18.2 172 167-359 188-374 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 3.7E-12 8E-17 120.9 15.9 155 176-331 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 2E-12 4.3E-17 101.6 4.4 117 222-359 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.7 1.5E-07 3.2E-12 84.0 12.6 172 173-358 72-258 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.6 5E-07 1.1E-11 86.0 13.0 108 177-285 162-287 (511)
134 PRK00517 prmA ribosomal protei 98.5 3.6E-06 7.8E-11 74.0 15.1 136 134-285 78-216 (250)
135 COG2518 Pcm Protein-L-isoaspar 98.5 1.9E-06 4.1E-11 71.8 10.7 106 166-282 60-169 (209)
136 PRK05476 S-adenosyl-L-homocyst 98.3 1.1E-05 2.5E-10 75.3 13.5 103 167-286 198-303 (425)
137 cd05213 NAD_bind_Glutamyl_tRNA 98.3 2.8E-06 6E-11 77.2 9.0 108 144-264 139-251 (311)
138 PRK08306 dipicolinate synthase 98.3 3.3E-05 7.1E-10 69.5 15.8 113 178-306 151-263 (296)
139 TIGR00936 ahcY adenosylhomocys 98.1 5.5E-05 1.2E-09 70.4 13.9 102 167-285 181-285 (406)
140 TIGR01035 hemA glutamyl-tRNA r 98.0 3.3E-07 7.1E-12 86.5 -3.5 158 73-263 89-252 (417)
141 PLN02494 adenosylhomocysteinas 98.0 0.00014 3E-09 68.4 12.8 101 168-285 241-344 (477)
142 TIGR00406 prmA ribosomal prote 97.9 8E-05 1.7E-09 66.9 10.6 128 143-284 126-261 (288)
143 COG2264 PrmA Ribosomal protein 97.9 0.00014 3.1E-09 64.4 11.4 141 134-286 120-267 (300)
144 COG2242 CobL Precorrin-6B meth 97.9 0.00021 4.6E-09 58.4 11.4 102 171-281 27-134 (187)
145 TIGR00518 alaDH alanine dehydr 97.9 0.00012 2.6E-09 68.0 11.2 97 178-284 166-269 (370)
146 PRK00377 cbiT cobalt-precorrin 97.9 0.00027 5.9E-09 59.8 11.9 102 171-280 33-143 (198)
147 PF01135 PCMT: Protein-L-isoas 97.9 8.2E-05 1.8E-09 63.2 8.6 104 169-281 63-171 (209)
148 PRK00045 hemA glutamyl-tRNA re 97.8 4.1E-05 8.9E-10 72.6 7.3 159 73-263 91-254 (423)
149 TIGR02853 spore_dpaA dipicolin 97.8 0.0003 6.4E-09 63.0 11.4 99 178-290 150-248 (287)
150 PRK12771 putative glutamate sy 97.8 2.5E-05 5.5E-10 77.1 4.4 81 175-263 133-234 (564)
151 PF06325 PrmA: Ribosomal prote 97.8 0.00011 2.4E-09 65.5 8.1 139 134-287 119-264 (295)
152 PRK13943 protein-L-isoaspartat 97.7 0.00052 1.1E-08 62.3 12.1 103 170-281 72-179 (322)
153 PRK13942 protein-L-isoaspartat 97.7 0.001 2.2E-08 57.0 13.3 103 170-281 68-175 (212)
154 PRK08324 short chain dehydroge 97.7 0.00042 9E-09 70.0 12.0 141 133-284 385-559 (681)
155 PF12847 Methyltransf_18: Meth 97.6 0.00028 6.2E-09 53.5 7.5 93 178-280 1-109 (112)
156 TIGR02469 CbiT precorrin-6Y C5 97.6 0.002 4.3E-08 49.7 12.2 102 172-281 13-121 (124)
157 PTZ00075 Adenosylhomocysteinas 97.6 0.0012 2.6E-08 62.5 12.6 93 176-285 251-344 (476)
158 TIGR00080 pimt protein-L-isoas 97.6 0.0017 3.8E-08 55.7 12.8 103 170-281 69-176 (215)
159 PRK14967 putative methyltransf 97.5 0.0023 4.9E-08 55.3 12.6 99 171-281 29-158 (223)
160 PF01488 Shikimate_DH: Shikima 97.5 0.00066 1.4E-08 53.6 8.4 74 177-262 10-86 (135)
161 PRK13944 protein-L-isoaspartat 97.5 0.0036 7.8E-08 53.3 13.4 103 170-281 64-172 (205)
162 PF02353 CMAS: Mycolic acid cy 97.3 0.0014 3.1E-08 58.2 9.0 99 171-281 55-165 (273)
163 PRK11705 cyclopropane fatty ac 97.3 0.0029 6.3E-08 59.1 11.1 99 172-282 161-267 (383)
164 COG2230 Cfa Cyclopropane fatty 97.3 0.0045 9.8E-08 54.5 11.5 103 171-286 65-180 (283)
165 PF11017 DUF2855: Protein of u 97.2 0.05 1.1E-06 48.8 17.9 98 176-285 133-234 (314)
166 COG4221 Short-chain alcohol de 97.2 0.01 2.2E-07 50.9 12.8 82 178-262 5-92 (246)
167 PRK07402 precorrin-6B methylas 97.2 0.011 2.4E-07 49.8 13.3 104 171-282 33-142 (196)
168 PRK00107 gidB 16S rRNA methylt 97.2 0.0051 1.1E-07 51.4 10.4 98 175-282 42-145 (187)
169 PRK05786 fabG 3-ketoacyl-(acyl 97.1 0.015 3.2E-07 50.5 13.7 105 178-284 4-137 (238)
170 COG2226 UbiE Methylase involve 97.1 0.0098 2.1E-07 51.4 11.9 108 172-288 45-162 (238)
171 COG2227 UbiG 2-polyprenyl-3-me 97.1 0.0054 1.2E-07 52.3 9.8 95 177-281 58-160 (243)
172 PRK05993 short chain dehydroge 97.1 0.0055 1.2E-07 54.7 10.7 81 178-260 3-85 (277)
173 KOG1209 1-Acyl dihydroxyaceton 97.1 0.011 2.3E-07 49.4 11.1 112 178-291 6-147 (289)
174 TIGR00438 rrmJ cell division p 97.1 0.013 2.8E-07 49.0 12.0 101 174-282 28-146 (188)
175 PRK00312 pcm protein-L-isoaspa 97.0 0.018 3.9E-07 49.2 13.1 102 170-282 70-175 (212)
176 COG0300 DltE Short-chain dehyd 97.0 0.019 4.1E-07 50.4 12.8 84 177-262 4-95 (265)
177 PRK12742 oxidoreductase; Provi 97.0 0.013 2.9E-07 50.7 12.1 101 178-284 5-133 (237)
178 COG2519 GCD14 tRNA(1-methylade 96.9 0.018 3.9E-07 49.6 11.4 106 171-285 87-198 (256)
179 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0089 1.9E-07 49.6 9.5 90 177-283 34-128 (178)
180 COG1748 LYS9 Saccharopine dehy 96.9 0.011 2.5E-07 54.6 10.9 96 180-283 2-100 (389)
181 KOG1205 Predicted dehydrogenas 96.9 0.023 5E-07 50.3 12.3 112 178-291 11-158 (282)
182 PRK08261 fabG 3-ketoacyl-(acyl 96.8 0.026 5.6E-07 54.3 13.5 103 178-283 209-343 (450)
183 PRK08317 hypothetical protein; 96.8 0.017 3.7E-07 50.0 11.2 104 171-283 12-125 (241)
184 PF01262 AlaDh_PNT_C: Alanine 96.8 0.0043 9.3E-08 51.0 6.8 100 178-282 19-139 (168)
185 COG0686 Ald Alanine dehydrogen 96.7 0.0086 1.9E-07 52.8 8.1 98 178-284 167-270 (371)
186 PLN03075 nicotianamine synthas 96.7 0.011 2.4E-07 52.6 9.0 99 177-282 122-233 (296)
187 PLN02233 ubiquinone biosynthes 96.7 0.027 5.8E-07 49.9 11.5 105 172-285 67-185 (261)
188 PRK01581 speE spermidine synth 96.7 0.041 8.9E-07 50.4 12.6 98 177-282 149-268 (374)
189 PRK04457 spermidine synthase; 96.7 0.028 6.2E-07 49.7 11.5 97 177-281 65-176 (262)
190 PRK04266 fibrillarin; Provisio 96.7 0.044 9.5E-07 47.3 12.3 104 172-281 66-175 (226)
191 PRK14103 trans-aconitate 2-met 96.7 0.033 7.1E-07 49.1 11.8 98 170-281 21-125 (255)
192 COG3288 PntA NAD/NADP transhyd 96.6 0.015 3.2E-07 51.2 9.1 132 176-308 161-310 (356)
193 PRK08017 oxidoreductase; Provi 96.6 0.018 4E-07 50.5 10.2 80 180-261 3-84 (256)
194 PRK11207 tellurite resistance 96.6 0.013 2.7E-07 49.6 8.4 98 173-282 25-134 (197)
195 PF01209 Ubie_methyltran: ubiE 96.6 0.0077 1.7E-07 52.2 7.2 107 172-287 41-158 (233)
196 PRK08287 cobalt-precorrin-6Y C 96.6 0.049 1.1E-06 45.5 11.9 100 171-281 24-130 (187)
197 TIGR02752 MenG_heptapren 2-hep 96.6 0.038 8.3E-07 47.8 11.6 105 171-284 38-153 (231)
198 TIGR00446 nop2p NOL1/NOP2/sun 96.6 0.085 1.8E-06 46.8 13.8 99 174-281 67-198 (264)
199 PRK06182 short chain dehydroge 96.6 0.024 5.2E-07 50.4 10.5 81 178-261 2-84 (273)
200 PRK00811 spermidine synthase; 96.5 0.019 4.1E-07 51.4 9.5 97 177-281 75-190 (283)
201 TIGR00138 gidB 16S rRNA methyl 96.5 0.023 5E-07 47.2 9.3 94 178-281 42-141 (181)
202 PRK12828 short chain dehydroge 96.5 0.074 1.6E-06 45.9 13.1 81 178-261 6-92 (239)
203 PRK08618 ornithine cyclodeamin 96.5 0.063 1.4E-06 49.1 12.8 99 172-285 120-224 (325)
204 PRK05693 short chain dehydroge 96.5 0.027 5.9E-07 50.1 10.3 79 180-261 2-82 (274)
205 PRK13940 glutamyl-tRNA reducta 96.5 0.032 7E-07 52.6 10.9 75 176-262 178-253 (414)
206 TIGR03840 TMPT_Se_Te thiopurin 96.5 0.059 1.3E-06 46.0 11.7 101 176-283 32-153 (213)
207 COG4122 Predicted O-methyltran 96.4 0.07 1.5E-06 45.4 11.9 104 174-282 55-166 (219)
208 PLN02244 tocopherol O-methyltr 96.4 0.062 1.3E-06 49.6 12.6 97 177-283 117-224 (340)
209 PLN02781 Probable caffeoyl-CoA 96.4 0.061 1.3E-06 46.7 11.8 106 174-282 64-178 (234)
210 PTZ00098 phosphoethanolamine N 96.4 0.042 9.2E-07 48.7 11.1 106 169-283 43-157 (263)
211 TIGR00417 speE spermidine synt 96.4 0.032 6.9E-07 49.7 10.3 98 177-281 71-185 (270)
212 TIGR02356 adenyl_thiF thiazole 96.4 0.059 1.3E-06 45.7 11.4 35 178-212 20-54 (202)
213 PRK06079 enoyl-(acyl carrier p 96.4 0.095 2.1E-06 46.0 13.2 81 178-261 6-93 (252)
214 PRK07326 short chain dehydroge 96.4 0.084 1.8E-06 45.6 12.7 82 178-261 5-92 (237)
215 PRK11036 putative S-adenosyl-L 96.4 0.024 5.1E-07 50.0 9.2 96 177-282 43-149 (255)
216 PRK08265 short chain dehydroge 96.4 0.089 1.9E-06 46.4 13.0 81 178-261 5-90 (261)
217 PLN02366 spermidine synthase 96.4 0.051 1.1E-06 49.1 11.4 98 177-281 90-205 (308)
218 TIGR00477 tehB tellurite resis 96.4 0.025 5.4E-07 47.7 8.9 96 174-282 26-133 (195)
219 PRK03369 murD UDP-N-acetylmura 96.4 0.023 5E-07 55.2 9.8 74 175-262 8-81 (488)
220 PRK06505 enoyl-(acyl carrier p 96.4 0.12 2.5E-06 46.1 13.6 82 178-261 6-95 (271)
221 cd01065 NAD_bind_Shikimate_DH 96.4 0.038 8.3E-07 44.5 9.6 103 170-284 9-118 (155)
222 PRK01683 trans-aconitate 2-met 96.4 0.084 1.8E-06 46.5 12.6 100 171-282 24-130 (258)
223 PLN03209 translocon at the inn 96.3 0.07 1.5E-06 52.1 12.6 45 173-218 74-119 (576)
224 PF00670 AdoHcyase_NAD: S-aden 96.3 0.043 9.3E-07 44.2 9.4 95 174-285 18-113 (162)
225 PRK08339 short chain dehydroge 96.3 0.094 2E-06 46.4 12.8 81 178-261 7-95 (263)
226 PRK07502 cyclohexadienyl dehyd 96.3 0.059 1.3E-06 48.9 11.7 91 180-283 7-101 (307)
227 PRK04148 hypothetical protein; 96.3 0.057 1.2E-06 42.1 9.7 95 175-281 13-108 (134)
228 PF08704 GCD14: tRNA methyltra 96.3 0.017 3.6E-07 50.4 7.5 110 171-285 33-149 (247)
229 PLN02476 O-methyltransferase 96.3 0.079 1.7E-06 47.0 11.8 105 174-281 114-227 (278)
230 TIGR00563 rsmB ribosomal RNA s 96.3 0.084 1.8E-06 50.3 12.8 104 171-281 231-367 (426)
231 PF13460 NAD_binding_10: NADH( 96.2 0.076 1.7E-06 43.9 11.1 92 182-284 1-99 (183)
232 TIGR01470 cysG_Nterm siroheme 96.2 0.16 3.6E-06 43.0 13.0 90 178-281 8-99 (205)
233 PRK08267 short chain dehydroge 96.2 0.1 2.2E-06 45.9 12.4 80 180-261 2-87 (260)
234 PRK08415 enoyl-(acyl carrier p 96.2 0.19 4.1E-06 44.8 14.1 105 178-284 4-145 (274)
235 TIGR01809 Shik-DH-AROM shikima 96.2 0.024 5.1E-07 50.8 8.1 76 178-262 124-201 (282)
236 cd05311 NAD_bind_2_malic_enz N 96.2 0.1 2.2E-06 45.0 11.7 100 169-282 14-128 (226)
237 PRK14903 16S rRNA methyltransf 96.2 0.11 2.5E-06 49.4 13.0 101 173-281 232-365 (431)
238 PRK00121 trmB tRNA (guanine-N( 96.1 0.078 1.7E-06 44.9 10.5 98 178-281 40-155 (202)
239 KOG1201 Hydroxysteroid 17-beta 96.1 0.12 2.5E-06 45.8 11.5 83 177-262 36-125 (300)
240 PRK06057 short chain dehydroge 96.1 0.069 1.5E-06 46.9 10.5 81 178-261 6-89 (255)
241 PRK10258 biotin biosynthesis p 96.1 0.44 9.6E-06 41.7 15.6 100 172-284 36-142 (251)
242 PRK06139 short chain dehydroge 96.1 0.071 1.5E-06 49.0 10.8 81 178-261 6-94 (330)
243 PRK07576 short chain dehydroge 96.0 0.23 4.9E-06 43.9 13.7 81 178-260 8-95 (264)
244 PRK07806 short chain dehydroge 96.0 0.14 3.1E-06 44.6 12.2 104 178-283 5-135 (248)
245 PF01596 Methyltransf_3: O-met 96.0 0.048 1E-06 46.2 8.7 104 175-282 42-155 (205)
246 PF03435 Saccharop_dh: Sacchar 96.0 0.054 1.2E-06 50.9 10.0 93 182-281 1-97 (386)
247 PLN02823 spermine synthase 96.0 0.11 2.4E-06 47.6 11.4 97 178-281 103-219 (336)
248 PRK07574 formate dehydrogenase 96.0 0.15 3.3E-06 47.6 12.5 92 178-285 191-287 (385)
249 PRK03612 spermidine synthase; 95.9 0.078 1.7E-06 51.8 11.1 97 177-281 296-414 (521)
250 PRK14901 16S rRNA methyltransf 95.9 0.11 2.4E-06 49.6 12.0 104 173-281 247-383 (434)
251 PRK12549 shikimate 5-dehydroge 95.9 0.087 1.9E-06 47.2 10.5 46 177-222 125-171 (284)
252 PRK06719 precorrin-2 dehydroge 95.9 0.25 5.3E-06 40.0 12.2 83 178-276 12-94 (157)
253 PRK12939 short chain dehydroge 95.9 0.2 4.3E-06 43.6 12.8 82 178-261 6-94 (250)
254 PF02254 TrkA_N: TrkA-N domain 95.9 0.28 6.1E-06 37.2 12.1 92 182-281 1-95 (116)
255 PRK07060 short chain dehydroge 95.9 0.084 1.8E-06 45.9 10.2 78 178-261 8-87 (245)
256 PRK07109 short chain dehydroge 95.9 0.23 5E-06 45.7 13.5 82 178-261 7-95 (334)
257 PRK06463 fabG 3-ketoacyl-(acyl 95.9 0.079 1.7E-06 46.5 10.1 81 178-261 6-89 (255)
258 PRK06949 short chain dehydroge 95.9 0.099 2.1E-06 45.8 10.7 83 177-261 7-96 (258)
259 PF00106 adh_short: short chai 95.9 0.18 3.8E-06 40.9 11.5 82 180-262 1-91 (167)
260 PRK06500 short chain dehydroge 95.9 0.28 6E-06 42.7 13.5 82 178-261 5-90 (249)
261 PRK06718 precorrin-2 dehydroge 95.9 0.28 6.1E-06 41.5 12.8 89 178-281 9-99 (202)
262 PF08241 Methyltransf_11: Meth 95.9 0.055 1.2E-06 39.1 7.6 85 184-280 2-95 (95)
263 COG0169 AroE Shikimate 5-dehyd 95.9 0.035 7.6E-07 49.4 7.6 48 176-223 123-171 (283)
264 PRK05872 short chain dehydroge 95.9 0.093 2E-06 47.3 10.6 81 178-261 8-95 (296)
265 PRK07814 short chain dehydroge 95.8 0.083 1.8E-06 46.6 10.0 82 178-261 9-97 (263)
266 PRK08159 enoyl-(acyl carrier p 95.8 0.34 7.3E-06 43.1 13.9 83 177-261 8-98 (272)
267 PRK06398 aldose dehydrogenase; 95.8 0.059 1.3E-06 47.5 8.9 76 178-261 5-82 (258)
268 PRK09186 flagellin modificatio 95.8 0.23 5.1E-06 43.4 12.7 80 178-260 3-92 (256)
269 KOG1252 Cystathionine beta-syn 95.8 0.34 7.4E-06 43.5 13.2 56 172-228 96-155 (362)
270 PTZ00146 fibrillarin; Provisio 95.8 0.14 3E-06 45.6 11.0 107 169-281 123-236 (293)
271 PLN03139 formate dehydrogenase 95.8 0.17 3.8E-06 47.2 12.1 92 178-285 198-294 (386)
272 COG3967 DltE Short-chain dehyd 95.8 0.098 2.1E-06 43.6 9.1 82 178-262 4-89 (245)
273 TIGR03215 ac_ald_DH_ac acetald 95.8 0.15 3.3E-06 45.5 11.1 89 181-281 3-94 (285)
274 TIGR03325 BphB_TodD cis-2,3-di 95.7 0.093 2E-06 46.3 10.0 80 178-260 4-88 (262)
275 PRK06841 short chain dehydroge 95.7 0.086 1.9E-06 46.2 9.7 82 178-261 14-99 (255)
276 PRK13255 thiopurine S-methyltr 95.7 0.12 2.5E-06 44.4 10.1 101 174-281 33-154 (218)
277 PRK10901 16S rRNA methyltransf 95.7 0.23 5E-06 47.3 13.1 103 171-281 237-371 (427)
278 PRK11188 rrmJ 23S rRNA methylt 95.7 0.17 3.8E-06 43.1 11.1 98 176-282 49-165 (209)
279 PRK07831 short chain dehydroge 95.7 0.11 2.3E-06 45.9 10.1 84 176-261 14-107 (262)
280 PRK08644 thiamine biosynthesis 95.7 0.17 3.6E-06 43.3 10.8 35 178-212 27-61 (212)
281 PRK06180 short chain dehydroge 95.7 0.087 1.9E-06 46.9 9.6 82 178-261 3-88 (277)
282 TIGR02355 moeB molybdopterin s 95.7 0.18 3.9E-06 44.0 11.1 35 179-213 24-58 (240)
283 cd01487 E1_ThiF_like E1_ThiF_l 95.7 0.14 3E-06 42.3 9.9 33 181-213 1-33 (174)
284 cd01075 NAD_bind_Leu_Phe_Val_D 95.7 0.19 4E-06 42.6 10.9 88 177-282 26-114 (200)
285 PRK06200 2,3-dihydroxy-2,3-dih 95.7 0.091 2E-06 46.4 9.6 82 178-261 5-90 (263)
286 COG0373 HemA Glutamyl-tRNA red 95.7 0.14 3E-06 47.9 10.9 73 177-262 176-249 (414)
287 PRK06484 short chain dehydroge 95.7 0.31 6.8E-06 47.7 14.2 106 177-284 267-402 (520)
288 KOG2017 Molybdopterin synthase 95.7 0.034 7.3E-07 49.8 6.5 34 178-211 65-98 (427)
289 PRK12823 benD 1,6-dihydroxycyc 95.6 0.31 6.7E-06 42.8 12.8 80 178-260 7-93 (260)
290 PRK00536 speE spermidine synth 95.6 0.079 1.7E-06 46.6 8.6 99 177-281 71-170 (262)
291 PRK08217 fabG 3-ketoacyl-(acyl 95.6 0.17 3.7E-06 44.0 11.1 81 178-260 4-91 (253)
292 PRK14902 16S rRNA methyltransf 95.6 0.24 5.3E-06 47.4 12.8 101 173-281 245-378 (444)
293 PRK13243 glyoxylate reductase; 95.6 0.3 6.4E-06 44.9 12.7 90 178-285 149-243 (333)
294 PRK07688 thiamine/molybdopteri 95.6 0.18 3.9E-06 46.4 11.3 35 178-212 23-57 (339)
295 PRK08300 acetaldehyde dehydrog 95.6 0.17 3.8E-06 45.3 10.8 94 180-282 5-101 (302)
296 PRK14904 16S rRNA methyltransf 95.6 0.26 5.6E-06 47.3 12.8 102 171-282 243-377 (445)
297 PRK08177 short chain dehydroge 95.6 0.11 2.4E-06 44.6 9.5 78 180-261 2-81 (225)
298 PRK12749 quinate/shikimate deh 95.6 0.12 2.5E-06 46.5 9.8 56 168-223 112-172 (288)
299 PRK00216 ubiE ubiquinone/menaq 95.6 0.25 5.5E-06 42.7 11.9 107 171-285 44-161 (239)
300 PRK08628 short chain dehydroge 95.5 0.1 2.2E-06 45.8 9.4 82 178-261 6-93 (258)
301 PRK12335 tellurite resistance 95.5 0.046 9.9E-07 49.1 7.1 92 178-282 120-223 (287)
302 PRK12429 3-hydroxybutyrate deh 95.5 0.25 5.5E-06 43.1 11.9 82 178-261 3-91 (258)
303 PRK09072 short chain dehydroge 95.5 0.13 2.8E-06 45.4 10.0 81 178-261 4-90 (263)
304 PRK05866 short chain dehydroge 95.5 0.18 3.8E-06 45.5 11.0 82 178-261 39-127 (293)
305 PRK12475 thiamine/molybdopteri 95.5 0.2 4.4E-06 46.0 11.4 36 178-213 23-58 (338)
306 PRK08328 hypothetical protein; 95.5 0.22 4.8E-06 43.1 11.1 35 178-212 26-60 (231)
307 PF13241 NAD_binding_7: Putati 95.5 0.15 3.2E-06 38.0 8.8 89 178-285 6-94 (103)
308 PRK07774 short chain dehydroge 95.5 0.14 2.9E-06 44.7 10.0 82 178-261 5-93 (250)
309 PF01408 GFO_IDH_MocA: Oxidore 95.5 0.35 7.6E-06 36.8 11.2 86 181-279 2-90 (120)
310 KOG1270 Methyltransferases [Co 95.5 0.052 1.1E-06 47.0 6.8 97 179-282 90-195 (282)
311 PLN02589 caffeoyl-CoA O-methyl 95.5 0.29 6.4E-06 42.7 11.7 103 174-280 75-188 (247)
312 TIGR02354 thiF_fam2 thiamine b 95.5 0.26 5.7E-06 41.6 11.1 35 178-212 20-54 (200)
313 PRK07832 short chain dehydroge 95.4 0.47 1E-05 42.0 13.4 78 181-261 2-88 (272)
314 PRK08703 short chain dehydroge 95.4 0.15 3.3E-06 44.1 10.1 83 178-261 5-97 (239)
315 COG0031 CysK Cysteine synthase 95.4 0.51 1.1E-05 42.1 13.2 60 170-229 53-114 (300)
316 PLN02490 MPBQ/MSBQ methyltrans 95.4 0.096 2.1E-06 48.0 8.9 105 171-283 105-216 (340)
317 PRK08589 short chain dehydroge 95.4 0.14 3.1E-06 45.4 10.0 81 178-261 5-92 (272)
318 PRK08862 short chain dehydroge 95.4 0.18 3.8E-06 43.6 10.2 82 178-260 4-92 (227)
319 PRK12747 short chain dehydroge 95.4 0.41 9E-06 41.8 12.8 107 178-285 3-147 (252)
320 PRK07533 enoyl-(acyl carrier p 95.4 0.18 3.8E-06 44.5 10.4 82 178-261 9-98 (258)
321 PF13847 Methyltransf_31: Meth 95.4 0.13 2.8E-06 41.3 8.7 98 177-283 2-111 (152)
322 PRK06101 short chain dehydroge 95.4 0.36 7.9E-06 41.9 12.2 41 180-221 2-43 (240)
323 COG0421 SpeE Spermidine syntha 95.4 0.22 4.8E-06 44.4 10.7 95 180-281 78-189 (282)
324 TIGR00537 hemK_rel_arch HemK-r 95.4 0.13 2.7E-06 42.7 8.8 94 175-282 16-140 (179)
325 PRK07677 short chain dehydroge 95.4 0.17 3.7E-06 44.3 10.2 81 179-261 1-88 (252)
326 cd01078 NAD_bind_H4MPT_DH NADP 95.3 0.4 8.8E-06 40.2 12.0 77 177-262 26-108 (194)
327 PF07991 IlvN: Acetohydroxy ac 95.3 0.35 7.5E-06 39.0 10.6 88 178-281 3-94 (165)
328 cd01483 E1_enzyme_family Super 95.3 0.36 7.8E-06 38.3 11.1 32 181-212 1-32 (143)
329 PRK11933 yebU rRNA (cytosine-C 95.3 0.39 8.4E-06 46.2 12.9 98 175-280 110-240 (470)
330 PRK05597 molybdopterin biosynt 95.3 0.21 4.5E-06 46.3 10.9 36 178-213 27-62 (355)
331 PRK06483 dihydromonapterin red 95.3 0.18 4E-06 43.6 10.1 80 179-261 2-84 (236)
332 PF00899 ThiF: ThiF family; I 95.3 0.15 3.2E-06 40.1 8.6 97 179-282 2-124 (135)
333 PRK06128 oxidoreductase; Provi 95.3 0.49 1.1E-05 42.7 13.2 105 178-284 54-193 (300)
334 PRK06953 short chain dehydroge 95.3 0.14 3.1E-06 43.8 9.3 77 180-261 2-80 (222)
335 PLN02336 phosphoethanolamine N 95.3 0.081 1.8E-06 51.2 8.4 103 172-283 260-370 (475)
336 PRK07024 short chain dehydroge 95.3 0.18 3.9E-06 44.3 10.0 81 179-261 2-88 (257)
337 PRK07825 short chain dehydroge 95.2 0.17 3.8E-06 44.8 10.0 80 179-261 5-88 (273)
338 PRK08594 enoyl-(acyl carrier p 95.2 0.56 1.2E-05 41.3 13.0 104 178-284 6-149 (257)
339 PRK12937 short chain dehydroge 95.2 0.57 1.2E-05 40.6 13.0 105 178-284 4-141 (245)
340 PLN02396 hexaprenyldihydroxybe 95.2 0.13 2.9E-06 46.8 9.0 96 177-282 130-235 (322)
341 PRK15116 sulfur acceptor prote 95.2 0.65 1.4E-05 41.1 13.1 35 178-212 29-63 (268)
342 COG0144 Sun tRNA and rRNA cyto 95.2 0.29 6.2E-06 45.4 11.4 103 172-280 150-286 (355)
343 PRK06172 short chain dehydroge 95.2 0.19 4E-06 44.0 9.9 82 178-261 6-94 (253)
344 PRK05690 molybdopterin biosynt 95.2 0.26 5.6E-06 43.1 10.6 35 178-212 31-65 (245)
345 PRK07340 ornithine cyclodeamin 95.2 0.18 3.9E-06 45.7 9.8 101 172-285 118-220 (304)
346 PRK07478 short chain dehydroge 95.2 0.19 4.1E-06 44.0 9.9 82 178-261 5-93 (254)
347 PRK08642 fabG 3-ketoacyl-(acyl 95.2 0.18 3.9E-06 44.0 9.7 83 178-260 4-90 (253)
348 PRK15469 ghrA bifunctional gly 95.2 0.24 5.2E-06 45.0 10.6 90 178-285 135-229 (312)
349 PRK08261 fabG 3-ketoacyl-(acyl 95.2 0.077 1.7E-06 51.0 7.9 92 174-285 29-126 (450)
350 TIGR00452 methyltransferase, p 95.1 0.27 5.8E-06 44.7 10.7 100 172-281 115-224 (314)
351 PRK15451 tRNA cmo(5)U34 methyl 95.1 0.061 1.3E-06 47.2 6.5 97 176-283 54-165 (247)
352 TIGR00507 aroE shikimate 5-deh 95.1 0.39 8.4E-06 42.7 11.7 104 169-286 106-218 (270)
353 PF13659 Methyltransf_26: Meth 95.1 0.066 1.4E-06 40.7 6.0 95 179-281 1-114 (117)
354 COG2521 Predicted archaeal met 95.1 0.1 2.2E-06 44.4 7.2 111 162-282 118-245 (287)
355 PRK06196 oxidoreductase; Provi 95.1 0.19 4.1E-06 45.7 10.0 82 178-261 25-109 (315)
356 TIGR01832 kduD 2-deoxy-D-gluco 95.1 0.32 7E-06 42.3 11.0 82 178-261 4-90 (248)
357 PRK12550 shikimate 5-dehydroge 95.1 0.12 2.6E-06 45.9 8.2 76 168-260 111-187 (272)
358 cd05211 NAD_bind_Glu_Leu_Phe_V 95.1 0.63 1.4E-05 39.8 12.4 47 177-223 21-77 (217)
359 PRK05134 bifunctional 3-demeth 95.1 0.16 3.4E-06 44.0 8.9 98 174-282 44-151 (233)
360 PRK06484 short chain dehydroge 95.0 0.45 9.7E-06 46.6 13.0 82 177-261 3-89 (520)
361 PRK13656 trans-2-enoyl-CoA red 95.0 0.53 1.2E-05 43.7 12.3 83 177-262 39-142 (398)
362 PRK07904 short chain dehydroge 95.0 0.25 5.4E-06 43.4 10.0 83 176-261 5-97 (253)
363 PRK05867 short chain dehydroge 95.0 0.27 5.9E-06 43.0 10.3 82 178-261 8-96 (253)
364 PRK07985 oxidoreductase; Provi 94.9 0.53 1.1E-05 42.4 12.2 105 178-284 48-187 (294)
365 PRK08264 short chain dehydroge 94.9 0.15 3.3E-06 44.1 8.4 77 178-261 5-83 (238)
366 PRK07453 protochlorophyllide o 94.9 0.23 5.1E-06 45.3 10.0 80 178-260 5-92 (322)
367 PRK06198 short chain dehydroge 94.9 0.31 6.8E-06 42.7 10.5 84 177-261 4-94 (260)
368 PRK07062 short chain dehydroge 94.9 0.28 6.1E-06 43.2 10.2 81 178-261 7-97 (265)
369 PRK07231 fabG 3-ketoacyl-(acyl 94.9 0.3 6.6E-06 42.4 10.4 82 178-261 4-91 (251)
370 PRK12746 short chain dehydroge 94.9 0.58 1.3E-05 40.8 12.1 84 178-261 5-100 (254)
371 PRK14192 bifunctional 5,10-met 94.9 0.26 5.6E-06 44.0 9.8 85 169-285 148-234 (283)
372 PRK12548 shikimate 5-dehydroge 94.9 0.19 4.2E-06 45.1 9.1 37 177-213 124-160 (289)
373 PRK07856 short chain dehydroge 94.9 0.19 4.1E-06 44.0 9.0 78 178-261 5-85 (252)
374 PRK07035 short chain dehydroge 94.9 0.27 5.8E-06 43.0 9.9 82 178-261 7-95 (252)
375 PRK15068 tRNA mo(5)U34 methylt 94.8 0.18 3.9E-06 46.0 9.0 97 174-281 118-225 (322)
376 PRK05884 short chain dehydroge 94.8 0.24 5.1E-06 42.6 9.4 74 181-260 2-78 (223)
377 PLN02253 xanthoxin dehydrogena 94.8 0.26 5.7E-06 43.8 10.0 81 178-261 17-104 (280)
378 PF03446 NAD_binding_2: NAD bi 94.8 0.73 1.6E-05 37.5 11.8 91 180-286 2-98 (163)
379 PRK06603 enoyl-(acyl carrier p 94.8 0.3 6.6E-06 43.0 10.3 81 178-261 7-96 (260)
380 PRK14175 bifunctional 5,10-met 94.8 0.4 8.6E-06 42.7 10.7 86 168-285 146-233 (286)
381 PRK06179 short chain dehydroge 94.8 0.12 2.6E-06 45.7 7.7 79 178-261 3-83 (270)
382 PRK05562 precorrin-2 dehydroge 94.8 1.2 2.7E-05 38.1 13.3 91 178-282 24-116 (223)
383 PRK14968 putative methyltransf 94.8 0.15 3.3E-06 42.3 7.9 43 176-221 21-63 (188)
384 PRK06940 short chain dehydroge 94.8 0.6 1.3E-05 41.5 12.2 99 180-282 3-125 (275)
385 PRK07454 short chain dehydroge 94.8 0.37 7.9E-06 41.8 10.6 83 177-261 4-93 (241)
386 COG0623 FabI Enoyl-[acyl-carri 94.8 0.93 2E-05 38.7 12.1 110 176-286 3-148 (259)
387 cd00755 YgdL_like Family of ac 94.8 0.43 9.2E-06 41.3 10.6 35 179-213 11-45 (231)
388 PRK08226 short chain dehydroge 94.8 0.28 6E-06 43.2 9.9 82 178-261 5-92 (263)
389 PLN02780 ketoreductase/ oxidor 94.8 0.26 5.6E-06 45.0 9.9 80 178-261 52-142 (320)
390 PRK07890 short chain dehydroge 94.8 0.28 6.1E-06 42.9 9.9 83 177-261 3-92 (258)
391 PRK06701 short chain dehydroge 94.8 1 2.3E-05 40.4 13.7 107 176-284 43-183 (290)
392 PRK11088 rrmA 23S rRNA methylt 94.8 0.25 5.3E-06 44.0 9.5 95 177-283 84-182 (272)
393 TIGR01318 gltD_gamma_fam gluta 94.8 0.18 4E-06 48.6 9.2 77 178-262 140-237 (467)
394 PRK08993 2-deoxy-D-gluconate 3 94.7 0.3 6.4E-06 42.8 9.9 82 178-261 9-95 (253)
395 PRK05854 short chain dehydroge 94.7 0.31 6.8E-06 44.3 10.3 81 178-261 13-103 (313)
396 PLN02928 oxidoreductase family 94.7 0.55 1.2E-05 43.4 11.8 98 178-285 158-265 (347)
397 PRK08690 enoyl-(acyl carrier p 94.7 0.35 7.6E-06 42.7 10.3 82 178-261 5-94 (261)
398 COG1179 Dinucleotide-utilizing 94.7 0.37 8.1E-06 41.3 9.6 103 178-285 29-156 (263)
399 PRK12829 short chain dehydroge 94.7 0.29 6.3E-06 43.0 9.7 85 176-262 8-97 (264)
400 KOG0725 Reductases with broad 94.7 0.26 5.6E-06 43.8 9.3 85 177-262 6-100 (270)
401 cd01080 NAD_bind_m-THF_DH_Cycl 94.6 0.54 1.2E-05 38.5 10.4 88 166-285 30-119 (168)
402 COG1052 LdhA Lactate dehydroge 94.6 0.84 1.8E-05 41.6 12.6 90 178-285 145-239 (324)
403 PRK07370 enoyl-(acyl carrier p 94.6 0.7 1.5E-05 40.6 12.0 105 178-284 5-149 (258)
404 PRK03659 glutathione-regulated 94.6 0.43 9.2E-06 47.7 11.7 94 180-281 401-497 (601)
405 cd00757 ThiF_MoeB_HesA_family 94.6 0.55 1.2E-05 40.6 11.0 33 179-211 21-53 (228)
406 PRK07523 gluconate 5-dehydroge 94.6 0.41 9E-06 41.9 10.5 82 178-261 9-97 (255)
407 PRK05876 short chain dehydroge 94.6 0.3 6.6E-06 43.5 9.7 82 178-261 5-93 (275)
408 PRK06124 gluconate 5-dehydroge 94.6 0.35 7.7E-06 42.3 10.1 82 178-261 10-98 (256)
409 PRK12743 oxidoreductase; Provi 94.6 0.3 6.5E-06 42.8 9.6 81 179-261 2-90 (256)
410 PRK08762 molybdopterin biosynt 94.6 0.43 9.3E-06 44.7 11.0 35 178-212 134-168 (376)
411 PRK10669 putative cation:proto 94.6 0.44 9.5E-06 47.2 11.6 93 180-280 418-513 (558)
412 TIGR02072 BioC biotin biosynth 94.6 0.48 1E-05 40.9 10.7 98 177-283 33-136 (240)
413 PRK06141 ornithine cyclodeamin 94.5 0.72 1.6E-05 42.0 12.1 101 172-285 118-222 (314)
414 PRK08340 glucose-1-dehydrogena 94.5 0.46 9.9E-06 41.7 10.6 79 181-261 2-86 (259)
415 PRK12744 short chain dehydroge 94.5 0.62 1.3E-05 40.8 11.5 83 178-261 7-99 (257)
416 PRK09291 short chain dehydroge 94.5 0.14 3.1E-06 44.8 7.3 75 179-260 2-82 (257)
417 TIGR01934 MenG_MenH_UbiE ubiqu 94.5 0.46 9.9E-06 40.6 10.4 105 172-285 33-146 (223)
418 TIGR00091 tRNA (guanine-N(7)-) 94.5 0.8 1.7E-05 38.5 11.5 98 178-281 16-131 (194)
419 PRK05717 oxidoreductase; Valid 94.5 0.47 1E-05 41.5 10.6 83 177-261 8-94 (255)
420 PRK06194 hypothetical protein; 94.5 0.47 1E-05 42.3 10.8 82 178-261 5-93 (287)
421 TIGR02992 ectoine_eutC ectoine 94.5 0.8 1.7E-05 41.9 12.3 94 177-284 127-226 (326)
422 PRK12480 D-lactate dehydrogena 94.5 1.1 2.4E-05 41.1 13.1 88 178-285 145-237 (330)
423 COG0334 GdhA Glutamate dehydro 94.4 0.73 1.6E-05 42.8 11.7 45 169-214 196-241 (411)
424 PRK07424 bifunctional sterol d 94.4 0.35 7.5E-06 45.7 10.0 38 178-216 177-215 (406)
425 PRK13256 thiopurine S-methyltr 94.4 0.5 1.1E-05 40.6 10.1 105 174-283 39-164 (226)
426 PRK13403 ketol-acid reductoiso 94.4 0.66 1.4E-05 42.0 11.1 89 176-281 13-105 (335)
427 PRK06125 short chain dehydroge 94.4 0.49 1.1E-05 41.5 10.5 79 178-261 6-91 (259)
428 PLN03013 cysteine synthase 94.4 2.1 4.5E-05 40.6 14.9 57 172-228 167-226 (429)
429 PRK08063 enoyl-(acyl carrier p 94.4 0.32 6.9E-06 42.3 9.3 83 178-261 3-92 (250)
430 PRK08643 acetoin reductase; Va 94.4 0.49 1.1E-05 41.4 10.5 81 179-261 2-89 (256)
431 PRK06482 short chain dehydroge 94.4 0.41 8.9E-06 42.5 10.0 80 180-261 3-86 (276)
432 PRK08213 gluconate 5-dehydroge 94.3 0.54 1.2E-05 41.2 10.7 82 178-261 11-99 (259)
433 PF10727 Rossmann-like: Rossma 94.3 0.12 2.6E-06 40.1 5.5 80 179-275 10-91 (127)
434 TIGR01532 E4PD_g-proteo D-eryt 94.3 0.5 1.1E-05 43.1 10.4 102 181-284 1-122 (325)
435 PRK12809 putative oxidoreducta 94.3 0.26 5.6E-06 49.7 9.4 77 178-262 309-406 (639)
436 PRK06138 short chain dehydroge 94.3 0.51 1.1E-05 41.1 10.4 82 178-261 4-91 (252)
437 PRK13394 3-hydroxybutyrate deh 94.3 0.6 1.3E-05 40.9 10.9 82 178-261 6-94 (262)
438 PRK05875 short chain dehydroge 94.3 0.54 1.2E-05 41.7 10.7 81 178-260 6-95 (276)
439 PRK03562 glutathione-regulated 94.3 0.35 7.6E-06 48.4 10.2 94 179-280 400-496 (621)
440 PRK12938 acetyacetyl-CoA reduc 94.3 0.42 9.1E-06 41.5 9.8 82 178-261 2-91 (246)
441 PRK07074 short chain dehydroge 94.3 0.5 1.1E-05 41.3 10.3 81 179-261 2-87 (257)
442 PRK05600 thiamine biosynthesis 94.2 0.61 1.3E-05 43.5 11.0 35 178-212 40-74 (370)
443 PRK08223 hypothetical protein; 94.2 0.59 1.3E-05 41.7 10.4 35 178-212 26-60 (287)
444 COG4106 Tam Trans-aconitate me 94.2 0.33 7.2E-06 40.9 8.2 99 170-279 22-126 (257)
445 PRK12481 2-deoxy-D-gluconate 3 94.2 0.6 1.3E-05 40.8 10.7 81 178-261 7-93 (251)
446 cd01492 Aos1_SUMO Ubiquitin ac 94.2 0.61 1.3E-05 39.3 10.2 35 178-212 20-54 (197)
447 PRK12936 3-ketoacyl-(acyl-carr 94.2 0.48 1E-05 41.0 10.0 82 178-261 5-90 (245)
448 PRK07984 enoyl-(acyl carrier p 94.2 0.53 1.1E-05 41.6 10.3 81 178-260 5-93 (262)
449 PRK05479 ketol-acid reductoiso 94.2 0.62 1.4E-05 42.5 10.7 87 177-279 15-105 (330)
450 PRK08277 D-mannonate oxidoredu 94.2 0.56 1.2E-05 41.6 10.6 81 178-260 9-96 (278)
451 PRK06935 2-deoxy-D-gluconate 3 94.2 0.58 1.3E-05 41.0 10.6 82 178-261 14-101 (258)
452 PLN00203 glutamyl-tRNA reducta 94.2 0.64 1.4E-05 45.3 11.4 75 178-262 265-340 (519)
453 PRK08085 gluconate 5-dehydroge 94.1 0.66 1.4E-05 40.5 10.8 82 178-261 8-96 (254)
454 PRK07067 sorbitol dehydrogenas 94.1 0.5 1.1E-05 41.4 9.9 82 178-261 5-90 (257)
455 PRK08263 short chain dehydroge 94.1 0.5 1.1E-05 41.9 10.0 81 179-261 3-87 (275)
456 cd05212 NAD_bind_m-THF_DH_Cycl 94.1 1 2.3E-05 35.5 10.5 85 169-285 17-103 (140)
457 TIGR03206 benzo_BadH 2-hydroxy 94.1 0.66 1.4E-05 40.3 10.6 81 178-260 2-89 (250)
458 PRK09242 tropinone reductase; 94.0 0.7 1.5E-05 40.5 10.8 81 178-261 8-98 (257)
459 PRK07411 hypothetical protein; 94.0 0.6 1.3E-05 43.9 10.7 35 178-212 37-71 (390)
460 PRK10538 malonic semialdehyde 94.0 0.46 9.9E-06 41.4 9.5 78 181-261 2-84 (248)
461 CHL00194 ycf39 Ycf39; Provisio 94.0 0.36 7.9E-06 43.9 9.1 94 181-283 2-110 (317)
462 PRK05653 fabG 3-ketoacyl-(acyl 94.0 0.69 1.5E-05 39.9 10.5 81 178-261 4-92 (246)
463 PRK06914 short chain dehydroge 94.0 0.49 1.1E-05 42.0 9.8 80 179-261 3-91 (280)
464 KOG1661 Protein-L-isoaspartate 94.0 0.15 3.3E-06 42.6 5.8 111 164-281 69-192 (237)
465 PRK12769 putative oxidoreducta 94.0 0.26 5.6E-06 49.8 8.7 78 177-262 325-423 (654)
466 KOG0069 Glyoxylate/hydroxypyru 94.0 0.98 2.1E-05 41.1 11.4 90 177-284 160-255 (336)
467 PRK12367 short chain dehydroge 94.0 0.53 1.2E-05 41.1 9.7 75 178-261 13-89 (245)
468 PRK13303 L-aspartate dehydroge 94.0 0.75 1.6E-05 40.7 10.7 89 181-282 3-92 (265)
469 PF13561 adh_short_C2: Enoyl-( 94.0 0.47 1E-05 41.2 9.4 95 188-284 6-135 (241)
470 PF02670 DXP_reductoisom: 1-de 93.9 1.3 2.8E-05 34.4 10.5 94 182-279 1-118 (129)
471 PRK14027 quinate/shikimate deh 93.9 0.29 6.3E-06 43.8 8.0 43 177-219 125-167 (283)
472 PRK07063 short chain dehydroge 93.9 0.49 1.1E-05 41.5 9.5 82 178-261 6-96 (260)
473 PRK08220 2,3-dihydroxybenzoate 93.9 1.5 3.2E-05 38.2 12.5 77 178-261 7-86 (252)
474 TIGR01963 PHB_DH 3-hydroxybuty 93.9 0.51 1.1E-05 41.1 9.6 80 180-261 2-88 (255)
475 PRK12384 sorbitol-6-phosphate 93.9 0.69 1.5E-05 40.5 10.4 81 179-261 2-91 (259)
476 PRK07417 arogenate dehydrogena 93.9 0.66 1.4E-05 41.4 10.3 87 181-282 2-91 (279)
477 KOG1210 Predicted 3-ketosphing 93.8 0.85 1.8E-05 40.7 10.5 86 175-262 29-123 (331)
478 COG4262 Predicted spermidine s 93.8 0.97 2.1E-05 41.2 10.9 99 176-282 287-407 (508)
479 PRK06197 short chain dehydroge 93.8 0.67 1.4E-05 41.9 10.4 82 178-261 15-105 (306)
480 PRK06077 fabG 3-ketoacyl-(acyl 93.8 1.9 4.2E-05 37.4 13.0 107 178-285 5-143 (252)
481 PRK07666 fabG 3-ketoacyl-(acyl 93.8 0.59 1.3E-05 40.4 9.7 82 178-261 6-94 (239)
482 TIGR00872 gnd_rel 6-phosphoglu 93.8 1.9 4E-05 39.0 13.1 43 181-224 2-44 (298)
483 PRK05557 fabG 3-ketoacyl-(acyl 93.8 1.9 4.1E-05 37.2 13.0 83 178-261 4-93 (248)
484 PRK07878 molybdopterin biosynt 93.8 0.76 1.6E-05 43.3 10.9 35 178-212 41-75 (392)
485 PF01113 DapB_N: Dihydrodipico 93.8 1.1 2.3E-05 34.6 10.0 93 181-286 2-101 (124)
486 PRK06436 glycerate dehydrogena 93.8 0.77 1.7E-05 41.5 10.5 87 178-285 121-212 (303)
487 COG0569 TrkA K+ transport syst 93.7 0.62 1.3E-05 40.2 9.5 74 181-262 2-77 (225)
488 PRK14618 NAD(P)H-dependent gly 93.7 0.88 1.9E-05 41.7 11.1 93 180-282 5-104 (328)
489 PRK06181 short chain dehydroge 93.7 0.9 2E-05 39.9 10.9 81 179-261 1-88 (263)
490 cd02440 AdoMet_MTases S-adenos 93.7 0.87 1.9E-05 32.7 9.2 91 182-281 2-103 (107)
491 PRK13302 putative L-aspartate 93.7 0.96 2.1E-05 40.2 10.9 88 180-281 7-97 (271)
492 PRK06720 hypothetical protein; 93.7 1.4 3E-05 36.1 11.0 82 178-261 15-103 (169)
493 PRK07066 3-hydroxybutyryl-CoA 93.6 1.1 2.4E-05 40.8 11.3 38 180-218 8-45 (321)
494 PRK08291 ectoine utilization p 93.6 1.6 3.4E-05 40.1 12.5 93 177-284 130-229 (330)
495 PRK07097 gluconate 5-dehydroge 93.6 0.68 1.5E-05 40.8 10.0 82 178-261 9-97 (265)
496 PRK09134 short chain dehydroge 93.6 0.64 1.4E-05 40.7 9.7 83 178-261 8-97 (258)
497 PF05175 MTS: Methyltransferas 93.6 0.42 9.2E-06 39.2 7.9 98 178-285 31-143 (170)
498 PF03807 F420_oxidored: NADP o 93.6 2 4.4E-05 31.1 11.7 86 181-281 1-93 (96)
499 PRK06932 glycerate dehydrogena 93.6 1.5 3.4E-05 39.8 12.2 86 178-285 146-236 (314)
500 PRK06114 short chain dehydroge 93.5 0.95 2.1E-05 39.6 10.7 82 178-261 7-96 (254)
No 1
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.3e-63 Score=422.49 Aligned_cols=347 Identities=50% Similarity=0.876 Sum_probs=318.2
Q ss_pred CcccceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075 11 DKNQNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (361)
|..+++++++.+++++++++.|.|++ .|+||+|++.++|||.+|+|.+.....+.+..+.|+++|||.+|+|.++|+.|
T Consensus 1 ~~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V 80 (354)
T KOG0024|consen 1 MAADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV 80 (354)
T ss_pred CCcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence 45678999999999999999999997 99999999999999999999998877777767899999999999999999999
Q ss_pred CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHH
Q 018075 90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH 169 (361)
Q Consensus 90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~ 169 (361)
+++++||||+..|..+|+.|.+|..|++++||.+.|.+.+..+|++++|++.++++|+|+|++++++++|++.+++++||
T Consensus 81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~H 160 (354)
T KOG0024|consen 81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVH 160 (354)
T ss_pred cccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh-c
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-M 248 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~ 248 (361)
+.+++++++|++|||+|+|++|+.+...||.+|+..|+.++..+.|++++++||++.+....... +.....+.+... +
T Consensus 161 Acr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g 239 (354)
T KOG0024|consen 161 ACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALG 239 (354)
T ss_pred hhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999887643322 333333333332 2
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCC-cHHHHHHHHHcCCCCCC
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS-TWPLCIEFLRSGKIDVK 327 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~g~~~~~ 327 (361)
...+|++|||+|.....+.++..++.+|+++++|+.....+++......++++++|++.+.+ .+..+++++++|+++.+
T Consensus 240 ~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k 319 (354)
T KOG0024|consen 240 KKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVK 319 (354)
T ss_pred ccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCch
Confidence 35699999999999899999999999999999999999999999999999999999999955 99999999999999999
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCC-ceEEEEe
Q 018075 328 PLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 360 (361)
Q Consensus 328 ~~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~ 360 (361)
+++++.|++ +++.+|++.+..++. .-|+++.
T Consensus 320 ~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 320 PLITHRYKF--DDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred hheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence 999999999 999999999887753 5677764
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=6e-62 Score=430.28 Aligned_cols=331 Identities=32% Similarity=0.511 Sum_probs=296.0
Q ss_pred cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075 12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90 (361)
Q Consensus 12 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 90 (361)
+++|+++++.+. ++++++|++.|+|+++||+|+|+|+|+|++|+|.++|.+.. ..+|+++|||.+|+|+++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~ 77 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVT 77 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCc
Confidence 357788888866 45999999999999999999999999999999999987643 35899999999999999999999
Q ss_pred CCCCCCEEEe-cCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHH
Q 018075 91 SLEVGDRVAL-EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGV 168 (361)
Q Consensus 91 ~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~ 168 (361)
+|++||||.+ +...+|++|.+|+.|+.++|++..+.+. ..+|+|+||+++++++++++|+++++++||.+ +...|+|
T Consensus 78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y 156 (339)
T COG1064 78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY 156 (339)
T ss_pred cCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence 9999999999 7778999999999999999999766664 48999999999999999999999999999955 5788899
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
++|++.+++||++|+|.|.|++|++++|+|+.+|+ .|++++++++|.+++++||++++++.. +.+..+.+++
T Consensus 157 ~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~----- 228 (339)
T COG1064 157 RALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE----- 228 (339)
T ss_pred eehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh-----
Confidence 99999999999999999999999999999999998 799999999999999999999998743 3444444432
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CC-cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCC
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 325 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~ 325 (361)
.+|++||+++ +.+++.+++.|+++|+++++|... .. ..++...++++++++.|+... +.++++++++..+|++
T Consensus 229 --~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~I- 304 (339)
T COG1064 229 --IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKI- 304 (339)
T ss_pred --hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCc-
Confidence 3999999999 779999999999999999999874 33 446677789999999999887 7899999999999999
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 326 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 326 ~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++.+.+.+++ +++++|++.|++++..|++||++
T Consensus 305 -kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 305 -KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred -eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence 6666567889 99999999999999999999874
No 3
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=9.5e-54 Score=394.71 Aligned_cols=337 Identities=29% Similarity=0.561 Sum_probs=291.3
Q ss_pred ccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 13 ~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
-.++++++.+++.+++++++.| ++++||||||.++|+|++|++.+.+...+.....+|.++|||++|+|+++ ++++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~ 79 (343)
T PRK09880 3 VKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL 79 (343)
T ss_pred ccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence 3567888889999999999997 68999999999999999999977532222222467999999999999999 78899
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC----CCCCceeEEEEecCCceEECCCCCCcccccccchhHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV 168 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~ 168 (361)
++||||+..+..+|++|.+|+.|++++|++..+++.. ...|+|+||++++++.++++|++++++++++..++++||
T Consensus 80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~ 159 (343)
T PRK09880 80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAI 159 (343)
T ss_pred CCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHHH
Confidence 9999999999999999999999999999998776531 247999999999999999999999998877777899999
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
+++++....+|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++.+ .++.+ +...
T Consensus 160 ~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~~- 232 (343)
T PRK09880 160 HAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKAE- 232 (343)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhcc-
Confidence 9998877789999999999999999999999999977899999999999999999999887543 33332 2221
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCC
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 328 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~ 328 (361)
..++|++||++|++..++.+++.|+++|+++.+|......+++...+..+++++.++....++++++++++++|++++.+
T Consensus 233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~ 312 (343)
T PRK09880 233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLP 312 (343)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchh
Confidence 23699999999987789999999999999999997655455666677889999999887778899999999999998778
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.++++|+| +++++|++.+.++...||+++..
T Consensus 313 ~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 313 LLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred heEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 88999999 99999999999988889999864
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3e-54 Score=372.81 Aligned_cols=338 Identities=30% Similarity=0.471 Sum_probs=291.7
Q ss_pred ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 13 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
+++++|++.++ ++|+++|+++++|++||||||+.|+|+|++|.+..+|.++ ..+|+++|||++|+|++||++|++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~gVt~ 76 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEGVTS 76 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCCccc
Confidence 36788888876 7999999999999999999999999999999999887543 358999999999999999999999
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccC---------C-----------CCCCCceeEEEEecCCceEECCC
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---------S-----------PPTNGSLAHKVVHPAKLCYKLPD 151 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----------~~~~g~~~~~~~~~~~~~~~vP~ 151 (361)
+++||.|+..+..+||+|.+|..|++++|..+.-.. . ..-.++|+||.++++..++++++
T Consensus 77 vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~ 156 (366)
T COG1062 77 VKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDP 156 (366)
T ss_pred cCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCC
Confidence 999999999999999999999999999999532110 0 11235899999999999999999
Q ss_pred CCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075 152 NVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK 229 (361)
Q Consensus 152 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 229 (361)
+.+++.++++- ...|.+.+. +.+++++|++|.|+|.|++|+++||-|+..|+.++|+++.+++|++++++||+++.++
T Consensus 157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn 236 (366)
T COG1062 157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVN 236 (366)
T ss_pred CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence 99999999885 566777765 5699999999999999999999999999999999999999999999999999999887
Q ss_pred cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhh-hcCcEEEEeecC
Q 018075 230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIFRY 308 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~~ 308 (361)
..+. .+..+.+.+++ ++++|++|||+|....+++++.++.++|+.+.+|.......++.+.+. ....+++|+...
T Consensus 237 ~~~~-~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G 312 (366)
T COG1062 237 PKEV-DDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG 312 (366)
T ss_pred chhh-hhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence 4322 14666665554 669999999999999999999999999999999988766666665542 233778887654
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.++..+++++.+|++++.+++++.++| +|+++|+++|.+|+.. |.||.+
T Consensus 313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~~ 366 (366)
T COG1062 313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIRF 366 (366)
T ss_pred CCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEecC
Confidence 7799999999999999999999999999 9999999999999664 666653
No 5
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=2.2e-50 Score=372.19 Aligned_cols=335 Identities=33% Similarity=0.599 Sum_probs=286.0
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
|+++++.+++.++++++|.|+++++||+|||.++|+|++|++.+.+.... +...|.++|||++|+|+++|++|+++++
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (339)
T cd08239 1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV 78 (339)
T ss_pred CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence 46677778889999999999999999999999999999999887654211 1235889999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccc-cCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR 172 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~ 172 (361)
||+|+..+...|++|..|+.|+++.|++... ++ ....|+|+||+.++.+.++++|+++++++|+.+ .++.+||++++
T Consensus 79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g-~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~ 157 (339)
T cd08239 79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALR 157 (339)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCcCcccccc-cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 9999999889999999999999999997654 22 235799999999999999999999999998866 47889999998
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
...+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .+ .+.+.++. .+.++
T Consensus 158 ~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~~ 232 (339)
T cd08239 158 RVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAGA 232 (339)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCCC
Confidence 888999999999999999999999999999965888999999999999999998877543 23 33343332 34689
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceec-hHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI 330 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 330 (361)
|++||++|+...++.++++|+++|+++.+|..... .+.. ..+..+++++.+++.. .++++++++++++|++++.+.+
T Consensus 233 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i 311 (339)
T cd08239 233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLV 311 (339)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeE
Confidence 99999999886778899999999999999965432 2332 3567789999998876 5789999999999999888889
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+++|+| +++++|++.++++. .||+|+++
T Consensus 312 ~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 312 THRFGL--DQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence 999999 99999999998875 79999875
No 6
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-51 Score=348.77 Aligned_cols=336 Identities=25% Similarity=0.397 Sum_probs=284.4
Q ss_pred CcccceEEEEeeC-C--ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075 11 DKNQNMAAWLLGI-K--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~-~--~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 87 (361)
.|+++++.....+ + ++++.++++|+++++||+|++.|+|+|++|++.+.|.+.. .+.|.++|||.+|+|+++|+
T Consensus 6 ~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~VvkvGs 82 (360)
T KOG0023|consen 6 IPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVKVGS 82 (360)
T ss_pred CchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEEECC
Confidence 3566666555544 3 6788999999999999999999999999999999886533 58899999999999999999
Q ss_pred CCCCCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccc
Q 018075 88 EVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM 160 (361)
Q Consensus 88 ~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~ 160 (361)
+|++|++||||-+-.. .+|+.|.+|..|...+||++-+.. +...+|+|++|+++++.+++++|++++.+.||.
T Consensus 83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAP 162 (360)
T KOG0023|consen 83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAP 162 (360)
T ss_pred CcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccc
Confidence 9999999999988543 589999999999999999643322 234577799999999999999999999999995
Q ss_pred c-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchh
Q 018075 161 C-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVD 238 (361)
Q Consensus 161 ~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~ 238 (361)
+ ....|.|..|.+.++.||+++-|.|+|++|.+++|+||++|. +|++++++. +|.++++.||++..++..+ +.+
T Consensus 163 lLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~d-- 238 (360)
T KOG0023|consen 163 LLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DPD-- 238 (360)
T ss_pred hhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CHH--
Confidence 5 466778999999899999999999987799999999999999 688887776 7778888899999887532 234
Q ss_pred HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHH
Q 018075 239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIE 317 (361)
Q Consensus 239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~ 317 (361)
+++.+.++...++|-|.+. ..-.++.++..|+++|++|++|.+.....++..++.++.+.+.|+... +.+.+++++
T Consensus 239 -~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ld 315 (360)
T KOG0023|consen 239 -IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALD 315 (360)
T ss_pred -HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHH
Confidence 4444544445666766665 334789999999999999999998887788888999999999999876 889999999
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.+++.+ +..+ +..++ +++++|+++|++++..+|.|+++
T Consensus 316 f~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 316 FVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred HHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence 9999999 5545 66788 99999999999999999999874
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.5e-49 Score=370.48 Aligned_cols=326 Identities=33% Similarity=0.516 Sum_probs=278.6
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075 23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP 102 (361)
Q Consensus 23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 102 (361)
++.++++++|.|+|+++||+|||.++|+|++|++...|.. +..+|+++|||++|+|+++|++++++++||||++.+
T Consensus 18 ~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~ 93 (371)
T cd08281 18 SRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVF 93 (371)
T ss_pred CCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCC----CCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEcc
Confidence 3679999999999999999999999999999999887643 235689999999999999999999999999999988
Q ss_pred CcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCceeEEEEecCCceEECCCCCCcccccccc
Q 018075 103 GISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE 162 (361)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~ 162 (361)
..+|+.|..|+.|++++|++...+.. ....|+|+||+.++++.++++|+++++++|+++.
T Consensus 94 ~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~ 173 (371)
T cd08281 94 VPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFG 173 (371)
T ss_pred CCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhc
Confidence 78999999999999999987533210 0013799999999999999999999999998664
Q ss_pred -hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHH
Q 018075 163 -PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 240 (361)
Q Consensus 163 -~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 240 (361)
++.+||+++. ..++++|++|||+|+|++|++++|+||..|+..|++++.+++|.++++++|++.++++.+ .++.+.
T Consensus 174 ~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~--~~~~~~ 251 (371)
T cd08281 174 CAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD--PNAVEQ 251 (371)
T ss_pred chHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCc--hhHHHH
Confidence 6788998874 588999999999999999999999999999966889999999999999999998877532 455555
Q ss_pred HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeecC----CCcHHH
Q 018075 241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY----RSTWPL 314 (361)
Q Consensus 241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~ 314 (361)
++++. +.++|++|||+|.+..++.++++++++|+++.+|.... ...++...++.+++++.+++.. .+++..
T Consensus 252 i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 328 (371)
T cd08281 252 VRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPR 328 (371)
T ss_pred HHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHH
Confidence 55443 34899999999987789999999999999999996543 2345555678899999998764 467889
Q ss_pred HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 315 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
+++++++|++++.+.++++|+| +++++|++.+.+++..+|+++
T Consensus 329 ~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 329 YLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred HHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence 9999999999887889999999 999999999999988877663
No 8
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.3e-49 Score=370.17 Aligned_cols=343 Identities=26% Similarity=0.421 Sum_probs=285.3
Q ss_pred CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075 11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (361)
.+.+|+++++.+++ ++.++++|.|+|+++||+|||.++|+|++|++.+.|... ....+|+++|||++|+|+++|+++
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE--AQRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc--ccCCCCccccccceEEEEEeCCCC
Confidence 45677888888775 589999999999999999999999999999998877532 123568999999999999999999
Q ss_pred CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-----------------------CCCCCceeEEEEecCCce
Q 018075 90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-----------------------PPTNGSLAHKVVHPAKLC 146 (361)
Q Consensus 90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~ 146 (361)
++|++||||++.+..+|+.|.+|..|++..|+++...+. ....|+|+||++++.+.+
T Consensus 85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 999999999999889999999999999999998653211 012599999999999999
Q ss_pred EECCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075 147 YKLPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 224 (361)
Q Consensus 147 ~~vP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 224 (361)
+++|+++++++++.+. .+.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|+
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga 244 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence 9999999999888664 6788998764 5889999999999999999999999999999668999999999999999999
Q ss_pred CEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechHh-hhcCcEE
Q 018075 225 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVDV 302 (361)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i 302 (361)
+.++++.....++.+.+.++. ++++|++||++|++..+..++++++++ |+++.+|.......++.... ++++.++
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 321 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI 321 (381)
T ss_pred cEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence 988775432234555555543 338999999999877899999999996 99999997654322333222 3467889
Q ss_pred EEeecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 303 IGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 303 ~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.|+... ...+.++++++.+|++++.+.++++|+| +++++|++.+.+++. .|++|++
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence 887653 2468899999999999877889999999 999999999988865 6999874
No 9
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=6.2e-49 Score=366.38 Aligned_cols=336 Identities=24% Similarity=0.411 Sum_probs=280.1
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
.|+++++.++ +.++++++|.|+|+++||+|||.++|+|++|++...+. ..+|+++|||++|+|+++|+++++|
T Consensus 12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~vG~~v~~~ 85 (378)
T PLN02827 12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVESIGEGVTEF 85 (378)
T ss_pred eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEEcCCCCccc
Confidence 4566666766 46999999999999999999999999999999887652 1468899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCceeEEEEecCCceEECCCC
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDN 152 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~vP~~ 152 (361)
++||+|++.+..+|+.|.+|+.|.+.+|+++..... ....|+|+||+.++++.++++|++
T Consensus 86 ~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~ 165 (378)
T PLN02827 86 EKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPL 165 (378)
T ss_pred CCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCC
Confidence 999999998888999999999999999998643210 002489999999999999999999
Q ss_pred CCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075 153 VSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 230 (361)
Q Consensus 153 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 230 (361)
+++++|+.+. .+.++|+++. ..++++|++|||+|+|++|++++|+|+.+|+..|++++.++++.++++++|++.++++
T Consensus 166 l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~ 245 (378)
T PLN02827 166 APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245 (378)
T ss_pred CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence 9998888664 5677787664 4789999999999999999999999999999778888889999999999999888775
Q ss_pred CCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceec-hHhhhcCcEEEEeecC
Q 018075 231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY 308 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~ 308 (361)
.....++.+.++++. +.++|++||++|.+..+...++.++++ |+++.+|.......+.. ..++.+++++.|+...
T Consensus 246 ~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 322 (378)
T PLN02827 246 NDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFG 322 (378)
T ss_pred cccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecC
Confidence 432234555555443 348999999999877899999999998 99999997654333333 3577899999988654
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..+++++++++++|++++.+.+++.|+| +++++|++.+.+++. .|+||.+
T Consensus 323 ~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 323 GWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred CCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence 3578899999999999776689999999 999999999998866 6998864
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=6.9e-49 Score=364.42 Aligned_cols=336 Identities=26% Similarity=0.434 Sum_probs=282.0
Q ss_pred cceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 14 QNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 14 ~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+|+++++.+++ +++++++|.|+|+++||+|||.++|+|++|++...|... ..+|+++|||++|+|+++|+++++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~ 76 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV 76 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence 46777777764 599999999999999999999999999999998876431 2568999999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCcccc--------CC----CCCCCceeEEEEecCCceEECCCCCCcccccc
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--------GS----PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM 160 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~ 160 (361)
++||+|++.+...|+.|..|..|++.+|++.... +. ....|+|+||+.++++.++++|+++++++|++
T Consensus 77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~ 156 (358)
T TIGR03451 77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL 156 (358)
T ss_pred CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence 9999999999999999999999999999863211 00 01359999999999999999999999998886
Q ss_pred cc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchh
Q 018075 161 CE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 238 (361)
Q Consensus 161 ~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 238 (361)
+. .+.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++.. .++.
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~ 234 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDPV 234 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCHH
Confidence 64 5677887764 478999999999999999999999999999977899999999999999999988877533 4555
Q ss_pred HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC----CCcH
Q 018075 239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY----RSTW 312 (361)
Q Consensus 239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~ 312 (361)
+.+.++. .+.++|++||++|++..++.+++.++++|+++.+|..... .+++...++.++.++.+++.. .+++
T Consensus 235 ~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 312 (358)
T TIGR03451 235 EAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF 312 (358)
T ss_pred HHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence 5554443 3568999999999877899999999999999999976432 234444677788999887542 4678
Q ss_pred HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 313 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+++++++++|++++.+.++++|+| +++++|++.+++++.. |+++.
T Consensus 313 ~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 313 PMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEe
Confidence 899999999999877788999999 9999999999988665 77765
No 11
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=6e-49 Score=360.99 Aligned_cols=336 Identities=36% Similarity=0.632 Sum_probs=278.3
Q ss_pred ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCc-ccCcceeEEEEEeCCCCCCC
Q 018075 15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM-VIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 15 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~ 92 (361)
|++++++.+. ..++++.+.|.+.+++|+|||.++|||.+|++.+.+.... ...|. ++|||++|+|+++| .++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence 5677788665 4448888778789999999999999999999998875322 23344 99999999999999 77889
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCC----CCCceeEEEEecCCceEEC-CCCCCcccccccchhHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP----TNGSLAHKVVHPAKLCYKL-PDNVSLEEGAMCEPLSVG 167 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~v-P~~~~~~~aa~~~~~~~a 167 (361)
++||||++.|..+||+|.+|+.|.++.|++..+++... .+|+|+||++++.++++++ |+++++++|++.++++++
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~ 156 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA 156 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence 99999999999999999999999999999776555322 5799999999997655555 777777888888999999
Q ss_pred HHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHH
Q 018075 168 VHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 168 ~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+++. .....+++++|+|+|+|++|++++++++..|+..|++++.+++|++++++ .+++.+.+... .+....+.++
T Consensus 157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~~~~~~~~~- 233 (350)
T COG1063 157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DDAGAEILEL- 233 (350)
T ss_pred hhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--ccHHHHHHHH-
Confidence 8874 44556666699999999999999999999999999999999999999999 55655544221 1333333333
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeec-C-CCcHHHHHHHHHcC
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFR-Y-RSTWPLCIEFLRSG 322 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~l~~g 322 (361)
+.+.++|++|||+|.+..+..+++.++++|+++.+|...... .++...++.+++++.|+.. . ...++.+++++++|
T Consensus 234 -t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g 312 (350)
T COG1063 234 -TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASG 312 (350)
T ss_pred -hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcC
Confidence 346689999999999988999999999999999999887654 4667788999999999965 3 57899999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEe
Q 018075 323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 360 (361)
Q Consensus 323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~ 360 (361)
++++.+.+++.+++ +++++|++.+.+.+. ..|++++
T Consensus 313 ~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~ 349 (350)
T COG1063 313 KIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLK 349 (350)
T ss_pred CCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEec
Confidence 99999999999888 999999999998644 5688875
No 12
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.1e-48 Score=362.05 Aligned_cols=337 Identities=28% Similarity=0.435 Sum_probs=276.3
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
++++++..+ +.++++++|.|+|.++||+|||.++|+|++|++...|.... ...|.++|||++|+|+++|+++++|+
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence 456666654 57999999999999999999999999999999988765321 35689999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCceeEEEEecCCceEECCCCC
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKLPDNV 153 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~~~~~~vP~~~ 153 (361)
+||||++.+..+|+.|.+|+.|++++|+++... +. ....|+|+||++++++.++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 999999988889999999999999999975321 10 0024799999999999999999999
Q ss_pred Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075 154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231 (361)
Q Consensus 154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 231 (361)
++++|+.+. ++.+||+++. .+++++|++|||+|+|++|++++|+||.+|+.+|++++.++++.++++++|++.++++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~ 238 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN 238 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence 999998664 7888999874 58899999999999999999999999999997789999999999999999999888754
Q ss_pred CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCC--cceechHhhhcCcEEEEeecC
Q 018075 232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY 308 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~ 308 (361)
+...++.+.+.++. +.++|++||++|++..+..++++++++ |+++.+|..... ..+....+. ....+.++...
T Consensus 239 ~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~ 314 (368)
T TIGR02818 239 DYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFG 314 (368)
T ss_pred ccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeecc
Confidence 32334445555443 348999999999877899999999886 999999975422 222222222 23456665432
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..++.++++++++|++++++.++++|+| +++++|++.+++++. .|++++|
T Consensus 315 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 315 GVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCCc-eeEEeeC
Confidence 4578899999999999888889999999 999999999988754 7999875
No 13
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.8e-49 Score=334.46 Aligned_cols=339 Identities=27% Similarity=0.429 Sum_probs=291.4
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+.++|+.-++ ++|.++|+.+++|+.+||+||+.++++|++|...++|... ...+|.|+|||.+|+|+.+|++|+.+
T Consensus 7 ~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~---~~~fP~IlGHEaaGIVESvGegV~~v 83 (375)
T KOG0022|consen 7 TCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP---EGLFPVILGHEAAGIVESVGEGVTTV 83 (375)
T ss_pred EEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc---cccCceEecccceeEEEEecCCcccc
Confidence 4578888877 7899999999999999999999999999999999988642 24789999999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC---------------------CCCCCceeEEEEecCCceEECCC
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS---------------------PPTNGSLAHKVVHPAKLCYKLPD 151 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~~~~~~~~~~~vP~ 151 (361)
++||+|+......|++|.+|.++..++|..+..... .....+|+||.+++...+.++++
T Consensus 84 k~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~ 163 (375)
T KOG0022|consen 84 KPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDP 163 (375)
T ss_pred CCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCC
Confidence 999999999999999999999999999987544431 01234899999999999999999
Q ss_pred CCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075 152 NVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK 229 (361)
Q Consensus 152 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 229 (361)
..+++.++++. ..+|+|.+. +.++++||+++.|+|-|++|+++++-||+.||.++|++|-+++|.+.+++||+++.++
T Consensus 164 ~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN 243 (375)
T KOG0022|consen 164 SAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN 243 (375)
T ss_pred CCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence 99999999885 678888775 6699999999999999999999999999999999999999999999999999999887
Q ss_pred cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechHh-hhcCcEEEEee-
Q 018075 230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVDVIGIF- 306 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~- 306 (361)
.........+.+.++ .+.|+|+.|||.|....+++++.+...| |+-+.+|.......+...++ .+.+.++.|+.
T Consensus 244 p~d~~~~i~evi~Em---TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~F 320 (375)
T KOG0022|consen 244 PKDLKKPIQEVIIEM---TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAF 320 (375)
T ss_pred hhhccccHHHHHHHH---hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEec
Confidence 542222355555555 4689999999999999999999999999 99999997776556655553 33455555443
Q ss_pred ---cCCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 307 ---RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 307 ---~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..+.++..+.+.+.++++.++..++++++| +++++|++.|.+|+.. |.|+.+
T Consensus 321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred ccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence 237899999999999999999999999999 9999999999999775 777653
No 14
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=8.8e-49 Score=355.22 Aligned_cols=308 Identities=30% Similarity=0.433 Sum_probs=256.7
Q ss_pred eEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
++.++. +++.++++|+|.|+|+++||||||+++|+|+.|.+..+|.. ....+.|+++|.|++|+|+++|++|++|
T Consensus 2 ka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~--~~~~~~P~i~G~d~aG~V~avG~~V~~~ 79 (326)
T COG0604 2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA--PPVRPLPFIPGSEAAGVVVAVGSGVTGF 79 (326)
T ss_pred eEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCC--CCCCCCCCcccceeEEEEEEeCCCCCCc
Confidence 455555 34569999999999999999999999999999999998751 2224689999999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l 171 (361)
++||||+..+ . ....|+|+||+.++++.++++|+++++++||+++ .+.|||+++
T Consensus 80 ~~GdrV~~~~-~------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l 134 (326)
T COG0604 80 KVGDRVAALG-G------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLAL 134 (326)
T ss_pred CCCCEEEEcc-C------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999742 0 0037999999999999999999999999999775 789999999
Q ss_pred Hh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 RR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
.. .++++|++|||+| +|++|.+++||||.+|+ .++++.+++++.++++++|++++++|.. +++.+.++++. .+
T Consensus 135 ~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t--~g 209 (326)
T COG0604 135 FDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELT--GG 209 (326)
T ss_pred HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHc--CC
Confidence 76 8899999999998 79999999999999998 4566667777777999999999998755 46888887775 35
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeecC-C------CcHHHHHHHHH
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY-R------STWPLCIEFLR 320 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~-~------~~~~~~~~~l~ 320 (361)
.++|+|||++|++ .+..++++|+++|+++.+|..++ ...++...+..+.+...+.... . +.+++++++++
T Consensus 210 ~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~ 288 (326)
T COG0604 210 KGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLA 288 (326)
T ss_pred CCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHH
Confidence 6899999999977 89999999999999999997663 3334455677788888887765 2 46778999999
Q ss_pred cCCCCCCCceEEEecCChhhHHHHHH--HHhcCCCceEEEEeC
Q 018075 321 SGKIDVKPLITHRFGFTQKEIEDAFE--ISAQGGNAIKVMFNL 361 (361)
Q Consensus 321 ~g~~~~~~~~~~~~~l~~~~~~~a~~--~l~~~~~~gkvvi~~ 361 (361)
+|.+ ++.+.++|+| ++...+.. .++ ++..||+|+++
T Consensus 289 ~g~l--~~~i~~~~~l--~e~~~a~a~~~~~-~~~~GKvvl~~ 326 (326)
T COG0604 289 SGKL--KPVIDRVYPL--AEAPAAAAHLLLE-RRTTGKVVLKV 326 (326)
T ss_pred cCCC--cceeccEech--hhhHHHHHHHHcc-cCCcceEEEeC
Confidence 9999 7778889999 88544444 444 58899999974
No 15
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.7e-48 Score=362.66 Aligned_cols=336 Identities=24% Similarity=0.432 Sum_probs=268.1
Q ss_pred ceEEEEeeCCceEEEEecCCCCC-------CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLG-------PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS 87 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~-------~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 87 (361)
|+++++.+++.++++++|.|+|+ +|||||||.++|||++|++.+.|.. ....|.++|||++|+|+++|+
T Consensus 3 mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~ 78 (393)
T TIGR02819 3 NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEVIEKGR 78 (393)
T ss_pred ceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEEEEEcC
Confidence 56777778889999999999874 6899999999999999999887642 235689999999999999999
Q ss_pred CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcc------ccCCC---CCCCceeEEEEecCC--ceEECCCCCCc-
Q 018075 88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------FFGSP---PTNGSLAHKVVHPAK--LCYKLPDNVSL- 155 (361)
Q Consensus 88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~~~~~--~~~~vP~~~~~- 155 (361)
+|++|++||||++.+...|+.|.+|+.|++++|++.. +++.. ...|+|+||+++++. .++++|++++.
T Consensus 79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~ 158 (393)
T TIGR02819 79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL 158 (393)
T ss_pred ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence 9999999999999988999999999999999999753 12211 247999999999964 69999998753
Q ss_pred ---cccc-ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075 156 ---EEGA-MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231 (361)
Q Consensus 156 ---~~aa-~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 231 (361)
..++ +..++.++|+++++.++++|++|||.|+|++|++++|+|+.+|++.+++++.+++|.++++++|++. +++.
T Consensus 159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~ 237 (393)
T TIGR02819 159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLS 237 (393)
T ss_pred ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecC
Confidence 2333 4467889999998888999999999999999999999999999977777778889999999999974 3322
Q ss_pred CCccchhHHHHHHHhhcCCCccEEEEccCCh--------------HHHHHHHHhhcCCCEEEEEccCC-CCc-c------
Q 018075 232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCLIGLAK-TEM-T------ 289 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~-~------ 289 (361)
...++.+.+.++. .+.++|++||++|.+ ..++.+++.++++|+++.+|... ... .
T Consensus 238 -~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~ 314 (393)
T TIGR02819 238 -KDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAK 314 (393)
T ss_pred -CcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccc
Confidence 2234545554443 356899999999975 37999999999999999999753 111 1
Q ss_pred -----eechHhhhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 290 -----VALTPAAAREVDVIGIFRYR-STWPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 290 -----~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.....+.++.++.+..... +.+.++++++++|++++.+.++ +.|+| +++++|++.+.+++ .+|+++++
T Consensus 315 ~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~Kvvi~~ 390 (393)
T TIGR02819 315 TGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKKFVIDP 390 (393)
T ss_pred ccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceEEEEeC
Confidence 11223345556666643332 2346899999999998777777 67999 99999999999874 48999863
No 16
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=7.6e-48 Score=356.21 Aligned_cols=335 Identities=28% Similarity=0.498 Sum_probs=282.6
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|+++++.+++.++++++|.|+| .++||+|||.++|+|++|++...+.. . ...|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~--~--~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG--A--HYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC--C--CCCCcccccceEEEEEEeCCCCCCCC
Confidence 3566777778899999999998 59999999999999999987532210 0 13588999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHh
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR 173 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~ 173 (361)
+||+|++.+..+|+.|.+|+.|.+..|+...+++. ...|+|+||+.++++.++++|+++++++|+.+.++++++++++.
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~ 155 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL 155 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence 99999999989999999999999999998766553 35799999999999999999999999999877677778888777
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
..+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .+ .+.+.++. .+.++|
T Consensus 156 ~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~--~~~~~d 230 (347)
T PRK10309 156 AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL--RELRFD 230 (347)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh--cCCCCC
Confidence 88899999999999999999999999999976888899999999999999988877543 22 22333332 346788
Q ss_pred -EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCccee---chHhhhcCcEEEEeecC------CCcHHHHHHHHHcCC
Q 018075 254 -VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA---LTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGK 323 (361)
Q Consensus 254 -~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~ 323 (361)
++|||+|++..+..+++.|+++|+++.+|......+++ ...+..+++++.|++.+ .++++++++++++|.
T Consensus 231 ~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~ 310 (347)
T PRK10309 231 QLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERK 310 (347)
T ss_pred eEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCC
Confidence 99999998778999999999999999999655432222 23567788999987653 357889999999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.+++.++++|+| +++++|++.+.+++..||+|+++
T Consensus 311 i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 311 LSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred CCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 9888899999999 99999999999998889999874
No 17
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7.5e-48 Score=359.03 Aligned_cols=337 Identities=25% Similarity=0.412 Sum_probs=279.5
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++++.++ +.++++++|.|+|+++||+|||.++|+|++|++.+.|... ...+|+++|||++|+|+++|+++++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence 5677777754 6799999999999999999999999999999998876532 23568999999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC------------------CCCCCceeEEEEecCCceEECCC
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS------------------PPTNGSLAHKVVHPAKLCYKLPD 151 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~g~~~~~~~~~~~~~~~vP~ 151 (361)
++||||++.+..+|++|.+|+.|++..|++..+. +. ....|+|+||+++++..++++|+
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 9999999988899999999999999999986432 00 00348899999999999999999
Q ss_pred CCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075 152 NVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK 229 (361)
Q Consensus 152 ~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~ 229 (361)
++++++|+++. .+.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999988664 6778888764 488999999999999999999999999999966899999999999999999988876
Q ss_pred cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechH-hhhcCcEEEEeec
Q 018075 230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-AAAREVDVIGIFR 307 (361)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~ 307 (361)
+.....++.+.++++. +.++|++||++|.+..+..++++++++ |+++.+|.......+.... ...+++++.|++.
T Consensus 239 ~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 315 (369)
T cd08301 239 PKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLF 315 (369)
T ss_pred ccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEec
Confidence 5432234545555443 348999999999877889999999996 9999999765322222222 2346889988765
Q ss_pred C----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 308 Y----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 308 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
. +.+++++++++.+|.+++.+.++++|+| +++++|++.+.+++.. |+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCce-eEEe
Confidence 3 3478899999999999877788899999 9999999999999764 8776
No 18
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.1e-47 Score=357.60 Aligned_cols=337 Identities=28% Similarity=0.448 Sum_probs=276.0
Q ss_pred cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++++..+ ++++++++|.|+|+++||+|||.++|+|++|++...|.... ..+|+++|||++|+|+++|+++++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence 4566666644 67999999999999999999999999999999988765321 3578999999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCceeEEEEecCCceEECCCC
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKLPDN 152 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~~~~~~vP~~ 152 (361)
++||+|++.+..+|++|.+|+.|+++.|+++... +. ....|+|+||+.++++.++++|++
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 158 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE 158 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence 9999999988889999999999999999875321 00 012479999999999999999999
Q ss_pred CCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075 153 VSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 230 (361)
Q Consensus 153 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~ 230 (361)
+++++|+.+. ++.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+..|++++.++++.++++++|++.++++
T Consensus 159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~ 238 (368)
T cd08300 159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP 238 (368)
T ss_pred CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence 9999988665 7788998874 4889999999999999999999999999999778999999999999999999988876
Q ss_pred CCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCccee--chHhhhcCcEEEEeec
Q 018075 231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVA--LTPAAAREVDVIGIFR 307 (361)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~--~~~~~~~~~~i~~~~~ 307 (361)
.+.++++.+.+.++. ++++|+|||++|++..++.++++++++ |+++.+|.......+. ...+. ....+.++..
T Consensus 239 ~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 314 (368)
T cd08300 239 KDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAF 314 (368)
T ss_pred cccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEe
Confidence 442224555555543 348999999999877899999999886 9999999653211222 22222 3345555443
Q ss_pred C----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 308 Y----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 308 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
. .+++.++++++++|++++.+.++++|+| +++++|++.+.+++. .|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence 2 5678899999999999877889999999 999999999988854 688875
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.3e-47 Score=355.41 Aligned_cols=333 Identities=23% Similarity=0.329 Sum_probs=270.4
Q ss_pred CcccceEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075 11 DKNQNMAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV 89 (361)
Q Consensus 11 ~~~~~~~~~~~~-~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (361)
-|+...+++..+ ++.+++.+++.|.|+++||+|||.++|+|++|++.+.|... ....|.++|||++|+|+++|++|
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~vG~~v 85 (360)
T PLN02586 9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTKLGKNV 85 (360)
T ss_pred chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEEECCCC
Confidence 344555555554 46799999999999999999999999999999998876431 13568999999999999999999
Q ss_pred CCCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccccc
Q 018075 90 KSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE 162 (361)
Q Consensus 90 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~ 162 (361)
++|++||+|++.+. .+|+.|.+|+.|.+++|++..+.. +....|+|+||++++++.++++|+++++++|+.+.
T Consensus 86 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~ 165 (360)
T PLN02586 86 KKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLL 165 (360)
T ss_pred CccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhh
Confidence 99999999986544 479999999999999999865431 12236999999999999999999999999988664
Q ss_pred -hhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHHcCCCEEeecCCCccchhH
Q 018075 163 -PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVSTDIEDVDT 239 (361)
Q Consensus 163 -~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~ 239 (361)
.+.++|++++. ..+++|++|||.|+|++|++++|+||.+|++ +++++.+++ +.++++++|++.++++.. . +
T Consensus 166 ~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~--~---~ 239 (360)
T PLN02586 166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTD--P---E 239 (360)
T ss_pred cchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCC--H---H
Confidence 56778888865 5578999999999999999999999999995 566655554 456778999988876432 1 2
Q ss_pred HHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHH
Q 018075 240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEF 318 (361)
Q Consensus 240 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~ 318 (361)
.+++. .+ ++|++||++|.+..++.++++++++|+++.+|.......++...++.++..+.++..+ ..++++++++
T Consensus 240 ~~~~~---~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l 315 (360)
T PLN02586 240 KMKAA---IG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDF 315 (360)
T ss_pred HHHhh---cC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHH
Confidence 23332 22 6999999999876899999999999999999976544455666677788888887654 4578999999
Q ss_pred HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+++|+++ +.+ ++|+| +++++|++.+.+++..||+|+++
T Consensus 316 i~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 316 CAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999994 444 57888 99999999999998889999864
No 20
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=4e-47 Score=352.04 Aligned_cols=340 Identities=38% Similarity=0.663 Sum_probs=289.1
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccc-cc-------ccCCCCcccCcceeEEEEEeC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRC-AN-------FIVKKPMVIGHECAGIIEEVG 86 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~-------~~~~~p~~~G~e~~G~V~~vG 86 (361)
|++.++.+++.++++++|.|+|.++||+||+.++++|++|++...+... .. .....|+++|+|++|+|+++|
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 80 (351)
T cd08233 1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80 (351)
T ss_pred CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence 3566666788999999999999999999999999999999876543210 00 002368899999999999999
Q ss_pred CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHH
Q 018075 87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV 166 (361)
Q Consensus 87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~ 166 (361)
++++++++||+|++.+...|+.|.+|+.|++.+|+++.+.+....+|+|++|+.++.+.++++|+++++++|+.+.++.+
T Consensus 81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t 160 (351)
T cd08233 81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV 160 (351)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence 99999999999999888899999999999999999877654322379999999999999999999999999887778889
Q ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075 167 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 167 a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
||+++...++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .++.+.+.+..
T Consensus 161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~- 237 (351)
T cd08233 161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT- 237 (351)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence 999997788999999999999999999999999999977888889999999999999998877543 45655555443
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCC
Q 018075 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID 325 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~ 325 (361)
.++++|++||++|....++.++++|+++|+++.+|......+++...+..+++++.+...+ .++++++++++++|+++
T Consensus 238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~ 316 (351)
T cd08233 238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKID 316 (351)
T ss_pred -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCC
Confidence 3457999999999776899999999999999999976554455666778899999998766 68899999999999997
Q ss_pred CCCceEEEecCChhhH-HHHHHHHhcCCCc-eEEEEe
Q 018075 326 VKPLITHRFGFTQKEI-EDAFEISAQGGNA-IKVMFN 360 (361)
Q Consensus 326 ~~~~~~~~~~l~~~~~-~~a~~~l~~~~~~-gkvvi~ 360 (361)
+.+.++++|++ +++ ++|++.+.+++.. +|+||.
T Consensus 317 ~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 317 AEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred hHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence 77778889999 996 7999999999874 999873
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.6e-47 Score=354.37 Aligned_cols=321 Identities=22% Similarity=0.343 Sum_probs=266.1
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075 23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP 102 (361)
Q Consensus 23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 102 (361)
++.+.+.+++.|.|+++||+|||.++|+|++|++...|... ....|.++|||++|+|+++|+++++|++||||++.+
T Consensus 16 ~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~ 92 (375)
T PLN02178 16 SGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92 (375)
T ss_pred CCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcC
Confidence 46799999999999999999999999999999998876431 124689999999999999999999999999998765
Q ss_pred Cc-CCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhc
Q 018075 103 GI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRA 174 (361)
Q Consensus 103 ~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~~ 174 (361)
.. .|+.|.+|+.|++++|++..+.. +....|+|+||+.++++.++++|+++++++|+++. .+.++|+++...
T Consensus 93 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~ 172 (375)
T PLN02178 93 IIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYY 172 (375)
T ss_pred ccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHh
Confidence 54 69999999999999999865421 11236999999999999999999999999988664 567788888654
Q ss_pred C--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075 175 N--VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 175 ~--~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
. .++|++|+|.|+|++|++++|+||.+|+ .+++++.++ ++.++++++|++.++++.. . +.+.+. .+ +
T Consensus 173 ~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~---~~-~ 242 (375)
T PLN02178 173 GMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEA---VG-T 242 (375)
T ss_pred CCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHh---hC-C
Confidence 3 4689999999999999999999999999 467776654 4578889999998876432 1 233332 23 6
Q ss_pred ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI 330 (361)
Q Consensus 252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 330 (361)
+|++||++|.+..++.++++++++|+++.+|.......++...+.+++.++.|+... .+++.++++++++|+++ +.+
T Consensus 243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~--~~i 320 (375)
T PLN02178 243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIV--SDI 320 (375)
T ss_pred CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCc--ccE
Confidence 999999999876789999999999999999976544456666778899999998765 46789999999999994 445
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.|+| +++++|++.+.+++..||+|+++
T Consensus 321 -~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 321 -ELIKM--SDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred -EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence 56888 99999999999998889999864
No 22
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=7.7e-47 Score=351.48 Aligned_cols=335 Identities=28% Similarity=0.459 Sum_probs=279.0
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
++++++.+. +.++++++|.|.++++||+|||.++|+|++|++...|... ..+|+++|||++|+|+++|+++++++
T Consensus 3 ~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 3 CKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred cEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccCC
Confidence 466667654 5699999999999999999999999999999998876432 35689999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-------------------CCCCCceeEEEEecCCceEECCCCCC
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-------------------PPTNGSLAHKVVHPAKLCYKLPDNVS 154 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~~~~~~~~~vP~~~~ 154 (361)
+||+|++.+..+|++|.+|..|.+.+|++..+... ....|+|+||++++.+.++++|++++
T Consensus 79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 99999998888999999999999999998653311 01258999999999999999999999
Q ss_pred cccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075 155 LEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232 (361)
Q Consensus 155 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 232 (361)
+++|+.+. ++.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.+++...
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~ 238 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD 238 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence 99998665 788899886 4588999999999999999999999999999977899999999999999999988876543
Q ss_pred CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCC-CcceechHhhhcCcEEEEeecC--
Q 018075 233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-- 308 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-- 308 (361)
...++.+.++++. +.++|++||++|....+..++++++++ |+++.+|...+ ..++....+.. +.++.+++.+
T Consensus 239 ~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 314 (365)
T cd08277 239 SDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGF 314 (365)
T ss_pred ccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCC
Confidence 2233444554443 368999999999877889999999885 99999997543 22334444443 7888887654
Q ss_pred --CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 309 --RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 309 --~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
..++++++++++++.++..+.++++|+| +++++|++.+++++ ..|++++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 315 KSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred ChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence 3468899999999998878889999999 99999999999886 4688874
No 23
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.3e-46 Score=348.46 Aligned_cols=353 Identities=78% Similarity=1.330 Sum_probs=297.8
Q ss_pred cCCcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075 9 EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE 88 (361)
Q Consensus 9 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 88 (361)
+...++++++|+.+++.+++++.+.|++.++||+|||.++++|++|++...+...+......|.++|+|++|+|+++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 91 (364)
T PLN02702 12 SGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSE 91 (364)
T ss_pred cccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCC
Confidence 35668899999999999999999999999999999999999999999887653322222346789999999999999999
Q ss_pred CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHH
Q 018075 89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV 168 (361)
Q Consensus 89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~ 168 (361)
+++|++||+|++.+...|+.|..|+.|....|+...+++.....|+|++|+.++.+.++++|+++++++|++..++++++
T Consensus 92 v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~ 171 (364)
T PLN02702 92 VKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGV 171 (364)
T ss_pred CCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHHHHHH
Confidence 99999999999998899999999999999999986655544457999999999999999999999999988656777788
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
++++..++++|++|||+|+|++|++++++|+..|+..+++++.++++.++++++|++..+++.....++.+.+.++....
T Consensus 172 ~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (364)
T PLN02702 172 HACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAM 251 (364)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhc
Confidence 88866889999999999999999999999999999778889899999999999999988776544445655555443333
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCC
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP 328 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~ 328 (361)
+.++|++||++|+...+..++++|+++|+++.+|.......+.......+++++.+++.....++.++++++++.+.+.+
T Consensus 252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~ 331 (364)
T PLN02702 252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKP 331 (364)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchH
Confidence 56899999999976689999999999999999986543333445567788999999876667888999999999986556
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.+.+.|+++++++++|++.+.+++..+|+++.+
T Consensus 332 ~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~ 364 (364)
T PLN02702 332 LITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364 (364)
T ss_pred heEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence 677887776689999999999988889999863
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=7.5e-47 Score=349.58 Aligned_cols=333 Identities=23% Similarity=0.436 Sum_probs=278.3
Q ss_pred EEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 018075 19 WLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97 (361)
Q Consensus 19 ~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 97 (361)
++.+++. ++++++|.|.++++||+|||.++|+|++|++...+... ....+|+++|||++|+|+++|++++.+ +||+
T Consensus 3 ~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gdr 79 (349)
T TIGR03201 3 MMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-IGKA 79 (349)
T ss_pred eEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-CCCE
Confidence 4555654 89999999999999999999999999999987643211 113568999999999999999999877 9999
Q ss_pred EEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCC------CCCccccccc-chhHHHHHH
Q 018075 98 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD------NVSLEEGAMC-EPLSVGVHA 170 (361)
Q Consensus 98 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~------~~~~~~aa~~-~~~~~a~~~ 170 (361)
|++.+..+|++|.+|+.|++++|+...+.+. ...|+|+||+.++.+.++++|+ ++++++++.+ .++.++|++
T Consensus 80 V~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a 158 (349)
T TIGR03201 80 VIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA 158 (349)
T ss_pred EEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence 9999999999999999999999998766543 2469999999999999999999 8888887755 578899999
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCc-cchhHHHHHHHhhcC
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI-EDVDTDVGKIQNAMG 249 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~ 249 (361)
++..++++|++|+|+|+|++|++++|+|+.+|+ .+++++.++++.++++++|++.++++.... .++.+.++++. .+
T Consensus 159 ~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t--~~ 235 (349)
T TIGR03201 159 AVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA--KA 235 (349)
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc--cc
Confidence 888889999999999999999999999999999 588899999999999999998877653321 23444444432 34
Q ss_pred CCcc----EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCC
Q 018075 250 SGID----VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI 324 (361)
Q Consensus 250 ~~~d----~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~ 324 (361)
.++| ++|||+|+...++.++++|+++|+++.+|.......+....++.++.++.+.+.. .++++++++++++|++
T Consensus 236 ~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i 315 (349)
T TIGR03201 236 RGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKI 315 (349)
T ss_pred CCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCC
Confidence 6776 8999999887888899999999999999976554455556677778888888764 5679999999999999
Q ss_pred CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 325 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 325 ~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++.+.++ .|+| +++++|++.+.+++..+|++++.
T Consensus 316 ~~~~~i~-~~~l--~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 316 QLGPFVE-RRPL--DQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred CcccceE-EecH--HHHHHHHHHHHcCCccceEEecC
Confidence 7766664 6888 99999999999998899999863
No 25
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=8.7e-47 Score=350.05 Aligned_cols=330 Identities=25% Similarity=0.363 Sum_probs=264.6
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
+++++..+ ..++++++|.|+|+++||||||+++|+|++|++.++|..........|.++|||++|+|+++|++ +.|++
T Consensus 2 ka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~v 80 (355)
T cd08230 2 KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSP 80 (355)
T ss_pred ceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCC
Confidence 44555533 23999999999999999999999999999999998875321111245889999999999999999 99999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR 172 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~ 172 (361)
||||+..+...|+.|.+|..|++.+|++..++ +.....|+|+||++++++.++++|++++ +.+++..++++++.++.
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~~ 159 (355)
T cd08230 81 GDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIE 159 (355)
T ss_pred CCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHHH
Confidence 99999988889999999999999999976543 2223479999999999999999999999 66666667766555442
Q ss_pred h-------cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC---ChhHHHHHHHcCCCEEeecCCCccchhHHHH
Q 018075 173 R-------ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV---DVQRLSIARNLGADETAKVSTDIEDVDTDVG 242 (361)
Q Consensus 173 ~-------~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~---~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 242 (361)
. .++++|++|||+|+|++|++++|+||.+|+ .++++++ +++|.++++++|++.+ ++.. +++.+ .
T Consensus 160 ~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~--~~~~~-~- 233 (355)
T cd08230 160 QAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATYV-NSSK--TPVAE-V- 233 (355)
T ss_pred HHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEe-cCCc--cchhh-h-
Confidence 2 336799999999999999999999999999 5788876 6889999999999863 4322 23322 1
Q ss_pred HHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--Cccee----chHhhhcCcEEEEeecC-CCcHHHH
Q 018075 243 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVA----LTPAAAREVDVIGIFRY-RSTWPLC 315 (361)
Q Consensus 243 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~~-~~~~~~~ 315 (361)
. ...++|+|||++|++..+..+++.|+++|+++.+|.... ..+++ ...++++++++.|+... .++++++
T Consensus 234 --~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~ 309 (355)
T cd08230 234 --K--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQA 309 (355)
T ss_pred --h--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHH
Confidence 1 135899999999987788999999999999999997654 22333 34577899999998765 5688999
Q ss_pred HHHHHcCCC----CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 316 IEFLRSGKI----DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 316 ~~~l~~g~~----~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++++.++.+ ..++.++++|+| +++++|++.++++. +|+|+++
T Consensus 310 ~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 310 VEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence 999998872 246778899999 99999999987654 5999874
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.3e-46 Score=344.66 Aligned_cols=312 Identities=24% Similarity=0.335 Sum_probs=268.1
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
..++++++|.|+|+++||+|||.++|+|++|++...|.... ..+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 89 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL 89 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence 46899999999999999999999999999999988775321 234789999999999999999999999999987654
Q ss_pred -cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHhcCCCCCCE
Q 018075 104 -ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETN 181 (361)
Q Consensus 104 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~ 181 (361)
..|+.|.+|+.|++++|+++.+++. ..+|+|+||+.++++.++++|+++++++++.+ .++.+||++++++++++|++
T Consensus 90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~ 168 (329)
T TIGR02822 90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR 168 (329)
T ss_pred cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence 4799999999999999999877653 35799999999999999999999999988854 57888999998788999999
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261 (361)
Q Consensus 182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 261 (361)
|||+|+|++|++++|+|+.+|+ .+++++++++|.++++++|++.+++... . ...++|+++++.+.
T Consensus 169 VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~--~------------~~~~~d~~i~~~~~ 233 (329)
T TIGR02822 169 LGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD--T------------PPEPLDAAILFAPA 233 (329)
T ss_pred EEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc--c------------CcccceEEEECCCc
Confidence 9999999999999999999999 5888899999999999999998776321 0 02468999998887
Q ss_pred hHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChh
Q 018075 262 DKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQK 339 (361)
Q Consensus 262 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~ 339 (361)
...++.++++|+++|+++.+|.... ...+....+..++.++.++... ..++.++++++++|+++ .++++|+| +
T Consensus 234 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~~l--~ 308 (329)
T TIGR02822 234 GGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTYPL--S 308 (329)
T ss_pred HHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEEeH--H
Confidence 7799999999999999999997433 2234455667788999988765 45788899999999983 35788999 9
Q ss_pred hHHHHHHHHhcCCCceEEEE
Q 018075 340 EIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 340 ~~~~a~~~l~~~~~~gkvvi 359 (361)
++++|++.+.+++..||+|+
T Consensus 309 ~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 309 EADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHcCCCceEEEe
Confidence 99999999999999999987
No 27
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.5e-47 Score=316.23 Aligned_cols=308 Identities=27% Similarity=0.353 Sum_probs=265.1
Q ss_pred cccceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075 12 KNQNMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE 88 (361)
Q Consensus 12 ~~~~~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 88 (361)
|+..+-.+++ +++.+++++.|+|+|.|+|+.||..|+|+|+.|..+.+|.+. +.+.|++||.|.+|+|+++|++
T Consensus 6 p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG~g 82 (336)
T KOG1197|consen 6 PPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVGEG 82 (336)
T ss_pred CchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEecCC
Confidence 4566666666 458899999999999999999999999999999998887542 4688999999999999999999
Q ss_pred CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHH
Q 018075 89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVG 167 (361)
Q Consensus 89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a 167 (361)
|+++++||||... ...|.|+|++.+|...++++|+.+++.+||++ ....||
T Consensus 83 vtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTA 134 (336)
T KOG1197|consen 83 VTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTA 134 (336)
T ss_pred ccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHH
Confidence 9999999999863 35899999999999999999999999999844 588999
Q ss_pred HHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075 168 VHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 168 ~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
|..+++ .++++|++|||+. +|++|++++|++++.|+ ++|++.+..+|++.+++.|+.+.|+++. +|+.+.+.+++
T Consensus 135 y~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~kiT 211 (336)
T KOG1197|consen 135 YMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVKKIT 211 (336)
T ss_pred HHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHHhcc
Confidence 998887 8999999999996 79999999999999999 6888889999999999999999999755 78888888776
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEe-----ecCCC----cHHHH
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGI-----FRYRS----TWPLC 315 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~-----~~~~~----~~~~~ 315 (361)
.+.|+|+++|++|.+ ++..++.+|++.|++|.+|..++. .+++++.+..+.+.+.-. ...+. -..++
T Consensus 212 --ngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl 288 (336)
T KOG1197|consen 212 --NGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARL 288 (336)
T ss_pred --CCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHH
Confidence 488999999999977 999999999999999999977653 345555555555444322 22222 24567
Q ss_pred HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 316 ~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+.++.+|.+ ++.+.+.|+| +++.+|+.++++++..||+++-
T Consensus 289 ~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 289 FALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred HHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence 888889999 7888999999 9999999999999999999874
No 28
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.8e-46 Score=344.32 Aligned_cols=325 Identities=23% Similarity=0.328 Sum_probs=257.5
Q ss_pred cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccc-cCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF-IVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 14 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
..+++++.+|+.++++++|.|+ +++||+|||+++|||++|++..+|...... ....|+++|||++|+|+++|.+ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~ 78 (341)
T cd08237 2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY 78 (341)
T ss_pred cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence 3567788899999999999995 999999999999999999999887532111 1357999999999999998875 69
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR 172 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~ 172 (361)
++||||+..+...|+ |+.| +..++|+...+++. ...|+|+||++++++.++++|+++++++|+++.++++|+++++
T Consensus 79 ~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~ 154 (341)
T cd08237 79 KVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAIS 154 (341)
T ss_pred CCCCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHH
Confidence 999999998777776 4444 45567887655542 2469999999999999999999999999888889999999885
Q ss_pred h---cCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 173 R---ANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 173 ~---~~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
. ..+++|++|||.|+|++|++++|+++. .|+.+|++++.+++|++++++.+++..++ + +. .
T Consensus 155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~--~ 219 (341)
T cd08237 155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IP--E 219 (341)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hh--h
Confidence 3 457899999999999999999999986 66657888999999999998766543211 1 11 1
Q ss_pred CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC--
Q 018075 249 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG-- 322 (361)
Q Consensus 249 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g-- 322 (361)
..++|+|||++|+ +..++.+++.|+++|+++.+|......+++...++.+++++.++... .++++++++++++|
T Consensus 220 ~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~ 299 (341)
T cd08237 220 DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPE 299 (341)
T ss_pred ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCc
Confidence 2369999999994 45789999999999999999976544455566678899999998765 56789999999999
Q ss_pred -CCCCCCceEEEecCC-hhhHHHHHHHHhcCCCceEEEEeC
Q 018075 323 -KIDVKPLITHRFGFT-QKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 323 -~~~~~~~~~~~~~l~-~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
...+++.++++|+|+ ++++.++++.+.++ ..||+|+++
T Consensus 300 ~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 300 VAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred ccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 334578888989871 23455555555544 678999863
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.2e-45 Score=337.42 Aligned_cols=329 Identities=23% Similarity=0.332 Sum_probs=269.3
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
+.+++..++ +.+.+++++.|+++++||+|||.++|+|++|++.+.|... ....|.++|||++|+|+++|+++++|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLG---MSNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcC---cCCCCccCCceeeEEEEEECCCccccc
Confidence 566666666 6799999999999999999999999999999998876431 124688999999999999999999999
Q ss_pred CCCEEEecCCc-CCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCccccccc-chhH
Q 018075 94 VGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLS 165 (361)
Q Consensus 94 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~ 165 (361)
+||+|++.+.. .|++|.+|+.|++.+|++..+.. +....|+|+||+.++...++++|+++++++|+.+ ..+.
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 166 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV 166 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence 99999875543 69999999999999999863211 1124699999999999999999999999998855 4678
Q ss_pred HHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHH
Q 018075 166 VGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGK 243 (361)
Q Consensus 166 ~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~ 243 (361)
+||+++.. ...++|++++|+|+|++|++++|+||.+|++ +++++.++++. ..++++|++..++... . ..+.+
T Consensus 167 ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--~---~~~~~ 240 (357)
T PLN02514 167 TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD--A---AEMQE 240 (357)
T ss_pred HHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC--h---HHHHH
Confidence 89998866 5568999999999999999999999999995 66666666655 4556799987665321 1 22332
Q ss_pred HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC
Q 018075 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 322 (361)
Q Consensus 244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g 322 (361)
. ..++|++||++|....++.++++++++|+++.+|......++....+..++.++.+++.. ..+++++++++++|
T Consensus 241 ~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g 316 (357)
T PLN02514 241 A----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEK 316 (357)
T ss_pred h----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhC
Confidence 2 237999999999766889999999999999999976544455566678899999998766 45789999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++ ++.+ +.|+| +++.+|++.+.++...||+++++
T Consensus 317 ~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 317 GL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred CC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence 87 5555 57888 99999999999998889999864
No 30
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3e-44 Score=331.28 Aligned_cols=335 Identities=27% Similarity=0.523 Sum_probs=279.0
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
|+++++.+++.+++++++.|.|+++||+||+.++++|++|++...|.... .+.|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence 35677778899999999999999999999999999999999887664321 246899999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~ 174 (361)
||+|+..+...|+.|.+|..+++.+|+++.+++. ...|+|+||+.++.+.++++|+++++++++.+.++.+++.+++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~ 156 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT 156 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence 9999999988999999999999999998876543 246999999999999999999999998887666788888766678
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++++|++|||+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++.+ .++.+.+.. .+.++|
T Consensus 157 ~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~d 230 (339)
T PRK10083 157 GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKPT 230 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCCC
Confidence 89999999999999999999999996 69987888999999999999999988876532 344443321 134567
Q ss_pred EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEE
Q 018075 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHR 333 (361)
Q Consensus 254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 333 (361)
++||++|.+..+...+++|+++|+++.+|.......+....+..+++++.+.....+.++.+++++++|++.+...+.+.
T Consensus 231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 310 (339)
T PRK10083 231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHT 310 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeee
Confidence 99999997768999999999999999998654332333334455777777765556789999999999999654457788
Q ss_pred ecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 018075 334 FGFTQKEIEDAFEISAQG-GNAIKVMFNL 361 (361)
Q Consensus 334 ~~l~~~~~~~a~~~l~~~-~~~gkvvi~~ 361 (361)
|++ +++++|++.++++ ...+|+++++
T Consensus 311 ~~l--~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 311 FDF--QHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred ecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence 888 9999999999865 4578999863
No 31
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.1e-44 Score=329.00 Aligned_cols=306 Identities=20% Similarity=0.277 Sum_probs=247.5
Q ss_pred cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecC-cchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGIC-GSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 14 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~-~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++++.+++.+++++.|.|+|+++||+|||.++|+| .+|++...|..........|+++|||++|+|+++|+++ +|
T Consensus 1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~ 79 (308)
T TIGR01202 1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF 79 (308)
T ss_pred CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence 35677778889999999999999999999999999997 69998777653211112569999999999999999999 59
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR 172 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~ 172 (361)
++||||+..+ ..|..+.. ...|+|+||++++++.++++|++++++. +++.++.+||++++
T Consensus 80 ~vGdrV~~~~----~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~ 139 (308)
T TIGR01202 80 RPGDRVFVPG----SNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVA 139 (308)
T ss_pred CCCCEEEEeC----cccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHH
Confidence 9999998732 12221110 1259999999999999999999999764 55566789999997
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
+.. .+++++||+|+|++|++++|+||.+|++.|++++.++++++.+.++ .++++.. . .+.++
T Consensus 140 ~~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g~ 201 (308)
T TIGR01202 140 GAE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRDY 201 (308)
T ss_pred hcc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCCC
Confidence 643 4689999999999999999999999997777888888887766553 2232211 0 14579
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceE
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLIT 331 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~ 331 (361)
|+||||+|++..++.++++++++|+++.+|......+++...++.+++++.++..+ .++++++++++++|++++.+.++
T Consensus 202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it 281 (308)
T TIGR01202 202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLIT 281 (308)
T ss_pred CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccc
Confidence 99999999876789999999999999999976554556666778888999887765 57799999999999998888899
Q ss_pred EEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 332 HRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 332 ~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+.|+| +++++|++.+.++...+|++++
T Consensus 282 ~~~~l--~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 282 HQRPA--SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred eeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence 99999 9999999998877677999874
No 32
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=7.3e-44 Score=331.43 Aligned_cols=337 Identities=32% Similarity=0.555 Sum_probs=279.7
Q ss_pred eEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC---
Q 018075 16 MAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS--- 91 (361)
Q Consensus 16 ~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 91 (361)
+++++.+++ .+++++++.|.|+++||+|||.++++|++|+....|.... ...|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence 456667665 8999999999999999999999999999999988765321 356889999999999999999986
Q ss_pred ---CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC------CCCCceeEEEEecCC-ceEECCCCCCccccccc
Q 018075 92 ---LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMC 161 (361)
Q Consensus 92 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~-~~~~vP~~~~~~~aa~~ 161 (361)
|++||+|++.+..+|+.|..|+.++++.|+...+++.. ...|+|+||+.++++ .++++|+++++++|+++
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999999998889999999999999999987666531 246999999999996 79999999998888866
Q ss_pred -chhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCcc-chh
Q 018075 162 -EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE-DVD 238 (361)
Q Consensus 162 -~~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~ 238 (361)
.++.+||+++++ ...++|++|||+|+|++|++++++|+.+|+..++++++++++.++++++|++.++++..... ++.
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~ 238 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRR 238 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHH
Confidence 689999999977 44569999999999999999999999999966888888999999999999988776543211 111
Q ss_pred HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC-CCcHHHH
Q 018075 239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-RSTWPLC 315 (361)
Q Consensus 239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 315 (361)
..+.++ +.+.++|++||++|+...++..+++++++|+++.+|..... ..+....+..+++++.+++.+ .++++++
T Consensus 239 ~~i~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (361)
T cd08231 239 AIVRDI--TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRA 316 (361)
T ss_pred HHHHHH--hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHH
Confidence 233333 23568999999998766889999999999999999865432 233334568889999988765 6789999
Q ss_pred HHHHHcC--CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 316 IEFLRSG--KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 316 ~~~l~~g--~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++++.++ .+.+.+.+++.|++ +++++|++.++++. .+|+||+
T Consensus 317 ~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~ 360 (361)
T cd08231 317 VRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVID 360 (361)
T ss_pred HHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeC
Confidence 9999998 55567778889999 99999999998886 4899986
No 33
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1.4e-43 Score=334.07 Aligned_cols=329 Identities=22% Similarity=0.351 Sum_probs=262.1
Q ss_pred cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhh-cccccccc---cCCCCcccCcceeEEEEEeCCCC
Q 018075 14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KTMRCANF---IVKKPMVIGHECAGIIEEVGSEV 89 (361)
Q Consensus 14 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~-~g~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v 89 (361)
.++++++.+++.++++++|.|.++++||+|||.++|+|++|++.+ .|...... ....|+++|||++|+|+++|++|
T Consensus 2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v 81 (410)
T cd08238 2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW 81 (410)
T ss_pred CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence 467888888889999999999999999999999999999999875 34311110 02468899999999999999999
Q ss_pred C-CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC----ceEECCCCCCcccccccchh
Q 018075 90 K-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMCEPL 164 (361)
Q Consensus 90 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~vP~~~~~~~aa~~~~~ 164 (361)
+ +|++||||++.+...|+.|..|. + . + ...+|+|+||++++++ .++++|+++++++|+++.++
T Consensus 82 ~~~~~vGdrV~~~~~~~c~~~~~c~-~-------~---g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl 149 (410)
T cd08238 82 QGKYKPGQRFVIQPALILPDGPSCP-G-------Y---S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL 149 (410)
T ss_pred cCCCCCCCEEEEcCCcCCCCCCCCC-C-------c---c-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence 8 69999999998877787776552 1 1 1 1247999999999987 68999999999999876555
Q ss_pred HHH---HHHH---------HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCChhHHHHHHHc-------
Q 018075 165 SVG---VHAC---------RRANVGPETNVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARNL------- 222 (361)
Q Consensus 165 ~~a---~~~l---------~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~l------- 222 (361)
+++ +.++ ++.++++|++|+|+| +|++|++++|+|+.+| +..|++++.+++|++.++++
T Consensus 150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~ 229 (410)
T cd08238 150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS 229 (410)
T ss_pred HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence 443 2222 346789999999998 6999999999999975 45689999999999999997
Q ss_pred -CCC-EEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccC-CC--CcceechHhhh
Q 018075 223 -GAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-KT--EMTVALTPAAA 297 (361)
Q Consensus 223 -g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~~~~ 297 (361)
|++ .++++.. ..++.+.++++. .+.++|++||++|.+..++.++++++++|+++.++.. .. ..+++...++.
T Consensus 230 ~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~ 306 (410)
T cd08238 230 RGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY 306 (410)
T ss_pred cCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence 665 3444321 134555555443 3568999999998877999999999999988876432 22 23455667888
Q ss_pred cCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 298 REVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 298 ~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+++++.|+... ..+++++++++++|++++.+.++++|+| +++++|++.+. ++..||+|+.
T Consensus 307 ~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~ 367 (410)
T cd08238 307 NNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIY 367 (410)
T ss_pred cCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEE
Confidence 99999998765 5679999999999999888899999999 99999999999 7788999986
No 34
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=4.3e-43 Score=324.95 Aligned_cols=339 Identities=29% Similarity=0.554 Sum_probs=280.4
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccccc------ccCCCCcccCcceeEEEEEeCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCAN------FIVKKPMVIGHECAGIIEEVGSE 88 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~------~~~~~p~~~G~e~~G~V~~vG~~ 88 (361)
|+++++++++++++++++.|++.+++|+||+.++++|++|+....|..... ...+.|.++|+|++|+|+++|++
T Consensus 1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~ 80 (350)
T cd08256 1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG 80 (350)
T ss_pred CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence 367778888889999999999999999999999999999998877642100 00146789999999999999999
Q ss_pred CC--CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-CCCCCceeEEEEecCC-ceEECCCCCCcccccccchh
Q 018075 89 VK--SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-PPTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMCEPL 164 (361)
Q Consensus 89 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~vP~~~~~~~aa~~~~~ 164 (361)
++ +|++||+|++.+..+|+.|..|+.|...+|+...+++. ....|+|++|+.++++ .++++|+++++++|+.+.++
T Consensus 81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~ 160 (350)
T cd08256 81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL 160 (350)
T ss_pred cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence 98 89999999999999999999999999999987655443 1257999999999988 67899999999888866788
Q ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075 165 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 165 ~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 244 (361)
.++|++++..++++|++|||.|+|++|++++++|+.+|+..++++++++++.++++++|++.++++. ..++.+.+.++
T Consensus 161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~ 238 (350)
T cd08256 161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL 238 (350)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence 8999998778899999999977899999999999999997888899999999999999998876643 24555555443
Q ss_pred HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHh-hhcCcEEEEeecCCCcHHHHHHHHHcCC
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-AAREVDVIGIFRYRSTWPLCIEFLRSGK 323 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~g~ 323 (361)
. .+.++|++||++|+...+..++++++++|+++.+|.......+....+ ..+++++.++......+.++++++++|.
T Consensus 239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~ 316 (350)
T cd08256 239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGR 316 (350)
T ss_pred h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCC
Confidence 2 356799999999975578999999999999999986443333333332 3566777777666667899999999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
+++.+.+.+.|++ +++++|++.+++++..+|+++
T Consensus 317 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 317 LPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence 9654456788898 999999999999988889875
No 35
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.6e-43 Score=324.25 Aligned_cols=338 Identities=27% Similarity=0.369 Sum_probs=275.8
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
|+++++.+++.+++++++.|.+.++||+|||.++++|++|++...+.... ...|.++|||++|+|+++|++++++++
T Consensus 1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence 46777878888999999999999999999999999999999877654321 356889999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccc--cCCCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHH
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVH 169 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~ 169 (361)
||+|++.+..+|+.|..|..|++..|+.... ..+....|+|+||+.++.+ .++++|+++++++++.+ .++.+|++
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~ 157 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH 157 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence 9999998888999999999999999987521 1112347999999999974 89999999999998866 57888999
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+++..++++|++|||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.. .++.+.+.++. .+
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~ 233 (351)
T cd08285 158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--GG 233 (351)
T ss_pred HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--CC
Confidence 887788999999999999999999999999999977899999999999999999988877533 35555554443 35
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech--H--hhhcCcEEEEeecC--CCcHHHHHHHHHcCC
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--P--AAAREVDVIGIFRY--RSTWPLCIEFLRSGK 323 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~--~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~ 323 (361)
.++|++||++|++..+..++++|+++|+++.+|.......+... . ......++.+.... ++.++++++++++|+
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ 313 (351)
T cd08285 234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGR 313 (351)
T ss_pred CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCC
Confidence 68999999999877889999999999999999865532222221 1 22445566655432 578999999999999
Q ss_pred CCCCC-ceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 018075 324 IDVKP-LITHRFGFTQKEIEDAFEISAQGGN-AIKVMFNL 361 (361)
Q Consensus 324 ~~~~~-~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~~ 361 (361)
+.+.. ...+.+++ +++++|++.+.+++. ..|+++++
T Consensus 314 i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 314 VDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence 96533 34445788 999999999999864 78999875
No 36
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.5e-42 Score=323.23 Aligned_cols=337 Identities=26% Similarity=0.423 Sum_probs=273.8
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
++++|+..+ +.++++++|.|++.++||+|||.++|+|++|++...|.. ...+|+++|||++|+|+++|++++.++
T Consensus 8 ~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 8 CKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred eEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCccCC
Confidence 677777754 679999999999999999999999999999999887653 235688999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCceeEEEEecCCceEECCCCC
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDNV 153 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~vP~~~ 153 (361)
+||+|++.+..+||+|.+|+.+++..|+.....+. ....|+|+||++++.+.++++|+++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 99999998888999999999999999997654320 0035899999999999999999999
Q ss_pred Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075 154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231 (361)
Q Consensus 154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 231 (361)
++++++.+. ++.+||+++. .+++++|++|||+|+|++|++++++|+..|+..|+++++++++.+.++++|++.+++..
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~ 243 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ 243 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence 999988665 7888998864 58899999999999999999999999999996688888999999999999998877754
Q ss_pred CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhh-cCCCEEEEEccCCCCcceechH-hhhcCcEEEEeecC-
Q 018075 232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLIGLAKTEMTVALTP-AAAREVDVIGIFRY- 308 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~- 308 (361)
+...++.+.+.++. ++++|++||++|++..+..++..+ +++|+++.+|.......+.... .+.++.++.+++..
T Consensus 244 ~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 320 (373)
T cd08299 244 DYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGG 320 (373)
T ss_pred ccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecC
Confidence 32223444444443 358999999999766777766655 6799999999654322333333 23466788877653
Q ss_pred ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 309 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 309 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
...+.++++.+.++.+++.+.+++.|++ +++++|++.+++++. .|+++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 321 WKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred CccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence 2567778888888877667778899999 999999999987754 5888764
No 37
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1e-42 Score=321.46 Aligned_cols=337 Identities=53% Similarity=0.956 Sum_probs=280.6
Q ss_pred EEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 018075 18 AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97 (361)
Q Consensus 18 ~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 97 (361)
.++.+++.+++++.+.|++.++||+|||.++++|+.|++...+...+......|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 81 (343)
T cd05285 2 AVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDR 81 (343)
T ss_pred ceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCE
Confidence 57788899999999999999999999999999999998865432222222345778999999999999999999999999
Q ss_pred EEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCC
Q 018075 98 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVG 177 (361)
Q Consensus 98 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~ 177 (361)
|++.+..+|+.|.+|..|+..+|+...+++.....|+|++|++++++.++++|+++++++|+.+.++.+|+++++.++++
T Consensus 82 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~~ 161 (343)
T cd05285 82 VAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVR 161 (343)
T ss_pred EEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCCC
Confidence 99988889999999999999999987554433457999999999999999999999999998767888899888778999
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccch---hHHHHHHHhhcCCCccE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV---DTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~ 254 (361)
+|+++||.|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++.. .++ .+.+.+. ..+.++|+
T Consensus 162 ~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~--~~~~~~d~ 237 (343)
T cd05285 162 PGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAEL--LGGKGPDV 237 (343)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHH--hCCCCCCE
Confidence 9999999988999999999999999965888888899999999999998877543 232 3344333 23567999
Q ss_pred EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 018075 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 334 (361)
Q Consensus 255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~ 334 (361)
+|||+|+...++..+++|+++|+++.+|.......++...+.++++++.++....+.++.++++++++.+.+.+...+.|
T Consensus 238 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 317 (343)
T cd05285 238 VIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHRF 317 (343)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEEE
Confidence 99999976688999999999999999986554334444567788888888776667889999999999875445567888
Q ss_pred cCChhhHHHHHHHHhcCC-CceEEEEe
Q 018075 335 GFTQKEIEDAFEISAQGG-NAIKVMFN 360 (361)
Q Consensus 335 ~l~~~~~~~a~~~l~~~~-~~gkvvi~ 360 (361)
++ +++.+|++.+.+++ ..+|++|.
T Consensus 318 ~l--~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 318 PL--EDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred eH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence 88 99999999999884 45899873
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.7e-42 Score=318.63 Aligned_cols=329 Identities=23% Similarity=0.383 Sum_probs=277.8
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|+++++.++ +.++++++|.|++.++||+|||.++++|++|+....|.... ...|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence 467777777 68999999999999999999999999999999888764321 25588999999999999999999999
Q ss_pred CCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 94 VGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 94 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
+||+|++.+. ..|+.|.+|+.|++..|+++...+. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 9999998653 5799999999999999998765443 23699999999999999999999999888855 4678889888
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
+...++++++|||+|+|++|++++++|+.+|+ .+++++.++++.+.++++|++.++++.. .++...+.++ .+
T Consensus 157 ~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~~ 228 (333)
T cd08296 157 RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----GG 228 (333)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----CC
Confidence 77789999999999999999999999999999 5888888999999999999988776433 3454444332 37
Q ss_pred ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI 330 (361)
Q Consensus 252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 330 (361)
+|++||+.|.+..+...+++++++|+++.+|......+++...++.+++++.+.... ..++..++++++++.+ ++.+
T Consensus 229 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~v 306 (333)
T cd08296 229 AKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV--RPMV 306 (333)
T ss_pred CCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC--CceE
Confidence 999999987666899999999999999999976544455555677899999998754 5678889999999888 4444
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 331 THRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+.|++ +++.+|++.+.+++..||+|++
T Consensus 307 -~~~~~--~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 307 -ETFPL--EKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred -EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence 57888 9999999999999999999875
No 39
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=4.2e-42 Score=317.01 Aligned_cols=334 Identities=36% Similarity=0.674 Sum_probs=275.1
Q ss_pred EEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 018075 19 WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98 (361)
Q Consensus 19 ~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 98 (361)
|+++++.+.+++.++|+++++||+|||.++++|++|+...++...+.....+|.++|+|++|+|+++|+++++|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence 56788999999999999999999999999999999987653211111223467899999999999999999999999999
Q ss_pred EecCCcCCCCCccccCCCCCCCCCccccCCC----CCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075 99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174 (361)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~ 174 (361)
++.+..+|++|.+|..|+.+.|+++.+++.. ...|+|++|+.++.+.++++|+++++++|+.+.++.+||+++...
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~ 161 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA 161 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence 9998889999999999999999987655421 247999999999999999999999999988767888899998764
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
...++++|||.|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++.. .++ .++.. ...++|+
T Consensus 162 ~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~~----~~~~~-~~~~vd~ 234 (339)
T cd08232 162 GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DPL----AAYAA-DKGDFDV 234 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hhh----hhhhc-cCCCccE
Confidence 4349999999988999999999999999966888888888889999999988776532 221 12211 2356999
Q ss_pred EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 018075 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 334 (361)
Q Consensus 255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~ 334 (361)
+||+.+....++.++++|+++|+++.+|............+..+++++.+.....+.++.+++++++|.+++.+.+.+.|
T Consensus 235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 314 (339)
T cd08232 235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVF 314 (339)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEe
Confidence 99999976588999999999999999985443223333445667788888766667889999999999986666677888
Q ss_pred cCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 335 GFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 335 ~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++ ++++++++.+.++...||+|+++
T Consensus 315 ~~--~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 315 PL--EEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred cH--HHHHHHHHHHHhCCCceeEEEeC
Confidence 88 99999999999888899999874
No 40
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.7e-41 Score=315.67 Aligned_cols=333 Identities=28% Similarity=0.465 Sum_probs=273.6
Q ss_pred eEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~-~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
+++++.+ .+.+.+++++.|.+++++|+|++.++++|++|++...+... ...|.++|||++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4566664 46899999999999999999999999999999988776432 356789999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCC--------------------CCCceeEEEEecCCceEECCCCCC
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--------------------TNGSLAHKVVHPAKLCYKLPDNVS 154 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~~~~~~~~~~~vP~~~~ 154 (361)
||+|++.+..+|+.|.+|+.|.+.+|+...+++... ..|+|++|+.++++.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 999999888899999999999999998866543110 247999999999999999999999
Q ss_pred cccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075 155 LEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232 (361)
Q Consensus 155 ~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 232 (361)
+++|+.+. ++.+||+++. .+++++|++|||+|+|++|++++++|+.+|+..++++++++++.+.++++|++.+++...
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~ 237 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD 237 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc
Confidence 99988665 7888998875 488999999999999999999999999999977888888999999999999988776433
Q ss_pred CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhc-CCCEEEEEccCC--CCcceechHhhhcCcEEEEeecC-
Q 018075 233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR-PGGKVCLIGLAK--TEMTVALTPAAAREVDVIGIFRY- 308 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~- 308 (361)
...++.+.+.++. +.++|++||++|....+..++++++ ++|+++.+|... ....+....+ .+..++.|.+..
T Consensus 238 ~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~ 313 (365)
T cd05279 238 QDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG 313 (365)
T ss_pred ccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence 1114444444432 4689999999987668999999999 999999998653 2223333344 667778776432
Q ss_pred ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 309 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 309 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
.+.+..++++++++.+++.+..++++++ +++++|++.+++++. .|+++
T Consensus 314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 314 WKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred CchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeee
Confidence 5678899999999999766678888888 999999999988755 46665
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.7e-41 Score=316.29 Aligned_cols=338 Identities=32% Similarity=0.510 Sum_probs=275.4
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|++.++.+++.++++++|.|+| ++++|+||+.++++|++|+....|.... .++|.++|+|++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence 3566677888999999999998 5999999999999999999988775422 34688999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccC---------------C----CCCCCceeEEEEecCC--ceEECCCC
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---------------S----PPTNGSLAHKVVHPAK--LCYKLPDN 152 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~g~~~~~~~~~~~--~~~~vP~~ 152 (361)
+||+|++.+...||+|.+|+.+.+.+|+++.... . ....|+|++|++++.+ .++++|++
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 9999999888889999999999999999764221 0 0136999999999988 89999999
Q ss_pred CCccccccc-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075 153 VSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231 (361)
Q Consensus 153 ~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 231 (361)
+++++|+.+ ..+.+||++++.+.+++|++|||+|+|++|++++++|+..|+..+++++.++++.+++++++...++++.
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~ 237 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE 237 (386)
T ss_pred CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCC
Confidence 999998865 4788999999668899999999999999999999999999986689999999999999998444555433
Q ss_pred CCccchhHHHHHHHhhcCCCccEEEEccCCh---------------------HHHHHHHHhhcCCCEEEEEccCCCC-cc
Q 018075 232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------------KTMSTALNATRPGGKVCLIGLAKTE-MT 289 (361)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~~-~~ 289 (361)
.. .++.+.+.++. .+.++|++||++|+. ..++.++++++++|+++.+|..... ..
T Consensus 238 ~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 238 EV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 21 13555554442 345799999999752 3678899999999999999865432 22
Q ss_pred eechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEe
Q 018075 290 VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN 360 (361)
Q Consensus 290 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~-~~gkvvi~ 360 (361)
+.......++.++.+.... .+.++.++++++++++...+.+++.|++ +++++|++.+.+++ ..+|+|++
T Consensus 315 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred cCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEec
Confidence 3333456778888876544 5678899999999999665556788888 99999999998886 56899986
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=3.1e-41 Score=311.36 Aligned_cols=333 Identities=29% Similarity=0.493 Sum_probs=277.6
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
+++++.++ +.+++++.+.|++.+++|+|||.++++|++|+....|......+...|.++|+|++|+|+++|+++..+++
T Consensus 2 ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 81 (340)
T cd05284 2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKE 81 (340)
T ss_pred eeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcC
Confidence 56666666 67999999999999999999999999999999887765432233466889999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR 173 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~ 173 (361)
||+|++.+...|+.|..|+.|...+|++..+++. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||+++..
T Consensus 82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~ 160 (340)
T cd05284 82 GDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKK 160 (340)
T ss_pred CCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHH
Confidence 9999998888999999999999999999888775 46899999999999999999999999888866 478899999865
Q ss_pred --cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 174 --ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 174 --~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
..+.++++|||+|+|++|++++++|+.+| . .++++++++++.+.++++|+++++++.. . +...+.++. .+.
T Consensus 161 ~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~--~~~ 234 (340)
T cd05284 161 ALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELT--GGR 234 (340)
T ss_pred hcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHh--CCC
Confidence 36889999999998889999999999999 6 5777888899999999999988776532 2 545554442 345
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL 329 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 329 (361)
++|+++|++|+....+.++++|+++|+++.+|.... ..+.......+++++.+.... .+.+..+++++++|.+. +
T Consensus 235 ~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~- 310 (340)
T cd05284 235 GADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK--V- 310 (340)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC--c-
Confidence 799999999976689999999999999999986553 233333445678888876543 66788999999999984 3
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..+.|++ +++++|++.+++++..||+++..
T Consensus 311 ~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 311 EITKFPL--EDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ceEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence 3456888 99999999999998899999863
No 43
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.2e-41 Score=313.78 Aligned_cols=334 Identities=28% Similarity=0.434 Sum_probs=272.9
Q ss_pred ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 13 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
++|+++++.++ +.+++++.+.|++.++||+|||.++|+|++|++...|... ...|.++|+|++|+|+++|+++.+
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~ 76 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTG 76 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence 45677777764 6789999999999999999999999999999998876432 346889999999999999999999
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC----------------------CCCCCceeEEEEecCCceEEC
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----------------------PPTNGSLAHKVVHPAKLCYKL 149 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~~~~~~~~~v 149 (361)
+++||+|+..+. .|+.|.+|+.|+.++|++...... ....|+|++|++++++.++++
T Consensus 77 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 77 LKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred CCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 999999998764 899999999999999987542210 123689999999999999999
Q ss_pred CCCCCccccccc-chhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE
Q 018075 150 PDNVSLEEGAMC-EPLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 227 (361)
Q Consensus 150 P~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~ 227 (361)
|+++++++++.+ ..+.+|+.++. ...+++|++|||+|+|++|++++|+|+.+|++.+++++.++++.++++++|++.+
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~ 235 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHV 235 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEE
Confidence 999999888755 47788888874 4789999999999999999999999999999879999999999999999999887
Q ss_pred eecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC--CCcceechHhhhcCcEEEEe
Q 018075 228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAAAREVDVIGI 305 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~ 305 (361)
+++.. .++.+.+.+.. +.++|++||++|....+..++++++++|+++.+|... ....++...+..++.++.++
T Consensus 236 i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (365)
T cd08278 236 INPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV 310 (365)
T ss_pred ecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence 76432 35555554432 5689999999997668999999999999999998653 22344445555778888776
Q ss_pred ecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 306 FRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 306 ~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
... .+.++++++++++|.+.+.+.+ ..|++ +++++|++.+.+++. -|+|++
T Consensus 311 ~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 311 IEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF--EDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred ecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence 543 3467889999999998433334 57888 999999999988765 488774
No 44
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=3e-41 Score=312.35 Aligned_cols=336 Identities=31% Similarity=0.532 Sum_probs=274.9
Q ss_pred eEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
+++++.+++.+.+.+.|.|.+ .+++|+|||.++++|++|++...|.... .++|.++|+|++|+|+++|++++++++
T Consensus 2 ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~ 78 (347)
T cd05278 2 KALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLKP 78 (347)
T ss_pred ceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccCC
Confidence 566777888899999999999 9999999999999999999887765422 356889999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccC--CCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHH
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG--SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVH 169 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~ 169 (361)
||+|++.+..+||.|.+|+.|+...|++..++. +....|+|++|++++++ .++++|+++++++|+.+ ..+.+||+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~ 158 (347)
T cd05278 79 GDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFH 158 (347)
T ss_pred CCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheee
Confidence 999999989999999999999999999866442 22347999999999987 99999999999998866 47899999
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
++...++++|++|||.|+|++|++++|+|+.+|...++++++++++.++++++|++.++++.. .++.+.+..+. .+
T Consensus 159 ~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--~~ 234 (347)
T cd05278 159 GAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--GG 234 (347)
T ss_pred hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--CC
Confidence 986688999999999888999999999999999756788888889999999999888776543 34555554432 34
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcce-echHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV-ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 327 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~ 327 (361)
.++|++||++++...++..+++|+++|+++.+|........ .......++.++.+.... .+.+++++++++++.+.+.
T Consensus 235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 314 (347)
T cd05278 235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPS 314 (347)
T ss_pred CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChh
Confidence 68999999999755899999999999999999854432211 111223456666654333 4678899999999999654
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCC-ceEEEEe
Q 018075 328 PLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 360 (361)
Q Consensus 328 ~~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~ 360 (361)
+...+.+++ ++++++++.+..++. .+|+|++
T Consensus 315 ~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 315 KLITHRFPL--DDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred HcEEEEecH--HHHHHHHHHHhcCCCCceEEEec
Confidence 446677888 999999999988876 7899886
No 45
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2.4e-41 Score=317.92 Aligned_cols=342 Identities=21% Similarity=0.243 Sum_probs=277.4
Q ss_pred CcccceEEEEee-----C-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccc------c-CCCCcccCcc
Q 018075 11 DKNQNMAAWLLG-----I-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF------I-VKKPMVIGHE 77 (361)
Q Consensus 11 ~~~~~~~~~~~~-----~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~------~-~~~p~~~G~e 77 (361)
.|.++++.++.. + +.++++++|.|+++++||+|+|.++++|++|++...+...... . ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 456677776652 2 3589999999999999999999999999999987765411100 0 1123589999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccc
Q 018075 78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE 157 (361)
Q Consensus 78 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~ 157 (361)
++|+|+++|++++.+++||+|++.+...|+.|..|+.+.+++|+...+++.....|+|++|++++...++++|+++++++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999999988899999999999999999888887665679999999999999999999999998
Q ss_pred cccc-chhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075 158 GAMC-EPLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232 (361)
Q Consensus 158 aa~~-~~~~~a~~~l~~---~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 232 (361)
++.+ .++.+||+++.. +++++|++|||+|+ |++|++++++|+.+|++ +++++.++++.+.++++|++.+++...
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~~ 247 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRRD 247 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 8754 588999998753 67899999999995 99999999999999995 667788899999999999988877532
Q ss_pred Cc--------------------cchhHHHHHHHhhcCC-CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-Ccce
Q 018075 233 DI--------------------EDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTV 290 (361)
Q Consensus 233 ~~--------------------~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~ 290 (361)
.+ ..+.+.+.++. .+. ++|++||++|+. .+...+++++++|+++.+|.... ...+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 324 (393)
T cd08246 248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTGYNHTY 324 (393)
T ss_pred cccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCCCCCCC
Confidence 11 01233333332 344 799999999974 88999999999999999986443 2234
Q ss_pred echHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEe
Q 018075 291 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN 360 (361)
Q Consensus 291 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~-~~~gkvvi~ 360 (361)
....+..++.++.+.+.. .+++.+++++++++.+ .+.++++|++ +++++|++.+.++ +..||+++-
T Consensus 325 ~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 325 DNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred cHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence 455667788888887655 4578899999999988 4456788888 9999999999999 788999874
No 46
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6.4e-41 Score=309.38 Aligned_cols=328 Identities=29% Similarity=0.501 Sum_probs=263.8
Q ss_pred eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccc--------ccccCCCCcccCcceeEEEEEeCC
Q 018075 16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRC--------ANFIVKKPMVIGHECAGIIEEVGS 87 (361)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~--------~~~~~~~p~~~G~e~~G~V~~vG~ 87 (361)
+++++.++ .+++++++.|++++++|+|+|.++++|+.|++...|... .......|.++|+|++|+|+++|+
T Consensus 2 ~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08262 2 RAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGP 80 (341)
T ss_pred ceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCC
Confidence 45555555 899999999999999999999999999999988776211 001234578999999999999999
Q ss_pred CCCC-CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHH
Q 018075 88 EVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV 166 (361)
Q Consensus 88 ~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~ 166 (361)
++++ |++||+|++.+..+|+.|..|..|.. ....|+|+||+.++.+.++++|+++++++++.+.++++
T Consensus 81 ~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~~ 149 (341)
T cd08262 81 GTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAV 149 (341)
T ss_pred CCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHHH
Confidence 9987 99999999999999999998844321 12479999999999999999999999998886668888
Q ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCcc--chhHHHHHH
Q 018075 167 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE--DVDTDVGKI 244 (361)
Q Consensus 167 a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~~ 244 (361)
||+++..+++++|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++..... .+. .+.+
T Consensus 150 a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~- 227 (341)
T cd08262 150 GLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA- 227 (341)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH-
Confidence 998877788999999999999999999999999999977888888999999999999988777543211 111 1111
Q ss_pred HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCC
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 323 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~ 323 (361)
...+.++|++||++|+...+...+++++++|+++.+|...............++.++.+.... .+.++++++++++|.
T Consensus 228 -~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 306 (341)
T cd08262 228 -RAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGK 306 (341)
T ss_pred -HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCC
Confidence 223567999999999755788899999999999999865432222222234577777766544 457889999999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+.+.+.+.+.+++ ++++++++.+.+++..+|+|++
T Consensus 307 i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 307 VDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence 9665566788888 9999999999999999999974
No 47
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.6e-41 Score=308.84 Aligned_cols=336 Identities=33% Similarity=0.589 Sum_probs=273.0
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
++.++.++ +.+++++.|.|.|+++||+||+.++++|++|+.+..+..........|+++|+|++|+|+++|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~ 81 (341)
T PRK05396 2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV 81 (341)
T ss_pred ceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCC
Confidence 45555554 57999999999999999999999999999999876553211112346789999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~ 174 (361)
||+|++.+..+|+.|.+|..+.+++|++..+.+ ...+|+|++|+.++.+.++++|+++++++++.+.++.++++++..
T Consensus 82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~- 159 (341)
T PRK05396 82 GDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS- 159 (341)
T ss_pred CCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc-
Confidence 999999988899999999999999999765443 235799999999999999999999999888866677777666543
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
...+|++|+|.|+|++|++++|+|+..|++.++++++++++.++++++|++.++++.. .++.+.+.++. .+.++|+
T Consensus 160 ~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~~~~~d~ 235 (341)
T PRK05396 160 FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--MTEGFDV 235 (341)
T ss_pred CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--CCCCCCE
Confidence 3468999999989999999999999999966778888899999999999988876543 34555554442 3568999
Q ss_pred EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceEE
Q 018075 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITH 332 (361)
Q Consensus 255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~ 332 (361)
+|||.|....++.++++|+++|+++.+|.......+....+.+++.++.++... .+.+..++++++++ +...+.+.+
T Consensus 236 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 314 (341)
T PRK05396 236 GLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIITH 314 (341)
T ss_pred EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheEE
Confidence 999998777899999999999999999876544444456677788888876532 34566788999998 433555778
Q ss_pred EecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 333 RFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.+++ +++++|++.+.++. .||++++.
T Consensus 315 ~~~l--~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 315 RFPI--DDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred EEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence 8888 99999999998886 79999863
No 48
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=7.6e-41 Score=306.06 Aligned_cols=317 Identities=30% Similarity=0.501 Sum_probs=267.6
Q ss_pred eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075 16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95 (361)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (361)
+++++.+++.++++++|.|+++++||+|||.++++|++|+....|.. ..|.++|+|++|+|+++|++ +++|
T Consensus 2 ~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~G 72 (319)
T cd08242 2 KALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELVG 72 (319)
T ss_pred eeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCCC
Confidence 56677777889999999999999999999999999999998877643 35789999999999999998 6899
Q ss_pred CEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcC
Q 018075 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRAN 175 (361)
Q Consensus 96 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~ 175 (361)
|||...+...|+.|.+|..|.+.+|+.....+....+|+|++|++++.+.++++|+++++++++.+.++.+++..++..+
T Consensus 73 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~~ 152 (319)
T cd08242 73 KRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVP 152 (319)
T ss_pred CeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhcC
Confidence 99999888889999999999999999866554323479999999999999999999999988886556667777777788
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
+++|++|||+|+|.+|++++|+|+.+|++ +++++.++++.+.++++|++...++... ..+.++|++
T Consensus 153 ~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d~v 218 (319)
T cd08242 153 ITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFDVV 218 (319)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCCEE
Confidence 99999999999999999999999999995 7888888999999999999876654210 135689999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEec
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFG 335 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 335 (361)
||++|+...+...+++|+++|+++..+.......+....+..++.++.+.... .+++++++++++++++.+.+.+.|+
T Consensus 219 id~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~ 296 (319)
T cd08242 219 VEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAVYP 296 (319)
T ss_pred EECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEEEe
Confidence 99999866889999999999999987754444344455566788888876533 3889999999999976666889999
Q ss_pred CChhhHHHHHHHHhcCCCceEEEEe
Q 018075 336 FTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 336 l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+ +++++|++.+.++. .+|+|++
T Consensus 297 l--~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 297 L--EEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred H--HHHHHHHHHHhcCC-ceEEEeC
Confidence 9 99999999998775 5899886
No 49
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1e-40 Score=308.39 Aligned_cols=333 Identities=31% Similarity=0.536 Sum_probs=273.5
Q ss_pred eEEEEeeCCceEEEEecCCCCC-CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGIKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
++.++.+++.++++++++|+|. ++||+|+|.++++|+.|+....|... ...|.++|+|++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (344)
T cd08284 2 KAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLKV 77 (344)
T ss_pred eeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccCC
Confidence 4566667788999999999985 99999999999999999987766432 245789999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccC---CCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHH
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGV 168 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~ 168 (361)
||+|++.+..+|+.|.+|+.++...|++...++ ....+|+|++|+.++++ .++++|+++++++|+.+ ..+.+||
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~ 157 (344)
T cd08284 78 GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGY 157 (344)
T ss_pred CCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHH
Confidence 999999888899999999999999999876652 23347999999999965 99999999999888855 5889999
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
++++..++++|++|||+|+|++|++++++|+.+|+..++++++++++.++++++|+.. ++. ...++...+.++. .
T Consensus 158 ~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~l~~~~--~ 232 (344)
T cd08284 158 FGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVERVREAT--E 232 (344)
T ss_pred hhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHHHHHHHh--C
Confidence 9997788899999999999999999999999999756788888889999999999753 332 2234555554443 3
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeec-CCCcHHHHHHHHHcCCCCC
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFR-YRSTWPLCIEFLRSGKIDV 326 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~g~~~~ 326 (361)
+.++|++||++++.......+++++++|+++.+|.... .........+.+++++.+... ..+.+..+++++.++.+.+
T Consensus 233 ~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 312 (344)
T cd08284 233 GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDL 312 (344)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCCh
Confidence 56899999999977689999999999999999986652 222333445567777765432 2678999999999999865
Q ss_pred CCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.+.+.+.+++ ++++++++.+.+++. +|+|++
T Consensus 313 ~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 313 EFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred HHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence 4456678888 999999999998877 999985
No 50
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.4e-40 Score=307.60 Aligned_cols=338 Identities=31% Similarity=0.535 Sum_probs=277.1
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|+++++.+++.+++++.|.|+| .++||+|||.++++|++|+..+.|.... ...|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence 3566677778899999999986 8999999999999999999988775422 24478999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHHH
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVHA 170 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~~ 170 (361)
+||+|++.+...|+.|.+|..++...|....+..+....|+|++|+.++.+ .++++|+++++.+++.+ ..+.+||.+
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 157 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC 157 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence 999999988888999999999988888876554333457999999999987 89999999999888855 567888887
Q ss_pred HH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 171 CR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 171 l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+. ..++++|+++||.|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++.. .++...+..+. .+
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~ 233 (345)
T cd08286 158 GVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELT--DG 233 (345)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHh--CC
Confidence 54 478999999999999999999999999999446888888999999999999988777543 34544444432 35
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCc
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL 329 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~ 329 (361)
.++|++||++|....++.++++|+++|+++.+|.......+....++.++.++.+.....+.+..++++++++.+.+.+.
T Consensus 234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (345)
T cd08286 234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKL 313 (345)
T ss_pred CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHc
Confidence 68999999999777889999999999999999865443344455556678888775443467888999999999866556
Q ss_pred eEEEecCChhhHHHHHHHHhcCC--CceEEEEeC
Q 018075 330 ITHRFGFTQKEIEDAFEISAQGG--NAIKVMFNL 361 (361)
Q Consensus 330 ~~~~~~l~~~~~~~a~~~l~~~~--~~gkvvi~~ 361 (361)
+++.+++ ++++++++.+.... ...|++|++
T Consensus 314 ~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 314 VTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred EEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence 7788998 99999999998764 356888864
No 51
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1e-40 Score=312.26 Aligned_cols=331 Identities=30% Similarity=0.538 Sum_probs=269.3
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc----cccCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 018075 23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA----NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98 (361)
Q Consensus 23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 98 (361)
...++++++|.|++++++|+|||.++|+|++|++...+...+ .....+|.++|||++|+|+++|+++++|++||+|
T Consensus 36 ~~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 115 (384)
T cd08265 36 YPELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPV 115 (384)
T ss_pred CCCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEE
Confidence 347999999999999999999999999999999877532111 1113568899999999999999999999999999
Q ss_pred EecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCC-------CCcccccccchhHHHHHHH
Q 018075 99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN-------VSLEEGAMCEPLSVGVHAC 171 (361)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~-------~~~~~aa~~~~~~~a~~~l 171 (361)
++.+..+|+.|..|+.|++.+|+.+...+. ...|+|++|+.++++.++++|++ ++++.|+.+.++.+||+++
T Consensus 116 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al 194 (384)
T cd08265 116 TAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGL 194 (384)
T ss_pred EECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999998776553 24799999999999999999986 4556555667889999998
Q ss_pred H-h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC-ccchhHHHHHHHhhc
Q 018075 172 R-R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAM 248 (361)
Q Consensus 172 ~-~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~ 248 (361)
. . .++++|++|||+|+|++|++++++|+.+|+..++++++++++.++++++|++.++++... ..++...+.++. .
T Consensus 195 ~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~--~ 272 (384)
T cd08265 195 FIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT--K 272 (384)
T ss_pred HhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc--C
Confidence 4 3 689999999999999999999999999999778888888899999999999887765432 124545554443 3
Q ss_pred CCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCC
Q 018075 249 GSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKID 325 (361)
Q Consensus 249 ~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~ 325 (361)
+.++|+|+|+.|.+ ..+..++++|+++|+++.+|.......+....+..+..++.+.... ...+++++++++++.+.
T Consensus 273 g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~ 352 (384)
T cd08265 273 GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKID 352 (384)
T ss_pred CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCC
Confidence 56899999999863 4778999999999999999865443344445566677788777542 45799999999999996
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 326 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 326 ~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
+...+.+.|++ +++++|++.+.++ ..+|+++
T Consensus 353 ~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 353 MTKIITARFPL--EGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred hHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence 54456788888 9999999997665 6788875
No 52
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.2e-40 Score=306.29 Aligned_cols=334 Identities=29% Similarity=0.502 Sum_probs=274.1
Q ss_pred ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|++.++.+++++.+++.|.|.| +++||+||+.++++|++|+....|... ...|.++|||++|+|+++|+++..++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence 4566777888999999999986 899999999999999999887766432 24578999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC--ceEECCCCCCcccccc------cchhH
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAM------CEPLS 165 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~------~~~~~ 165 (361)
+||+|++....+|+.|.+|+.|+...|.+..+++ ...+|+|++|+.++.+ .++++|++++++.+.. ...+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 9999998667789999999999999999876655 3467999999999975 9999999998722211 14577
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075 166 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 166 ~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+|+++++..++++|++|+|.|+|++|++++|+|+..|++.++++++++++.++++++|++.++++.. .++.+.+.++.
T Consensus 156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~~ 233 (345)
T cd08287 156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVRELT 233 (345)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHhc
Confidence 8888887788999999999999999999999999999977888988888999999999988877543 34444444432
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCC
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI 324 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~ 324 (361)
.+.++|++||++|++..++.++++++++|+++.+|.......++....+.++.++.+.... .+.++++++++.++.+
T Consensus 234 --~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (345)
T cd08287 234 --GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRI 311 (345)
T ss_pred --CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCC
Confidence 3568999999998777899999999999999999865533334443456788888776543 5678999999999999
Q ss_pred CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 325 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 325 ~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++.+.+.+.+++ +++++|++.+..+.. .|++|+
T Consensus 312 ~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 312 NPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred CHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence 654556788888 999999999887755 499886
No 53
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=5e-40 Score=303.66 Aligned_cols=334 Identities=38% Similarity=0.672 Sum_probs=279.0
Q ss_pred eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075 16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95 (361)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (361)
++.++.+++.+.+++.+.|++.+++|+|||+++++|+.|+....|... +...|.++|+|++|+|+++|++++.+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~G 78 (343)
T cd08235 2 KAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKVG 78 (343)
T ss_pred eEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCCC
Confidence 566777778899999999999999999999999999999988766432 13457799999999999999999999999
Q ss_pred CEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCc-----eEECCCCCCcccccccchhHHHHHH
Q 018075 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL-----CYKLPDNVSLEEGAMCEPLSVGVHA 170 (361)
Q Consensus 96 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~vP~~~~~~~aa~~~~~~~a~~~ 170 (361)
|+|++.+...|+.|.+|..|+.++|+...+.+. ...|+|++|+.++.+. ++++|+++++.+|+++.++.+|+++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~ 157 (343)
T cd08235 79 DRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINA 157 (343)
T ss_pred CEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHHH
Confidence 999999888999999999999999998765443 3579999999999999 9999999999999876788889999
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
++..++++|++|||+|+|.+|++++|+|+..|++.++++++++++.+.++++|.+.+++++. .++.+.+.++. .+.
T Consensus 158 l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~ 233 (343)
T cd08235 158 QRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELT--DGR 233 (343)
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc--cCHHHHHHHHh--CCc
Confidence 87778999999999998999999999999999964788888888888889999988776533 45555554432 356
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 327 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~ 327 (361)
++|++||++++...+...+++|+++|+++.++..... ..+......++++++.++... .+.++.++++++++.+.+.
T Consensus 234 ~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~ 313 (343)
T cd08235 234 GADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVK 313 (343)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChH
Confidence 7999999999766889999999999999998854332 233345567788888776654 5678899999999998644
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+.+...+++ +++.++++.+.+++ .+|+|++
T Consensus 314 ~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 314 DLITHRFPL--EDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred HheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence 456677888 99999999999998 8999874
No 54
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.9e-40 Score=305.61 Aligned_cols=326 Identities=26% Similarity=0.421 Sum_probs=271.5
Q ss_pred EEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075 17 AAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95 (361)
Q Consensus 17 ~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (361)
++.++.+ +.+++++++.|++.++||+|||.++++|++|++...|... ....|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (337)
T cd05283 2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVG 78 (337)
T ss_pred ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCC
Confidence 3444544 6899999999999999999999999999999998876542 23568899999999999999999999999
Q ss_pred CEEEec-CCcCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHH
Q 018075 96 DRVALE-PGISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVG 167 (361)
Q Consensus 96 d~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a 167 (361)
|+|+.. ....|++|.+|..+..++|+++.+.. +....|+|+||+.++.+.++++|+++++++++.+ ..+.+|
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta 158 (337)
T cd05283 79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV 158 (337)
T ss_pred CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence 999843 44589999999999999999876542 1234799999999999999999999999988855 467889
Q ss_pred HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075 168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
|++++...+++|++++|.|+|++|++++++|+..|+ .++.+++++++.+.++++|++.+++... .++. +.
T Consensus 159 ~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~~---- 228 (337)
T cd05283 159 YSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---KK---- 228 (337)
T ss_pred HHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---hh----
Confidence 999887779999999998899999999999999999 6888888889999999999888765432 2221 11
Q ss_pred cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCC
Q 018075 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV 326 (361)
Q Consensus 248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~ 326 (361)
.+.++|++||+++.......++++|+++|+++.+|.......++...++.++.++.+.... .++++.+++++++|++
T Consensus 229 ~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l-- 306 (337)
T cd05283 229 AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGI-- 306 (337)
T ss_pred ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCC--
Confidence 2468999999999875589999999999999999876544344555566789999987765 5678899999999998
Q ss_pred CCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++.+ +.|++ +++++|++.+++++..||+|++
T Consensus 307 ~~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 307 KPWV-EVIPM--DGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred ccce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence 4444 67888 9999999999999999999875
No 55
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=8.7e-40 Score=301.33 Aligned_cols=334 Identities=38% Similarity=0.672 Sum_probs=273.6
Q ss_pred eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075 16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95 (361)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (361)
++.++..++.+++.+++.|++.++||+|+|.++++|+.|+....+.... ...|.++|+|++|+|+++|++++.+++|
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~G 78 (337)
T cd08261 2 KALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKVG 78 (337)
T ss_pred eEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCCC
Confidence 5566666788999999999999999999999999999999887664322 2447789999999999999999999999
Q ss_pred CEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcC
Q 018075 96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRAN 175 (361)
Q Consensus 96 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~ 175 (361)
|+|++.+..+|+.|.-|..++++.|..-..++ ....|+|++|+.++++ ++++|+++++++|+++..+.+++++++..+
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~~ 156 (337)
T cd08261 79 DRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAG 156 (337)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhcC
Confidence 99999888899999999999999995321111 1237999999999999 999999999999987677788888886688
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
+++|++|||+|+|.+|++++|+|+.+|+ .++++.+++++.++++++|+++++++.. .++.+.+.++. .+.++|++
T Consensus 157 l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~~~vd~v 231 (337)
T cd08261 157 VTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DGEGADVV 231 (337)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CCCCCCEE
Confidence 9999999999989999999999999999 5777778899999999999988887543 34555555442 34679999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEe
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRF 334 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~ 334 (361)
||++|+...+..++++|+++|+++.++.......+....+..+++++.+.... .+.++.+++++++|.+.+.+.+...+
T Consensus 232 ld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~ 311 (337)
T cd08261 232 IDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRF 311 (337)
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEe
Confidence 99998766899999999999999999865543333444556677777765433 45788999999999995432566788
Q ss_pred cCChhhHHHHHHHHhcC-CCceEEEEeC
Q 018075 335 GFTQKEIEDAFEISAQG-GNAIKVMFNL 361 (361)
Q Consensus 335 ~l~~~~~~~a~~~l~~~-~~~gkvvi~~ 361 (361)
++ ++++++++.+.++ ...+|+|+++
T Consensus 312 ~~--~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 312 PF--EDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred eH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence 88 9999999999988 4889999875
No 56
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=6.5e-40 Score=304.95 Aligned_cols=334 Identities=33% Similarity=0.507 Sum_probs=271.1
Q ss_pred ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|++.++.++ +.+++++++.|++++++|+|+|.++++|+.|+....|... ..+|.++|+|++|+|+++|+++..++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence 355566655 6789999999999999999999999999999988776432 35678999999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-------------------CCCCCceeEEEEecCCceEECCCCCC
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-------------------PPTNGSLAHKVVHPAKLCYKLPDNVS 154 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~~~~~~~~~vP~~~~ 154 (361)
+||+|++.+...|++|.+|++++.+.|++..++-. ....|+|++|+.++++.++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99999999999999999999999999987532100 02469999999999999999999999
Q ss_pred cccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075 155 LEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232 (361)
Q Consensus 155 ~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 232 (361)
+++++.+. .+.+||.++. ..++++|++|||+|+|++|++++++|+..|++.|+.+++++++.++++++|++.+++...
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~ 236 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE 236 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC
Confidence 99888664 6788888874 488999999999988999999999999999966888889999999999999987766432
Q ss_pred CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeec---
Q 018075 233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFR--- 307 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~--- 307 (361)
.++...+.++. .+.++|++||++++...+...+++|+++|+++.++.... ...+....+..+...+.+...
T Consensus 237 --~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (363)
T cd08279 237 --DDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSA 312 (363)
T ss_pred --ccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCc
Confidence 34544444432 256799999999966688999999999999999986542 223344445556666666532
Q ss_pred -CCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEE
Q 018075 308 -YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358 (361)
Q Consensus 308 -~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvv 358 (361)
..+.+++++++++++.+.+.+.+.+.|++ +++++|++.+.+++..+.++
T Consensus 313 ~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 313 NPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI 362 (363)
T ss_pred CcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence 25678899999999999655456788888 99999999999887765554
No 57
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=7.3e-40 Score=305.72 Aligned_cols=333 Identities=27% Similarity=0.449 Sum_probs=268.7
Q ss_pred eEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
++.++.+++.++++++|+|++ +++||+|||.++++|++|++...|... ...|+++|||++|+|+++|+++..+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~~ 77 (375)
T cd08282 2 KAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLKV 77 (375)
T ss_pred ceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCCC
Confidence 455566788999999999996 799999999999999999998876442 346889999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccc---------cCCCCCCCceeEEEEecCC--ceEECCCCCCccc---cc-
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRF---------FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEE---GA- 159 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~---aa- 159 (361)
||+|++.+...|+.|..|..++..+|.+..+ .......|+|++|+.++.+ .++++|+++++++ ++
T Consensus 78 Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~ 157 (375)
T cd08282 78 GDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLM 157 (375)
T ss_pred CCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheee
Confidence 9999998888999999999999999986421 1112236999999999976 8999999999984 44
Q ss_pred ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhH
Q 018075 160 MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 239 (361)
Q Consensus 160 ~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 239 (361)
+..++.+||+++..+++++|++|||.|+|++|++++|+|+..|+..++++++++++.++++++|+. .+++. ..++.+
T Consensus 158 ~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~--~~~~~~ 234 (375)
T cd08282 158 LSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS--DGDPVE 234 (375)
T ss_pred ecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--cccHHH
Confidence 445788999999668899999999998999999999999999986678898999999999999984 34432 244444
Q ss_pred HHHHHHhhcCCCccEEEEccCChH-----------HHHHHHHhhcCCCEEEEEccCCCC-------------cceechHh
Q 018075 240 DVGKIQNAMGSGIDVSFDCVGFDK-----------TMSTALNATRPGGKVCLIGLAKTE-------------MTVALTPA 295 (361)
Q Consensus 240 ~~~~~~~~~~~~~d~vld~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~~~ 295 (361)
.+.++. ++++|++|||+|+.. .+..++++++++|+++.+|..... ..+....+
T Consensus 235 ~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (375)
T cd08282 235 QILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLL 311 (375)
T ss_pred HHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHH
Confidence 444432 367999999998752 488999999999999988753311 12233445
Q ss_pred hhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 296 AAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 296 ~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..++..+.+.... .+.+..++++++++++.+...+.+.+++ +++++|++.+.++. .+|+|+++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 312 WAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred HhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence 5666766665443 5678889999999999654457899999 99999999999988 89999864
No 58
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=5.8e-40 Score=302.89 Aligned_cols=335 Identities=33% Similarity=0.581 Sum_probs=271.6
Q ss_pred eEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
++.++.+++ .+++.+.+.|.|.++|++|||.++++|+.|+....+..........|.++|+|++|+|+.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~ 81 (341)
T cd05281 2 KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKV 81 (341)
T ss_pred cceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCC
Confidence 455566554 6999999999999999999999999999998865432111112345778999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~ 174 (361)
||+|++.+..+|++|.+|+.|.+++|++.++.+. ...|+|++|++++.+.++++|++++++.++++.++.++++++. .
T Consensus 82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-~ 159 (341)
T cd05281 82 GDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-A 159 (341)
T ss_pred CCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-h
Confidence 9999998888999999999999999998776653 3579999999999999999999999876766678888888775 4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
..++|++|||.|+|++|++++|+|+.+|.+.++++++++++.+.++++|++.++++. ..++. .+.++. .++++|+
T Consensus 160 ~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~--~~~~vd~ 234 (341)
T cd05281 160 GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT--DGTGVDV 234 (341)
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc--CCCCCCE
Confidence 458999999998899999999999999986677778889999999999998776543 23454 444432 3568999
Q ss_pred EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech-HhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceE
Q 018075 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLIT 331 (361)
Q Consensus 255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~ 331 (361)
+||++|+......++++|+++|+++.+|........... ....++.++.+.... .+.++++++++.+|.+.+.+.+.
T Consensus 235 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 314 (341)
T cd05281 235 VLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVIT 314 (341)
T ss_pred EEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheE
Confidence 999998777889999999999999999865432222222 356677777776532 45678899999999986556677
Q ss_pred EEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 332 HRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 332 ~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+.+++ ++++++++.+.+++ .||+|++
T Consensus 315 ~~~~~--~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 315 HKLPL--EDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred EEecH--HHHHHHHHHHhcCC-CceEEec
Confidence 78888 99999999999998 8999985
No 59
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=6.6e-40 Score=303.64 Aligned_cols=335 Identities=28% Similarity=0.425 Sum_probs=275.4
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc---------cccCCCCcccCcceeEEEEEe
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA---------NFIVKKPMVIGHECAGIIEEV 85 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~~G~V~~v 85 (361)
++.++..+ ..++++++|.|++.++||+|+|.++++|++|++...|.... ......|.++|+|++|+|+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 81 (350)
T cd08240 2 KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAV 81 (350)
T ss_pred eeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEee
Confidence 45555544 45899999999999999999999999999999887663210 001244678999999999999
Q ss_pred CCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chh
Q 018075 86 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPL 164 (361)
Q Consensus 86 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~ 164 (361)
|++++.+++||+|++.+...|+.|..|..++.++|.....++. ...|+|++|+.++.+.++++|+++++.+++.+ ..+
T Consensus 82 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~ 160 (350)
T cd08240 82 GPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSG 160 (350)
T ss_pred CCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhchh
Confidence 9999999999999999889999999999999999988655543 25799999999999999999999999988855 578
Q ss_pred HHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHH
Q 018075 165 SVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 243 (361)
Q Consensus 165 ~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 243 (361)
.+||++++. ...+++++|||+|+|++|++++|+|+..|++.|+++++++++.+.++++|++.+++.. ..++.+.+.+
T Consensus 161 ~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~ 238 (350)
T cd08240 161 LTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS--DPDAAKRIIK 238 (350)
T ss_pred hhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC--CccHHHHHHH
Confidence 899999876 4556899999999999999999999999997788888999999999999998766542 2344444443
Q ss_pred HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC
Q 018075 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 322 (361)
Q Consensus 244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g 322 (361)
.. ++++|++||++|.......++++|+++|+++.+|..............+++.++.+.... .+++.++++++++|
T Consensus 239 ~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~ 315 (350)
T cd08240 239 AA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAG 315 (350)
T ss_pred Hh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcC
Confidence 32 338999999999766899999999999999999866544344444556688888887655 46788999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.+. +...+.|++ ++++++++.+.+++..+|++++
T Consensus 316 ~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 316 KLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred CCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEec
Confidence 984 345567888 9999999999999889999986
No 60
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=6.7e-40 Score=305.40 Aligned_cols=335 Identities=32% Similarity=0.526 Sum_probs=275.8
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC---
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS--- 91 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 91 (361)
++.++..+ .++++++.|.|.+.++||+|++.++++|++|+....+... ...|.++|+|++|+|+++|+++++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 2 KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred eeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCCc
Confidence 44455454 5689999999999999999999999999999988766432 256789999999999999999988
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC---------------------CCCCCceeEEEEecCCceEECC
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS---------------------PPTNGSLAHKVVHPAKLCYKLP 150 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~~~~~~~~~~~vP 150 (361)
|++||+|++.+...|+.|.+|..+..++|++..+|.. ....|+|++|+.++.+.++++|
T Consensus 78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P 157 (367)
T cd08263 78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLP 157 (367)
T ss_pred CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECC
Confidence 9999999998888999999999999999998754321 0236899999999999999999
Q ss_pred CCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEe
Q 018075 151 DNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA 228 (361)
Q Consensus 151 ~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~ 228 (361)
+++++.+++.+ ..+.+||+++.. ..++++++|||+|+|++|++++++|+..|+..+++++.++++.+.++++|++.++
T Consensus 158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~ 237 (367)
T cd08263 158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237 (367)
T ss_pred CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEe
Confidence 99999988855 478899999865 6789999999999899999999999999996688888889999999999998877
Q ss_pred ecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEee
Q 018075 229 KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIF 306 (361)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~ 306 (361)
+... .++...+.... .+.++|++||++++......++++|+++|+++.++.... ...+....++.++.++.++.
T Consensus 238 ~~~~--~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (367)
T cd08263 238 NAAK--EDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY 313 (367)
T ss_pred cCCc--ccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence 6432 34544544432 357899999999976578999999999999999985543 22333444556788887765
Q ss_pred cC--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 307 RY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 307 ~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.. .+.++.++++++++.+.+.+.+++.+++ ++++++++.++++...||+|+.
T Consensus 314 ~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 314 GARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence 43 3578899999999999655556788888 9999999999999889999874
No 61
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=2.4e-40 Score=303.36 Aligned_cols=304 Identities=19% Similarity=0.252 Sum_probs=244.8
Q ss_pred eEEEEeeCC------ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075 16 MAAWLLGIK------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV 89 (361)
Q Consensus 16 ~~~~~~~~~------~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (361)
+++++.+++ .++++++|.|.|+++||+|||.++|+|++|++...|.... ....|.++|||++|+|+++|+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~v 79 (324)
T cd08291 2 KALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGGP 79 (324)
T ss_pred eEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCCc
Confidence 456665443 5888899999999999999999999999999988764321 13568899999999999999999
Q ss_pred CC-CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHH
Q 018075 90 KS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVG 167 (361)
Q Consensus 90 ~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a 167 (361)
++ |++||+|++.+. .+|+|+||+.++++.++++|+++++++|+.+ ....+|
T Consensus 80 ~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta 132 (324)
T cd08291 80 LAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTA 132 (324)
T ss_pred cccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHH
Confidence 96 999999986310 1499999999999999999999999988743 456677
Q ss_pred HHHHHhcCCCCCCEEEEE-C-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075 168 VHACRRANVGPETNVMIM-G-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 168 ~~~l~~~~~~~g~~vlI~-G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
|..++.... ++++++|+ | +|++|++++|+|+.+|+ .++++++++++.+.++++|++.++++.. .++.+.+.++.
T Consensus 133 ~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~~~ 208 (324)
T cd08291 133 LGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKELI 208 (324)
T ss_pred HHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHHHh
Confidence 765555554 56677775 4 79999999999999999 5888889999999999999999887543 45655555443
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-c-ceechHhhhcCcEEEEeecC-------CCcHHHHH
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-M-TVALTPAAAREVDVIGIFRY-------RSTWPLCI 316 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~ 316 (361)
.+.++|++||++|+. .....+++++++|+++.+|..... . .++...++.+++++.+++.. .+.++.++
T Consensus 209 --~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd08291 209 --AKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLK 285 (324)
T ss_pred --CCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHH
Confidence 356899999999977 678889999999999999865432 1 24345567788898887654 23577888
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 317 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++++ +.+ ++.++++|+| +++++|++.+.++...||+++.
T Consensus 286 ~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 286 KLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence 8887 777 6788899999 9999999999999899999874
No 62
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.9e-40 Score=309.19 Aligned_cols=343 Identities=20% Similarity=0.223 Sum_probs=274.1
Q ss_pred CcccceEEEEee-----C-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc------cc-cCCCC-cccCc
Q 018075 11 DKNQNMAAWLLG-----I-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA------NF-IVKKP-MVIGH 76 (361)
Q Consensus 11 ~~~~~~~~~~~~-----~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~------~~-~~~~p-~~~G~ 76 (361)
++.+|++.++.. | +.++++++|.|.+++++|+||+.++++|++|++...+.... .. ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 455666666632 2 46999999999999999999999999999998766543210 00 01223 38999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcc
Q 018075 77 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE 156 (361)
Q Consensus 77 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~ 156 (361)
|++|+|+++|++++.+++||+|++.+...|++|..|+.|++.+|+.+.+++.....|+|+||++++.+.++++|++++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~ 163 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE 163 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence 99999999999999999999999998899999999999999999987766655568999999999999999999999999
Q ss_pred ccccc-chhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075 157 EGAMC-EPLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231 (361)
Q Consensus 157 ~aa~~-~~~~~a~~~l~~---~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~ 231 (361)
+++.+ ..+.+||.++.. .++++|++|||+|+ |++|++++++|+.+|++ ++.++.++++.+.++++|++.++++.
T Consensus 164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~ 242 (398)
T TIGR01751 164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRN 242 (398)
T ss_pred HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCC
Confidence 88855 478889988753 67899999999995 99999999999999995 66677888899999999999888753
Q ss_pred CCc--------------------cchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cce
Q 018075 232 TDI--------------------EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTV 290 (361)
Q Consensus 232 ~~~--------------------~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~ 290 (361)
... ..+.+.+.++ +.+.++|++|||+|.. .+...+++++++|+++.+|..... ..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 319 (398)
T TIGR01751 243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTGYNHDY 319 (398)
T ss_pred CcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccCCCCCc
Confidence 210 0112222222 2346799999999964 889999999999999999865432 344
Q ss_pred echHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 291 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 291 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+...+..++.++.+.... .+++++++++++++++ .+.+++.+++ ++++++++.+.++...||+|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 455566677777776543 3457889999999998 4557788888 99999999999999999999864
No 63
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=6.2e-40 Score=302.58 Aligned_cols=329 Identities=34% Similarity=0.627 Sum_probs=269.2
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
..+++++.|.|+|+++||+|||.++++|+.|+....+..........|.++|+|++|+|+++|+++++|++||+|++.+.
T Consensus 9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 88 (340)
T TIGR00692 9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH 88 (340)
T ss_pred CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence 56899999999999999999999999999999876543211112345778999999999999999999999999999988
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVM 183 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vl 183 (361)
..|+.|..|..+..++|++..+++. ...|+|++|++++++.++++|+++++++|+...++.+|++++ ....++|++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl 166 (340)
T TIGR00692 89 IVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL 166 (340)
T ss_pred CCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence 8999999999999999999866642 257999999999999999999999987777667888888876 34568999999
Q ss_pred EECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075 184 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 263 (361)
Q Consensus 184 I~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 263 (361)
|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .++.+.+.++. .+.++|++||++|+..
T Consensus 167 I~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~~g~~~ 242 (340)
T TIGR00692 167 VTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEMSGAPK 242 (340)
T ss_pred EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEECCCCHH
Confidence 9888999999999999999965777888899999999999987776432 45555554442 3568999999998777
Q ss_pred HHHHHHHhhcCCCEEEEEccCCCCcceech-HhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceEEEecCChhh
Q 018075 264 TMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 340 (361)
Q Consensus 264 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~ 340 (361)
.+...+++|+++|+++.+|.......+... .+.++..++.+.... .+.+.++++++++|.++..+.+.+.+++ ++
T Consensus 243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~ 320 (340)
T TIGR00692 243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DK 320 (340)
T ss_pred HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeH--HH
Confidence 889999999999999999865433233333 566777888776532 4567889999999999654557788888 99
Q ss_pred HHHHHHHHhcCCCceEEEEeC
Q 018075 341 IEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 341 ~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++++++.+.++.. ||+|+++
T Consensus 321 ~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 321 FEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred HHHHHHHHhcCCC-ceEEEeC
Confidence 9999999998864 9999874
No 64
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=1.7e-39 Score=300.05 Aligned_cols=333 Identities=39% Similarity=0.677 Sum_probs=274.3
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
|+++++.+.+.+.+++.++|++.++||+||+.++++|+.|+....+.. ....|.++|+|++|+|+++|+++..|++
T Consensus 1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence 356666677789999999999999999999999999999998776532 2345789999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~ 174 (361)
||+|++.+...|+.|.+|..+++..|+...+++. ...|+|++|+.++++.++++|+++++++|+.++++.+||+++...
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~ 155 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA 155 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence 9999998888899999999999999998765553 357999999999999999999999999998777788999998778
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
.++++++|||+|+|.+|++++|+|+.+|++.+++++.++++.++++++|++.++++.. .. ...+..+. .+.++|+
T Consensus 156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d~ 230 (343)
T cd08236 156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGADL 230 (343)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCCE
Confidence 8999999999998999999999999999965888888888889999999988776543 22 33333332 3567999
Q ss_pred EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcce---echHhhhcCcEEEEeecC------CCcHHHHHHHHHcCCCC
Q 018075 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKID 325 (361)
Q Consensus 255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~~~ 325 (361)
+|||+|....+..++++|+++|+++.+|.......+ +...+..++.++.++... .+.+++++++++++.+.
T Consensus 231 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (343)
T cd08236 231 VIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIK 310 (343)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCC
Confidence 999998766889999999999999999865433111 223345677888776543 45688899999999985
Q ss_pred CCCceEEEecCChhhHHHHHHHHhc-CCCceEEEE
Q 018075 326 VKPLITHRFGFTQKEIEDAFEISAQ-GGNAIKVMF 359 (361)
Q Consensus 326 ~~~~~~~~~~l~~~~~~~a~~~l~~-~~~~gkvvi 359 (361)
..+.+.+.+++ ++++++++.+.+ +...+|+|+
T Consensus 311 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 311 VEPLITHRLPL--EDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred hHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence 43446678888 999999999998 667888875
No 65
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=2.2e-39 Score=298.77 Aligned_cols=330 Identities=26% Similarity=0.428 Sum_probs=268.1
Q ss_pred ceEEEEeeCCceE-EEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGIKTLK-IQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~~~l~-~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|+++++.+++... ++++|.|.+.++||+|||.++++|++|+....|... ...|.++|+|++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence 4566676666555 899999999999999999999999999988766431 23477999999999999999999999
Q ss_pred CCCEEEecC-CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 94 VGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 94 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
+||+|++.+ ..+|+.|.+|..+...+|.+....+. ...|+|+||+.++.+.++++|+++++.+++.+ ..+.+||+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~ 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence 999999864 45899999999999999987754432 35799999999999999999999999988855 4678899998
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+.+++++|++|||+|+|++|++++++|+. .|+ .++++++++++.+.++++|++.++++.. ..++.+.+.+. .+
T Consensus 156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~---~~- 229 (338)
T PRK09422 156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEK---TG- 229 (338)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHh---cC-
Confidence 77889999999999999999999999998 499 6888889999999999999988776432 12344444433 23
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL 329 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 329 (361)
++|+++.+.++...+..++++++++|+++.+|.......+.......+..++.+.... .+.++.+++++++|.+ .+.
T Consensus 230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~ 307 (338)
T PRK09422 230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV--VPK 307 (338)
T ss_pred CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC--Ccc
Confidence 6895555445566899999999999999999865443344445566778888776543 5678899999999998 444
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+ ..+++ +++++|++.+.++...||++++
T Consensus 308 v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 308 V-QLRPL--EDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred E-EEEcH--HHHHHHHHHHHcCCccceEEEe
Confidence 4 45788 9999999999999999999985
No 66
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-39 Score=300.99 Aligned_cols=309 Identities=18% Similarity=0.210 Sum_probs=242.1
Q ss_pred cCCcccceEEEEe-------eCCceEEEE---ecCC-CCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCc-
Q 018075 9 EGDKNQNMAAWLL-------GIKTLKIQP---YHLP-TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH- 76 (361)
Q Consensus 9 ~~~~~~~~~~~~~-------~~~~l~~~~---~~~p-~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~- 76 (361)
+....++++.++. .++.+++++ .+.| ++++|||||||.++++|+.|.....+... ....|+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~ 79 (348)
T PLN03154 3 EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQR 79 (348)
T ss_pred CCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCe
Confidence 3344445555553 224688887 3665 35899999999999999998864432111 1235889997
Q ss_pred -ceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCc--eEE--CCC
Q 018075 77 -ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYK--LPD 151 (361)
Q Consensus 77 -e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--vP~ 151 (361)
|++|+|..+|+++++|++||+|+. .++|+||+.++.+. +.+ +|+
T Consensus 80 ~~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~~~~aey~~v~~~~~~~~~~~~P~ 128 (348)
T PLN03154 80 IEGFGVSKVVDSDDPNFKPGDLISG-------------------------------ITGWEEYSLIRSSDNQLRKIQLQD 128 (348)
T ss_pred eEeeEEEEEEecCCCCCCCCCEEEe-------------------------------cCCcEEEEEEeccccceEEccCcC
Confidence 889999999999999999999985 36899999998753 544 589
Q ss_pred CCCcc-cccc-cchhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCE
Q 018075 152 NVSLE-EGAM-CEPLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADE 226 (361)
Q Consensus 152 ~~~~~-~aa~-~~~~~~a~~~l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~ 226 (361)
+++++ +|+. ..++.|||+++.. .++++|++|||+|+ |++|++++|+||.+|+ .++++++++++.++++ ++|++.
T Consensus 129 ~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~ 207 (348)
T PLN03154 129 DIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDE 207 (348)
T ss_pred CCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCE
Confidence 99986 5554 4588999999864 88999999999995 9999999999999999 5888888999999887 799999
Q ss_pred EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc------ceechHhhhcCc
Q 018075 227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPAAAREV 300 (361)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~ 300 (361)
++++.. ..++.+.+++. .+.++|++||++|+. .++.++++++++|+++.+|...... .+....++.+++
T Consensus 208 vi~~~~-~~~~~~~i~~~---~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~ 282 (348)
T PLN03154 208 AFNYKE-EPDLDAALKRY---FPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRI 282 (348)
T ss_pred EEECCC-cccHHHHHHHH---CCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccc
Confidence 888642 12455555444 246899999999975 8999999999999999999654321 113345677888
Q ss_pred EEEEeecC------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 301 DVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 301 ~i~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++.|++.. .+.++++++++++|++ ++.+...|+| +++++|++.+++++..||+|+++
T Consensus 283 ~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 283 RMQGFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred eEEEEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 99887653 3457789999999999 5556677888 99999999999999999999874
No 67
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.5e-39 Score=296.96 Aligned_cols=331 Identities=37% Similarity=0.656 Sum_probs=275.3
Q ss_pred ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
|++.++.+++.+++++.+.|++.++||+|||+++++|+.|+....|... ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence 3566777778899999999999999999999999999999988776432 236789999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~ 174 (361)
||+|++.+...|+.|.++..+++++|+.+..++. ...|+|++|+.++.+.++++|+++++.+|+.+.++.+++++++..
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 155 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL 155 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence 9999998888999999999999999998764432 247999999999999999999999999988667778888888668
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
++++|+++||+|+|.+|++++++|+..|+++++++++++++.+.++++|++.++++.. .++... + ...+.++|+
T Consensus 156 ~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~---~~~~~~vd~ 229 (334)
T cd08234 156 GIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-K---EDNPYGFDV 229 (334)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH-H---HhcCCCCcE
Confidence 8999999999998999999999999999965888888999999999999887666433 233222 1 223578999
Q ss_pred EEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEE
Q 018075 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITH 332 (361)
Q Consensus 255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~ 332 (361)
+||+++........+++|+++|+++.+|..... ..+....+..+++++.+.......++.++++++++++.+.+.+.+
T Consensus 230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 309 (334)
T cd08234 230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH 309 (334)
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence 999998766889999999999999999865432 222223344577888887666677899999999999865555678
Q ss_pred EecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 333 RFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
++++ ++++++++.+.+ ...+|+|+
T Consensus 310 ~~~~--~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 310 RLPL--EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EecH--HHHHHHHHHHhc-CCceEEEe
Confidence 8888 999999999998 78889886
No 68
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=6.5e-39 Score=296.47 Aligned_cols=334 Identities=31% Similarity=0.505 Sum_probs=274.0
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
++.++.++ .++++++.+.|.+.+++|+||+.++++|+.|+....|.... ...|.++|+|++|+|+++|+++..+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred eeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCCC
Confidence 44444443 35899999999999999999999999999999887765421 355889999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHHHH
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
||+|++.+...|++|.+|..|+.++|+++...+ ....|+|++|+.++.. .++++|+++++++++.+ ..+.+||+++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 157 (345)
T cd08260 79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPG-FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157 (345)
T ss_pred CCEEEECCCCCCCCCccccCcCcccCCCCcccc-cCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence 999998666789999999999999999874333 2247999999999974 89999999999888755 4788999998
Q ss_pred H-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 172 R-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 172 ~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
. ..+++++++++|+|+|++|++++++|+..|+ .++++++++++.+.++++|++.++++.. ..++...+..+. +.
T Consensus 158 ~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~---~~ 232 (345)
T cd08260 158 VHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT---GG 232 (345)
T ss_pred HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---CC
Confidence 5 4789999999999999999999999999999 5788888899999999999988877532 134444444432 33
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC---cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCC
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV 326 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~ 326 (361)
++|++||++|+.......+++|+++|+++.+|..... ..+....+..+++++.+.... .+.++.++++++++++.+
T Consensus 233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~ 312 (345)
T cd08260 233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP 312 (345)
T ss_pred CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence 8999999999766889999999999999999865432 233344455778888887554 567889999999999865
Q ss_pred CCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.+.+.+.+++ +++++|++.+.++...+|+|++
T Consensus 313 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 313 EPLVGRTISL--DEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred hhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence 5446688888 9999999999999999999875
No 69
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-39 Score=297.03 Aligned_cols=326 Identities=26% Similarity=0.428 Sum_probs=269.1
Q ss_pred ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 15 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
|+++++.+++. ++++++|.|.+.++|++|++.++++|++|+....|.... .++|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCccCC
Confidence 35666667765 999999999999999999999999999999877664321 25578999999999999999998899
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR 172 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~ 172 (361)
+||+|++.+..+|+.|.+|+.|.+.+|+...+++. ...|+|++|+.++.+.++++|+++++.+++.+. .+.+||++++
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~ 156 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR 156 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence 99999998778999999999999999999776653 357999999999999999999999998888554 7788999887
Q ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075 173 RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
...+++++++||+|+ |++|++++++|+.+|+ .++.+++++++.+.++++ ++.++++. ++.+.+.+ . .+
T Consensus 157 ~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~---~--~~ 225 (334)
T PRK13771 157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKK---I--GG 225 (334)
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHh---c--CC
Confidence 668899999999995 9999999999999999 578888888899988888 66554421 33333332 2 27
Q ss_pred ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc--ceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCC
Q 018075 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKP 328 (361)
Q Consensus 252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~ 328 (361)
+|++||++|+. ....++++|+++|+++.+|...... .........++.++.+.... .++++.++++++++.+ ++
T Consensus 226 ~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~ 302 (334)
T PRK13771 226 ADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKI--KP 302 (334)
T ss_pred CcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCC--cc
Confidence 99999999976 7899999999999999998654321 23333445677888876543 5678899999999998 45
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.+.+.+++ +++++|++.+.++...+|++++
T Consensus 303 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 332 (334)
T PRK13771 303 VIGAEVSL--SEIDKALEELKDKSRIGKILVK 332 (334)
T ss_pred eEeeeEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence 57788888 9999999999998888999886
No 70
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.6e-38 Score=293.43 Aligned_cols=333 Identities=28% Similarity=0.459 Sum_probs=274.8
Q ss_pred eEEEEeeCC--ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 16 MAAWLLGIK--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 16 ~~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
++.++.+++ .+++++++.|.+.++|++|||.++++|++|+....|.... ....|.++|+|++|+|+++|++++.++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 2 KAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred ceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc--CCCCCccCCcccceEEEEeCCCCCCCC
Confidence 455665555 8999999999999999999999999999999887664321 134577899999999999999999999
Q ss_pred CCCEEEecC-CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 94 VGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 94 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
+||+|++.+ ...|+.|.++..++..+|+....++. ...|+|++|+.++.+.++++|+++++.+++.+ ..+.+||+++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~ 158 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL 158 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHH
Confidence 999999876 46799999999999999998766654 34789999999999999999999999988854 5788899998
Q ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 172 RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+..++++++++||+|+ +.+|++++++|+.+|+ .++.++.++++.+.++++|++.++++.. .++.+.+.+.. .++
T Consensus 159 ~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~~~ 233 (341)
T cd08297 159 KKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--GGG 233 (341)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--cCC
Confidence 7778999999999995 6799999999999999 6888888889999999999988777543 24444444332 357
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCC
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKP 328 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~ 328 (361)
++|++||+.++.......+++++++|+++.+|...... ++....+..++.++.+.... .++++.++++++++.+. +
T Consensus 234 ~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~ 311 (341)
T cd08297 234 GAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK--P 311 (341)
T ss_pred CCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc--c
Confidence 89999997776778999999999999999998655322 33334456788888875543 47789999999999984 3
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.+ ..|++ ++++++++.+.++...||+++++
T Consensus 312 ~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 312 HI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 34 56788 99999999999999999999986
No 71
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=5.3e-39 Score=297.05 Aligned_cols=298 Identities=18% Similarity=0.239 Sum_probs=227.3
Q ss_pred CceEEEEecCCCCC-CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075 24 KTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP 102 (361)
Q Consensus 24 ~~l~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 102 (361)
+.+++++.|.|+|. ++||||||+|+|||+.|...............+|+++|+|++|+|+++|+++++|++||+|++.
T Consensus 21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~- 99 (345)
T cd08293 21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF- 99 (345)
T ss_pred cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec-
Confidence 57999999999874 9999999999999999964332110001123567899999999999999999999999999851
Q ss_pred CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccc-----ccccchhHHHHHHHHh-cCC
Q 018075 103 GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRR-ANV 176 (361)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~-----aa~~~~~~~a~~~l~~-~~~ 176 (361)
.++|+||++++++.++++|+++++.+ +++..++.+||+++.. +++
T Consensus 100 -----------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~ 150 (345)
T cd08293 100 -----------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI 150 (345)
T ss_pred -----------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC
Confidence 25799999999999999999864432 3344578899999854 778
Q ss_pred CCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 177 GPE--TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 177 ~~g--~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
++| ++|||+|+ |++|++++|+|+.+|+..|+++++++++.+.+++ +|++.++++.. .++.+.++++ .++++
T Consensus 151 ~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~---~~~gv 225 (345)
T cd08293 151 TPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLREL---CPEGV 225 (345)
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHH---CCCCc
Confidence 877 99999995 9999999999999998568888888999888876 99999887543 4666666554 24689
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC---Ccc----eec--hHhh-hcCcEEEEeec--C----CCcHHHHH
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT---EMT----VAL--TPAA-AREVDVIGIFR--Y----RSTWPLCI 316 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~----~~~--~~~~-~~~~~i~~~~~--~----~~~~~~~~ 316 (361)
|++||++|+. .+..++++|+++|+++.+|.... ... +.. ..+. .+++....+.. . .+.+++++
T Consensus 226 d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (345)
T cd08293 226 DVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLS 304 (345)
T ss_pred eEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHH
Confidence 9999999987 78999999999999999984321 111 110 1111 22333333221 1 23467788
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 317 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+++++|++++ .....+++ +++++|++.+.+++..||+|+++
T Consensus 305 ~l~~~g~i~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 305 QWVKEGKLKV--KETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHCCCccc--eeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence 9999999943 34445677 99999999999998899999875
No 72
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.2e-38 Score=292.00 Aligned_cols=333 Identities=32% Similarity=0.563 Sum_probs=275.4
Q ss_pred ceEEEEeeCC-c-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 15 NMAAWLLGIK-T-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 15 ~~~~~~~~~~-~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
|++.++..++ . +.+.+.+.|.+.+++|+|++.++++|+.|+....|... .....|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~~~~g~~~~G~v~~~G~~v~~~ 78 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP--TLTKLPLTLGHEIAGTVVEVGAGVTNF 78 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc--ccCCCCEeccccccEEEEEECCCCccC
Confidence 3555666543 3 58888889999999999999999999999988776542 123457799999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
++||+|++.+..+|+.|.+|+.++..+|.+..+.+. ...|+|++|+.++.+.++++|+++++++++.+ .++.+||+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l 157 (338)
T cd08254 79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV 157 (338)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 999999999888999999999999999976544432 45799999999999999999999999888855 6889999998
Q ss_pred Hh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 172 RR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 172 ~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
.. .+++++++|||.|+|++|++++++|+..|+ .+++++.++++.+.++++|++.++.... ......+ ....+.
T Consensus 158 ~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~---~~~~~~ 231 (338)
T cd08254 158 VRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK---AAGLGG 231 (338)
T ss_pred HhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH---HHhcCC
Confidence 65 679999999999889999999999999999 5888889999999999999987766432 3333333 222467
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL 329 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 329 (361)
++|++||++|....++.++++|+++|+++.+|.......+....+..++.++.+.+.. .+.+..++++++++.+.+.
T Consensus 232 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-- 309 (338)
T cd08254 232 GFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ-- 309 (338)
T ss_pred CceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc--
Confidence 8999999998777899999999999999999876544444555667788888876554 5678899999999998543
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.+.+++ ++++++++.+.+++..+|+|++.
T Consensus 310 -~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 310 -VETRPL--DEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 467888 99999999999999999999864
No 73
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.9e-39 Score=290.96 Aligned_cols=260 Identities=24% Similarity=0.424 Sum_probs=220.1
Q ss_pred ccCcceeEEEEEeCCCCC------CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC------CCCCceeEEEE
Q 018075 73 VIGHECAGIIEEVGSEVK------SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVV 140 (361)
Q Consensus 73 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~ 140 (361)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|.+|+.|+++.|++..+++.. ..+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 899999999998889999999999999999987766531 24699999999
Q ss_pred ecCC-ceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH
Q 018075 141 HPAK-LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 218 (361)
Q Consensus 141 ~~~~-~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~ 218 (361)
+++. .++++|+++++++|+.+. .+.++|+++++....+|++|||+|+|++|++++|+||.+|+++|++++.+++|.++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 9997 799999999999888664 66888999987777899999999999999999999999999768888889999999
Q ss_pred HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC--CCcceechHhh
Q 018075 219 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAA 296 (361)
Q Consensus 219 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~ 296 (361)
++++|++.+++.. +..+.+.++. .+.++|++||++|.+..++.++++++++|+++.+|... ...+++...++
T Consensus 161 a~~~Ga~~~i~~~----~~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~ 234 (280)
T TIGR03366 161 ALSFGATALAEPE----VLAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV 234 (280)
T ss_pred HHHcCCcEecCch----hhHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence 9999998877642 1223333332 35689999999998878999999999999999999643 23355667788
Q ss_pred hcCcEEEEeecC-CCcHHHHHHHHHcC--CCCCCCceEEEecCChhh
Q 018075 297 AREVDVIGIFRY-RSTWPLCIEFLRSG--KIDVKPLITHRFGFTQKE 340 (361)
Q Consensus 297 ~~~~~i~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~ 340 (361)
.+++++.|+..+ .++++++++++.++ ++++.+.++++|+| ++
T Consensus 235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~ 279 (280)
T TIGR03366 235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD 279 (280)
T ss_pred hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence 999999998776 56899999999985 56666788888888 65
No 74
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1e-38 Score=268.61 Aligned_cols=314 Identities=18% Similarity=0.237 Sum_probs=245.8
Q ss_pred ccCCcccceEEEEe---eC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEE
Q 018075 8 DEGDKNQNMAAWLL---GI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83 (361)
Q Consensus 8 ~~~~~~~~~~~~~~---~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~ 83 (361)
..+|+...++.++. +| +.++++++++|+.+.++|+||..|+.|||+|+..++|.++ ..+++|.+.|+|++|+|+
T Consensus 13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYp--vrP~~PAVgGnEGv~eVv 90 (354)
T KOG0025|consen 13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYP--VRPELPAVGGNEGVGEVV 90 (354)
T ss_pred ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccC--CCCCCCcccCCcceEEEE
Confidence 34455555666555 23 6799999999998888899999999999999999999763 336789999999999999
Q ss_pred EeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-
Q 018075 84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE- 162 (361)
Q Consensus 84 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~- 162 (361)
.+|+++++|++||+|+.. ....|+|++|.+.+++.++++++.++++.||++.
T Consensus 91 ~vGs~vkgfk~Gd~VIp~---------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~V 143 (354)
T KOG0025|consen 91 AVGSNVKGFKPGDWVIPL---------------------------SANLGTWRTEAVFSESDLIKVDKDIPLASAATLSV 143 (354)
T ss_pred EecCCcCccCCCCeEeec---------------------------CCCCccceeeEeecccceEEcCCcCChhhhheecc
Confidence 999999999999999863 3357999999999999999999999999999875
Q ss_pred hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChh---HHHHHHHcCCCEEeecCCCccch
Q 018075 163 PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDV 237 (361)
Q Consensus 163 ~~~~a~~~l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~ 237 (361)
..+|||.+|++ -++++||+|.-.|+ +++|++.||+||+.|...+=++...++ -.+.++.+||++++-..+- .+
T Consensus 144 NP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~- 221 (354)
T KOG0025|consen 144 NPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RD- 221 (354)
T ss_pred CchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cc-
Confidence 67889999987 88999999888885 999999999999999965555533332 2344566899998752211 01
Q ss_pred hHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc-cCCCCcceechHhhhcCcEEEEeecC--------
Q 018075 238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIFRY-------- 308 (361)
Q Consensus 238 ~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~-------- 308 (361)
.+..+. .....++.+.|||+|+. ....+.+.|..||.++.+| ++-.+.+++.+.++|+.+.++|+|..
T Consensus 222 ~~~~k~--~~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~ 298 (354)
T KOG0025|consen 222 RKMKKF--KGDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKS 298 (354)
T ss_pred hhhhhh--hccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCC
Confidence 111111 11245789999999988 7889999999999999998 66677788899999999999999864
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHh-cCCCceEEEE
Q 018075 309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA-QGGNAIKVMF 359 (361)
Q Consensus 309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~-~~~~~gkvvi 359 (361)
.+.+.++.++++.|++.... .+..+| ++...|++... .-...||-+|
T Consensus 299 pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L--~~~~tald~~L~~~~~~~Kq~i 350 (354)
T KOG0025|consen 299 PEERKEMIDELCDLYRRGKLKAPN--CEKVPL--ADHKTALDAALSKFGKSGKQII 350 (354)
T ss_pred cHHHHHHHHHHHHHHHcCeecccc--ceeeec--hhhhHHHHHHHHHhccCCceEE
Confidence 13467899999999995443 334567 77777777533 3333345544
No 75
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.7e-38 Score=292.80 Aligned_cols=295 Identities=19% Similarity=0.208 Sum_probs=235.7
Q ss_pred CceEEEEecC----CCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcce--eEEEEEeCCCCCCCCCCCE
Q 018075 24 KTLKIQPYHL----PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHEC--AGIIEEVGSEVKSLEVGDR 97 (361)
Q Consensus 24 ~~l~~~~~~~----p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~ 97 (361)
+.|++++.++ |+|+++||||||+|+|+|+.|++...|.... ....|+++|+++ .|++..+|+++++|++||+
T Consensus 19 ~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~ 96 (338)
T cd08295 19 SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDL 96 (338)
T ss_pred cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCE
Confidence 5799999877 8899999999999999999999988764211 124578899754 4566668899999999999
Q ss_pred EEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecC-CceEECC-CCCCcc-ccc-ccchhHHHHHHHHh
Q 018075 98 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLP-DNVSLE-EGA-MCEPLSVGVHACRR 173 (361)
Q Consensus 98 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~vP-~~~~~~-~aa-~~~~~~~a~~~l~~ 173 (361)
|+. .|+|+||+++++ ..++++| +++++. +++ +..++.+||+++..
T Consensus 97 V~~-------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~ 145 (338)
T cd08295 97 VWG-------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYE 145 (338)
T ss_pred EEe-------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHH
Confidence 985 368999999999 7999995 568875 565 44588999999865
Q ss_pred -cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 174 -ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 174 -~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
.++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|++.++++.. ..++.+.+.+. .+.
T Consensus 146 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~---~~~ 220 (338)
T cd08295 146 VCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRY---FPN 220 (338)
T ss_pred hcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHh---CCC
Confidence 88999999999995 9999999999999999 58888888999999988 99998887532 23555555443 246
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc------ceechHhhhcCcEEEEeecC------CCcHHHHHHH
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPAAAREVDVIGIFRY------RSTWPLCIEF 318 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~ 318 (361)
++|++||++|+. .+..++++|+++|+++.+|...... ..+...+.++++++.++... .+.+++++++
T Consensus 221 gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l 299 (338)
T cd08295 221 GIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGY 299 (338)
T ss_pred CcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHH
Confidence 899999999975 8999999999999999998543311 12234566778888875432 2347788999
Q ss_pred HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+++|++++ .+...|++ +++++|++.+.+++..||+|+++
T Consensus 300 ~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 300 IKEGKLKY--VEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHCCCeEc--eeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence 99999944 34455778 99999999999998999999975
No 76
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.7e-38 Score=291.24 Aligned_cols=289 Identities=19% Similarity=0.227 Sum_probs=232.0
Q ss_pred eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEec
Q 018075 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALE 101 (361)
Q Consensus 22 ~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 101 (361)
+++.+++++.|.|+|++|||||||.|+|+|+.+.. |... ....|.++|.|++|+|+++|+ .|++||||++
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~- 84 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPKGTIVLA- 84 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCCCCEEEE-
Confidence 45779999999999999999999999999997654 3211 123478999999999999874 5999999985
Q ss_pred CCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEEC----CCCCCcccc-cc-cchhHHHHHHHH-hc
Q 018075 102 PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL----PDNVSLEEG-AM-CEPLSVGVHACR-RA 174 (361)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v----P~~~~~~~a-a~-~~~~~~a~~~l~-~~ 174 (361)
.++|++|+.++.+.+.++ |+++++++| +. ..++.|||+++. .+
T Consensus 85 ------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~ 134 (325)
T TIGR02825 85 ------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC 134 (325)
T ss_pred ------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence 246999999999988888 899999886 44 457899999984 58
Q ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 175 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 175 ~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++++|++|||+| +|++|++++|+||..|+ .++++++++++.++++++|++.++++... .++.+.++.. .++++|
T Consensus 135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvd 209 (325)
T TIGR02825 135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYD 209 (325)
T ss_pred CCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeE
Confidence 899999999998 69999999999999999 68888889999999999999998876431 2344444333 356899
Q ss_pred EEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-----Ccc--eechHhhhcCcEEEEeecC-------CCcHHHHHHHH
Q 018075 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-----EMT--VALTPAAAREVDVIGIFRY-------RSTWPLCIEFL 319 (361)
Q Consensus 254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l 319 (361)
++||++|++ .++.++++|+++|+++.+|.... ... .....+.++.+++.++... .+.++++++++
T Consensus 210 vv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 288 (325)
T TIGR02825 210 CYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWV 288 (325)
T ss_pred EEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHH
Confidence 999999976 78999999999999999985432 111 1233466778888876532 24678899999
Q ss_pred HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++|++.+. ....|+| +++++|++.+++++..||+|++
T Consensus 289 ~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 289 LEGKIQYK--EYVIEGF--ENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HCCCcccc--eeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence 99999543 4456788 9999999999999999999974
No 77
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.3e-37 Score=286.15 Aligned_cols=326 Identities=33% Similarity=0.534 Sum_probs=267.2
Q ss_pred eEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~-~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
++.++.. ++.+.++++|.|.+.+++|+|+|+++++|++|++...|.... ...|.++|+|++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 2 KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred eEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCCC
Confidence 4555554 578999999999999999999999999999999887764321 245789999999999999999999999
Q ss_pred CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh
Q 018075 95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR 173 (361)
Q Consensus 95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~ 173 (361)
||+|++.+...|+.|.+|..+.+..|+....++ ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++.
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~ 157 (332)
T cd08259 79 GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR 157 (332)
T ss_pred CCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence 999999888899999999999999999864444 345799999999999999999999999888755 578889999877
Q ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 174 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 174 ~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
..+++++++||+| +|++|++++++++..|+ .++.+.+++++.+.+++++.+.+++.. ++.+.+.+. .++
T Consensus 158 ~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~ 227 (332)
T cd08259 158 AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----GGA 227 (332)
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc-----cCC
Confidence 8899999999998 59999999999999999 567777888888888889987665432 133333322 279
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI 330 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 330 (361)
|++++++|.. .....+++++++|+++.++....... +.......++..+.+.... .++++++++++++|.+ .+.+
T Consensus 228 d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~ 304 (332)
T cd08259 228 DVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI--KPVI 304 (332)
T ss_pred CEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC--ccce
Confidence 9999999976 78899999999999999986543211 2233344567777766543 5678889999999998 4557
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 331 THRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.+.+++ +++++|++.+.+++..+|++++
T Consensus 305 ~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 305 DRVVSL--EDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred eEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence 788888 9999999999999888999875
No 78
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.1e-37 Score=286.45 Aligned_cols=319 Identities=25% Similarity=0.390 Sum_probs=262.3
Q ss_pred eEEEEeeCC-----ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075 16 MAAWLLGIK-----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90 (361)
Q Consensus 16 ~~~~~~~~~-----~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 90 (361)
++.++.+++ .+++++.+.|.+.++||+||+.++++|++|+....|.... ...|.++|+|++|+|+++|+++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~ 78 (329)
T cd08298 2 KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGVT 78 (329)
T ss_pred eEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCCC
Confidence 445555554 6889999888899999999999999999999887764321 35578999999999999999999
Q ss_pred CCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHH
Q 018075 91 SLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGV 168 (361)
Q Consensus 91 ~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~ 168 (361)
++++||+|++.+. .+|+.|.+|+.+.+++|+.+.+++. ...|+|++|+.++.+.++++|+++++.+++.+ .++.+||
T Consensus 79 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~ 157 (329)
T cd08298 79 RFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY 157 (329)
T ss_pred CCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence 9999999987544 5789999999999999999887764 34799999999999999999999999888744 5788899
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
++++.+++++++++||+|+|++|++++++++..|+ .++.++.++++.+.++++|++..++.... .
T Consensus 158 ~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------------~ 222 (329)
T cd08298 158 RALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL--------------P 222 (329)
T ss_pred HHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc--------------C
Confidence 99966899999999999999999999999999999 67888888899999999999776654221 1
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCC
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV 326 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~ 326 (361)
+.++|+++++.+...+++.++++|+++|+++.+|...... .++.. ....+..+.+.... .+.++.++++++++.+.
T Consensus 223 ~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~- 300 (329)
T cd08298 223 PEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIK- 300 (329)
T ss_pred CCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCC-
Confidence 3579999998766678999999999999999988543211 11222 23456667666544 45688899999999884
Q ss_pred CCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
+. .+.|++ +++++|++.+++++..||+++
T Consensus 301 -~~-~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 301 -PE-VETYPL--EEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred -ce-EEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence 33 578888 999999999999999999874
No 79
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.1e-37 Score=285.78 Aligned_cols=305 Identities=23% Similarity=0.265 Sum_probs=246.0
Q ss_pred eEEEEeeCC----ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 16 MAAWLLGIK----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 16 ~~~~~~~~~----~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
+++++.+++ .++++++|.|.+.++||+|||.++++|++|++...|.... ....|.++|||++|+|+++|++++.
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~ 79 (324)
T cd08292 2 RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVKG 79 (324)
T ss_pred eeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCCC
Confidence 455555443 4889999999999999999999999999999888765321 1345789999999999999999999
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHH
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA 170 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~ 170 (361)
+++||+|++. ...|+|++|+.+++..++++|+++++++++.+. ...+||++
T Consensus 80 ~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 131 (324)
T cd08292 80 LQVGQRVAVA----------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALML 131 (324)
T ss_pred CCCCCEEEec----------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHH
Confidence 9999999863 126899999999999999999999999888653 56778888
Q ss_pred HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 171 CRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
++..++++|++|||+| +|.+|++++|+|+.+|+ .++.+..++++.+.++++|++.+++.. ..++.+.+.++. .+
T Consensus 132 ~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~~ 206 (324)
T cd08292 132 LDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTE--QPGWQDKVREAA--GG 206 (324)
T ss_pred HHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCC--CchHHHHHHHHh--CC
Confidence 8778899999999998 59999999999999999 566666777777777889988777643 345555555443 45
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-----------CCcHHHHHH
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-----------RSTWPLCIE 317 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~ 317 (361)
.++|++||++|+. .....+++|+++|+++.+|.... ...+.......++.++.++... .+.+.++++
T Consensus 207 ~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (324)
T cd08292 207 APISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLT 285 (324)
T ss_pred CCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHH
Confidence 7899999999986 78999999999999999986532 2233344456788888887643 235788999
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++++|.+.+ .+.+.|++ +++++|++.+.++...+|++++
T Consensus 286 l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 286 LALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence 999999953 34677888 9999999999988888999874
No 80
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=7.6e-38 Score=287.42 Aligned_cols=287 Identities=21% Similarity=0.259 Sum_probs=231.0
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
+.+++++.+.|+|+++||+|||+++|+|+.|..... .....|.++|+|++|+|++ .+++|++||||+.
T Consensus 19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~------~~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~--- 86 (329)
T cd08294 19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK------RLNEGDTMIGTQVAKVIES---KNSKFPVGTIVVA--- 86 (329)
T ss_pred cceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc------cCCCCCcEecceEEEEEec---CCCCCCCCCEEEe---
Confidence 568999999999999999999999999988765221 1124588999999999995 4567999999985
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC---ceEECCCCCC------cccccccchhHHHHHHHH-h
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK---LCYKLPDNVS------LEEGAMCEPLSVGVHACR-R 173 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~vP~~~~------~~~aa~~~~~~~a~~~l~-~ 173 (361)
.++|++|+.++.+ .++++|++++ ...++...++.+||+++. .
T Consensus 87 ----------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~ 138 (329)
T cd08294 87 ----------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEI 138 (329)
T ss_pred ----------------------------eCCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHh
Confidence 3579999999999 9999999988 222334468899999985 4
Q ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 174 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 174 ~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.++++|++|||+| +|++|++++|+|+..|+ .++++++++++.++++++|++.++++.. .++.+.++++ .++++
T Consensus 139 ~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--~~~~~~v~~~---~~~gv 212 (329)
T cd08294 139 CKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--VSLEEALKEA---APDGI 212 (329)
T ss_pred cCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHH---CCCCc
Confidence 8899999999998 69999999999999999 5888889999999999999999887543 4555555443 34689
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--c-----ceechHhhhcCcEEEEeecC------CCcHHHHHHHH
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--M-----TVALTPAAAREVDVIGIFRY------RSTWPLCIEFL 319 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~-----~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l 319 (361)
|++||++|+. .+..++++++++|+++.+|..... . ......+.++++++.++... .+.++++++++
T Consensus 213 d~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 291 (329)
T cd08294 213 DCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWI 291 (329)
T ss_pred EEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHH
Confidence 9999999975 899999999999999999853211 0 12233567788888886543 23467889999
Q ss_pred HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++|.+++. ....+++ +++++|++.+.+++..||+|+++
T Consensus 292 ~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 292 KEGKLKYR--EHVTEGF--ENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HCCCCcCC--cccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence 99999543 3345778 99999999999999999999875
No 81
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.3e-36 Score=280.19 Aligned_cols=333 Identities=28% Similarity=0.459 Sum_probs=269.9
Q ss_pred eEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++. .+..+++++.+.|++.+++|+|++.++++|++|+....|... .....|.++|||++|+|+++|++++.+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (342)
T cd08266 2 KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG--IKLPLPHILGSDGAGVVEAVGPGVTNV 79 (342)
T ss_pred eEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC--CCCCCCeecccceEEEEEEeCCCCCCC
Confidence 455666 446788989888889999999999999999999988776432 113457899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l 171 (361)
++||+|++.+..+|+.|.+|..+.++.|+...+++. ...|+|++|+.++.+.++++|+++++++++.+. .+.+|++++
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l 158 (342)
T cd08266 80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHML 158 (342)
T ss_pred CCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHH
Confidence 999999999999999999999999999998766553 357899999999999999999999998887654 678888887
Q ss_pred H-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 R-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
. ..+++++++++|+|+ +++|++++++++..|+ .++.++.++++.+.+++++.+.+++. ...++.+.+.+.. .+
T Consensus 159 ~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~ 233 (342)
T cd08266 159 VTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRELT--GK 233 (342)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHHHh--CC
Confidence 5 488999999999985 7999999999999999 57778888888888888887766543 2233434433322 24
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 327 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~ 327 (361)
.++|++++++|.. .+...+++++++|+++.++..... ........+.++.++.+.... ...+..++++++++.+ .
T Consensus 234 ~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~ 310 (342)
T cd08266 234 RGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKL--K 310 (342)
T ss_pred CCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCc--c
Confidence 5799999999975 889999999999999999855432 222333445677777776554 4578889999999988 4
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.+++.|++ ++++++++.+.++...+|++++.
T Consensus 311 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 311 PVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 557788888 99999999999888889999863
No 82
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=4.7e-37 Score=281.71 Aligned_cols=317 Identities=26% Similarity=0.428 Sum_probs=254.8
Q ss_pred eEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 16 MAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 16 ~~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
++.++.++ +.+++++.+.|+++++||+||+.++++|++|++...+.. ....|.++|||++|+|+++|++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 2 KALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred eeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCCC
Confidence 44555443 578899998888999999999999999999998765321 123477899999999999999999999
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR 172 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~ 172 (361)
+||+|++.+...|++|.+|+.|+.++|++..+.+. ...|+|++|+.++++.++++|+++++++++.+. .+.+||++++
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~ 156 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK 156 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 99999998888999999999999999998766543 357999999999999999999999998888554 6788999987
Q ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075 173 RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
..++++|++|+|+|+ |++|++++++|+.+|++ ++.++ +.+.++++|++.+++.. +..+.+.++ . ++
T Consensus 157 ~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~---~-~~ 223 (325)
T cd08264 157 TAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEI---T-KM 223 (325)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecch----HHHHHHHHH---h-CC
Confidence 788999999999995 99999999999999995 66664 23677889988776532 122333333 2 67
Q ss_pred ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL 329 (361)
Q Consensus 252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 329 (361)
+|++||++|+. .++..+++|+++|+++.+|.... ...++...+..++.++.+...+ ++.++.+++++...+ ..
T Consensus 224 ~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~ 298 (325)
T cd08264 224 ADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK----VK 298 (325)
T ss_pred CCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC----ce
Confidence 99999999975 89999999999999999986422 2344455566677788776544 567888999996433 33
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEE
Q 018075 330 ITHRFGFTQKEIEDAFEISAQGGNAIKV 357 (361)
Q Consensus 330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkv 357 (361)
+.+.|++ +++++|++.+.++...+|+
T Consensus 299 ~~~~~~~--~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 299 VWKTFKL--EEAKEALKELFSKERDGRI 324 (325)
T ss_pred eEEEEcH--HHHHHHHHHHHcCCCcccc
Confidence 5677888 9999999999988777775
No 83
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-36 Score=282.06 Aligned_cols=323 Identities=24% Similarity=0.342 Sum_probs=250.9
Q ss_pred eEEEEeeC---CceEEEE-ecCCCCCCCcEEEEEeeeecCcchhhhhcccccc-----------------cccCCCCccc
Q 018075 16 MAAWLLGI---KTLKIQP-YHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA-----------------NFIVKKPMVI 74 (361)
Q Consensus 16 ~~~~~~~~---~~l~~~~-~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-----------------~~~~~~p~~~ 74 (361)
+++++.++ +.+.+.+ .+.|.+.+++|+|||.++++|++|++...|.... ....+.|.++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (350)
T cd08274 2 RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQ 81 (350)
T ss_pred eEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCccc
Confidence 44555543 3566654 5777789999999999999999999887664310 0123568899
Q ss_pred CcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCC
Q 018075 75 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS 154 (361)
Q Consensus 75 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~ 154 (361)
|||++|+|+++|+++++|++||+|++.+...|+.|..|. .+.+.+. ..+|+|++|+.++.+.++++|++++
T Consensus 82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~--------~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~ 152 (350)
T cd08274 82 GADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA--------DIDYIGS-ERDGGFAEYTVVPAENAYPVNSPLS 152 (350)
T ss_pred CCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc--------cccccCC-CCCccceEEEEecHHHceeCCCCCC
Confidence 999999999999999999999999987766666665432 1222221 2369999999999999999999999
Q ss_pred ccccccc-chhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075 155 LEEGAMC-EPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232 (361)
Q Consensus 155 ~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~ 232 (361)
+.+++.+ .++.+||++++..++++|++|||+|+ |++|++++++|+.+|++ ++.++.++ +.+.++++|++.+.+.
T Consensus 153 ~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~-- 228 (350)
T cd08274 153 DVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR-- 228 (350)
T ss_pred HHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC--
Confidence 9887755 57888999887788999999999995 99999999999999995 66666555 7888899998754432
Q ss_pred CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CC
Q 018075 233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RS 310 (361)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~ 310 (361)
......+ . ..+.+.++|++||++|+. .++.++++++++|+++.+|..... ..++...++.++.++.++... .+
T Consensus 229 ~~~~~~~-~---~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (350)
T cd08274 229 DAPLLAD-A---KALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTRE 303 (350)
T ss_pred CCccHHH-H---HhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHH
Confidence 2222222 1 222467899999999975 899999999999999999855332 234444556788888887665 56
Q ss_pred cHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 311 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 311 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.+.+++++++++++ .+.+.+.+++ ++++++++.+.++...+|++++
T Consensus 304 ~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 304 VFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred HHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEe
Confidence 78899999999998 4456677888 9999999999998889999986
No 84
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3.3e-36 Score=276.69 Aligned_cols=325 Identities=28% Similarity=0.438 Sum_probs=266.1
Q ss_pred eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (361)
+++++.++ +.+.+++.|.|.+.+++|+|++.++++|++|+....|.... ...|.++|+|++|+|+++|++++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG---SKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC---CCCCcccCccceEEEEEECCCCccccc
Confidence 35666666 68999999999999999999999999999999887765421 345789999999999999999999999
Q ss_pred CCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH
Q 018075 95 GDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR 172 (361)
Q Consensus 95 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~ 172 (361)
||+|+..+. .+|+.|.+|..+.+++|++.-+.+. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~ 156 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR 156 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999987554 5799999999999999998654442 24689999999999999999999999988854 56788999887
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
...++++++|||+|+|++|++++++|+..|. .++++++++++.+.++++|++.+++... .+.... ...++
T Consensus 157 ~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-------~~~~~ 226 (330)
T cd08245 157 DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQA-------AAGGA 226 (330)
T ss_pred hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHHh-------ccCCC
Confidence 7889999999999988899999999999999 5788888899999999999887765432 122111 13579
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI 330 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 330 (361)
|+++|+++.......++++|+++|+++.++....... .....+..++.++.+.... ...++.++++++++.+. + .
T Consensus 227 d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~-~ 303 (330)
T cd08245 227 DVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK--P-M 303 (330)
T ss_pred CEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc--c-e
Confidence 9999998876688999999999999999986433212 2133466777888777654 56788899999999984 3 3
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 331 THRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
.+.+++ ++++++++.+.+++..+|+|+
T Consensus 304 ~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 304 IETFPL--DQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred EEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence 467888 999999999999988899875
No 85
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.3e-36 Score=274.55 Aligned_cols=297 Identities=35% Similarity=0.650 Sum_probs=244.8
Q ss_pred eEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 16 MAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 16 ~~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
+++++.++ +.+++++++.|++.+++|+|||.++++|++|++...+... ....|.++|+|++|+|+++|++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 2 KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred eeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcCC
Confidence 44555533 5699999999999999999999999999999988766431 134578999999999999999999999
Q ss_pred CCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075 94 VGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR 172 (361)
Q Consensus 94 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~ 172 (361)
+||+|++.+. .+|+.|.+|..+....|+.-..++ ....|+|++|+.++.+.++++|+++++++|+.+.++.+||+++.
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l~ 157 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVA 157 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHHH
Confidence 9999999764 589999999999999998754443 23569999999999999999999999998886678888999985
Q ss_pred h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE--eCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 173 R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 173 ~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
. .++++|++|||.|+|.+|++++++|+.+|++ ++.+ ++++++.++++++|++.+ ++. ..++.+.+..+. .+
T Consensus 158 ~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~~~l~~~~--~~ 231 (306)
T cd08258 158 ERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NGG--EEDLAELVNEIT--DG 231 (306)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CCC--cCCHHHHHHHHc--CC
Confidence 4 8899999999988899999999999999995 5554 345668889999998766 542 345555554443 35
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 322 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g 322 (361)
.++|++||++|....+...+++|+++|+++.+|... ....+....++++++++.|++.+ .++++++++++++|
T Consensus 232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 689999999987668999999999999999998765 23445566778899999999987 77899999999876
No 86
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.2e-35 Score=270.68 Aligned_cols=300 Identities=30% Similarity=0.451 Sum_probs=243.4
Q ss_pred eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhh-cccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEe
Q 018075 22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVAL 100 (361)
Q Consensus 22 ~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 100 (361)
+++.+++++++.|++.++||+|||.++++|+.|+... .|.... ..+..|.++|+|++|+|+++|++++.+++||+|++
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~-~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWF-VYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCc-ccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 5678999999999999999999999999999998876 553211 11235789999999999999999999999999986
Q ss_pred cCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHhcCCCCC
Q 018075 101 EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPE 179 (361)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g 179 (361)
. ..|+|++|+.++++.++++|+++ ..++.. .++.+++++++..++++|
T Consensus 82 ~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~ 130 (312)
T cd08269 82 L-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAG 130 (312)
T ss_pred e-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCC
Confidence 3 25899999999999999999998 233333 677888888888889999
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 259 (361)
+++||+|+|++|++++++|+.+|++.++++++++++.++++++|++.+++. ...++.+.+.++. .+.++|++|||+
T Consensus 131 ~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~vd~vld~~ 206 (312)
T cd08269 131 KTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAGADVVIEAV 206 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCCCCEEEECC
Confidence 999999989999999999999999647888888889999999999877653 3345555555443 356899999999
Q ss_pred CChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC-----CCcHHHHHHHHHcCCCCCCCceEEE
Q 018075 260 GFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKPLITHR 333 (361)
Q Consensus 260 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~ 333 (361)
|+.......+++|+++|+++.+|... ....+......+++.++.++... .+.++.+++++++|.+.+.....+.
T Consensus 207 g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 286 (312)
T cd08269 207 GHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHE 286 (312)
T ss_pred CCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeee
Confidence 87768899999999999999998653 22233444677888888776543 3578899999999998543345677
Q ss_pred ecCChhhHHHHHHHHhcCCC-ceEEEE
Q 018075 334 FGFTQKEIEDAFEISAQGGN-AIKVMF 359 (361)
Q Consensus 334 ~~l~~~~~~~a~~~l~~~~~-~gkvvi 359 (361)
|++ ++++++++.+.+++. .+|+++
T Consensus 287 ~~~--~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 287 FPL--EELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred ecH--HHHHHHHHHHHhCCCCceEEEe
Confidence 888 999999999999855 688876
No 87
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=4.2e-36 Score=255.42 Aligned_cols=292 Identities=18% Similarity=0.185 Sum_probs=240.2
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeC--CCCCCCCCCCEEEec
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVG--SEVKSLEVGDRVALE 101 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~ 101 (361)
++++++++++|.|+++|||+|+.|.+++|.....++... ....|+-+|-..+|.++... |...+|++||.|+.
T Consensus 25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~----SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~- 99 (340)
T COG2130 25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAP----SYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG- 99 (340)
T ss_pred CCceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCc----ccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe-
Confidence 679999999999999999999999999996554433221 23567777766665544433 45678999999985
Q ss_pred CCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCC---CcccccccchhHHHHHHHHh-cCCC
Q 018075 102 PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV---SLEEGAMCEPLSVGVHACRR-ANVG 177 (361)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~---~~~~aa~~~~~~~a~~~l~~-~~~~ 177 (361)
..+|+||..++.+.+.|++++. ++....+-++..|||.+|.+ +..|
T Consensus 100 ------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk 149 (340)
T COG2130 100 ------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPK 149 (340)
T ss_pred ------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCC
Confidence 5689999999999999998664 33334455799999999876 8999
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
+|++|+|-+ +|++|..+.|+||..|. +||++..+++|.+++++ +|.+.+++|.. +++.+.+.+. .+.|+|+.
T Consensus 150 ~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a---~P~GIDvy 223 (340)
T COG2130 150 AGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA---CPKGIDVY 223 (340)
T ss_pred CCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH---CCCCeEEE
Confidence 999999998 69999999999999999 79999999999999988 99999999876 4787776654 58999999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc--ee-----chHhhhcCcEEEEeecC-------CCcHHHHHHHHHc
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT--VA-----LTPAAAREVDVIGIFRY-------RSTWPLCIEFLRS 321 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~-----~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~ 321 (361)
||++|++ .++..+..|+.++|+..||..+.-+. .+ ...++.++..+.|+... ++.++++.+|+++
T Consensus 224 feNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~ 302 (340)
T COG2130 224 FENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKE 302 (340)
T ss_pred EEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHc
Confidence 9999987 99999999999999999996543211 11 22366778999998762 4678899999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 322 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 322 g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
|+++.+..+ +-+| +.+++|+.-|-+|+.+||.|+++
T Consensus 303 GKi~~~eti--~dGl--EnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 303 GKIQYRETI--VDGL--ENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred CceeeEeee--hhhh--hccHHHHHHHhcCCccceEEEEe
Confidence 999776644 3468 99999999999999999999985
No 88
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.4e-35 Score=270.18 Aligned_cols=310 Identities=24% Similarity=0.307 Sum_probs=246.0
Q ss_pred eEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++.+ +..+++.+.+.|.+.+++|+|+|.++++|+.|+....|..........|.++|+|++|+|+++|++++.+
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~ 81 (324)
T cd08244 2 RAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPA 81 (324)
T ss_pred eEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCC
Confidence 4445554 2467788888888899999999999999999998877643222223557899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
++||+|++.+. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||..+
T Consensus 82 ~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~ 135 (324)
T cd08244 82 WLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLL 135 (324)
T ss_pred CCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHH
Confidence 99999986310 13789999999999999999999999988754 4667776555
Q ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 172 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+..++++++++||+| +|++|++++++|+..|+ .++++++++++.+.++++|++.++++. ..++.+.+.+. ..+.
T Consensus 136 ~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~~~ 210 (324)
T cd08244 136 DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREA--LGGG 210 (324)
T ss_pred HhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHH--cCCC
Confidence 668899999999998 69999999999999999 588888889999999999998776643 23444444333 2356
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-------CCcHHHHHHHHHcC
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSG 322 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~g 322 (361)
++|+++|++|+. ..+.++++|+++|+++.+|...... .++....+.++.++.+.... .+.+++++++++++
T Consensus 211 ~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (324)
T cd08244 211 GVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAG 289 (324)
T ss_pred CceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCC
Confidence 899999999977 7799999999999999998654321 23334456777887776543 24577789999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.+. +.+.+.|++ +++++|++.+.++...+|+++++
T Consensus 290 ~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 290 RLV--PVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred Ccc--CccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 983 446677888 99999999999999999999864
No 89
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.4e-35 Score=273.13 Aligned_cols=298 Identities=19% Similarity=0.286 Sum_probs=234.3
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075 23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP 102 (361)
Q Consensus 23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 102 (361)
++.+++.++|.|+++++||+|||.++++|+.|+....+... ....|.++|+|++|+|+++|++++.|++||+|++..
T Consensus 14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 90 (336)
T TIGR02817 14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG 90 (336)
T ss_pred cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC
Confidence 46789999999999999999999999999999988766431 134678999999999999999999999999998631
Q ss_pred CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH-hcCCCC--
Q 018075 103 GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR-RANVGP-- 178 (361)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~-- 178 (361)
.....|+|++|++++++.++++|+++++++|+.+ ....+||+++. ..++++
T Consensus 91 -------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 145 (336)
T TIGR02817 91 -------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV 145 (336)
T ss_pred -------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCC
Confidence 0123689999999999999999999999998855 47788999885 477777
Q ss_pred ---CCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 179 ---ETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 179 ---g~~vlI~G-~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
|++|||+| +|++|++++|+|+.+ |+ .|++++.++++.+.++++|++.++++.. ++.+.+.+ ..++++|
T Consensus 146 ~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~~i~~---~~~~~vd 218 (336)
T TIGR02817 146 AGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK---PLKAQLEK---LGLEAVS 218 (336)
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC---CHHHHHHH---hcCCCCC
Confidence 99999998 599999999999998 98 6888888889999999999988876432 45555544 2456899
Q ss_pred EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-------------CCcHHHHHHHHH
Q 018075 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------------RSTWPLCIEFLR 320 (361)
Q Consensus 254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~l~ 320 (361)
+++|++++.......+++|+++|+++.++... .+....+..++.++.+.... ...++++++++.
T Consensus 219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 295 (336)
T TIGR02817 219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVD 295 (336)
T ss_pred EEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHH
Confidence 99999876668999999999999999875321 22333344444444432111 135788999999
Q ss_pred cCCCCCCCceEEEec-CChhhHHHHHHHHhcCCCceEEEEe
Q 018075 321 SGKIDVKPLITHRFG-FTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 321 ~g~~~~~~~~~~~~~-l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
+|.++ +.+.+.++ ++++++++|++.+.+++..||++++
T Consensus 296 ~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 296 AGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred CCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 99984 33344444 2338999999999999889999875
No 90
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.9e-35 Score=272.90 Aligned_cols=311 Identities=22% Similarity=0.291 Sum_probs=242.3
Q ss_pred ceEEEEeeCC----ceEEEEecCCCCCC-CcEEEEEeeeecCcchhhhhccccccccc--CCCCcccCcceeEEEEEeCC
Q 018075 15 NMAAWLLGIK----TLKIQPYHLPTLGP-QDVKVRIKALGICGSDVHHFKTMRCANFI--VKKPMVIGHECAGIIEEVGS 87 (361)
Q Consensus 15 ~~~~~~~~~~----~l~~~~~~~p~~~~-~eVlV~v~~~~l~~~D~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~ 87 (361)
|++.++.+++ .+.+++.|.|+|.+ ++|+||+.++|+|++|+....|....... ...|.++|+|++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 3555666543 38999999998887 99999999999999999987764321100 12577999999999999999
Q ss_pred CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHH
Q 018075 88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSV 166 (361)
Q Consensus 88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~ 166 (361)
+++.|++||+|++.. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+
T Consensus 81 ~v~~~~~Gd~V~~~~---------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t 133 (341)
T cd08290 81 GVKSLKPGDWVIPLR---------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT 133 (341)
T ss_pred CCCCCCCCCEEEecC---------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence 999999999998631 12599999999999999999999999888865 47888
Q ss_pred HHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh----hHHHHHHHcCCCEEeecCCC-ccchhH
Q 018075 167 GVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV----QRLSIARNLGADETAKVSTD-IEDVDT 239 (361)
Q Consensus 167 a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~lg~~~~~~~~~~-~~~~~~ 239 (361)
||+++.. ..+++|++|||+| +|++|++++|+|+..|++ ++++..++ ++.+.++++|++.++++... ..++..
T Consensus 134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 212 (341)
T cd08290 134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATE 212 (341)
T ss_pred HHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHH
Confidence 9999865 7889999999998 599999999999999995 55554444 67888899999988765321 003444
Q ss_pred HHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC----------
Q 018075 240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---------- 308 (361)
Q Consensus 240 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---------- 308 (361)
.+.... ++++|++||++|+. .+...+++++++|+++.+|.... ...++....+.++.++.+....
T Consensus 213 ~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (341)
T cd08290 213 LLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEE 288 (341)
T ss_pred HHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHH
Confidence 443332 23899999999986 78889999999999999985432 2234444557788888887643
Q ss_pred -CCcHHHHHHHHHcCCCCCCCceEEEe---cCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 309 -RSTWPLCIEFLRSGKIDVKPLITHRF---GFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 309 -~~~~~~~~~~l~~g~~~~~~~~~~~~---~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
...+..+++++.+|.+.+ .....+ ++ ++++++++.+.++...+|+|+++
T Consensus 289 ~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 289 KEDMLEELAELIREGKLKA--PPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHHHHHHHcCCccC--CcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence 124778899999999843 344455 77 99999999999998999999875
No 91
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-34 Score=263.29 Aligned_cols=285 Identities=23% Similarity=0.315 Sum_probs=233.9
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075 23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP 102 (361)
Q Consensus 23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 102 (361)
|..+++++.+.|.+.++||+|||.++++|+.|++...+ ...|.++|+|++|+|+++|+++..|++||+|++.
T Consensus 11 ~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~- 82 (305)
T cd08270 11 PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGL- 82 (305)
T ss_pred CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEe-
Confidence 56788889999999999999999999999999986541 1336789999999999999999999999999862
Q ss_pred CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCE
Q 018075 103 GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETN 181 (361)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~ 181 (361)
...|+|++|+.++.+.++++|+++++++++.+. .+.+||++++.....+|++
T Consensus 83 ---------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~ 135 (305)
T cd08270 83 ---------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRR 135 (305)
T ss_pred ---------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCE
Confidence 136899999999999999999999999888654 7788999987744456999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 182 VMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 182 vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
++|+|+ |++|++++++|+..|+ .++.+++++++.+.++++|++..+.... + + .+.++|++||++|
T Consensus 136 vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-------~---~~~~~d~vl~~~g 201 (305)
T cd08270 136 VLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS---E-------L---SGAPVDLVVDSVG 201 (305)
T ss_pred EEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---c-------c---cCCCceEEEECCC
Confidence 999995 9999999999999999 5888888899999999999875543111 1 1 1357999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhh--cCcEEEEeecC-----CCcHHHHHHHHHcCCCCCCCceEE
Q 018075 261 FDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAA--REVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKPLITH 332 (361)
Q Consensus 261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~ 332 (361)
+. .....+++|+++|+++.+|..... ..++...+.. ++.++.++... .+.+..++++++++++. +.+.+
T Consensus 202 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~ 278 (305)
T cd08270 202 GP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLD--PRIGW 278 (305)
T ss_pred cH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCcc--ceecc
Confidence 76 889999999999999999865422 2233444443 57787777644 35678899999999995 44667
Q ss_pred EecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 333 RFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.+++ ++++++++.+.++...||+++++
T Consensus 279 ~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 279 RGSW--TEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred EEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 8888 99999999999998999999875
No 92
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=7.5e-35 Score=267.37 Aligned_cols=308 Identities=24% Similarity=0.282 Sum_probs=239.1
Q ss_pred ceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 15 NMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 15 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
|++..+.+ ++.+++++++.|.++++||+|||.++|+|++|+....|.... ...|.++|+|++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCCC
Confidence 34444443 357999999999999999999999999999999877654321 235778999999999999999999
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA 170 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~ 170 (361)
+++||+|++. ....|+|++|+.++.+.++++|+++++++++.+ ....+||.+
T Consensus 79 ~~~Gd~V~~~---------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 131 (327)
T PRK10754 79 IKVGDRVVYA---------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYL 131 (327)
T ss_pred CCCCCEEEEC---------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999852 112589999999999999999999999888754 467788888
Q ss_pred HHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 171 CRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 171 l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
+.. ..+++|++|+|+| +|.+|++++++|+.+|+ .++.++.++++.+.++++|++..++.. ..++.+.+.++. .
T Consensus 132 l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~ 206 (327)
T PRK10754 132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYR--EENIVERVKEIT--G 206 (327)
T ss_pred HHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCC--CCcHHHHHHHHc--C
Confidence 765 7899999999997 69999999999999999 577888889999999999998776543 345555555443 3
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcC------cEEEEeecC----CCcHHHHHH
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAARE------VDVIGIFRY----RSTWPLCIE 317 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~------~~i~~~~~~----~~~~~~~~~ 317 (361)
+.++|++||++++. .....+++++++|+++.+|..... ..+....+..++ ..+.+.... .+.+..+++
T Consensus 207 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
T PRK10754 207 GKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS 285 (327)
T ss_pred CCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHH
Confidence 56899999999975 888999999999999999865422 122222221111 112222111 123456889
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++.+|.+++.....+.|++ ++++++++.+.+++..+|+|+.
T Consensus 286 ~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 286 LIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence 9999998644444577888 9999999999999999999985
No 93
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-34 Score=264.67 Aligned_cols=308 Identities=23% Similarity=0.328 Sum_probs=243.6
Q ss_pred cceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075 14 QNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90 (361)
Q Consensus 14 ~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 90 (361)
||+++++.+++ .+++++.+.|++.++||+|||.++++|+.|+....|... .....|.++|+|++|+|+++|++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYP--PPPGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccceeeEEEEEEeCCCCC
Confidence 45666666543 578888888889999999999999999999888765431 1134467899999999999999999
Q ss_pred CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHH
Q 018075 91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVH 169 (361)
Q Consensus 91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~ 169 (361)
.+++||+|+.. ..+|+|++|++++.+.++++|+++++.+++.+ .++.+||+
T Consensus 79 ~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~ 130 (334)
T PTZ00354 79 RFKEGDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ 130 (334)
T ss_pred CCCCCCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 99999999862 12589999999999999999999999888755 57888999
Q ss_pred HHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccc-hhHHHHHHHh
Q 018075 170 ACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED-VDTDVGKIQN 246 (361)
Q Consensus 170 ~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~~~~~~ 246 (361)
+++. ..+++|++|||+| +|++|++++++|+.+|+. ++.+.+++++.+.++++|++.+++... .+ +.+.+.+..
T Consensus 131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~- 206 (334)
T PTZ00354 131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPD--EEGFAPKVKKLT- 206 (334)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCC--hhHHHHHHHHHh-
Confidence 9866 7899999999998 699999999999999995 556778889999999999987776432 22 444444332
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cc-eechHhhhcCcEEEEeecCC-----------CcHH
Q 018075 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MT-VALTPAAAREVDVIGIFRYR-----------STWP 313 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~~~~-----------~~~~ 313 (361)
.+.++|++||++++. .+..++++|+++|+++.++..... .. +....+..+..++.++.... +.++
T Consensus 207 -~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
T PTZ00354 207 -GEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFER 284 (334)
T ss_pred -CCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHH
Confidence 357899999999865 899999999999999999854332 11 44444556666777765331 2346
Q ss_pred HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 314 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.++++++++.+. +.+.+.+++ ++++++++.+.+++..+|+|+++
T Consensus 285 ~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 285 EVLPYMEEGEIK--PIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV 328 (334)
T ss_pred HHHHHHHCCCcc--CccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence 788999999984 446677888 99999999999888889999853
No 94
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.1e-34 Score=262.59 Aligned_cols=329 Identities=28% Similarity=0.371 Sum_probs=258.3
Q ss_pred ceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 15 NMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 15 ~~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
|++.+++ ..+.+++++.+.|.+.++|++|++.++++|++|+....|.... ....|.++|||++|+|+++|+++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP--PVKDPLIPLSDGAGEVVAVGEGVTR 78 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcccccceeEEEEEeCCCCcC
Confidence 3455555 2367899998888899999999999999999999887664321 1246789999999999999999999
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA 170 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~ 170 (361)
+++||+|++.+...|+.+.+ ..|..+.+++ ...+|+|++|+.++.+.++++|+++++.+++.+ ..+.+||++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~------~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~ 151 (336)
T cd08276 79 FKVGDRVVPTFFPNWLDGPP------TAEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA 151 (336)
T ss_pred CCCCCEEEEecccccccccc------cccccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence 99999999865544433322 2333333333 224789999999999999999999999888755 467889988
Q ss_pred HHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 171 CRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 171 l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+.. ..+++|++|+|+|+|++|++++++++..|+ .++.++.++++.+.++++|.+.+++... ..++...+.+.. .+
T Consensus 152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~~ 227 (336)
T cd08276 152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--GG 227 (336)
T ss_pred HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--CC
Confidence 865 789999999999989999999999999999 5788888889999999999888766432 134555554442 35
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 327 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~ 327 (361)
.++|++||+++.. ....++++++++|+++.+|..... ........+.++.++.+.... .+.+.+++++++++.+.
T Consensus 228 ~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~-- 304 (336)
T cd08276 228 RGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR-- 304 (336)
T ss_pred CCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc--
Confidence 6899999999855 889999999999999999865432 233344566788888887654 56788899999988883
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+...+.+++ ++++++++.+.+++..+|+++++
T Consensus 305 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 305 PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 335577888 99999999999988889999864
No 95
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5.4e-34 Score=261.89 Aligned_cols=296 Identities=23% Similarity=0.303 Sum_probs=235.4
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
+.+++++++.|.+.++||+|||.++|+|+.|++...|..... ..+|+++|+|++|+|+++|++++.+++||+|++.
T Consensus 16 ~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~-- 91 (329)
T cd08250 16 EATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATM-- 91 (329)
T ss_pred cCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCCCCCCCCCCEEEEe--
Confidence 568999999999999999999999999999998876643211 3578899999999999999999999999999862
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHh-cCCCCCCEE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR-ANVGPETNV 182 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~-~~~~~g~~v 182 (361)
..|+|++|+.++.+.++++|++. .+.+++...+.+||+++.. .++++|+++
T Consensus 92 ---------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~~l~~~~~~~~~~~v 143 (329)
T cd08250 92 ---------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASIALEEVGEMKSGETV 143 (329)
T ss_pred ---------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHHHHHHhcCCCCCCEE
Confidence 26899999999999999999983 2334455688899999865 789999999
Q ss_pred EEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075 183 MIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261 (361)
Q Consensus 183 lI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 261 (361)
+|+| +|++|++++++|+..|+ .++.+++++++.+.++++|++.+++... .++.+.+.+. .+.++|++||++|+
T Consensus 144 lI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~---~~~~vd~v~~~~g~ 217 (329)
T cd08250 144 LVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE---YPKGVDVVYESVGG 217 (329)
T ss_pred EEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh---cCCCCeEEEECCcH
Confidence 9998 69999999999999999 4777778888889999999877765432 3444444333 34689999999996
Q ss_pred hHHHHHHHHhhcCCCEEEEEccCCCCc---------cee-chHhhhcCcEEEEeecC------CCcHHHHHHHHHcCCCC
Q 018075 262 DKTMSTALNATRPGGKVCLIGLAKTEM---------TVA-LTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKID 325 (361)
Q Consensus 262 ~~~~~~~~~~l~~~G~~v~~g~~~~~~---------~~~-~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~~~ 325 (361)
. .....+++++++|+++.+|...... ... ......++.++.+.... .+.+.+++++++++.+.
T Consensus 218 ~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (329)
T cd08250 218 E-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLV 296 (329)
T ss_pred H-HHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCee
Confidence 4 8999999999999999998654210 011 12345667777776532 34577889999999885
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 326 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 326 ~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
......+.+++ +++++|++.+.++...+|++++
T Consensus 297 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 297 CEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred eeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence 43334455777 9999999999999888999874
No 96
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=2.5e-34 Score=265.04 Aligned_cols=313 Identities=26% Similarity=0.346 Sum_probs=237.1
Q ss_pred ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 15 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
|++.++.++ ..+++++++.|.++++||+|+|.++++|++|+....+.. ....|.++|+|++|+|+.+|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF 76 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence 356666667 789999999999999999999999999999988764422 12357789999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l 171 (361)
++||+|++.+...++ ....+|+|++|+.++.+.++++|+++++++++.+. ++.+||+++
T Consensus 77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l 136 (339)
T cd08249 77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL 136 (339)
T ss_pred CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence 999999975321110 01247999999999999999999999999888664 788899988
Q ss_pred Hh-cCC----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhH
Q 018075 172 RR-ANV----------GPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 239 (361)
Q Consensus 172 ~~-~~~----------~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 239 (361)
.. .++ ++++++||+|+ |++|++++++|+..|++ ++.+. ++++.+.++++|++.++++. ..++.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~--~~~~~~ 212 (339)
T cd08249 137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH--DPDVVE 212 (339)
T ss_pred hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC--CchHHH
Confidence 54 433 79999999995 99999999999999994 56665 45888888999998877643 245555
Q ss_pred HHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcC--CCEEEEEccCCCCcceechHhhhcCcEEEEeec---C-----C
Q 018075 240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP--GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR---Y-----R 309 (361)
Q Consensus 240 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~---~-----~ 309 (361)
.++++ .++++|++||++|++..+...++++++ +|+++.++......... ............... . .
T Consensus 213 ~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T cd08249 213 DIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEIPEDREFGE 288 (339)
T ss_pred HHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeecccccccccchH
Confidence 55443 357899999999984589999999999 99999998654321111 111111111111111 1 2
Q ss_pred CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 018075 310 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFNL 361 (361)
Q Consensus 310 ~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~-~~gkvvi~~ 361 (361)
..++.++++++++++.+. ....+++.++++++|++.+.+++ ..+|+|+++
T Consensus 289 ~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 289 VFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 457778999999999544 33445622399999999999998 899999975
No 97
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=262.40 Aligned_cols=299 Identities=27% Similarity=0.399 Sum_probs=223.4
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccc-cCCCCcccCcceeEE---EEEeC-CCCCCCCCCCEE
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF-IVKKPMVIGHECAGI---IEEVG-SEVKSLEVGDRV 98 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V 98 (361)
..+..++.++|.|.+++++|++.++++|+.|+.+..|...... -..+|.+.+.++.|+ +...| ..+..+..||.+
T Consensus 18 ~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~ 97 (347)
T KOG1198|consen 18 EVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV 97 (347)
T ss_pred ceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence 3456668999999999999999999999999999887643211 024564444444444 44444 233445556655
Q ss_pred EecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHh-c--
Q 018075 99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-A-- 174 (361)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~-~-- 174 (361)
.. ....|+|+||+++++..++++|+++++.+||.++ ++.+||.++.. .
T Consensus 98 ~~----------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~ 149 (347)
T KOG1198|consen 98 VA----------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPG 149 (347)
T ss_pred ee----------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccc
Confidence 43 3458999999999999999999999999999775 78899999966 7
Q ss_pred ----CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 175 ----NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 175 ----~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+.++|++|||+| +|++|++++|+|+..|+ ..+++.+++++.++++++|++.+++|+. +++.+.++.. .+
T Consensus 150 ~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~ 223 (347)
T KOG1198|consen 150 KRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TG 223 (347)
T ss_pred ccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cC
Confidence 799999999997 69999999999999996 4566669999999999999999999865 4555554433 36
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhh--hc----------CcEEEEee--cCCCcHHH
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAA--AR----------EVDVIGIF--RYRSTWPL 314 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~--~~----------~~~i~~~~--~~~~~~~~ 314 (361)
.+||+||||+|+. .......++..+|+...++..... .+....... .+ ........ ...+.++.
T Consensus 224 ~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 302 (347)
T KOG1198|consen 224 KGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA 302 (347)
T ss_pred CCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence 7999999999987 777888888888765555433211 011110000 11 11111111 11567889
Q ss_pred HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 315 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.+++++|++ ++.+.+.|++ +++.+|++.+..+...||+++.+
T Consensus 303 l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 303 LVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred HHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence 9999999988 8889999999 99999999999999999999864
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=5.8e-34 Score=260.91 Aligned_cols=296 Identities=26% Similarity=0.360 Sum_probs=239.0
Q ss_pred ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCc
Q 018075 25 TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI 104 (361)
Q Consensus 25 ~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 104 (361)
.+++++.+.|.+.+++|+|||.++++|+.|.....+.... .+..|.++|+|++|+|+++|++++.+++||+|++.+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG-- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence 6788888999999999999999999999999887654321 134578999999999999999999999999999631
Q ss_pred CCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEE
Q 018075 105 SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNV 182 (361)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~v 182 (361)
..|+|++|+.++.+.++++|+++++.+++.+ ....+||+++.. ..+++|++|
T Consensus 89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v 142 (323)
T cd05282 89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV 142 (323)
T ss_pred --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence 1589999999999999999999998888754 467788888755 678999999
Q ss_pred EEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075 183 MIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261 (361)
Q Consensus 183 lI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 261 (361)
||+|+ |.+|++++++|+.+|+ .++++..++++.+.++++|++.++++.. .++...+.+. +.+.++|++||++|+
T Consensus 143 lI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~~~~d~vl~~~g~ 217 (323)
T cd05282 143 IQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEA--TGGAGARLALDAVGG 217 (323)
T ss_pred EEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHH--hcCCCceEEEECCCC
Confidence 99985 8999999999999999 5677778888888999999988776532 3444444433 235789999999998
Q ss_pred hHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-----------CCcHHHHHHHHHcCCCCCCCc
Q 018075 262 DKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-----------RSTWPLCIEFLRSGKIDVKPL 329 (361)
Q Consensus 262 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~l~~g~~~~~~~ 329 (361)
. .....+++++++|+++.+|..... ..++...+..++.++.+.... .+.++++++++.+|.+. +.
T Consensus 218 ~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~ 294 (323)
T cd05282 218 E-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT--TP 294 (323)
T ss_pred H-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc--cC
Confidence 7 678899999999999999865442 233333444477888776543 13577899999999984 44
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
..+.|++ ++++++++.+.++...+|++++
T Consensus 295 ~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 295 VGAKFPL--EDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred ccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence 5677888 9999999999998888999874
No 99
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=8.3e-34 Score=260.10 Aligned_cols=308 Identities=19% Similarity=0.251 Sum_probs=234.7
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 15 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
|+++++.+++ ++++++.|.|.+++++|+|+|.++++|++|+....|... .....|.++|||++|+|+++ +++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~--~~~~ 76 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGG--VTRNYPHTPGIDAAGTVVSS--DDPR 76 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCC--CCCCCCCccCcccEEEEEEe--CCCC
Confidence 3566666554 799999999999999999999999999999988776531 12345789999999999999 4567
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHH
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA 170 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~ 170 (361)
+++||+|++.+. ++ +....|+|++|+.++++.++++|+++++++|+.+. .+.+|+.+
T Consensus 77 ~~~Gd~V~~~~~---------------------~~-g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~ 134 (325)
T cd05280 77 FREGDEVLVTGY---------------------DL-GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS 134 (325)
T ss_pred CCCCCEEEEccc---------------------cc-CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence 999999987321 00 11236899999999999999999999999988664 66778887
Q ss_pred HHh---cCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075 171 CRR---ANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~---~~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
++. ..+. .+++|||+|+ |++|++++++|+.+|++ |+.++.++++.+.++++|++.+++... . .....+
T Consensus 135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~~~--- 207 (325)
T cd05280 135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRED--L-LDESKK--- 207 (325)
T ss_pred HHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcchh--H-HHHHHH---
Confidence 754 2335 3579999995 99999999999999994 888889999999999999988765321 1 111111
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC---C----CcHHHHHH
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---R----STWPLCIE 317 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~----~~~~~~~~ 317 (361)
...+.++|++||++++. .+...+++++++|+++.+|.... ...+....++.++.++.+.... + +.++.+.+
T Consensus 208 ~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05280 208 PLLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLAT 286 (325)
T ss_pred HhcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHH
Confidence 12345799999999975 89999999999999999986542 2233334455678888776543 1 22344555
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++..+.. +.+...|++ ++++++++.+.+++..||+|+++
T Consensus 287 ~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 287 EWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 5566633 236678888 99999999999999999999875
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.6e-33 Score=258.04 Aligned_cols=305 Identities=20% Similarity=0.287 Sum_probs=233.3
Q ss_pred EEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075 17 AAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93 (361)
Q Consensus 17 ~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (361)
++++. +|..++++++|.|.+.+++|+|||.++++|++|+....|... .....|.++|+|++|+|++ .++..|+
T Consensus 2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG--VVRSYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC--CCCCCCccceeeeEEEEEe--cCCCCCC
Confidence 45555 335789999999999999999999999999999988776432 1124588999999999998 5667899
Q ss_pred CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH
Q 018075 94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR 172 (361)
Q Consensus 94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~ 172 (361)
+||+|++.+.. . +....|+|++|+.++.+.++++|+++++++++.+. .+.+|+.+++
T Consensus 78 ~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~ 135 (323)
T TIGR02823 78 EGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVM 135 (323)
T ss_pred CCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 99999874210 0 01236899999999999999999999999888664 5666776653
Q ss_pred ---hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075 173 ---RANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 173 ---~~~~~~g~-~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
+..+.+|+ +|||+|+ |++|++++++|+.+|++ +++++.++++.+.++++|++.+++... .+ ..++.+
T Consensus 136 ~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~--- 207 (323)
T TIGR02823 136 ALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL--- 207 (323)
T ss_pred HhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh---
Confidence 34588998 9999995 99999999999999995 666667777789999999987765321 11 122222
Q ss_pred cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC---C----CcHHHHHHHH
Q 018075 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---R----STWPLCIEFL 319 (361)
Q Consensus 248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~----~~~~~~~~~l 319 (361)
.+.++|++||++|+. .+...+++++++|+++.+|.... ........++.++.++.+.... . ..++.+.+++
T Consensus 208 ~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (323)
T TIGR02823 208 EKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDL 286 (323)
T ss_pred cCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHh
Confidence 234599999999976 78999999999999999986543 2222334455788888886532 1 1355666777
Q ss_pred HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..+.+. +. .+.+++ +++++|++.+.+++..+|+++++
T Consensus 287 ~~~~~~--~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 287 KPRNLE--SI-TREITL--EELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred hcCCCc--Cc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence 788773 33 457888 99999999999999999999874
No 101
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.7e-33 Score=255.97 Aligned_cols=296 Identities=26% Similarity=0.368 Sum_probs=233.2
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
..+++++.+.|++.++||+|||+++++|+.|+....+... ....|.++|+|++|+|+++|. ..+++||+|++...
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~ 87 (320)
T cd08243 13 EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMG 87 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CCCCCCCEEEEecC
Confidence 4577888888889999999999999999999988766431 134578999999999999995 56999999987421
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN 181 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~ 181 (361)
.. +...+|+|++|+.++.+.++++|+++++++++.+ .++.+||+++.. ..+++|++
T Consensus 88 ~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~ 145 (320)
T cd08243 88 GM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDT 145 (320)
T ss_pred CC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCE
Confidence 00 0123689999999999999999999999888744 588999999866 67899999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 182 VMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 182 vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
|||+|+ |++|++++|+|+.+|+ .++.++.++++.+.++++|++.++.. ..++.+.+.++ ++++|++||+++
T Consensus 146 vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~----~~~~d~vl~~~~ 217 (320)
T cd08243 146 LLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA----PGGFDKVLELVG 217 (320)
T ss_pred EEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh----CCCceEEEECCC
Confidence 999995 9999999999999999 57888888999999999999876542 23454444433 568999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEEccCCCCcce---echHhh--hcCcEEEEeecC---CCcHHHHHHHHHcCCCCCCCceEE
Q 018075 261 FDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPAA--AREVDVIGIFRY---RSTWPLCIEFLRSGKIDVKPLITH 332 (361)
Q Consensus 261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~--~~~~~i~~~~~~---~~~~~~~~~~l~~g~~~~~~~~~~ 332 (361)
+. .+...+++++++|+++.+|........ ...... .++..+.++... ...+++++++++++.+. +...+
T Consensus 218 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 294 (320)
T cd08243 218 TA-TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLD--IPPSK 294 (320)
T ss_pred hH-HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCcee--ccccc
Confidence 75 899999999999999999864322111 111122 455666665433 23578899999999984 34557
Q ss_pred EecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 333 RFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
.+++ +++++|++.+.++...+|+++
T Consensus 295 ~~~l--~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 295 VFTF--DEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred EEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence 7888 999999999999888889875
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=3.4e-33 Score=256.22 Aligned_cols=309 Identities=18% Similarity=0.228 Sum_probs=230.0
Q ss_pred eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
++.++.++ ..+.+++.|.|.+.++||+||+.++++|++|.....+. +......|.++|||++|+|+++| +..|
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~--~~~~~~~~~~~g~e~~G~V~~~~--~~~~ 77 (326)
T cd08289 2 QALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPG--GKIVKRYPFIPGIDLAGTVVESN--DPRF 77 (326)
T ss_pred eeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCC--ccccCCCCcCcccceeEEEEEcC--CCCC
Confidence 44455543 35889999999999999999999999999998655321 11123458899999999999964 5679
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l 171 (361)
++||+|++.+.. + +....|+|++|+.++++.++++|+++++++++.+. .+.+|+.++
T Consensus 78 ~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l 135 (326)
T cd08289 78 KPGDEVIVTSYD---------------------L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSI 135 (326)
T ss_pred CCCCEEEEcccc---------------------c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHH
Confidence 999999874210 0 11247999999999999999999999999988664 566777776
Q ss_pred Hh---cCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075 172 RR---ANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 172 ~~---~~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+. ..+. ++++|||+|+ |++|++++|+|+.+|+ .++++++++++.+.++++|++.+++... ...+.+.++
T Consensus 136 ~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~-- 209 (326)
T cd08289 136 HRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---LQEESIKPL-- 209 (326)
T ss_pred HHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---HHHHHHHhh--
Confidence 43 3334 4789999995 9999999999999999 5788888899999999999987766432 112223222
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC---CCcHHHHHHHHHcC
Q 018075 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---RSTWPLCIEFLRSG 322 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~g 322 (361)
.+.++|++||++|+. .+...+++++++|+++.+|.... ..+.....++.++.++.+.... ......+++.+.+
T Consensus 210 -~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (326)
T cd08289 210 -EKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT- 286 (326)
T ss_pred -ccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-
Confidence 356799999999975 89999999999999999996533 2233345566788888887432 1223334443332
Q ss_pred CCC---CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 323 KID---VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 323 ~~~---~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.+. ..+.+.+.|++ +++++|++.+.+++..||+|+++
T Consensus 287 ~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 287 DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence 221 12345788888 99999999999999999999874
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.6e-32 Score=251.42 Aligned_cols=306 Identities=20% Similarity=0.278 Sum_probs=236.8
Q ss_pred eEEEEeeCC------ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075 16 MAAWLLGIK------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV 89 (361)
Q Consensus 16 ~~~~~~~~~------~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (361)
++.++.+++ .+++++++.|++.+++|+|++.++++|++|+....+... ....|.++|+|++|+|+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~v 78 (336)
T cd08252 2 KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSEV 78 (336)
T ss_pred ceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCCC
Confidence 344555443 267778888889999999999999999999987665321 12457799999999999999999
Q ss_pred CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHH
Q 018075 90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGV 168 (361)
Q Consensus 90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~ 168 (361)
..|++||+|++... ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||
T Consensus 79 ~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~ 133 (336)
T cd08252 79 TLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAW 133 (336)
T ss_pred CCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHH
Confidence 99999999986310 113689999999999999999999999888755 3667788
Q ss_pred HHHH-hcCCCC-----CCEEEEEC-CCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHH
Q 018075 169 HACR-RANVGP-----ETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 240 (361)
Q Consensus 169 ~~l~-~~~~~~-----g~~vlI~G-~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 240 (361)
+++. ...+++ |++|+|+| +|++|++++++|+.+| + .+++++.++++.++++++|++.+++.. .++...
T Consensus 134 ~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~ 209 (336)
T cd08252 134 EALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLAEQ 209 (336)
T ss_pred HHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHHHH
Confidence 8874 477777 99999998 6999999999999999 7 688888889999999999998877643 244444
Q ss_pred HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC------------
Q 018075 241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY------------ 308 (361)
Q Consensus 241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------ 308 (361)
+.. ..+.++|++||++++...+..++++++++|+++.+|.... .++...+..++.++.+....
T Consensus 210 i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (336)
T cd08252 210 LEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQE--PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIE 284 (336)
T ss_pred HHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCCC--cccchhhhcccceEEEEEeeccccccccchhh
Confidence 432 2346899999999976689999999999999999985532 23333444566776654321
Q ss_pred -CCcHHHHHHHHHcCCCCCCCc-eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 309 -RSTWPLCIEFLRSGKIDVKPL-ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 309 -~~~~~~~~~~l~~g~~~~~~~-~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
...++++++++.+|.+.+... ..+.+++ +++++|++.+.++...+|++++
T Consensus 285 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 285 QHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence 134678999999999853211 1133566 9999999999999889999874
No 104
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2e-32 Score=251.37 Aligned_cols=292 Identities=20% Similarity=0.205 Sum_probs=228.5
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
+.++++++|.|++.+++|+|||.++++|+.|.....+......+...+.++|+|++|+|+++|++ .+++||+|+.
T Consensus 18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~--- 92 (329)
T cd05288 18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG--- 92 (329)
T ss_pred cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec---
Confidence 56999999999999999999999999999886555432111111223568999999999999965 6999999985
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecC-CceEECCCCCC--cccc-c-ccchhHHHHHHHHh-cCCC
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLPDNVS--LEEG-A-MCEPLSVGVHACRR-ANVG 177 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~vP~~~~--~~~a-a-~~~~~~~a~~~l~~-~~~~ 177 (361)
.++|++|+.++. +.++++|++++ +.++ + +..++.+||+++.. ..+.
T Consensus 93 ----------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~ 144 (329)
T cd05288 93 ----------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPK 144 (329)
T ss_pred ----------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCC
Confidence 358999999999 99999999985 3333 3 44578899998865 7889
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
+|++|||+| +|++|++++++|+..|+ .++++++++++.+.+++ +|++.++++.. .++.+.+.++ .+.++|++
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~---~~~~~d~v 218 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEA---APDGIDVY 218 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHh---ccCCceEE
Confidence 999999998 69999999999999999 68888888999999888 99988776532 3444444433 24689999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc------eechHhhhcCcEEEEeecC------CCcHHHHHHHHHcCC
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT------VALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGK 323 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~ 323 (361)
||++|+. .++.++++++++|+++.+|....... ......+.++.++.+.... .+.+.++++++.+|.
T Consensus 219 i~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 297 (329)
T cd05288 219 FDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGK 297 (329)
T ss_pred EEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCC
Confidence 9999975 89999999999999999985443211 1233456777888776543 245778899999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
+++.+ ...+++ ++++++++.+.+++..+|+++
T Consensus 298 i~~~~--~~~~~l--~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 298 LKYRE--DVVEGL--ENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred ccccc--cccccH--HHHHHHHHHHhcCCCccceeC
Confidence 85443 344677 999999999998888888874
No 105
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=5.4e-32 Score=247.48 Aligned_cols=303 Identities=29% Similarity=0.433 Sum_probs=240.8
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
+.++++++|.|.+.+++|+|++.++++|++|+....|.... ....|+++|||++|+|+++|+++..|++||+|++.+.
T Consensus 13 ~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~ 90 (325)
T cd08253 13 DVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNL 90 (325)
T ss_pred ccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEecc
Confidence 45889999999999999999999999999999877664321 2356889999999999999999999999999997421
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN 181 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~ 181 (361)
. + ....|+|++|+.++.+.++++|+++++++++.+ .++.+|++.+.. .++++|++
T Consensus 91 ~--------------------~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~ 147 (325)
T cd08253 91 G--------------------W---GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGET 147 (325)
T ss_pred c--------------------c---CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCE
Confidence 0 0 013689999999999999999999999888755 578889998865 88999999
Q ss_pred EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
++|+| +|++|++++++++..|+ .++.++.++++.+.++++|++.+++.. ..++.+.+.++. .+.++|+++++.+
T Consensus 148 vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~ 222 (325)
T cd08253 148 VLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILAAT--AGQGVDVIIEVLA 222 (325)
T ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHHHc--CCCceEEEEECCc
Confidence 99998 59999999999999999 578888888999999999988776643 234444444332 2468999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-------CCcHHHHHHHHHcCCCCCCCceEEE
Q 018075 261 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHR 333 (361)
Q Consensus 261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~g~~~~~~~~~~~ 333 (361)
+. .....+++++++|+++.++.......+....++.++.++.+...+ .+.++.+.+++.++.+ .+...+.
T Consensus 223 ~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~ 299 (325)
T cd08253 223 NV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGAL--RPVIARE 299 (325)
T ss_pred hH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCc--cCccccE
Confidence 76 788899999999999999865432234444445666666665433 2245667778888887 4445677
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 334 FGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 334 ~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+++ ++++++++.+.++...+|+++++
T Consensus 300 ~~~--~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 300 YPL--EEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred EcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 888 99999999999998899999864
No 106
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=8e-32 Score=246.91 Aligned_cols=306 Identities=21% Similarity=0.254 Sum_probs=234.0
Q ss_pred eEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
++.++.+++ .++++++|.|+|+++||+|+|.++++|++|+....|... .....|.++|+|++|+|++ ++++++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~ 77 (324)
T cd08288 2 KALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG--IVRTFPLVPGIDLAGTVVE--SSSPRF 77 (324)
T ss_pred eeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc--ccCCCCCccccceEEEEEe--CCCCCC
Confidence 455555544 699999999999999999999999999999987766431 1124578899999999999 777889
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l 171 (361)
++||+|++.... . ....+|+|++|+.++.+.++++|+++++++++.+. .+.+++.++
T Consensus 78 ~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~ 135 (324)
T cd08288 78 KPGDRVVLTGWG---------------------V-GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCV 135 (324)
T ss_pred CCCCEEEECCcc---------------------C-CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHH
Confidence 999999973100 0 00136899999999999999999999998888554 566666555
Q ss_pred H---hcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075 172 R---RANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 172 ~---~~~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+ ..... +|++|||+|+ |++|++++|+|+.+|+ .+++++.++++.++++++|++.++++.. ....+..+
T Consensus 136 ~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~-- 208 (324)
T cd08288 136 MALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL-- 208 (324)
T ss_pred HHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh--
Confidence 3 44555 6789999995 9999999999999999 5777778889999999999988877532 22222222
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-------CCcHHHHHHH
Q 018075 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEF 318 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~ 318 (361)
...++|.++|++++. .....+..++.+|+++.+|.... ........+..++.++.+.... .+.+..++++
T Consensus 209 -~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (324)
T cd08288 209 -QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARD 286 (324)
T ss_pred -ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHH
Confidence 245689999999964 77888899999999999986432 1123334444778888886432 2246667788
Q ss_pred HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+.++.+ ++. .+.+++ +++++|++.+.+++..+|+++++
T Consensus 287 ~~~~~~--~~i-~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 287 LDPALL--EAL-TREIPL--ADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HhcCCc--ccc-ceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence 888877 332 577888 99999999999999999999874
No 107
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.1e-31 Score=245.24 Aligned_cols=304 Identities=27% Similarity=0.394 Sum_probs=241.1
Q ss_pred eEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
++.++.+ ++.+++++.+.|.+.+++|+|||.++++|+.|+....+... .....|.++|+|++|+|+++|+++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (323)
T cd05276 2 KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP--PPPGASDILGLEVAGVVVAVGPGVTGW 79 (323)
T ss_pred eEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC--CCCCCCCcccceeEEEEEeeCCCCCCC
Confidence 5555554 45688888888888999999999999999999987765331 123457899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
++||+|++. ..+|+|++|+.++.+.++++|+++++.+++.+ .++.++++++
T Consensus 80 ~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~ 131 (323)
T cd05276 80 KVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNL 131 (323)
T ss_pred CCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHH
Confidence 999999862 12589999999999999999999998888755 5788899987
Q ss_pred Hh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 RR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
.. ..+.++++++|+| +|++|++++++++..|+ .++.++.++++.+.++++|++.+++... .++...+.+.. .+
T Consensus 132 ~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~ 206 (323)
T cd05276 132 FQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT--EDFAEEVKEAT--GG 206 (323)
T ss_pred HHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc--hhHHHHHHHHh--CC
Confidence 65 7889999999999 59999999999999999 5788888888898889999877665432 34444444332 24
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecCC-----------CcHHHHHH
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------STWPLCIE 317 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~ 317 (361)
.++|+++|+.|+. .+...++++.++|+++.++..+. ........++.++.++.++.... ..+.++++
T Consensus 207 ~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (323)
T cd05276 207 RGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWP 285 (323)
T ss_pred CCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHH
Confidence 6899999999976 68889999999999999986432 22333444456788888765431 23567888
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
++.++++ .+..++.|++ ++++++++.+.++...+|+++
T Consensus 286 ~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 286 LFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence 9999988 4456678888 999999999998888888874
No 108
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.7e-32 Score=254.04 Aligned_cols=296 Identities=25% Similarity=0.355 Sum_probs=225.3
Q ss_pred eEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccc-------c-----ccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 26 LKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCA-------N-----FIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 26 l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~-------~-----~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++.+.|+| +++||+|+|.++++|++|+....|...+ . .....|.++|+|++|+|+++|++++++
T Consensus 16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~ 95 (350)
T cd08248 16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF 95 (350)
T ss_pred eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence 89999999999 5999999999999999999887763210 0 023568899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
++||+|++.+. ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||+++
T Consensus 96 ~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l 150 (350)
T cd08248 96 EIGDEVWGAVP-------------------------PWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSAL 150 (350)
T ss_pred CCCCEEEEecC-------------------------CCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHH
Confidence 99999987321 113689999999999999999999999888755 4788899988
Q ss_pred Hh-cCCC----CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075 172 RR-ANVG----PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 172 ~~-~~~~----~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
.. ..+. +|++|+|+| +|++|++++++|+.+|++ ++++..+ ++.+.++++|++.+++... .++... +.
T Consensus 151 ~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~---l~ 223 (350)
T cd08248 151 VNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSLGADDVIDYNN--EDFEEE---LT 223 (350)
T ss_pred HHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHhCCceEEECCC--hhHHHH---HH
Confidence 55 5564 499999998 699999999999999995 6666554 6778889999887766432 233333 22
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc----ce----echHhhhc---------CcEEEEe--e
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM----TV----ALTPAAAR---------EVDVIGI--F 306 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~----~~~~~~~~---------~~~i~~~--~ 306 (361)
. ..++|++||++|+. .....+++++++|+++.+|...... .. ....+.+. ...+... .
T Consensus 224 ~--~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
T cd08248 224 E--RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFS 300 (350)
T ss_pred h--cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 2 35799999999977 8999999999999999998543110 01 00111111 1111111 1
Q ss_pred cCCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 307 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 307 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.....+.++++++.+|.+ .+.+++.|++ ++++++++.+.++...+|++++
T Consensus 301 ~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 301 PSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred CCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence 124568899999999988 4446678888 9999999999988888898874
No 109
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8e-32 Score=247.63 Aligned_cols=291 Identities=26% Similarity=0.340 Sum_probs=227.2
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
.++++++.+.|.|.+++|+|++.++++|++|+....|.... ....|+++|+|++|+|+.+|+++..|++||+|++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~- 89 (331)
T cd08273 13 EVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPD--QPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT- 89 (331)
T ss_pred ccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeC-
Confidence 57999999999999999999999999999999887664321 124688999999999999999999999999998631
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN 181 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~ 181 (361)
..|+|++|+.++.+.++++|+++++++++.+ .++.+||+++.. .++++|++
T Consensus 90 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~ 142 (331)
T cd08273 90 ---------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQR 142 (331)
T ss_pred ---------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCE
Confidence 1489999999999999999999999888744 578889998865 78999999
Q ss_pred EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
++|+| +|++|++++++|+..|+ .++.++. +++.++++++|+..+ +. ...++... .. .++++|++|++++
T Consensus 143 vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~~-~~--~~~~~~~~--~~---~~~~~d~vl~~~~ 212 (331)
T cd08273 143 VLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATPI-DY--RTKDWLPA--ML---TPGGVDVVFDGVG 212 (331)
T ss_pred EEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeEE-cC--CCcchhhh--hc---cCCCceEEEECCc
Confidence 99999 59999999999999999 5777766 888899999997543 32 22233222 12 2458999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEEccCCCCcceech--------------Hhh--hcCcEEEEeecC--------CCcHHHHH
Q 018075 261 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--------------PAA--AREVDVIGIFRY--------RSTWPLCI 316 (361)
Q Consensus 261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--------------~~~--~~~~~i~~~~~~--------~~~~~~~~ 316 (361)
+. ....++++++++|+++.+|........... ... .+.....+.... .+.++.++
T Consensus 213 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 291 (331)
T cd08273 213 GE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELL 291 (331)
T ss_pred hH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHH
Confidence 87 689999999999999999865432111100 011 122222222111 34678899
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 317 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
+++++|.+ .+...+.+++ ++++++++.+.++...||+|+
T Consensus 292 ~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 292 DLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence 99999998 4456677888 999999999999888889885
No 110
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-31 Score=244.84 Aligned_cols=306 Identities=28% Similarity=0.366 Sum_probs=237.9
Q ss_pred eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++.++ +.+++++.+.|.+.+++|+|+|.++++|++|+....+... .....|.++|+|++|+|+++|++++.|
T Consensus 2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (326)
T cd08272 2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTRF 79 (326)
T ss_pred eEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCCC
Confidence 56666644 3488889888889999999999999999999988765432 113457899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
++||+|++... + .....|+|++|+.++.+.++++|+++++..++.+ ..+.+||+++
T Consensus 80 ~~Gd~V~~~~~-----------~------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l 136 (326)
T cd08272 80 RVGDEVYGCAG-----------G------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGL 136 (326)
T ss_pred CCCCEEEEccC-----------C------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHH
Confidence 99999986320 0 0013689999999999999999999999888755 4678888887
Q ss_pred H-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 R-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~-~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
. ..++++|++++|+| +|++|++++++++.+|+ .++.++.+ ++.+.++++|.+.+++... . +.+.+.++. .+
T Consensus 137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~--~~ 209 (326)
T cd08272 137 VDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHT--GG 209 (326)
T ss_pred HHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhc--CC
Confidence 4 48899999999998 69999999999999999 46777777 8888889999877665322 2 444444332 35
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC------------CCcHHHHHH
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY------------RSTWPLCIE 317 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~ 317 (361)
.++|+++|++++. .....+++++++|+++.++... . ..+.....++..+.+.... .+.+..+++
T Consensus 210 ~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (326)
T cd08272 210 RGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAAR 285 (326)
T ss_pred CCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHH
Confidence 6899999999975 7888999999999999987553 1 1222233566666655421 235777888
Q ss_pred HHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 318 FLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 318 ~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++.++.+. +.++ +.|++ ++++++++.+.++...+|+++++
T Consensus 286 ~l~~~~l~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 286 LVERGQLR--PLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHCCCcc--cccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence 99999883 3333 67888 99999999999888889999875
No 111
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.4e-31 Score=248.25 Aligned_cols=315 Identities=20% Similarity=0.268 Sum_probs=227.1
Q ss_pred eEEEEeeC-CceEEEEecCCCC---CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC-
Q 018075 16 MAAWLLGI-KTLKIQPYHLPTL---GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK- 90 (361)
Q Consensus 16 ~~~~~~~~-~~l~~~~~~~p~~---~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~- 90 (361)
++.++.++ +.++++.++.|.| .+++|+||+.++++|++|+....+... .....|.++|+|++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF--HFKVKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc--ccccCCCccCceeEEEEEEeCccccc
Confidence 34555555 4566666555544 899999999999999999887643211 1112377899999999999999998
Q ss_pred CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC----ceEECCCCCCccccccc-chhH
Q 018075 91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMC-EPLS 165 (361)
Q Consensus 91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~vP~~~~~~~aa~~-~~~~ 165 (361)
.|++||+|++..... ....|+|++|++++.. .++++|+++++++++.+ ..+.
T Consensus 80 ~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ 136 (352)
T cd08247 80 EWKVGDEVCGIYPHP-----------------------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG 136 (352)
T ss_pred CCCCCCEEEEeecCC-----------------------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence 899999998742111 1136899999999988 78999999999998865 4677
Q ss_pred HHHHHHHh-c-CCCCCCEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecCCCcc-chhHH
Q 018075 166 VGVHACRR-A-NVGPETNVMIMGS-GPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIE-DVDTD 240 (361)
Q Consensus 166 ~a~~~l~~-~-~~~~g~~vlI~G~-g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~ 240 (361)
+||++++. . .+++|++++|+|+ |.+|++++++|+..|. +.++.++. +++.+.++++|++.+++...... .+...
T Consensus 137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~ 215 (352)
T cd08247 137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKP 215 (352)
T ss_pred HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHH
Confidence 89999876 4 6999999999985 7999999999999854 35666654 55556778999988776533210 02222
Q ss_pred HHHHHhhcCCCccEEEEccCChHHHHHHHHhhc---CCCEEEEEc-cCCCCcc-----------e----echHhhhcCcE
Q 018075 241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR---PGGKVCLIG-LAKTEMT-----------V----ALTPAAAREVD 301 (361)
Q Consensus 241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~~~-----------~----~~~~~~~~~~~ 301 (361)
+.+.. ..+.++|++|||+|+......++++++ ++|+++.++ ....... . ......+...+
T Consensus 216 ~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
T cd08247 216 VLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYN 294 (352)
T ss_pred HHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcc
Confidence 21111 125689999999998558889999999 999999874 2211100 0 01112233334
Q ss_pred EEEeecC--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 302 VIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 302 i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+...... .+.++++++++.++.+ .+...+.+++ +++++|++.+.+++..||+++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 295 YQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred eEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence 3332211 2457889999999988 4446678888 99999999999998899999875
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-31 Score=244.97 Aligned_cols=308 Identities=24% Similarity=0.310 Sum_probs=236.9
Q ss_pred ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 15 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
|++.++.+++ .+++++.|.|.+.+++|+|||.++++|++|+....+.... ...|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~ 77 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG 77 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence 3556666777 8999999999999999999999999999999877654311 233778999999999999999999
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA 170 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~ 170 (361)
+++||+|++.+. ....|+|++|+.++.+.++++|+++++.+++.+ .++.+|+++
T Consensus 78 ~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~ 132 (325)
T cd08271 78 WKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA 132 (325)
T ss_pred CCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence 999999997321 113689999999999999999999999888755 578889999
Q ss_pred HHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 171 CRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 171 l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
++. +++++|++++|+|+ |++|++++++++..|++ ++.+. ++++.+.++++|++.+++. ...++...+.... .
T Consensus 133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~ 206 (325)
T cd08271 133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKEIT--G 206 (325)
T ss_pred HHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHHHc--C
Confidence 865 78899999999995 89999999999999995 55555 6677788888998776653 2234444444332 3
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc--ceechHhhhcCcEEEEeecC---------CCcHHHHHH
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY---------RSTWPLCIE 317 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~ 317 (361)
+.++|++++++++. .....+++++++|+++.++...... ........++.+++.+.... .+.+.++++
T Consensus 207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T cd08271 207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE 285 (325)
T ss_pred CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence 56799999999986 6677999999999999986433211 11112233344444443222 123567889
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
+++++.+. +...+.|++ +++.++++.+.++...+|+++++
T Consensus 286 ~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 286 LLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence 99999884 445577888 99999999999988889999874
No 113
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=5.1e-31 Score=240.39 Aligned_cols=295 Identities=28% Similarity=0.355 Sum_probs=234.3
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
..+.+++.+.|.+.+++|+|+|.++++|+.|+....+... ...|.++|+|++|+|+.+|++++++++||+|++..
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 86 (320)
T cd05286 12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG- 86 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence 4577888887778999999999999999999987765431 24577899999999999999999999999998621
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN 181 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~ 181 (361)
..|+|++|+.++.+.++++|++++..+++.+ ....++++++.. .++++|++
T Consensus 87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~ 139 (320)
T cd05286 87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT 139 (320)
T ss_pred ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence 1589999999999999999999999888744 567788888764 88999999
Q ss_pred EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
|||+| +|++|++++++++.+|+ .+++++.++++.+.++++|++.++... ..++...+.... .+.++|++|+|++
T Consensus 140 vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vl~~~~ 214 (320)
T cd05286 140 VLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR--DEDFVERVREIT--GGRGVDVVYDGVG 214 (320)
T ss_pred EEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--chhHHHHHHHHc--CCCCeeEEEECCC
Confidence 99999 69999999999999999 578888888999999999998776532 234444444332 3568999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC---------CCcHHHHHHHHHcCCCCCCCce
Q 018075 261 FDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLI 330 (361)
Q Consensus 261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~ 330 (361)
+. ..+..+++++++|+++.+|..... ..+....+..+++++.+.... .+.+.++++++.++.+.+ ..
T Consensus 215 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~ 291 (320)
T cd05286 215 KD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKV--EI 291 (320)
T ss_pred cH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcC--cc
Confidence 75 889999999999999999865432 122333333566676543221 234567889999998843 35
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 331 THRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
.+.|++ ++++++++.+.++...+|++++
T Consensus 292 ~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 292 GKRYPL--ADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred cceEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence 567888 9999999999999888999875
No 114
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.2e-31 Score=237.36 Aligned_cols=266 Identities=37% Similarity=0.652 Sum_probs=216.9
Q ss_pred cEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCC
Q 018075 40 DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNL 119 (361)
Q Consensus 40 eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 119 (361)
||+|+|.++++|+.|++...|... .....|.++|+|++|+|+++|++++.|++||+|++.+...|+.|.+|.. .
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~ 74 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L 74 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence 689999999999999998876532 1235678999999999999999999999999999998899999999986 6
Q ss_pred CCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHH
Q 018075 120 CPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLA 197 (361)
Q Consensus 120 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~l 197 (361)
|+...+.+ ....|+|++|+.++.+.++++|+++++++++.+ .++.+||++++. ..++++++|||+|+|++|++++++
T Consensus 75 ~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~ 153 (271)
T cd05188 75 CPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL 153 (271)
T ss_pred CCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 77665544 345899999999999999999999999998866 689999999876 556999999999976699999999
Q ss_pred HHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 018075 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 277 (361)
Q Consensus 198 a~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~ 277 (361)
++..|. .+++++.++++.+.++++|++.+++... .+....+. ...+.++|++|++++.....+.++++|+++|+
T Consensus 154 a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 154 AKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 999998 6888889999999999999887765432 33433333 22457899999999984589999999999999
Q ss_pred EEEEccCCCCccee-chHhhhcCcEEEEeecC-CCcHHHHHHH
Q 018075 278 VCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEF 318 (361)
Q Consensus 278 ~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~~ 318 (361)
++.++......... ....+.++.++.++..+ ..+++.++++
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence 99998665432222 34567788999888766 4466666654
No 115
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=6.3e-31 Score=238.27 Aligned_cols=288 Identities=23% Similarity=0.391 Sum_probs=226.5
Q ss_pred CCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccc
Q 018075 33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLC 112 (361)
Q Consensus 33 ~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~ 112 (361)
.|.+.+++|+|++.++++|+.|+....+... ....+|.++|+|++|+|+++|++++++++||+|++...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP--TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCC--CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence 5778999999999999999999988766432 12356889999999999999999999999999986311
Q ss_pred cCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHhcCCCCCCEEEEEC-CCHH
Q 018075 113 KAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMG-SGPI 190 (361)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G-~g~~ 190 (361)
...|+|++|+.++++.++++|+++++++++.+ ..+.+||++++..++++|++++|+| +|++
T Consensus 71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~ 133 (303)
T cd08251 71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT 133 (303)
T ss_pred -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence 13689999999999999999999999888865 4788899998778899999999996 6999
Q ss_pred HHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHH
Q 018075 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 270 (361)
Q Consensus 191 G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~ 270 (361)
|++++|+++.+|+ .+++++.++++.+.++++|++.+++... .++...+..+. .+.++|+++|++++. .....++
T Consensus 134 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~~~d~v~~~~~~~-~~~~~~~ 207 (303)
T cd08251 134 GLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLT--GGRGVDVVINTLSGE-AIQKGLN 207 (303)
T ss_pred HHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHc--CCCCceEEEECCcHH-HHHHHHH
Confidence 9999999999999 5888888888999999999988776432 35555554432 356899999999854 8899999
Q ss_pred hhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEe-----ecC-----CCcHHHHHHHHHcCCCCCCCceEEEecCCh
Q 018075 271 ATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGI-----FRY-----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQ 338 (361)
Q Consensus 271 ~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~-----~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~ 338 (361)
+++++|+++.++..+.. ..+.... ..++..+... ... .+.+.++++++++|.++ +...+.|++
T Consensus 208 ~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~-- 282 (303)
T cd08251 208 CLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFPF-- 282 (303)
T ss_pred HhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEcH--
Confidence 99999999998754321 1122211 1222222221 111 24577788999999884 445677888
Q ss_pred hhHHHHHHHHhcCCCceEEEE
Q 018075 339 KEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 339 ~~~~~a~~~l~~~~~~gkvvi 359 (361)
++++++++.+.+++..+|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 283 DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 999999999999888888874
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=2.1e-30 Score=237.11 Aligned_cols=298 Identities=25% Similarity=0.343 Sum_probs=236.1
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
..+++++.+.|.+++++++|+|.++++|+.|+....+... .+..+|.++|+|++|+|+.+|+++..+++||+|+..
T Consensus 13 ~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~-- 88 (325)
T TIGR02824 13 EVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYP--PPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCAL-- 88 (325)
T ss_pred ccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEc--
Confidence 4577888777778999999999999999999887755332 112357899999999999999999999999999862
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH-hcCCCCCCE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR-RANVGPETN 181 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~ 181 (361)
...|+|++|+.++.+.++++|+++++..++.+ .++.++++++. ...+++|++
T Consensus 89 --------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~ 142 (325)
T TIGR02824 89 --------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGET 142 (325)
T ss_pred --------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCE
Confidence 12489999999999999999999998777644 57888898864 488999999
Q ss_pred EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
++|+| +|++|++++++++..|+ .++.+..++++.+.++++|++.+++.. ..++...+.... .+.++|+++++++
T Consensus 143 vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~~i~~~~ 217 (325)
T TIGR02824 143 VLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYR--EEDFVEVVKAET--GGKGVDVILDIVG 217 (325)
T ss_pred EEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecC--chhHHHHHHHHc--CCCCeEEEEECCc
Confidence 99998 59999999999999999 577777888888888889987765532 234444444332 3457999999999
Q ss_pred ChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecCC-----------CcHHHHHHHHHcCCCCCCC
Q 018075 261 FDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------STWPLCIEFLRSGKIDVKP 328 (361)
Q Consensus 261 ~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~l~~g~~~~~~ 328 (361)
+. .....+++++++|+++.+|.... ...+....+..++.++.+..... ..+.+++++++++.+ .+
T Consensus 218 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~ 294 (325)
T TIGR02824 218 GS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRV--RP 294 (325)
T ss_pred hH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcc--cC
Confidence 75 88899999999999999986442 12334444557888888775321 234567889999988 44
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..++.+++ ++++++++.+.++...+|+++++
T Consensus 295 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 295 VIDKVFPL--EDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred ccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence 46677888 99999999999888889999875
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.8e-30 Score=234.46 Aligned_cols=311 Identities=27% Similarity=0.398 Sum_probs=239.7
Q ss_pred eEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
+++++.+ +..+++++.+.|++.+++++|+|.++++|+.|+....+..... ...|.++|||++|+|+.+|++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 2 RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred eEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCcC
Confidence 4444443 2468888888888999999999999999999998776643221 3457899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
++||+|++.+.. .....|+|++|+.++.+.++++|+++++++++.+ ..+.+||.++
T Consensus 80 ~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~ 136 (328)
T cd08268 80 AVGDRVSVIPAA-----------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGAL 136 (328)
T ss_pred CCCCEEEecccc-----------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHH
Confidence 999999874210 0123689999999999999999999998887744 5888899988
Q ss_pred Hh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 RR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+. ..+.++++++|+| +|++|++++++++..|+ .++.++.+.++.+.++++|.+.+++... .++...+.... .+
T Consensus 137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~ 211 (328)
T cd08268 137 VELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEVLRIT--GG 211 (328)
T ss_pred HHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHh--CC
Confidence 64 7889999999998 59999999999999999 5777778888888888899877665432 34444443332 24
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC---------CCcHHHHHHHH
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFL 319 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~l 319 (361)
.++|+++++.++. ....++++++++|+++.+|..... ........+.++..+.+.... ...++.+.+++
T Consensus 212 ~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (328)
T cd08268 212 KGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGL 290 (328)
T ss_pred CCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHH
Confidence 5799999999985 889999999999999999865431 223333346677777665432 12345566777
Q ss_pred HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
.++.+. +.....|++ ++++++++.+..+...+|++++.
T Consensus 291 ~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 291 ASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 788873 345567788 99999999999988889999863
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=1.7e-30 Score=236.04 Aligned_cols=300 Identities=27% Similarity=0.374 Sum_probs=230.5
Q ss_pred eEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075 16 MAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92 (361)
Q Consensus 16 ~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (361)
++.++..++ .+.+++.+.|++++++|+|+|.++++|+.|+....|..........|.++|+|++|+|+.+|+++..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~ 81 (309)
T cd05289 2 KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGF 81 (309)
T ss_pred ceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCC
Confidence 344554433 36788888888999999999999999999998876643211123458899999999999999999999
Q ss_pred CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075 93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC 171 (361)
Q Consensus 93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l 171 (361)
++||+|++.+. ....|+|++|+.++.+.++++|+++++..++.+ ..+.++++++
T Consensus 82 ~~G~~V~~~~~-------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~ 136 (309)
T cd05289 82 KVGDEVFGMTP-------------------------FTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQAL 136 (309)
T ss_pred CCCCEEEEccC-------------------------CCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHH
Confidence 99999986421 012689999999999999999999998887755 4677888888
Q ss_pred Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 RR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+. ..+.+|++++|+|+ |.+|++++++++..|++ ++.++.++ +.+.++++|++.++.... .++.+ ...+
T Consensus 137 ~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~~~ 206 (309)
T cd05289 137 FELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER------AAAP 206 (309)
T ss_pred HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------ccCC
Confidence 76 56899999999995 99999999999999995 66666666 788888899877665332 22222 1235
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCC
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVK 327 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~ 327 (361)
.++|++++++++. .....+++++++|+++.+|....... ....++..+...... .+.+.+++++++++.+ .
T Consensus 207 ~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 279 (309)
T cd05289 207 GGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKL--R 279 (309)
T ss_pred CCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCE--E
Confidence 6799999999977 88999999999999999986543211 222334444433222 4578889999999987 4
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
+..++.|++ ++++++++.+..+...+|+++
T Consensus 280 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 280 PVVDRVFPL--EDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred EeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence 456678888 999999999998877788774
No 119
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.4e-30 Score=236.41 Aligned_cols=295 Identities=28% Similarity=0.349 Sum_probs=222.2
Q ss_pred EEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCC
Q 018075 27 KIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISC 106 (361)
Q Consensus 27 ~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 106 (361)
++++.+.|++.++||+|++.++++|++|+....|..........|.++|+|++|+|+++|+++.++++||+|+....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--- 91 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLP--- 91 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEecc---
Confidence 88889999999999999999999999999887654311111234678999999999999999999999999986321
Q ss_pred CCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEE
Q 018075 107 GHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMI 184 (361)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI 184 (361)
....|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++. ..+++|++|+|
T Consensus 92 ----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli 149 (319)
T cd08267 92 ----------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI 149 (319)
T ss_pred ----------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 013589999999999999999999999887755 578889999876 56899999999
Q ss_pred ECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh-
Q 018075 185 MGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD- 262 (361)
Q Consensus 185 ~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~- 262 (361)
+|+ |++|++++++|+.+|+ .+++++.+ ++.+.++++|++.+++... .++. .. ...+.++|++++|+++.
T Consensus 150 ~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~--~~~~~~~d~vi~~~~~~~ 220 (319)
T cd08267 150 NGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---AL--TAGGEKYDVIFDAVGNSP 220 (319)
T ss_pred EcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hh--ccCCCCCcEEEECCCchH
Confidence 995 9999999999999999 56776654 8888889999877665432 2222 11 12356799999999842
Q ss_pred HHHHHHHHhhcCCCEEEEEccCCCCcceec-----h-HhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEecC
Q 018075 263 KTMSTALNATRPGGKVCLIGLAKTEMTVAL-----T-PAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGF 336 (361)
Q Consensus 263 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l 336 (361)
......+..++++|+++.+|.......... . ....+.+.........+.+.+++++++++.+ .+..++.|++
T Consensus 221 ~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 298 (319)
T cd08267 221 FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPL 298 (319)
T ss_pred HHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeeeeEEcH
Confidence 233444445999999999986543221111 1 1111222222111115678889999999988 4456788888
Q ss_pred ChhhHHHHHHHHhcCCCceEEEE
Q 018075 337 TQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 337 ~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
++++++++.+.++...+|+++
T Consensus 299 --~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 299 --EDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred --HHHHHHHHHHhcCCCCCcEeC
Confidence 999999999998888888874
No 120
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=8.5e-30 Score=232.77 Aligned_cols=304 Identities=30% Similarity=0.490 Sum_probs=239.0
Q ss_pred eEEEEee---CCceEEEEecCCCCC-CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075 16 MAAWLLG---IKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91 (361)
Q Consensus 16 ~~~~~~~---~~~l~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (361)
+++++.. +..+++.+.+ |.+. +++++|++.++++|++|+....|.... ....|+++|+|++|+|+.+|+++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~ 78 (323)
T cd08241 2 KAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVTG 78 (323)
T ss_pred eEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCCC
Confidence 4556552 3567888877 7665 599999999999999999877654311 1234778999999999999999999
Q ss_pred CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075 92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA 170 (361)
Q Consensus 92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~ 170 (361)
+++||+|++.+ ..|+|++|+.++.+.++++|+++++.+++.+ .++.+|+.+
T Consensus 79 ~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~ 130 (323)
T cd08241 79 FKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHA 130 (323)
T ss_pred CCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 99999999631 2589999999999999999999998887744 578889988
Q ss_pred HH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 171 CR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 171 l~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
+. ...++++++++|+|+ |++|++++++++..|+ .++.++.+.++.+.++++|++..+... ..++.+.+.... .
T Consensus 131 ~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~ 205 (323)
T cd08241 131 LVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYR--DPDLRERVKALT--G 205 (323)
T ss_pred HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecC--CccHHHHHHHHc--C
Confidence 86 478999999999995 9999999999999999 578888888899999999987766532 234545544432 3
Q ss_pred CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC----------CCcHHHHHH
Q 018075 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY----------RSTWPLCIE 317 (361)
Q Consensus 249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~ 317 (361)
+.++|++++++|+. .....+++++++|+++.++....... +.......++.++.+.... .+.+.++++
T Consensus 206 ~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
T cd08241 206 GRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFD 284 (323)
T ss_pred CCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHH
Confidence 46799999999974 88999999999999999986543222 2233445677888776532 245678899
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360 (361)
Q Consensus 318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~ 360 (361)
++.++.+ .+..++.|++ ++++++++.+.++...+|++++
T Consensus 285 ~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 285 LLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence 9999988 4446677888 9999999999988888898864
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-29 Score=232.78 Aligned_cols=296 Identities=26% Similarity=0.380 Sum_probs=231.3
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075 24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG 103 (361)
Q Consensus 24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 103 (361)
..+.+++.+.|.+.+++|+|++.++++|++|+....|.... .+..|.++|+|++|+|+.+|+++.++++||+|++.
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~-- 87 (337)
T cd08275 12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL-- 87 (337)
T ss_pred cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEe--
Confidence 46888888888889999999999999999999887664321 13457789999999999999999999999999963
Q ss_pred cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075 104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN 181 (361)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~ 181 (361)
...|+|++|+.++.+.++++|+++++.+++.+ .++.+||+++.. .++++|++
T Consensus 88 --------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 141 (337)
T cd08275 88 --------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQS 141 (337)
T ss_pred --------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCE
Confidence 12589999999999999999999998888755 478889999754 88999999
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEEe-CChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075 182 VMIMGS-GPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259 (361)
Q Consensus 182 vlI~G~-g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 259 (361)
|+|+|+ |++|++++++|+.. . .+.+++ .++++.+.++++|++.+++.. ..++...+.... +.++|+++|++
T Consensus 142 vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~d~v~~~~ 214 (337)
T cd08275 142 VLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYR--TQDYVEEVKKIS---PEGVDIVLDAL 214 (337)
T ss_pred EEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCC--CCcHHHHHHHHh---CCCceEEEECC
Confidence 999995 99999999999999 2 223332 345577888889987766533 245555554442 46899999999
Q ss_pred CChHHHHHHHHhhcCCCEEEEEccCCCCc--c---------------eechHhhhcCcEEEEeecC---------CCcHH
Q 018075 260 GFDKTMSTALNATRPGGKVCLIGLAKTEM--T---------------VALTPAAAREVDVIGIFRY---------RSTWP 313 (361)
Q Consensus 260 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~---------------~~~~~~~~~~~~i~~~~~~---------~~~~~ 313 (361)
|+. .....+++++++|+++.+|...... . +.......++.++.++... ...+.
T Consensus 215 g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (337)
T cd08275 215 GGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD 293 (337)
T ss_pred cHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence 976 7899999999999999998543211 1 1112345677777776432 12366
Q ss_pred HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 314 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++++++.++.+ .+...+.|++ ++++++++.+.++...+|+++++
T Consensus 294 ~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 294 KLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 78889999988 4446677888 99999999999988889999874
No 122
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=5.1e-31 Score=254.90 Aligned_cols=314 Identities=19% Similarity=0.230 Sum_probs=247.8
Q ss_pred ccccccccCCcccceEEEEe----eC-CceEEEEecCC---CCCCCcEEEEEeeeecCcchhhhhcccccccccC----C
Q 018075 2 AEAIRDDEGDKNQNMAAWLL----GI-KTLKIQPYHLP---TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIV----K 69 (361)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~----~~-~~l~~~~~~~p---~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~----~ 69 (361)
|+...+..+......+|++. +. .+++|.|.|.. +..++.-+..|.|++||+.|+....|+...+..+ .
T Consensus 1400 RHl~le~~~~~~~~ehAfvntLtrGDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~ 1479 (2376)
T KOG1202|consen 1400 RHLKLEEDKPELPVEHAFVNTLTRGDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLAS 1479 (2376)
T ss_pred eeeEecccCCCcchHHHHHHHhhhccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccch
Confidence 44444444433344444443 33 68999998875 3477888999999999999999999987654332 5
Q ss_pred CCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEEC
Q 018075 70 KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 149 (361)
Q Consensus 70 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v 149 (361)
..+++|.||+|+ .+-|.||++. ..-.++++.+.++.++++.+
T Consensus 1480 qdclLGmEFsGR----------d~~GrRvM~m----------------------------vpAksLATt~l~~rd~lWev 1521 (2376)
T KOG1202|consen 1480 QDCLLGMEFSGR----------DASGRRVMGM----------------------------VPAKSLATTVLASRDFLWEV 1521 (2376)
T ss_pred hhheeceeeccc----------cCCCcEEEEe----------------------------eehhhhhhhhhcchhhhhhC
Confidence 678999999999 7889999973 33577899999999999999
Q ss_pred CCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----
Q 018075 150 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---- 222 (361)
Q Consensus 150 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~-G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---- 222 (361)
|.++.+++|+..+ .++|||++| .++..++|+++||| |+|++|++||.+|.+.|. .|+.+..++||++++.++
T Consensus 1522 P~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqL 1600 (2376)
T KOG1202|consen 1522 PSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQL 1600 (2376)
T ss_pred CcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhh
Confidence 9999999999776 689999998 56999999999999 589999999999999999 688888999999988763
Q ss_pred CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech-HhhhcCcE
Q 018075 223 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVD 301 (361)
Q Consensus 223 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~ 301 (361)
...++- ++.+.+|..-+. +.+.++|+|+|+++.... -++.+++||+.+|||..+|--+...+.++. ..+.++.+
T Consensus 1601 qe~~~~--NSRdtsFEq~vl--~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvs 1675 (2376)
T KOG1202|consen 1601 QETNFA--NSRDTSFEQHVL--WHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVS 1675 (2376)
T ss_pred hhhccc--ccccccHHHHHH--HHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccc
Confidence 233332 245567776664 445799999999999954 999999999999999999965544343443 46788999
Q ss_pred EEEeecC------CCcHHHHHHHHHcCCCC--CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 302 VIGIFRY------RSTWPLCIEFLRSGKID--VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 302 i~~~~~~------~~~~~~~~~~l~~g~~~--~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
++|.... .+.+.++..++++|.-. .+|+.+++|+- .++++|++.|.+|++.|||||++
T Consensus 1676 fHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1676 FHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred eeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence 9998653 44677777777766432 37777888877 99999999999999999999974
No 123
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=1.1e-28 Score=221.87 Aligned_cols=276 Identities=26% Similarity=0.344 Sum_probs=217.3
Q ss_pred CcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCC
Q 018075 39 QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN 118 (361)
Q Consensus 39 ~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~ 118 (361)
+||+||+.++++|++|++...|.. ...|.++|+|++|+|+++|+++.++++||+|++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~----------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL----------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence 589999999999999999876542 2457899999999999999999999999999863
Q ss_pred CCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHH
Q 018075 119 LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTL 195 (361)
Q Consensus 119 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai 195 (361)
..|+|++|+.++.+.++++|+++++.+++.+ .+..+++.++.. ..+++|++++|+| +|++|++++
T Consensus 59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~ 126 (293)
T cd05195 59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI 126 (293)
T ss_pred ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence 2589999999999999999999999888865 578888888754 7899999999997 699999999
Q ss_pred HHHHHcCCCEEEEEeCChhHHHHHHHcC--CCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhc
Q 018075 196 LAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 273 (361)
Q Consensus 196 ~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~ 273 (361)
++++..|+ .++.++.++++.+.+++++ ++..++.. ..++.+.+.+.. .+.++|++|+++++. .++..+++++
T Consensus 127 ~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 127 QLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcc
Confidence 99999999 5788888888888888888 56665532 234444444432 356899999999987 8999999999
Q ss_pred CCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC----------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhH
Q 018075 274 PGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI 341 (361)
Q Consensus 274 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~ 341 (361)
++|+++.+|..... ..+.... ..++..+...... .+.+..++++++++++ .+..+..+.+ +++
T Consensus 201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~ 275 (293)
T cd05195 201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--ASE 275 (293)
T ss_pred cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hhH
Confidence 99999999865432 1122211 2233444433211 2356788899999988 4555666788 999
Q ss_pred HHHHHHHhcCCCceEEEE
Q 018075 342 EDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 342 ~~a~~~l~~~~~~gkvvi 359 (361)
+++++.+.++...+|+++
T Consensus 276 ~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 276 IDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHHHHHhcCCCCceecC
Confidence 999999998888888764
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=2.3e-28 Score=219.09 Aligned_cols=246 Identities=28% Similarity=0.416 Sum_probs=196.3
Q ss_pred cCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCce
Q 018075 67 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 146 (361)
Q Consensus 67 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 146 (361)
+.++|.++|+|++|+|+++|++++++++||+|++ .++|++|++++.+.+
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~-------------------------------~~~~~~~~~v~~~~~ 65 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC-------------------------------FGPHAERVVVPANLL 65 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEe-------------------------------cCCcceEEEcCHHHe
Confidence 3468899999999999999999999999999986 246899999999999
Q ss_pred EECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-CC
Q 018075 147 YKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-AD 225 (361)
Q Consensus 147 ~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~ 225 (361)
+++|+++++++++.+.++.+||++++..++++|+++||+|+|++|++++++|+.+|+++++++++++++.++++++| ++
T Consensus 66 ~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~ 145 (277)
T cd08255 66 VPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPAD 145 (277)
T ss_pred eECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCc
Confidence 99999999988886677888999987788999999999999999999999999999965888989999999999999 44
Q ss_pred EEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEe
Q 018075 226 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI 305 (361)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~ 305 (361)
.+..... . . ..+.++|++||+++.....+..+++++++|+++.+|............+..+..++.+.
T Consensus 146 ~~~~~~~---~-------~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 213 (277)
T cd08255 146 PVAADTA---D-------E--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSS 213 (277)
T ss_pred cccccch---h-------h--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEee
Confidence 4433211 0 1 13568999999988777889999999999999999865433111112234445555554
Q ss_pred ecC-------------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEE
Q 018075 306 FRY-------------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMF 359 (361)
Q Consensus 306 ~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~-~~~gkvvi 359 (361)
... .+.+++++++++++.+ .+.+.+.+++ ++++++++.+.++ +...|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 214 QVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence 422 2568899999999997 4445677788 9999999999877 55677663
No 125
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=6.8e-28 Score=216.46 Aligned_cols=271 Identities=27% Similarity=0.391 Sum_probs=212.0
Q ss_pred EEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCC
Q 018075 43 VRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 122 (361)
Q Consensus 43 V~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 122 (361)
|||.++++|++|++...|.. ..|.++|+|++|+|+++|++++.+++||+|++.
T Consensus 2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------
Confidence 89999999999999876532 236789999999999999999999999999863
Q ss_pred ccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHH
Q 018075 123 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAAR 199 (361)
Q Consensus 123 ~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G-~g~~G~~ai~la~ 199 (361)
..|+|++|+.++.+.++++|+++++.+++.+. .+.+++.++ +...+++|++|+|+| +|++|++++++++
T Consensus 55 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~ 126 (288)
T smart00829 55 --------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQ 126 (288)
T ss_pred --------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHH
Confidence 25899999999999999999999998888664 778888887 448899999999998 6999999999999
Q ss_pred HcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 018075 200 AFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 277 (361)
Q Consensus 200 ~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~ 277 (361)
..|+ .++.++.++++.+.++++|+ +..+++. ..++.+.+.... .++++|+++|++++ ......+++++++|+
T Consensus 127 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~ 200 (288)
T smart00829 127 HLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGR 200 (288)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcE
Confidence 9999 58888888999999999998 5665532 234444443332 34679999999996 488999999999999
Q ss_pred EEEEccCCCC--cceechHhhhcCcEEEEeecC---------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHH
Q 018075 278 VCLIGLAKTE--MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346 (361)
Q Consensus 278 ~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~ 346 (361)
++.+|..... ...+... +.++..+.+.... .+.+..++++++++++.+ ...+.|++ ++++++++
T Consensus 201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~ 275 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI--SDVEDAFR 275 (288)
T ss_pred EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH--HHHHHHHH
Confidence 9999865321 1222222 2344444443211 234667888999998843 34567888 99999999
Q ss_pred HHhcCCCceEEEE
Q 018075 347 ISAQGGNAIKVMF 359 (361)
Q Consensus 347 ~l~~~~~~gkvvi 359 (361)
.+..+...+|+++
T Consensus 276 ~~~~~~~~~~ivv 288 (288)
T smart00829 276 YMQQGKHIGKVVL 288 (288)
T ss_pred HHhcCCCcceEeC
Confidence 9998877778764
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.95 E-value=5.4e-26 Score=193.21 Aligned_cols=293 Identities=16% Similarity=0.197 Sum_probs=223.1
Q ss_pred CceEEE--EecCC-CCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccC----cceeEEEEEeCCCCCCCCCCC
Q 018075 24 KTLKIQ--PYHLP-TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG----HECAGIIEEVGSEVKSLEVGD 96 (361)
Q Consensus 24 ~~l~~~--~~~~p-~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd 96 (361)
+.+.++ +++.+ ++++++||||..|.+..|...-.+.-..... .-.|+.+| ..++|+|++. +-+++++||
T Consensus 20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD 95 (343)
T KOG1196|consen 20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGD 95 (343)
T ss_pred ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCc
Confidence 344444 34443 4699999999999999998865543222111 12333343 3788999995 556799999
Q ss_pred EEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCc--eEECCC--CCCc--ccccccchhHHHHHH
Q 018075 97 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYKLPD--NVSL--EEGAMCEPLSVGVHA 170 (361)
Q Consensus 97 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~vP~--~~~~--~~aa~~~~~~~a~~~ 170 (361)
.|+.. -+|.||.++++.. .+++|. ++++ -..++-++..|||..
T Consensus 96 ~v~g~-------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~G 144 (343)
T KOG1196|consen 96 LVWGI-------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAG 144 (343)
T ss_pred eEEEe-------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHH
Confidence 99862 2799999998754 444443 3333 333444789999999
Q ss_pred HHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhh
Q 018075 171 CRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 171 l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
+.. ..+++|++|+|-| +|++|+.+.|+||.+|. .||+...++||.++++. ||.+..++|.+. .+..+++++.
T Consensus 145 f~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~--- 219 (343)
T KOG1196|consen 145 FYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC--- 219 (343)
T ss_pred HHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh---
Confidence 865 8899999999998 69999999999999999 89999999999998866 699999998653 3666666553
Q ss_pred cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC---ccee---chHhhhcCcEEEEeecC------CCcHHHH
Q 018075 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---MTVA---LTPAAAREVDVIGIFRY------RSTWPLC 315 (361)
Q Consensus 248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~ 315 (361)
.+.|+|+.||.+|+. .++..+..|+..||++.+|+.+.. .+.. +...+.+++.+.++... .+.+..+
T Consensus 220 ~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l 298 (343)
T KOG1196|consen 220 FPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFL 298 (343)
T ss_pred CCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHH
Confidence 588999999999987 999999999999999999976521 1211 24467889999887543 5677889
Q ss_pred HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361 (361)
Q Consensus 316 ~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~ 361 (361)
..++++|++.....+.. +| +..+.||.-|-+|+..||.++.+
T Consensus 299 ~~~ikegKI~y~edi~~--Gl--en~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 299 LPYIKEGKITYVEDIAD--GL--ENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred HHHHhcCceEEehhHHH--HH--hccHHHHHHHhccCcccceEEEe
Confidence 99999999966555542 47 99999999999999999998864
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.88 E-value=7.3e-23 Score=156.53 Aligned_cols=109 Identities=39% Similarity=0.745 Sum_probs=96.3
Q ss_pred CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCC
Q 018075 38 PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 117 (361)
Q Consensus 38 ~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~ 117 (361)
|+||+|||+++|||++|++.++|. .......|+++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+.+
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 689999999999999999999874 223358899999999999999999999999999999988888999999999999
Q ss_pred CCCCCccccCCCCCCCceeEEEEecCCceEEC
Q 018075 118 NLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 149 (361)
Q Consensus 118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v 149 (361)
.+|++...++.. ..|+|+||+.+++++++|+
T Consensus 79 ~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence 999998877754 7999999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.71 E-value=2.9e-16 Score=124.07 Aligned_cols=128 Identities=28% Similarity=0.557 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHH
Q 018075 189 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 268 (361)
Q Consensus 189 ~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~ 268 (361)
++|++++|+||..|+ .|++++++++|+++++++|++.+++++. .++.+.++++. .+.++|+||||+|.+..++..
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--ccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence 689999999999996 8999999999999999999999988654 45777777664 246899999999988899999
Q ss_pred HHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHc
Q 018075 269 LNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS 321 (361)
Q Consensus 269 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~ 321 (361)
+++++++|+++.+|... ...+++...++.+++++.+++.+ +++++++++++.+
T Consensus 76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 99999999999999887 66678888899999999999988 4889999988764
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.43 E-value=8.8e-12 Score=115.46 Aligned_cols=172 Identities=19% Similarity=0.296 Sum_probs=134.9
Q ss_pred HHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075 167 GVHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 167 a~~~l~~-~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 244 (361)
++.++.+ .+ ..+|++|+|+|+|++|+.+++.++.+|+ .|++++.++.|.+.++++|+... . ..+. +
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~---v 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEA---V 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHH---H
Confidence 3455533 33 4789999999999999999999999999 68889999999999999998432 1 1111 1
Q ss_pred HhhcCCCccEEEEccCChHHHHHH-HHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCC--cHH--HHHHHH
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMSTA-LNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS--TWP--LCIEFL 319 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~--~~~~~l 319 (361)
.++|+||++.|.+..+... ++.++++|+++.+|.. ..+++...+..+.+++.+...+.. .++ ..++++
T Consensus 256 -----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LL 328 (413)
T cd00401 256 -----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILL 328 (413)
T ss_pred -----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhh
Confidence 3689999999988777765 9999999999999855 346777778888999999887732 455 799999
Q ss_pred HcCCC-CCCCceEEE-----ecCChh-hHHHHHHHHhcCCC-ceEEEE
Q 018075 320 RSGKI-DVKPLITHR-----FGFTQK-EIEDAFEISAQGGN-AIKVMF 359 (361)
Q Consensus 320 ~~g~~-~~~~~~~~~-----~~l~~~-~~~~a~~~l~~~~~-~gkvvi 359 (361)
++|++ ++...+.+. ++| + ++.++++.+.++.. ..|+++
T Consensus 329 a~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~ 374 (413)
T cd00401 329 AEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF 374 (413)
T ss_pred hCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence 99998 777777766 677 8 99999999887643 345554
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.43 E-value=3.7e-12 Score=120.89 Aligned_cols=155 Identities=16% Similarity=0.230 Sum_probs=114.8
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCc-----------cchhHHHHH
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDI-----------EDVDTDVGK 243 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~-----------~~~~~~~~~ 243 (361)
..++++|+|+|+|++|+++++.|+.+|+ .|+++|.++++++.++++|++.+ ++..+.. .++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 79999999999999999999854 3321110 122222222
Q ss_pred HHhhcCCCccEEEEccCChH-----H-HHHHHHhhcCCCEEEEEccC-CCC--cceechHhhh-cCcEEEEeecCCCcHH
Q 018075 244 IQNAMGSGIDVSFDCVGFDK-----T-MSTALNATRPGGKVCLIGLA-KTE--MTVALTPAAA-REVDVIGIFRYRSTWP 313 (361)
Q Consensus 244 ~~~~~~~~~d~vld~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~ 313 (361)
.......++|+||+|++.+. . .++.++.+++||+++.++.. ++. .+.+...++. +++++.|.++.+..+.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p 320 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP 320 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence 11111257999999999643 4 59999999999999999974 332 3333445554 8999999888766665
Q ss_pred -HHHHHHHcCCCCCCCceE
Q 018075 314 -LCIEFLRSGKIDVKPLIT 331 (361)
Q Consensus 314 -~~~~~l~~g~~~~~~~~~ 331 (361)
++.+++.++.+++.+.++
T Consensus 321 ~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 321 TQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHhCCccHHHHhc
Confidence 599999999886555554
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.30 E-value=2e-12 Score=101.59 Aligned_cols=117 Identities=29% Similarity=0.392 Sum_probs=77.4
Q ss_pred cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC--ChHHHHHHHHhhcCCCEEEEEccCCCCcceechHh--hh
Q 018075 222 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG--FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA--AA 297 (361)
Q Consensus 222 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~--~~ 297 (361)
||++++++|.. .++ ..+.++|+|||++| ++..+..++++| ++|+++.++. ....... ..
T Consensus 1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence 68999998763 333 23679999999999 653446777888 9999999873 1001111 11
Q ss_pred cCcEEEEeec------CCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075 298 REVDVIGIFR------YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359 (361)
Q Consensus 298 ~~~~i~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi 359 (361)
...+...... ..+.++++.+++++|++ ++.+.++|+| +++.+|++.+++++..||+|+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence 1222222221 13459999999999999 8888899999 999999999999999999986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.74 E-value=1.5e-07 Score=84.01 Aligned_cols=172 Identities=17% Similarity=0.249 Sum_probs=106.6
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhh
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
...+++|++||.+|+|+ |..++++++..|.. .|++++.+++..+.+++. +...+.... .++ ..+. .
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d~----~~l~-~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GEI----EALP-V 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cch----hhCC-C
Confidence 35789999999999988 98888888888764 699999999988888764 332221111 121 1111 1
Q ss_pred cCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEe-ecCCCcHHHHHHHHH
Q 018075 248 MGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI-FRYRSTWPLCIEFLR 320 (361)
Q Consensus 248 ~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~l~ 320 (361)
....||+|+... +....++.+.+.|+|||+++..+..... ..+ ....+...+.+. ........+..++++
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~ 219 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLA 219 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence 235799998643 2345799999999999999987754322 111 111111111111 112345667778888
Q ss_pred cCCC-CCCCceEEEecCChhhHHHHHHHH--hcCCCceEEE
Q 018075 321 SGKI-DVKPLITHRFGFTQKEIEDAFEIS--AQGGNAIKVM 358 (361)
Q Consensus 321 ~g~~-~~~~~~~~~~~l~~~~~~~a~~~l--~~~~~~gkvv 358 (361)
+..+ .......+.+.+ ++..++++.+ ..+...++.+
T Consensus 220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence 7544 223333345667 8888999888 5554444444
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.63 E-value=5e-07 Score=85.99 Aligned_cols=108 Identities=17% Similarity=0.248 Sum_probs=80.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC------------ccchhHHHHHH
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD------------IEDVDTDVGKI 244 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~------------~~~~~~~~~~~ 244 (361)
.++++|+|+|+|.+|+++++.++.+|+ .|++.+.+.++++.++++|++.+..-... ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 58899999999999999998763221100 01222222222
Q ss_pred HhhcCCCccEEEEcc---CChH---HHHHHHHhhcCCCEEEEEccCC
Q 018075 245 QNAMGSGIDVSFDCV---GFDK---TMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 245 ~~~~~~~~d~vld~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
......++|++|+|+ |.+. ..++.++.|++|+.++.+....
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~ 287 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ 287 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence 222246799999999 5443 6788899999999999987543
No 134
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.54 E-value=3.6e-06 Score=74.02 Aligned_cols=136 Identities=20% Similarity=0.292 Sum_probs=87.7
Q ss_pred ceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
+|.+|.. +...++++++++++..+... +.......+.. .++++++||-+|||. |..++.+++ .|+..++++|.++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~ 152 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHP-TTRLCLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDP 152 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCH-HHHHHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCH
Confidence 4555544 66788999999998876522 22222333332 257899999999988 888876555 6776799999999
Q ss_pred hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEccCC
Q 018075 214 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 214 ~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
...+.+++.-....+. ..-. +.. +...||+|+.+.... ..++.+.+.|+|||+++..|...
T Consensus 153 ~~l~~A~~n~~~~~~~---~~~~-------~~~-~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~ 216 (250)
T PRK00517 153 QAVEAARENAELNGVE---LNVY-------LPQ-GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE 216 (250)
T ss_pred HHHHHHHHHHHHcCCC---ceEE-------Ecc-CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence 9888776632111000 0000 000 012699999766533 24567888999999999876543
No 135
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.47 E-value=1.9e-06 Score=71.83 Aligned_cols=106 Identities=16% Similarity=0.213 Sum_probs=80.3
Q ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh----HHHHHHHcCCCEEeecCCCccchhHHH
Q 018075 166 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ----RLSIARNLGADETAKVSTDIEDVDTDV 241 (361)
Q Consensus 166 ~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg~~~~~~~~~~~~~~~~~~ 241 (361)
....+++...+++|++||-+|+|. |+.++-+++..+ +|+++++.++ ....++.+|..++..... |-...+
T Consensus 60 ~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g---DG~~G~ 133 (209)
T COG2518 60 MVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHG---DGSKGW 133 (209)
T ss_pred HHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC---CcccCC
Confidence 334456778899999999999988 999999999998 6999999887 444467788865443322 211111
Q ss_pred HHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075 242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 242 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
. ...+||.++-+.+.+..-+.+++.|++||+++..-
T Consensus 134 ~-----~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv 169 (209)
T COG2518 134 P-----EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV 169 (209)
T ss_pred C-----CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence 1 13689999998888877789999999999999853
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.32 E-value=1.1e-05 Score=75.34 Aligned_cols=103 Identities=23% Similarity=0.270 Sum_probs=79.2
Q ss_pred HHHHHHhc-CCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075 167 GVHACRRA-NVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 167 a~~~l~~~-~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 244 (361)
+|.++.+. ++. .|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. . +.. +.
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~v-~-------~l~----ea 264 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFRV-M-------TME----EA 264 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCEe-c-------CHH----HH
Confidence 45666553 554 89999999999999999999999999 6888988888876666667542 1 111 12
Q ss_pred HhhcCCCccEEEEccCChHHHH-HHHHhhcCCCEEEEEccCCC
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 286 (361)
. .++|+++++.|....+. ..+..+++++.++.+|....
T Consensus 265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 1 36999999999876665 68899999999998886653
No 137
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.31 E-value=2.8e-06 Score=77.19 Aligned_cols=108 Identities=20% Similarity=0.302 Sum_probs=81.6
Q ss_pred CceEECCCCCCcccccccchhHHHHHHHHhcCC----CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HH
Q 018075 144 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV----GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SI 218 (361)
Q Consensus 144 ~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~----~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~ 218 (361)
...+++|+.+..+.++...+.+.++.+++.+.. .++.+|+|+|+|.+|..+++.++..|...|+.++++.++. ++
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 457788999999988877788888877755332 4799999999999999999999988887888898988764 78
Q ss_pred HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHH
Q 018075 219 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 264 (361)
Q Consensus 219 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~ 264 (361)
++++|.. ...+ .+..+. + ..+|+||.+++.+..
T Consensus 219 a~~~g~~-~~~~----~~~~~~---l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL----DELLEL---L-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH----HHHHHH---H-----hcCCEEEECCCCCch
Confidence 8888873 2221 111111 1 358999999998743
No 138
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.31 E-value=3.3e-05 Score=69.54 Aligned_cols=113 Identities=15% Similarity=0.211 Sum_probs=83.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.+.+++|+|.|.+|..+++.++.+|+ .|.+.+++.++.+.++++|+..+. + .+ +.+. -.++|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~~-~----~~----l~~~----l~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPFH-L----SE----LAEE----VGKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeeec-H----HH----HHHH----hCCCCEEEE
Confidence 68999999999999999999999999 788888998888888888875421 1 11 1111 247999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEee
Q 018075 258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 306 (361)
Q Consensus 258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~ 306 (361)
+++..-.....++.+++++.++.+....+...+ .....++++..+..
T Consensus 217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~~ 263 (296)
T PRK08306 217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLAP 263 (296)
T ss_pred CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEEC
Confidence 988654556778899999999988866554443 23334555555443
No 139
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.15 E-value=5.5e-05 Score=70.41 Aligned_cols=102 Identities=24% Similarity=0.270 Sum_probs=77.7
Q ss_pred HHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075 167 GVHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 167 a~~~l~~-~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 244 (361)
++.++.+ .+ ...|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. . +..+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~v-~-------~leeal--- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFRV-M-------TMEEAA--- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCEe-C-------CHHHHH---
Confidence 3444433 33 4789999999999999999999999999 6888988888877777777632 1 111111
Q ss_pred HhhcCCCccEEEEccCChHHHHH-HHHhhcCCCEEEEEccCC
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMST-ALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 285 (361)
.+.|++|++.|....+.. .+..+++++.++.+|...
T Consensus 249 -----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 -----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred -----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 357999999998866664 889999999999888654
No 140
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.02 E-value=3.3e-07 Score=86.51 Aligned_cols=158 Identities=19% Similarity=0.251 Sum_probs=101.2
Q ss_pred ccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEE---C
Q 018075 73 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK---L 149 (361)
Q Consensus 73 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---v 149 (361)
.-|.|+++.+.+|++++++ +|++.+.. ||+|..|+. .|.+....+ ...++.|++++.+.. .+.. +
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a~~----~a~~~~~~g-~~l~~lf~~a~~~~k-~vr~~t~i 156 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNAYK----VAQEEKTVG-KVLERLFQKAFSVGK-RVRTETDI 156 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHHHH----HHHHcCCch-HHHHHHHHHHHHHhh-hhhhhcCC
Confidence 5789999999999999876 55555555 788887732 233222222 134677888877665 2221 2
Q ss_pred -CCCCCcccccccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCE
Q 018075 150 -PDNVSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADE 226 (361)
Q Consensus 150 -P~~~~~~~aa~~~~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~ 226 (361)
+..++. ...|.... +.....++++|+|+|+|.+|..+++.++..|+..|++++++.++. ++++++|...
T Consensus 157 ~~~~vSv--------~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~ 228 (417)
T TIGR01035 157 SAGAVSI--------SSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA 228 (417)
T ss_pred CCCCcCH--------HHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE
Confidence 111221 11122222 234457889999999999999999999999976888888888774 4777787642
Q ss_pred EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075 227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 263 (361)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 263 (361)
+.+ .+.. +. -.++|+||+|++.+.
T Consensus 229 -i~~----~~l~----~~----l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 229 -VKF----EDLE----EY----LAEADIVISSTGAPH 252 (417)
T ss_pred -eeH----HHHH----HH----HhhCCEEEECCCCCC
Confidence 221 1111 11 136999999998764
No 141
>PLN02494 adenosylhomocysteinase
Probab=97.96 E-value=0.00014 Score=68.43 Aligned_cols=101 Identities=25% Similarity=0.273 Sum_probs=77.7
Q ss_pred HHHHHh-cCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075 168 VHACRR-ANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 168 ~~~l~~-~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+.++.+ .++ -.|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+... +..+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leEal---- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLEDVV---- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHHHH----
Confidence 455533 333 679999999999999999999999999 68889888877666766776421 111221
Q ss_pred hhcCCCccEEEEccCChHH-HHHHHHhhcCCCEEEEEccCC
Q 018075 246 NAMGSGIDVSFDCVGFDKT-MSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 285 (361)
...|+++++.|.... ....++.|++++.++.+|...
T Consensus 308 ----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 308 ----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred ----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 358999999998754 488999999999999998754
No 142
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.94 E-value=8e-05 Score=66.90 Aligned_cols=128 Identities=18% Similarity=0.257 Sum_probs=79.8
Q ss_pred CCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc
Q 018075 143 AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 222 (361)
Q Consensus 143 ~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l 222 (361)
....+.+.+++.+....- ++.......+... .+++++||-+|||. |..++.+++ .|+..+++++.++...+.+++.
T Consensus 126 ~~~~i~ldpg~aFgtG~h-~tt~l~l~~l~~~-~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n 201 (288)
T TIGR00406 126 DALIIMLDPGLAFGTGTH-PTTSLCLEWLEDL-DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKN 201 (288)
T ss_pred CcEEEEECCCCcccCCCC-HHHHHHHHHHHhh-cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHH
Confidence 455667777766654322 1222223334332 46889999999988 888877776 5776899999999887776653
Q ss_pred ----CCCE-EeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEccC
Q 018075 223 ----GADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 223 ----g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
+... +..... +. ......+||+|+...... ..+..+.+.|+|||+++..|..
T Consensus 202 ~~~n~~~~~~~~~~~---~~-------~~~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 202 AELNQVSDRLQVKLI---YL-------EQPIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHcCCCcceEEEec---cc-------ccccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 2211 111111 10 001135799999865433 3566778999999999987654
No 143
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.92 E-value=0.00014 Score=64.40 Aligned_cols=141 Identities=19% Similarity=0.257 Sum_probs=87.5
Q ss_pred ceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
+|.+|..-....++++.+++.+-...-. +......++++ .+++|.+||=+|||+ |.++|..+| +|+.+++++|.++
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFGTG~Hp-TT~lcL~~Le~-~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp 195 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFGTGTHP-TTSLCLEALEK-LLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDP 195 (300)
T ss_pred CCccCCCCCCceEEEEccccccCCCCCh-hHHHHHHHHHH-hhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCH
Confidence 4555433334678888888876543211 11222333443 357999999999987 888887666 7887899999999
Q ss_pred hHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEccCCC
Q 018075 214 QRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 214 ~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~ 286 (361)
...+.+++ -+...... ........ .. .++.+|+|+-..=.. ...+++.+.++|+|++++.|....
T Consensus 196 ~AV~aa~eNa~~N~v~~~~~--~~~~~~~~---~~---~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 196 QAVEAARENARLNGVELLVQ--AKGFLLLE---VP---ENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHHHHHHHHHHcCCchhhh--cccccchh---hc---ccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 77666655 22321000 00001100 01 136899999876433 356677889999999999886543
No 144
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.91 E-value=0.00021 Score=58.41 Aligned_cols=102 Identities=22% Similarity=0.284 Sum_probs=73.1
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHh
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+....+++|+.++=+|||. |..++++++..-..+++++++++++.+.. ++||.+.+..... +..+.+.+
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~--- 99 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPD--- 99 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcC---
Confidence 3457889999888888766 66778888655555899999999887655 5588776554432 33333322
Q ss_pred hcCCCccEEEEccCCh--HHHHHHHHhhcCCCEEEEE
Q 018075 247 AMGSGIDVSFDCVGFD--KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~--~~~~~~~~~l~~~G~~v~~ 281 (361)
...+|.+|---|.. ..++.+|..|+++|++|.-
T Consensus 100 --~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 100 --LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred --CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 12699999755432 5788999999999999864
No 145
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.90 E-value=0.00012 Score=68.04 Aligned_cols=97 Identities=19% Similarity=0.354 Sum_probs=67.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
++.+|+|+|+|.+|+.+++.++.+|+ .|++++++.++.+.+. .++......+ . +. +.+.+. -.++|++|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~-~---~~-~~l~~~----l~~aDvVI 235 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRY-S---NA-YEIEDA----VKRADLLI 235 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEecc-C---CH-HHHHHH----HccCCEEE
Confidence 44669999999999999999999999 6888998888876654 4554321111 1 11 112222 14799999
Q ss_pred EccCC-----hH-HHHHHHHhhcCCCEEEEEccC
Q 018075 257 DCVGF-----DK-TMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 257 d~~g~-----~~-~~~~~~~~l~~~G~~v~~g~~ 284 (361)
++++. +. .....++.+++++.++.++..
T Consensus 236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecC
Confidence 99732 11 247788889999999998854
No 146
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.86 E-value=0.00027 Score=59.82 Aligned_cols=102 Identities=17% Similarity=0.310 Sum_probs=71.5
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHH----HcC-CCEEeecCCCccchhHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLG-ADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~ 244 (361)
+....+.++++||.+|+|. |..++.+++..+. ..+++++.+++..+.++ +++ .+.+.... .+..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~- 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT- 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-
Confidence 4557889999999999988 9999999988653 37999999998877654 356 33332221 222222222
Q ss_pred HhhcCCCccEEEEccCC---hHHHHHHHHhhcCCCEEEE
Q 018075 245 QNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCL 280 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~ 280 (361)
....+|.||...+. ...++.+.+.|+|+|+++.
T Consensus 108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 13579999985543 3467788899999999985
No 147
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.86 E-value=8.2e-05 Score=63.19 Aligned_cols=104 Identities=19% Similarity=0.270 Sum_probs=70.6
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHH----HHHHcCCCEEeecCCCccchhHHHHH
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLS----IARNLGADETAKVSTDIEDVDTDVGK 243 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~ 243 (361)
..++...+++|++||-+|+|. |+.++-+++..|.. .|++++..++-.+ .+++++.+.+..... +....+.
T Consensus 63 ~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g---dg~~g~~- 137 (209)
T PF01135_consen 63 RMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG---DGSEGWP- 137 (209)
T ss_dssp HHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----GGGTTG-
T ss_pred HHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc---chhhccc-
Confidence 355667899999999999887 89999999998854 5899998886444 344466654332222 2111111
Q ss_pred HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
...+||.++-+.+.+......++.|++||+++..
T Consensus 138 ----~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 138 ----EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp ----GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred ----cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 1357999999888887778899999999999984
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.84 E-value=4.1e-05 Score=72.61 Aligned_cols=159 Identities=18% Similarity=0.276 Sum_probs=98.3
Q ss_pred ccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCC
Q 018075 73 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152 (361)
Q Consensus 73 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~ 152 (361)
.-|+|+++.+.+|+++.++.-.|+.=+ |++|...+ ..|...+..+ ...++.|++. +++|+.
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~a~----~~a~~~g~~g-~~l~~lf~~a--------~~~~k~ 151 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKDAY----ALAQEAGTVG-TILNRLFQKA--------FSVAKR 151 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHHHH----HHHHHcCCch-HHHHHHHHHH--------HHHHhh
Confidence 479999999999999988754454322 33333111 0111111000 0112333332 344555
Q ss_pred CCcccccccchhHHHHHHHHhcC----CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE
Q 018075 153 VSLEEGAMCEPLSVGVHACRRAN----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET 227 (361)
Q Consensus 153 ~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~ 227 (361)
+..+.+..-.+.++++.+++.+. -.++++|+|+|+|.+|.++++.++..|+..+++++++.++.+ +++++|.. .
T Consensus 152 v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~ 230 (423)
T PRK00045 152 VRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-A 230 (423)
T ss_pred HhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-E
Confidence 55444444446677777775422 267899999999999999999999999877888888888754 77888853 2
Q ss_pred eecCCCccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075 228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 263 (361)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 263 (361)
+.+ .+. .+. -.++|+||+|++.+.
T Consensus 231 ~~~----~~~----~~~----l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 231 IPL----DEL----PEA----LAEADIVISSTGAPH 254 (423)
T ss_pred eeH----HHH----HHH----hccCCEEEECCCCCC
Confidence 221 111 111 146999999998763
No 149
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.79 E-value=0.0003 Score=63.03 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=71.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+++|+|.|.+|.+++..++.+|+ .|.+.++++++.+.+.+.|...+ . +. .+.+. -.++|+|++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~----l~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEK----VAEIDIVIN 215 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHH----hccCCEEEE
Confidence 57899999999999999999999999 68888888887777666665421 1 11 11122 247999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEEccCCCCcce
Q 018075 258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 290 (361)
Q Consensus 258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 290 (361)
+++..-.-...++.++++..++.++.......+
T Consensus 216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 987542235577888998888888765554333
No 150
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.75 E-value=2.5e-05 Score=77.05 Aligned_cols=81 Identities=21% Similarity=0.380 Sum_probs=57.1
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC---------------------hhHHHHHHHcCCCEEeecCCC
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---------------------VQRLSIARNLGADETAKVSTD 233 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~---------------------~~~~~~~~~lg~~~~~~~~~~ 233 (361)
..++|++|+|+|+|+.|+++++.++..|+ .|++++.. +.+.+.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 47777642 346677888998755432110
Q ss_pred ccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075 234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 263 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~ 263 (361)
.+.. ...+ ..++|+||+++|...
T Consensus 212 -~~~~--~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 -EDIT--LEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred -CcCC--HHHH----HhhCCEEEEeeCCCC
Confidence 1211 1112 236999999999763
No 151
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.75 E-value=0.00011 Score=65.54 Aligned_cols=139 Identities=21% Similarity=0.367 Sum_probs=81.7
Q ss_pred ceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 134 ~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
+|.++-..+.+.++.+.+++.|-..--. +...+...++.. .++|++||=+|+|+ |.+++.-++ +|+..|+++|.++
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp 194 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDP 194 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSC
T ss_pred CCcccCCCCCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCH
Confidence 3455522355677888888877554322 222233444443 68899999999766 666666555 6998999999999
Q ss_pred hHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChH---HHHHHHHhhcCCCEEEEEccCCC
Q 018075 214 QRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK---TMSTALNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 214 ~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 286 (361)
...+.+++ -|....+.... ..+. ...+||+|+-..-.+- ....+.+.|+++|.+++.|....
T Consensus 195 ~Av~~a~~N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 195 LAVEAARENAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp HHHHHHHHHHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred HHHHHHHHHHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 87666654 23322221111 1111 1368999998877552 34445567899999999886654
Q ss_pred C
Q 018075 287 E 287 (361)
Q Consensus 287 ~ 287 (361)
.
T Consensus 264 ~ 264 (295)
T PF06325_consen 264 Q 264 (295)
T ss_dssp G
T ss_pred H
Confidence 3
No 152
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.73 E-value=0.00052 Score=62.26 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=73.5
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHH
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~ 244 (361)
.++...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+...
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~-- 145 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVP-- 145 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhccc--
Confidence 34556789999999999985 9999999998864 26899999998665554 46665443322 22222111
Q ss_pred HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
....+|+|+.+.+........++.|+++|+++..
T Consensus 146 ---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 146 ---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 1246999999888765667788999999998874
No 153
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.72 E-value=0.001 Score=56.99 Aligned_cols=103 Identities=15% Similarity=0.225 Sum_probs=71.1
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHH
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 244 (361)
.+...++++|++||-+|+|. |..++.+++..+. ..|++++.+++-.+.+++ .|...+..... +.....
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g---d~~~~~--- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG---DGTLGY--- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccCC---
Confidence 44557789999999999877 7788888888763 379999999987766654 34432221111 111110
Q ss_pred HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
....+||+|+-+.......+.+.+.|++||+++..
T Consensus 141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 01357999987655555778889999999999875
No 154
>PRK08324 short chain dehydrogenase; Validated
Probab=97.69 E-value=0.00042 Score=70.05 Aligned_cols=141 Identities=19% Similarity=0.270 Sum_probs=86.0
Q ss_pred CceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV 211 (361)
Q Consensus 133 g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~ 211 (361)
.++.+|..+++..++.+ +.++.++|.+.. .-.....+|+++||.| +|++|.+.++.+...|+ .|+.+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence 45667777777777766 666666664110 0012234689999998 69999999999999999 6888888
Q ss_pred ChhHHHHH-HHcCC--C-EEeecC-CCccchhHHHHHHHhhcCCCccEEEEccCCh------------------------
Q 018075 212 DVQRLSIA-RNLGA--D-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD------------------------ 262 (361)
Q Consensus 212 ~~~~~~~~-~~lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~------------------------ 262 (361)
+.++.+.+ ++++. . ..+..+ .+..+..+.+.++... .+++|++|++.|..
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 88765543 33443 1 111111 2222333333333322 34799999999821
Q ss_pred -HHHHHHHHhhcC---CCEEEEEccC
Q 018075 263 -KTMSTALNATRP---GGKVCLIGLA 284 (361)
Q Consensus 263 -~~~~~~~~~l~~---~G~~v~~g~~ 284 (361)
..++.+.+.++. +|+++.++..
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 123444555655 6899988754
No 155
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.61 E-value=0.00028 Score=53.53 Aligned_cols=93 Identities=24% Similarity=0.369 Sum_probs=63.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcC----C-CEEeecCCCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLG----A-DETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
||.+||-+|+|. |..++.+++. .++ ++++++.+++..+.+++.- . +.+.... .++ .. ......+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~----~~~~~~~ 70 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EF----DPDFLEP 70 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HG----GTTTSSC
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-cc----CcccCCC
Confidence 689999999887 8888888885 566 7999999999887776532 2 2222111 222 11 1112457
Q ss_pred ccEEEEcc-CC----h-----HHHHHHHHhhcCCCEEEE
Q 018075 252 IDVSFDCV-GF----D-----KTMSTALNATRPGGKVCL 280 (361)
Q Consensus 252 ~d~vld~~-g~----~-----~~~~~~~~~l~~~G~~v~ 280 (361)
||+|+... .. . ..++.+.+.|+|||+++.
T Consensus 71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi 109 (112)
T PF12847_consen 71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI 109 (112)
T ss_dssp EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 99999977 21 1 137889999999999986
No 156
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.59 E-value=0.002 Score=49.69 Aligned_cols=102 Identities=20% Similarity=0.281 Sum_probs=68.9
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
....+++++++|-+|+|. |..+..+++..+...+++++.++...+.+++ ++...+..... +.......
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~---- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED---- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence 445677889999999987 8889999998765579999999987766543 44433221111 11110111
Q ss_pred cCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEE
Q 018075 248 MGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 248 ~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~ 281 (361)
....+|+|+...+.. ..++.+.+.|+++|+++..
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 135799999765432 3688899999999999864
No 157
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.59 E-value=0.0012 Score=62.47 Aligned_cols=93 Identities=20% Similarity=0.286 Sum_probs=71.9
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.-.|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+... ++.+ +. ...|+|
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~lee----ll----~~ADIV 313 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------TLED----VV----ETADIF 313 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec--------cHHH----HH----hcCCEE
Confidence 4589999999999999999999999999 68888777776655555565321 1222 21 368999
Q ss_pred EEccCChHHHH-HHHHhhcCCCEEEEEccCC
Q 018075 256 FDCVGFDKTMS-TALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 256 ld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 285 (361)
+.+.|....+. ..+..|++++.++-+|...
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 99999875554 7999999999999988664
No 158
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.58 E-value=0.0017 Score=55.65 Aligned_cols=103 Identities=16% Similarity=0.173 Sum_probs=69.3
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHH
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~ 244 (361)
.++...++++++||-+|+|. |..++.+++..+. ..|++++.+++..+.+++ +|.+.+..... +......
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~~-- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGWE-- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCCc--
Confidence 34556789999999999877 7777888887653 259999999887665543 45443322211 1111110
Q ss_pred HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
...+||+|+-+.......+.+.+.|++||+++..
T Consensus 143 ---~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 ---PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ---ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 1357999886655455677888999999999875
No 159
>PRK14967 putative methyltransferase; Provisional
Probab=97.51 E-value=0.0023 Score=55.28 Aligned_cols=99 Identities=24% Similarity=0.355 Sum_probs=66.1
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+....++++++||-.|||. |..++.+++. +...+++++.+++..+.+++ .+....+. . .++.+. +
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~---~-- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARA---V-- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhh---c--
Confidence 4455678999999999988 8888888875 55579999999987775554 34322111 1 233221 1
Q ss_pred hcCCCccEEEEccCC---------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075 247 AMGSGIDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 247 ~~~~~~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~ 281 (361)
....||+|+...+- ...+..+.+.|++||+++.+
T Consensus 98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 13579999975210 11345677899999999865
No 160
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.50 E-value=0.00066 Score=53.60 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=53.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC--EEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
-++.++||+|+|+.|.+++..+...|++.+..+.++.+|.+ ++++++.. ..+.+. +..+ . -..+|
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~----~----~~~~D 77 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEE----A----LQEAD 77 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCH----H----HHTES
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHH----H----HhhCC
Confidence 46899999999999999999999999988999999988765 55566432 122221 2211 1 14699
Q ss_pred EEEEccCCh
Q 018075 254 VSFDCVGFD 262 (361)
Q Consensus 254 ~vld~~g~~ 262 (361)
+||+|++.+
T Consensus 78 ivI~aT~~~ 86 (135)
T PF01488_consen 78 IVINATPSG 86 (135)
T ss_dssp EEEE-SSTT
T ss_pred eEEEecCCC
Confidence 999998866
No 161
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.49 E-value=0.0036 Score=53.26 Aligned_cols=103 Identities=15% Similarity=0.198 Sum_probs=69.2
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHH
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGK 243 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~ 243 (361)
.++...++++++||-+|+|. |..++.+++..+ ...|++++.+++-.+.+++ .+... +.... .+..+.+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~---~d~~~~~~- 138 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYH---GDGKRGLE- 138 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE---CCcccCCc-
Confidence 34556789999999999877 778888888764 2379999999886655543 44321 11111 12111111
Q ss_pred HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
....||.|+-+.......+.+.+.|++||+++..
T Consensus 139 ----~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 139 ----KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred ----cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1357999988766555667888999999999874
No 162
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.31 E-value=0.0014 Score=58.17 Aligned_cols=99 Identities=21% Similarity=0.398 Sum_probs=60.4
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHh
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
++++++++|++||-+|||- |-.++.+|+..|+ .|++++.+++-.+.++ +.|...-+.+.. .++. ++
T Consensus 55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~-- 124 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL-- 124 (273)
T ss_dssp HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G---
T ss_pred HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc--
Confidence 4568999999999999874 7788889998899 7999999998776654 455332111111 1221 12
Q ss_pred hcCCCccEEEE-----ccCCh---HHHHHHHHhhcCCCEEEEE
Q 018075 247 AMGSGIDVSFD-----CVGFD---KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 247 ~~~~~~d~vld-----~~g~~---~~~~~~~~~l~~~G~~v~~ 281 (361)
..+||.|+. .+|.. ..++.+.+.|+|||+++.-
T Consensus 125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 238999865 44432 4578888999999999754
No 163
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.28 E-value=0.0029 Score=59.15 Aligned_cols=99 Identities=18% Similarity=0.292 Sum_probs=70.0
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
+..++++|++||.+|||. |..++.+++..|+ .|++++.+++..+.+++......+.+.. .++ ..+ ...
T Consensus 161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l----~~~ 228 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL----NGQ 228 (383)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc----CCC
Confidence 557889999999999865 7788889988888 7999999999998887754221111111 122 111 357
Q ss_pred ccEEEEc-----cCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075 252 IDVSFDC-----VGF---DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 252 ~d~vld~-----~g~---~~~~~~~~~~l~~~G~~v~~g 282 (361)
||.|+.. +|. +..++.+.+.|+|||+++...
T Consensus 229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9998753 332 246788889999999998754
No 164
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.27 E-value=0.0045 Score=54.55 Aligned_cols=103 Identities=18% Similarity=0.329 Sum_probs=71.8
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~ 245 (361)
++..+++||++||=+|||- |-+++-.|+..|+ .|++++.+++-.+.+++ .|.. .+-....+ .+.+
T Consensus 65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d-------~rd~- 134 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD-------YRDF- 134 (283)
T ss_pred HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------cccc-
Confidence 3568999999999999987 7888999999999 79999999987666554 5544 22111111 2222
Q ss_pred hhcCCCccEEEE-----ccCC---hHHHHHHHHhhcCCCEEEEEccCCC
Q 018075 246 NAMGSGIDVSFD-----CVGF---DKTMSTALNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 246 ~~~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~ 286 (361)
...||-|.. .+|. +.-+..+-+.|+|+|+++.-.....
T Consensus 135 ---~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~ 180 (283)
T COG2230 135 ---EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP 180 (283)
T ss_pred ---ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence 234887743 5554 2456778889999999988765443
No 165
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.23 E-value=0.05 Score=48.80 Aligned_cols=98 Identities=14% Similarity=0.222 Sum_probs=67.0
Q ss_pred CCCCCEEEEEC-CCHHHHHHHHHHH-HcCCCEEEEEeCChhHHHHHHHcCC-CEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 176 VGPETNVMIMG-SGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 176 ~~~g~~vlI~G-~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.-..+.|+|.+ ++-+++.++..++ ..+..++|++++. .+..+.+.+|+ +.++.|++ +.++ ....-
T Consensus 133 ~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~-~N~~Fve~lg~Yd~V~~Yd~--------i~~l---~~~~~ 200 (314)
T PF11017_consen 133 FFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSA-RNVAFVESLGCYDEVLTYDD--------IDSL---DAPQP 200 (314)
T ss_pred cCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecC-cchhhhhccCCceEEeehhh--------hhhc---cCCCC
Confidence 34446667777 5788888888887 5666589999664 45558899995 56666532 2222 23566
Q ss_pred cEEEEccCChHHHHHHHHhhcCCC-EEEEEccCC
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGG-KVCLIGLAK 285 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G-~~v~~g~~~ 285 (361)
-+++|..|.......+..+++..= ..+.+|...
T Consensus 201 ~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 201 VVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 789999999988888888887754 345566443
No 166
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.23 E-value=0.01 Score=50.87 Aligned_cols=82 Identities=26% Similarity=0.359 Sum_probs=56.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--CE--EeecCCCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--DE--TAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
+++.++|.| ++++|.+.++.....|+ +++.+.+..++++ ++.+++. .. ..++ .+..+....+..+.. .-+.
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~-~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPE-EFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHH-hhCc
Confidence 457788999 58999999999999999 6888888888876 5566773 12 2232 233344445554433 2357
Q ss_pred ccEEEEccCCh
Q 018075 252 IDVSFDCVGFD 262 (361)
Q Consensus 252 ~d~vld~~g~~ 262 (361)
+|+.++..|..
T Consensus 82 iDiLvNNAGl~ 92 (246)
T COG4221 82 IDILVNNAGLA 92 (246)
T ss_pred ccEEEecCCCC
Confidence 99999988754
No 167
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.23 E-value=0.011 Score=49.81 Aligned_cols=104 Identities=13% Similarity=0.280 Sum_probs=64.7
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+...+++++++||=+|+|. |..++.+++......+++++.+++..+.+++ ++...+.... .+..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~-- 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL-- 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC--
Confidence 3446778999999898765 5566677766543479999999987766654 5554332221 2222222111
Q ss_pred hcCCCccE-EEEccCC-hHHHHHHHHhhcCCCEEEEEc
Q 018075 247 AMGSGIDV-SFDCVGF-DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 247 ~~~~~~d~-vld~~g~-~~~~~~~~~~l~~~G~~v~~g 282 (361)
...+|. .++.... ...++.+.+.|+|||+++...
T Consensus 107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 122344 4443222 257888999999999998874
No 168
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.17 E-value=0.0051 Score=51.36 Aligned_cols=98 Identities=18% Similarity=0.250 Sum_probs=64.8
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
.++++.+||-+|||. |..++.+++......|++++.+++..+.+++ .+.+.+..... +..+ +.. ..
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~~----~~~--~~ 111 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAEE----FGQ--EE 111 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHhh----CCC--CC
Confidence 355689999999876 7777777776544479999999887665543 45443222211 2211 111 35
Q ss_pred CccEEEEccCC--hHHHHHHHHhhcCCCEEEEEc
Q 018075 251 GIDVSFDCVGF--DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 251 ~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g 282 (361)
.+|+|+..... +..++.+.+.|+|||+++.+-
T Consensus 112 ~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 112 KFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred CccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 79999974322 246778889999999999873
No 169
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.14 E-value=0.015 Score=50.47 Aligned_cols=105 Identities=19% Similarity=0.201 Sum_probs=66.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC---CCEEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG---ADETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
+++++||.| +|.+|..+++.+...|+ .|+.+++++++.+.+ +++. ....+..+ .+..+....+.+.... -.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 468999998 59999999999999999 577888877766544 3332 11222211 1222333333333221 246
Q ss_pred ccEEEEccCCh-----------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075 252 IDVSFDCVGFD-----------------------KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 252 ~d~vld~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
+|.++.+.+.. ...+...+.+..+|+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 89999988742 1244556667788999988754
No 170
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.12 E-value=0.0098 Score=51.36 Aligned_cols=108 Identities=19% Similarity=0.357 Sum_probs=76.4
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC----CEEeecCCCccchhHHHHHHHhh
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
.....++|++||=+|||. |-.|..+++..|-..|+++|-+++-++.+++--. .. +.+.. .+.. . +. .
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~dAe-~---LP-f 115 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GDAE-N---LP-F 115 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--echh-h---CC-C
Confidence 345666999999998776 8999999999986689999999998877765322 21 11111 1111 1 11 1
Q ss_pred cCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEccCCCCc
Q 018075 248 MGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKTEM 288 (361)
Q Consensus 248 ~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~~~ 288 (361)
....||+|..+.|-. ..+.++.|.|+|||+++.+.......
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~ 162 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN 162 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence 256799998766533 47889999999999999998776543
No 171
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.10 E-value=0.0054 Score=52.30 Aligned_cols=95 Identities=21% Similarity=0.299 Sum_probs=66.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE--eecCCCccchhHHHHHHHhhcCCCccE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
-+|.+||=+|||+ |.++.-+|+ +|+ .|.++|-+++..+.++.-..... ++|.. ..+.++.. .+..||+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FDv 127 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFDV 127 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCccE
Confidence 5899999999877 777777777 778 79999999999888875332221 22321 23333433 2478999
Q ss_pred EEE-----ccCChH-HHHHHHHhhcCCCEEEEE
Q 018075 255 SFD-----CVGFDK-TMSTALNATRPGGKVCLI 281 (361)
Q Consensus 255 vld-----~~g~~~-~~~~~~~~l~~~G~~v~~ 281 (361)
|+. .+..++ .+..+.+.++|+|.+..-
T Consensus 128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 976 455553 567788999999987654
No 172
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0055 Score=54.71 Aligned_cols=81 Identities=19% Similarity=0.233 Sum_probs=55.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+.+.+...+ .++ .+..+....+.++....++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDY-AEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccC-CCHHHHHHHHHHHHHHcCCCccEE
Confidence 467899998 59999999998888899 68888888887776666564432 232 222334444444433234579999
Q ss_pred EEccC
Q 018075 256 FDCVG 260 (361)
Q Consensus 256 ld~~g 260 (361)
+++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 173
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.08 E-value=0.011 Score=49.41 Aligned_cols=112 Identities=18% Similarity=0.273 Sum_probs=74.5
Q ss_pred CCCEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-S-GPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
....|||.| + |++|.+.+.-....|+ .|+++.++-++-. +..++|... -+++ +++++..+...++++...++.|
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence 346789998 3 8999999998888999 6888877777654 444788533 2333 3445566666666655567899
Q ss_pred EEEEccCCh----------HHHHHHH----------------HhhcCCCEEEEEccCCCCccee
Q 018075 254 VSFDCVGFD----------KTMSTAL----------------NATRPGGKVCLIGLAKTEMTVA 291 (361)
Q Consensus 254 ~vld~~g~~----------~~~~~~~----------------~~l~~~G~~v~~g~~~~~~~~~ 291 (361)
+.++..|.+ +..+..+ ...+..|++|.+|....-.+++
T Consensus 84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp 147 (289)
T KOG1209|consen 84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP 147 (289)
T ss_pred EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence 999988755 1111111 2346779999998765444433
No 174
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.05 E-value=0.013 Score=49.04 Aligned_cols=101 Identities=19% Similarity=0.277 Sum_probs=60.1
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
..+++|++||.+|+|+-+ .+..+++.. +...+++++.+++. ...+... +..+.........+.+. ....++
T Consensus 28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~-~~~d~~~~~~~~~l~~~--~~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDF-IRGDFTDEEVLNKIRER--VGDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceE-EEeeCCChhHHHHHHHH--hCCCCc
Confidence 567999999999988744 444445443 44479999998754 1123322 21111111111222221 134579
Q ss_pred cEEEEcc-----CC------------hHHHHHHHHhhcCCCEEEEEc
Q 018075 253 DVSFDCV-----GF------------DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 253 d~vld~~-----g~------------~~~~~~~~~~l~~~G~~v~~g 282 (361)
|+|+... |. ...++.+.+.|+|||+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999631 21 246777899999999998753
No 175
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=97.05 E-value=0.018 Score=49.21 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=65.7
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
.+...+++++++||-+|+|. |..+..+++.. . .+++++.+++..+.+++ ++...+..... +..+...
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~--- 140 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKGWP--- 140 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccCCC---
Confidence 34557789999999999865 55666666654 3 69999999877665544 34433211111 1111110
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
....||+|+.........+.+.+.|++||+++..-
T Consensus 141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 12579999876555556778889999999988653
No 176
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.01 E-value=0.019 Score=50.38 Aligned_cols=84 Identities=21% Similarity=0.278 Sum_probs=54.9
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCC----C-EEeecCC-CccchhHHHHHHHhhc
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA----D-ETAKVST-DIEDVDTDVGKIQNAM 248 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~----~-~~~~~~~-~~~~~~~~~~~~~~~~ 248 (361)
..+.++||.| ++++|...+..+...|. .++.+.++++|++.+ +++.- . .++..+- +..+......++ ...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l-~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL-KER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH-Hhc
Confidence 4678999999 58999999999988999 578888989887644 33432 1 2333221 222222222222 223
Q ss_pred CCCccEEEEccCCh
Q 018075 249 GSGIDVSFDCVGFD 262 (361)
Q Consensus 249 ~~~~d~vld~~g~~ 262 (361)
+..+|+.+++.|..
T Consensus 82 ~~~IdvLVNNAG~g 95 (265)
T COG0300 82 GGPIDVLVNNAGFG 95 (265)
T ss_pred CCcccEEEECCCcC
Confidence 45899999999865
No 177
>PRK12742 oxidoreductase; Provisional
Probab=97.01 E-value=0.013 Score=50.71 Aligned_cols=101 Identities=21% Similarity=0.298 Sum_probs=60.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
++.++||.| +|++|.+.++.+...|++ ++.+ .+++++. ++.++++...+ ..+. .+... +.+.... ..++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~-~~D~--~~~~~-~~~~~~~-~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATAV-QTDS--ADRDA-VIDVVRK-SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeEE-ecCC--CCHHH-HHHHHHH-hCCCcE
Confidence 478999998 599999999999889995 5544 3344443 34455565432 2221 22222 2222221 246999
Q ss_pred EEEccCChH-------------------------HHHHHHHhhcCCCEEEEEccC
Q 018075 255 SFDCVGFDK-------------------------TMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 255 vld~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 284 (361)
++++.|... ..+.+.+.+..+|+++.++..
T Consensus 79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 133 (237)
T PRK12742 79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV 133 (237)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 999987420 113444556678999988754
No 178
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.90 E-value=0.018 Score=49.60 Aligned_cols=106 Identities=23% Similarity=0.378 Sum_probs=73.9
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+...++.||++|+=.|+|+ |.+++-||+..|- -.|+..+..++..+.|++ +|..+.+.+. ..|..+..
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~Dv~~~~---- 159 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGDVREGI---- 159 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--eccccccc----
Confidence 4568899999999999877 8888899998875 579999999887776654 4543321111 12222111
Q ss_pred hhcCCCccEEE-EccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 246 NAMGSGIDVSF-DCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 246 ~~~~~~~d~vl-d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
.+..+|.++ |--.....++.+.+.|.|||.++++...-
T Consensus 160 --~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~v 198 (256)
T COG2519 160 --DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPTV 198 (256)
T ss_pred --cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCCH
Confidence 134788775 55444478999999999999999885443
No 179
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.90 E-value=0.0089 Score=49.60 Aligned_cols=90 Identities=21% Similarity=0.230 Sum_probs=62.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
-.|.+|.|+|.|.+|...+++++.+|+ +|++.+++..........+... .++.+.+ ...|+|+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell--------~~aDiv~ 96 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELL--------AQADIVS 96 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHH--------HH-SEEE
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhc--------chhhhhh
Confidence 368999999999999999999999999 7999988887766455555422 1333332 2488998
Q ss_pred EccCChH-----HHHHHHHhhcCCCEEEEEcc
Q 018075 257 DCVGFDK-----TMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 257 d~~g~~~-----~~~~~~~~l~~~G~~v~~g~ 283 (361)
.+..... .-.+.+..|+++..+|-++.
T Consensus 97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp E-SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred hhhccccccceeeeeeeeeccccceEEEeccc
Confidence 8776321 23456788888887776543
No 180
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.89 E-value=0.011 Score=54.60 Aligned_cols=96 Identities=15% Similarity=0.217 Sum_probs=63.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC---CCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
.+|||+|+|.+|+.+++.+...+-..|..++++.++...+.... .. ...++. .+... +.++. .++|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~--~d~~a-l~~li----~~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDA--ADVDA-LVALI----KDFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccce-eEEecc--cChHH-HHHHH----hcCCEEE
Confidence 47899999999999999988888447899999988887776653 22 122222 22222 22222 3569999
Q ss_pred EccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075 257 DCVGFDKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 257 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
++.+..-...-+-.++..|=.++....
T Consensus 74 n~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 74 NAAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred EeCCchhhHHHHHHHHHhCCCEEEccc
Confidence 999976444334456666666666553
No 181
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.88 E-value=0.023 Score=50.26 Aligned_cols=112 Identities=22% Similarity=0.262 Sum_probs=68.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCE-EeecC---CCccchhHHHHHHHhhc
Q 018075 178 PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADE-TAKVS---TDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 178 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~-~~~~~---~~~~~~~~~~~~~~~~~ 248 (361)
.|..|+|.|| +++|.+.+.-.-..|+..+.++ +..++. +.+++.+... ++.+. ++.++..+....+.. .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~-~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR-H 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH-h
Confidence 5788999995 8999888887777999644444 445444 4445555443 33222 223334334333322 3
Q ss_pred CCCccEEEEccCCh-------------------------HHHHHHHHhhcCC--CEEEEEccCCCCccee
Q 018075 249 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPG--GKVCLIGLAKTEMTVA 291 (361)
Q Consensus 249 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~ 291 (361)
-+++|+.+++.|-. ...+.++++|.+. |+++.++...+...++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 46899999988754 1345566666544 9999998665544433
No 182
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.83 E-value=0.026 Score=54.26 Aligned_cols=103 Identities=17% Similarity=0.273 Sum_probs=63.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh--hH-HHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QR-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
++.++||.| +|++|...++.+...|+ .++.++++. ++ .+..++++...+ .++ .+..+.......+.+. ..++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDI-TAPDAPARIAEHLAER-HGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHHh-CCCC
Confidence 578999998 59999999999888999 567776633 22 334445554332 232 2222333333333221 2479
Q ss_pred cEEEEccCCh----------HHHHHHHH-----------------hhcCCCEEEEEcc
Q 018075 253 DVSFDCVGFD----------KTMSTALN-----------------ATRPGGKVCLIGL 283 (361)
Q Consensus 253 d~vld~~g~~----------~~~~~~~~-----------------~l~~~G~~v~~g~ 283 (361)
|++|++.|.. +.++..++ .++++|+++.++.
T Consensus 286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS 343 (450)
T PRK08261 286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS 343 (450)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence 9999998832 23333333 4567799998874
No 183
>PRK08317 hypothetical protein; Provisional
Probab=96.81 E-value=0.017 Score=50.03 Aligned_cols=104 Identities=21% Similarity=0.301 Sum_probs=69.7
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcC---CCEEeecCCCccchhHHHHHHHh
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
++...++++++||.+|+|. |..+..+++..+ ...+++++.+++..+.+++.. ...+.....+..... +
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~-- 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-----F-- 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-----C--
Confidence 4557789999999999977 888889998873 347999999998888777651 111111111111110 1
Q ss_pred hcCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEcc
Q 018075 247 AMGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 247 ~~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
....+|+|+... .....+..+.+.|+|+|.++....
T Consensus 84 -~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 125 (241)
T PRK08317 84 -PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT 125 (241)
T ss_pred -CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence 135789887632 222478889999999999988753
No 184
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.80 E-value=0.0043 Score=50.97 Aligned_cols=100 Identities=19% Similarity=0.304 Sum_probs=66.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec-CCC--------------ccchhHHHH
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STD--------------IEDVDTDVG 242 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~-~~~--------------~~~~~~~~~ 242 (361)
+..+|+|.|+|.+|..|+.+++.+|+ .++..+...++.+..+..+...+... ... .........
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34789999999999999999999999 68999999988888888877554331 110 112222222
Q ss_pred HHHhhcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEc
Q 018075 243 KIQNAMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 243 ~~~~~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g 282 (361)
+.. ..+|++|.+.--+ -..++.++.|+++..++.+.
T Consensus 98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis 139 (168)
T PF01262_consen 98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS 139 (168)
T ss_dssp HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence 221 3589998633111 13566788899999888876
No 185
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.71 E-value=0.0086 Score=52.85 Aligned_cols=98 Identities=17% Similarity=0.318 Sum_probs=71.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
+..+|.|+|.|.+|.-++.+|.-+|+ .|...+.+.+|.+.++.+-...+..+.++...+.+.+ .+.|++|.
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIg 237 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIG 237 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEE
Confidence 34567788999999999999999999 5889999999998887744333332223222332222 47899998
Q ss_pred ccCCh------HHHHHHHHhhcCCCEEEEEccC
Q 018075 258 CVGFD------KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 258 ~~g~~------~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
++-.+ ...++.++.|.||+.++.+...
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiD 270 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAID 270 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence 66322 3678889999999999988643
No 186
>PLN03075 nicotianamine synthase; Provisional
Probab=96.69 E-value=0.011 Score=52.64 Aligned_cols=99 Identities=24% Similarity=0.277 Sum_probs=66.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcC-C----CEEeecCCCccchhHHHHHHHhhcCC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLG-A----DETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg-~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
.++++|+-+|+|+.++.++.+++.. ...+++.+|.+++..+.+++.- . ..-+.+.. .+..+ .. ....
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~-~~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VT-ESLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----cc-cccC
Confidence 4789999999999999888888655 3337999999999888887643 1 11111111 12111 10 0125
Q ss_pred CccEEEEcc-------CChHHHHHHHHhhcCCCEEEEEc
Q 018075 251 GIDVSFDCV-------GFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 251 ~~d~vld~~-------g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
+||+||-.+ .-...++.+.+.|+|||.++.=.
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 799998864 22247888999999999988654
No 187
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=96.69 E-value=0.027 Score=49.87 Aligned_cols=105 Identities=17% Similarity=0.243 Sum_probs=68.3
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcC-------CCEEeecCCCccchhHHHHH
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG-------ADETAKVSTDIEDVDTDVGK 243 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-------~~~~~~~~~~~~~~~~~~~~ 243 (361)
+...++++++||-+|||. |..+..+++..+. ..|+++|.+++-.+.+++.. ...+.....+..+
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------- 138 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------- 138 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc-------
Confidence 345678999999999876 6677788887652 27999999999887775421 1111111111111
Q ss_pred HHhhcCCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 244 IQNAMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 244 ~~~~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+. .....||.|+-+.+ -...++++.+.|+|||+++.+....
T Consensus 139 lp-~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~ 185 (261)
T PLN02233 139 LP-FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK 185 (261)
T ss_pred CC-CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence 10 11356999976432 1246889999999999999886554
No 188
>PRK01581 speE spermidine synthase; Validated
Probab=96.67 E-value=0.041 Score=50.44 Aligned_cols=98 Identities=16% Similarity=0.117 Sum_probs=65.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-----------CCEEeecCCCccchhHHHHHHH
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----------ADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----------~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
....+|||+|+|. |.++..+++..+...|++++.+++-.+.++++. ...+-.. ..|..+.++.
T Consensus 149 ~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL~~-- 222 (374)
T PRK01581 149 IDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFLSS-- 222 (374)
T ss_pred CCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHHHh--
Confidence 4457999999764 667778888766678999999999999988631 1111111 1233333332
Q ss_pred hhcCCCccEEEEccCCh-----------HHHHHHHHhhcCCCEEEEEc
Q 018075 246 NAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g 282 (361)
....||+||--...+ +.++.+.+.|+|+|.++.-.
T Consensus 223 --~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 223 --PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred --cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 246799998754322 35678889999999987753
No 189
>PRK04457 spermidine synthase; Provisional
Probab=96.67 E-value=0.028 Score=49.69 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=67.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CCC----EEeecCCCccchhHHHHHHHhhcCCC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GAD----ETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
.++.+||++|+|+ |..+..+++......+++++.+++-.+.+++. +.. .+... ..|..+.+.+. ...
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~~----~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAVH----RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHhC----CCC
Confidence 4567899999876 88888888887655799999999999988874 321 11111 13444444322 457
Q ss_pred ccEEEE-ccC---------ChHHHHHHHHhhcCCCEEEEE
Q 018075 252 IDVSFD-CVG---------FDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 252 ~d~vld-~~g---------~~~~~~~~~~~l~~~G~~v~~ 281 (361)
+|+|+- ... ..+.++.+.+.|+|+|.++.-
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 999973 211 135788899999999999873
No 190
>PRK04266 fibrillarin; Provisional
Probab=96.67 E-value=0.044 Score=47.28 Aligned_cols=104 Identities=11% Similarity=0.168 Sum_probs=63.7
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+...+++|++||=.|+|+ |..+..+++..+...|++++.+++..+.+.+... ..+.....+..+.. ....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~-~~~~l----~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE-RYAHV----V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc-hhhhc----c
Confidence 457899999999999765 5566677777653379999999976654332211 11111111111110 00011 2
Q ss_pred CCccEEEEccCChH----HHHHHHHhhcCCCEEEEE
Q 018075 250 SGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI 281 (361)
Q Consensus 250 ~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~ 281 (361)
..+|+++.....+. .++.+.+.|+|||+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 45999996554331 367888899999999984
No 191
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=96.65 E-value=0.033 Score=49.13 Aligned_cols=98 Identities=23% Similarity=0.301 Sum_probs=69.8
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
.+......++++||-+|||. |..+..+++.. +. .|++++.++.-.+.+++.+.+... .+.. ++. .
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~~----~~~--~ 86 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDVR----DWK--P 86 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cChh----hCC--C
Confidence 34556678899999999877 77888888876 45 799999999988888876644321 1221 111 1
Q ss_pred CCCccEEEEccC-----C-hHHHHHHHHhhcCCCEEEEE
Q 018075 249 GSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 249 ~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~ 281 (361)
...||+|+.... . ...+..+.+.|+|||+++..
T Consensus 87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 357999988442 1 34677889999999999875
No 192
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.65 E-value=0.015 Score=51.24 Aligned_cols=132 Identities=16% Similarity=0.239 Sum_probs=88.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC---------ccchhHHHHHHHh
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD---------IEDVDTDVGKIQN 246 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~---------~~~~~~~~~~~~~ 246 (361)
--++.++|+.|.|..|+.++..++..|+ .|..-+....+.+..+.+|+...-.-++. ++++...-.++-.
T Consensus 161 tv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a 239 (356)
T COG3288 161 TVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA 239 (356)
T ss_pred cccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence 3467888999999999999999999999 67777777777777777776543221110 1122222222222
Q ss_pred hcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEccCCC-Cc--ceechHhhhcCcEEEEeecC
Q 018075 247 AMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKT-EM--TVALTPAAAREVDVIGIFRY 308 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~-~~--~~~~~~~~~~~~~i~~~~~~ 308 (361)
..-.++|+||.+.--| ......+.+|+||..+|.+....+ .. .-+-.-...++++|.|..+.
T Consensus 240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl 310 (356)
T COG3288 240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL 310 (356)
T ss_pred HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence 2346899999976433 257789999999999998864332 21 12224466788999998764
No 193
>PRK08017 oxidoreductase; Provisional
Probab=96.64 E-value=0.018 Score=50.46 Aligned_cols=80 Identities=21% Similarity=0.317 Sum_probs=53.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEe-ecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 180 TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 180 ~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
+++||.|+ |.+|.++++.+...|+ .|++++++.++.+.+++.++..+. ++ .+..+..+.+..+....+.++|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDL-DDPESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeec-CCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 47999995 9999999999988999 678888888888777777754432 22 12222233333333222357899888
Q ss_pred ccCC
Q 018075 258 CVGF 261 (361)
Q Consensus 258 ~~g~ 261 (361)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 194
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.60 E-value=0.013 Score=49.58 Aligned_cols=98 Identities=16% Similarity=0.236 Sum_probs=62.9
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
..+..++.+||-+|||. |..+..+++. |. .|+++|.+++..+.+++. +...+.... .++.. .. .
T Consensus 25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~~----~~--~ 92 (197)
T PRK11207 25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLNN----LT--F 92 (197)
T ss_pred hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChhh----CC--c
Confidence 34566788999999887 7788888875 77 799999999876665542 322111100 12111 11 1
Q ss_pred CCCccEEEEccC----C----hHHHHHHHHhhcCCCEEEEEc
Q 018075 249 GSGIDVSFDCVG----F----DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 249 ~~~~d~vld~~g----~----~~~~~~~~~~l~~~G~~v~~g 282 (361)
...||+|+.+.. . ...++.+.+.|+|||+++.+.
T Consensus 93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 346999987533 1 235777888999999976543
No 195
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=96.60 E-value=0.0077 Score=52.21 Aligned_cols=107 Identities=22% Similarity=0.389 Sum_probs=64.1
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+....++|++||=+|||. |..+..+++..+. ..|+++|.+++-++.+++ .+...+.-...+.++.. +
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~-- 112 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----F-- 112 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S--
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----C--
Confidence 445778999999998776 7788888888763 379999999987766654 23222211112112211 1
Q ss_pred hcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEccCCCC
Q 018075 247 AMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKTE 287 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~~ 287 (361)
....||.|..+.|-. ..++++.+.|+|||+++.+....+.
T Consensus 113 -~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p~ 158 (233)
T PF01209_consen 113 -PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKPR 158 (233)
T ss_dssp --TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-S
T ss_pred -CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCCC
Confidence 146799998766543 4788899999999999998865543
No 196
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=96.59 E-value=0.049 Score=45.51 Aligned_cols=100 Identities=16% Similarity=0.312 Sum_probs=65.4
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+....+.++++||=+|+|. |..++.+++......+++++.+++..+.+++ ++...+..... +... .
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~--- 93 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---E--- 93 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---h---
Confidence 3445677899999999876 7777777777643479999999987766654 34332221111 1111 1
Q ss_pred hcCCCccEEEEccC---ChHHHHHHHHhhcCCCEEEEE
Q 018075 247 AMGSGIDVSFDCVG---FDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 247 ~~~~~~d~vld~~g---~~~~~~~~~~~l~~~G~~v~~ 281 (361)
....+|+|+.... -...++.+.+.|+++|+++..
T Consensus 94 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 94 -LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred -cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 1357999986432 123667788999999999764
No 197
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=96.58 E-value=0.038 Score=47.82 Aligned_cols=105 Identities=21% Similarity=0.279 Sum_probs=67.3
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+....++++++||-+|||. |..+..+++..+. ..+++++.+++..+.+++. +.+.+..... +... +.
T Consensus 38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~----~~ 109 (231)
T TIGR02752 38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAME----LP 109 (231)
T ss_pred HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chhc----CC
Confidence 3456788999999999876 7777888887642 2799999998877666542 3222211111 1110 10
Q ss_pred hhcCCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccC
Q 018075 246 NAMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 246 ~~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
.....+|+|+-+.. ....++.+.+.|+|||+++.....
T Consensus 110 -~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 153 (231)
T TIGR02752 110 -FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLETS 153 (231)
T ss_pred -CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEECC
Confidence 11357999975422 123577789999999999887543
No 198
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=96.57 E-value=0.085 Score=46.77 Aligned_cols=99 Identities=19% Similarity=0.262 Sum_probs=62.9
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
.++++|++||=+|+|+ |..++.+++.++ ...|++++.++++.+.++ ..|...+..... +... +.. .
T Consensus 67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~----~~~-~ 137 (264)
T TIGR00446 67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGRV----FGA-A 137 (264)
T ss_pred hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHHH----hhh-h
Confidence 4678999999898766 555666666653 236999999999876554 456554333222 2111 111 1
Q ss_pred CCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075 249 GSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 249 ~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 281 (361)
...||.||- |+|.. ..+..+++.|++||+++..
T Consensus 138 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs 198 (264)
T TIGR00446 138 VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS 198 (264)
T ss_pred ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 235999974 44431 2666788899999998744
No 199
>PRK06182 short chain dehydrogenase; Validated
Probab=96.56 E-value=0.024 Score=50.41 Aligned_cols=81 Identities=23% Similarity=0.288 Sum_probs=54.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
++.+++|.| +|++|...++.+...|+ .|+.++++.++.+.+.+.+...+ .++ .+.+++...+.++... ..++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIAE-EGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCEE
Confidence 467899998 59999999998888999 67888888877665554454332 232 2333444444444332 3579999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
+++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999874
No 200
>PRK00811 spermidine synthase; Provisional
Probab=96.53 E-value=0.019 Score=51.44 Aligned_cols=97 Identities=19% Similarity=0.170 Sum_probs=65.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC------C--C-EEeecCCCccchhHHHHHHHhh
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------A--D-ETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~--~-~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.- . + .+-.. ..|..+.++.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~---~~Da~~~l~~---- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV---IGDGIKFVAE---- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE---ECchHHHHhh----
Confidence 4568999999876 777778888767778999999999888887731 1 1 11111 1233333322
Q ss_pred cCCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEE
Q 018075 248 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 248 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~ 281 (361)
....+|+|+..... .+.++.+.+.|+++|.++.-
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 24679999874321 23467788999999998864
No 201
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=96.51 E-value=0.023 Score=47.21 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=60.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++++||-+|||. |..++.+++......|++++.+++..+.++ +.+.+.+..... +..+ +. ....+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCcc
Confidence 488999999876 677777776654447999999987665543 455443222111 2211 11 135799
Q ss_pred EEEEccC--ChHHHHHHHHhhcCCCEEEEE
Q 018075 254 VSFDCVG--FDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 254 ~vld~~g--~~~~~~~~~~~l~~~G~~v~~ 281 (361)
+|+...- -+..++.+.+.|++||+++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 9987531 123566778889999999876
No 202
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.074 Score=45.89 Aligned_cols=81 Identities=19% Similarity=0.165 Sum_probs=49.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHH---cCCCEE-eecCCCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARN---LGADET-AKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~---lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
++.++||.| +|.+|..+++.+...|+ .|+.++++.++. +.+++ .+...+ .+. .+..+..+...++... -.+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDL-VDPQAARRAVDEVNRQ-FGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeec-CCHHHHHHHHHHHHHH-hCC
Confidence 478999998 59999999998888899 578887766542 22222 233221 122 1223333334433322 247
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++.+.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998763
No 203
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.48 E-value=0.063 Score=49.15 Aligned_cols=99 Identities=11% Similarity=0.134 Sum_probs=66.4
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEeCChhHHH-HHHHc----CCCEEeecCCCccchhHHHHHHH
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLL-AARAFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~-la~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+...-+...+++|+|+|..|.+.+. ++...+.+.|...++++++.+ +++++ +... ..+ .+..+.+
T Consensus 120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~----~~~~~~~---- 190 (325)
T PRK08618 120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVV----NSADEAI---- 190 (325)
T ss_pred HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEe----CCHHHHH----
Confidence 4433345678999999999987665 445678888999999888765 33433 3321 111 1222222
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
...|+|+.|.++. +..-. ..+++|-+++.+|...
T Consensus 191 ----~~aDiVi~aT~s~-~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 191 ----EEADIIVTVTNAK-TPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred ----hcCCEEEEccCCC-CcchH-HhcCCCcEEEecCCCC
Confidence 4699999998876 43334 8999999999998654
No 204
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.027 Score=50.07 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=53.4
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.++||.| +|++|...++.+...|+ .|+.++++.++.+.+...+...+ .++ .+.++..+.+..+.+ ...++|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEA-EHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence 4689998 59999999998888999 67888888777766655554432 233 222344444444432 2357999999
Q ss_pred ccCC
Q 018075 258 CVGF 261 (361)
Q Consensus 258 ~~g~ 261 (361)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9873
No 205
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.46 E-value=0.032 Score=52.64 Aligned_cols=75 Identities=15% Similarity=0.267 Sum_probs=53.6
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
--.+.++||+|+|.+|.+++..+...|+..++.+.++.++. .++++++....+. +.+ +.+. -..+|+
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~~-l~~~----l~~aDi 245 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LSE-LPQL----IKKADI 245 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HHH-HHHH----hccCCE
Confidence 35688999999999999999999999987888888887764 4555565222222 111 1111 146999
Q ss_pred EEEccCCh
Q 018075 255 SFDCVGFD 262 (361)
Q Consensus 255 vld~~g~~ 262 (361)
||+|++.+
T Consensus 246 VI~aT~a~ 253 (414)
T PRK13940 246 IIAAVNVL 253 (414)
T ss_pred EEECcCCC
Confidence 99999987
No 206
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.45 E-value=0.059 Score=46.05 Aligned_cols=101 Identities=18% Similarity=0.193 Sum_probs=63.4
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEe------------ecCCCccchhHHHH
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETA------------KVSTDIEDVDTDVG 242 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~------------~~~~~~~~~~~~~~ 242 (361)
+.++.+||+.|||. |.-++-+|. .|. .|++++.++...+.+ ++.+..... .+.-...|+.+
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~--- 105 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA--- 105 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC---
Confidence 46778999999987 888888886 799 699999999887764 333322100 00000011111
Q ss_pred HHHhhcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEEcc
Q 018075 243 KIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 243 ~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
+.......||.|+|+..- ...++.+.+.|+|||+++.+..
T Consensus 106 -~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 106 -LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred -CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 000012469999996431 1357788999999998776654
No 207
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.45 E-value=0.07 Score=45.43 Aligned_cols=104 Identities=22% Similarity=0.313 Sum_probs=71.6
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
.+.+...++|=+|++. |+.++.+|..+. -.++++++.++++.+.+++ .|.+..+..... .+..+.+.+ ..
T Consensus 55 ~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~ 129 (219)
T COG4122 55 ARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL 129 (219)
T ss_pred HHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence 4556788999998654 788888888886 3379999999998877765 465553222111 244333332 23
Q ss_pred CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075 249 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 249 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g 282 (361)
...||+||--..- +..++.+++.|+|||-++.=.
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 5789999764442 257889999999999888654
No 208
>PLN02244 tocopherol O-methyltransferase
Probab=96.44 E-value=0.062 Score=49.56 Aligned_cols=97 Identities=16% Similarity=0.216 Sum_probs=64.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhhcCCC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
+++++||-+|||. |..+..+++..|+ .|++++.++...+.+++. +.. .+..... +... +. .....
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~---D~~~----~~-~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVA---DALN----QP-FEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc---Cccc----CC-CCCCC
Confidence 7889999999876 6778888888888 799999999866655543 321 1111111 1110 00 01357
Q ss_pred ccEEEEccCC------hHHHHHHHHhhcCCCEEEEEcc
Q 018075 252 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 252 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
||+|+..... ...++++.+.|+|||++++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9999864321 2467889999999999998754
No 209
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.43 E-value=0.061 Score=46.73 Aligned_cols=106 Identities=18% Similarity=0.213 Sum_probs=68.6
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
.+..++++||-+|+|. |..++.+++.++ ..++++++.+++..+.+++ .|...-+.+. ..+..+.+.++....
T Consensus 64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~~~ 140 (234)
T PLN02781 64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLNND 140 (234)
T ss_pred HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHhCC
Confidence 4567788999999754 666677777653 3489999999988776655 4543222221 134445554443211
Q ss_pred -CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075 249 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 249 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g 282 (361)
...||+||--...+ ..++.+.+.|++||.++.-.
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 35799998654322 35777889999999887643
No 210
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=96.43 E-value=0.042 Score=48.66 Aligned_cols=106 Identities=15% Similarity=0.208 Sum_probs=69.2
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhh
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
..+...+++++.+||=+|||. |..+..+++..+. .|++++.+++-.+.+++.... .-+.... .+... . ..
T Consensus 43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~----~-~~ 113 (263)
T PTZ00098 43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK----K-DF 113 (263)
T ss_pred HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc----C-CC
Confidence 345567889999999999875 6567777777777 799999999888777764321 1111100 11110 0 00
Q ss_pred cCCCccEEEEcc-----C---ChHHHHHHHHhhcCCCEEEEEcc
Q 018075 248 MGSGIDVSFDCV-----G---FDKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 248 ~~~~~d~vld~~-----g---~~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
....||+|+..- + -...++.+.+.|+|||+++....
T Consensus 114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 135699998621 1 12467788899999999998764
No 211
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=96.43 E-value=0.032 Score=49.66 Aligned_cols=98 Identities=14% Similarity=0.159 Sum_probs=61.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-C------CEEeecCCCccchhHHHHHHHhhcC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A------DETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~------~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
...++||++|+|. |..+..+++......+..++.+++-.+.+++.- . +.-+.+. ..+..+.+++ ..
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~----~~ 143 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD----TE 143 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh----CC
Confidence 3456999999766 555667777665668999999988777776631 1 0000100 1233233322 24
Q ss_pred CCccEEEEccC----------ChHHHHHHHHhhcCCCEEEEE
Q 018075 250 SGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 250 ~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~ 281 (361)
..+|+|+-... ..+.++.+.+.|+++|.++..
T Consensus 144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~ 185 (270)
T TIGR00417 144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ 185 (270)
T ss_pred CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence 68999976332 224567888999999999876
No 212
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.43 E-value=0.059 Score=45.69 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=31.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
.+.+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45899999999999999999999999888888876
No 213
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.40 E-value=0.095 Score=46.00 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=50.4
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE----eecCCCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET----AKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
.|.++||.|+ +++|.+.++.+...|+ .|+.+.++++..+.++++....+ .|. .+.++..+.+.++.+. -+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~-~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDV-ASDESIERAFATIKER-VG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCC-CCHHHHHHHHHHHHHH-hC
Confidence 5788999984 4999999998888999 56777666544444555432211 122 2223444444444332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
.+|+++++.|.
T Consensus 83 ~iD~lv~nAg~ 93 (252)
T PRK06079 83 KIDGIVHAIAY 93 (252)
T ss_pred CCCEEEEcccc
Confidence 69999998873
No 214
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.084 Score=45.63 Aligned_cols=82 Identities=29% Similarity=0.286 Sum_probs=50.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC---CEEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA---DETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
.+.++||.| +|.+|..+++.+...|+ .|+++++++++.+ ..+++.. ...+..+ .+..++...+.++.+. ..+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 467899998 59999999998877899 5777777776543 3344431 1112111 2223344444444332 247
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 215
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=96.39 E-value=0.024 Score=50.03 Aligned_cols=96 Identities=19% Similarity=0.311 Sum_probs=63.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhhcCCC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
.++.+||-+|||. |..+..+++. |. .|++++.+++..+.+++. |.. .+.... .+..+ +.......
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~~----l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQD----IAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHHH----HhhhcCCC
Confidence 5678899999877 7888888875 76 799999999888777653 321 111111 12211 11112467
Q ss_pred ccEEEEcc-----CC-hHHHHHHHHhhcCCCEEEEEc
Q 018075 252 IDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 252 ~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g 282 (361)
||+|+... .. ...+..+.+.|+|||+++.+-
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 99998642 11 246788999999999998753
No 216
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.089 Score=46.42 Aligned_cols=81 Identities=22% Similarity=0.304 Sum_probs=52.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-E--eecCCCccchhHHHHHHHhhcCCCc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+ ..++++... . .++ .+..+..+.+.++.+. -..+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDI-TDDAAIERAVATVVAR-FGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecC-CCHHHHHHHHHHHHHH-hCCC
Confidence 467899998 59999999998888999 6788888776543 444555321 1 122 2233344444444332 2469
Q ss_pred cEEEEccCC
Q 018075 253 DVSFDCVGF 261 (361)
Q Consensus 253 d~vld~~g~ 261 (361)
|+++++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
No 217
>PLN02366 spermidine synthase
Probab=96.39 E-value=0.051 Score=49.13 Aligned_cols=98 Identities=21% Similarity=0.237 Sum_probs=65.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CC------C-EEeecCCCccchhHHHHHHHhhc
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GA------D-ETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~------~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
...++||++|+|. |..+..+++.-+...|..++.+++-.+.++++ .. + .+-.. ..|....+++. .
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi---~~Da~~~l~~~---~ 162 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH---IGDGVEFLKNA---P 162 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE---EChHHHHHhhc---c
Confidence 5578999999876 66777888877767899999999888877773 21 1 11111 12333333322 2
Q ss_pred CCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEE
Q 018075 249 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 249 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~ 281 (361)
+..+|+||--... .+.++.+.+.|+|+|.++.-
T Consensus 163 ~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 163 EGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred CCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 4579999874432 13578889999999998764
No 218
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=96.39 E-value=0.025 Score=47.70 Aligned_cols=96 Identities=17% Similarity=0.261 Sum_probs=59.8
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
....++.+||-+|||. |..++.+++ .|. .|+++|.+++..+.+++. +.. + .. ...+.... .+ .
T Consensus 26 ~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~-v-~~--~~~d~~~~--~~----~ 92 (195)
T TIGR00477 26 VKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP-L-RT--DAYDINAA--AL----N 92 (195)
T ss_pred hccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC-c-ee--Eeccchhc--cc----c
Confidence 3445667999999876 777777776 477 799999999877665442 322 1 10 00111100 01 3
Q ss_pred CCccEEEEccC-----C---hHHHHHHHHhhcCCCEEEEEc
Q 018075 250 SGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 250 ~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~g 282 (361)
..+|+|+.+.. . ...++.+.+.|+|||.++.+.
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~ 133 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA 133 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence 46999976421 1 246778888999999966554
No 219
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.38 E-value=0.023 Score=55.16 Aligned_cols=74 Identities=26% Similarity=0.379 Sum_probs=54.0
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
.+.+|++|+|+|.|..|++++.+++..|+ .|++.|.++++.+.++++|+..... . ...+ .+ ..+|+
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~~--~---~~~~---~l-----~~~D~ 73 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVST--S---DAVQ---QI-----ADYAL 73 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEcC--c---chHh---Hh-----hcCCE
Confidence 35688999999999999999999999999 6788887766666667777643211 1 1111 11 35799
Q ss_pred EEEccCCh
Q 018075 255 SFDCVGFD 262 (361)
Q Consensus 255 vld~~g~~ 262 (361)
|+.+.|.+
T Consensus 74 VV~SpGi~ 81 (488)
T PRK03369 74 VVTSPGFR 81 (488)
T ss_pred EEECCCCC
Confidence 99998876
No 220
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.36 E-value=0.12 Score=46.06 Aligned_cols=82 Identities=23% Similarity=0.272 Sum_probs=49.6
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
++.++||.|+ + ++|.+.++.+...|+ .|+.+.++++.. ++.+++|....+..+ .+..+....+.++.+. -
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence 4678999995 4 899999998888999 566666654322 222334533222211 2233444444444332 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999998873
No 221
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.36 E-value=0.038 Score=44.47 Aligned_cols=103 Identities=18% Similarity=0.271 Sum_probs=63.6
Q ss_pred HHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecCCCccchhHHHHHHHh
Q 018075 170 ACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 170 ~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~ 246 (361)
+++...+ .++.+++|+|+|.+|...++.+...|...+...+++.++.+ ++++++.... ... .+..+.
T Consensus 9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~------ 78 (155)
T cd01065 9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLEEL------ 78 (155)
T ss_pred HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchhhc------
Confidence 4444443 55789999999999999999888887546888888877654 4555664310 011 111111
Q ss_pred hcCCCccEEEEccCChHH----HHHHHHhhcCCCEEEEEccC
Q 018075 247 AMGSGIDVSFDCVGFDKT----MSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~~~----~~~~~~~l~~~G~~v~~g~~ 284 (361)
-.++|+|+.+++.... .......++++..++.++..
T Consensus 79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 2579999999886532 11112345666666666544
No 222
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=96.35 E-value=0.084 Score=46.54 Aligned_cols=100 Identities=23% Similarity=0.278 Sum_probs=68.8
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcC
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+....++++++||-+|||. |..+..+++..+...|++++.+++..+.+++.-.. ..+. .+... +. ..
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~~~----~~--~~ 91 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADIAS----WQ--PP 91 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cchhc----cC--CC
Confidence 4446678899999999876 77788888877544899999999988887764321 1111 12111 11 13
Q ss_pred CCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEc
Q 018075 250 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 250 ~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g 282 (361)
..+|+|+....- ...++.+.+.|+|||+++...
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 479999865431 246888999999999998753
No 223
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.34 E-value=0.07 Score=52.07 Aligned_cols=45 Identities=20% Similarity=0.242 Sum_probs=36.8
Q ss_pred hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH
Q 018075 173 RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 218 (361)
Q Consensus 173 ~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~ 218 (361)
..+.+.|.++||.| +|.+|..+++.+...|+ .|+++.++.++.+.
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~ 119 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES 119 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence 46678999999998 59999999998888899 57777787776543
No 224
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.33 E-value=0.043 Score=44.23 Aligned_cols=95 Identities=19% Similarity=0.237 Sum_probs=61.2
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
...-.|.+++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.... .. .+. -...|
T Consensus 18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~~----~~a----~~~ad 80 (162)
T PF00670_consen 18 NLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------TL----EEA----LRDAD 80 (162)
T ss_dssp -S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------H----HHH----TTT-S
T ss_pred ceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------CH----HHH----HhhCC
Confidence 345689999999999999999999999999 78999998877665555565321 11 111 24689
Q ss_pred EEEEccCChHH-HHHHHHhhcCCCEEEEEccCC
Q 018075 254 VSFDCVGFDKT-MSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 254 ~vld~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+++.+.|.... ..+-++.|+.+..+..+|-.+
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d 113 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHFD 113 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSST
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcCc
Confidence 99999997643 467788898888666665444
No 225
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.094 Score=46.37 Aligned_cols=81 Identities=21% Similarity=0.220 Sum_probs=51.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GAD-ETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
+|.++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ +++ +.. ..+..+ .+..+....+.++.+ -
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--I 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--h
Confidence 478899998 58999999999988999 577788877665433 222 222 112111 223344444444432 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 469999998874
No 226
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.33 E-value=0.059 Score=48.94 Aligned_cols=91 Identities=24% Similarity=0.338 Sum_probs=61.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 258 (361)
.+|.|+|+|.+|...+..++..|. ..|++.++++++.+.+++.|...... .+..+. -.+.|+||.|
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~--------~~~aDvViia 73 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEA--------VKGADLVILC 73 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHH--------hcCCCEEEEC
Confidence 689999999999999998888885 36888899998888888877532111 111111 1468999999
Q ss_pred cCChH---HHHHHHHhhcCCCEEEEEcc
Q 018075 259 VGFDK---TMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 259 ~g~~~---~~~~~~~~l~~~G~~v~~g~ 283 (361)
+.... .++.+...++++..++.++.
T Consensus 74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 74 VPVGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 98642 13334445667776666653
No 227
>PRK04148 hypothetical protein; Provisional
Probab=96.31 E-value=0.057 Score=42.10 Aligned_cols=95 Identities=12% Similarity=0.174 Sum_probs=63.2
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
.-.++.+++++|+| .|...+..+...|. .|+++|.++++.+.+++.+.+.+.+ +--+.++ . + -.++|+
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~--~---~----y~~a~l 80 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL--E---I----YKNAKL 80 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH--H---H----HhcCCE
Confidence 33467899999998 78755555667898 7999999999999999888655432 1111111 1 1 257999
Q ss_pred EEEccCChHHHHHHHHhhcC-CCEEEEE
Q 018075 255 SFDCVGFDKTMSTALNATRP-GGKVCLI 281 (361)
Q Consensus 255 vld~~g~~~~~~~~~~~l~~-~G~~v~~ 281 (361)
++..-..++....+++.-+. +.-++..
T Consensus 81 iysirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 81 IYSIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EEEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 99998877655555554433 3444443
No 228
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.31 E-value=0.017 Score=50.37 Aligned_cols=110 Identities=25% Similarity=0.398 Sum_probs=66.3
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+..++++||++|+=.|+|+ |.+...+++..| --+|+..+.++++.+.+++ .|....+.... .|..+.- +.
T Consensus 33 ~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~~ 107 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--FD 107 (247)
T ss_dssp HHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----S
T ss_pred HHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--cc
Confidence 4568899999999998665 667777887775 2379999999998876654 55432111111 1221000 00
Q ss_pred hhcCCCccEEEEccCCh-HHHHHHHHhh-cCCCEEEEEccCC
Q 018075 246 NAMGSGIDVSFDCVGFD-KTMSTALNAT-RPGGKVCLIGLAK 285 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~-~~~~~~~~~l-~~~G~~v~~g~~~ 285 (361)
......+|.||=-...| ..+..+.+.| ++||+++++...-
T Consensus 108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~i 149 (247)
T PF08704_consen 108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPCI 149 (247)
T ss_dssp TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESSH
T ss_pred ccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCH
Confidence 00135688885444444 5889999999 8999999986543
No 229
>PLN02476 O-methyltransferase
Probab=96.31 E-value=0.079 Score=47.00 Aligned_cols=105 Identities=16% Similarity=0.210 Sum_probs=69.5
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
.+..+..+||-+|++. |..++.+|+.++ -..+++++.++++.+.+++ .|..+-+.+.. ++..+.+.++....
T Consensus 114 ~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~~~ 190 (278)
T PLN02476 114 VQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQNG 190 (278)
T ss_pred HHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcc
Confidence 5567789999999644 667777777764 2268999999988777644 56543222222 45555555543211
Q ss_pred -CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEE
Q 018075 249 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 249 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~ 281 (361)
...||+||--.... ..++.+++.|++||.++.=
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 35799998765533 3577788999999988764
No 230
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=96.26 E-value=0.084 Score=50.29 Aligned_cols=104 Identities=15% Similarity=0.154 Sum_probs=64.9
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEe-ecCCCccchhHHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETA-KVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~-~~~~~~~~~~~~~~~~~ 245 (361)
....++++|++||=+|||+ |..++++++.++...+++++.++++.+.++ .+|....+ ....+...... .
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~----~- 304 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ----W- 304 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc----c-
Confidence 3445688999999998766 556667777665337999999999876554 45654211 11111111100 0
Q ss_pred hhcCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075 246 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 246 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 281 (361)
.....||.||- |+|.. ..+..+++.|+|||+++..
T Consensus 305 -~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys 367 (426)
T TIGR00563 305 -AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA 367 (426)
T ss_pred -ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 01356999974 44421 3667788999999999864
No 231
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.24 E-value=0.076 Score=43.92 Aligned_cols=92 Identities=15% Similarity=0.194 Sum_probs=59.8
Q ss_pred EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
|+|.| +|.+|...++.+...|. .|.++.+++++.+. ..+... +..+- .+.. .+.+.. .++|.||.+.|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~--~d~~-~~~~al----~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDL--FDPD-SVKAAL----KGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCT--TCHH-HHHHHH----TTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeee--hhhh-hhhhhh----hhcchhhhhhh
Confidence 68999 49999999999999997 68888888887766 334433 22222 2332 222221 37999999998
Q ss_pred Ch----HHHHHHHHhhcCC--CEEEEEccC
Q 018075 261 FD----KTMSTALNATRPG--GKVCLIGLA 284 (361)
Q Consensus 261 ~~----~~~~~~~~~l~~~--G~~v~~g~~ 284 (361)
.. .....+++.+... .+++.++..
T Consensus 70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp STTTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred hhcccccccccccccccccccccceeeecc
Confidence 42 2455555555433 377776643
No 232
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.22 E-value=0.16 Score=43.03 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=57.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHHcC-CCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLG-ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.|.+|||+|+|.+|..-++.+...|+ .|.+++.... ..+.+.+.| ... + .. ++... . -.++++|
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~-~---~~--~~~~~--d-----l~~~~lV 73 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITW-L---AR--CFDAD--I-----LEGAFLV 73 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEE-E---eC--CCCHH--H-----hCCcEEE
Confidence 47899999999999999999999999 4566544322 222222233 211 1 11 11111 1 2479999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
|-+.+.++.-..+....+..|.++-+
T Consensus 74 i~at~d~~ln~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 74 IAATDDEELNRRVAHAARARGVPVNV 99 (205)
T ss_pred EECCCCHHHHHHHHHHHHHcCCEEEE
Confidence 99999875556666666677766644
No 233
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.1 Score=45.88 Aligned_cols=80 Identities=30% Similarity=0.392 Sum_probs=50.4
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC-CC-EE--eecCCCccchhHHHHHHHhhcCCCcc
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG-AD-ET--AKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ +.++ .. .. .|. .+..+..+.+.++......++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDV-TDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecC-CCHHHHHHHHHHHHHHcCCCCC
Confidence 4689998 59999999998888899 677887877765544 3333 11 11 222 2223333444443322145799
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99998875
No 234
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.21 E-value=0.19 Score=44.80 Aligned_cols=105 Identities=20% Similarity=0.242 Sum_probs=64.4
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCChh---HHH-HHHHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQ---RLS-IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
.|.++||.|+ +++|.+.++.+...|+ .|+.+.++++ +.+ ..++++....+..+ .+.++....+.++.+. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence 4688999985 5899999998888999 5666666642 222 33445533222211 2233444444444332 2
Q ss_pred CCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075 250 SGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 250 ~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~ 284 (361)
+++|+++++.|.. + ..+..++.|..+|+++.++..
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 145 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL 145 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence 5799999998741 1 234455667778999887643
No 235
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.18 E-value=0.024 Score=50.79 Aligned_cols=76 Identities=14% Similarity=0.163 Sum_probs=51.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
++.++||+|+|+.+.+++.-+...|+..+..+.++.+|.+ ++++++... +..+. .. ..+... -..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~----~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI----EKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc----ccCCCEE
Confidence 5789999999999999999999999988888888887765 444444221 11110 00 011111 2469999
Q ss_pred EEccCCh
Q 018075 256 FDCVGFD 262 (361)
Q Consensus 256 ld~~g~~ 262 (361)
++|++..
T Consensus 195 InaTp~g 201 (282)
T TIGR01809 195 VSTVPAD 201 (282)
T ss_pred EECCCCC
Confidence 9998754
No 236
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.17 E-value=0.1 Score=45.03 Aligned_cols=100 Identities=18% Similarity=0.222 Sum_probs=64.1
Q ss_pred HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEeCC----hhH--------HHHHHHcCCCEEeecCCC
Q 018075 169 HACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAP--RIIITDVD----VQR--------LSIARNLGADETAKVSTD 233 (361)
Q Consensus 169 ~~l~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~--~vv~v~~~----~~~--------~~~~~~lg~~~~~~~~~~ 233 (361)
.+++..+ --++.+++|+|+|+.|.+++..+...|+. ++..++++ .++ .+++++++... ..
T Consensus 14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---- 88 (226)
T cd05311 14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---- 88 (226)
T ss_pred HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc----
Confidence 3444433 24678999999999999999988889998 89999887 343 34555544211 00
Q ss_pred ccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075 234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
.++.+. + .++|++|++++..-.....++.|.++..+..+.
T Consensus 89 -~~l~~~---l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 89 -GTLKEA---L-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred -CCHHHH---H-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 122222 1 348999999873322346677777776555443
No 237
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=96.15 E-value=0.11 Score=49.38 Aligned_cols=101 Identities=16% Similarity=0.252 Sum_probs=64.3
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
..++++|++||=+|||+ |.-+++++..++ ...|+++|.++++.+.+++ +|.+.+..... +... +...
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~---Da~~-l~~~--- 303 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIA---DAER-LTEY--- 303 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEEC---chhh-hhhh---
Confidence 35788999999988766 556667777762 2379999999998876644 56554322212 2111 1111
Q ss_pred cCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075 248 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 248 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 281 (361)
....||.||- |+|.. ..+..+++.|+|||+++..
T Consensus 304 ~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs 365 (431)
T PRK14903 304 VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYS 365 (431)
T ss_pred hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1346999974 44331 1366788999999998754
No 238
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=96.09 E-value=0.078 Score=44.94 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=64.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++.+||-+|||. |..+..+++......+++++.+++..+.+++ .+...+.... .+....+... .....+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence 678899999887 7788888887654479999999988876654 2333221111 2221122111 1245699
Q ss_pred EEEEccC--------------ChHHHHHHHHhhcCCCEEEEE
Q 018075 254 VSFDCVG--------------FDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 254 ~vld~~g--------------~~~~~~~~~~~l~~~G~~v~~ 281 (361)
.|+-... ....++.+.+.|+|+|.++..
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~ 155 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA 155 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence 9876432 134688899999999999875
No 239
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.08 E-value=0.12 Score=45.81 Aligned_cols=83 Identities=22% Similarity=0.365 Sum_probs=54.7
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh----HHHHHHHcC-C-CEEeecCCCccchhHHHHHHHhhcC
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ----RLSIARNLG-A-DETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
-.|+.|||.| ++++|.+.++=...+|+ +++..|.+++ ..+.+++.| + .+..|. ++.++..+...++.+..
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~- 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEV- 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhc-
Confidence 3689999998 47999888887777888 6777776654 334444444 2 234444 33445555555555543
Q ss_pred CCccEEEEccCCh
Q 018075 250 SGIDVSFDCVGFD 262 (361)
Q Consensus 250 ~~~d~vld~~g~~ 262 (361)
+.+|++++.+|.-
T Consensus 113 G~V~ILVNNAGI~ 125 (300)
T KOG1201|consen 113 GDVDILVNNAGIV 125 (300)
T ss_pred CCceEEEeccccc
Confidence 4899999988754
No 240
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.069 Score=46.89 Aligned_cols=81 Identities=25% Similarity=0.347 Sum_probs=51.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
+|.++||.| +|++|.+.++.+...|+ .|+.+++++.+.+ ..++++.... .+. .+..+..+...++... ..++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDV-TDEDAVNALFDTAAET-YGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence 578999999 59999999998888999 5777777776554 3344544222 122 2222333333333221 247999
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
++.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998864
No 241
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=96.06 E-value=0.44 Score=41.75 Aligned_cols=100 Identities=20% Similarity=0.322 Sum_probs=65.4
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCC
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+.....++.+||-+|||. |..+..+++ .|. .++++|.+++..+.+++.... ..+. . +... +. ....
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~--~---d~~~----~~-~~~~ 102 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLA--G---DIES----LP-LATA 102 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEE--c---Cccc----Cc-CCCC
Confidence 334445678999999876 666666655 566 799999999988888775421 1111 1 1111 10 1235
Q ss_pred CccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccC
Q 018075 251 GIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 251 ~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
.||+|+.... ....+.++.+.|+|||.++.....
T Consensus 103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~~ 142 (251)
T PRK10258 103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLV 142 (251)
T ss_pred cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 6999987542 124678889999999999876543
No 242
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.071 Score=48.95 Aligned_cols=81 Identities=33% Similarity=0.426 Sum_probs=52.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++.|.... .|+ .+.++..+...++.+ ..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~~~~~-~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDV-TDADQVKALATQAAS-FG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHH-hc
Confidence 568999998 59999999999999999 577788887765432 33454321 122 222333333333332 23
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 579999999874
No 243
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.23 Score=43.91 Aligned_cols=81 Identities=20% Similarity=0.284 Sum_probs=49.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...++.+...|+ .|+.++++.++.+ ..+++ +.. ..+..+ .+..+....+.++... ..
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 578999998 59999999998888999 5788877765543 22222 222 111111 1223344444443322 24
Q ss_pred CccEEEEccC
Q 018075 251 GIDVSFDCVG 260 (361)
Q Consensus 251 ~~d~vld~~g 260 (361)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 7999998875
No 244
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.14 Score=44.56 Aligned_cols=104 Identities=19% Similarity=0.237 Sum_probs=60.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHH-HH---HHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IA---RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~-~~---~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
++.++||.| +|.+|...+..+...|. .|+.+.++. ++.+ +. +..+... .+..+ .+.++..+.+.++... .
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE-F 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence 467899998 59999999998888898 466665543 2222 22 2223221 11111 2223333334333321 2
Q ss_pred CCccEEEEccCCh-------------------HHHHHHHHhhcCCCEEEEEcc
Q 018075 250 SGIDVSFDCVGFD-------------------KTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 250 ~~~d~vld~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 283 (361)
.++|+++.+.+.. ..++.+.+.+..+|+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 4699999887642 234455555666789988864
No 245
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=96.00 E-value=0.048 Score=46.22 Aligned_cols=104 Identities=24% Similarity=0.303 Sum_probs=69.4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
+.....+||-+|++. |+.++.+|+.+. . ++++++.++++.+.+++ .|...-+.+.. .+..+.+.++....
T Consensus 42 ~~~~~k~vLEIGt~~-GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 42 RLTRPKRVLEIGTFT-GYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDG 117 (205)
T ss_dssp HHHT-SEEEEESTTT-SHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTT
T ss_pred HhcCCceEEEecccc-ccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhcc
Confidence 345668999999765 888889998763 5 79999999998877754 45432222211 45556666554322
Q ss_pred -CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075 249 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 249 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g 282 (361)
.+.||+||--..-. ..+..+++.|++||.++.=.
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 25799997654433 35667889999999888754
No 246
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.98 E-value=0.054 Score=50.89 Aligned_cols=93 Identities=18% Similarity=0.308 Sum_probs=57.6
Q ss_pred EEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHH--cCCC-EEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 182 VMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARN--LGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 182 vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~--lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
|+|+|+|.+|..+++.+...+-. .|+.++++.++.+.+.+ .+.. .....+. .+..+ +.++. .+.|+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~-l~~~~----~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPES-LAELL----RGCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHHH-HHHHH----TTSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHHH-HHHHH----hcCCEEEE
Confidence 68899999999999988777643 78999999998765543 2221 1122121 22222 44432 46799999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEE
Q 018075 258 CVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 258 ~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
|+|......-+-.++..+-+++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred CCccchhHHHHHHHHHhCCCeecc
Confidence 999664555566677778888773
No 247
>PLN02823 spermine synthase
Probab=95.97 E-value=0.11 Score=47.62 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=63.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC-C------EEeecCCCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-D------ETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~------~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
...+|||+|+|. |..+..+++..+..++++++-+++-.++++++-. . .-+.+ ...|....+++ ...
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v--~~~Da~~~L~~----~~~ 175 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLEL--IINDARAELEK----RDE 175 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEE--EEChhHHHHhh----CCC
Confidence 457999999765 6667778887777789999999999999887431 1 10010 01233333322 246
Q ss_pred CccEEEEccCC------------hHHHH-HHHHhhcCCCEEEEE
Q 018075 251 GIDVSFDCVGF------------DKTMS-TALNATRPGGKVCLI 281 (361)
Q Consensus 251 ~~d~vld~~g~------------~~~~~-~~~~~l~~~G~~v~~ 281 (361)
.+|+||--... .+.++ .+.+.|+++|.++.-
T Consensus 176 ~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q 219 (336)
T PLN02823 176 KFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ 219 (336)
T ss_pred CccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence 79999764321 12455 678899999988753
No 248
>PRK07574 formate dehydrogenase; Provisional
Probab=95.96 E-value=0.15 Score=47.61 Aligned_cols=92 Identities=22% Similarity=0.251 Sum_probs=63.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+|.|+|.|.+|...++.++.+|. .|.+.++.....+..++++... + .++.+ +. ...|+|+-
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~l~e----ll----~~aDvV~l 254 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VSFDS----LV----SVCDVVTI 254 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CCHHH----Hh----hcCCEEEE
Confidence 57899999999999999999999999 6888887654444444555421 1 12222 21 46899988
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKTM-----STALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 285 (361)
+....... ...+..|+++..+|-++...
T Consensus 255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 287 (385)
T PRK07574 255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK 287 (385)
T ss_pred cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence 77644333 34567889998887776544
No 249
>PRK03612 spermidine synthase; Provisional
Probab=95.95 E-value=0.078 Score=51.84 Aligned_cols=97 Identities=16% Similarity=0.172 Sum_probs=64.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-C----------CEEeecCCCccchhHHHHHHH
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A----------DETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~----------~~~~~~~~~~~~~~~~~~~~~ 245 (361)
++.++||++|+|. |..+..+++.-+..+++.++.+++-.+.+++.. . +.+... ..|..+.+++
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi---~~Da~~~l~~-- 369 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVV---NDDAFNWLRK-- 369 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEE---EChHHHHHHh--
Confidence 5678999999775 667777777544468999999999999888721 0 111111 1233333322
Q ss_pred hhcCCCccEEEEccCCh-----------HHHHHHHHhhcCCCEEEEE
Q 018075 246 NAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~ 281 (361)
...++|+|+-....+ +.++.+.+.|+|+|.++.-
T Consensus 370 --~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~ 414 (521)
T PRK03612 370 --LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQ 414 (521)
T ss_pred --CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEe
Confidence 246899998754322 2567888999999998864
No 250
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=95.94 E-value=0.11 Score=49.59 Aligned_cols=104 Identities=18% Similarity=0.230 Sum_probs=64.2
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhh
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
..++++|++||=+|||+ |..+..+++.++ ...|++++.++++.+.++ .+|.+.+..... +........ ..
T Consensus 247 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~---D~~~~~~~~-~~ 321 (434)
T PRK14901 247 LLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAA---DSRNLLELK-PQ 321 (434)
T ss_pred HhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeC---Chhhccccc-cc
Confidence 35678999999988765 555566676653 237999999998876654 467655333222 211110000 00
Q ss_pred cCCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075 248 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 248 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 281 (361)
....||.||- |+|. ...+..+++.|+|||+++..
T Consensus 322 ~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys 383 (434)
T PRK14901 322 WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA 383 (434)
T ss_pred ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1246999874 4442 13477788999999998753
No 251
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.93 E-value=0.087 Score=47.19 Aligned_cols=46 Identities=28% Similarity=0.385 Sum_probs=38.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL 222 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l 222 (361)
..+.+|+|+|+|+.|.+++..+...|+..+..++++.+|.+.+ +.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l 171 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL 171 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 4568999999999999999999999998899999988776544 444
No 252
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.93 E-value=0.25 Score=40.01 Aligned_cols=83 Identities=11% Similarity=0.083 Sum_probs=51.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+|||+|+|.+|..-++.+...|++ |..++ ++..+.+.+++.-... . ..+. ...-.++|+|+-
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~---~--~~~~-------~~dl~~a~lVia 76 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWK---Q--KTFS-------NDDIKDAHLIYA 76 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEE---e--cccC-------hhcCCCceEEEE
Confidence 678999999999999988888888994 55553 3333333445421111 1 1111 112357999999
Q ss_pred ccCChHHHHHHHHhhcCCC
Q 018075 258 CVGFDKTMSTALNATRPGG 276 (361)
Q Consensus 258 ~~g~~~~~~~~~~~l~~~G 276 (361)
+.+.+ ..+..+..++..+
T Consensus 77 aT~d~-e~N~~i~~~a~~~ 94 (157)
T PRK06719 77 ATNQH-AVNMMVKQAAHDF 94 (157)
T ss_pred CCCCH-HHHHHHHHHHHHC
Confidence 99977 4555555444333
No 253
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.2 Score=43.63 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=49.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...+..+...|. .++.+++++++.+.. ++ .+.. ..+..+ .+..+..+...++... -.
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-LG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 578899998 59999999998888999 577777776654322 22 2322 111111 1222233333333221 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 254
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.93 E-value=0.28 Score=37.16 Aligned_cols=92 Identities=18% Similarity=0.184 Sum_probs=62.6
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261 (361)
Q Consensus 182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 261 (361)
|+|.|.|.+|...++.++..+. .|+.++.++++.+.+++.|... +.-+.. + .+.+++ .+-..++.++-+.+.
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~-i~gd~~--~-~~~l~~---a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEV-IYGDAT--D-PEVLER---AGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEE-EES-TT--S-HHHHHH---TTGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccc-ccccch--h-hhHHhh---cCccccCEEEEccCC
Confidence 5788999999999999998665 7999999999999999888543 332221 1 122332 234679999988876
Q ss_pred hHH---HHHHHHhhcCCCEEEEE
Q 018075 262 DKT---MSTALNATRPGGKVCLI 281 (361)
Q Consensus 262 ~~~---~~~~~~~l~~~G~~v~~ 281 (361)
+.. .-...+.+.+..+++..
T Consensus 73 d~~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 73 DEENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCeEEEE
Confidence 632 22344556777777654
No 255
>PRK07060 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.084 Score=45.87 Aligned_cols=78 Identities=21% Similarity=0.340 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
++.+++|.| +|.+|...++.+...|. .|+.++++.++.+.+ ++++... +..+- .+.. .+.++... ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~D~--~~~~-~v~~~~~~-~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEP-LRLDV--GDDA-AIRAALAA-AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeE-EEecC--CCHH-HHHHHHHH-hCCCCEE
Confidence 568999999 58999999999999999 577787877665443 4445433 22221 1211 22222221 3479999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
|++.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 998874
No 256
>PRK07109 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.23 Score=45.66 Aligned_cols=82 Identities=21% Similarity=0.238 Sum_probs=51.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE-eecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...++.+...|+ .|+.+++++++.+.+ ++.|.... +..+ .+.++..+...++.+. -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-LG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-CC
Confidence 467899998 59999999998888999 577777877665432 23343321 1111 2223333333333221 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 257
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.89 E-value=0.079 Score=46.51 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=49.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
.+.++||.| +|++|.+.++.+...|++ |+.+ .++++..+.+++.+...+ .+. .+..+..+.+.++.+. -+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVFTIKCDV-GNRDQVKKSKEVVEKE-FGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCeEEEecC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence 467899998 599999999988889995 5544 344444444443343221 222 2333444444444332 247999
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
++.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 258
>PRK06949 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.099 Score=45.85 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=52.8
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-c---CC-CEEeecC-CCccchhHHHHHHHhhcC
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GA-DETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l---g~-~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
..+.++||.| +|.+|..++..+...|+ .|+.+.++.++.+.+.+ + +. ...+..+ .+.++..+.+.++.. ..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hc
Confidence 4578999998 59999999999888999 68888888776543322 2 21 1122211 222334444444332 23
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
.++|+++++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 579999999884
No 259
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.88 E-value=0.18 Score=40.89 Aligned_cols=82 Identities=21% Similarity=0.243 Sum_probs=50.6
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC--hhH-HHHHHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQR-LSIARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~--~~~-~~~~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
+++||.| ++++|...++.+...|..+++.+.++ .++ .+++.+ .+... .+..+ .+.++....+.++.. ...
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIK-RFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHH-HHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence 3688998 59999999887777787678888887 333 333333 34211 11111 233344445544442 246
Q ss_pred CccEEEEccCCh
Q 018075 251 GIDVSFDCVGFD 262 (361)
Q Consensus 251 ~~d~vld~~g~~ 262 (361)
.+|++|.+.|..
T Consensus 80 ~ld~li~~ag~~ 91 (167)
T PF00106_consen 80 PLDILINNAGIF 91 (167)
T ss_dssp SESEEEEECSCT
T ss_pred cccccccccccc
Confidence 799999988765
No 260
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.28 Score=42.66 Aligned_cols=82 Identities=26% Similarity=0.296 Sum_probs=51.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++.++||.| +|.+|...++.+...|+ .|+.+++++++.+ ..++++.... +..+ .+..+.......+.+. ..++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 467899998 59999999999888999 5777877766543 3445554321 1111 1222232333333221 24799
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 261
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.87 E-value=0.28 Score=41.50 Aligned_cols=89 Identities=10% Similarity=0.235 Sum_probs=51.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-hH-HHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QR-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.|.+|||+|+|.+|...+..+...|+ .|.+++... +. .+++.+ +. +.+... .+... .-.++|+|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~---i~~~~~--~~~~~-------~l~~adlV 74 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK---IRWKQK--EFEPS-------DIVDAFLV 74 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC---EEEEec--CCChh-------hcCCceEE
Confidence 57899999999999999988888998 455554332 11 223322 21 111111 11110 12579999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
|-+++.+ ..+..+......+.++-+
T Consensus 75 iaaT~d~-elN~~i~~~a~~~~lvn~ 99 (202)
T PRK06718 75 IAATNDP-RVNEQVKEDLPENALFNV 99 (202)
T ss_pred EEcCCCH-HHHHHHHHHHHhCCcEEE
Confidence 9999988 444444444444555544
No 262
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=95.86 E-value=0.055 Score=39.09 Aligned_cols=85 Identities=22% Similarity=0.371 Sum_probs=55.1
Q ss_pred EECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE---EeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 184 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 184 I~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
-+|+| .|..+..+++. +...+++++.+++..+.+++..... ... .+..++. + ....||+|+....
T Consensus 2 diG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~--~d~~~l~-----~---~~~sfD~v~~~~~ 69 (95)
T PF08241_consen 2 DIGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQ--GDAEDLP-----F---PDNSFDVVFSNSV 69 (95)
T ss_dssp EET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEE--SBTTSSS-----S----TT-EEEEEEESH
T ss_pred EecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchhee--ehHHhCc-----c---ccccccccccccc
Confidence 45777 48889999988 4448999999999888888865432 222 1111110 1 2467999987432
Q ss_pred C------hHHHHHHHHhhcCCCEEEE
Q 018075 261 F------DKTMSTALNATRPGGKVCL 280 (361)
Q Consensus 261 ~------~~~~~~~~~~l~~~G~~v~ 280 (361)
- ...++++.+.|+|+|+++.
T Consensus 70 ~~~~~~~~~~l~e~~rvLk~gG~l~~ 95 (95)
T PF08241_consen 70 LHHLEDPEAALREIYRVLKPGGRLVI 95 (95)
T ss_dssp GGGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeeccCHHHHHHHHHHHcCcCeEEeC
Confidence 1 1467889999999999874
No 263
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.86 E-value=0.035 Score=49.35 Aligned_cols=48 Identities=23% Similarity=0.283 Sum_probs=40.1
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG 223 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg 223 (361)
..+|++++|+|+|+.+.+++.-++..|+.+++++.++.+|.+.+ +.++
T Consensus 123 ~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 123 DVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 34689999999999999999999999988899998988876544 4454
No 264
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.093 Score=47.32 Aligned_cols=81 Identities=26% Similarity=0.367 Sum_probs=53.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--CEE---eecCCCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--DET---AKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~~---~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+|.++||.| +|++|.++++.+...|+ .|+.++++.++.+ ..++++. ... .++ .+..+..+.+.++... .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVER-FG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHH-cC
Confidence 578999998 59999999999999999 6777878777654 4455542 111 232 2223344444444332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999885
No 265
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.083 Score=46.64 Aligned_cols=82 Identities=18% Similarity=0.244 Sum_probs=50.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ +.+ +.. ..+..+ .+..+..+.+.++.+. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-FG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 578999998 58999999998888999 678888877654432 222 322 111111 2222333333333322 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 266
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.34 Score=43.11 Aligned_cols=83 Identities=24% Similarity=0.310 Sum_probs=49.6
Q ss_pred CCCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCCh---hHH-HHHHHcCCCEEeecC-CCccchhHHHHHHHhhc
Q 018075 177 GPETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRL-SIARNLGADETAKVS-TDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 177 ~~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~---~~~-~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (361)
-.+.++||.|+ +++|.+.++.+...|+ .|+.+.+++ ++. ++.++++....+..+ .+.++..+.+.++.+.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK- 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-
Confidence 35788999985 5899999998888999 566665543 222 233445532222221 2233444444444332
Q ss_pred CCCccEEEEccCC
Q 018075 249 GSGIDVSFDCVGF 261 (361)
Q Consensus 249 ~~~~d~vld~~g~ 261 (361)
-+++|+++++.|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 2479999998863
No 267
>PRK06398 aldose dehydrogenase; Validated
Probab=95.80 E-value=0.059 Score=47.47 Aligned_cols=76 Identities=18% Similarity=0.269 Sum_probs=48.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
+|.++||.| +|++|.+.+..+...|+ .|+.+++++++.. .... ..+. .+..+..+.+.++.+. -+++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~-~~~~~i~~~~~~~~~~-~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDV-SNKEQVIKGIDYVISK-YGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence 468999998 58999999999988999 5777766654321 1111 1122 2223444444444332 2469999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
+++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998874
No 268
>PRK09186 flagellin modification protein A; Provisional
Probab=95.79 E-value=0.23 Score=43.38 Aligned_cols=80 Identities=24% Similarity=0.368 Sum_probs=50.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc----CCCE----EeecCCCccchhHHHHHHHhh
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL----GADE----TAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~----~~~~~~~~~~~~~~~~~~~~~ 247 (361)
++.++||.| +|.+|...+..+...|+ .|+.+.++.++.+ .++++ +... ..+. .+..++.+.+.++...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDI-TDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecC-CCHHHHHHHHHHHHHH
Confidence 578899998 58999999998888999 5777777766543 33333 2211 1122 2223344444444322
Q ss_pred cCCCccEEEEccC
Q 018075 248 MGSGIDVSFDCVG 260 (361)
Q Consensus 248 ~~~~~d~vld~~g 260 (361)
-.++|+++++.+
T Consensus 81 -~~~id~vi~~A~ 92 (256)
T PRK09186 81 -YGKIDGAVNCAY 92 (256)
T ss_pred -cCCccEEEECCc
Confidence 246999999875
No 269
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=95.79 E-value=0.34 Score=43.52 Aligned_cols=56 Identities=25% Similarity=0.309 Sum_probs=46.0
Q ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe---CChhHHHHHHHcCCCEEe
Q 018075 172 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD---VDVQRLSIARNLGADETA 228 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~---~~~~~~~~~~~lg~~~~~ 228 (361)
..+.++||.++||=. +|.+|...+.+++..|.+ ++.+- .+.+|...++.||+..+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk-~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYK-CIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCce-EEEEechhhhHHHHHHHHHcCCEEEe
Confidence 347899999999998 699999999999999994 55553 356889999999987654
No 270
>PTZ00146 fibrillarin; Provisional
Probab=95.79 E-value=0.14 Score=45.63 Aligned_cols=107 Identities=12% Similarity=0.142 Sum_probs=64.9
Q ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHH-HHHHHcC-CCEEeecCCCccchhHHHHHHH
Q 018075 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRL-SIARNLG-ADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~-~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
..+....+++|++||=+|||+ |..+..+++..|- ..|++++.+++.. ++++... ...+..+..+.... ...+.+
T Consensus 123 ~g~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~p-~~y~~~- 199 (293)
T PTZ00146 123 GGVANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARYP-QKYRML- 199 (293)
T ss_pred CCcceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccCh-hhhhcc-
Confidence 345667899999999999877 7788888988863 3699999886532 2222211 11221111211111 111111
Q ss_pred hhcCCCccEEEEccCChH----HHHHHHHhhcCCCEEEEE
Q 018075 246 NAMGSGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI 281 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~ 281 (361)
...+|+||-.+..+. ....+.+.|+++|++++.
T Consensus 200 ---~~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI~ 236 (293)
T PTZ00146 200 ---VPMVDVIFADVAQPDQARIVALNAQYFLKNGGHFIIS 236 (293)
T ss_pred ---cCCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEEE
Confidence 236999998665443 234567799999999883
No 271
>PLN03139 formate dehydrogenase; Provisional
Probab=95.79 E-value=0.17 Score=47.19 Aligned_cols=92 Identities=17% Similarity=0.212 Sum_probs=63.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+|.|+|.|.+|...++.++.+|+ .|++.+++....+..++.|+... .++.+.+ ...|+|+-
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~sDvV~l 261 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLDAML--------PKCDVVVI 261 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHHHHH--------hhCCEEEE
Confidence 57899999999999999999999999 57888876544455555564321 1232222 35789988
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKTM-----STALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 285 (361)
+....... ...+..|+++..+|-++...
T Consensus 262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 294 (386)
T PLN03139 262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARGA 294 (386)
T ss_pred eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence 77644333 34667889998887776544
No 272
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=95.77 E-value=0.098 Score=43.62 Aligned_cols=82 Identities=21% Similarity=0.299 Sum_probs=54.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC---CEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA---DETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
.|.+|||.| ++++|++.++-...+|- .||.+.+++++++.++.... ..+.+.. +..+..+.+..+.+ .-...+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~-d~~~~~~lvewLkk-~~P~lN 80 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVA-DRDSRRELVEWLKK-EYPNLN 80 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeeccc-chhhHHHHHHHHHh-hCCchh
Confidence 478999997 78999999998888888 68888899999988877542 2233321 21222222222222 224688
Q ss_pred EEEEccCCh
Q 018075 254 VSFDCVGFD 262 (361)
Q Consensus 254 ~vld~~g~~ 262 (361)
+++++.|-.
T Consensus 81 vliNNAGIq 89 (245)
T COG3967 81 VLINNAGIQ 89 (245)
T ss_pred eeeeccccc
Confidence 999888743
No 273
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.75 E-value=0.15 Score=45.47 Aligned_cols=89 Identities=28% Similarity=0.335 Sum_probs=58.4
Q ss_pred EEEEECCCHHHHHH-HHHHHHcCCCEEEEEeCChhH--HHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 181 NVMIMGSGPIGLVT-LLAARAFGAPRIIITDVDVQR--LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 181 ~vlI~G~g~~G~~a-i~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
++.|+|+|.+|... ..+.+..+++.+..++.++++ .+.++++|..... .+....+. ...+|+|++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~------~~~e~ll~------~~dIDaV~i 70 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSA------EGVDGLLA------NPDIDIVFD 70 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEE------CCHHHHhc------CCCCCEEEE
Confidence 68899999999754 566666677544445555543 4577788865322 12222221 247999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEE
Q 018075 258 CVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 258 ~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
+++...+.+.....+..|-+++..
T Consensus 71 aTp~~~H~e~a~~al~aGk~VIde 94 (285)
T TIGR03215 71 ATSAKAHARHARLLAELGKIVIDL 94 (285)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEEC
Confidence 999887777777777776665543
No 274
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.74 E-value=0.093 Score=46.26 Aligned_cols=80 Identities=21% Similarity=0.235 Sum_probs=50.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCE-Ee--ecCCCccchhHHHHHHHhhcCCCc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TA--KVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+.+ .+... .+ +. .+..+..+.+.++.+. -+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDV-RSLDDHKEAVARCVAA-FGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEecc-CCHHHHHHHHHHHHHH-hCCC
Confidence 478999998 58999999998888999 57778787766554443 23211 11 22 1222333444443322 2478
Q ss_pred cEEEEccC
Q 018075 253 DVSFDCVG 260 (361)
Q Consensus 253 d~vld~~g 260 (361)
|+++++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999886
No 275
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.086 Score=46.18 Aligned_cols=82 Identities=21% Similarity=0.251 Sum_probs=52.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE--EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE--TAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++.++||.| +|++|...++.+...|+ .|+.++++.+..+.+.++.... .+..+ .+.++......++.+. ..++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence 467999998 59999999998888999 5788888776655555543221 12211 1222333333333322 24799
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 276
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.74 E-value=0.12 Score=44.44 Aligned_cols=101 Identities=13% Similarity=0.123 Sum_probs=61.6
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEe-------ecCC-----CccchhHH
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETA-------KVST-----DIEDVDTD 240 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~-------~~~~-----~~~~~~~~ 240 (361)
..+.++.+||+.|||. |.-++-||. .|. .|++++.++...+.+ ++.+..... .+.. ...|+.+
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~- 108 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFA- 108 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccC-
Confidence 3456788999999887 778888876 799 699999999877754 333322100 0000 0011111
Q ss_pred HHHHHhhcCCCccEEEEccC----C----hHHHHHHHHhhcCCCEEEEE
Q 018075 241 VGKIQNAMGSGIDVSFDCVG----F----DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 241 ~~~~~~~~~~~~d~vld~~g----~----~~~~~~~~~~l~~~G~~v~~ 281 (361)
+.......||.|+|..- . ...++.+.+.|+|||+++++
T Consensus 109 ---l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 109 ---LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred ---CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 10001246899998542 1 13477888999999975553
No 277
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=95.73 E-value=0.23 Score=47.31 Aligned_cols=103 Identities=19% Similarity=0.228 Sum_probs=63.4
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
....++++|++||=+|||+ |..+..+++..+...|++++.++++.+.+++ +|....+. .. +.... ...
T Consensus 237 ~~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~-~~---D~~~~-~~~-- 308 (427)
T PRK10901 237 ATLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVI-VG---DARDP-AQW-- 308 (427)
T ss_pred HHHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-Ec---Ccccc-hhh--
Confidence 3445678999999998765 5566677776643479999999988766643 45432111 11 11110 000
Q ss_pred hcCCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075 247 AMGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 247 ~~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~ 281 (361)
.....||.|+- |.+. ...+..+.+.|+|||+++..
T Consensus 309 ~~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvys 371 (427)
T PRK10901 309 WDGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYA 371 (427)
T ss_pred cccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 01346999973 3331 02567788899999999854
No 278
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=95.73 E-value=0.17 Score=43.07 Aligned_cols=98 Identities=20% Similarity=0.271 Sum_probs=58.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh-hcCCCcc
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGID 253 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d 253 (361)
+++|++||=+|||+ |..+..+++..+. ..|++++.++... .-++. ++. .+-.+.. .+.++.. .....+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~~----~~~v~-~i~--~D~~~~~-~~~~i~~~~~~~~~D 119 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMDP----IVGVD-FLQ--GDFRDEL-VLKALLERVGDSKVQ 119 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEecccccC----CCCcE-EEe--cCCCChH-HHHHHHHHhCCCCCC
Confidence 68899998899876 6666677777653 3799999876210 01221 121 2112211 1112211 2356799
Q ss_pred EEEEcc-----CCh------------HHHHHHHHhhcCCCEEEEEc
Q 018075 254 VSFDCV-----GFD------------KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 254 ~vld~~-----g~~------------~~~~~~~~~l~~~G~~v~~g 282 (361)
+|+... |.+ ..++.+.+.|+|||+++..-
T Consensus 120 ~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~~ 165 (209)
T PRK11188 120 VVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKV 165 (209)
T ss_pred EEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 999744 211 25677888999999998853
No 279
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.11 Score=45.90 Aligned_cols=84 Identities=25% Similarity=0.334 Sum_probs=52.2
Q ss_pred CCCCCEEEEEC-CC-HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-----cCCCEE--eecC-CCccchhHHHHHHH
Q 018075 176 VGPETNVMIMG-SG-PIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----LGADET--AKVS-TDIEDVDTDVGKIQ 245 (361)
Q Consensus 176 ~~~g~~vlI~G-~g-~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~~--~~~~-~~~~~~~~~~~~~~ 245 (361)
+.++.++||.| +| ++|.+.++.+...|+ .|+.+++++++.+...+ ++...+ +..+ .+..+....+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 45678999998 46 899999999999999 57777777765443321 343222 1111 12223334444433
Q ss_pred hhcCCCccEEEEccCC
Q 018075 246 NAMGSGIDVSFDCVGF 261 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~ 261 (361)
+. .+++|+++++.|.
T Consensus 93 ~~-~g~id~li~~ag~ 107 (262)
T PRK07831 93 ER-LGRLDVLVNNAGL 107 (262)
T ss_pred HH-cCCCCEEEECCCC
Confidence 22 2479999999984
No 280
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.69 E-value=0.17 Score=43.25 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=31.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
+..+|+|+|+|++|...++.+...|...+..+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999888888876
No 281
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.087 Score=46.92 Aligned_cols=82 Identities=24% Similarity=0.248 Sum_probs=51.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE--EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE--TAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
.+.++||.| +|++|.+.++.+...|+ .|++++++.++.+.+.+..... .+..+ .+.++....+.++.+. -+++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence 357899998 59999999998888899 6888888887766554432211 11111 1222333333333221 24699
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 282
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.67 E-value=0.18 Score=43.98 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=30.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
+.+|+|.|+|++|..+++.+...|...+..+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999998888887543
No 283
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.67 E-value=0.14 Score=42.30 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=29.1
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
+|+|+|+|++|...++.+...|...+..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999998889998888888765
No 284
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.67 E-value=0.19 Score=42.56 Aligned_cols=88 Identities=19% Similarity=0.201 Sum_probs=56.2
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
-.|.+++|+|.|.+|..+++.+...|+ .|++.+.+.++.+.+ +.+++..+ . . + ++. ...+|++
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~v-~--~--~-------~l~---~~~~Dv~ 89 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATVV-A--P--E-------EIY---SVDADVF 89 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEEE-c--c--h-------hhc---cccCCEE
Confidence 367899999999999999999999999 677888888776554 44464321 1 1 1 111 2357888
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
+-|..........++.|+ ++++.-+
T Consensus 90 vp~A~~~~I~~~~~~~l~--~~~v~~~ 114 (200)
T cd01075 90 APCALGGVINDDTIPQLK--AKAIAGA 114 (200)
T ss_pred EecccccccCHHHHHHcC--CCEEEEC
Confidence 865433324444455554 3444433
No 285
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.66 E-value=0.091 Score=46.35 Aligned_cols=82 Identities=21% Similarity=0.246 Sum_probs=52.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCC-EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++.++||.| +|++|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+ .+..+....+.++.+. -+++|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence 568899998 58999999998888999 5777888777665443 34321 111111 2223344444444332 24799
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
+++++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
No 286
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.66 E-value=0.14 Score=47.86 Aligned_cols=73 Identities=19% Similarity=0.370 Sum_probs=55.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
-.+.++||+|+|-+|..++..+...|...++.+.+..+|. ++++++|+..+ .+ .+...-+ ..+|+|
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l-------~el~~~l-----~~~DvV 242 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-AL-------EELLEAL-----AEADVV 242 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cH-------HHHHHhh-----hhCCEE
Confidence 5789999999999999999999999987888888877765 57888995432 11 1111112 469999
Q ss_pred EEccCCh
Q 018075 256 FDCVGFD 262 (361)
Q Consensus 256 ld~~g~~ 262 (361)
|.+++.+
T Consensus 243 issTsa~ 249 (414)
T COG0373 243 ISSTSAP 249 (414)
T ss_pred EEecCCC
Confidence 9998877
No 287
>PRK06484 short chain dehydrogenase; Validated
Probab=95.66 E-value=0.31 Score=47.70 Aligned_cols=106 Identities=24% Similarity=0.305 Sum_probs=67.1
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (361)
..|.++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ ++++... .+..+ .+..+....+.++.+. -+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence 3578889998 59999999998888999 678888877766544 3355332 12111 2223344444444332 2479
Q ss_pred cEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075 253 DVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 253 d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
|+++++.|.. ...+.+++.+..+|+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 9999988742 0233445566677999988754
No 288
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=95.65 E-value=0.034 Score=49.79 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=28.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 211 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~ 211 (361)
+..+|||+|+|++|.-|+|++.+.|..++=.+|.
T Consensus 65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~ 98 (427)
T KOG2017|consen 65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDY 98 (427)
T ss_pred CCccEEEEccCCCCCHHHHHHHHcCCCeeccccc
Confidence 5689999999999999999999999876555543
No 289
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.62 E-value=0.31 Score=42.79 Aligned_cols=80 Identities=28% Similarity=0.343 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCCE---EeecCCCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE---TAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|.+.++.+...|+ .|+.+++++...+..+++ +.+. ..++ .+..+....+.++... -.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADL-ETYAGAQAAMAAAVEA-FG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeC-CCHHHHHHHHHHHHHH-cC
Confidence 467899998 59999999998888999 577777765443444433 3221 1222 2223334444444332 24
Q ss_pred CccEEEEccC
Q 018075 251 GIDVSFDCVG 260 (361)
Q Consensus 251 ~~d~vld~~g 260 (361)
++|+++++.|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999887
No 290
>PRK00536 speE spermidine synthase; Provisional
Probab=95.60 E-value=0.079 Score=46.59 Aligned_cols=99 Identities=6% Similarity=-0.136 Sum_probs=64.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
...++|||+|+|- |-++-.++|.-. .|+.++-+++-.++++++-...-..++...-.+... +.+.....+|+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~---~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQ---LLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeeh---hhhccCCcCCEEE
Confidence 4459999998776 667788888763 799999999988888883211000011110111111 1121235799986
Q ss_pred E-ccCChHHHHHHHHhhcCCCEEEEE
Q 018075 257 D-CVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 257 d-~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
- +...++..+.+.+.|+++|.++.-
T Consensus 145 vDs~~~~~fy~~~~~~L~~~Gi~v~Q 170 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKEDGVFISV 170 (262)
T ss_pred EcCCCChHHHHHHHHhcCCCcEEEEC
Confidence 4 466677788999999999988864
No 291
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.60 E-value=0.17 Score=44.04 Aligned_cols=81 Identities=21% Similarity=0.313 Sum_probs=50.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|..+++.+...|+ +|+.++++.++.+.+ ++.+... .+..+ .+..+..+.+..+... ..
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 578999998 59999999998888998 678888877654332 2234321 12222 1222333334333321 24
Q ss_pred CccEEEEccC
Q 018075 251 GIDVSFDCVG 260 (361)
Q Consensus 251 ~~d~vld~~g 260 (361)
++|.+|.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 292
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=95.58 E-value=0.24 Score=47.45 Aligned_cols=101 Identities=16% Similarity=0.252 Sum_probs=63.2
Q ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhh
Q 018075 173 RANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
..++++|++||=+|+|+ |..++.+++.. +...+++++.++++.+.++ ++|...+..... +..+....+
T Consensus 245 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~~~~~~--- 317 (444)
T PRK14902 245 ALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKAL---DARKVHEKF--- 317 (444)
T ss_pred HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC---Ccccccchh---
Confidence 35678999999888765 55566667665 2337999999998876654 356554322222 221111111
Q ss_pred cCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075 248 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 248 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~ 281 (361)
...||.|+- |+|.. ..+..+++.|+|||+++..
T Consensus 318 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys 378 (444)
T PRK14902 318 -AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS 378 (444)
T ss_pred -cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 256999975 33321 2467788899999999853
No 293
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.57 E-value=0.3 Score=44.90 Aligned_cols=90 Identities=21% Similarity=0.247 Sum_probs=62.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+|.|+|.|.+|...++.++.+|. .|++.+++.+.. ...+++... .++.+.+ ...|+|+-
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~ell--------~~aDiV~l 210 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLEELL--------RESDFVSL 210 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHHHHH--------hhCCEEEE
Confidence 57899999999999999999999999 688887765433 233444321 1222222 35799998
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKTM-----STALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 285 (361)
++...... ...+..|+++..++-++...
T Consensus 211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~ 243 (333)
T PRK13243 211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK 243 (333)
T ss_pred eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence 88754322 35678899999888776544
No 294
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.57 E-value=0.18 Score=46.37 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
...+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999889999875
No 295
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.57 E-value=0.17 Score=45.30 Aligned_cols=94 Identities=24% Similarity=0.283 Sum_probs=58.4
Q ss_pred CEEEEECCCHHHHH-HHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 180 TNVMIMGSGPIGLV-TLLAARAFGAPRIIITDVDVQ--RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 180 ~~vlI~G~g~~G~~-ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
-++.|+|+|.+|.. +..+.+.-+.+.+..++.+++ ....++++|..... .++...+.. ..-.++|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~---~~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAM---PEFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhC---cCCCCCCEEE
Confidence 47899999999986 555665556755555555554 34667778854321 122222211 0115799999
Q ss_pred EccCChHHHHHHHHhhcCCCEEEEEc
Q 018075 257 DCVGFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 257 d~~g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
++.+...+.+.....+..|-+++...
T Consensus 76 ~AT~a~~H~e~a~~a~eaGk~VID~s 101 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAGIRAIDLT 101 (302)
T ss_pred ECCCHHHHHHHHHHHHHcCCeEEECC
Confidence 99998867666666666666555543
No 296
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=95.57 E-value=0.26 Score=47.31 Aligned_cols=102 Identities=22% Similarity=0.302 Sum_probs=63.1
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+......+|++||=+|+|+ |..+..+++.++ ...|++++.++++.+.++ ++|...+.....+..++ .
T Consensus 243 ~~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~-------~ 314 (445)
T PRK14904 243 CLLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSF-------S 314 (445)
T ss_pred HHhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCccccc-------c
Confidence 3445678999999998755 444445555442 237999999998876554 45655432221211111 1
Q ss_pred hhcCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEEc
Q 018075 246 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 246 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g 282 (361)
....||.||- |+|.. ..+..+.+.|+|||+++..-
T Consensus 315 --~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvyst 377 (445)
T PRK14904 315 --PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYAT 377 (445)
T ss_pred --cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1346999984 44421 24677888999999998643
No 297
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.11 Score=44.60 Aligned_cols=78 Identities=21% Similarity=0.240 Sum_probs=49.6
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC-CCccchhHHHHHHHhhcCCCccEEEE
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.+++|.| +|++|...+..+...|+ .|+.+++++++.+.+++++-......+ .+.++..+....+ ...++|+++.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~ 77 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV 77 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence 4689998 69999999988888899 688888877766555554322222211 1222333333333 2357999999
Q ss_pred ccCC
Q 018075 258 CVGF 261 (361)
Q Consensus 258 ~~g~ 261 (361)
+.|.
T Consensus 78 ~ag~ 81 (225)
T PRK08177 78 NAGI 81 (225)
T ss_pred cCcc
Confidence 8754
No 298
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=95.55 E-value=0.12 Score=46.46 Aligned_cols=56 Identities=13% Similarity=0.208 Sum_probs=39.0
Q ss_pred HHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh---H-HHHHHHcC
Q 018075 168 VHACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---R-LSIARNLG 223 (361)
Q Consensus 168 ~~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~---~-~~~~~~lg 223 (361)
+.+++...+ -++.++||+|+|+.+.+++..+...|+..+..+.++++ | .+++++++
T Consensus 112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 334544333 36679999999999998777777789888888888742 3 34445554
No 299
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=95.55 E-value=0.25 Score=42.68 Aligned_cols=107 Identities=19% Similarity=0.321 Sum_probs=68.2
Q ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcCCC----EEeecCCCccchhHHHHHHH
Q 018075 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~ 245 (361)
++....+++.+||-+|||. |..+..+++..+ ...+++++.+++..+.+++.-.. ..+.+.. .+.... .
T Consensus 44 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~----~ 116 (239)
T PRK00216 44 IKWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEAL----P 116 (239)
T ss_pred HHHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--cccccC----C
Confidence 3444566889999999887 888888888775 23799999999887777664211 1011100 111110 0
Q ss_pred hhcCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 246 NAMGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 246 ~~~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
.....+|+|+... .....+..+.+.|+++|+++.+....
T Consensus 117 -~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~~ 161 (239)
T PRK00216 117 -FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEFSK 161 (239)
T ss_pred -CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEecC
Confidence 1135689987532 12346788899999999998876443
No 300
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.1 Score=45.81 Aligned_cols=82 Identities=22% Similarity=0.193 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
+|.++||.| +|++|...++.+...|++ ++.+++++++.+..+++ +.. ..+..+ .+.++....+.++... -.+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence 467899998 589999999888888995 66666766665444443 322 112111 1222333334443332 247
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 301
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=95.52 E-value=0.046 Score=49.15 Aligned_cols=92 Identities=17% Similarity=0.291 Sum_probs=58.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++.+||-+|||. |..+..+++ .|. .|+++|.+++..+.+++. +...-... .+.... . ....+|
T Consensus 120 ~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~----~D~~~~--~----~~~~fD 186 (287)
T PRK12335 120 KPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGL----YDINSA--S----IQEEYD 186 (287)
T ss_pred CCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEE----echhcc--c----ccCCcc
Confidence 445899999876 777777776 477 799999999877665542 33111110 111110 0 135799
Q ss_pred EEEEccC--------ChHHHHHHHHhhcCCCEEEEEc
Q 018075 254 VSFDCVG--------FDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 254 ~vld~~g--------~~~~~~~~~~~l~~~G~~v~~g 282 (361)
+|+.+.- -+..+..+.+.|+|||.++.+.
T Consensus 187 ~I~~~~vl~~l~~~~~~~~l~~~~~~LkpgG~~l~v~ 223 (287)
T PRK12335 187 FILSTVVLMFLNRERIPAIIKNMQEHTNPGGYNLIVC 223 (287)
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9987532 1235777888999999976643
No 302
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.52 E-value=0.25 Score=43.14 Aligned_cols=82 Identities=23% Similarity=0.391 Sum_probs=50.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|.+|...++.+...|. .|+.++++.++.+.+ .++ +... .+..+ .+..+..+.+.++... ..
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 69999999998888899 577777777654332 222 3221 11111 2223333444444332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|++|.+.+.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998863
No 303
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.13 Score=45.38 Aligned_cols=81 Identities=22% Similarity=0.335 Sum_probs=49.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-Hc--CCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
++.++||.| +|++|...+..+...|+ .|+++++++++.+.+. ++ +.. ..+..+ .+..+.......+.. .++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 467899998 69999999998888999 5788888876654432 22 111 111111 112222222222322 357
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|.++.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 9999998875
No 304
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.18 Score=45.48 Aligned_cols=82 Identities=20% Similarity=0.311 Sum_probs=51.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++ .+.. ..+..+ .+..+..+.+..+.+. -+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 357899998 59999999998888899 678888887665433 22 2322 112111 1223333444433322 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 305
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.52 E-value=0.2 Score=46.02 Aligned_cols=36 Identities=31% Similarity=0.478 Sum_probs=31.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
.+.+|+|+|+|++|..++..+...|...+..+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998888888763
No 306
>PRK08328 hypothetical protein; Provisional
Probab=95.52 E-value=0.22 Score=43.12 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=30.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
.+.+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888743
No 307
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.51 E-value=0.15 Score=38.05 Aligned_cols=89 Identities=13% Similarity=0.231 Sum_probs=57.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
+|.+|||+|+|.+|..-++.+...|+ .+..++... +..+ +.-.... ..+.. .-.++++|+.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~ 66 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA 66 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence 57899999999999999999999999 566665554 2222 2111111 12211 1257999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+.+.+..-+.+....+..|.++-+....
T Consensus 67 at~d~~~n~~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 67 ATDDPELNEAIYADARARGILVNVVDDP 94 (103)
T ss_dssp -SS-HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred cCCCHHHHHHHHHHHhhCCEEEEECCCc
Confidence 9998866666667777788877765433
No 308
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.14 Score=44.72 Aligned_cols=82 Identities=20% Similarity=0.339 Sum_probs=49.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|.+|...++.+...|+ .|+.+++++++.+ ..+++ +.. ..+..+ .+..+.......+.+. ..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-FG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 567899998 59999999998888898 6788877765543 22222 211 112211 1222233333333222 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998884
No 309
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.50 E-value=0.35 Score=36.84 Aligned_cols=86 Identities=22% Similarity=0.241 Sum_probs=59.3
Q ss_pred EEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHH-HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 181 NVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
++.|+|+|..|..-..-++.. +.+.+.+++.++++.+. +++++.. . +. ++.+.+. ..++|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~~~~ll~------~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----DLEELLA------DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----SHHHHHH------HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----HHHHHHH------hhcCCEEEE
Confidence 588999999998887655555 45334456777766654 5667876 2 21 3333322 247999999
Q ss_pred ccCChHHHHHHHHhhcCCCEEE
Q 018075 258 CVGFDKTMSTALNATRPGGKVC 279 (361)
Q Consensus 258 ~~g~~~~~~~~~~~l~~~G~~v 279 (361)
++....+.+.+..++..|-.++
T Consensus 69 ~tp~~~h~~~~~~~l~~g~~v~ 90 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGKHVL 90 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTSEEE
T ss_pred ecCCcchHHHHHHHHHcCCEEE
Confidence 9998888888888888887544
No 310
>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]
Probab=95.49 E-value=0.052 Score=46.96 Aligned_cols=97 Identities=20% Similarity=0.267 Sum_probs=60.7
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-CCEEeecC--CCccchhHHHHHHHhhcCCCccEE
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADETAKVS--TDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
|.+||=.|||+ |+...-||| +|+ .|.++|.+++..+.+++-. .++..+.. ...+-....++.. ...||.|
T Consensus 90 g~~ilDvGCGg-GLLSepLAr-lga-~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~----~~~fDaV 162 (282)
T KOG1270|consen 90 GMKILDVGCGG-GLLSEPLAR-LGA-QVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGL----TGKFDAV 162 (282)
T ss_pred CceEEEeccCc-cccchhhHh-hCC-eeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhc----cccccee
Confidence 37788889987 888888888 678 6999999999888887642 11111100 0000001111111 3459998
Q ss_pred EEcc------CChHHHHHHHHhhcCCCEEEEEc
Q 018075 256 FDCV------GFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 256 ld~~------g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
+..- .-.+.++.+++.|+|+|++++.-
T Consensus 163 vcsevleHV~dp~~~l~~l~~~lkP~G~lfitt 195 (282)
T KOG1270|consen 163 VCSEVLEHVKDPQEFLNCLSALLKPNGRLFITT 195 (282)
T ss_pred eeHHHHHHHhCHHHHHHHHHHHhCCCCceEeee
Confidence 7632 11235677889999999998754
No 311
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.47 E-value=0.29 Score=42.72 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=68.2
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
.+.....++|-+|++. |+.++.+|+.+ +. ++++++.++++.+.+++ .|..+-+.+.. ++..+.+.++...
T Consensus 75 ~~~~~ak~iLEiGT~~-GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~ 150 (247)
T PLN02589 75 LKLINAKNTMEIGVYT-GYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIED 150 (247)
T ss_pred HHHhCCCEEEEEeChh-hHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhc
Confidence 4445667899999743 77888888876 34 79999999987776644 46433222222 4555666655432
Q ss_pred c--CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEE
Q 018075 248 M--GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCL 280 (361)
Q Consensus 248 ~--~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~ 280 (361)
+ ...||+||--.... ..++.+++.|++||.++.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 1 25899998755433 356677899999998775
No 312
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.47 E-value=0.26 Score=41.62 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
...+|+|.|+|++|...++.+...|...++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999778888876
No 313
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.47 Score=42.03 Aligned_cols=78 Identities=27% Similarity=0.420 Sum_probs=47.8
Q ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE----EeecCCCccchhHHHHHHHhhcCCC
Q 018075 181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE----TAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
+++|.| +|++|..+++.+...|+ .|+.+++++++.+.+ + ..+... ..+. .+..+......++... ..+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDI-SDYDAVAAFAADIHAA-HGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeC-CCHHHHHHHHHHHHHh-cCC
Confidence 689998 59999999998888998 577777776654322 2 233321 1232 2222333333333322 346
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 314
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.15 Score=44.15 Aligned_cols=83 Identities=18% Similarity=0.336 Sum_probs=51.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CC-C---EEeecCC-CccchhHHHHHHHhh
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GA-D---ETAKVST-DIEDVDTDVGKIQNA 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~-~---~~~~~~~-~~~~~~~~~~~~~~~ 247 (361)
++.+++|.| +|++|...++.+...|+ .|+.+++++++.+.+ +++ +. . ...+... +..++.+...++...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 467999998 59999999998888899 578888887665433 222 21 1 1122211 122334444444433
Q ss_pred cCCCccEEEEccCC
Q 018075 248 MGSGIDVSFDCVGF 261 (361)
Q Consensus 248 ~~~~~d~vld~~g~ 261 (361)
.+..+|+++.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33578999998884
No 315
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.44 E-value=0.51 Score=42.15 Aligned_cols=60 Identities=27% Similarity=0.359 Sum_probs=46.4
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE--eCChhHHHHHHHcCCCEEee
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAK 229 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~ 229 (361)
+.+++.++||++|+=--+|.+|.+.+.+|+..|.+.++++ ..+.+|.++++.+|+..+..
T Consensus 53 Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 53 AEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 3445779999955443379999999999999999655555 35778999999999876654
No 316
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=95.44 E-value=0.096 Score=47.98 Aligned_cols=105 Identities=22% Similarity=0.302 Sum_probs=66.0
Q ss_pred HHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 171 CRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 171 l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
++...+ +++.+||-+|+|. |..+..+++..+...++++|.+++-.+.+++.....-+.+.. .+.. ++. ...
T Consensus 105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~e----~lp-~~~ 176 (340)
T PLN02490 105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDAE----DLP-FPT 176 (340)
T ss_pred HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccHH----hCC-CCC
Confidence 333333 5788999999876 777778888775457999999988777776632111011101 1211 110 013
Q ss_pred CCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEcc
Q 018075 250 SGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 250 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
..||+|+.+.. ....++++.+.|++||+++.++.
T Consensus 177 ~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~~ 216 (340)
T PLN02490 177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGP 216 (340)
T ss_pred CceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence 46999887431 12467889999999999987753
No 317
>PRK08589 short chain dehydrogenase; Validated
Probab=95.41 E-value=0.14 Score=45.44 Aligned_cols=81 Identities=21% Similarity=0.326 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCC-EE--eecCCCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GAD-ET--AKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~--~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| ++++|.+.++.+...|+ .|+.++++++..+.++++ +.. .. .++ .+..+....+.++.+. -+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDI-SDEQQVKDFASEIKEQ-FG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeec-CCHHHHHHHHHHHHHH-cC
Confidence 577899998 59999999998888899 577777774333334333 321 11 222 2223344444444332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 69999998864
No 318
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.18 Score=43.60 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=51.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
+|.+++|.| ++++|.+.+..+...|+ .|+.+.++.++.+. +++.+... .+..+ .+.++..+.+.++.+..+.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 467899998 58999999998888999 57777777765432 22334322 11111 2333444444444433233
Q ss_pred CccEEEEccC
Q 018075 251 GIDVSFDCVG 260 (361)
Q Consensus 251 ~~d~vld~~g 260 (361)
.+|+++++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
No 319
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.41 Score=41.78 Aligned_cols=107 Identities=16% Similarity=0.223 Sum_probs=60.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHH-HHHHHc---CCCE-EeecC-CCccchhHHHHHHHhh--
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRL-SIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNA-- 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~-~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~-- 247 (361)
.+.++||.| +|++|.+.++.+...|++ |+.+ .++.++. +...++ +... .+..+ .+..+......++.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 467899998 589999999988889995 5544 3443433 222222 2211 11111 1112233333333221
Q ss_pred ---cCCCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccCC
Q 018075 248 ---MGSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 248 ---~~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+..++|+++++.|.. + ..+.+++.+...|+++.++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 124799999988732 0 2233555666779999887543
No 320
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.39 E-value=0.18 Score=44.48 Aligned_cols=82 Identities=17% Similarity=0.254 Sum_probs=49.7
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
+|.++||.|++ ++|.+.++.+...|+ .|+.++++++.. ++.++++....+..+ .+.++..+.+.++.+. -
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE-W 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-c
Confidence 57889999843 899999998888999 566666664432 233344432222222 2233444444444332 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++++.|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 479999998863
No 321
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A ....
Probab=95.38 E-value=0.13 Score=41.31 Aligned_cols=98 Identities=19% Similarity=0.372 Sum_probs=63.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+++.+||=+|||. |.....+++.. +. .++++|.+++..+.+++ ++.+.+.-... +..+ +.+. -..
T Consensus 2 ~~~~~iLDlGcG~-G~~~~~l~~~~~~~~-~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~---d~~~-l~~~---~~~ 72 (152)
T PF13847_consen 2 KSNKKILDLGCGT-GRLLIQLAKELNPGA-KIIGVDISEEMIEYAKKRAKELGLDNIEFIQG---DIED-LPQE---LEE 72 (152)
T ss_dssp TTTSEEEEET-TT-SHHHHHHHHHSTTTS-EEEEEESSHHHHHHHHHHHHHTTSTTEEEEES---BTTC-GCGC---SST
T ss_pred CCCCEEEEecCcC-cHHHHHHHHhcCCCC-EEEEEECcHHHHHHhhcccccccccccceEEe---ehhc-cccc---cCC
Confidence 5678888899876 77777888543 45 79999999998777766 56552222212 2222 1100 015
Q ss_pred CccEEEEcc-----CCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075 251 GIDVSFDCV-----GFD-KTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 251 ~~d~vld~~-----g~~-~~~~~~~~~l~~~G~~v~~g~ 283 (361)
.||+|+... ... ..++.+.+.|+++|.++....
T Consensus 73 ~~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~ 111 (152)
T PF13847_consen 73 KFDIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP 111 (152)
T ss_dssp TEEEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeeEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence 899999863 212 367889999999999987643
No 322
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.36 Score=41.87 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=32.5
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 221 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 221 (361)
.++||.| +|++|...+..+...|+ .|+.+++++++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence 4688998 69999988887778899 57888888877665544
No 323
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.36 E-value=0.22 Score=44.35 Aligned_cols=95 Identities=19% Similarity=0.216 Sum_probs=65.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC------CC-EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------AD-ETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.+|||+|.|. |-++-.++|....++++.++-+++-.++++++- ++ .-..+ ...|..+.+++. ..++
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i--~i~Dg~~~v~~~----~~~f 150 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEI--IIDDGVEFLRDC----EEKF 150 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEE--EeccHHHHHHhC----CCcC
Confidence 5999998655 557778888888889999999999999888842 11 10010 012444444432 4589
Q ss_pred cEEEE-ccCC---------hHHHHHHHHhhcCCCEEEEE
Q 018075 253 DVSFD-CVGF---------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 253 d~vld-~~g~---------~~~~~~~~~~l~~~G~~v~~ 281 (361)
|+||- +... .+.++.+-+.|+++|.++.-
T Consensus 151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q 189 (282)
T COG0421 151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ 189 (282)
T ss_pred CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence 99975 3322 35788899999999998876
No 324
>TIGR00537 hemK_rel_arch HemK-related putative methylase. The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.
Probab=95.36 E-value=0.13 Score=42.68 Aligned_cols=94 Identities=22% Similarity=0.294 Sum_probs=58.4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
...++++||-+|+|. |..+..+++. +. .+++++.+++..+.+++ .+..... +. .++.+. ...
T Consensus 16 ~~~~~~~vLdlG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~---~d~~~~-------~~~ 81 (179)
T TIGR00537 16 RELKPDDVLEIGAGT-GLVAIRLKGK-GK-CILTTDINPFAVKELRENAKLNNVGLDV-VM---TDLFKG-------VRG 81 (179)
T ss_pred HhcCCCeEEEeCCCh-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHHcCCceEE-EE---cccccc-------cCC
Confidence 345668888898766 6666666664 45 79999999988776655 2322111 11 121111 124
Q ss_pred CccEEEEccCC---------------------------hHHHHHHHHhhcCCCEEEEEc
Q 018075 251 GIDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 251 ~~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g 282 (361)
.+|+|+.+..- ...++.+.+.|+++|+++.+.
T Consensus 82 ~fD~Vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~ 140 (179)
T TIGR00537 82 KFDVILFNPPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQ 140 (179)
T ss_pred cccEEEECCCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEE
Confidence 78999865210 124667778999999998874
No 325
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.17 Score=44.26 Aligned_cols=81 Identities=25% Similarity=0.273 Sum_probs=50.2
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-H---cCCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+. + .+.. ..+..+ .+..+..+.+.++... -.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence 46889998 58999999999888999 6888877776544332 2 2221 122211 2223344444444332 246
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 9999998873
No 326
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.34 E-value=0.4 Score=40.20 Aligned_cols=77 Identities=25% Similarity=0.371 Sum_probs=47.4
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
-++.+++|+| +|.+|..++..+...|. .++.+.++.++.+.+ +++ +.. +...+. .+..+ +.+. -.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~~-~~~~----~~ 96 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDAA-RAAA----IK 96 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHHH-HHHH----Hh
Confidence 3678999998 59999988888887887 677777777765433 323 222 111111 12111 1111 14
Q ss_pred CccEEEEccCCh
Q 018075 251 GIDVSFDCVGFD 262 (361)
Q Consensus 251 ~~d~vld~~g~~ 262 (361)
++|+||.+....
T Consensus 97 ~~diVi~at~~g 108 (194)
T cd01078 97 GADVVFAAGAAG 108 (194)
T ss_pred cCCEEEECCCCC
Confidence 689999988765
No 327
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=95.34 E-value=0.35 Score=38.97 Aligned_cols=88 Identities=17% Similarity=0.194 Sum_probs=57.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
++.+|.|+|.|.-|.+-.+-+|-.|.+++++........+.+++-|... .+..+.+ ...|+|+-
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv--------~~aDvV~~ 66 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEV--------MSVAEAV--------KKADVVML 66 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHH--------HC-SEEEE
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCee--------ccHHHHH--------hhCCEEEE
Confidence 5789999999999999999999999976666665555888889888643 1333333 35899998
Q ss_pred ccCCh---HHH-HHHHHhhcCCCEEEEE
Q 018075 258 CVGFD---KTM-STALNATRPGGKVCLI 281 (361)
Q Consensus 258 ~~g~~---~~~-~~~~~~l~~~G~~v~~ 281 (361)
.+... ..+ +.+...|++|-.++..
T Consensus 67 L~PD~~q~~vy~~~I~p~l~~G~~L~fa 94 (165)
T PF07991_consen 67 LLPDEVQPEVYEEEIAPNLKPGATLVFA 94 (165)
T ss_dssp -S-HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred eCChHHHHHHHHHHHHhhCCCCCEEEeC
Confidence 88743 123 4455678888877654
No 328
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.33 E-value=0.36 Score=38.27 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=28.3
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
+|+|.|+|++|...++.+...|...+..+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 58999999999999999999999888888754
No 329
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=95.32 E-value=0.39 Score=46.16 Aligned_cols=98 Identities=20% Similarity=0.318 Sum_probs=63.6
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
++++|++||=+.|++ |-=++++|..++ -..+++.+.+..|.+.+ +++|...+.....+...+.. ..+
T Consensus 110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~-------~~~ 181 (470)
T PRK11933 110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGA-------ALP 181 (470)
T ss_pred CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhh-------hch
Confidence 679999999987655 334556666653 22689999999987554 55788775544332222111 113
Q ss_pred CCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEE
Q 018075 250 SGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCL 280 (361)
Q Consensus 250 ~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~ 280 (361)
..||.||- |+|.. ..+..+++.|+|||++|-
T Consensus 182 ~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVY 240 (470)
T PRK11933 182 ETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVY 240 (470)
T ss_pred hhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 46888864 66542 356678899999998853
No 330
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.31 E-value=0.21 Score=46.33 Aligned_cols=36 Identities=31% Similarity=0.451 Sum_probs=31.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
...+|||+|+|++|..+++.+...|...+..+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457999999999999999999999999898887654
No 331
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.31 E-value=0.18 Score=43.56 Aligned_cols=80 Identities=16% Similarity=0.193 Sum_probs=49.5
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
+.++||.| +|++|.+.++.+...|+ .|+.++++++ ..+.+++.++..+ .++ .+..+....+.++... -.++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADF-STNAGIMAFIDELKQH-TDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHHHhh-CCCccEE
Confidence 46889998 58999999998888999 5666766553 3344444553321 122 2223444444444321 2469999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 332
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.29 E-value=0.15 Score=40.06 Aligned_cols=97 Identities=19% Similarity=0.311 Sum_probs=57.0
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-------------------hHH----HHHHHcCC-CEEeecCCCc
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-------------------QRL----SIARNLGA-DETAKVSTDI 234 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-------------------~~~----~~~~~lg~-~~~~~~~~~~ 234 (361)
..+|+|.|+|++|..++..+...|...+..+|.+. .|. +.++++.. ..+..+.
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~--- 78 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP--- 78 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence 46899999999999999999889998888887432 122 23333432 2222211
Q ss_pred cch-hHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCC-EEEEEc
Q 018075 235 EDV-DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG-KVCLIG 282 (361)
Q Consensus 235 ~~~-~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G-~~v~~g 282 (361)
..+ .....++. .++|+||+|.........+.+.+...+ .++..+
T Consensus 79 ~~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 79 EKIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp SHCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred cccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 122 12222222 478999999998755445555444444 344443
No 333
>PRK06128 oxidoreductase; Provisional
Probab=95.29 E-value=0.49 Score=42.68 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=60.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh------HHHHHHHcCCCEE-eecC-CCccchhHHHHHHHhhc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ------RLSIARNLGADET-AKVS-TDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~------~~~~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~ 248 (361)
.+.++||.| +|++|.+.+..+...|++ |+.+..+.+ ..+.+++.+.... +..+ .+..+..+.+.++.+.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE- 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence 468999998 599999999988889994 555544322 1223333443221 1111 1222333334333322
Q ss_pred CCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075 249 GSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 249 ~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
-.++|+++++.|.. ...+.+.+.+..+|+++.++..
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~ 193 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI 193 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence 24799999988741 0233444556778899887643
No 334
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.29 E-value=0.14 Score=43.78 Aligned_cols=77 Identities=31% Similarity=0.359 Sum_probs=49.2
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.+++|.| +|.+|...++.+...|+ .++.++++.++.+.++..+.... .+. .+..++.....++ .+.++|+++.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~---~~~~~d~vi~ 76 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDV-ADPASVAGLAWKL---DGEALDAAVY 76 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecC-CCHHHHHHHHHHh---cCCCCCEEEE
Confidence 4688998 69999999987777898 57778888777766665554321 222 1122222222222 2357999999
Q ss_pred ccCC
Q 018075 258 CVGF 261 (361)
Q Consensus 258 ~~g~ 261 (361)
+.|.
T Consensus 77 ~ag~ 80 (222)
T PRK06953 77 VAGV 80 (222)
T ss_pred CCCc
Confidence 8764
No 335
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=95.26 E-value=0.081 Score=51.24 Aligned_cols=103 Identities=18% Similarity=0.267 Sum_probs=66.9
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC--CCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+...++++++||-+|||. |..++.+++..+. .+++++.+++..+.+++.. ...-+.+.. .++.. . ....
T Consensus 260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~--~d~~~----~-~~~~ 330 (475)
T PLN02336 260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV--ADCTK----K-TYPD 330 (475)
T ss_pred HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE--cCccc----C-CCCC
Confidence 344567899999999876 6677788888887 7999999998887776532 111011100 11110 0 0013
Q ss_pred CCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEcc
Q 018075 250 SGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 250 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
..||+|+.... ....++.+.+.|+|||+++....
T Consensus 331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 370 (475)
T PLN02336 331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISDY 370 (475)
T ss_pred CCEEEEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 46999987321 12478889999999999987653
No 336
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.18 Score=44.27 Aligned_cols=81 Identities=19% Similarity=0.158 Sum_probs=49.4
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCC-EE--eecC-CCccchhHHHHHHHhhcCCCc
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ET--AKVS-TDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (361)
+.++||.| +|++|...+..+...|+ .|+.++++.++.+.+ +++... .+ +..+ .+..+..+.+.++... .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence 46899998 69999999998888899 677788877765443 333211 11 1111 2223333333333322 2358
Q ss_pred cEEEEccCC
Q 018075 253 DVSFDCVGF 261 (361)
Q Consensus 253 d~vld~~g~ 261 (361)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998763
No 337
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.17 Score=44.82 Aligned_cols=80 Identities=31% Similarity=0.330 Sum_probs=52.0
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcC-CCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLG-ADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
+.++||.| +|++|...++.+...|+ .|+.+++++++.+. .++++ ...+ .|+ .+.+++.+.+.++.+. -.++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDV-TDPASFAAFLDAVEAD-LGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence 57899998 59999999998888899 57777787776543 34444 2221 122 2233444444444432 257999
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
++++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 338
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.22 E-value=0.56 Score=41.27 Aligned_cols=104 Identities=18% Similarity=0.268 Sum_probs=61.2
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCCh---hHH-HHHHHcCCCE--E--eecCCCccchhHHHHHHHh
Q 018075 178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRL-SIARNLGADE--T--AKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~---~~~-~~~~~lg~~~--~--~~~~~~~~~~~~~~~~~~~ 246 (361)
.|.++||.|+ +++|.+.++.+...|+ .|+.+.++. ++. ++.+++.... . .|. .+.++....+.++.+
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDV-TSDEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCC-CCHHHHHHHHHHHHH
Confidence 4678999984 5999999998888999 466664432 233 2334442111 1 222 233444445554433
Q ss_pred hcCCCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075 247 AMGSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~ 284 (361)
. -+++|+++++.|.. + ..+..++.|.++|+++.++..
T Consensus 84 ~-~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~ 149 (257)
T PRK08594 84 E-VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYL 149 (257)
T ss_pred h-CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEccc
Confidence 2 25799999987631 0 122345566778999888743
No 339
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.57 Score=40.55 Aligned_cols=105 Identities=16% Similarity=0.206 Sum_probs=60.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHH-H---HHHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLS-I---ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~-~---~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
++.++||.| +|++|...++.+...|++ ++.+.+ ++.+.+ . +++.+... .+..+ .+..+..+.+.++... -
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 567899998 599999999999889995 444433 332222 2 22333221 11111 2223333444443332 2
Q ss_pred CCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075 250 SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 250 ~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~ 284 (361)
+++|++|.+.|.. . ..+.+.+.+..+|+++.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 4799999988742 0 123444566677899988743
No 340
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=95.20 E-value=0.13 Score=46.81 Aligned_cols=96 Identities=22% Similarity=0.232 Sum_probs=61.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-CC---EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-AD---ETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.+|.+||=+|||. |..+..+++ .|+ .|+++|.+++..+.+++.. .. .-+.+.. .+.. ++.. ....|
T Consensus 130 ~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~--~dae----~l~~-~~~~F 199 (322)
T PLN02396 130 FEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC--TTAE----KLAD-EGRKF 199 (322)
T ss_pred CCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe--cCHH----Hhhh-ccCCC
Confidence 5678898899876 666666665 577 6999999999888876531 11 0011111 1211 1111 23579
Q ss_pred cEEEEcc------CChHHHHHHHHhhcCCCEEEEEc
Q 018075 253 DVSFDCV------GFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 253 d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
|+|+..- .....++.+.+.|+|||.+++.-
T Consensus 200 D~Vi~~~vLeHv~d~~~~L~~l~r~LkPGG~liist 235 (322)
T PLN02396 200 DAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLST 235 (322)
T ss_pred CEEEEhhHHHhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 9998522 22246788889999999998763
No 341
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.20 E-value=0.65 Score=41.07 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
.+.+|+|+|+|++|..++..+...|...+..+|.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56899999999999999999999998788888755
No 342
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=95.20 E-value=0.29 Score=45.38 Aligned_cols=103 Identities=21% Similarity=0.289 Sum_probs=64.4
Q ss_pred HhcCCCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHH
Q 018075 172 RRANVGPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~--g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
...+.++|++||=+-+ |+--...+++....|. .|++.+.++.|.+.+ +.+|...+.....+...+... ..
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~---~~ 225 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAEL---LP 225 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccccccccc---cc
Confidence 4578899999999843 5544444444444455 579999999987655 558887644332221111111 10
Q ss_pred hhcCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEE
Q 018075 246 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCL 280 (361)
Q Consensus 246 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~ 280 (361)
.+..||.||= |+|.. ..+..+++.|++||+++.
T Consensus 226 --~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVY 286 (355)
T COG0144 226 --GGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVY 286 (355)
T ss_pred --ccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1224888865 66544 367778899999999874
No 343
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.19 Score=44.00 Aligned_cols=82 Identities=23% Similarity=0.302 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...++.+...|+ .|+.+++++++.+. +++.+... .+..+ .+..+....+.++... -+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-YG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence 468999998 59999999998888898 57888787765432 23333221 11111 1222333344433332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 344
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.19 E-value=0.26 Score=43.12 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
...+|+|+|+|++|..++..+...|...+..+|.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45799999999999999999999999888888643
No 345
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.17 E-value=0.18 Score=45.69 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=65.2
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
+...-....+++|+|+|..|.+.+..+. ..+.+.+.+.+++.++.+ ++++++...+ ... ..+..+.+
T Consensus 118 ~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~-~~~--~~~~~~av-------- 186 (304)
T PRK07340 118 RTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGP-TAE--PLDGEAIP-------- 186 (304)
T ss_pred HHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCC-eeE--ECCHHHHh--------
Confidence 4333356689999999999988888765 468778888888887654 5555542110 000 01222222
Q ss_pred CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
.++|+|+.|..+..-+-.. .++||-++..+|...
T Consensus 187 ~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~ 220 (304)
T PRK07340 187 EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFT 220 (304)
T ss_pred hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCC
Confidence 4799999988766322222 378999999999654
No 346
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.19 Score=43.99 Aligned_cols=82 Identities=18% Similarity=0.202 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...+..+...|+ .|+.+++++++.+.+ ++ .+... .+..+ .+..+..+.+.++.+. -.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence 467899998 58999999998888999 577777777665433 22 23221 11111 2223333344444332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 347
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.16 E-value=0.18 Score=44.00 Aligned_cols=83 Identities=20% Similarity=0.233 Sum_probs=48.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
.+.++||.| +|.+|...+..+...|++.++...++.++.+ +..+++... .+..+ .+..+..+.+.++.+..+.++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 356899998 6999999999888889954343444444433 333344221 11111 1223344444444433344599
Q ss_pred EEEEccC
Q 018075 254 VSFDCVG 260 (361)
Q Consensus 254 ~vld~~g 260 (361)
+++.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999875
No 348
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.15 E-value=0.24 Score=45.00 Aligned_cols=90 Identities=13% Similarity=0.155 Sum_probs=60.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+|.|+|.|.+|...++.++.+|+ .|++.+...++.. +..... ...++.+ +. ...|+|+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~l~e----~l----~~aDvvv~ 196 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREELSA----FL----SQTRVLIN 196 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----ccccHHH----HH----hcCCEEEE
Confidence 67899999999999999999999999 6777776543321 111111 0112222 21 46899999
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKTM-----STALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 285 (361)
+....... ...++.|+++..++-++...
T Consensus 197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 229 (312)
T PRK15469 197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARGV 229 (312)
T ss_pred CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence 88754333 34677899999888777554
No 349
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.15 E-value=0.077 Score=50.99 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=56.5
Q ss_pred cCCCCCCEEE----EEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhh
Q 018075 174 ANVGPETNVM----IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 174 ~~~~~g~~vl----I~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~ 247 (361)
.++++|+++| |+| +|++|.+++|+++..|++ |+++...+.+....+..+.+. +.+ .....+.+.+...
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~--- 102 (450)
T PRK08261 29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYD-VVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKAL--- 102 (450)
T ss_pred cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCe-eeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHH---
Confidence 5678999998 886 699999999999999994 666655444332222223332 222 1111222222111
Q ss_pred cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
-..++..++.|.++|+++.++...
T Consensus 103 --------------~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 --------------YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHHhccCCCEEEEEcccc
Confidence 025666778888899998887543
No 350
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=95.13 E-value=0.27 Score=44.66 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=61.8
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH---HHHHc-CCCEEeecCCCccchhHHHHHHHhh
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNL-GADETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
......+|++||-+|||. |..+..+++ .|+..|++++.++.-.. .++++ +...-+.+.. .+. .++..
T Consensus 115 ~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~--~~i----e~lp~- 185 (314)
T TIGR00452 115 PHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP--LGI----EQLHE- 185 (314)
T ss_pred HhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE--CCH----HHCCC-
Confidence 345667899999999987 777777765 47767999998885432 23332 2111111100 111 11211
Q ss_pred cCCCccEEEEcc-----CCh-HHHHHHHHhhcCCCEEEEE
Q 018075 248 MGSGIDVSFDCV-----GFD-KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 248 ~~~~~d~vld~~-----g~~-~~~~~~~~~l~~~G~~v~~ 281 (361)
...||+|+... ..+ ..+..+.+.|++||++++-
T Consensus 186 -~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle 224 (314)
T TIGR00452 186 -LYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE 224 (314)
T ss_pred -CCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 24699998642 122 5788899999999999874
No 351
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=95.11 E-value=0.061 Score=47.16 Aligned_cols=97 Identities=22% Similarity=0.244 Sum_probs=62.1
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAF---GAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
+.++.+||-+|||. |..+..+++.. ++ .+++++.+++-.+.+++. +...-+.+.. .+.. ++ .
T Consensus 54 ~~~~~~vLDlGcGt-G~~~~~l~~~~~~~~~-~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~--~d~~----~~---~ 122 (247)
T PRK15451 54 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE--GDIR----DI---A 122 (247)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHhcCCCCC-eEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEe--CChh----hC---C
Confidence 56889999999876 66777777742 45 799999999877776553 2221111111 1211 11 1
Q ss_pred CCCccEEEEccC-----C---hHHHHHHHHhhcCCCEEEEEcc
Q 018075 249 GSGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 249 ~~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
...+|+++.+.. . ...++.+.+.|+|||.++....
T Consensus 123 ~~~~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~ 165 (247)
T PRK15451 123 IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 165 (247)
T ss_pred CCCCCEEehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 235788775321 1 2468889999999999998763
No 352
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.11 E-value=0.39 Score=42.71 Aligned_cols=104 Identities=14% Similarity=0.189 Sum_probs=62.8
Q ss_pred HHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecCCCccchhHHHHHHH
Q 018075 169 HACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 169 ~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~ 245 (361)
.+++. ....++.+++|+|+|++|.+++..+...|. .+..++++.++.+ ++++++... .... ...+ .
T Consensus 106 ~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~~----~- 174 (270)
T TIGR00507 106 SDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMDE----L- 174 (270)
T ss_pred HHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chhh----h-
Confidence 34444 333557899999999999999988888898 6777778776643 444443211 1110 1110 1
Q ss_pred hhcCCCccEEEEccCChHHHH------HHHHhhcCCCEEEEEccCCC
Q 018075 246 NAMGSGIDVSFDCVGFDKTMS------TALNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~------~~~~~l~~~G~~v~~g~~~~ 286 (361)
....+|+|++|++.. ... -....++++..++.+.....
T Consensus 175 --~~~~~DivInatp~g-m~~~~~~~~~~~~~l~~~~~v~D~~y~p~ 218 (270)
T TIGR00507 175 --PLHRVDLIINATSAG-MSGNIDEPPVPAEKLKEGMVVYDMVYNPG 218 (270)
T ss_pred --cccCccEEEECCCCC-CCCCCCCCCCCHHHcCCCCEEEEeccCCC
Confidence 124699999998853 111 11345777777776655443
No 353
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=95.11 E-value=0.066 Score=40.68 Aligned_cols=95 Identities=23% Similarity=0.329 Sum_probs=58.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
|.+||-.|+|. |..++.+++.. ...+++++.++...+.++.. +.. .+... . .+..+....+ ...++|
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~-~--~D~~~~~~~~---~~~~~D 72 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVI-V--GDARDLPEPL---PDGKFD 72 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEE-E--SHHHHHHHTC---TTT-EE
T ss_pred CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEE-E--Cchhhchhhc---cCceeE
Confidence 56788887654 55666666655 45899999999988877662 221 11111 1 2333332112 357899
Q ss_pred EEEEccCCh--------------HHHHHHHHhhcCCCEEEEE
Q 018075 254 VSFDCVGFD--------------KTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 254 ~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~ 281 (361)
+|+-+..-. ..++.+.+.|+++|.++.+
T Consensus 73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~ 114 (117)
T PF13659_consen 73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI 114 (117)
T ss_dssp EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 998743211 3477889999999999875
No 354
>COG2521 Predicted archaeal methyltransferase [General function prediction only]
Probab=95.11 E-value=0.1 Score=44.40 Aligned_cols=111 Identities=17% Similarity=0.154 Sum_probs=72.9
Q ss_pred chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc------C--CCEEeecCCC
Q 018075 162 EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL------G--ADETAKVSTD 233 (361)
Q Consensus 162 ~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l------g--~~~~~~~~~~ 233 (361)
.|+.-|..=+...+++.|++||=. |+++|+.||.-++ .||..|+.+..++.-+++++-- - +-.++.
T Consensus 118 dP~~Dt~~Kv~~V~~~~G~rVLDt-C~GLGYtAi~a~~-rGA~~VitvEkdp~VLeLa~lNPwSr~l~~~~i~iil---- 191 (287)
T COG2521 118 DPLEDTLAKVELVKVKRGERVLDT-CTGLGYTAIEALE-RGAIHVITVEKDPNVLELAKLNPWSRELFEIAIKIIL---- 191 (287)
T ss_pred CcHHHHHhhhheeccccCCEeeee-ccCccHHHHHHHH-cCCcEEEEEeeCCCeEEeeccCCCCccccccccEEec----
Confidence 345555444555667889998864 6777999988766 6886899998887766655321 1 111221
Q ss_pred ccchhHHHHHHHhhcCCCccEEEEcc------C---ChHHHHHHHHhhcCCCEEEEEc
Q 018075 234 IEDVDTDVGKIQNAMGSGIDVSFDCV------G---FDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~vld~~------g---~~~~~~~~~~~l~~~G~~v~~g 282 (361)
+|..+.++.+. ...||++|.-- | +.+...++.+.|+|||++..+-
T Consensus 192 -GD~~e~V~~~~---D~sfDaIiHDPPRfS~AgeLYseefY~El~RiLkrgGrlFHYv 245 (287)
T COG2521 192 -GDAYEVVKDFD---DESFDAIIHDPPRFSLAGELYSEEFYRELYRILKRGGRLFHYV 245 (287)
T ss_pred -ccHHHHHhcCC---ccccceEeeCCCccchhhhHhHHHHHHHHHHHcCcCCcEEEEe
Confidence 45556665553 56799998632 1 1246778999999999998763
No 355
>PRK06196 oxidoreductase; Provisional
Probab=95.09 E-value=0.19 Score=45.72 Aligned_cols=82 Identities=20% Similarity=0.279 Sum_probs=50.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCEEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
.+.++||.| +|++|.+++..+...|+ .|+.++++.++.+. ++++..-..+..+ .+..+..+.+.++.. ...++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence 467899998 59999999998888999 57777777765543 3333211122111 222333333443332 1357999
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
++++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 356
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.07 E-value=0.32 Score=42.29 Aligned_cols=82 Identities=17% Similarity=0.198 Sum_probs=50.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (361)
+|.++||.| +|++|.+.+..+...|+ .|+.++++.. ..+.+++.+.. ..+..+ .+..+....+.++... ..++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence 578999998 58999999998888999 5777766542 22333444432 112211 2223344444443322 2479
Q ss_pred cEEEEccCC
Q 018075 253 DVSFDCVGF 261 (361)
Q Consensus 253 d~vld~~g~ 261 (361)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998864
No 357
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.07 E-value=0.12 Score=45.94 Aligned_cols=76 Identities=18% Similarity=0.149 Sum_probs=53.0
Q ss_pred HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHh
Q 018075 168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
+.+++..++..+.+++|+|+|+.+.+++.-++..|+..+..+.++.++.+.+ +.++... ... +
T Consensus 111 ~~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~-----------~~~---~-- 174 (272)
T PRK12550 111 AKLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW-----------RPD---L-- 174 (272)
T ss_pred HHHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc-----------hhh---c--
Confidence 4455544455567999999999999999999999998888888888776544 4443211 000 1
Q ss_pred hcCCCccEEEEccC
Q 018075 247 AMGSGIDVSFDCVG 260 (361)
Q Consensus 247 ~~~~~~d~vld~~g 260 (361)
....+|+|++|+.
T Consensus 175 -~~~~~dlvINaTp 187 (272)
T PRK12550 175 -GGIEADILVNVTP 187 (272)
T ss_pred -ccccCCEEEECCc
Confidence 1245899999876
No 358
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=95.07 E-value=0.63 Score=39.84 Aligned_cols=47 Identities=21% Similarity=0.229 Sum_probs=39.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh----------hHHHHHHHcC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV----------QRLSIARNLG 223 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~----------~~~~~~~~lg 223 (361)
-.|.+|+|+|.|.+|..+++++...|+..|.+.|.+. +..+..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 4689999999999999999999999996677778877 7777666654
No 359
>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional
Probab=95.05 E-value=0.16 Score=44.05 Aligned_cols=98 Identities=20% Similarity=0.197 Sum_probs=61.9
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
....++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++. +... .+.. .+..+... ..+
T Consensus 44 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~--~~~~--~~~~~~~~----~~~ 112 (233)
T PRK05134 44 AGGLFGKRVLDVGCGG-GILSESMARL-GA-DVTGIDASEENIEVARLHALESGLKI--DYRQ--TTAEELAA----EHP 112 (233)
T ss_pred ccCCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEcCCHHHHHHHHHHHHHcCCce--EEEe--cCHHHhhh----hcC
Confidence 3456788999999875 6677777774 66 689999998877666542 2211 1111 12222211 124
Q ss_pred CCccEEEE-----ccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075 250 SGIDVSFD-----CVGFD-KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 250 ~~~d~vld-----~~g~~-~~~~~~~~~l~~~G~~v~~g 282 (361)
.++|+|+- ..... ..+..+.+.|+++|+++...
T Consensus 113 ~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~ 151 (233)
T PRK05134 113 GQFDVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST 151 (233)
T ss_pred CCccEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence 68999965 23322 35688889999999988654
No 360
>PRK06484 short chain dehydrogenase; Validated
Probab=95.03 E-value=0.45 Score=46.62 Aligned_cols=82 Identities=23% Similarity=0.385 Sum_probs=54.2
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE---EeecCCCccchhHHHHHHHhhcCCC
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
.++.++||.| ++++|.+.++.+...|+ .|+.++++.++.+ +.++++... ..++ .+..+....+.++.+. ..+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~ 79 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDV-SDEAQIREGFEQLHRE-FGR 79 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecc-CCHHHHHHHHHHHHHH-hCC
Confidence 3578899998 58999999999888999 6777777777654 445565332 1222 2233444444444332 247
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++++.|.
T Consensus 80 iD~li~nag~ 89 (520)
T PRK06484 80 IDVLVNNAGV 89 (520)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 361
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.00 E-value=0.53 Score=43.71 Aligned_cols=83 Identities=16% Similarity=0.126 Sum_probs=48.5
Q ss_pred CCCCEEEEEC-CCHHHHH--HHHHHHHcCCCEEEEEeCCh---h-------------HHHHHHHcCCCE-EeecC-CCcc
Q 018075 177 GPETNVMIMG-SGPIGLV--TLLAARAFGAPRIIITDVDV---Q-------------RLSIARNLGADE-TAKVS-TDIE 235 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~--ai~la~~~g~~~vv~v~~~~---~-------------~~~~~~~lg~~~-~~~~~-~~~~ 235 (361)
.-+.++||.| ++++|.+ .++.+ ..|++ +++++... + -.+.+++.|... .+..+ .+.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 3457889998 5899999 45555 78994 56665322 1 123455666432 22222 2233
Q ss_pred chhHHHHHHHhhcCCCccEEEEccCCh
Q 018075 236 DVDTDVGKIQNAMGSGIDVSFDCVGFD 262 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~d~vld~~g~~ 262 (361)
...+.+.++.+.. +++|+++++.+.+
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 4444455554322 4799999988766
No 362
>PRK07904 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.25 Score=43.37 Aligned_cols=83 Identities=19% Similarity=0.328 Sum_probs=49.0
Q ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcC-CCEEEEEeCChhH-HH-HHHH---cCCC--EEeecC-CCccchhHHHHHHH
Q 018075 176 VGPETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQR-LS-IARN---LGAD--ETAKVS-TDIEDVDTDVGKIQ 245 (361)
Q Consensus 176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g-~~~vv~v~~~~~~-~~-~~~~---lg~~--~~~~~~-~~~~~~~~~~~~~~ 245 (361)
+..+.++||.| +|++|.+.++-+...| + .|+.+++++++ .+ .+++ .+.. ..+..+ .+..+..+.++++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 45678999998 5999999998766664 7 56777776654 22 3333 3321 122222 22233333444443
Q ss_pred hhcCCCccEEEEccCC
Q 018075 246 NAMGSGIDVSFDCVGF 261 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~ 261 (361)
. .+++|+++.+.|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 3 2579999987764
No 363
>PRK05867 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.27 Score=42.98 Aligned_cols=82 Identities=21% Similarity=0.289 Sum_probs=51.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ +++ +... .+..+ .+..+..+.+.++.+. -+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE-LG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 478899998 59999999998888999 577777777654433 222 3211 11111 2223344444444332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 364
>PRK07985 oxidoreductase; Provisional
Probab=94.93 E-value=0.53 Score=42.39 Aligned_cols=105 Identities=15% Similarity=0.140 Sum_probs=60.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC--hhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~--~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~ 248 (361)
++.++||.| +|++|.+.++.+...|++ |+.+.++ .++.+.+ ++.+... .+..+ .+..+..+.+.++...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA- 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 567899998 599999999988889994 6665433 2222222 2333221 11111 2223344444444332
Q ss_pred CCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075 249 GSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 249 ~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
-+++|+++.+.|.. ..++.+.+.+..+|+++.++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 34799999987631 1233444556678999988643
No 365
>PRK08264 short chain dehydrogenase; Validated
Probab=94.91 E-value=0.15 Score=44.07 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=47.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.+.++||.| +|.+|...++.+...|.+.|+.+.++.++.+. .+.. ..+..+- .+.. .+.++.+. -..+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~--~~~~-~~~~~~~~-~~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDV--TDPA-SVAAAAEA-ASDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecC--CCHH-HHHHHHHh-cCCCCEE
Confidence 467899998 69999999998888998557777777665432 3221 1111111 1211 12222221 2468999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 999886
No 366
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.91 E-value=0.23 Score=45.28 Aligned_cols=80 Identities=21% Similarity=0.330 Sum_probs=49.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC---C-EE--eecCCCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA---D-ET--AKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~-~~--~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
.+.++||.| +|++|...++.+...|+ .|+.++++.++.+ .+++++. . .. .++ .+..+....+.++.+ ..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~-~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL-GDLDSVRRFVDDFRA-LG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecC-CCHHHHHHHHHHHHH-hC
Confidence 467899998 59999999998888898 5777777776654 3333421 1 11 122 222233333333322 23
Q ss_pred CCccEEEEccC
Q 018075 250 SGIDVSFDCVG 260 (361)
Q Consensus 250 ~~~d~vld~~g 260 (361)
.++|+++++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 46999999887
No 367
>PRK06198 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.31 Score=42.71 Aligned_cols=84 Identities=19% Similarity=0.264 Sum_probs=51.0
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH----HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcC
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
-++.+++|.| +|++|...++.+...|++.|+.++++.++.+ .+++.+.... +..+ .+..+..+.+..+... -
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA-F 82 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence 3568899998 5899999999998899965788877765443 2233343221 1111 1222233333333221 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|++|++.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 469999999874
No 368
>PRK07062 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.28 Score=43.23 Aligned_cols=81 Identities=26% Similarity=0.303 Sum_probs=50.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCCEE----eecCCCccchhHHHHHHHhh
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADET----AKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~----~~~~~~~~~~~~~~~~~~~~ 247 (361)
.|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++ +...+ .+. .+..+..+.+.++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDV-LDEADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecC-CCHHHHHHHHHHHHHh
Confidence 478899998 58999999999888999 577787877654432 222 11121 122 2223333344444322
Q ss_pred cCCCccEEEEccCC
Q 018075 248 MGSGIDVSFDCVGF 261 (361)
Q Consensus 248 ~~~~~d~vld~~g~ 261 (361)
-+++|+++++.|.
T Consensus 85 -~g~id~li~~Ag~ 97 (265)
T PRK07062 85 -FGGVDMLVNNAGQ 97 (265)
T ss_pred -cCCCCEEEECCCC
Confidence 2469999999874
No 369
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.88 E-value=0.3 Score=42.44 Aligned_cols=82 Identities=20% Similarity=0.220 Sum_probs=50.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC--CC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG--AD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
++.++||.| +|.+|...++.+...|. .|+.++++.++.+.+ ..+. .. ..+..+ .+..++...+.+.... ..+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 467899998 59999999998888899 488888887665433 3332 11 111111 2223333333333222 247
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|++|.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 370
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.87 E-value=0.58 Score=40.84 Aligned_cols=84 Identities=21% Similarity=0.277 Sum_probs=47.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhc--
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAM-- 248 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~-- 248 (361)
.+.+++|.| +|.+|...++.+...|++.++...++.++.+ .++++ +... .+..+ .+..+....+.++....
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 357899998 6999999999888889843333455555432 32332 2211 12111 22233333344433211
Q ss_pred ---CCCccEEEEccCC
Q 018075 249 ---GSGIDVSFDCVGF 261 (361)
Q Consensus 249 ---~~~~d~vld~~g~ 261 (361)
..++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 2469999998864
No 371
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.86 E-value=0.26 Score=44.03 Aligned_cols=85 Identities=14% Similarity=0.182 Sum_probs=58.1
Q ss_pred HHHHhcC-CCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075 169 HACRRAN-VGPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 169 ~~l~~~~-~~~g~~vlI~G~g~-~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
..++..+ --+|.+++|+|+|. +|...+.++...|+ .|..+.+..+ + +.+.
T Consensus 148 ~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~----L~~~-- 199 (283)
T PRK14192 148 RLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------N----LPEL-- 199 (283)
T ss_pred HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------h----HHHH--
Confidence 3455543 35899999999876 99999999999999 5666643111 1 1111
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
-..+|++++++|.+..+. .+.++++..++.++...
T Consensus 200 --~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 200 --VKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred --hccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 146899999998764322 35688988888887553
No 372
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.86 E-value=0.19 Score=45.15 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=31.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
.++.+++|.|+|++|.+++..+...|++.|+.+.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578899999999999999888889997788887774
No 373
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.19 Score=43.98 Aligned_cols=78 Identities=22% Similarity=0.201 Sum_probs=48.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
.+.++||.| +|++|...++.+...|+ .|+.++++.++ +..+.. ..+..+ .+..+..+.+.++.+. ..++|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 578999998 59999999998888999 57777776654 112211 111111 2223334444443332 246999
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
No 374
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.27 Score=42.97 Aligned_cols=82 Identities=17% Similarity=0.271 Sum_probs=50.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. .+++ +.. ..+..+ .+..+....+.++.+.. .
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 457899998 69999999998888999 67888877665432 2222 321 112111 12223333344433322 3
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 69999998873
No 375
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional
Probab=94.85 E-value=0.18 Score=46.05 Aligned_cols=97 Identities=20% Similarity=0.218 Sum_probs=60.7
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH---HHHH-cCCC-EEeecCCCccchhHHHHHHHhhc
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARN-LGAD-ETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~-lg~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
....+|.+||-+|||. |..+..+++. |+..|+++|.+..-.. ..++ .+.. .+ .+.. .++ ..+..
T Consensus 118 l~~l~g~~VLDIGCG~-G~~~~~la~~-g~~~V~GiD~S~~~l~q~~a~~~~~~~~~~i-~~~~--~d~----e~lp~-- 186 (322)
T PRK15068 118 LSPLKGRTVLDVGCGN-GYHMWRMLGA-GAKLVVGIDPSQLFLCQFEAVRKLLGNDQRA-HLLP--LGI----EQLPA-- 186 (322)
T ss_pred hCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHhcCCCCCe-EEEe--CCH----HHCCC--
Confidence 4446789999999987 8888888876 6657999998875332 2222 1211 11 1111 111 11211
Q ss_pred CCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEE
Q 018075 249 GSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 249 ~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
...||+|+... .-...+..+.+.|+|||++++-
T Consensus 187 ~~~FD~V~s~~vl~H~~dp~~~L~~l~~~LkpGG~lvl~ 225 (322)
T PRK15068 187 LKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLE 225 (322)
T ss_pred cCCcCEEEECChhhccCCHHHHHHHHHHhcCCCcEEEEE
Confidence 35799998742 1125788899999999999864
No 376
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.85 E-value=0.24 Score=42.60 Aligned_cols=74 Identities=18% Similarity=0.292 Sum_probs=46.9
Q ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
+++|.| +|++|.+.++.+...|+ .|+.+++++++.+. .++++...+ .++ .+..+..+..+++ ..++|++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~----~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDN-TDPASLEEARGLF----PHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCC-CCHHHHHHHHHHH----hhcCcEEEE
Confidence 588998 59999999998888899 57777787776553 344554322 222 2222333333322 236899999
Q ss_pred ccC
Q 018075 258 CVG 260 (361)
Q Consensus 258 ~~g 260 (361)
+.|
T Consensus 76 ~ag 78 (223)
T PRK05884 76 VPA 78 (223)
T ss_pred CCC
Confidence 865
No 377
>PLN02253 xanthoxin dehydrogenase
Probab=94.84 E-value=0.26 Score=43.83 Aligned_cols=81 Identities=20% Similarity=0.253 Sum_probs=49.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--C-EE--eecCCCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--D-ET--AKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|++|.+.++.+...|+ .|+.++++++..+ ..++++. . .. .+. .+..+..+.+..+.+. -+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~-~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDV-TVEDDVSRAVDFTVDK-FG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeec-CCHHHHHHHHHHHHHH-hC
Confidence 467899998 69999999998888899 5777777655433 3344432 1 11 122 2223333444443332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998864
No 378
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.84 E-value=0.73 Score=37.47 Aligned_cols=91 Identities=18% Similarity=0.260 Sum_probs=59.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 259 (361)
.+|-++|.|.+|...+.-+...|. .|.+-++++++.+.+.+.|+... .+..+.. ...|+||-++
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~--------~~~dvvi~~v 65 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAA--------EQADVVILCV 65 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHH--------HHBSEEEE-S
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHh--------hcccceEeec
Confidence 368889999999999998888999 68888999999888887774332 1222222 2468999998
Q ss_pred CChHHHHHH------HHhhcCCCEEEEEccCCC
Q 018075 260 GFDKTMSTA------LNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 260 g~~~~~~~~------~~~l~~~G~~v~~g~~~~ 286 (361)
..+...+.. ...+.++..++.++....
T Consensus 66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~p 98 (163)
T PF03446_consen 66 PDDDAVEAVLFGENILAGLRPGKIIIDMSTISP 98 (163)
T ss_dssp SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS--H
T ss_pred ccchhhhhhhhhhHHhhccccceEEEecCCcch
Confidence 876555554 344566677766655443
No 379
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.84 E-value=0.3 Score=43.03 Aligned_cols=81 Identities=16% Similarity=0.185 Sum_probs=48.8
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE--eecCCCccchhHHHHHHHhhc
Q 018075 178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET--AKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~ 248 (361)
.|..+||.|+ + ++|.+.++.+...|+ .|+.++++++..+.+ ++.+.... .|. .+..+....+.++.+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv-~~~~~v~~~~~~~~~~- 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDV-TNPKSISNLFDDIKEK- 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccC-CCHHHHHHHHHHHHHH-
Confidence 5678899985 4 799999888888899 566666654222222 33343322 232 2334444555544432
Q ss_pred CCCccEEEEccCC
Q 018075 249 GSGIDVSFDCVGF 261 (361)
Q Consensus 249 ~~~~d~vld~~g~ 261 (361)
-+++|+++++.|.
T Consensus 84 ~g~iDilVnnag~ 96 (260)
T PRK06603 84 WGSFDFLLHGMAF 96 (260)
T ss_pred cCCccEEEEcccc
Confidence 2469999998763
No 380
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.83 E-value=0.4 Score=42.73 Aligned_cols=86 Identities=15% Similarity=0.202 Sum_probs=59.4
Q ss_pred HHHHHhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075 168 VHACRRANV-GPETNVMIMGSG-PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245 (361)
Q Consensus 168 ~~~l~~~~~-~~g~~vlI~G~g-~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 245 (361)
+..++..++ -.|.+++|+|.| -+|..++.++...|+ .|..+.+.. .+ +.+.
T Consensus 146 ~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~~----l~~~- 198 (286)
T PRK14175 146 MEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------KD----MASY- 198 (286)
T ss_pred HHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hh----HHHH-
Confidence 344555443 479999999965 599999999999999 455554321 01 1111
Q ss_pred hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
-..+|+|+.++|.+..+.. +.++++..++.+|...
T Consensus 199 ---~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 199 ---LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred ---HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 1469999999998854444 4588888888888643
No 381
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.12 Score=45.73 Aligned_cols=79 Identities=24% Similarity=0.264 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.+.+++|.| +|++|...++.+...|+ .|+.++++.++.+... +... ..++ .+.+++.+.+.++... -+++|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDV-TDDASVQAAVDEVIAR-AGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEE
Confidence 356789998 59999999998888899 5788877765543221 2221 1222 2334445555544332 3469999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
|++.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999885
No 382
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.83 E-value=1.2 Score=38.11 Aligned_cols=91 Identities=12% Similarity=0.061 Sum_probs=53.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC--ChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
++.+|||+|+|.++.-=+..+...|++ |.++.. +++-.++++ .+.-..+ . ..+... . -.++++|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~-~~~i~~~---~--r~~~~~--d-----l~g~~LV 89 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKK-YGNLKLI---K--GNYDKE--F-----IKDKHLI 89 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHh-CCCEEEE---e--CCCChH--H-----hCCCcEE
Confidence 578999999999998888888889995 444432 222223322 2221111 1 122111 1 1479999
Q ss_pred EEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075 256 FDCVGFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 256 ld~~g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
|-+++.++.-+.+....+..+.++..-
T Consensus 90 iaATdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 90 VIATDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred EECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 999998744444445555556555543
No 383
>PRK14968 putative methyltransferase; Provisional
Probab=94.82 E-value=0.15 Score=42.31 Aligned_cols=43 Identities=23% Similarity=0.474 Sum_probs=33.1
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN 221 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~ 221 (361)
..+++++|..|+|. |..+..+++. +. .+++++.+++..+.+++
T Consensus 21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~ 63 (188)
T PRK14968 21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAKC 63 (188)
T ss_pred ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHHH
Confidence 47888999998765 6677777776 66 79999999887766543
No 384
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.6 Score=41.53 Aligned_cols=99 Identities=22% Similarity=0.336 Sum_probs=57.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
..++|.|+|++|.+.+..+. .|+ .|+.+++++++.+ ..+++ +... .+..+ .+.++..+.+.++.. -.++|
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~--~g~id 78 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT--LGPVT 78 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh--cCCCC
Confidence 46788898899999998775 788 6777777766543 22322 3221 12111 222334444443321 24799
Q ss_pred EEEEccCChH------------------HHHHHHHhhcCCCEEEEEc
Q 018075 254 VSFDCVGFDK------------------TMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 254 ~vld~~g~~~------------------~~~~~~~~l~~~G~~v~~g 282 (361)
+++++.|... .++...+.+..+|+++.++
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~is 125 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIA 125 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEE
Confidence 9999987431 1333444556667766654
No 385
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.37 Score=41.76 Aligned_cols=83 Identities=18% Similarity=0.240 Sum_probs=50.4
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
..+.++||.| +|.+|..++..+...|. .|+.+++++++.+.+ + +.+... .+..+ .+.++....+..+.+. -
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-F 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 3457899998 59999999998888999 688888877654333 2 222221 12211 1222333333333321 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++.+.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 469999999874
No 386
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=94.79 E-value=0.93 Score=38.67 Aligned_cols=110 Identities=17% Similarity=0.187 Sum_probs=71.5
Q ss_pred CCCCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEeCCh---hHHHHHHHcCCCEEeecCC-CccchhHHHHHHHhhc
Q 018075 176 VGPETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGADETAKVST-DIEDVDTDVGKIQNAM 248 (361)
Q Consensus 176 ~~~g~~vlI~G-~--g~~G~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~ 248 (361)
+-.|++.||+| + -+++...++.++..|++..+.-...+ .-.++++++|.+.++..+- ++++....-.++.+ .
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~-~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK-K 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH-h
Confidence 45789999998 5 58899999999999996444443322 1235777788766554432 23333333333332 2
Q ss_pred CCCccEEEEccCCh-----------------------------HHHHHHHHhhcCCCEEEEEccCCC
Q 018075 249 GSGIDVSFDCVGFD-----------------------------KTMSTALNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 249 ~~~~d~vld~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~~ 286 (361)
=+++|.++.+++.. +..+.+...|.+||.++.+...+.
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs 148 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS 148 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc
Confidence 35899998887654 244556677899999998865443
No 387
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.79 E-value=0.43 Score=41.30 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=30.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~ 213 (361)
..+|+|+|+|++|..++..+-..|...+..+|.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46899999999999999999899998888887543
No 388
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.79 E-value=0.28 Score=43.17 Aligned_cols=82 Identities=20% Similarity=0.266 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
++.++||.| +|.+|...++.+...|+ .|+.++++.+..+.++++ +... .+..+ .+..+....+.++... ..+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 467899998 69999999998888899 578887776544443332 3221 11111 1222333334333322 346
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 389
>PLN02780 ketoreductase/ oxidoreductase
Probab=94.76 E-value=0.26 Score=45.03 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=49.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCCE----EeecCCCccchhHHHHHHHhh
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE----TAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~----~~~~~~~~~~~~~~~~~~~~~ 247 (361)
.|.++||.| ++++|.+.+..+...|+ .|+.+++++++.+.+ +++ +... ..|... +..+.+.++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~---~~~~~~~~l~~~ 127 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG---DIDEGVKRIKET 127 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC---CcHHHHHHHHHH
Confidence 588999999 58999999887777899 577788888776533 222 1111 123221 222333333322
Q ss_pred -cCCCccEEEEccCC
Q 018075 248 -MGSGIDVSFDCVGF 261 (361)
Q Consensus 248 -~~~~~d~vld~~g~ 261 (361)
++..+|+++++.|.
T Consensus 128 ~~~~didilVnnAG~ 142 (320)
T PLN02780 128 IEGLDVGVLINNVGV 142 (320)
T ss_pred hcCCCccEEEEecCc
Confidence 23357799998763
No 390
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.28 Score=42.94 Aligned_cols=83 Identities=16% Similarity=0.141 Sum_probs=50.7
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
-++.++||.| +|++|...+..+...|+ .|+.+++++++.+.+ +++ +.. ..+..+ .+..+....+.++... -
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER-F 80 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH-c
Confidence 3568899998 59999999998888999 678887777654333 222 222 111111 2223333333333222 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 469999998864
No 391
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.76 E-value=1 Score=40.36 Aligned_cols=107 Identities=17% Similarity=0.139 Sum_probs=60.6
Q ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-HH----HHHHHcCCCE-EeecC-CCccchhHHHHHHHhh
Q 018075 176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RL----SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNA 247 (361)
Q Consensus 176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~----~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~ 247 (361)
.-++.++||.| +|.+|...+..+...|+ .|+.+.++.+ .. +.++..+... .+..+ .+.....+.+.++.+.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34578999998 59999999998888899 5666655432 11 1222223221 11111 1222333334443332
Q ss_pred cCCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075 248 MGSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 248 ~~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
-.++|++|.+.|.. ...+.+.+.+.+.|+++.++..
T Consensus 122 -~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~ 183 (290)
T PRK06701 122 -LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI 183 (290)
T ss_pred -cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 24799999987642 0122334455677899888753
No 392
>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional
Probab=94.75 E-value=0.25 Score=44.03 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=63.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcC---CCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFG---APRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g---~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.++++||-+|||. |..+..+++... ...++++|.+++..+.+++.... .... .+..+.. + ....+
T Consensus 84 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~--~d~~~lp-----~---~~~sf 152 (272)
T PRK11088 84 EKATALLDIGCGE-GYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCV--ASSHRLP-----F---ADQSL 152 (272)
T ss_pred CCCCeEEEECCcC-CHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEE--eecccCC-----C---cCCce
Confidence 4557788889876 777777776643 12589999999988887764321 1111 1101110 1 13569
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
|+|+.... +....++.+.|+|||+++.+..
T Consensus 153 D~I~~~~~-~~~~~e~~rvLkpgG~li~~~p 182 (272)
T PRK11088 153 DAIIRIYA-PCKAEELARVVKPGGIVITVTP 182 (272)
T ss_pred eEEEEecC-CCCHHHHHhhccCCCEEEEEeC
Confidence 99998665 4478899999999999998753
No 393
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.75 E-value=0.18 Score=48.63 Aligned_cols=77 Identities=21% Similarity=0.337 Sum_probs=52.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh---------------------hHHHHHHHcCCCEEeecCCCccc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV---------------------QRLSIARNLGADETAKVSTDIED 236 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~ 236 (361)
++++|+|+|+|+.|+.++..++..|.+ |+..+..+ ...+.++++|.+...+.... .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 678999999999999999999999994 66665543 24567778887654331110 11
Q ss_pred hhHHHHHHHhhcCCCccEEEEccCCh
Q 018075 237 VDTDVGKIQNAMGSGIDVSFDCVGFD 262 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~vld~~g~~ 262 (361)
. .+.++. .++|.||.++|..
T Consensus 218 ~--~~~~~~----~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL----EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH----hcCCEEEEEeCCC
Confidence 1 112221 3699999999875
No 394
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.73 E-value=0.3 Score=42.81 Aligned_cols=82 Identities=13% Similarity=0.183 Sum_probs=49.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (361)
+|.++||.| +|++|.+.++.+...|+ .|+.++.+.. ..+.+++.+... .+..+ .+.++....+.++... .+++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence 467899998 58999999998888999 5666655432 223333444221 11111 2233444445444432 2479
Q ss_pred cEEEEccCC
Q 018075 253 DVSFDCVGF 261 (361)
Q Consensus 253 d~vld~~g~ 261 (361)
|+++++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 395
>PRK05854 short chain dehydrogenase; Provisional
Probab=94.72 E-value=0.31 Score=44.32 Aligned_cols=81 Identities=16% Similarity=0.221 Sum_probs=49.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc-----CCC-EE--eecCCCccchhHHHHHHHhh
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL-----GAD-ET--AKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l-----g~~-~~--~~~~~~~~~~~~~~~~~~~~ 247 (361)
.|.+++|.| ++++|.+.+..+...|+ .|+.+.++.++.+ .++++ +.. .. .|+ .+..+..+...++..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl-~d~~sv~~~~~~~~~- 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDL-SSLASVAALGEQLRA- 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecC-CCHHHHHHHHHHHHH-
Confidence 468899998 58999999998888999 5777777766543 22222 111 11 122 222333333333332
Q ss_pred cCCCccEEEEccCC
Q 018075 248 MGSGIDVSFDCVGF 261 (361)
Q Consensus 248 ~~~~~d~vld~~g~ 261 (361)
...++|+++++.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 23579999998764
No 396
>PLN02928 oxidoreductase family protein
Probab=94.69 E-value=0.55 Score=43.41 Aligned_cols=98 Identities=20% Similarity=0.286 Sum_probs=60.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC-----CEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-----DETAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.|.++.|+|.|.+|..+++.++.+|+ .|++.+++..+.. ...++. ...........++. ++. ...
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~----ell----~~a 227 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGGHEDIY----EFA----GEA 227 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccCcccCHH----HHH----hhC
Confidence 57899999999999999999999999 6888877532211 111110 00000000011222 222 358
Q ss_pred cEEEEccCChHH-----HHHHHHhhcCCCEEEEEccCC
Q 018075 253 DVSFDCVGFDKT-----MSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 253 d~vld~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 285 (361)
|+|+.+...... -...+..|+++..+|-++...
T Consensus 228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~ 265 (347)
T PLN02928 228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGG 265 (347)
T ss_pred CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCcc
Confidence 999997764322 245778899999888776554
No 397
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.69 E-value=0.35 Score=42.66 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=48.5
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
++.++||.|+ +++|.+.++.+...|+ .|+.+.+.+...+.+++ ++....+..+ .+.++..+.+.++.+. -
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-W 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-h
Confidence 5778999983 5899999998888999 45555444332333333 3322222211 2333444445444432 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999998864
No 398
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.68 E-value=0.37 Score=41.30 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=60.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh------hHH-------------HHH----HHcCCC-EEeecCCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV------QRL-------------SIA----RNLGAD-ETAKVSTD 233 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~------~~~-------------~~~----~~lg~~-~~~~~~~~ 233 (361)
+..+|+|.|.|++|.+++..+...|...+..+|.++ .|+ +.+ ++.+.. .+..++.
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 568999999999999999999999988888776543 122 111 112211 1111000
Q ss_pred ccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHH-hhcCCCEEEEEccCC
Q 018075 234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN-ATRPGGKVCLIGLAK 285 (361)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~-~l~~~G~~v~~g~~~ 285 (361)
-=..+.+.++ ...++|+|+||..+-..--.++. +.+.+=.++..+..+
T Consensus 108 -f~t~en~~~~---~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 108 -FITEENLEDL---LSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred -hhCHhHHHHH---hcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 0011122222 35689999999986644444444 555555666665443
No 399
>PRK12829 short chain dehydrogenase; Provisional
Probab=94.68 E-value=0.29 Score=42.99 Aligned_cols=85 Identities=21% Similarity=0.240 Sum_probs=52.7
Q ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCC--EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD--ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~--~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.-++.++||.| +|.+|..+++.+...|. .|+.+.++.+..+.+.+ +.-. ..+..+ .+..+..+.+.++... -.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FG 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 35778999998 59999999999888999 57888777665544332 3221 112211 1222333333333322 24
Q ss_pred CccEEEEccCCh
Q 018075 251 GIDVSFDCVGFD 262 (361)
Q Consensus 251 ~~d~vld~~g~~ 262 (361)
++|+||.+.|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999988743
No 400
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.66 E-value=0.26 Score=43.81 Aligned_cols=85 Identities=22% Similarity=0.223 Sum_probs=52.3
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC--EE--eecC-CCccchhHHHHHHHh
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD--ET--AKVS-TDIEDVDTDVGKIQN 246 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~--~~--~~~~-~~~~~~~~~~~~~~~ 246 (361)
-.|..+||.| +.++|.+.+..+...|+ +|+.+.+++++.+...+ .+.. .+ +..+ .+..+..+.+....+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 3678889998 58999999999999999 67888787776543322 2221 11 1111 122233333333323
Q ss_pred hcCCCccEEEEccCCh
Q 018075 247 AMGSGIDVSFDCVGFD 262 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~ 262 (361)
...+++|+.+++.|..
T Consensus 85 ~~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGAL 100 (270)
T ss_pred HhCCCCCEEEEcCCcC
Confidence 2246899999988754
No 401
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.64 E-value=0.54 Score=38.46 Aligned_cols=88 Identities=14% Similarity=0.195 Sum_probs=56.0
Q ss_pred HHHHHHHh-cCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHH
Q 018075 166 VGVHACRR-ANVGPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 243 (361)
Q Consensus 166 ~a~~~l~~-~~~~~g~~vlI~G~g~-~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~ 243 (361)
.+...++. ..--.|.++||+|+|. +|..++..++..|+ .+..+.+..+ +..+.
T Consensus 30 a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------~l~~~--- 84 (168)
T cd01080 30 GILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------NLKEH--- 84 (168)
T ss_pred HHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------hHHHH---
Confidence 34444554 3346899999999986 59989999999999 5666654421 11111
Q ss_pred HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+ ..+|+||.+++.+..+.. +.+.++-.++.++.+.
T Consensus 85 l-----~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 85 T-----KQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred H-----hhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 1 468999999998742222 3466665555665443
No 402
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.63 E-value=0.84 Score=41.65 Aligned_cols=90 Identities=21% Similarity=0.291 Sum_probs=61.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.++.|+|.|.+|++.++.++..|. .|+.-+++.. .+..+++++.+. ++.+.+ ...|++.-
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell--------~~sDii~l 206 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELL--------AESDIISL 206 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHH--------HhCCEEEE
Confidence 48999999999999999999999999 6788877765 444455555442 122222 34677755
Q ss_pred -ccCChHH----HHHHHHhhcCCCEEEEEccCC
Q 018075 258 -CVGFDKT----MSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 -~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 285 (361)
|-.++++ -...+..|++++.+|-++...
T Consensus 207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~ 239 (324)
T COG1052 207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG 239 (324)
T ss_pred eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence 4444432 123667899999888776554
No 403
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.63 E-value=0.7 Score=40.64 Aligned_cols=105 Identities=14% Similarity=0.178 Sum_probs=60.0
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCC------hhHHHHHHHcCC-CEEeecC-CCccchhHHHHHHHh
Q 018075 178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVD------VQRLSIARNLGA-DETAKVS-TDIEDVDTDVGKIQN 246 (361)
Q Consensus 178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~------~~~~~~~~~lg~-~~~~~~~-~~~~~~~~~~~~~~~ 246 (361)
.|.++||.|+ +++|.+.+..+...|++ |+.+..+ ++..+.+.+.+. ...+..+ .+.++..+.+.++.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4688999984 59999999988889995 5544322 122222222221 1112111 223344444444433
Q ss_pred hcCCCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075 247 AMGSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~ 284 (361)
. -+++|+++++.|.. + ..+.+++.|..+|+++.++..
T Consensus 84 ~-~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~ 149 (258)
T PRK07370 84 K-WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL 149 (258)
T ss_pred H-cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 2 24799999988731 0 123455667778999887643
No 404
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.62 E-value=0.43 Score=47.67 Aligned_cols=94 Identities=15% Similarity=0.084 Sum_probs=68.1
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 259 (361)
++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +..+. +.+ .+.+-..+|.++-+.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~~---~~L---~~agi~~A~~vv~~~ 472 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQL---ELL---RAAGAEKAEAIVITC 472 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCCH---HHH---HhcCCccCCEEEEEe
Confidence 689999999999999999999999 5999999999999999988654332 22111 222 223456899999999
Q ss_pred CChHHHHH---HHHhhcCCCEEEEE
Q 018075 260 GFDKTMST---ALNATRPGGKVCLI 281 (361)
Q Consensus 260 g~~~~~~~---~~~~l~~~G~~v~~ 281 (361)
++++.-.. ..+.+.|..+++.-
T Consensus 473 ~d~~~n~~i~~~~r~~~p~~~IiaR 497 (601)
T PRK03659 473 NEPEDTMKIVELCQQHFPHLHILAR 497 (601)
T ss_pred CCHHHHHHHHHHHHHHCCCCeEEEE
Confidence 97643222 34566777777653
No 405
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.62 E-value=0.55 Score=40.58 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=29.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 211 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~ 211 (361)
..+|+|.|+|++|..++..+...|...+..+|.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 579999999999999999999999988888854
No 406
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=94.61 E-value=0.41 Score=41.86 Aligned_cols=82 Identities=21% Similarity=0.305 Sum_probs=50.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|.+|...++.+...|+ .|+.+++++++.+. .++ .|... .+..+ .+..+......++.. .-.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence 578999998 59999999998888899 57778777665432 222 23211 11111 222333333333332 235
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|++|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 407
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.3 Score=43.46 Aligned_cols=82 Identities=28% Similarity=0.356 Sum_probs=50.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|.+.+..+...|+ .|+.++++.++.+ .++++ +... .+..+ .+..+..+.+.++.+. -+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 69999999998888999 5777777765543 22232 3221 11111 2223333334333322 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 69999998873
No 408
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.60 E-value=0.35 Score=42.30 Aligned_cols=82 Identities=20% Similarity=0.326 Sum_probs=51.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-H---HHcCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-A---RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~---~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|.+|...+..+...|+ .|+.++++.++.+. + ++.+.. ..+..+ .+..+....+.++.... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-G 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-C
Confidence 578999998 59999999998878899 67888787665432 2 233321 112111 22333444444443322 4
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|.++.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 409
>PRK12743 oxidoreductase; Provisional
Probab=94.60 E-value=0.3 Score=42.82 Aligned_cols=81 Identities=20% Similarity=0.218 Sum_probs=47.5
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHH----HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS----IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~----~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
+.++||.| +|++|..+++.+...|++ |+.+ .++.++.+ .+++.+... .+..+ .+..+....+.++.+. -.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 46899998 589999999999889995 5544 44444332 223344322 22111 2223333444444332 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 410
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.60 E-value=0.43 Score=44.68 Aligned_cols=35 Identities=31% Similarity=0.439 Sum_probs=31.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
.+.+|+|+|+|++|..++..+...|...+..+|.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999889999876
No 411
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.57 E-value=0.44 Score=47.20 Aligned_cols=93 Identities=12% Similarity=0.135 Sum_probs=64.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 259 (361)
++++|.|+|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +.. + .+.+++ .+-..+|.++-+.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~--~-~~~L~~---a~i~~a~~viv~~ 489 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAA--N-EEIMQL---AHLDCARWLLLTI 489 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCC--C-HHHHHh---cCccccCEEEEEc
Confidence 788999999999999999999998 5899999999999999888655432 221 1 222322 2346899888777
Q ss_pred CChHH---HHHHHHhhcCCCEEEE
Q 018075 260 GFDKT---MSTALNATRPGGKVCL 280 (361)
Q Consensus 260 g~~~~---~~~~~~~l~~~G~~v~ 280 (361)
+++.. .-...+...+..+++.
T Consensus 490 ~~~~~~~~iv~~~~~~~~~~~iia 513 (558)
T PRK10669 490 PNGYEAGEIVASAREKRPDIEIIA 513 (558)
T ss_pred CChHHHHHHHHHHHHHCCCCeEEE
Confidence 65432 1123455556666554
No 412
>TIGR02072 BioC biotin biosynthesis protein BioC. This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.
Probab=94.56 E-value=0.48 Score=40.91 Aligned_cols=98 Identities=17% Similarity=0.295 Sum_probs=61.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
..+.+||-+|+|. |.....+++......+++++.+++..+.+++.....+.... .+... .. .....+|+|+
T Consensus 33 ~~~~~vLDlG~G~-G~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~---~d~~~----~~-~~~~~fD~vi 103 (240)
T TIGR02072 33 FIPASVLDIGCGT-GYLTRALLKRFPQAEFIALDISAGMLAQAKTKLSENVQFIC---GDAEK----LP-LEDSSFDLIV 103 (240)
T ss_pred CCCCeEEEECCCc-cHHHHHHHHhCCCCcEEEEeChHHHHHHHHHhcCCCCeEEe---cchhh----CC-CCCCceeEEE
Confidence 3457888889866 66677777765444689999998887777664322111111 11111 10 0135699998
Q ss_pred Ecc------CChHHHHHHHHhhcCCCEEEEEcc
Q 018075 257 DCV------GFDKTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 257 d~~------g~~~~~~~~~~~l~~~G~~v~~g~ 283 (361)
... .....+..+.+.|+++|.++....
T Consensus 104 ~~~~l~~~~~~~~~l~~~~~~L~~~G~l~~~~~ 136 (240)
T TIGR02072 104 SNLALQWCDDLSQALSELARVLKPGGLLAFSTF 136 (240)
T ss_pred EhhhhhhccCHHHHHHHHHHHcCCCcEEEEEeC
Confidence 753 223467888899999999987653
No 413
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.54 E-value=0.72 Score=41.99 Aligned_cols=101 Identities=17% Similarity=0.214 Sum_probs=62.2
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEEeCChhHHH-HHHHcCCC--EEeecCCCccchhHHHHHHHhh
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLA-ARAFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~l-a~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~ 247 (361)
+...-+...+++|+|+|..|...+.. +...+.+.|.+.+++.++.+ +++++... .+... .+..+.+
T Consensus 118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~----~~~~~av------ 187 (314)
T PRK06141 118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVV----TDLEAAV------ 187 (314)
T ss_pred HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEe----CCHHHHH------
Confidence 33333567899999999999988764 44467778888888887754 44444321 11111 1222221
Q ss_pred cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
.+.|+|+.+.++..-+ ---+.+++|-.+..+|...
T Consensus 188 --~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 188 --RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNFT 222 (314)
T ss_pred --hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCCC
Confidence 4799999988765210 1125688888777777543
No 414
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.53 E-value=0.46 Score=41.74 Aligned_cols=79 Identities=27% Similarity=0.307 Sum_probs=48.9
Q ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCEEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075 181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++ +....+..+ .+.++..+.+.++.+. -.++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence 689998 58999999998888999 577777877654322 222 311222222 2223344444444332 247999
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
++++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 415
>PRK12744 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.62 Score=40.82 Aligned_cols=83 Identities=18% Similarity=0.154 Sum_probs=45.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC---hhH-HHHHH---HcCCCE-EeecC-CCccchhHHHHHHHhh
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD---VQR-LSIAR---NLGADE-TAKVS-TDIEDVDTDVGKIQNA 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~---~~~-~~~~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~ 247 (361)
.+.++||.| +|++|.+.++.+...|++.++...+. .+. .+.++ ..+... .+..+ .+..+..+.+.++..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~- 85 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA- 85 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH-
Confidence 467899998 59999999998888899634333221 121 22222 233321 11111 122233333333322
Q ss_pred cCCCccEEEEccCC
Q 018075 248 MGSGIDVSFDCVGF 261 (361)
Q Consensus 248 ~~~~~d~vld~~g~ 261 (361)
...++|+++.+.|.
T Consensus 86 ~~~~id~li~~ag~ 99 (257)
T PRK12744 86 AFGRPDIAINTVGK 99 (257)
T ss_pred hhCCCCEEEECCcc
Confidence 12479999998885
No 416
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.14 Score=44.81 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=45.9
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCE-EeecCCCccchhHHHHHHHhhcCCCc
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
+.++||.| +|.+|..+++.+...|+ .|+++.++.++.+.+. ..+... .+. .+-.+.. .+... ...++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~D~~~~~-~~~~~---~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEK--LDLTDAI-DRAQA---AEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEE--eeCCCHH-HHHHH---hcCCC
Confidence 45799998 59999999999988998 5777777665543332 223221 111 1112222 22222 13489
Q ss_pred cEEEEccC
Q 018075 253 DVSFDCVG 260 (361)
Q Consensus 253 d~vld~~g 260 (361)
|++|.+.|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999887
No 417
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases. Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.
Probab=94.50 E-value=0.46 Score=40.56 Aligned_cols=105 Identities=15% Similarity=0.252 Sum_probs=66.4
Q ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhc
Q 018075 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~ 248 (361)
+.....++.+||-+|+|. |..+..+++..+. ..+++++.++...+.+++... ..+.... .+..+. . ..
T Consensus 33 ~~~~~~~~~~vldiG~G~-G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~---~d~~~~----~-~~ 103 (223)
T TIGR01934 33 KLIGVFKGQKVLDVACGT-GDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQ---ADAEAL----P-FE 103 (223)
T ss_pred HHhccCCCCeEEEeCCCC-ChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhccCCCceEEe---cchhcC----C-CC
Confidence 344456889999999876 7777777877763 369999999888777766432 1111101 111111 0 01
Q ss_pred CCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 249 GSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 249 ~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
...+|+|+...+ ....++.+.+.|++||+++.++...
T Consensus 104 ~~~~D~i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 146 (223)
T TIGR01934 104 DNSFDAVTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFSK 146 (223)
T ss_pred CCcEEEEEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 346999875432 1246788889999999999877543
No 418
>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase. In E. coli, this protein flanks the DNA repair protein MutY, also called micA.
Probab=94.50 E-value=0.8 Score=38.45 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=62.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
...++|-+|||. |..+..+++......+++++.+++..+.++ +.+...+.... .+..+...... ....+|
T Consensus 16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~---~d~~~~~~~~~--~~~~~d 89 (194)
T TIGR00091 16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHVLC---GDANELLDKFF--PDGSLS 89 (194)
T ss_pred CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEc---cCHHHHHHhhC--CCCcee
Confidence 345677789887 888889998875447999999998665543 33433322211 23322222111 123688
Q ss_pred EEEEccCC--------------hHHHHHHHHhhcCCCEEEEE
Q 018075 254 VSFDCVGF--------------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 254 ~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~ 281 (361)
.++-..+. +..++.+.+.|++||.+...
T Consensus 90 ~v~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~LkpgG~l~~~ 131 (194)
T TIGR00091 90 KVFLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKGGVIHFK 131 (194)
T ss_pred EEEEECCCcCCCCCccccccCCHHHHHHHHHHhCCCCEEEEE
Confidence 88765433 24688899999999999765
No 419
>PRK05717 oxidoreductase; Validated
Probab=94.49 E-value=0.47 Score=41.54 Aligned_cols=83 Identities=19% Similarity=0.242 Sum_probs=50.5
Q ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.+|.++||.| +|.+|..++..+...|+ .|+.++++.++. +..++++... .+..+ .+..+..+.+.++.+. -+++
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i 85 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ-FGRL 85 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence 3578899998 69999999998888898 577776665543 3344454321 11111 1222333333443322 2469
Q ss_pred cEEEEccCC
Q 018075 253 DVSFDCVGF 261 (361)
Q Consensus 253 d~vld~~g~ 261 (361)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 420
>PRK06194 hypothetical protein; Provisional
Probab=94.48 E-value=0.47 Score=42.33 Aligned_cols=82 Identities=20% Similarity=0.344 Sum_probs=49.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...+..+...|+ .|+.++++.++.+ ..+++ +... .+..+ .+..++.+.+..+.+. .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-FG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 357899998 69999999998888899 5777777765443 22322 3221 12111 1222333333333221 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 421
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.47 E-value=0.8 Score=41.93 Aligned_cols=94 Identities=21% Similarity=0.214 Sum_probs=60.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEeCChhHHH-HHHHc----CCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+...+++|+|+|..+.+.+..+. ..+.+.+....++.++.+ +++++ +.. +..+ .+..+.+ .
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~ 193 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S 193 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence 45578999999999987777665 578878888888887755 44444 322 1111 1222221 4
Q ss_pred CccEEEEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
+.|+|+.|.+... .--....++++-++..+|..
T Consensus 194 ~aDiVvtaT~s~~-p~i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 194 GADIIVTTTPSET-PILHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred cCCEEEEecCCCC-cEecHHHcCCCcEEEeeCCC
Confidence 7999999887642 11112457888888888854
No 422
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.46 E-value=1.1 Score=41.10 Aligned_cols=88 Identities=19% Similarity=0.162 Sum_probs=59.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+|.|+|.|.+|...++.++..|. .|++.+.+.+..... . .+. .++.+ + -...|+|+-
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~---~~l~e----l----l~~aDiVil 204 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYK---DSVKE----A----IKDADIISL 204 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hcc---CCHHH----H----HhcCCEEEE
Confidence 57789999999999999999999999 688888776542210 0 010 12222 2 146899998
Q ss_pred ccCChHH-----HHHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKT-----MSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+...... ....+..|+++..++-++...
T Consensus 205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~ 237 (330)
T PRK12480 205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA 237 (330)
T ss_pred eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence 8875532 234667889998887776554
No 423
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.44 E-value=0.73 Score=42.84 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=34.6
Q ss_pred HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075 169 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 214 (361)
Q Consensus 169 ~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~ 214 (361)
.+++..+. -+|.+|.|.|.|.+|+.+++.+...|+ +|++++-++.
T Consensus 196 ~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 196 EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 44455444 599999999999999999999998999 4666654443
No 424
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.43 E-value=0.35 Score=45.65 Aligned_cols=38 Identities=21% Similarity=0.417 Sum_probs=31.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL 216 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~ 216 (361)
+|.+++|.| +|++|.+.++.+...|+ .|+.+++++++.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l 215 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKI 215 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence 478999998 59999999998888899 677777776654
No 425
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=94.42 E-value=0.5 Score=40.64 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=62.5
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEee-------cC-----CCccchhHH
Q 018075 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAK-------VS-----TDIEDVDTD 240 (361)
Q Consensus 174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~-------~~-----~~~~~~~~~ 240 (361)
....++.+|||-|||- |.-++-||. .|. .|++++-++...+.+.+ .+....+. +. --..|+-+.
T Consensus 39 l~~~~~~rvLvPgCGk-g~D~~~LA~-~G~-~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l 115 (226)
T PRK13256 39 LNINDSSVCLIPMCGC-SIDMLFFLS-KGV-KVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNL 115 (226)
T ss_pred cCCCCCCeEEEeCCCC-hHHHHHHHh-CCC-cEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCC
Confidence 4455788999999987 777777766 688 59999999988776544 22211000 00 000121110
Q ss_pred HHHHHhhcCCCccEEEEccC----Ch----HHHHHHHHhhcCCCEEEEEcc
Q 018075 241 VGKIQNAMGSGIDVSFDCVG----FD----KTMSTALNATRPGGKVCLIGL 283 (361)
Q Consensus 241 ~~~~~~~~~~~~d~vld~~g----~~----~~~~~~~~~l~~~G~~v~~g~ 283 (361)
-. .......||.|+|..- .+ .-.+.+.+.|+|+|+++.+..
T Consensus 116 ~~--~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~ 164 (226)
T PRK13256 116 PK--IANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM 164 (226)
T ss_pred Cc--cccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 00 0001246999999432 12 245567788999999988764
No 426
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.41 E-value=0.66 Score=41.99 Aligned_cols=89 Identities=15% Similarity=0.155 Sum_probs=59.9
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.-.|.+|.|+|.|.+|.+.++.++..|.+ |++.++.....+.++..|+.. .+..+.+ ...|+|
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~~-ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaa--------k~ADVV 75 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGVE-VVVGVRPGKSFEVAKADGFEV--------MSVSEAV--------RTAQVV 75 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcCE-EEEEECcchhhHHHHHcCCEE--------CCHHHHH--------hcCCEE
Confidence 34789999999999999999999999995 555545455555666666532 1222222 468999
Q ss_pred EEccCChHH---H-HHHHHhhcCCCEEEEE
Q 018075 256 FDCVGFDKT---M-STALNATRPGGKVCLI 281 (361)
Q Consensus 256 ld~~g~~~~---~-~~~~~~l~~~G~~v~~ 281 (361)
+-++..+.. + ...+..|+++..++..
T Consensus 76 ~llLPd~~t~~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 76 QMLLPDEQQAHVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred EEeCCChHHHHHHHHHHHhcCCCCCEEEEC
Confidence 998876532 2 2356677887655443
No 427
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.39 E-value=0.49 Score=41.51 Aligned_cols=79 Identities=22% Similarity=0.316 Sum_probs=48.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCC-EEeecCCCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ +++ +.. ..+..+ ..+.. .+.++.+. -.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D--~~~~~-~~~~~~~~-~g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALD--LSSPE-AREQLAAE-AG 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEec--CCCHH-HHHHHHHH-hC
Confidence 478999998 58999999998888999 688887877655432 222 221 122111 11211 22222221 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 428
>PLN03013 cysteine synthase
Probab=94.39 E-value=2.1 Score=40.61 Aligned_cols=57 Identities=19% Similarity=0.336 Sum_probs=43.9
Q ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHHHcCCCEEe
Q 018075 172 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETA 228 (361)
Q Consensus 172 ~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~ 228 (361)
+.+.+++|.+.+|.. +|..|++.+..++.+|.+.++.+. .+++|.+.++.+|++.+.
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 446678896666655 799999999999999997655553 456788888999987654
No 429
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.38 E-value=0.32 Score=42.34 Aligned_cols=83 Identities=18% Similarity=0.213 Sum_probs=48.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HH---HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IA---RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|.+|...+..+...|+++++...++.++.+ .. +..+... .+..+ .+..+....+.++.... .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-G 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 467899998 5999999999888899954443455554432 22 2234321 11111 22233334444443322 4
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998873
No 430
>PRK08643 acetoin reductase; Validated
Probab=94.38 E-value=0.49 Score=41.39 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=49.2
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
+.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ .++ +... .+..+ .+.++..+.+.++.+. ..+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 56889998 59999999998888999 577787776654322 222 2221 11111 2222333344444322 247
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 431
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.36 E-value=0.41 Score=42.48 Aligned_cols=80 Identities=23% Similarity=0.177 Sum_probs=49.0
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCC-EEeecC-CCccchhHHHHHHHhhcCCCccEE
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.++||.| +|.+|...++.+...|. .|+.+.++.++.+.+++ .+.. ..+..+ .+..+..+.+.++.+ ...++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA-ALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence 4789998 69999999998888898 67778788776655443 2321 111111 122223333333322 13578999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 432
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.32 E-value=0.54 Score=41.21 Aligned_cols=82 Identities=21% Similarity=0.286 Sum_probs=50.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+. +.+... .+..+ .+..+..+.+.++.+. -.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 578999998 59999999998888999 6788878776654332 222221 12111 1222333333333322 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|.++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 433
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.32 E-value=0.12 Score=40.11 Aligned_cols=80 Identities=18% Similarity=0.181 Sum_probs=48.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe-CChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
.-+|-|+|+|-+|......++..|. .|..+. ++.++.+.+.. ++.....++ .+ + -...|++|
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~-------~~----~----~~~aDlv~ 73 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDL-------EE----I----LRDADLVF 73 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----T-------TG----G----GCC-SEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccc-------cc----c----cccCCEEE
Confidence 3578899999999999999999998 566664 44445554444 443332221 11 1 25699999
Q ss_pred EccCChHHHHHHHHhhcCC
Q 018075 257 DCVGFDKTMSTALNATRPG 275 (361)
Q Consensus 257 d~~g~~~~~~~~~~~l~~~ 275 (361)
-++..+ .+...+..|...
T Consensus 74 iavpDd-aI~~va~~La~~ 91 (127)
T PF10727_consen 74 IAVPDD-AIAEVAEQLAQY 91 (127)
T ss_dssp E-S-CC-HHHHHHHHHHCC
T ss_pred EEechH-HHHHHHHHHHHh
Confidence 999976 788888777654
No 434
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.31 E-value=0.5 Score=43.08 Aligned_cols=102 Identities=22% Similarity=0.251 Sum_probs=60.3
Q ss_pred EEEEECCCHHHHHHHHHHHHcC----CCEEEEEeC--ChhHHHHHHHcCCCE------------EeecCCCccchh--HH
Q 018075 181 NVMIMGSGPIGLVTLLAARAFG----APRIIITDV--DVQRLSIARNLGADE------------TAKVSTDIEDVD--TD 240 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~g----~~~vv~v~~--~~~~~~~~~~lg~~~------------~~~~~~~~~~~~--~~ 240 (361)
+|.|.|.|.+|..+.+.+...+ + .++++.- +.+...++.++...+ .+.+....-.+. +.
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999877653 5 4555532 223333443333110 000000000000 01
Q ss_pred HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075 241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
..++.. ...++|+||+|+|...+.+.+..++..|++.|.++.+
T Consensus 80 p~~~~w-~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPW-RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccc-cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 111111 2368999999999887888888999999999998855
No 435
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.30 E-value=0.26 Score=49.65 Aligned_cols=77 Identities=23% Similarity=0.301 Sum_probs=52.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh---------------------HHHHHHHcCCCEEeecCCCccc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIED 236 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~ 236 (361)
.+++|+|+|+|+.|+.++..++..|.+ |+..+..+. ..++++++|++...+..-. .+
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIG-RD 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccC-Cc
Confidence 489999999999999999999999994 666765542 4567777887654332110 11
Q ss_pred hhHHHHHHHhhcCCCccEEEEccCCh
Q 018075 237 VDTDVGKIQNAMGSGIDVSFDCVGFD 262 (361)
Q Consensus 237 ~~~~~~~~~~~~~~~~d~vld~~g~~ 262 (361)
. .+.++ ..++|.||.++|..
T Consensus 387 ~--~~~~l----~~~~DaV~latGa~ 406 (639)
T PRK12809 387 I--TFSDL----TSEYDAVFIGVGTY 406 (639)
T ss_pred C--CHHHH----HhcCCEEEEeCCCC
Confidence 1 12222 24699999999864
No 436
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.51 Score=41.06 Aligned_cols=82 Identities=22% Similarity=0.296 Sum_probs=49.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc--CCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
++.++||.| +|.+|...++.+...|+ .|+.+.++.++.+ ..+++ +.. ..+..+ .+..+..+.+.++.+. -++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 467899998 59999999997777898 5777777765443 23333 221 122111 1222333333333322 257
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 437
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.30 E-value=0.6 Score=40.91 Aligned_cols=82 Identities=18% Similarity=0.332 Sum_probs=49.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HH---HHcCCCEE-eecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IA---RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|.+|...+..+...|+ .|+.+++++++.+ .+ ++.+.... +..+ .+..+..+.+.++... -.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER-FG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 478999998 59999999998888999 5777777775443 22 33343321 1111 1222233333333221 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 438
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.54 Score=41.67 Aligned_cols=81 Identities=19% Similarity=0.275 Sum_probs=48.8
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcC-----CC-EEeecC-CCccchhHHHHHHHhhc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLG-----AD-ETAKVS-TDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg-----~~-~~~~~~-~~~~~~~~~~~~~~~~~ 248 (361)
++.++||.| +|.+|...++.+...|+ .|+.++++.++.+ ..+++. .. ..+..+ .+..+..+.+.+..+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW- 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 468999999 59999999998888999 5777877765543 222221 11 111111 1222333333333221
Q ss_pred CCCccEEEEccC
Q 018075 249 GSGIDVSFDCVG 260 (361)
Q Consensus 249 ~~~~d~vld~~g 260 (361)
..++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 247899999887
No 439
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.28 E-value=0.35 Score=48.42 Aligned_cols=94 Identities=15% Similarity=0.175 Sum_probs=66.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258 (361)
Q Consensus 179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 258 (361)
.++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +..+. +.+ .+.+-..+|.++-+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~~---~~L---~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DATRM---DLL---ESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eCCCH---HHH---HhcCCCcCCEEEEE
Confidence 3689999999999999999999999 5899999999999999988654322 22211 122 22245689999999
Q ss_pred cCChHHHH---HHHHhhcCCCEEEE
Q 018075 259 VGFDKTMS---TALNATRPGGKVCL 280 (361)
Q Consensus 259 ~g~~~~~~---~~~~~l~~~G~~v~ 280 (361)
.++++.-. ...+.+.|+-+++.
T Consensus 472 ~~d~~~n~~i~~~ar~~~p~~~iia 496 (621)
T PRK03562 472 IDDPQTSLQLVELVKEHFPHLQIIA 496 (621)
T ss_pred eCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 98764322 23455566666544
No 440
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.27 E-value=0.42 Score=41.49 Aligned_cols=82 Identities=20% Similarity=0.229 Sum_probs=47.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHH---cCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARN---LGADET---AKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~---lg~~~~---~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
++..+||.| +|++|...++.+...|++.++...++.. +.+.+++ .+.... .+. .+..+..+.+.++.+. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNV-GDWDSTKAAFDKVKAE-V 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-h
Confidence 357889998 6999999999988899954333433332 2233332 343322 122 2223333444444332 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 579999999875
No 441
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.5 Score=41.34 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=48.6
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC--EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
+.++||.| +|.+|...+..+...|+ .|+.++++.++.+ +.+++... ..+..+ .+.++....+.++... -+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE-RGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence 46899998 58999999988878898 5777878776654 33333211 111111 1222233333333222 24699
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 442
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.23 E-value=0.61 Score=43.48 Aligned_cols=35 Identities=23% Similarity=0.460 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
.+.+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999999888888765
No 443
>PRK08223 hypothetical protein; Validated
Probab=94.23 E-value=0.59 Score=41.65 Aligned_cols=35 Identities=31% Similarity=0.525 Sum_probs=31.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
...+|||.|+|++|..+++.+.+.|...+..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46899999999999999999999999888888754
No 444
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=94.23 E-value=0.33 Score=40.87 Aligned_cols=99 Identities=22% Similarity=0.224 Sum_probs=69.7
Q ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075 170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
.+.+..+.+-.+|.=+|||+ |...-.|++......+.+++++++-.+.+++...+.-.. ..+.. .. ...
T Consensus 22 Lla~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~----~aDl~----~w--~p~ 90 (257)
T COG4106 22 LLARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFE----EADLR----TW--KPE 90 (257)
T ss_pred HHhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCcee----cccHh----hc--CCC
Confidence 33344556778888889998 999999999997668999999999988887766543221 12221 11 124
Q ss_pred CCccEEEEccC------ChHHHHHHHHhhcCCCEEE
Q 018075 250 SGIDVSFDCVG------FDKTMSTALNATRPGGKVC 279 (361)
Q Consensus 250 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v 279 (361)
...|++|.+.. .+..+.+++..|+|||.+-
T Consensus 91 ~~~dllfaNAvlqWlpdH~~ll~rL~~~L~Pgg~LA 126 (257)
T COG4106 91 QPTDLLFANAVLQWLPDHPELLPRLVSQLAPGGVLA 126 (257)
T ss_pred CccchhhhhhhhhhccccHHHHHHHHHhhCCCceEE
Confidence 56788876542 2358899999999999764
No 445
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.22 E-value=0.6 Score=40.83 Aligned_cols=81 Identities=20% Similarity=0.231 Sum_probs=50.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCCE-E--eecCCCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
+|.++||.| ++++|.+.++.+...|+ .|+.+.++.. ..+.+++.+.+. . .+. .+.++..+.+.++.+. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADL-IQQKDIDSIVSQAVEV-MGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCC-CCHHHHHHHHHHHHHH-cCC
Confidence 578899998 58999999998888999 5666655432 223334445322 1 222 2333444444444332 246
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 446
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.21 E-value=0.61 Score=39.29 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
...+|+|.|+|++|...++.+-..|...+..+|.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 45789999999999999999999999888888754
No 447
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.21 E-value=0.48 Score=41.00 Aligned_cols=82 Identities=23% Similarity=0.306 Sum_probs=50.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++.++||.| +|.+|...+..+...|. .|+..+++.++.+. ...++... .+..+ .+..+..+.+.++.+. -.++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 467899998 59999999998888898 66666666655543 33344221 11111 1223333333333321 24799
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
.++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 448
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.20 E-value=0.53 Score=41.61 Aligned_cols=81 Identities=14% Similarity=0.177 Sum_probs=48.0
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
+|.++||.|++ ++|.+.++.+...|+ .|+.+++++...+.++++ +....+..+ .+..+....+.++.+. -
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-W 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-c
Confidence 46789999853 899999988888999 566666653222333332 221122111 2333454555444332 2
Q ss_pred CCccEEEEccC
Q 018075 250 SGIDVSFDCVG 260 (361)
Q Consensus 250 ~~~d~vld~~g 260 (361)
+++|+++++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 46999999987
No 449
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=94.20 E-value=0.62 Score=42.47 Aligned_cols=87 Identities=16% Similarity=0.098 Sum_probs=55.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
-++.+|.|+|.|.+|.+.++-++..|.+.++.........+.+++.|... .+..+. -...|+|+
T Consensus 15 L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~--------~s~~ea--------a~~ADVVv 78 (330)
T PRK05479 15 IKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEV--------LTVAEA--------AKWADVIM 78 (330)
T ss_pred hCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCee--------CCHHHH--------HhcCCEEE
Confidence 45789999999999999999999999954444444344556666667532 122222 14689999
Q ss_pred EccCChHH---H-HHHHHhhcCCCEEE
Q 018075 257 DCVGFDKT---M-STALNATRPGGKVC 279 (361)
Q Consensus 257 d~~g~~~~---~-~~~~~~l~~~G~~v 279 (361)
-++..... + +.+...++++..++
T Consensus 79 LaVPd~~~~~V~~~~I~~~Lk~g~iL~ 105 (330)
T PRK05479 79 ILLPDEVQAEVYEEEIEPNLKEGAALA 105 (330)
T ss_pred EcCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 99985522 1 22334556665553
No 450
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.20 E-value=0.56 Score=41.64 Aligned_cols=81 Identities=19% Similarity=0.283 Sum_probs=49.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.+++|.| +|++|.+.+..+...|+ .|+.++++.++.+ +.+++ +.. ..+..+ .+..+....+.++... -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 468899998 59999999998888999 5777777765443 23332 322 111111 1122333333333221 24
Q ss_pred CccEEEEccC
Q 018075 251 GIDVSFDCVG 260 (361)
Q Consensus 251 ~~d~vld~~g 260 (361)
++|+++.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 451
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.19 E-value=0.58 Score=41.02 Aligned_cols=82 Identities=21% Similarity=0.203 Sum_probs=49.0
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH---HHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
.+.++||.| +|++|.+.++.+...|+ .++.+.++++..+ ...+.+.. ..+..+ .+..+....+.++... .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence 578999998 59999999998888999 5666666532222 22333422 112211 2223333444444332 247
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 452
>PLN00203 glutamyl-tRNA reductase
Probab=94.16 E-value=0.64 Score=45.27 Aligned_cols=75 Identities=15% Similarity=0.292 Sum_probs=51.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
.+.+|+|+|+|.+|.+++..+...|+..++++.++.++.+. +.+++...+. + ..+.+. .+. -.+.|+||
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~----~~~~dl-~~a----l~~aDVVI 334 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-Y----KPLDEM-LAC----AAEADVVF 334 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-e----ecHhhH-HHH----HhcCCEEE
Confidence 37899999999999999999999998778888888877654 4455421111 1 011111 111 24799999
Q ss_pred EccCCh
Q 018075 257 DCVGFD 262 (361)
Q Consensus 257 d~~g~~ 262 (361)
.|++.+
T Consensus 335 sAT~s~ 340 (519)
T PLN00203 335 TSTSSE 340 (519)
T ss_pred EccCCC
Confidence 998655
No 453
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.14 E-value=0.66 Score=40.52 Aligned_cols=82 Identities=27% Similarity=0.469 Sum_probs=50.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|++|.+.++.+...|+ .++.++++.++.+ ..+++ +.. ..+..+ .+..+..+.+.++.+. -.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence 467899998 59999999998888899 6777777765543 22322 221 112221 1223333334333322 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 454
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.08 E-value=0.5 Score=41.42 Aligned_cols=82 Identities=23% Similarity=0.354 Sum_probs=51.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d 253 (361)
.+.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ ++++... .+..+ .+..+....+.++.+. -.++|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 467899998 59999999998888999 677887877765433 3344221 11111 2223334444433322 24799
Q ss_pred EEEEccCC
Q 018075 254 VSFDCVGF 261 (361)
Q Consensus 254 ~vld~~g~ 261 (361)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
No 455
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.07 E-value=0.5 Score=41.95 Aligned_cols=81 Identities=23% Similarity=0.220 Sum_probs=49.4
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCC-EEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
+.++||.| +|.+|...++.+...|. .|+.++++.++.+.+.+ ++.. ..+..+ .+..+....+.++... -.++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH-FGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 45789998 69999999998877898 57788787766554433 3321 111111 1222333333333221 247899
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
++.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 456
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.07 E-value=1 Score=35.54 Aligned_cols=85 Identities=19% Similarity=0.195 Sum_probs=58.9
Q ss_pred HHHHhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075 169 HACRRANV-GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246 (361)
Q Consensus 169 ~~l~~~~~-~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 246 (361)
..++..++ -+|.+++|+| +..+|.-++.++...|+ .|..+.+... +..+.+
T Consensus 17 ~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------~l~~~v----- 69 (140)
T cd05212 17 ELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------QLQSKV----- 69 (140)
T ss_pred HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------CHHHHH-----
Confidence 34455444 4799999999 78999999999999999 5666654321 111111
Q ss_pred hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+..|+|+.++|.+..+. -+.+++|..++.+|...
T Consensus 70 ---~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 70 ---HDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred ---hhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 46899999988774333 45689999888877554
No 457
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.06 E-value=0.66 Score=40.31 Aligned_cols=81 Identities=23% Similarity=0.333 Sum_probs=49.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecCC-CccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVST-DIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| +|.+|...+..+...|+ .|+.++++.++.+.+ ++.+... .+..+- +..+..+.+..+.+. -.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 468899998 59999999998888899 577777776654332 2223221 222211 222333333333321 24
Q ss_pred CccEEEEccC
Q 018075 251 GIDVSFDCVG 260 (361)
Q Consensus 251 ~~d~vld~~g 260 (361)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 7899999987
No 458
>PRK09242 tropinone reductase; Provisional
Probab=94.05 E-value=0.7 Score=40.46 Aligned_cols=81 Identities=25% Similarity=0.312 Sum_probs=50.6
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc-----CCCE-E--eecCCCccchhHHHHHHHhh
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GADE-T--AKVSTDIEDVDTDVGKIQNA 247 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-~--~~~~~~~~~~~~~~~~~~~~ 247 (361)
.+.++||.| +|++|...+..+...|+ .|+.++++.++.+.+ +++ +.+. . .++ .+..+....+.++...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADV-SDDEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCC-CCHHHHHHHHHHHHHH
Confidence 478999998 59999999999888999 577777777654432 222 2111 1 122 1223333344443332
Q ss_pred cCCCccEEEEccCC
Q 018075 248 MGSGIDVSFDCVGF 261 (361)
Q Consensus 248 ~~~~~d~vld~~g~ 261 (361)
-.++|+++.+.|.
T Consensus 86 -~g~id~li~~ag~ 98 (257)
T PRK09242 86 -WDGLHILVNNAGG 98 (257)
T ss_pred -cCCCCEEEECCCC
Confidence 2479999999985
No 459
>PRK07411 hypothetical protein; Validated
Probab=94.01 E-value=0.6 Score=43.89 Aligned_cols=35 Identities=37% Similarity=0.494 Sum_probs=31.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
...+|||+|+|++|..+++.+...|...+..+|.+
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35799999999999999999999999888888754
No 460
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.01 E-value=0.46 Score=41.44 Aligned_cols=78 Identities=21% Similarity=0.293 Sum_probs=49.1
Q ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCE-Ee--ecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TA--KVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
+++|.| +|++|.+.+..+...|+ .|+.+++++++.+.+.. ++... .+ +. .+..+..+.+.++.+. .+++|++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~i~~~~~~~~~~-~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDV-RNRAAIEEMLASLPAE-WRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence 688998 59999999998888999 57888888776654433 44321 11 22 2222333333333321 2479999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998764
No 461
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.01 E-value=0.36 Score=43.94 Aligned_cols=94 Identities=12% Similarity=0.194 Sum_probs=56.6
Q ss_pred EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075 181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259 (361)
Q Consensus 181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 259 (361)
+|||.| +|-+|...+..+...|. .|.+++++.++...+...+...+. .+ -.+.. .+.+. -.++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~D--l~d~~-~l~~a----l~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GD--LSLPE-TLPPS----FKGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CC--CCCHH-HHHHH----HCCCCEEEECC
Confidence 689998 59999999998888898 577777776665554445554322 11 11221 12222 14689999986
Q ss_pred CChH------------HHHHHHHhhcCCC--EEEEEcc
Q 018075 260 GFDK------------TMSTALNATRPGG--KVCLIGL 283 (361)
Q Consensus 260 g~~~------------~~~~~~~~l~~~G--~~v~~g~ 283 (361)
+... ....+++.+...| +++.++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 5321 1123444444333 7887765
No 462
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.99 E-value=0.69 Score=39.93 Aligned_cols=81 Identities=22% Similarity=0.285 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~ 249 (361)
++.++||.| +|.+|...++.+...|.+ |+.+.+++++.+.. ++.+.... .+. .+..++.+.+.++... -
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDV-SDEAAVRALIEAAVEA-F 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence 457899998 599999999988888994 78888877654332 22333221 122 1223344444443321 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
.++|.++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 468999998864
No 463
>PRK06914 short chain dehydrogenase; Provisional
Probab=93.98 E-value=0.49 Score=42.03 Aligned_cols=80 Identities=19% Similarity=0.269 Sum_probs=47.9
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCC--C-EEeecC-CCccchhHHHHHHHhhcC
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA--D-ETAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
+.++||.| +|.+|...+..+...|+ .|++++++.++.+.+.+ .+. . ..+..+ .+.++... +.++... -
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence 56789998 59999999998888899 57777777665443322 221 1 111111 12223333 3333321 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999998864
No 464
>KOG1661 consensus Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=93.98 E-value=0.15 Score=42.59 Aligned_cols=111 Identities=16% Similarity=0.196 Sum_probs=69.4
Q ss_pred hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEE--EEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075 164 LSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRI--IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241 (361)
Q Consensus 164 ~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~v--v~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 241 (361)
.++++..|.. .++||.+.|=+|+|. |++...++++.|..-. ++++.-++-.+..++ +.+..+..++ . ...+
T Consensus 69 ha~~le~L~~-~L~pG~s~LdvGsGS-GYLt~~~~~mvg~~g~~~~GIEh~~eLVe~Sk~-nl~k~i~~~e---~-~~~~ 141 (237)
T KOG1661|consen 69 HATALEYLDD-HLQPGASFLDVGSGS-GYLTACFARMVGATGGNVHGIEHIPELVEYSKK-NLDKDITTSE---S-SSKL 141 (237)
T ss_pred HHHHHHHHHH-hhccCcceeecCCCc-cHHHHHHHHHhcCCCccccchhhhHHHHHHHHH-HHHhhccCch---h-hhhh
Confidence 4455555543 379999999998866 8999999988887544 666665554444433 1111010000 0 0000
Q ss_pred HH-----------HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075 242 GK-----------IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 242 ~~-----------~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
+. .-.....++|.+.--.+.+...+.+++.|.++|+++..
T Consensus 142 ~~~~l~ivvGDgr~g~~e~a~YDaIhvGAaa~~~pq~l~dqL~~gGrllip 192 (237)
T KOG1661|consen 142 KRGELSIVVGDGRKGYAEQAPYDAIHVGAAASELPQELLDQLKPGGRLLIP 192 (237)
T ss_pred ccCceEEEeCCccccCCccCCcceEEEccCccccHHHHHHhhccCCeEEEe
Confidence 00 00112457999998888788999999999999999875
No 465
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.97 E-value=0.26 Score=49.82 Aligned_cols=78 Identities=22% Similarity=0.325 Sum_probs=50.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh---------------------HHHHHHHcCCCEEeecCCCcc
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIE 235 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~ 235 (361)
..+.+|+|+|+|+.|++++..++..|. .|++++..+. ..+.++++|.+...+..-. .
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~ 402 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVG-K 402 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeC-C
Confidence 358899999999999999999999999 4777765432 3455667776543221000 1
Q ss_pred chhHHHHHHHhhcCCCccEEEEccCCh
Q 018075 236 DVDTDVGKIQNAMGSGIDVSFDCVGFD 262 (361)
Q Consensus 236 ~~~~~~~~~~~~~~~~~d~vld~~g~~ 262 (361)
+. .+.++ ..++|.||.++|..
T Consensus 403 ~i--~~~~~----~~~~DavilAtGa~ 423 (654)
T PRK12769 403 DI--SLESL----LEDYDAVFVGVGTY 423 (654)
T ss_pred cC--CHHHH----HhcCCEEEEeCCCC
Confidence 11 11122 13699999988853
No 466
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=93.97 E-value=0.98 Score=41.09 Aligned_cols=90 Identities=18% Similarity=0.139 Sum_probs=64.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
..|++|.|+|.|.+|+..++-++..| +.+....+...+.+.+.+.++.. .++.+.+ ...|+++
T Consensus 160 ~~gK~vgilG~G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~~--------~~sD~iv 222 (336)
T KOG0069|consen 160 LEGKTVGILGLGRIGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEF--------VDIEELL--------ANSDVIV 222 (336)
T ss_pred ccCCEEEEecCcHHHHHHHHhhhhcc-ceeeeecccCCchhhHHHhcccc--------cCHHHHH--------hhCCEEE
Confidence 46899999999999999999999999 57888878777777777777652 2333332 3466665
Q ss_pred E-ccCChHHHHH-----HHHhhcCCCEEEEEccC
Q 018075 257 D-CVGFDKTMST-----ALNATRPGGKVCLIGLA 284 (361)
Q Consensus 257 d-~~g~~~~~~~-----~~~~l~~~G~~v~~g~~ 284 (361)
- |..++ .... .+..|++++.+|-++..
T Consensus 223 v~~pLt~-~T~~liNk~~~~~mk~g~vlVN~aRG 255 (336)
T KOG0069|consen 223 VNCPLTK-ETRHLINKKFIEKMKDGAVLVNTARG 255 (336)
T ss_pred EecCCCH-HHHHHhhHHHHHhcCCCeEEEecccc
Confidence 4 54444 4444 55688999988766543
No 467
>PRK12367 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.53 Score=41.15 Aligned_cols=75 Identities=23% Similarity=0.192 Sum_probs=44.5
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v 255 (361)
.+.++||.| +|++|.+.++.+...|+ .|+.+++++ +..+... .+....+..+- .+..+ +.+. -.++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~--~~~~~-~~~~----~~~iDil 83 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC--GKEES-LDKQ----LASLDVL 83 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC--CCHHH-HHHh----cCCCCEE
Confidence 367899998 58999999998888999 577776665 2222211 11112222111 12221 2221 2469999
Q ss_pred EEccCC
Q 018075 256 FDCVGF 261 (361)
Q Consensus 256 ld~~g~ 261 (361)
+++.|.
T Consensus 84 VnnAG~ 89 (245)
T PRK12367 84 ILNHGI 89 (245)
T ss_pred EECCcc
Confidence 999875
No 468
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=93.96 E-value=0.75 Score=40.75 Aligned_cols=89 Identities=19% Similarity=0.245 Sum_probs=54.6
Q ss_pred EEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075 181 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~ 259 (361)
+|.|+|+|.+|...++..... +.+.+.++..........+.++.. +..+ .++. ++ ...+|+|++|.
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~----~d~~----~l----~~~~DvVve~t 69 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVV----SSVD----AL----PQRPDLVVECA 69 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-Ceee----CCHH----Hh----ccCCCEEEECC
Confidence 688999999999888866655 454333333322222222223221 1111 1221 12 24699999999
Q ss_pred CChHHHHHHHHhhcCCCEEEEEc
Q 018075 260 GFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 260 g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
+...+.+.....|..|-.++...
T Consensus 70 ~~~~~~e~~~~aL~aGk~Vvi~s 92 (265)
T PRK13303 70 GHAALKEHVVPILKAGIDCAVIS 92 (265)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeC
Confidence 98878888889998887777643
No 469
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=93.96 E-value=0.47 Score=41.20 Aligned_cols=95 Identities=24% Similarity=0.343 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHcCCCEEEEEeCChhH-----HHHHHHcCCCEEeecCC-CccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075 188 GPIGLVTLLAARAFGAPRIIITDVDVQR-----LSIARNLGADETAKVST-DIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261 (361)
Q Consensus 188 g~~G~~ai~la~~~g~~~vv~v~~~~~~-----~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~ 261 (361)
+++|.+.++-+...|+ .|+.++++.++ .++.++.+.. ++..+- +.++....+.++.+..++++|+++++.+.
T Consensus 6 ~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 7999999999999999 68888888876 2445556654 444332 33445555555554444789999986543
Q ss_pred h-----------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075 262 D-----------------------------KTMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 262 ~-----------------------------~~~~~~~~~l~~~G~~v~~g~~ 284 (361)
. ...+.+.+.++++|.++.++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~ 135 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSI 135 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEG
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccch
Confidence 2 1344455677888999988643
No 470
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.95 E-value=1.3 Score=34.41 Aligned_cols=94 Identities=16% Similarity=0.230 Sum_probs=56.6
Q ss_pred EEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCChh---HHHHHHHcCCCEEeecCCCccchhHHHHHHH----------
Q 018075 182 VMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGKIQ---------- 245 (361)
Q Consensus 182 vlI~G-~g~~G~~ai~la~~~g--~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~---------- 245 (361)
|.|+| +|++|..+..+++... + .|++...... =.+.+++|.+..+...+. ...+.+++..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 57889 5999999999999987 6 4666644332 235667788888766432 1112222111
Q ss_pred -------hhc-CCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 018075 246 -------NAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 279 (361)
Q Consensus 246 -------~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v 279 (361)
+.. ..++|+|+.++.+-..+.-.+..+..|=++.
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia 118 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA 118 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence 111 2568888887766667777777777665554
No 471
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.93 E-value=0.29 Score=43.77 Aligned_cols=43 Identities=21% Similarity=0.370 Sum_probs=36.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH
Q 018075 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 219 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~ 219 (361)
.++.++||+|+|+.+.+++.-+...|+..+..++++.+|.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 4578999999999999999988889998888898888776544
No 472
>PRK07063 short chain dehydrogenase; Provisional
Probab=93.91 E-value=0.49 Score=41.55 Aligned_cols=82 Identities=23% Similarity=0.276 Sum_probs=50.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc-----CCC-EEeecC-CCccchhHHHHHHHhhc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL-----GAD-ETAKVS-TDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l-----g~~-~~~~~~-~~~~~~~~~~~~~~~~~ 248 (361)
.+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .+++ +.. ..+..+ .+..+....+.++.+.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~- 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA- 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 467899998 59999999998888999 57777777665443 2332 211 111111 2223344444444332
Q ss_pred CCCccEEEEccCC
Q 018075 249 GSGIDVSFDCVGF 261 (361)
Q Consensus 249 ~~~~d~vld~~g~ 261 (361)
-+++|+++++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999998874
No 473
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=93.89 E-value=1.5 Score=38.19 Aligned_cols=77 Identities=21% Similarity=0.236 Sum_probs=46.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV 254 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~ 254 (361)
++.++||.| +|.+|...+..+...|+ .|+.++++. ....+.. ..+..+ .+..++.+.+.++... ..++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 467899998 58999999998888899 577776654 1222221 111111 2223333444333321 246999
Q ss_pred EEEccCC
Q 018075 255 SFDCVGF 261 (361)
Q Consensus 255 vld~~g~ 261 (361)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
No 474
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.89 E-value=0.51 Score=41.11 Aligned_cols=80 Identities=20% Similarity=0.334 Sum_probs=49.0
Q ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (361)
.++||.| +|.+|...+..+...|. .|+.++++.++.+.+.+ .+... .+..+ .+.+++...+.++... ..++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCCC
Confidence 5789998 59999999998888899 68888887765544332 22221 11111 2223343444444332 2468
Q ss_pred cEEEEccCC
Q 018075 253 DVSFDCVGF 261 (361)
Q Consensus 253 d~vld~~g~ 261 (361)
|++|.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999987764
No 475
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=93.88 E-value=0.69 Score=40.50 Aligned_cols=81 Identities=12% Similarity=0.189 Sum_probs=48.3
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH----cCCCEE--eecC-CCccchhHHHHHHHhhcC
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGADET--AKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~~--~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
+.++||.| +|.+|.+.+..+...|+ .++.++++.++.+.+ ++ .+...+ +..+ ++..+....+.++... -
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 46899998 58999999998888898 677787776544322 22 221111 2111 1222333333333322 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
.++|+++++.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 479999998874
No 476
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=93.88 E-value=0.66 Score=41.44 Aligned_cols=87 Identities=20% Similarity=0.161 Sum_probs=56.3
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g 260 (361)
+|.|+|.|.+|...+..++..|. .|.+.++++++.+.+.+.|..... . .+. +. -...|+||-|+.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~--~~~-~~--------~~~aDlVilavp 66 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S--TDL-SL--------LKDCDLVILALP 66 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c--CCH-hH--------hcCCCEEEEcCC
Confidence 58899999999988888887887 688999999888888877742110 1 111 11 146889998888
Q ss_pred ChHH---HHHHHHhhcCCCEEEEEc
Q 018075 261 FDKT---MSTALNATRPGGKVCLIG 282 (361)
Q Consensus 261 ~~~~---~~~~~~~l~~~G~~v~~g 282 (361)
.... ++.+...++++..+..++
T Consensus 67 ~~~~~~~~~~l~~~l~~~~ii~d~~ 91 (279)
T PRK07417 67 IGLLLPPSEQLIPALPPEAIVTDVG 91 (279)
T ss_pred HHHHHHHHHHHHHhCCCCcEEEeCc
Confidence 5522 233334445554444443
No 477
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.85 E-value=0.85 Score=40.74 Aligned_cols=86 Identities=27% Similarity=0.382 Sum_probs=53.2
Q ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEee----cCCCccc---hhHHHHHHH
Q 018075 175 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAK----VSTDIED---VDTDVGKIQ 245 (361)
Q Consensus 175 ~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~----~~~~~~~---~~~~~~~~~ 245 (361)
+.++...++|.| +.++|.+.+..++..|+++ -.+.++.+++..+ ++++....+. ++.+..+ .+..+++++
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~V-ti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~ 107 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADV-TITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR 107 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCce-EEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence 345568899997 7899999999999999964 4444666665544 4455322111 1111122 233333332
Q ss_pred hhcCCCccEEEEccCCh
Q 018075 246 NAMGSGIDVSFDCVGFD 262 (361)
Q Consensus 246 ~~~~~~~d~vld~~g~~ 262 (361)
. ....+|.+|.|.|..
T Consensus 108 ~-~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 108 D-LEGPIDNLFCCAGVA 123 (331)
T ss_pred h-ccCCcceEEEecCcc
Confidence 2 235799999999865
No 478
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=93.83 E-value=0.97 Score=41.20 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=68.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH------cCC-----CEEeecCCCccchhHHHHHH
Q 018075 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN------LGA-----DETAKVSTDIEDVDTDVGKI 244 (361)
Q Consensus 176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~------lg~-----~~~~~~~~~~~~~~~~~~~~ 244 (361)
++.-++|||+|.|. |+++-++.|.=+...|.-++-+++-.+++++ ++. ..+...+ +|.-++++.
T Consensus 287 ~~~a~~vLvlGGGD-GLAlRellkyP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~dpRv~Vv~---dDAf~wlr~- 361 (508)
T COG4262 287 VRGARSVLVLGGGD-GLALRELLKYPQVEQITLVDLDPRMIELASHATVLRALNQGSFSDPRVTVVN---DDAFQWLRT- 361 (508)
T ss_pred ccccceEEEEcCCc-hHHHHHHHhCCCcceEEEEecCHHHHHHhhhhhHhhhhccCCccCCeeEEEe---ccHHHHHHh-
Confidence 45668999999887 9999999999888899999999987777662 221 1222222 233344433
Q ss_pred HhhcCCCccEEEEccCCh-----------HHHHHHHHhhcCCCEEEEEc
Q 018075 245 QNAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 245 ~~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g 282 (361)
.+.++|.||--...| +....+-+.|++.|.+|.-.
T Consensus 362 ---a~~~fD~vIVDl~DP~tps~~rlYS~eFY~ll~~~l~e~Gl~VvQa 407 (508)
T COG4262 362 ---AADMFDVVIVDLPDPSTPSIGRLYSVEFYRLLSRHLAETGLMVVQA 407 (508)
T ss_pred ---hcccccEEEEeCCCCCCcchhhhhhHHHHHHHHHhcCcCceEEEec
Confidence 356899997644433 24455678899999988654
No 479
>PRK06197 short chain dehydrogenase; Provisional
Probab=93.83 E-value=0.67 Score=41.92 Aligned_cols=82 Identities=21% Similarity=0.321 Sum_probs=48.9
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc-----CCC-EEeecC-CCccchhHHHHHHHhhc
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL-----GAD-ETAKVS-TDIEDVDTDVGKIQNAM 248 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l-----g~~-~~~~~~-~~~~~~~~~~~~~~~~~ 248 (361)
.+.++||.| +|++|.++++.+...|+ .|+.+.++.++.+. .+++ +.. ..+..+ .+.++..+.+.++...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~- 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA- 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence 578999998 59999999998888899 57777777665432 2222 111 111111 1222333333333321
Q ss_pred CCCccEEEEccCC
Q 018075 249 GSGIDVSFDCVGF 261 (361)
Q Consensus 249 ~~~~d~vld~~g~ 261 (361)
-.++|+++.+.|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 2479999998873
No 480
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.78 E-value=1.9 Score=37.39 Aligned_cols=107 Identities=14% Similarity=0.194 Sum_probs=60.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|.+|...++-+...|++.++....+.+.. ..+++.+... .+..+ .+..+....+.++... -.
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cC
Confidence 367899998 589999999988889995434343333222 2223333321 11111 1222333333333322 24
Q ss_pred CccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccCC
Q 018075 251 GIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 251 ~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
++|.+|.+.|.. + ..+.+.+.+...|+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 799999998731 1 1334455667778999887543
No 481
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.77 E-value=0.59 Score=40.40 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=49.1
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|.+|...+..+...|+ .|+.+++++++.+. .++ .+... .+..+ .+..+..+.++.+.. .-+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence 357899998 58999999998888899 67778787665432 222 23211 11111 122233333333322 124
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998864
No 482
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=93.77 E-value=1.9 Score=38.98 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=35.0
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA 224 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~ 224 (361)
+|.|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~ 44 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT 44 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 57889999999988887777888 57778999988887776653
No 483
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.76 E-value=1.9 Score=37.15 Aligned_cols=83 Identities=20% Similarity=0.267 Sum_probs=45.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHH---HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIAR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|.+|...+..+...|++.++...+.+++. +... ..+... .+..+ .+..++.+...++... -.
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 82 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-FG 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 456899998 599999999988888995434444333222 2222 223221 11111 1122233333333221 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|.++.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (248)
T PRK05557 83 GVDILVNNAGI 93 (248)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 484
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.76 E-value=0.76 Score=43.26 Aligned_cols=35 Identities=31% Similarity=0.501 Sum_probs=30.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~ 212 (361)
...+|||+|+|++|..++..+...|...+..+|.+
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 45789999999999999999999999888888744
No 485
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.75 E-value=1.1 Score=34.64 Aligned_cols=93 Identities=18% Similarity=0.170 Sum_probs=52.6
Q ss_pred EEEEECC-CHHHHHHHHHHHH-cCCCEEEEEeCChh---HHHHHHHcCCC--EEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 181 NVMIMGS-GPIGLVTLLAARA-FGAPRIIITDVDVQ---RLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 181 ~vlI~G~-g~~G~~ai~la~~-~g~~~vv~v~~~~~---~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
+|.|+|+ |-+|...++.+.. .+.+.+.+++++++ ..+..+-.|.. .+..+ .+ +.++ -..+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~----~~~~D 69 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEEL----LEEAD 69 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHH----TTH-S
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHh----cccCC
Confidence 6889997 9999999998888 67765666666651 11111212211 11111 12 2222 23399
Q ss_pred EEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT 286 (361)
Q Consensus 254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 286 (361)
++||++. ++.....++.+...|.-+.+|.++-
T Consensus 70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG~ 101 (124)
T PF01113_consen 70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTGF 101 (124)
T ss_dssp EEEEES--HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCCC
Confidence 9999985 5566666666666677777776553
No 486
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.75 E-value=0.77 Score=41.53 Aligned_cols=87 Identities=22% Similarity=0.226 Sum_probs=59.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.+|.|+|.|.+|...+++++.+|. .|++.+++... .+.... + .++. ++. ...|+|+.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~------~~~~~~--~----~~l~----ell----~~aDiv~~ 179 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN------DGISSI--Y----MEPE----DIM----KKSDFVLI 179 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc------cCcccc--c----CCHH----HHH----hhCCEEEE
Confidence 58999999999999999999999999 68888765321 122110 0 1222 221 35899998
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKTM-----STALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 285 (361)
+....... ...+..|+++..++-++...
T Consensus 180 ~lp~t~~T~~li~~~~l~~mk~ga~lIN~sRG~ 212 (303)
T PRK06436 180 SLPLTDETRGMINSKMLSLFRKGLAIINVARAD 212 (303)
T ss_pred CCCCCchhhcCcCHHHHhcCCCCeEEEECCCcc
Confidence 87754322 34678899998887776554
No 487
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=93.75 E-value=0.62 Score=40.16 Aligned_cols=74 Identities=18% Similarity=0.256 Sum_probs=53.5
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH--HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR--NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~ 258 (361)
+++|+|+|.+|...++.+...|. .|+.++.++++.+... ++....+.- +..+ .+. +.+.+-..+|+++-+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~g-d~t~---~~~---L~~agi~~aD~vva~ 73 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIG-DATD---EDV---LEEAGIDDADAVVAA 73 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEe-cCCC---HHH---HHhcCCCcCCEEEEe
Confidence 57899999999999999999999 5899999998876633 355544332 2221 223 333456789999999
Q ss_pred cCCh
Q 018075 259 VGFD 262 (361)
Q Consensus 259 ~g~~ 262 (361)
.|.+
T Consensus 74 t~~d 77 (225)
T COG0569 74 TGND 77 (225)
T ss_pred eCCC
Confidence 9975
No 488
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.74 E-value=0.88 Score=41.68 Aligned_cols=93 Identities=12% Similarity=0.097 Sum_probs=62.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEe----ecCC---CccchhHHHHHHHhhcCCCc
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA----KVST---DIEDVDTDVGKIQNAMGSGI 252 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~ 252 (361)
-+|.|+|+|.+|.+.+..+...|. .|...++++++.+.+.+.+..... .... ...+.. +. -...
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~----e~----~~~a 75 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPE----EA----LAGA 75 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHH----HH----HcCC
Confidence 478999999999999998888888 577788888777666654321100 0000 001111 11 1468
Q ss_pred cEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIG 282 (361)
Q Consensus 253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 282 (361)
|+||-++... ..+..++.++++-.++.+.
T Consensus 76 D~Vi~~v~~~-~~~~v~~~l~~~~~vi~~~ 104 (328)
T PRK14618 76 DFAVVAVPSK-ALRETLAGLPRALGYVSCA 104 (328)
T ss_pred CEEEEECchH-HHHHHHHhcCcCCEEEEEe
Confidence 9999999977 6788888888887766664
No 489
>PRK06181 short chain dehydrogenase; Provisional
Probab=93.70 E-value=0.9 Score=39.88 Aligned_cols=81 Identities=21% Similarity=0.319 Sum_probs=48.2
Q ss_pred CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075 179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG 251 (361)
Q Consensus 179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~ 251 (361)
+.++||.| +|.+|..+++.+...|. .|+.+++++++.+.+ + ..+... .+..+ .+.......+.++... -.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 35789998 59999999998888898 678887876554322 2 223221 11111 1222333333333221 246
Q ss_pred ccEEEEccCC
Q 018075 252 IDVSFDCVGF 261 (361)
Q Consensus 252 ~d~vld~~g~ 261 (361)
+|+++.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 9999999864
No 490
>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Probab=93.69 E-value=0.87 Score=32.73 Aligned_cols=91 Identities=23% Similarity=0.296 Sum_probs=55.1
Q ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH---c-CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN---L-GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~---l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
++-.|+|. |....++++ .....+++++.+++..+.+++ . +...+..+. .++.+... ....++|+++.
T Consensus 2 ildig~G~-G~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~d~i~~ 72 (107)
T cd02440 2 VLDLGCGT-GALALALAS-GPGARVTGVDISPVALELARKAAAALLADNVEVLK---GDAEELPP----EADESFDVIIS 72 (107)
T ss_pred eEEEcCCc-cHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhcccccceEEEE---cChhhhcc----ccCCceEEEEE
Confidence 55568765 667777777 444489999999887777662 1 111111111 12222211 12467999988
Q ss_pred ccCC-------hHHHHHHHHhhcCCCEEEEE
Q 018075 258 CVGF-------DKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 258 ~~g~-------~~~~~~~~~~l~~~G~~v~~ 281 (361)
.... ...+..+.+.++++|.++..
T Consensus 73 ~~~~~~~~~~~~~~l~~~~~~l~~~g~~~~~ 103 (107)
T cd02440 73 DPPLHHLVEDLARFLEEARRLLKPGGVLVLT 103 (107)
T ss_pred ccceeehhhHHHHHHHHHHHHcCCCCEEEEE
Confidence 5543 23567778889999998754
No 491
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=93.68 E-value=0.96 Score=40.22 Aligned_cols=88 Identities=18% Similarity=0.165 Sum_probs=57.8
Q ss_pred CEEEEECCCHHHHHHHHHHHH--cCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 180 TNVMIMGSGPIGLVTLLAARA--FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~--~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
-+|.|+|+|.+|...++.+.. .+.+.+...++++++.+ ++++++..... .++.+ +. ...|+|+
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~------~~~ee----ll----~~~D~Vv 72 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV------VPLDQ----LA----THADIVV 72 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc------CCHHH----Hh----cCCCEEE
Confidence 578999999999887776654 36644445566666543 45556632211 12222 21 2479999
Q ss_pred EccCChHHHHHHHHhhcCCCEEEEE
Q 018075 257 DCVGFDKTMSTALNATRPGGKVCLI 281 (361)
Q Consensus 257 d~~g~~~~~~~~~~~l~~~G~~v~~ 281 (361)
.|++...+.+.....|..|-.++..
T Consensus 73 i~tp~~~h~e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 73 EAAPASVLRAIVEPVLAAGKKAIVL 97 (271)
T ss_pred ECCCcHHHHHHHHHHHHcCCcEEEe
Confidence 9999887777778888877766654
No 492
>PRK06720 hypothetical protein; Provisional
Probab=93.68 E-value=1.4 Score=36.14 Aligned_cols=82 Identities=26% Similarity=0.306 Sum_probs=48.7
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCCE-EeecCC-CccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVST-DIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (361)
++..++|.| ++++|...+..+...|+ .|+.++++.++.+. +++ .+... .+..+- +..++.+.+.++... -+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 577899998 58999999988888898 57777776654422 222 24321 222211 122333333333221 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++++.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 493
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.64 E-value=1.1 Score=40.84 Aligned_cols=38 Identities=24% Similarity=0.205 Sum_probs=32.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH
Q 018075 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 218 (361)
Q Consensus 180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~ 218 (361)
.+|.|+|+|.+|...++.+...|. .|...+.+++..+.
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~ 45 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA 45 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence 589999999999999998888999 68888888775543
No 494
>PRK08291 ectoine utilization protein EutC; Validated
Probab=93.63 E-value=1.6 Score=40.08 Aligned_cols=93 Identities=17% Similarity=0.241 Sum_probs=58.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEeCChhHHHHH-HHc----CCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075 177 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIA-RNL----GADETAKVSTDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 177 ~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
+...+++|+|+|..|.+.+..+. ..+.+.+...+++.++.+.+ +++ +.. +..+ .+..+.+ .
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al--------~ 196 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV--------A 196 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------c
Confidence 44578999999999988776555 46777888888888876543 433 322 1111 1222222 3
Q ss_pred CccEEEEccCChH-HHHHHHHhhcCCCEEEEEccC
Q 018075 251 GIDVSFDCVGFDK-TMSTALNATRPGGKVCLIGLA 284 (361)
Q Consensus 251 ~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g~~ 284 (361)
+.|+|+.+..... .+.. ..++++-++..+|..
T Consensus 197 ~aDiVi~aT~s~~p~i~~--~~l~~g~~v~~vg~d 229 (330)
T PRK08291 197 GADIIVTTTPSEEPILKA--EWLHPGLHVTAMGSD 229 (330)
T ss_pred cCCEEEEeeCCCCcEecH--HHcCCCceEEeeCCC
Confidence 5899999877542 1222 347888888887754
No 495
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.63 E-value=0.68 Score=40.79 Aligned_cols=82 Identities=26% Similarity=0.341 Sum_probs=49.4
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
++.++||.| ++++|...+..+...|+ .++.++++.++.+.+ ++.+... .+..+ .+..+......++... -+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-VG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence 567899998 58999998888888899 467777776654322 2234321 12211 2222333333333322 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999998874
No 496
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.61 E-value=0.64 Score=40.74 Aligned_cols=83 Identities=17% Similarity=0.207 Sum_probs=46.3
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS 250 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (361)
.+.++||.| +|.+|...++.+...|++.++...++.++.+ ..++ .+... .+..+ .+..+....+.++... ..
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 467899998 5999999999888899854343443444332 2222 23321 11111 1222333333333322 24
Q ss_pred CccEEEEccCC
Q 018075 251 GIDVSFDCVGF 261 (361)
Q Consensus 251 ~~d~vld~~g~ 261 (361)
++|+++.+.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999874
No 497
>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases.; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....
Probab=93.58 E-value=0.42 Score=39.18 Aligned_cols=98 Identities=20% Similarity=0.343 Sum_probs=62.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 253 (361)
++.++|-+|+|. |..++.+++......|++++.+++..+.+++ .+...+..+.. ++.+. + ....||
T Consensus 31 ~~~~vLDlG~G~-G~i~~~la~~~~~~~v~~vDi~~~a~~~a~~n~~~n~~~~v~~~~~---d~~~~---~---~~~~fD 100 (170)
T PF05175_consen 31 KGGRVLDLGCGS-GVISLALAKRGPDAKVTAVDINPDALELAKRNAERNGLENVEVVQS---DLFEA---L---PDGKFD 100 (170)
T ss_dssp TTCEEEEETSTT-SHHHHHHHHTSTCEEEEEEESBHHHHHHHHHHHHHTTCTTEEEEES---STTTT---C---CTTCEE
T ss_pred cCCeEEEecCCh-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCccccccccc---ccccc---c---ccccee
Confidence 778899998765 6666677776544369999999988777655 44442211111 22111 1 146899
Q ss_pred EEEEcc----CCh-------HHHHHHHHhhcCCCEEEEEccCC
Q 018075 254 VSFDCV----GFD-------KTMSTALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 254 ~vld~~----g~~-------~~~~~~~~~l~~~G~~v~~g~~~ 285 (361)
+|+... +.. ..+..+.+.|+++|++..+....
T Consensus 101 ~Iv~NPP~~~~~~~~~~~~~~~i~~a~~~Lk~~G~l~lv~~~~ 143 (170)
T PF05175_consen 101 LIVSNPPFHAGGDDGLDLLRDFIEQARRYLKPGGRLFLVINSH 143 (170)
T ss_dssp EEEE---SBTTSHCHHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EEEEccchhcccccchhhHHHHHHHHHHhccCCCEEEEEeecC
Confidence 998853 221 24667888999999998765443
No 498
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.57 E-value=2 Score=31.10 Aligned_cols=86 Identities=22% Similarity=0.276 Sum_probs=53.8
Q ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075 181 NVMIMGSGPIGLVTLLAARAFG---APRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256 (361)
Q Consensus 181 ~vlI~G~g~~G~~ai~la~~~g---~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl 256 (361)
++.|+|+|.+|.+.+.-+...| .+..++.++++++.+.+ ++++..... .+..+.+ ...|+||
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~advvi 66 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAA--------QEADVVI 66 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHH--------HHTSEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc------CChHHhh--------ccCCEEE
Confidence 5778899999999999888888 64333558888876554 666643321 1222222 2589999
Q ss_pred EccCChHHHHHHHHh---hcCCCEEEEE
Q 018075 257 DCVGFDKTMSTALNA---TRPGGKVCLI 281 (361)
Q Consensus 257 d~~g~~~~~~~~~~~---l~~~G~~v~~ 281 (361)
-|+... .+.+.++. +.++..++.+
T Consensus 67 lav~p~-~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 67 LAVKPQ-QLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp E-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred EEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence 999855 55555554 4456655544
No 499
>PRK06932 glycerate dehydrogenase; Provisional
Probab=93.56 E-value=1.5 Score=39.83 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=57.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257 (361)
Q Consensus 178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld 257 (361)
.|.++.|+|.|.+|...+++++.+|+ .|++.+..... .... .+ .++.+.+ ...|+|.-
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~~~~-----~~~~----~~----~~l~ell--------~~sDiv~l 203 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHKGAS-----VCRE----GY----TPFEEVL--------KQADIVTL 203 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCccc-----cccc----cc----CCHHHHH--------HhCCEEEE
Confidence 47899999999999999999999999 57777653210 0110 00 1222222 35788887
Q ss_pred ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075 258 CVGFDKTM-----STALNATRPGGKVCLIGLAK 285 (361)
Q Consensus 258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~ 285 (361)
+..-.... ...+..|+++..++-++...
T Consensus 204 ~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~ 236 (314)
T PRK06932 204 HCPLTETTQNLINAETLALMKPTAFLINTGRGP 236 (314)
T ss_pred cCCCChHHhcccCHHHHHhCCCCeEEEECCCcc
Confidence 66533222 44678899999888776554
No 500
>PRK06114 short chain dehydrogenase; Provisional
Probab=93.54 E-value=0.95 Score=39.59 Aligned_cols=82 Identities=15% Similarity=0.254 Sum_probs=49.2
Q ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-H-HHHHHH---cCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075 178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-R-LSIARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMG 249 (361)
Q Consensus 178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~ 249 (361)
++.++||.| ++++|.+.++.+...|+ .++.++++.+ . .+.+++ .+... .+..+ .+..+..+.+.++... .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 467899998 68999999998888999 5666666532 2 223222 33221 12111 2223344444444332 2
Q ss_pred CCccEEEEccCC
Q 018075 250 SGIDVSFDCVGF 261 (361)
Q Consensus 250 ~~~d~vld~~g~ 261 (361)
+++|+++++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 569999999874
Done!