Citrus Sinensis ID: 018076
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | 2.2.26 [Sep-21-2011] | |||||||
| Q8L3X9 | 461 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.930 | 0.728 | 0.734 | 1e-139 | |
| P56902 | 421 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.819 | 0.703 | 0.533 | 3e-84 | |
| O94297 | 426 | Putative 3-oxoacyl-[acyl- | yes | no | 0.817 | 0.692 | 0.477 | 1e-80 | |
| Q9NWU1 | 459 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.847 | 0.666 | 0.479 | 2e-77 | |
| Q9D404 | 459 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.808 | 0.636 | 0.477 | 4e-76 | |
| Q0VCA7 | 460 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.808 | 0.634 | 0.470 | 4e-75 | |
| Q9KQH9 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.792 | 0.690 | 0.457 | 4e-70 | |
| P55338 | 415 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.811 | 0.706 | 0.448 | 4e-69 | |
| O34340 | 413 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.789 | 0.690 | 0.451 | 9e-67 | |
| Q8NXE1 | 414 | 3-oxoacyl-[acyl-carrier-p | yes | no | 0.797 | 0.695 | 0.434 | 3e-64 |
| >sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/347 (73%), Positives = 292/347 (84%), Gaps = 11/347 (3%)
Query: 1 MSNSSWRRLFFTRRFDLSRYFSSSSRAEVFDPPPLSPLRRVVVTGIGMVTPLGCGAETTW 60
M+ S+ RR R L+R+ S+SS RRVVVTG+GMVTPLG G ETTW
Sbjct: 1 MATSNLRRHLSASRLRLNRFISTSSSYHSH--------RRVVVTGLGMVTPLGRGVETTW 52
Query: 61 RRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNS 120
RRLI GECGIR +T +DLKM +FD ET+L+ F QL+SKVAA VP G + GEF+E WLNS
Sbjct: 53 RRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWLNS 112
Query: 121 KDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICE 180
K ++A FI YA+CAADEAL DA+WLP+++ +KERTGVSIGGGIGSI D V+AAQ+ICE
Sbjct: 113 K---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICE 169
Query: 181 KRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSD 240
KRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDA RMIQFGD+D
Sbjct: 170 KRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDAD 229
Query: 241 VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEE 300
VMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGFVIGEGSGV+VLEE
Sbjct: 230 VMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEE 289
Query: 301 LEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347
EHAK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+Q
Sbjct: 290 YEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQ 336
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Catalyzes all the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Able to elongate saturated acyl chains from 4 to at least 16 carbons. Uses malonyl-CoA but not acetyl-CoA as primer substrate. When expressed in a heterologous system, reveals a bimodal distribution of products, with peaks at C8 and C14-C16. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1 |
| >sp|P56902|FABF_RHIME 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Rhizobium meliloti (strain 1021) GN=fabF PE=3 SV=2 | Back alignment and function description |
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Score = 312 bits (799), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 166/311 (53%), Positives = 216/311 (69%), Gaps = 15/311 (4%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
+RRVV+TG GMV+PLGCG E +W RL+ G+ R++T F+ E L +
Sbjct: 1 MRRVVITGTGMVSPLGCGTEVSWARLLTGDNAARKVT-------EFEVE-------DLPA 46
Query: 98 KVAAVVPCGI-SSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKER 156
K+A +P G S G FN D W+ K+ R + FI YA+ AAD AL DA W P +
Sbjct: 47 KIACRIPFGDGSDGTFNADDWMEPKEQRKVDPFIVYAMAAADMALADAGWKPESDEDQIS 106
Query: 157 TGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAA 216
TGV IG GIG + VDA + +K RR+SPFFIP LIN+A+G VS+++ +GPNH+
Sbjct: 107 TGVLIGSGIGGLEGIVDAGYTLRDKGPRRISPFFIPGRLINLAAGQVSIRHKLRGPNHSV 166
Query: 217 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276
VTAC+TGAH+IGDA+R+I GD+DVMVAGGTES I +S+AGF +AL+T++N P++A
Sbjct: 167 VTACSTGAHAIGDASRLIALGDADVMVAGGTESPICRISLAGFAACKALSTQHNDNPEKA 226
Query: 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKG 336
SRP+D RDGFV+GEG+G++VLEELEHA+ RGAKIYAEV GYG+SGDA HIT P DG+G
Sbjct: 227 SRPYDADRDGFVMGEGAGIVVLEELEHARARGAKIYAEVIGYGLSGDAFHITAPSEDGEG 286
Query: 337 AILAMTRALKQ 347
A M ALK+
Sbjct: 287 AYRCMQMALKR 297
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Rhizobium meliloti (strain 1021) (taxid: 266834) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.13c PE=3 SV=1 | Back alignment and function description |
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Score = 300 bits (768), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/312 (47%), Positives = 206/312 (66%), Gaps = 17/312 (5%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREIT--PEDLKMGNFDRETQLHAFGQL 95
++RVV+TG+G VTPLG G +T WR LI G+ GI + PE + Q+
Sbjct: 1 MKRVVITGLGAVTPLGNGVKTNWRNLIQGKSGIVSLKGFPE---------------YEQI 45
Query: 96 TSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKE 155
SKVA V+P G E+N +++ R +A F AL +A EAL DA+W+ D+ +K
Sbjct: 46 PSKVAGVIPRGKEKEEWNVLDYVDQGKLREVATFTQLALTSAAEALKDARWIDIDEQEKL 105
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHA 215
TGV G GIG++ D ++ ++ + +R++SP I +ILINM +G++S +YGF NH
Sbjct: 106 ATGVCFGTGIGNLDDALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHT 165
Query: 216 AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275
TACA G H+IGDA I+ G +DV++AGG+ES I+ L++AGF K+R+L+TK+N P+
Sbjct: 166 TTTACAAGCHAIGDAFNFIKLGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKA 225
Query: 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGK 335
ASRPFD RDGFVIGEGS LVLEELEHAK R A IYAE+ GYG++ D++HIT P+ +G
Sbjct: 226 ASRPFDANRDGFVIGEGSAALVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPNGD 285
Query: 336 GAILAMTRALKQ 347
A AM R+LKQ
Sbjct: 286 AAYYAMKRSLKQ 297
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1 | Back alignment and function description |
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Score = 289 bits (740), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/323 (47%), Positives = 208/323 (64%), Gaps = 17/323 (5%)
Query: 25 SRAEVFDPPPLSPL-RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNF 83
S+ + F P+S L RRVV+TGIG+VTPLG G W RLI GE GI + E+ K
Sbjct: 27 SKRKFFGTVPISRLHRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYK---- 82
Query: 84 DRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHD 143
+ VAA VP G G+FNE ++++ D +S++ A+ AA+ A+ D
Sbjct: 83 ----------SIPCSVAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKD 132
Query: 144 AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHV 203
+ W P + + TGV+IG G+ + + A K ++SPFF+P+IL+NMA+G V
Sbjct: 133 SGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQV 192
Query: 204 SMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSR 263
S++Y +GPNHA TAC TGAH++GD+ R I GD+DVMVAGGT+S I LS+AGF ++R
Sbjct: 193 SIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRAR 252
Query: 264 ALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGD 323
AL+T N P+ A RPF RDGFV+GEG+ VLVLEE EHA +R A+IYAEV GYG+SGD
Sbjct: 253 ALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGD 310
Query: 324 AHHITQPHIDGKGAILAMTRALK 346
A HIT P +G+GA+ M ALK
Sbjct: 311 AGHITAPDPEGEGALRCMAAALK 333
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1 | Back alignment and function description |
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Score = 285 bits (729), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/308 (47%), Positives = 204/308 (66%), Gaps = 16/308 (5%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVV+TGIG+VTPLG G + W RL+ GE GI + ++ K +
Sbjct: 42 RRVVITGIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYK--------------NIPCS 87
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
VAA VP G G+FNE+++++ D +S++ A+ AA+ AL D+ W P + + TG
Sbjct: 88 VAAYVPRGPHEGQFNEENFVSKSDAKSMSSSTIMAVGAAELALKDSGWHPKREADQVATG 147
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V+IG G+ + + A + K ++SPFF+P+ILINMA+G VS++Y +GPNH+ T
Sbjct: 148 VAIGMGMVPLEVISETALLFQTKGYNKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVST 207
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
AC TGAH++GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL++ N P+ A R
Sbjct: 208 ACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSS--NPDPKLACR 265
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
PF RDGFV+GEG+ VLVLEE EHA +RGA+IYAE+ GYG+SGDA HIT P +G+GA+
Sbjct: 266 PFHPERDGFVMGEGAAVLVLEEHEHAVQRGARIYAEILGYGLSGDAGHITAPDPEGEGAL 325
Query: 339 LAMTRALK 346
M A+K
Sbjct: 326 RCMAAAVK 333
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q0VCA7|OXSM_BOVIN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Bos taurus GN=OXSM PE=2 SV=1 | Back alignment and function description |
|---|
Score = 281 bits (720), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 145/308 (47%), Positives = 198/308 (64%), Gaps = 16/308 (5%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVV+TGIG+VTPLG G + W RL+ GE GI + ++ + +
Sbjct: 43 RRVVITGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDE--------------YQSIPCS 88
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
VAA VP G G+FNE +++ D +S++ A+ AA+ AL DA W P + + TG
Sbjct: 89 VAAYVPRGCDEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQSEADQAATG 148
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V+IG G+ + + A K ++SPFF+P+IL+NMASG VS+++ +GPNHA T
Sbjct: 149 VAIGMGMVPLEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVST 208
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
AC TGAH++GD+ R + GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A R
Sbjct: 209 ACTTGAHAVGDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALST--NTDPKSACR 266
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
PF RDGFV+GEG+ VLVLEE HA +RGA++YAE+ GYG+SGDA HIT P G+GA
Sbjct: 267 PFHPQRDGFVMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAF 326
Query: 339 LAMTRALK 346
M A+K
Sbjct: 327 RCMAAAVK 334
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May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function. Bos taurus (taxid: 9913) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 4 EC: 1 |
| >sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3 | Back alignment and function description |
|---|
Score = 265 bits (677), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/308 (45%), Positives = 198/308 (64%), Gaps = 22/308 (7%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+GM++P+G E++W+ L+ G+ GI I E NF +++
Sbjct: 4 RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNI--EHFDTTNF------------STR 49
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
A +V F+ + +++ KD R + FI Y + A +AL D+ L ++ R G
Sbjct: 50 FAGLVKG------FDCEQYMSKKDARKMDLFIQYGIAAGIQALEDS-GLEVNEENAARIG 102
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V+IG GIG + Q + EK R++SPFF+P ++NM +G++S+ G +GPN A T
Sbjct: 103 VAIGSGIGGLELIETGHQALIEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAIST 162
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
AC TG H+IG AARMI +GD+D MVAGG E + L MAGF ++AL+T+ N PQ+ASR
Sbjct: 163 ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASR 221
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
P+D RDGFV+G+G+G++VLEE EHAK RGAKIYAEV G+GMSGDA+H+T P DG G
Sbjct: 222 PWDKDRDGFVLGDGAGIMVLEEYEHAKARGAKIYAEVVGFGMSGDAYHMTSPSEDGSGGA 281
Query: 339 LAMTRALK 346
LAM A++
Sbjct: 282 LAMEAAMR 289
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Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2 | Back alignment and function description |
|---|
Score = 261 bits (668), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 143/319 (44%), Positives = 206/319 (64%), Gaps = 26/319 (8%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+GM++P+G E++W+ L+ G+ GI I E NF +++
Sbjct: 4 RRVVVTGMGMLSPVGNTVESSWKALLEGQSGIVNI--EHFDATNF------------STR 49
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
A +V +F+ +++ KD R + FI Y + A +AL D+ +++ R G
Sbjct: 50 FAGLVK------DFDCTEYMSKKDARKMDLFIQYGIAAGIQALDDSGLEITEE-NAARVG 102
Query: 159 VSIGGGIGSISDTVDAAQ-MICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
V+IG GIG + D ++A + EK R++SPFF+P ++NM +G++S+ G +GPN A
Sbjct: 103 VAIGSGIGGL-DLIEAGHSALVEKGPRKVSPFFVPSTIVNMVAGNLSIMRGLRGPNIAIS 161
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TAC TG H+IG AARMI +GD++ MVAGG E + L MAGF ++AL+T+ N PQ+AS
Sbjct: 162 TACTTGLHNIGHAARMIAYGDAEAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKAS 220
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RP+D GRDGFV+G+G+GV+VLEE EHAK RGAKIYAE+ G+GMSGDA+H+T P DG G
Sbjct: 221 RPWDKGRDGFVLGDGAGVMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGG 280
Query: 338 ILAMTRALKQVVHNVDGFE 356
LAM A++ N+ G +
Sbjct: 281 ALAMEAAMRDA--NITGTQ 297
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis. Vibrio harveyi (taxid: 669) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (648), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 139/308 (45%), Positives = 193/308 (62%), Gaps = 23/308 (7%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
+RVVVTG+G ++PLG +T+W I G GI IT D + + +K
Sbjct: 4 KRVVVTGLGALSPLGNDVDTSWNNAINGVSGIGPITRVDAE--------------EYPAK 49
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
VAA + +FN + +++ K+ R + RF YA+ AA A+ DA +D+ R G
Sbjct: 50 VAAELK------DFNVEDYMDKKEARKMDRFTQYAVVAAKMAVEDADLNITDE-IAPRVG 102
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V +G GIG + ++ K RR+SPFF+P ++ +MA+G +S+ G +G N VT
Sbjct: 103 VWVGSGIGGLETLESQFEIFLTKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVT 162
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
ACATG +SIGDA ++IQ GD+DVMV GGTE+ + +S AGF ++AL+T N P+ ASR
Sbjct: 163 ACATGTNSIGDAFKVIQRGDADVMVTGGTEAPLTRMSFAGFSANKALST--NPDPKTASR 220
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
PFD RDGFV+GEG+G++VLEELEHA RGAKIY E+ GYG +GDA+HIT P DG+G
Sbjct: 221 PFDKNRDGFVMGEGAGIIVLEELEHALARGAKIYGEIVGYGSTGDAYHITAPAQDGEGGA 280
Query: 339 LAMTRALK 346
AM A+K
Sbjct: 281 RAMQEAIK 288
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Bacillus subtilis (strain 168) (taxid: 224308) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
| >sp|Q8NXE1|FABF_STAAW 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Staphylococcus aureus (strain MW2) GN=fabF PE=1 SV=1 | Back alignment and function description |
|---|
Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/311 (43%), Positives = 196/311 (63%), Gaps = 23/311 (7%)
Query: 35 LSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQ 94
+S +RVV+TG+G ++P+G +TTW + G GI +IT D + +H G+
Sbjct: 1 MSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTE------PYSVHLAGE 54
Query: 95 LTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQK 154
L + FN + ++ K+ R + RF YA+ AA EA+ DA+ L ++
Sbjct: 55 LKN--------------FNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQ-LDINENTA 99
Query: 155 ERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNH 214
+R GV IG GIG + A + + +K RR+SPFF+P ++ +MA+G VS+ G +GPN
Sbjct: 100 DRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNG 159
Query: 215 AAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274
A VTACATG +SIG+A +++Q GD+D M+ GGTE+ I +++AGF SRAL+T N +
Sbjct: 160 ATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIE 217
Query: 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG 334
A RPF GRDGFV+GEG+G+LV+E LE A+ RGA IYAE+ GYG +GDA+HIT P +G
Sbjct: 218 TACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEG 277
Query: 335 KGAILAMTRAL 345
+G AM A+
Sbjct: 278 EGGSRAMQAAM 288
|
Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Staphylococcus aureus (strain MW2) (taxid: 196620) EC: 2 EC: . EC: 3 EC: . EC: 1 EC: . EC: 1 EC: 7 EC: 9 |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | ||||||
| TAIR|locus:2058359 | 461 | AT2G04540 [Arabidopsis thalian | 0.930 | 0.728 | 0.657 | 1.5e-115 | |
| TIGR_CMR|SPO_2271 | 421 | SPO_2271 "3-oxoacyl-(acyl carr | 0.806 | 0.691 | 0.486 | 2.7e-68 | |
| ASPGD|ASPL0000064843 | 430 | AN7489 [Emericella nidulans (t | 0.747 | 0.627 | 0.481 | 3.5e-68 | |
| UNIPROTKB|Q0C090 | 428 | fabF "3-oxoacyl-[acyl-carrier- | 0.800 | 0.675 | 0.467 | 1.8e-64 | |
| UNIPROTKB|E1BYY7 | 461 | OXSM "3-oxoacyl-[acyl-carrier- | 0.800 | 0.626 | 0.425 | 6.9e-63 | |
| UNIPROTKB|E2R866 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.795 | 0.623 | 0.442 | 5.5e-61 | |
| UNIPROTKB|G3V6R7 | 456 | Oxsm "3-oxoacyl-[acyl-carrier- | 0.795 | 0.629 | 0.435 | 1.7e-59 | |
| POMBASE|SPBC887.13c | 426 | SPBC887.13c "3-oxoacyl-[acyl-c | 0.806 | 0.683 | 0.421 | 2.2e-59 | |
| UNIPROTKB|Q9NWU1 | 459 | OXSM "3-oxoacyl-[acyl-carrier- | 0.795 | 0.625 | 0.435 | 9.3e-59 | |
| UNIPROTKB|F1MXW5 | 460 | OXSM "3-oxoacyl-[acyl-carrier- | 0.795 | 0.623 | 0.422 | 1.2e-58 |
| TAIR|locus:2058359 AT2G04540 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1139 (406.0 bits), Expect = 1.5e-115, P = 1.5e-115
Identities = 228/347 (65%), Positives = 264/347 (76%)
Query: 1 MSNSSWRRLFFTRRFDLSRYFSSSSRAEVFDXXXXXXXXXXXXTGIGMVTPLGCGAETTW 60
M+ S+ RR R L+R+ S+SS TG+GMVTPLG G ETTW
Sbjct: 1 MATSNLRRHLSASRLRLNRFISTSS--------SYHSHRRVVVTGLGMVTPLGRGVETTW 52
Query: 61 RRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNS 120
RRLI GECGIR +T +DLKM +FD ET+L+ F QL+SKVAA VP G + GEF+E WLNS
Sbjct: 53 RRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWLNS 112
Query: 121 KDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVDAAQMICE 180
K ++A FI YA+CAADEAL DA+WLP+++ +KERTGV D V+AAQ+ICE
Sbjct: 113 K---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICE 169
Query: 181 KRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSD 240
KRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDA RMIQFGD+D
Sbjct: 170 KRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDAD 229
Query: 241 VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXXXXXXXXX 300
VMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASRPFDC RDGF
Sbjct: 230 VMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEE 289
Query: 301 XXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347
HAK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+Q
Sbjct: 290 YEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQ 336
|
|
| TIGR_CMR|SPO_2271 SPO_2271 "3-oxoacyl-(acyl carrier protein) synthase II" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 693 (249.0 bits), Expect = 2.7e-68, P = 2.7e-68
Identities = 148/304 (48%), Positives = 188/304 (61%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TG+G++TPL G E TW RL+ G+ G IT FD A G +T+ A V
Sbjct: 7 TGLGLITPLASGVEETWSRLLEGQSGAGPIT-------RFDAV----ASG-VTTTYACEV 54
Query: 104 PCGISS-GEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXX 162
P G S G FN D W+ K+ R I FI Y++ AA+ A DA WLP D+ + RTGV
Sbjct: 55 PRGDGSDGTFNPDDWMAPKEQRKIEDFILYSIAAAEMACKDANWLPEDEEDRLRTGVLIG 114
Query: 163 XXXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACAT 222
+ A +I EK RR+SPFFIP LIN+ASG VS+++GF+GPNH+ VTAC+T
Sbjct: 115 SGIGGLGSIAETANLIKEKGPRRVSPFFIPGALINLASGQVSIRHGFKGPNHSVVTACST 174
Query: 223 GAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282
GAH+IGDA+R+I+ GD+DVM+AGG E+ I + +AGF +AL+TKY P+ ASRP+D
Sbjct: 175 GAHAIGDASRIIRAGDADVMIAGGGEACICEIGIAGFNACKALSTKYADNPKAASRPYDA 234
Query: 283 GRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMT 342
RDGF HAK RGAKIYAEV GYGMSGDA+HIT P G GA +M
Sbjct: 235 DRDGFVMGEGAGIVVLEDYEHAKARGAKIYAEVLGYGMSGDAYHITAPSETGDGAERSMR 294
Query: 343 RALK 346
AL+
Sbjct: 295 AALR 298
|
|
| ASPGD|ASPL0000064843 AN7489 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 692 (248.7 bits), Expect = 3.5e-68, P = 3.5e-68
Identities = 141/293 (48%), Positives = 181/293 (61%)
Query: 55 GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI-SSGEFN 113
G TW+RL+ G CGI I D + + L ++AAVVP G + G +
Sbjct: 30 GVRRTWKRLLDGHCGIVNIRHRDAR------------YADLPCEIAAVVPSGARAEGRWT 77
Query: 114 EDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXXXXXXXXDTVD 173
WL+ D R +ARF YA+ AA+EAL DA+W P + Q E TGV + D
Sbjct: 78 ASEWLSKDDERKMARFAQYAMAAAEEALEDAEWKPKAEDQLEATGVCLGSGIGNFDEIYD 137
Query: 174 AAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARM 233
A K ++LSP F+P++LIN+ +GH+SMKYGF GPNH+A TAC TGAHSIGDAAR
Sbjct: 138 AVVAYDTKGYKKLSPLFVPKLLINLGAGHISMKYGFMGPNHSATTACTTGAHSIGDAARF 197
Query: 234 IQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFXXXXXX 293
I GD+DVM+AGG ES I L++ GF ++R+L T YN P+++SRPFD RDGF
Sbjct: 198 IACGDADVMLAGGAESCIHPLAIGGFARARSLATAYNDRPEKSSRPFDADRDGFVVGEE- 256
Query: 294 XXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 346
HAK RGA+IYAEV+GYG SGDAHH+T P +G GA+LAM +ALK
Sbjct: 257 ---------HAKARGARIYAEVKGYGCSGDAHHMTAPKANGGGALLAMKKALK 300
|
|
| UNIPROTKB|Q0C090 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Hyphomonas neptunium ATCC 15444 (taxid:228405)] | Back alignment and assigned GO terms |
|---|
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 145/310 (46%), Positives = 185/310 (59%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TGIG+V+PL G E TW RLI G+ G K+ NFD L K+A V
Sbjct: 9 TGIGIVSPLANGREATWERLIAGKSGAG-------KIDNFDAS-------DLPCKIAFQV 54
Query: 104 P--CGISSGE-----FNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKER 156
P G GE F+ D L+SK+ R I FI Y + AADEAL D+ QKER
Sbjct: 55 PWASGRGGGEGDEHAFDPDKVLSSKEQRRIDEFILYGIAAADEALADSGLKLETDDQKER 114
Query: 157 TGVXXXXXXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAA 216
GV + + + E R++SPFFIP LIN+ASG +S+++G +GPNH+
Sbjct: 115 AGVMIGSGIGGLETIYETSITLHEHGPRKVSPFFIPASLINLASGQISIRHGLKGPNHSV 174
Query: 217 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276
VTACATGAH+IGD+AR+I +GD+DVMVAGG E+ I L +AGFC ++A++T +N TP++A
Sbjct: 175 VTACATGAHAIGDSARLISYGDADVMVAGGAEAVIGRLGIAGFCAAKAMSTSFNDTPEKA 234
Query: 277 SRPFDCGRDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKG 336
SRP+D RDGF HAK RGAKIYAEV GYG++GDAHHIT P +G
Sbjct: 235 SRPYDKDRDGFVMGEGAAVLVLEEYEHAKARGAKIYAEVAGYGLTGDAHHITAPAEGAEG 294
Query: 337 AILAMTRALK 346
AM ALK
Sbjct: 295 GYRAMKMALK 304
|
|
| UNIPROTKB|E1BYY7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 129/303 (42%), Positives = 185/303 (61%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TGIG+V+PLG G + W+RL+ G+ GI + E+ + + +VAA V
Sbjct: 47 TGIGLVSPLGVGTQLVWKRLLQGDSGIASLDGEE--------------YAGVPCRVAACV 92
Query: 104 PCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXX 163
P G G F E+S+++ + +S++ A+ AA+ A+ D+ W P + R GV
Sbjct: 93 PRGDEEGHFKEESFVSKSEIKSMSSATVMAIGAAELAMKDSGWSPQSEEDHLRAGVAIGM 152
Query: 164 XXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATG 223
+ D A + K ++SPFF+P+IL+NMA+GH+S+KY +GPNHA TAC TG
Sbjct: 153 GMVPLEEISDTASLFKTKGYSKVSPFFVPKILVNMAAGHISIKYQLKGPNHAVSTACTTG 212
Query: 224 AHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283
AH+IGD+ R I GD+DVM+AGGTE+ I LS+AGF ++RAL+T +N +P++A RPFD
Sbjct: 213 AHAIGDSFRFIALGDADVMLAGGTEACISPLSLAGFARARALSTGFNASPKKACRPFDSQ 272
Query: 284 RDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 343
R+GF HA +RGA+IYAEV GYG+SGDA HIT P+ +G GA M+
Sbjct: 273 REGFVMGEGAAVLVLEEYRHAVQRGARIYAEVLGYGLSGDACHITAPNPEGDGAFRCMSA 332
Query: 344 ALK 346
A+K
Sbjct: 333 AIK 335
|
|
| UNIPROTKB|E2R866 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 134/303 (44%), Positives = 180/303 (59%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TGIG+VTPLG G + W RLI GE GI + E+ K + VAA V
Sbjct: 48 TGIGLVTPLGVGTQLVWDRLIRGESGIMSLVGEEYK--------------SIPCSVAAYV 93
Query: 104 PCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXX 163
P G G+FNE ++++ D +S++ A+ AA+ A+ D+ WLP + + TGV
Sbjct: 94 PRGCDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMRDSGWLPQSEADQAATGVAIGM 153
Query: 164 XXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATG 223
+ A M K ++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TG
Sbjct: 154 GMVPLEIVSETALMFQTKGYSKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTG 213
Query: 224 AHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283
AH++GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF
Sbjct: 214 AHAVGDSFRFIAQGDADVMVAGGTDSCISPLSLAGFSRARALST--NPDPKLACRPFHPK 271
Query: 284 RDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 343
RDGF HA +RGA+IYAEV GYG+SGDA HIT P +G+GA+ M
Sbjct: 272 RDGFVMGEGAAVLVLEEYDHAVQRGARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAA 331
Query: 344 ALK 346
A+K
Sbjct: 332 AVK 334
|
|
| UNIPROTKB|G3V6R7 Oxsm "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 132/303 (43%), Positives = 180/303 (59%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TGIG+VTPLG G + W RL+ GE GI + ++ K + VAA V
Sbjct: 44 TGIGLVTPLGVGTQLVWDRLLRGESGIVSVVGDEYK--------------SIPCSVAAFV 89
Query: 104 PCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXX 163
P G G+FNE ++++ D +S++ A+ AA+ AL D+ W P + + TGV
Sbjct: 90 PRGSDKGQFNEQNFVSKSDAKSMSSPTIMAVGAAELALKDSGWYPKLEADQVATGVAIGM 149
Query: 164 XXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATG 223
+ A M K ++SPFF+P+ILINMA+G VS++Y +GPNH+ TAC TG
Sbjct: 150 GMVPLEVVSETALMFQTKGYSKVSPFFVPKILINMAAGQVSIRYKLKGPNHSVSTACTTG 209
Query: 224 AHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283
AH++GD+ R+I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF
Sbjct: 210 AHAVGDSFRLIAHGDADVMVAGGTDSCISPLSLAGFSRARALST--NPDPKLACRPFHPE 267
Query: 284 RDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 343
RDGF HA +RGA+IYAEV GYG+SGDA HIT P +G+GA+ M
Sbjct: 268 RDGFVMGEGAAVLVLEEHEHAVQRGARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAA 327
Query: 344 ALK 346
A+K
Sbjct: 328 AVK 330
|
|
| POMBASE|SPBC887.13c SPBC887.13c "3-oxoacyl-[acyl-carrier-protein]-synthase condensing enzyme (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 128/304 (42%), Positives = 181/304 (59%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TG+G VTPLG G +T WR LI G+ GI + + F + Q+ SKVA V+
Sbjct: 7 TGLGAVTPLGNGVKTNWRNLIQGKSGI-------VSLKGFPE------YEQIPSKVAGVI 53
Query: 104 PCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXX 163
P G E+N +++ R +A F AL +A EAL DA+W+ D+ +K TGV
Sbjct: 54 PRGKEKEEWNVLDYVDQGKLREVATFTQLALTSAAEALKDARWIDIDEQEKLATGVCFGT 113
Query: 164 XXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATG 223
D ++ ++ + +R++SP I +ILINM +G++S +YGF NH TACA G
Sbjct: 114 GIGNLDDALNENGVLNKAGIRKVSPRVISKILINMPAGYISQRYGFTALNHTTTTACAAG 173
Query: 224 AHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283
H+IGDA I+ G +DV++AGG+ES I+ L++AGF K+R+L+TK+N P+ ASRPFD
Sbjct: 174 CHAIGDAFNFIKLGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDAN 233
Query: 284 RDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 343
RDGF HAK R A IYAE+ GYG++ D++HIT P+ +G A AM R
Sbjct: 234 RDGFVIGEGSAALVLEELEHAKNRNAHIYAEIVGYGLASDSYHITAPNPNGDAAYYAMKR 293
Query: 344 ALKQ 347
+LKQ
Sbjct: 294 SLKQ 297
|
|
| UNIPROTKB|Q9NWU1 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 132/303 (43%), Positives = 176/303 (58%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TGIG+VTPLG G W RLI GE GI + E+ K + VAA V
Sbjct: 47 TGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEEYK--------------SIPCSVAAYV 92
Query: 104 PCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXX 163
P G G+FNE ++++ D +S++ A+ AA+ A+ D+ W P + + TGV
Sbjct: 93 PRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGM 152
Query: 164 XXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATG 223
+ A K ++SPFF+P+IL+NMA+G VS++Y +GPNHA TAC TG
Sbjct: 153 GMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTG 212
Query: 224 AHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283
AH++GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF
Sbjct: 213 AHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPK 270
Query: 284 RDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 343
RDGF HA +R A+IYAEV GYG+SGDA HIT P +G+GA+ M
Sbjct: 271 RDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAA 330
Query: 344 ALK 346
ALK
Sbjct: 331 ALK 333
|
|
| UNIPROTKB|F1MXW5 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 128/303 (42%), Positives = 175/303 (57%)
Query: 44 TGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVV 103
TGIG+VTPLG G + W RL+ GE GI + ++ + + VAA V
Sbjct: 48 TGIGLVTPLGVGTQLVWDRLVRGESGIVSLVGDE--------------YQSIPCSVAAYV 93
Query: 104 PCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVXXXX 163
P G G+FNE +++ D +S++ A+ AA+ AL DA W P + + TGV
Sbjct: 94 PRGCDEGQFNEQNFVPKSDTKSMSPPTVMAIAAAELALKDAGWHPQSEADQAATGVAIGM 153
Query: 164 XXXXXXDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATG 223
+ A K ++SPFF+P+IL+NMASG VS+++ +GPNHA TAC TG
Sbjct: 154 GMVPLEVISETALTFQTKGYSKVSPFFVPKILVNMASGQVSIRHKLKGPNHAVSTACTTG 213
Query: 224 AHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283
AH++GD+ R + GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A RPF
Sbjct: 214 AHAVGDSFRFVAHGDADVMVAGGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQ 271
Query: 284 RDGFXXXXXXXXXXXXXXXHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 343
RDGF HA +RGA++YAE+ GYG+SGDA HIT P G+GA M
Sbjct: 272 RDGFVMGEGAAVLVLEEHRHALRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAFRCMAA 331
Query: 344 ALK 346
A+K
Sbjct: 332 AVK 334
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8L3X9 | KASM_ARATH | 2, ., 3, ., 1, ., 4, 1 | 0.7348 | 0.9307 | 0.7288 | yes | no |
| P56902 | FABF_RHIME | 2, ., 3, ., 1, ., 1, 7, 9 | 0.5337 | 0.8199 | 0.7030 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.3.1 | 0.963 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 361 | |||
| PLN02836 | 437 | PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei | 0.0 | |
| PRK07314 | 411 | PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei | 1e-150 | |
| TIGR03150 | 407 | TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei | 1e-147 | |
| cd00834 | 406 | cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot | 1e-135 | |
| PRK06333 | 424 | PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei | 1e-127 | |
| PTZ00050 | 421 | PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein | 1e-126 | |
| COG0304 | 412 | COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy | 1e-113 | |
| PRK08439 | 406 | PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei | 1e-90 | |
| PRK08722 | 414 | PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei | 3e-87 | |
| PLN02787 | 540 | PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei | 4e-68 | |
| PRK14691 | 342 | PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei | 2e-64 | |
| PRK07967 | 406 | PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei | 1e-61 | |
| PRK07910 | 418 | PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei | 6e-57 | |
| pfam00109 | 243 | pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, | 2e-56 | |
| PRK09116 | 405 | PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei | 1e-55 | |
| cd00828 | 407 | cd00828, elong_cond_enzymes, "elongating" condensi | 1e-47 | |
| PRK06501 | 425 | PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei | 3e-38 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 5e-37 | |
| cd00832 | 399 | cd00832, CLF, Chain-length factor (CLF) is a facto | 6e-34 | |
| PRK07103 | 410 | PRK07103, PRK07103, polyketide beta-ketoacyl:acyl | 3e-31 | |
| cd00825 | 332 | cd00825, decarbox_cond_enzymes, decarboxylating co | 3e-28 | |
| cd00833 | 421 | cd00833, PKS, polyketide synthases (PKSs) polymeri | 5e-28 | |
| PRK09185 | 392 | PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei | 2e-22 | |
| COG3321 | 1061 | COG3321, COG3321, Polyketide synthase modules and | 5e-15 | |
| TIGR02813 | 2582 | TIGR02813, omega_3_PfaA, polyketide-type polyunsat | 7e-15 | |
| smart00825 | 298 | smart00825, PKS_KS, Beta-ketoacyl synthase | 5e-13 | |
| cd00327 | 254 | cd00327, cond_enzymes, Condensing enzymes; Family | 1e-11 | |
| cd00751 | 386 | cd00751, thiolase, Thiolase are ubiquitous enzymes | 2e-06 | |
| PRK06147 | 348 | PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protei | 1e-05 | |
| PRK06519 | 398 | PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei | 2e-05 | |
| PRK05790 | 393 | PRK05790, PRK05790, putative acyltransferase; Prov | 9e-05 | |
| PRK05952 | 381 | PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei | 2e-04 | |
| pfam02801 | 119 | pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase | 2e-04 | |
| PRK09052 | 399 | PRK09052, PRK09052, acetyl-CoA acetyltransferase; | 3e-04 | |
| TIGR01930 | 386 | TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans | 3e-04 | |
| pfam00108 | 262 | pfam00108, Thiolase_N, Thiolase, N-terminal domain | 4e-04 | |
| COG0183 | 392 | COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid | 0.002 |
| >gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Score = 589 bits (1521), Expect = 0.0
Identities = 244/314 (77%), Positives = 277/314 (88%), Gaps = 3/314 (0%)
Query: 34 PLSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFG 93
P P RRVVVTG+G+VTPLGCG ETTWRRLI GECG+R +T +DLKM + D ETQL+
Sbjct: 1 PPLPTRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLD 60
Query: 94 QLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQ 153
QL S+VAA+VP G G+F+E+ WLN RS +RFI YALCAADEAL DA+WLPS+
Sbjct: 61 QLPSRVAALVPRGTGPGDFDEELWLN---SRSSSRFIGYALCAADEALSDARWLPSEDEA 117
Query: 154 KERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPN 213
KERTGVSIGGGIGSI+D ++AAQ+ICEKRLRRLSPFF+PRILINMA+GHVS++YGFQGPN
Sbjct: 118 KERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPN 177
Query: 214 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273
HAAVTACATGAHSIGDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N P
Sbjct: 178 HAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCP 237
Query: 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHID 333
EASRPFDC RDGFVIGEG+GVLVLEELEHAK+RGAKIYAEVRGYGMSGDAHHITQPH D
Sbjct: 238 TEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHED 297
Query: 334 GKGAILAMTRALKQ 347
G+GA+LAMTRAL+Q
Sbjct: 298 GRGAVLAMTRALQQ 311
|
Length = 437 |
| >gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 429 bits (1105), Expect = e-150
Identities = 162/309 (52%), Positives = 212/309 (68%), Gaps = 22/309 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
RRVVVTG+G V+PLG E+TW+ L+ G+ GI IT +FD L
Sbjct: 1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPIT-------HFDTS-------DLAV 46
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
K+A V +FN D +++ K+ R + RFI Y + AA +A+ DA +++ +R
Sbjct: 47 KIAGEVK------DFNPDDYMSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEE-NADRI 99
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
GV IG GIG + + + EK RR+SPFF+P +INMA+GHVS++YG +GPNH+ V
Sbjct: 100 GVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIV 159
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TACATGAH+IGDAAR+I +GD+DVMVAGG E++I L +AGF +RAL+T+ N P+ AS
Sbjct: 160 TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTR-NDDPERAS 218
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RPFD RDGFV+GEG+G+LVLEELEHAK RGAKIYAEV GYGM+GDA+H+T P DG+GA
Sbjct: 219 RPFDKDRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGA 278
Query: 338 ILAMTRALK 346
AM ALK
Sbjct: 279 ARAMKLALK 287
|
Length = 411 |
| >gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Score = 421 bits (1086), Expect = e-147
Identities = 162/308 (52%), Positives = 206/308 (66%), Gaps = 22/308 (7%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+G VTPLG G E W L+ G+ GI IT FD L K
Sbjct: 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPIT-------RFDAS-------DLPVK 46
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
+A V +F+ + +++ K+ R + RFI YAL AA EA+ D+ ++ ER G
Sbjct: 47 IAGEVK------DFDPEDYIDKKEARRMDRFIQYALAAAKEAVEDSGLDIEEE-DAERVG 99
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V IG GIG + + ++ EK RR+SPFFIP +INMA+G +S++YG +GPNHA VT
Sbjct: 100 VIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVT 159
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
ACATG H+IGDA R+IQ GD+DVM+AGG E++I L +AGF +AL+T N P++ASR
Sbjct: 160 ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALST-RNDDPEKASR 218
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
PFD RDGFV+GEG+GVLVLEELEHAK RGAKIYAE+ GYGMSGDA+HIT P +G+GA
Sbjct: 219 PFDKDRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAA 278
Query: 339 LAMTRALK 346
AM ALK
Sbjct: 279 RAMRAALK 286
|
3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407 |
| >gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Score = 390 bits (1004), Expect = e-135
Identities = 154/309 (49%), Positives = 202/309 (65%), Gaps = 22/309 (7%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVV+TG+G VTPLG G E W L+ G GIR IT D S+
Sbjct: 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFD--------------ASGFPSR 46
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
+A VP +F+ + +L+ K+ R + RF +AL AA+EAL DA P + ER G
Sbjct: 47 IAGEVP------DFDPEDYLDRKELRRMDRFAQFALAAAEEALADAGLDPEELD-PERIG 99
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V IG GIG ++ +A + + EK RR+SPFF+P L NMA+G V+++ G +GPN+ T
Sbjct: 100 VVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVST 159
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
ACA+GAH+IGDAAR+I+ G +DV++AGG E+ I L++AGF RAL+T+ + P++ASR
Sbjct: 160 ACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRND-DPEKASR 218
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
PFD RDGFV+GEG+GVLVLE LEHAK RGAKIYAE+ GYG S DA+HIT P DG+GA
Sbjct: 219 PFDKDRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAA 278
Query: 339 LAMTRALKQ 347
AM AL
Sbjct: 279 RAMRAALAD 287
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406 |
| >gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 371 bits (955), Expect = e-127
Identities = 153/311 (49%), Positives = 204/311 (65%), Gaps = 16/311 (5%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
+R+VVTG+G V+PLGCG ET W+RL+ G+ GIR +T + G L +K
Sbjct: 4 KRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFPV--------------GDLATK 49
Query: 99 VAAVVPCGISSGE--FNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKER 156
+ VP E F+ D +L+ KD R + RFI +A+ AA EAL A W P +ER
Sbjct: 50 IGGQVPDLAEDAEAGFDPDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRER 109
Query: 157 TGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAA 216
T IG G+G +A + + + RRLSPF IP L NMA+GHVS++YGF+GP A
Sbjct: 110 TATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAP 169
Query: 217 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276
VTACA G +IGDAAR+I+ G++DV V GGTE++ID +S+AGF +RAL+T++N P++A
Sbjct: 170 VTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQA 229
Query: 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKG 336
SRPFD RDGFV+GEG+G+LV+E LEHA RGA AE+ GYG S DA+H+T DG+G
Sbjct: 230 SRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEG 289
Query: 337 AILAMTRALKQ 347
A AM AL+Q
Sbjct: 290 ARRAMLIALRQ 300
|
Length = 424 |
| >gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Score = 368 bits (947), Expect = e-126
Identities = 152/302 (50%), Positives = 201/302 (66%), Gaps = 11/302 (3%)
Query: 48 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGI 107
+VTPLG GAE+TW LI G+ GIR++T + + E + + A +PC I
Sbjct: 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKAL------ENLVAAMPCQI 54
Query: 108 SSGEFNEDSWLNSKDHRSIA---RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGG 164
++ + + D R +A+ AA EAL DAK + +ER GV+IG G
Sbjct: 55 AAEVDQSE--FDPSDFAPTKRESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSG 112
Query: 165 IGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGA 224
IGS++D D + + EK R+SP+FIP+IL NMA+G V++K+ +GP+ +AVTACATGA
Sbjct: 113 IGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGA 172
Query: 225 HSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284
H IG+A R I++G++D+M+ GGTE+SI +S AGF + RAL TKYN PQ ASRPFD R
Sbjct: 173 HCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232
Query: 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRA 344
GFV+GEG+G+LVLEELEHA +RGAKIYAE+RGYG S DAHHIT PH DG+GA M A
Sbjct: 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENA 292
Query: 345 LK 346
LK
Sbjct: 293 LK 294
|
Length = 421 |
| >gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-113
Identities = 146/311 (46%), Positives = 195/311 (62%), Gaps = 25/311 (8%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVV+TG+G+V+ LG G E W L+ G+ GIR IT FD L K
Sbjct: 3 RRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPIT-------RFDASG-------LGVK 48
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
+A + + D + K+ R + RF A+ AA EAL DA + R G
Sbjct: 49 IAGEIK--------DLDDQIAKKERRFMDRFSQLAVVAAVEALEDAGLDN-ELNVDMRVG 99
Query: 159 VSIGGGIGSISDTVDAA-QMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
V+IG GIG + D ++ E +R+SPF +P++L N+A+G+V++ +G +GPN+ V
Sbjct: 100 VAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPV 159
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TACATGAH+IGDA R+I+ G +DV++AGG E++I L +AGF RAL+T+ N P++AS
Sbjct: 160 TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEKAS 218
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RPFD RDGFVIGEG+G LVLEELEHA RGAKIYAE+ GYG + DA+HIT P DG+GA
Sbjct: 219 RPFDKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGA 278
Query: 338 ILAMTRALKQV 348
I AM AL
Sbjct: 279 IRAMRAALADA 289
|
Length = 412 |
| >gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 277 bits (710), Expect = 1e-90
Identities = 133/310 (42%), Positives = 192/310 (61%), Gaps = 26/310 (8%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
++RVVVTGIGM+ LG E++++ + GECGI++IT FD
Sbjct: 1 MKRVVVTGIGMINSLGLNKESSFKAICNGECGIKKIT-------LFDAS-------DFPV 46
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
++A + +F+ ++ K+ + RFI L AA EA+ DA +LP + ER
Sbjct: 47 QIAGEIT------DFDPTEVMDPKEVKKADRFIQLGLKAAREAMKDAGFLPEEL-DAERF 99
Query: 158 GVSIGGGIGSISDTVDAAQMICEKR-LRRLSPFFIPRILINMASGHVSMKYGFQGPNHAA 216
GVS GIG + ++ +IC ++ R++SPFFIP L+NM G +S+++G +GPN ++
Sbjct: 100 GVSSASGIGGLP-NIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSS 158
Query: 217 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276
VTACA G H+I +A + I G +D M+ G ES+I + + GF +AL+T+ N P++A
Sbjct: 159 VTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTR-NDDPKKA 217
Query: 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKG 336
SRPFD RDGFV+GEG+G LVLEE E AKKRGAKIYAE+ G+G SGDA+HIT P + G
Sbjct: 218 SRPFDKDRDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAPE--G 275
Query: 337 AILAMTRALK 346
+ AM AL+
Sbjct: 276 PLRAMKAALE 285
|
Length = 406 |
| >gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 268 bits (687), Expect = 3e-87
Identities = 141/308 (45%), Positives = 198/308 (64%), Gaps = 22/308 (7%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+GM++P+G E++W+ L+ G+ GI I E NF +++
Sbjct: 4 RRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNI--EHFDTTNF------------STR 49
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
A +V +FN + +++ KD R + FI Y + A +AL D+ L + R G
Sbjct: 50 FAGLVK------DFNCEEYMSKKDARKMDLFIQYGIAAGIQALDDSG-LEVTEENAHRIG 102
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V+IG GIG + Q + EK R++SPFF+P ++NM +G++S+ G +GPN A T
Sbjct: 103 VAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAIST 162
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
AC TG H+IG AARMI +GD+D MVAGG E + L MAGF ++AL+T+ N PQ+ASR
Sbjct: 163 ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKASR 221
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
P+D RDGFV+G+G+G++VLEE EHAK RGAKIYAE+ G+GMSGDA+H+T P DG G
Sbjct: 222 PWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGA 281
Query: 339 LAMTRALK 346
LAM A++
Sbjct: 282 LAMEAAMR 289
|
Length = 414 |
| >gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Score = 222 bits (568), Expect = 4e-68
Identities = 124/319 (38%), Positives = 183/319 (57%), Gaps = 30/319 (9%)
Query: 34 PLSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFG 93
PL+ RRVVVTG+G+V+PLG + + L+ G GI EI D
Sbjct: 124 PLTKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFDCS-------------- 169
Query: 94 QLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPS--DQ 151
Q +++A + F+ D W+ K + + +F+ Y L A +AL D +
Sbjct: 170 QFPTRIAGEIK------SFSTDGWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKE 223
Query: 152 GQKERTGVSIG---GGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208
K + GV IG GG+ +D ++A ++ R+++PF +P NM S ++M G
Sbjct: 224 LDKTKCGVLIGSAMGGMKVFNDAIEALRI----SYRKMNPFCVPFATTNMGSAMLAMDLG 279
Query: 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK 268
+ GPN++ TACAT I +AA I G++DVM+ GG++++I + + GF RAL+ +
Sbjct: 280 WMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQR 339
Query: 269 YNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHIT 328
N P +ASRP+D RDGFV+GEG+GVL+LEELEHAKKRGA IYAE G + DA+H+T
Sbjct: 340 -NDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMT 398
Query: 329 QPHIDGKGAILAMTRALKQ 347
+PH +G G IL + +AL Q
Sbjct: 399 EPHPEGAGVILCIEKALAQ 417
|
Length = 540 |
| >gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Score = 207 bits (528), Expect = 2e-64
Identities = 103/195 (52%), Positives = 137/195 (70%)
Query: 153 QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGP 212
++ERT IG GIG A + + +RLSPF +P L+N+A+GHVS+K+ F+GP
Sbjct: 24 KQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGP 83
Query: 213 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 272
A VTACA G +IGDA RMI+ ++DV + GG E+ ID +S+AGF +RAL+T +N T
Sbjct: 84 IGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNST 143
Query: 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 332
P++ASRPFD RDGFV+GEG+G+L++EELEHA RGAK AE+ GYG S DA+H+T
Sbjct: 144 PEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAE 203
Query: 333 DGKGAILAMTRALKQ 347
DG GA AM AL+Q
Sbjct: 204 DGDGAYRAMKIALRQ 218
|
Length = 342 |
| >gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 202 bits (516), Expect = 1e-61
Identities = 114/321 (35%), Positives = 169/321 (52%), Gaps = 34/321 (10%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
+RRVV+TG+G+V+ +G + L G GI +PE +MG + +G +
Sbjct: 1 MRRVVITGLGIVSSIGNNQQEVLASLREGRSGIT-FSPEFAEMG-----MRSQVWGNVKL 54
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFI----AYALCAADEALHDAKWLPSDQGQ 153
++ R + RF+ AYA A ++A+ DA L +Q
Sbjct: 55 DPTGLI-------------------DRKVMRFMGDASAYAYLAMEQAIADAG-LSEEQVS 94
Query: 154 KERTGVSIGGGIGSISDTVDAAQ-MICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGP 212
RTG+ G G GS + V+AA M + +R+ P+ + + + + S ++ + +G
Sbjct: 95 NPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGV 154
Query: 213 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 272
N++ +ACAT AH IG+A IQ G D++ AGG E +S F AL+TKYN T
Sbjct: 155 NYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCL-FDAMGALSTKYNDT 213
Query: 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 332
P++ASR +D RDGFVI G GV+V+EELEHA RGAKIYAE+ GYG + D + + P
Sbjct: 214 PEKASRAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP-- 271
Query: 333 DGKGAILAMTRALKQVVHNVD 353
G+GA+ M AL V +D
Sbjct: 272 SGEGAVRCMQMALATVDTPID 292
|
Length = 406 |
| >gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 190 bits (485), Expect = 6e-57
Identities = 102/305 (33%), Positives = 152/305 (49%), Gaps = 22/305 (7%)
Query: 41 VVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVA 100
VVVTGI M T L AETTW+ L+ G+ GIR + +D + FD ++ G L
Sbjct: 14 VVVTGIAMTTALATDAETTWKLLLDGQSGIRTL--DDPFVEEFDLPVRIG--GHLLE--- 66
Query: 101 AVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVS 160
D L + R ++ + +A S + R VS
Sbjct: 67 ------------EFDHQLTRVELRRMSYLQRMSTVLGRRVWENAG---SPEVDTNRLMVS 111
Query: 161 IGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTAC 220
IG G+GS + V A + + LR +SP + + N + V ++ + V+AC
Sbjct: 112 IGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSAC 171
Query: 221 ATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPF 280
A+G+ +I A R I G++D+ + GG E+ I+A+ +AGF + R + + N P A RPF
Sbjct: 172 ASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPF 231
Query: 281 DCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILA 340
D RDGFV GEG ++V+E EHAK RGA I A + G ++ D H+ P +G+ A A
Sbjct: 232 DKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHA 291
Query: 341 MTRAL 345
MTRA+
Sbjct: 292 MTRAI 296
|
Length = 418 |
| >gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 2e-56
Identities = 82/270 (30%), Positives = 120/270 (44%), Gaps = 32/270 (11%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
V +TG+G P G G E W L+ G IRE + + S+
Sbjct: 2 EPVAITGMGCRFPGGVGPEEFWELLLAGRDAIREFPADLSGL-------------YPPSR 48
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIA---RFIAYALCAADEALHDAKWLPSDQGQKE 155
VA + F+ D+ R AL AA EAL DA P+ +
Sbjct: 49 VAGEIYG------FDFDAAFFGISPREAEAMDPQQRLALEAAWEALEDAGLDPASLRGSD 102
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHA 215
RTGV +G G G D + + RR+SP+ + ++A+G +S + G +GP+
Sbjct: 103 RTGVFVGSGSG---DYAELQALDSAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVT 159
Query: 216 AVTACATGAHSIGDAA-RMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274
TAC++ AA R I+ G+ D+ +AGG E+ + AGF + AL + P
Sbjct: 160 VDTACSSS-LVALHAAVRSIRRGECDLALAGGVEAPLTPGGFAGFSAAGALLSPDG--PC 216
Query: 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHA 304
+A PF DGFV GEG G ++L+EL A
Sbjct: 217 KAFDPFA---DGFVRGEGVGAVLLKELSEA 243
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243 |
| >gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 1e-55
Identities = 107/316 (33%), Positives = 151/316 (47%), Gaps = 37/316 (11%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+G VT LG +T RL G +R +M +DR L+ +
Sbjct: 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVR-------RMPEWDRYDGLNT------R 48
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
+AA + +F + K RS+ R A A++ AL DA L R G
Sbjct: 49 LAAPID------DFELPAHYTRKKIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMG 102
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
++ G GS M+ E + ++ R++ + + +V + +G +G +
Sbjct: 103 IAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIPTSS 162
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRAL-------TTKYNG 271
AC +G+ IG A I++G VM+AGG E C + A T+ N
Sbjct: 163 ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE---------LCPTEAAVFDTLFATSTRND 213
Query: 272 TPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH 331
P+ RPFD RDG VIGEG+G LVLEELEHAK RGA IYAE+ G+G + D H+TQP
Sbjct: 214 APELTPRPFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQ 273
Query: 332 IDGKGAILAMTRALKQ 347
+ +AM ALK
Sbjct: 274 AETMQ--IAMELALKD 287
|
Length = 405 |
| >gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Score = 166 bits (421), Expect = 1e-47
Identities = 100/321 (31%), Positives = 143/321 (44%), Gaps = 35/321 (10%)
Query: 39 RRVVVTGIGMVTPLGCGAETT---WRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQL 95
RVV+TGIG+V+P G G + W L G GI + +
Sbjct: 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLKSRF--------------- 45
Query: 96 TSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKE 155
VA +P G G +K + R AL A +EAL DA +
Sbjct: 46 DRGVAGQIPTGDIPGWD-------AKRTGIVDRTTLLALVATEEALADAGITDPYEVHPS 98
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR--ILINMASGHVSMKYGF-QGP 212
GV +G G+G + + + R ++P+ P+ + N +G V++ GP
Sbjct: 99 EVGVVVGSGMGGL----RFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLSSHGP 154
Query: 213 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 272
V ACAT ++ A I+ G +D++V GG E ++ ++GF AL+T
Sbjct: 155 IKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPLE-EGLSGFANMGALSTAEEE- 212
Query: 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 332
P+E SRPFD RDGFV EG+GVLVLE E A RGA IY V G + D + P
Sbjct: 213 PEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVP-A 271
Query: 333 DGKGAILAMTRALKQVVHNVD 353
GKG A+ AL + ++D
Sbjct: 272 GGKGIARAIRTALAKAGLSLD 292
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407 |
| >gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 3e-38
Identities = 98/320 (30%), Positives = 141/320 (44%), Gaps = 48/320 (15%)
Query: 41 VVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVA 100
V VTG+G+VT LG G W L GE GI IT F E L +++A
Sbjct: 13 VAVTGMGVVTSLGQGKADNWAALTAGESGIHTIT-------RFPTEG-------LRTRIA 58
Query: 101 AVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQG-------- 152
V +F +S + A A A AA+EAL A D
Sbjct: 59 GTV-------DFLPESPFGA-----SALSEALARLAAEEALAQAGIGKGDFPGPLFLAAP 106
Query: 153 -------QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 205
+ ++G +D +++ R R R + ++
Sbjct: 107 PVELEWPARFALAAAVGD-----NDAPSYDRLLRAARGGRFDALH-ERFQFGSIADRLAD 160
Query: 206 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRAL 265
++G +G + TACA+GA +I I+ G++D + T+ S+ A ++ F AL
Sbjct: 161 RFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSAL 220
Query: 266 TTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH 325
+T+ N P++AS+PF RDGFV+ EG+G LVLE LE A RGAKI V G G D+
Sbjct: 221 STQ-NDPPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSF 279
Query: 326 HITQPHIDGKGAILAMTRAL 345
H T+ DG AI A+ AL
Sbjct: 280 HRTRSSPDGSPAIGAIRAAL 299
|
Length = 425 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 137 bits (346), Expect = 5e-37
Identities = 61/154 (39%), Positives = 91/154 (59%), Gaps = 7/154 (4%)
Query: 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 253
L + A+ + + G QGP A + ACATG +I +IQ G ++AG E+ I
Sbjct: 120 TLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITP 179
Query: 254 LSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYA 313
L++AGF + AL + + PFD R+G V+GEG +LVLE E A+KRGAKIY
Sbjct: 180 LTLAGFQQMGALA-------KTGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYG 232
Query: 314 EVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347
++ G+G++ DA+H++ P DGK AI A+ + L +
Sbjct: 233 QILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLAR 266
|
Length = 381 |
| >gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Score = 129 bits (325), Expect = 6e-34
Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RR VVTGIG+V P G G E W+ ++ G G+ IT D ++
Sbjct: 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFDP--------------SGYPAR 46
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
+A VP + E L D R AL AAD AL DA P+ + G
Sbjct: 47 LAGEVP-DFDAAEHLPGRLLPQTD-----RMTRLALAAADWALADAGVDPAALPPYDM-G 99
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V G Q + K R +S + + +G +S+++G +GP+ V
Sbjct: 100 VVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVA 159
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
A G ++ A R+++ G + ++V+GG +S++ S L+T + P A
Sbjct: 160 EQAGGLDALAQARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAYL 216
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGD 323
PFD G+V GEG +LVLE+ A++RGA++Y E+ GY + D
Sbjct: 217 PFDAAAAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFD 261
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399 |
| >gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Score = 122 bits (307), Expect = 3e-31
Identities = 85/317 (26%), Positives = 132/317 (41%), Gaps = 35/317 (11%)
Query: 40 RVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKV 99
VVVTG+G+V+ +G G + L+ G M R+ A L S
Sbjct: 3 EVVVTGVGVVSAIGQGRPSFAAALLAGRHAFG-------VMRRPGRQVPDDAGAGLASAF 55
Query: 100 AAVVPCGISSGEFNEDSWLNSKDHRSIARFIAY----ALCAADEALHDAKWLPSDQGQKE 155
E + + D + R + AL AA EA DA P D +
Sbjct: 56 IG--------AELDSLALPERLD-AKLLRRASLSAQAALAAAREAWRDAALGPVD---PD 103
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR-ILINMASGHV---SMKYGFQG 211
R G+ +GG + + R F P L M + V S ++G +G
Sbjct: 104 RIGLVVGGSNLQQREQALVHE-----TYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG 158
Query: 212 PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRAL-TTKYN 270
A A+G ++ AAR++Q G D +A G + A+ + ++
Sbjct: 159 EGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFA 218
Query: 271 GTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQP 330
P+ A RPFD RDGF+ GE G +VLE E A++RGA+ YA++ G+ M DA+ P
Sbjct: 219 DEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDP 278
Query: 331 HIDGKGAILAMTRALKQ 347
++G+ + AL++
Sbjct: 279 SLEGEMR--VIRAALRR 293
|
Length = 410 |
| >gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 3e-28
Identities = 71/221 (32%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLS 187
AA+ A+ DA L + + GV +G G GS Q+ +R +
Sbjct: 10 YVSILGFEAAERAIADAG-LSREYQKNPIVGVVVGTGGGS-----PRFQVFGADAMRAVG 63
Query: 188 PFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT 247
P+ + + + ASG ++ G GP + ACA H++ AA +Q G D+++AGG+
Sbjct: 64 PYVVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGS 123
Query: 248 ESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKR 307
E A M + + TP++ASR FD DGFV G+G+G LV+EELEHA R
Sbjct: 124 E--ELAAPMDCEFDAMGALS----TPEKASRTFDAAADGFVFGDGAGALVVEELEHALAR 177
Query: 308 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQV 348
GA IYAE+ G + D + +G A AL
Sbjct: 178 GAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVA 218
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332 |
| >gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 5e-28
Identities = 71/314 (22%), Positives = 121/314 (38%), Gaps = 30/314 (9%)
Query: 40 RVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKV 99
+ + G+ P + W L+ G I EI + + G+ ++
Sbjct: 2 PIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPED--RWDADGYYPDPGKPGKTYTRR 59
Query: 100 AAVVPCGISSGEFNEDSWLNSKDHRSIARFI----AYALCAADEALHDAKWLPSDQGQKE 155
+ + + A + L A EAL DA + P +
Sbjct: 60 GGFLD------DVDAFDAAFFGISPREAEAMDPQQRLLLEVAWEALEDAGYSP-ESLAGS 112
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHA 215
RTGV +G S SD + + + + + +S + +GP+
Sbjct: 113 RTGVFVGA---SSSDY----LELLARDPDEIDAYAATGTSRAFLANRISYFFDLRGPSLT 165
Query: 216 AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275
TAC++ ++ A + ++ G+ D+ + GG + GF K+ L+ P
Sbjct: 166 VDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS------PDG 219
Query: 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--GDAHHITQPHID 333
RPFD DG+V GEG GV+VL+ L A + G +IYA +RG ++ G IT P
Sbjct: 220 RCRPFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPS-- 277
Query: 334 GKGAILAMTRALKQ 347
G+ + RA +
Sbjct: 278 GEAQAALIRRAYAR 291
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421 |
| >gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Score = 96.4 bits (241), Expect = 2e-22
Identities = 80/331 (24%), Positives = 123/331 (37%), Gaps = 86/331 (25%)
Query: 41 VVVTGIGMVTPLGCGAETTWRRLIVGEC-GIREITPEDLKMGNFDRETQLHAFGQLTSKV 99
V ++ G + LG G + L G G+R P D D T G++
Sbjct: 4 VYISAFGATSALGRGLDAILAALRAGRASGMR---PCD--FWLVDLPT---WVGEVVGVE 55
Query: 100 AAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAA---DEALHDAKWLPSDQGQKER 156
+P +++ + +++R AL A + A+ A + +R
Sbjct: 56 LPALPAALAA--------FDCRNNR-------LALLALQQIEPAVEAAI----ARYGADR 96
Query: 157 TGVSIGGGIGSISDTVDAAQMICEKRLRRLSP--------FFIPRILINMASGHVSMKYG 208
GV +G I + E RR P + + + + + G
Sbjct: 97 IGVVLGTSTSGILEG--------ELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLG 148
Query: 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES----------SIDALSMAG 258
GP + TAC++ A A R+++ G D + GG +S S+++LS
Sbjct: 149 LSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLS-PQ 207
Query: 259 FCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVR-- 316
C RPF RDG IGE + +LE R A V
Sbjct: 208 PC-----------------RPFSANRDGINIGEAAAFFLLE-------REDD--AAVALL 241
Query: 317 GYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347
G G S DAHH++ PH +G GAILAM +AL
Sbjct: 242 GVGESSDAHHMSAPHPEGLGAILAMQQALAD 272
|
Length = 392 |
| >gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 5e-15
Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 39/314 (12%)
Query: 48 MVTPLGC---GA---ETTWRRLIVGECGIREITPEDLKM-GNFDRETQLHAFGQLTSKVA 100
+ + C GA E W L G I E+ + + +D + G+ S+
Sbjct: 7 AIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDP--TVPGKSYSRWG 64
Query: 101 AVVPC--GISSGEFNEDSWLNSKDHRSI---ARFIAYALCAADEALHDAKWLPSDQGQKE 155
+ + F ++ ++ ++ R + L A EAL DA P D +
Sbjct: 65 GFLDDVDDFDALFFG----ISPREAEAMDPQQRLL---LEVAWEALEDAGIYP-DSLRGS 116
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHA 215
TGV G + + A + I ++A+G +S G GP+
Sbjct: 117 ATGVFAGASVADYLLLLLAD-------DEAEPEYAITGNSSSVAAGRISYVLGLSGPSVT 169
Query: 216 AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275
TAC++ ++ A + ++ G+ D+ +AGG + S F L+ P
Sbjct: 170 VDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS------PDG 223
Query: 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHID 333
+ FD DG+V GEG+GV+VL+ L A++ G +IYA +RG ++ D +T P +
Sbjct: 224 RCKAFDADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAP--N 281
Query: 334 GKGAILAMTRALKQ 347
+ + AL
Sbjct: 282 LEAQADVIREALAD 295
|
Length = 1061 |
| >gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Score = 76.2 bits (187), Expect = 7e-15
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 133 ALCAADEALHDAKWLPSDQGQKERTGVSIG-GGIGSISDTVDA----------------- 174
+L A E L+DA LP +++ G+++G GG S +++A
Sbjct: 97 SLVVAKEVLNDAG-LPDGY-DRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVE 154
Query: 175 ---AQMICEKRLRRLSPF---FIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIG 228
++M+ +K + + P L N+ SG ++ ++ G N ACA +I
Sbjct: 155 DEDSEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIR 214
Query: 229 DAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288
A + G S++M+ GG + F K+ A TT E +PFD G +
Sbjct: 215 MALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTT------NEDIQPFDIDSKGMM 268
Query: 289 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHIDGKGAILAMTRA 344
IGEG G++ L+ LE A++ G +IYA ++G G S D I P +G+ A+ RA
Sbjct: 269 IGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAK--ALKRA 324
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582 |
| >gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Score = 68.5 bits (169), Expect = 5e-13
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TAC++ ++ A + ++ G+ D+ +AGG + + G ++ L+ P
Sbjct: 95 TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGLSRAGMLS------PDGRC 148
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHHITQPHIDG 334
+ FD DG+V GEG GV+VL+ L A + G I A +RG + G ++ IT P
Sbjct: 149 KTFDASADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGITAPSGPA 207
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298 |
| >gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 1e-11
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 41/152 (26%)
Query: 199 ASGHVSMKYGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 257
A+G ++ G GP ++ ACATG ++ A + +Q G +D+++AGG+E
Sbjct: 46 AAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------- 97
Query: 258 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 317
FV G+G+ V+E EHA +RGA AE+
Sbjct: 98 -----------------------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVS 128
Query: 318 YGMSGD-AHHITQPHIDGKGAILAMTRALKQV 348
+ D A + G+G A +AL+
Sbjct: 129 TAATFDGASMVPAV--SGEGLARAARKALEGA 158
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254 |
| >gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Score = 48.6 bits (117), Expect = 2e-06
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
C +G ++ AA+ I G++DV+VAGG ES +S A + +A G
Sbjct: 83 VCGSGLQAVALAAQSIAAGEADVVVAGGVES----MSRAPYLLPKARRGGRLGLNTLDGM 138
Query: 279 PFDCGRDGFV 288
D D F
Sbjct: 139 LDDGLTDPFT 148
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386 |
| >gnl|CDD|235715 PRK06147, PRK06147, 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 53/283 (18%), Positives = 86/283 (30%), Gaps = 68/283 (24%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
R + + G GMVT +G A ++ + + NF ET+
Sbjct: 3 RALAIVGSGMVTAVGLDAPSSCAAI---RARLD----------NFQ-ETRFIDPPGGEWL 48
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKER-T 157
+ A VP W R R A A EAL D +
Sbjct: 49 IGAPVPL--------PPPW------RGPERLAEMAAPAIAEALEGLP--ALDASEAPLLL 92
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
V+ G D + + + RL P + +A G VS
Sbjct: 93 CVAEEERPGR---PPDLEERLLRELEARLGLRLEPGSAV-IARGRVSG------------ 136
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
A ++ A R+I G ++ G +S + ++A + L T N
Sbjct: 137 ------AVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS------ 184
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM 320
+GF+ GE + ++L + G + G G
Sbjct: 185 -------NGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LGLGR 218
|
Length = 348 |
| >gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 43/155 (27%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 173 DAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG-------FQGPNHAAVTACATGAH 225
D ++ E+ + L P L N+ +G++S+ + F G A V+A
Sbjct: 128 DRGVLLNERLMTELRPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEI--- 184
Query: 226 SIGDAARMIQFGDSDVMVAGGTES--SIDAL---SMAGFCKSRALTTKYNGTPQEASRPF 280
A I G SD + GG + D L + G L + P +
Sbjct: 185 ----AFARIASGQSDHALVGGAYNAERPDMLLLYELGGLL----LKGGW--APVWSRGGE 234
Query: 281 DCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEV 315
D G GF++G G LVLE EHA+ RGA+ YA +
Sbjct: 235 DGG--GFILGSGGAFLVLESREHAEARGARPYARI 267
|
Length = 398 |
| >gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 9e-05
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C +G ++ AA+ I+ GD+D++VAGG ES
Sbjct: 88 CGSGLKAVALAAQAIRAGDADIVVAGGQES 117
|
Length = 393 |
| >gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 2e-04
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 40 RVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITP 75
+VVVTGIG+V+ LG E +W+RL+ G+ GI+ P
Sbjct: 3 KVVVTGIGLVSALG-DLEQSWQRLLQGKSGIKLHQP 37
|
Length = 381 |
| >gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 2e-04
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Query: 312 YAEVRGYGMSGD-AHHITQPHIDGKGAILAMTRALKQ 347
YA +RG ++ D A H +G A+ AL
Sbjct: 1 YAVIRGSAVNQDGAAHNGLTAPNGPAQARAIRAALAD 37
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119 |
| >gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 3e-04
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
CA+G ++ AA I+ G++DVM+A G ES
Sbjct: 95 CASGLQAVAMAADRIRVGEADVMIAAGVES 124
|
Length = 399 |
| >gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 15/32 (46%), Positives = 24/32 (75%)
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESS 250
CA+G ++ AA++I+ G++DV+VAGG ES
Sbjct: 82 QCASGLQAVILAAQLIRAGEADVVVAGGVESM 113
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386 |
| >gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 4e-04
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 202 HVSMKYGFQGPNH-AAVT---ACATGAHSIGDAARMIQFGDSDVMVAGGTES 249
++K G P+ AVT C +G ++ AA+ I+ GD+D++VAGG ES
Sbjct: 66 QAALKAGI--PDSVPAVTINKVCGSGLKAVALAAQAIRAGDADIVVAGGVES 115
|
Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262 |
| >gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.002
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA 253
ACA+G ++ AA+ I G++DV++AGG E DA
Sbjct: 91 ACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDA 125
|
Length = 392 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| KOG1394 | 440 | consensus 3-oxoacyl-(acyl-carrier-protein) synthas | 100.0 | |
| PRK08722 | 414 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PLN02787 | 540 | 3-oxoacyl-[acyl-carrier-protein] synthase II | 100.0 | |
| PRK06333 | 424 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG0304 | 412 | FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li | 100.0 | |
| PLN02836 | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase | 100.0 | |
| PRK09116 | 405 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| cd00832 | 399 | CLF Chain-length factor (CLF) is a factor required | 100.0 | |
| PRK07314 | 411 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK07967 | 406 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PRK07910 | 418 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK08439 | 406 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| TIGR03150 | 407 | fabF beta-ketoacyl-acyl-carrier-protein synthase I | 100.0 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 100.0 | |
| PRK07103 | 410 | polyketide beta-ketoacyl:acyl carrier protein synt | 100.0 | |
| cd00834 | 406 | KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) | 100.0 | |
| PRK05952 | 381 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PTZ00050 | 421 | 3-oxoacyl-acyl carrier protein synthase; Provision | 100.0 | |
| cd00828 | 407 | elong_cond_enzymes "elongating" condensing enzymes | 100.0 | |
| PRK06519 | 398 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| COG3321 | 1061 | Polyketide synthase modules and related proteins [ | 100.0 | |
| cd00833 | 421 | PKS polyketide synthases (PKSs) polymerize simple | 100.0 | |
| smart00825 | 424 | PKS_KS Beta-ketoacyl synthase. The structure of be | 100.0 | |
| PRK06501 | 425 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 100.0 | |
| PRK14691 | 342 | 3-oxoacyl-(acyl carrier protein) synthase II; Prov | 100.0 | |
| PRK09185 | 392 | 3-oxoacyl-(acyl carrier protein) synthase I; Revie | 100.0 | |
| PF00109 | 254 | ketoacyl-synt: Beta-ketoacyl synthase, N-terminal | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| PRK06147 | 348 | 3-oxoacyl-(acyl carrier protein) synthase; Validat | 100.0 | |
| cd00825 | 332 | decarbox_cond_enzymes decarboxylating condensing e | 99.96 | |
| cd00327 | 254 | cond_enzymes Condensing enzymes; Family of enzymes | 99.88 | |
| PRK05656 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.83 | |
| PRK07108 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.82 | |
| PRK06064 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.82 | |
| cd00751 | 386 | thiolase Thiolase are ubiquitous enzymes that cata | 99.8 | |
| PRK09051 | 394 | beta-ketothiolase; Provisional | 99.8 | |
| PRK12578 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.8 | |
| PRK06633 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.8 | |
| PRK07515 | 372 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.8 | |
| cd00829 | 375 | SCP-x_thiolase Thiolase domain associated with ste | 99.8 | |
| PRK07661 | 391 | acetyl-CoA acetyltransferase; Provisional | 99.79 | |
| PRK09052 | 399 | acetyl-CoA acetyltransferase; Provisional | 99.78 | |
| PRK13359 | 400 | beta-ketoadipyl CoA thiolase; Provisional | 99.78 | |
| PRK06205 | 404 | acetyl-CoA acetyltransferase; Provisional | 99.78 | |
| PRK08131 | 401 | acetyl-CoA acetyltransferase; Provisional | 99.78 | |
| COG0332 | 323 | FabH 3-oxoacyl-[acyl-carrier-protein] | 99.78 | |
| TIGR01930 | 386 | AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi | 99.78 | |
| PLN02287 | 452 | 3-ketoacyl-CoA thiolase | 99.77 | |
| PRK06445 | 394 | acetyl-CoA acetyltransferase; Provisional | 99.77 | |
| PRK08242 | 402 | acetyl-CoA acetyltransferase; Validated | 99.77 | |
| PRK05790 | 393 | putative acyltransferase; Provisional | 99.76 | |
| PRK07850 | 387 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| TIGR02430 | 400 | pcaF beta-ketoadipyl CoA thiolase. Members of this | 99.76 | |
| TIGR02445 | 385 | fadA fatty oxidation complex, beta subunit FadA. T | 99.76 | |
| PRK07851 | 406 | acetyl-CoA acetyltransferase; Provisional | 99.76 | |
| PRK09050 | 401 | beta-ketoadipyl CoA thiolase; Validated | 99.75 | |
| PRK07516 | 389 | acetyl-CoA acetyltransferase; Provisional | 99.75 | |
| PRK06366 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.75 | |
| PRK08313 | 386 | acetyl-CoA acetyltransferase; Provisional | 99.74 | |
| PRK06158 | 384 | thiolase; Provisional | 99.74 | |
| PRK08235 | 393 | acetyl-CoA acetyltransferase; Provisional | 99.74 | |
| PRK08256 | 391 | lipid-transfer protein; Provisional | 99.74 | |
| PLN02644 | 394 | acetyl-CoA C-acetyltransferase | 99.74 | |
| PRK06954 | 397 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK08170 | 426 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK06065 | 392 | acetyl-CoA acetyltransferase; Provisional | 99.73 | |
| PRK08947 | 387 | fadA 3-ketoacyl-CoA thiolase; Reviewed | 99.73 | |
| PRK06059 | 399 | lipid-transfer protein; Provisional | 99.73 | |
| PRK09352 | 319 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.72 | |
| PRK07204 | 329 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.72 | |
| PRK08963 | 428 | fadI 3-ketoacyl-CoA thiolase; Reviewed | 99.72 | |
| PRK08142 | 388 | acetyl-CoA acetyltransferase; Provisional | 99.71 | |
| PTZ00455 | 438 | 3-ketoacyl-CoA thiolase; Provisional | 99.71 | |
| PRK06289 | 403 | acetyl-CoA acetyltransferase; Provisional | 99.71 | |
| PRK06816 | 378 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.71 | |
| PRK06365 | 430 | acetyl-CoA acetyltransferase; Provisional | 99.7 | |
| PRK06157 | 398 | acetyl-CoA acetyltransferase; Validated | 99.7 | |
| TIGR02446 | 430 | FadI fatty oxidation complex, beta subunit FadI. T | 99.68 | |
| PRK06504 | 390 | acetyl-CoA acetyltransferase; Provisional | 99.68 | |
| PRK09258 | 338 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.67 | |
| PRK07801 | 382 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| PRK06690 | 361 | acetyl-CoA acetyltransferase; Provisional | 99.67 | |
| TIGR00747 | 318 | fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | 99.66 | |
| cd00826 | 393 | nondecarbox_cond_enzymes nondecarboxylating conden | 99.65 | |
| PRK09268 | 427 | acetyl-CoA acetyltransferase; Provisional | 99.65 | |
| PRK12879 | 325 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.64 | |
| KOG1390 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.64 | |
| cd00830 | 320 | KAS_III Ketoacyl-acyl carrier protein synthase III | 99.64 | |
| PRK06025 | 417 | acetyl-CoA acetyltransferase; Provisional | 99.63 | |
| PRK07855 | 386 | lipid-transfer protein; Provisional | 99.62 | |
| PRK06066 | 385 | acetyl-CoA acetyltransferase; Provisional | 99.61 | |
| PLN02326 | 379 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 99.59 | |
| CHL00203 | 326 | fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr | 99.58 | |
| PRK06840 | 339 | hypothetical protein; Validated | 99.56 | |
| cd00827 | 324 | init_cond_enzymes "initiating" condensing enzymes | 99.54 | |
| KOG1406 | 408 | consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44 | 99.5 | |
| PRK07937 | 352 | lipid-transfer protein; Provisional | 99.5 | |
| PRK08257 | 498 | acetyl-CoA acetyltransferase; Validated | 99.5 | |
| TIGR00748 | 345 | HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase | 99.49 | |
| PRK05963 | 326 | 3-oxoacyl-(acyl carrier protein) synthase II; Revi | 99.47 | |
| PRK04262 | 347 | hypothetical protein; Provisional | 99.47 | |
| TIGR02845 | 327 | spore_V_AD stage V sporulation protein AD. Bacillu | 99.47 | |
| PRK12880 | 353 | 3-oxoacyl-(acyl carrier protein) synthase III; Rev | 99.43 | |
| KOG1391 | 396 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 99.41 | |
| PLN03169 | 391 | chalcone synthase family protein; Provisional | 99.41 | |
| PLN03172 | 393 | chalcone synthase family protein; Provisional | 99.37 | |
| cd00831 | 361 | CHS_like Chalcone and stilbene synthases; plant-sp | 99.36 | |
| PLN03171 | 399 | chalcone synthase-like protein; Provisional | 99.35 | |
| PLN03170 | 401 | chalcone synthase; Provisional | 99.31 | |
| KOG1389 | 435 | consensus 3-oxoacyl CoA thiolase [Lipid transport | 99.3 | |
| PLN03173 | 391 | chalcone synthase; Provisional | 99.3 | |
| PRK08304 | 337 | stage V sporulation protein AD; Validated | 99.29 | |
| TIGR01835 | 379 | HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt | 99.19 | |
| PRK12404 | 334 | stage V sporulation protein AD; Provisional | 99.19 | |
| PF13723 | 218 | Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina | 99.19 | |
| PLN03168 | 389 | chalcone synthase; Provisional | 99.18 | |
| PLN02577 | 459 | hydroxymethylglutaryl-CoA synthase | 99.15 | |
| PLN02854 | 521 | 3-ketoacyl-CoA synthase | 99.09 | |
| COG3425 | 377 | PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi | 98.96 | |
| KOG1392 | 465 | consensus Acetyl-CoA acetyltransferase [Lipid tran | 98.95 | |
| PLN02192 | 511 | 3-ketoacyl-CoA synthase | 98.91 | |
| PLN02932 | 478 | 3-ketoacyl-CoA synthase | 98.9 | |
| PF00108 | 264 | Thiolase_N: Thiolase, N-terminal domain; InterPro: | 98.84 | |
| PLN02377 | 502 | 3-ketoacyl-CoA synthase | 98.82 | |
| TIGR01833 | 454 | HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth | 98.75 | |
| PF08392 | 290 | FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- | 98.75 | |
| COG0183 | 392 | PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis | 98.74 | |
| COG3424 | 356 | BcsA Predicted naringenin-chalcone synthase [Secon | 98.49 | |
| PF02801 | 119 | Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina | 98.48 | |
| PLN00415 | 466 | 3-ketoacyl-CoA synthase | 98.43 | |
| PF08545 | 80 | ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) | 98.42 | |
| PF00195 | 226 | Chal_sti_synt_N: Chalcone and stilbene synthases, | 98.27 | |
| PF07451 | 329 | SpoVAD: Stage V sporulation protein AD (SpoVAD); I | 98.15 | |
| PF01154 | 174 | HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s | 97.45 | |
| PF02803 | 123 | Thiolase_C: Thiolase, C-terminal domain; InterPro: | 97.3 | |
| KOG1393 | 462 | consensus Hydroxymethylglutaryl-CoA synthase [Lipi | 91.33 |
| >KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-65 Score=452.35 Aligned_cols=303 Identities=55% Similarity=0.920 Sum_probs=291.2
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|+||||||||+++|+|.++.++|++|.+|+++|+.+..++ ...+|+.+++.|+. |+...|
T Consensus 23 ~rRVVITGmG~VTplG~~v~~~w~~Ll~GesGI~~l~~~d--------------~k~~p~~v~g~Ip~------f~~e~~ 82 (440)
T KOG1394|consen 23 MRRVVITGMGAVTPLGNGVHTSWRNLLSGESGISSLEGPD--------------YKSIPFTVAGKIPR------FSVEDY 82 (440)
T ss_pred ceeEEEeccceeecCCCChHHHHHHhhccccCcccccccc--------------cccCcchheeeccc------cccccc
Confidence 7899999999999999999999999999999999999876 56788889999997 999999
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCC--CCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPS--DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~--~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (361)
++..+.++|+.+.+|++.++.+||+|++|.+. +..+..++||.+|++.|++..+.+..+.+.+.++++++|+.++..+
T Consensus 83 ~s~~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil 162 (440)
T KOG1394|consen 83 VSKGDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKIL 162 (440)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhh
Confidence 99999999999999999999999999999766 3335889999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCC
Q 018076 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (361)
Q Consensus 196 ~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 275 (361)
.|+.+++|++.+|++||+++++++|++|..+|..|.+.|+.|++|++|+||.|..++|..+.+|.+.++|+++ +++|..
T Consensus 163 ~NM~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~-nd~P~~ 241 (440)
T KOG1394|consen 163 TNMAAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTR-NDNPQK 241 (440)
T ss_pred cccccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhc-CCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999997 889999
Q ss_pred CCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 276 ~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
.+||||.++||||+|||++++|||+.|||++||++||++|.|++.++|++|++.|+|+|.+...||++||++|||.|+||
T Consensus 242 aSRPfD~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~i 321 (440)
T KOG1394|consen 242 ASRPFDKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDGAGAVLAMERALKDAGLSPEDI 321 (440)
T ss_pred cCCCCccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCcchHHHHHHHHHHHcCCChhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
|||.-|
T Consensus 322 ~YvNAH 327 (440)
T KOG1394|consen 322 DYVNAH 327 (440)
T ss_pred Ceeecc
Confidence 999643
|
|
| >PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=432.62 Aligned_cols=302 Identities=46% Similarity=0.793 Sum_probs=279.6
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.++|+|||+|+++|.|.+.++||++|++|+++|.+++.++ ...++..+++.+++ ||+..|
T Consensus 3 ~~~VvItG~g~~~p~g~~~~~~w~~L~~g~s~i~~~~~~~--------------~~~~~~~~~g~i~~------~~~~~~ 62 (414)
T PRK08722 3 KRRVVVTGMGMLSPVGNTVESSWKALLAGQSGIVNIEHFD--------------TTNFSTRFAGLVKD------FNCEEY 62 (414)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHhCCCeeeecCccc--------------cccCCCceeEEcCC------CChhHc
Confidence 4789999999999999999999999999999999887654 33556788899987 898888
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.++|++++++++.++.+||+|||++.... +..++||++|++.+++..++..+..+.+.++..++|+.++..++|
T Consensus 63 ~~~~~~~~~d~~~~~~l~a~~~Al~dAGl~~~~~-~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 141 (414)
T PRK08722 63 MSKKDARKMDLFIQYGIAAGIQALDDSGLEVTEE-NAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVN 141 (414)
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCcccc-CCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhccccccc
Confidence 8889999999999999999999999999976554 378999999999999988888888777777888899999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++|+..||++||+++|+++|+|++.||..|+++|++|++|++||||+|...+++.+.+|..++.++.. +.+|+..|
T Consensus 142 ~~a~~is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~-~~~p~~~~ 220 (414)
T PRK08722 142 MIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTR-NDEPQKAS 220 (414)
T ss_pred HHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccC-CCCCcccc
Confidence 99999999999999999999999999999999999999999999999999998899999999999999753 44577899
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|||.+++|+++|||++++|||++++|+++|+++|++|.|++.++|+.|++.|++.+++..++|++||+++||+|+||||
T Consensus 221 rpfd~~~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ 300 (414)
T PRK08722 221 RPWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFGMSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGY 300 (414)
T ss_pred CcCcCCCCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||.|
T Consensus 301 ie~h 304 (414)
T PRK08722 301 VNAH 304 (414)
T ss_pred EEcc
Confidence 9987
|
|
| >PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-57 Score=442.29 Aligned_cols=303 Identities=40% Similarity=0.685 Sum_probs=275.2
Q ss_pred CCCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCC
Q 018076 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNED 115 (361)
Q Consensus 36 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~ 115 (361)
+++++|||||||+++|+|.+.++||++|++|+++|.+++.++ ...++.++++.+++ |+..
T Consensus 126 ~~~~rVvITG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~f~--------------~~~~~~~~ag~i~~------f~~~ 185 (540)
T PLN02787 126 TKQRRVVVTGMGVVSPLGHDPDVFYNNLLEGVSGISEIERFD--------------CSQFPTRIAGEIKS------FSTD 185 (540)
T ss_pred CCCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcccccCccc--------------hhhCCccccccccc------cChh
Confidence 445799999999999999999999999999999999987654 34566777888876 8877
Q ss_pred CCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCC---CCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchh
Q 018076 116 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPS---DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIP 192 (361)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~---~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (361)
.|+++++.++|++.+++++.++++||+|||++.. ++ +..++||++|++.++...+.+.+..+. ..+..++|+.++
T Consensus 186 ~~l~~k~~r~md~~~~~al~Aa~eAL~dAGl~~~~~~~~-~~~r~GV~vGt~~g~~~~~~~~~~~l~-~~~~~~~p~~~~ 263 (540)
T PLN02787 186 GWVAPKLSKRMDKFMLYLLTAGKKALADGGITEDVMKEL-DKTKCGVLIGSAMGGMKVFNDAIEALR-ISYRKMNPFCVP 263 (540)
T ss_pred hcCCHHHHHhCCHHHHHHHHHHHHHHHHcCCCccccccc-CCCceEEEEEeccchHHHHHHHHHHHh-hccccCCcchhh
Confidence 7889999999999999999999999999999753 33 378999999999999887777665543 456678888888
Q ss_pred hhhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCC
Q 018076 193 RILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 272 (361)
Q Consensus 193 ~~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~ 272 (361)
..+.++.+++|+..||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+.|..+.+|..++.|+++ +.+
T Consensus 264 ~~~~n~~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~-~~~ 342 (540)
T PLN02787 264 FATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQR-NDD 342 (540)
T ss_pred hhcccHHHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhcc-CCC
Confidence 8899999999999999999999999999999999999999999999999999999998999999999999999864 556
Q ss_pred CCCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCC
Q 018076 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNV 352 (361)
Q Consensus 273 ~~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~ 352 (361)
|...|+|||.+++||++||||+++|||++++|++||++||++|+|++.++|++|++.|+|+++++.++|++||++|||+|
T Consensus 343 p~~~~rPFD~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p 422 (540)
T PLN02787 343 PTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGSFTCDAYHMTEPHPEGAGVILCIEKALAQSGVSK 422 (540)
T ss_pred cccccCCcccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEEEecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeecC
Q 018076 353 DGFEQLSIQ 361 (361)
Q Consensus 353 ~dId~ie~~ 361 (361)
+|||||+.|
T Consensus 423 ~dIdyInaH 431 (540)
T PLN02787 423 EDVNYINAH 431 (540)
T ss_pred HHCcEEEcc
Confidence 999999976
|
|
| >PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-56 Score=433.98 Aligned_cols=312 Identities=49% Similarity=0.828 Sum_probs=285.9
Q ss_pred CCCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCC-CC-CCCCC
Q 018076 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG-IS-SGEFN 113 (361)
Q Consensus 36 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~-~~~fd 113 (361)
|+|++|+|||+|+++|.|.+.++||++|++|++++.+++.++ +..++..+++.+++. .+ ...||
T Consensus 1 m~~~~V~ItG~g~~~p~g~~~~~~w~~l~~G~s~i~~~~~~~--------------~~~~~~~~~g~i~~~~~~~~~~fd 66 (424)
T PRK06333 1 MNKKRIVVTGMGAVSPLGCGVETFWQRLLAGQSGIRTLTDFP--------------VGDLATKIGGQVPDLAEDAEAGFD 66 (424)
T ss_pred CCCCCEEEEcceEECCCCCCHHHHHHHHHcCCCeEEeCCccc--------------ccCCCCceEEEeccccccccccCC
Confidence 446899999999999999999999999999999999999876 445667788888751 00 12388
Q ss_pred CCCCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhh
Q 018076 114 EDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR 193 (361)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (361)
++.|+++++.++|+|+++|++.++++||+|||++..++.+..++||++|++.+++..+.+.+..+...++..+.|+.++.
T Consensus 67 ~~~~i~~~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (424)
T PRK06333 67 PDRYLDPKDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPS 146 (424)
T ss_pred hhHcCCHHHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhh
Confidence 88889999999999999999999999999999987765347899999999999998888888888788888889999999
Q ss_pred hhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCC
Q 018076 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (361)
Q Consensus 194 ~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~ 273 (361)
.+.|.++++|+..||++||+++|+++|+||+.||..|+++|++|++|++||||+|..+++..+..|..++.++..++..|
T Consensus 147 ~~~~~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p 226 (424)
T PRK06333 147 FLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAP 226 (424)
T ss_pred hhhhHHHHHHHHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999987667778
Q ss_pred CCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 274 ~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
+..|+|||.+++|+++||||+++|||++++|++||++||++|.|++.++|++|++.|.+.++++.++|++||++|||+|+
T Consensus 227 ~~~~~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~ 306 (424)
T PRK06333 227 EQASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPE 306 (424)
T ss_pred CcCCCCCCCCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHH
Confidence 88999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
||||||.|
T Consensus 307 dId~i~~h 314 (424)
T PRK06333 307 EVQHLNAH 314 (424)
T ss_pred HCCEEecc
Confidence 99999986
|
|
| >COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-56 Score=422.97 Aligned_cols=301 Identities=48% Similarity=0.786 Sum_probs=276.5
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
++++|||||+|+++|+|.+.+++|++|..|+++|..++.++ ...++.++++.+++ | ..
T Consensus 1 ~~~rvviTG~g~vs~lG~~~~~~~~~l~~g~sgi~~~~~~~--------------~~~~~~~~~~~i~~------~--~~ 58 (412)
T COG0304 1 SMRRVVITGLGIVSSLGNGVEEVWAALLAGKSGIRPITRFD--------------ASGLGVKIAGEIKD------L--DD 58 (412)
T ss_pred CCceEEEecceeeecccCCHHHHHHHHhcCCCCCCcccccc--------------ccCCCCcccccccc------c--cc
Confidence 47899999999999999999999999999999999999876 55667777888876 4 34
Q ss_pred CCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCC-CCCcchhhhh
Q 018076 117 WLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRR-LSPFFIPRIL 195 (361)
Q Consensus 117 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 195 (361)
++.+++.++|+++++|++.++.+||+|||+......+. ++|+++|++.+++..++.....+...+.++ ++|+.++..+
T Consensus 59 ~~~~~~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 137 (412)
T COG0304 59 QIAKKERRFMDRFSQLAVVAAVEALEDAGLDNELNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKML 137 (412)
T ss_pred ccchHHhhcccHHHHHHHHHHHHHHHHcCCCcccccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhc
Confidence 46777788999999999999999999999983322223 999999999999998877555566566555 8999999999
Q ss_pred hhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCC
Q 018076 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (361)
Q Consensus 196 ~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 275 (361)
+++.++.++..||++||++++.++|+||..||..|+++|+.|++|++||||+|..+++..+.+|..+++|+++ +++|..
T Consensus 138 ~~~~a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~-nd~p~~ 216 (412)
T COG0304 138 PNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEK 216 (412)
T ss_pred cchHHHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccC-CCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 889999
Q ss_pred CCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 276 ~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
.|||||.+++||++|||++++|||+.|+|++||++||++|.|++.++|++|++.|.|+|++..++|+.||++|||+|+||
T Consensus 217 asrPfd~~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~i 296 (412)
T COG0304 217 ASRPFDKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDI 296 (412)
T ss_pred cCCCCCCCCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEEecccccccCCCCCCCchHHHHHHHHHHHcCCCHhHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
|||--|
T Consensus 297 dYinaH 302 (412)
T COG0304 297 DYINAH 302 (412)
T ss_pred CEEeCC
Confidence 999765
|
|
| >PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-55 Score=424.75 Aligned_cols=321 Identities=75% Similarity=1.222 Sum_probs=283.0
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.++|+|||||+++|+|.+.++||++|++|+++|++++.++|....|+.+........++.++++.++.......||+..|
T Consensus 5 ~~~VvItG~g~~~p~g~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~ 84 (437)
T PLN02836 5 TRRVVVTGLGLVTPLGCGVETTWRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFDEELW 84 (437)
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCChHHh
Confidence 68899999999999999999999999999999999999887655543221111134567788888864323445887766
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+. .+++++..+|++.++.+||+|||+.+.+....+++||++|++.++...+.+.+..+.+.+...++|+.+++.+.|
T Consensus 85 ~~---~~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n 161 (437)
T PLN02836 85 LN---SRSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILIN 161 (437)
T ss_pred cc---ccccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhccc
Confidence 43 457899999999999999999999764322368999999999999888888777777777778899999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
+++++|+..|+++||+++|+++|+||+.||..|+++|++|++|++||||+|..+++..+..|..++.++..++.+|+..+
T Consensus 162 ~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~ 241 (437)
T PLN02836 162 MAAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEAS 241 (437)
T ss_pred HHHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCccccc
Confidence 99999999999999999999999999999999999999999999999999988899999999999999876666778899
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|||.+++|+++||||+++|||++++|+++|+++|++|+|++.++|+.|++.|++++++..++|++||++|||+|+||||
T Consensus 242 ~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ 321 (437)
T PLN02836 242 RPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYGMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDY 321 (437)
T ss_pred CCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeeeecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||.|
T Consensus 322 ve~h 325 (437)
T PLN02836 322 VNAH 325 (437)
T ss_pred EEcc
Confidence 9986
|
|
| >PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-54 Score=412.42 Aligned_cols=300 Identities=35% Similarity=0.518 Sum_probs=268.8
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
++|||||||+++|.|.+.++||++|.+|+++|++++.+++ ...++..+++.+++ |+...++
T Consensus 2 ~~VvITG~g~vtp~G~~~~~~~~~L~~g~s~i~~~~~~~~-------------~~~~~~~~~~~v~~------~~~~~~~ 62 (405)
T PRK09116 2 RRVVVTGMGGVTALGEDWQTIAARLKAGRNAVRRMPEWDR-------------YDGLNTRLAAPIDD------FELPAHY 62 (405)
T ss_pred CCEEEEeeEEECCCCCCHHHHHHHHHcCCCCEEeCCchhh-------------ccCCCCceEEEecC------cChhHhc
Confidence 7899999999999999999999999999999999987541 13567788999987 7777778
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
++++.++|++.++|++.++.+||+|||+......+..++||++|++.|+......+...+.+.+...+++..++..++|.
T Consensus 63 ~~~~~r~~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~ 142 (405)
T PRK09116 63 TRKKIRSMGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHT 142 (405)
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccH
Confidence 88889999999999999999999999995432223679999999999998888888777777777778888899999999
Q ss_pred HHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCc
Q 018076 199 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278 (361)
Q Consensus 199 ~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 278 (361)
++++|+..|+++||+++|+++|+|++.||..|+++|++|++|++||||+|. +++.....|..++.++.. +..|+..++
T Consensus 143 ~a~~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l~~~~~~-~~~~~~~~r 220 (405)
T PRK09116 143 TAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTLFATSTR-NDAPELTPR 220 (405)
T ss_pred HHHHHHHHhCCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHhhhhccC-CCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999998 788888889888877642 344677899
Q ss_pred CCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 279 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
|||.+++|+++|||++++|||++++|++||++||++|.|++.++|+.|++.|+ ..++.++|+++|+++|++|+|||||
T Consensus 221 Pfd~~~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~~~~d~~~~~~p~--~~~~~~ai~~AL~~Agi~p~dId~I 298 (405)
T PRK09116 221 PFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFGTNSDGAHVTQPQ--AETMQIAMELALKDAGLAPEDIGYV 298 (405)
T ss_pred CCcCCCCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEEEcCCCCcCCCCC--HHHHHHHHHHHHHHhCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999988775 5667899999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
+.|
T Consensus 299 ~~H 301 (405)
T PRK09116 299 NAH 301 (405)
T ss_pred ECc
Confidence 976
|
|
| >cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-53 Score=409.51 Aligned_cols=296 Identities=29% Similarity=0.442 Sum_probs=268.9
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
++|+|||+|+++|+|.+.++||++|++|+++|.+++.++ ...++..+++.+++ |+...++
T Consensus 1 ~~VvItG~G~vsp~G~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~g~i~~------~~~~~~~ 60 (399)
T cd00832 1 RRAVVTGIGVVAPNGLGVEEYWKAVLDGRSGLGPITRFD--------------PSGYPARLAGEVPD------FDAAEHL 60 (399)
T ss_pred CCEEEEeeEEeCCCCCCHHHHHHHHHhCCCeEeeCCccc--------------cccCCCceeEEeCC------cChhhcC
Confidence 479999999999999999999999999999999886543 23456677888886 8877778
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
++++.++|+++++|++.++.+||+|||++...+. ..++||++|++.+++...+..+..+...++..+.++.++..+.+.
T Consensus 61 ~~~~~~~~d~~~~~~l~aa~eAl~dAGl~~~~~~-~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (399)
T cd00832 61 PGRLLPQTDRMTRLALAAADWALADAGVDPAALP-PYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAV 139 (399)
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHHcCCCccccC-CCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhH
Confidence 9999999999999999999999999999876653 789999999999999888888877777777888888888889999
Q ss_pred HHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCc
Q 018076 199 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278 (361)
Q Consensus 199 ~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 278 (361)
.+++|+..||++||+++|+++|+|++.||..|+++|++|+ |++||||+|..++|..+..|..++.++. ..+|...|+
T Consensus 140 ~a~~is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~--~~~p~~~~r 216 (399)
T cd00832 140 NTGQISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAYL 216 (399)
T ss_pred HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCC--CCCCCCCcC
Confidence 9999999999999999999999999999999999999999 9999999999999999999999999874 344677999
Q ss_pred CCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 279 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
|||.+++||++|||++++|||++++|++||++||++|.|++.++|+.+... .+.++.++|++||+++|++|+|||||
T Consensus 217 PFd~~~~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~---~~~~~~~a~~~al~~ag~~~~~i~~v 293 (399)
T cd00832 217 PFDAAAAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYAATFDPPPGSG---RPPGLARAIRLALADAGLTPEDVDVV 293 (399)
T ss_pred CCcCCCCCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEEEcCCCCCCCC---CHHHHHHHHHHHHHHcCCCHHHccEE
Confidence 999999999999999999999999999999999999999999999987642 47888999999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
+.|
T Consensus 294 ~~h 296 (399)
T cd00832 294 FAD 296 (399)
T ss_pred Eec
Confidence 865
|
CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. |
| >PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=412.50 Aligned_cols=302 Identities=54% Similarity=0.891 Sum_probs=280.6
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|++|+|||+|+++|.|.+.++||++|++|++.+++++.++ ...++..+++.+++ ||++.|
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~--------------~~~~~~~~~g~i~~------f~~~~~ 60 (411)
T PRK07314 1 KRRVVVTGLGAVSPLGNDVESTWKNLLAGKSGIGPITHFD--------------TSDLAVKIAGEVKD------FNPDDY 60 (411)
T ss_pred CCcEEEEcceEECCCcCCHHHHHHHHHhCCCcEEECCccc--------------ccCCCccEEEEeCC------cChhhc
Confidence 4789999999999999999999999999999999988754 34556678899987 998888
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.++|+|+++|++.++.+||+|||+++.+++ ..++||++|++.++...+++.+..+...++..+.|+.+++.+.+
T Consensus 61 ~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (411)
T PRK07314 61 MSRKEARRMDRFIQYGIAAAKQAVEDAGLEITEEN-ADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIIN 139 (411)
T ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHHcCCCcccCC-cccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcch
Confidence 99999999999999999999999999999988774 88999999999999999999988888888888888889999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
..+++|+..||++||+++++++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++.+ ..+|...+
T Consensus 140 ~~a~~is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~-~~~p~~~~ 218 (411)
T PRK07314 140 MAAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTR-NDDPERAS 218 (411)
T ss_pred HHHHHHHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCC-CCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999988899999999999988853 45577889
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|||.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+++.|++.+.+..+++++||+++|++++||||
T Consensus 219 ~pfd~~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~ 298 (411)
T PRK07314 219 RPFDKDRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYGMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDY 298 (411)
T ss_pred CCCcCCCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999999999888888899999999999999999999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||.|
T Consensus 299 v~~h 302 (411)
T PRK07314 299 INAH 302 (411)
T ss_pred EEcc
Confidence 9975
|
|
| >PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-53 Score=406.18 Aligned_cols=295 Identities=36% Similarity=0.562 Sum_probs=263.0
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
++|||||+|+++|.|.+.++||++|++|+++|.+++.++ ...++..+++.++ |++..++
T Consensus 2 ~rVvITG~G~vsp~G~~~~~~w~~l~~G~sgi~~~~~~~--------------~~~~~~~~~g~~~-------~~~~~~~ 60 (406)
T PRK07967 2 RRVVITGLGIVSSIGNNQQEVLASLREGRSGITFSPEFA--------------EMGMRSQVWGNVK-------LDPTGLI 60 (406)
T ss_pred CcEEEEcceEECCCCCCHHHHHHHHHcCCCceeECCccc--------------ccCCCCceEEEcC-------CChhhcC
Confidence 799999999999999999999999999999999988765 4456777888764 7776777
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHH-hccCCCCCcchhhhhhh
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICE-KRLRRLSPFFIPRILIN 197 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 197 (361)
+++..+++++..++++.++.+||+|||+...+.. ..++||++|++.+........+..+.. .+++.+.|+.++..+++
T Consensus 61 ~~~~~~~~~r~~~~a~~aa~~Al~dAGl~~~~~~-~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 139 (406)
T PRK07967 61 DRKVMRFMGDASAYAYLAMEQAIADAGLSEEQVS-NPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMAS 139 (406)
T ss_pred CHHHhhcCCHHHHHHHHHHHHHHHHcCCCCccCC-CCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccc
Confidence 7788899999999999999999999999866553 789999999988887666665555554 56677889999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++|+..|+++||+++|+++|+|++.||..|+++|++|++|++||||+|. +.+.....|..++.++..++..|+..|
T Consensus 140 ~~a~~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~~~ls~~~~~~p~~~~ 218 (406)
T PRK07967 140 TVSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAMGALSTKYNDTPEKAS 218 (406)
T ss_pred hHHHHHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHhhhhccCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999997 566667779999999876566788899
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
||||.+++||++|||++++|||++++|++||++||++|.|++.++|++|++.| +++++.++|++||+.++ + ||||
T Consensus 219 rPFd~~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g~~~d~~~~~~p--~~~~~~~a~~~Al~~~~--~-~Idy 293 (406)
T PRK07967 219 RAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMALATVD--T-PIDY 293 (406)
T ss_pred cCCcCCCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEECCCCCCCCCC--CHHHHHHHHHHHHhCCC--C-CccE
Confidence 99999999999999999999999999999999999999999999999999877 57888999999998654 5 9999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
|+.|
T Consensus 294 i~aH 297 (406)
T PRK07967 294 INTH 297 (406)
T ss_pred EEcC
Confidence 9976
|
|
| >PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-53 Score=407.84 Aligned_cols=301 Identities=33% Similarity=0.514 Sum_probs=271.8
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
+++|+|||||+++|.|.+.++||++|++|+++|.+++..++. ...++.++++.+++ .||+ +
T Consensus 11 ~~~VvItGig~~sp~g~~~~~~w~~L~~G~s~i~~~~~~~~~------------~~~~~~~~~g~i~~-----~~d~--~ 71 (418)
T PRK07910 11 FPNVVVTGIAMTTALATDAETTWKLLLDGQSGIRTLDDPFVE------------EFDLPVRIGGHLLE-----EFDH--Q 71 (418)
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeeEeCChhhhh------------ccCCCcceEEEecc-----Cccc--c
Confidence 479999999999999999999999999999999988764321 12355677888752 2654 3
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.++|+|++++++.++++||+|||++. . +..++||++|++.++...+...+..+...+++.++++.++..++|
T Consensus 72 ~~~~~~~~~d~~~~~~l~aa~~AledAg~~~--~-~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n 148 (418)
T PRK07910 72 LTRVELRRMSYLQRMSTVLGRRVWENAGSPE--V-DTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPN 148 (418)
T ss_pred CCHHHHhhccHHHHHHHHHHHHHHHHcCCCC--C-CcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccc
Confidence 7888899999999999999999999999853 3 478999999999999988888888877778888889999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccc-ccccCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRA-LTTKYNGTPQEA 276 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~-ls~~~~~~~~~~ 276 (361)
.++.+++..++++||+++++++|+|++.||.+|+++|++|++|++||||+|..+++..+..|..++. ++.. +..|++.
T Consensus 149 ~~a~~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~-~~~~~~~ 227 (418)
T PRK07910 149 GPAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAGA 227 (418)
T ss_pred cHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccC-CCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999899999999999998 7642 4457789
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
|+|||.+++|+++|||++++|||++++|+++|++||++|+|++.++|++|++.|++.+.++.++|++||+++||+|+|||
T Consensus 228 ~rPFd~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~did 307 (418)
T PRK07910 228 CRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDID 307 (418)
T ss_pred cCCCcCCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||.|
T Consensus 308 ~ie~h 312 (418)
T PRK07910 308 HVNAH 312 (418)
T ss_pred EEEcC
Confidence 99986
|
|
| >PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-53 Score=405.82 Aligned_cols=298 Identities=44% Similarity=0.754 Sum_probs=274.4
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|++|+|||+|+++|+|.+.++||++|++|+++|.+++.++ ...++..+++.+++ ||+..+
T Consensus 1 m~~v~ItG~g~vsp~G~~~~~~~~~L~~G~s~i~~~~~~~--------------~~~~~~~~~g~i~~------f~~~~~ 60 (406)
T PRK08439 1 MKRVVVTGIGMINSLGLNKESSFKAICNGECGIKKITLFD--------------ASDFPVQIAGEITD------FDPTEV 60 (406)
T ss_pred CCCEEEEeeEEECCCcCCHHHHHHHHHcCCCceEeCCCcc--------------ccCCCCceeEEcCC------cChhhc
Confidence 3789999999999999999999999999999999987754 34566778888876 998888
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.+++++..+|++.++.+||+|||+++.+++ ..++|+++|++.++...++..+..+...++..++|+.++..+.|
T Consensus 61 ~~~~~~~~~~~~~~l~~~Aa~~AL~dAGl~~~~~~-~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (406)
T PRK08439 61 MDPKEVKKADRFIQLGLKAAREAMKDAGFLPEELD-AERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVN 139 (406)
T ss_pred CCHHHHhhcCHHHHHHHHHHHHHHHHcCCCcccCC-CCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhccccccc
Confidence 88899999999999999999999999999877764 78999999999999888888777777788888999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++|+..||++||+++++++|+|++.||..|+++|++|++|++||+|+|..+++..+.+|..++.|+.. +.+|...|
T Consensus 140 ~~a~~is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~-~~~p~~~~ 218 (406)
T PRK08439 140 MLGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTR-NDDPKKAS 218 (406)
T ss_pred HHHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccC-CCCCccCc
Confidence 99999999999999999999999999999999999999999999999999998999999999999999853 44577889
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|||.+++|+++|||++++|||++++|++||++||++|.|++.++|++|++.|++ .++.++|++||+++|+ +||||
T Consensus 219 rpfd~~~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i~~ 294 (406)
T PRK08439 219 RPFDKDRDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFGESGDANHITSPAP--EGPLRAMKAALEMAGN--PKIDY 294 (406)
T ss_pred CCccCCCCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEEccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--CccCE
Confidence 9999999999999999999999999999999999999999999999999999887 5668999999999999 79999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||.|
T Consensus 295 v~~h 298 (406)
T PRK08439 295 INAH 298 (406)
T ss_pred EEcc
Confidence 9976
|
|
| >TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-52 Score=400.88 Aligned_cols=301 Identities=54% Similarity=0.872 Sum_probs=278.5
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
++|+|||+|+++|.|.+.++||++|++|++.+.+++.++ ...++..+++.+++ ||++.|+
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~--------------~~~~~~~~~g~i~~------f~~~~~~ 60 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGNGVEEFWENLLAGKSGIGPITRFD--------------ASDLPVKIAGEVKD------FDPEDYI 60 (407)
T ss_pred CcEEEEcceEECCCcCCHHHHHHHHHcCCCeeEECCccc--------------ccCCCCcEEEEeCC------cChhhcC
Confidence 479999999999999999999999999999999988754 34566778899987 9998889
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
++++.++|+++++|++.++++||+|||+++.+++ ..++|+++|++.++...++..+..+...++..++|+.++..+.+.
T Consensus 61 ~~~~~~~~~~~~~l~~~aa~~Al~dAgl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (407)
T TIGR03150 61 DKKEARRMDRFIQYALAAAKEAVEDSGLDIEEED-AERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINM 139 (407)
T ss_pred CHHHHhhcCHHHHHHHHHHHHHHHhcCCCcccCC-ccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccH
Confidence 9999999999999999999999999999988774 889999999999999888888888888888888899899999999
Q ss_pred HHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCc
Q 018076 199 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278 (361)
Q Consensus 199 ~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 278 (361)
++++|+..||++||+++|+++|+|++.||..|+++|++|++|++||+|+|..+++..+..|...+.++. ++.++...++
T Consensus 140 ~a~~is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~-~~~~~~~~~~ 218 (407)
T TIGR03150 140 AAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALST-RNDDPEKASR 218 (407)
T ss_pred HHHHHHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccC-CCCCCCcCCC
Confidence 999999999999999999999999999999999999999999999999998889999999998888874 2445667899
Q ss_pred CCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 279 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
|||.+++|+++||||+++||+++++|+++|+++|++|.|++.++|+.+++.|.+.+.++.++|++||++|||+++|||||
T Consensus 219 pfd~~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~v 298 (407)
T TIGR03150 219 PFDKDRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYGMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYI 298 (407)
T ss_pred CCcCCCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEEECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEE
Confidence 99999999999999999999999999999999999999999999999998888888889999999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
|.|
T Consensus 299 e~h 301 (407)
T TIGR03150 299 NAH 301 (407)
T ss_pred eCc
Confidence 986
|
FabB sequences should fall well below the noise cutoff of this model. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-52 Score=460.55 Aligned_cols=308 Identities=22% Similarity=0.359 Sum_probs=268.5
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCC-ccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNF-DRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
.++|+||||||++|++.+.++||++|.+|+++|++++..+|+.+.| +++... ..+.+++.+|++++ .+||+.+
T Consensus 6 ~~~IAIvGmg~~~P~a~~~~~fW~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~--~~~~~~~~ggfl~~----v~FD~~~ 79 (2582)
T TIGR02813 6 DMPIAIVGMASIFANSRYLNKFWDLIFEKIDAITDVPSDHWAKDDYYDSDKSE--ADKSYCKRGGFLPE----VDFNPME 79 (2582)
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCCccCCCChhhCChhhccCccccc--cCCcccceeEecCc----cCCCHhh
Confidence 4569999999999999999999999999999999999999987765 555443 45678889999986 3499999
Q ss_pred C-CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHH-----------H----------H
Q 018076 117 W-LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTV-----------D----------A 174 (361)
Q Consensus 117 ~-~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~-----------~----------~ 174 (361)
| +++++.+.|||+++|+++++++||+|||+... . +.+++|||+|++.+...... + .
T Consensus 80 F~i~p~ea~~mDpqqrl~L~~a~eALedAG~~~~-~-~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (2582)
T TIGR02813 80 FGLPPNILELTDISQLLSLVVAKEVLNDAGLPDG-Y-DRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDED 157 (2582)
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHhCCCCCC-C-CCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhh
Confidence 9 99999999999999999999999999999644 3 48899999998766432100 0 0
Q ss_pred HHHHH---HhccCCCCCcchhhhhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCC
Q 018076 175 AQMIC---EKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 251 (361)
Q Consensus 175 ~~~~~---~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~ 251 (361)
...+. ...+..+.+..+++.+.|+++++|++.|||+||+++|+++|+||+.||++|++.|++|+||++||||++..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~ 237 (2582)
T TIGR02813 158 SEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDN 237 (2582)
T ss_pred HHHhhhhhcccccccCccccccccccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeC
Confidence 11111 112233556678899999999999999999999999999999999999999999999999999999999989
Q ss_pred ChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC--CCCC
Q 018076 252 DALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQ 329 (361)
Q Consensus 252 ~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~~~~ 329 (361)
++..+..|.+.++++ +++.|+|||.++|||++|||++++|||++++|+++|++||++|+|++.++||+ +++.
T Consensus 238 ~p~~~~~fs~~~~lS------~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g~~~DG~~~~ita 311 (2582)
T TIGR02813 238 SPFMYMSFSKTPAFT------TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVGASSDGKFKSIYA 311 (2582)
T ss_pred CHHHHHHHHhccCcC------CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEEEcCCCCCCCCcC
Confidence 999999999999999 66889999999999999999999999999999999999999999999999997 6777
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 330 PHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 330 p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
|++++ +.++|++||++|||+|+||+|||-|
T Consensus 312 P~~~g--q~~~i~~Al~~Agi~p~~I~yIeaH 341 (2582)
T TIGR02813 312 PRPEG--QAKALKRAYDDAGFAPHTCGLIEAH 341 (2582)
T ss_pred CCHHH--HHHHHHHHHHHcCCCHHHCCEEEec
Confidence 77655 5899999999999999999999976
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-50 Score=392.25 Aligned_cols=306 Identities=26% Similarity=0.376 Sum_probs=261.1
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|++|||||||+++|.|.+.++||++|++|+++|++++.+++.. ++... ....+..+++++++ |+...+
T Consensus 1 m~~VvItG~g~vsp~g~~~~~~w~~l~~g~s~i~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~------~~~~~~ 68 (410)
T PRK07103 1 MDEVVVTGVGVVSAIGQGRPSFAAALLAGRHAFGVMRRPGRQV----PDDAG--AGLASAFIGAELDS------LALPER 68 (410)
T ss_pred CCCEEEEcceEECCCcCCHHHHHHHHHcCCCeEecCCcccccc----ccccc--ccCCCceEEEEeCC------CChhhc
Confidence 4789999999999999999999999999999999998765210 00000 11334567888986 666666
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
++++..+++++..+|++.++.+||+|||+.. . +..++||++|++.+........+..+ ..++..+.|++....+++
T Consensus 69 ~~~~~~r~~~~~~~lal~Aa~eAl~dAgl~~--~-~~~riGvivG~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~ 144 (410)
T PRK07103 69 LDAKLLRRASLSAQAALAAAREAWRDAALGP--V-DPDRIGLVVGGSNLQQREQALVHETY-RDRPAFLRPSYGLSFMDT 144 (410)
T ss_pred CCHHHhhcCCHHHHHHHHHHHHHHHhcCcCC--C-CCCCEEEEEccCCcchHHHHHHHHHh-ccCccccChhhhhhhcch
Confidence 7888889999999999999999999999953 2 37899999998877666555554444 234556677777778888
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccccccc-CCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-YNGTPQEA 276 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-~~~~~~~~ 276 (361)
.++++|+..||++||+++++++|+|++.||..|+++|++|++|++||+|++..+++..+.+|..++.++.. +..+|+..
T Consensus 145 ~~a~~ia~~lgl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~ 224 (410)
T PRK07103 145 DLVGLCSEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAA 224 (410)
T ss_pred HHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccC
Confidence 99999999999999999999999999999999999999999999999999887899999999999988642 34567889
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
|+|||.+++|+++|||++++|||++++|+++|+++|++|.|++.++|+++.+.|+ ..++.++|++||++|||+|+|||
T Consensus 225 ~rPfd~~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~--~~~~~~a~~~Al~~Agi~~~dId 302 (410)
T PRK07103 225 CRPFDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSMRLDANRGPDPS--LEGEMRVIRAALRRAGLGPEDID 302 (410)
T ss_pred cCCCCCCCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEEEecCCCCCCCCC--HHHHHHHHHHHHHHcCCCHHHCC
Confidence 9999999999999999999999999999999999999999999999999877654 55668999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||.|
T Consensus 303 ~v~~h 307 (410)
T PRK07103 303 YVNPH 307 (410)
T ss_pred EEEcc
Confidence 99986
|
|
| >cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-49 Score=385.29 Aligned_cols=301 Identities=51% Similarity=0.849 Sum_probs=278.8
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
++|+|||||+++|.|.+.++||++|++|++++++++.++ ...++..+++.+++ |+..+++
T Consensus 1 ~~i~I~G~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~--------------~~~~~~~~~~~i~~------~~~~~~~ 60 (406)
T cd00834 1 RRVVITGLGAVTPLGNGVEEFWEALLAGRSGIRPITRFD--------------ASGFPSRIAGEVPD------FDPEDYL 60 (406)
T ss_pred CcEEEECcceeCCCcCCHHHHHHHHHcCCCeeEECCccc--------------ccCCCccEEEEcCC------CChhhcC
Confidence 479999999999999999999999999999999998765 34566788999987 7776558
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
++++.++|+++++|++.++++||+|||++..+++ ..++|+++|++.++....+..+..+...++..++|+.++..+.+.
T Consensus 61 ~~~~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (406)
T cd00834 61 DRKELRRMDRFAQFALAAAEEALADAGLDPEELD-PERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNM 139 (406)
T ss_pred CHHHhccCCHHHHHHHHHHHHHHHHcCCCcccCC-ccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccH
Confidence 9999999999999999999999999999988774 899999999999999999999998888888889999999999999
Q ss_pred HHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCc
Q 018076 199 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278 (361)
Q Consensus 199 ~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 278 (361)
++++|+..||++||+++++++|+|++.||..|+++|++|++|.+||+|+|...+|..+..|..++.++..+. .|+..++
T Consensus 140 ~a~~ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~-~p~~~~~ 218 (406)
T cd00834 140 AAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRND-DPEKASR 218 (406)
T ss_pred HHHHHHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCC-CCccCCC
Confidence 999999999999999999999999999999999999999999999999999777999999999999986422 2566899
Q ss_pred CCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 279 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
|||.+++|+++||||+++||++.++|+++|+++|++|.|++.++++.+++.|++.+.++.++++++|+++|++++|||||
T Consensus 219 pf~~~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v 298 (406)
T cd00834 219 PFDKDRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYI 298 (406)
T ss_pred CCCCCCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEEecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 99999999999999999999999999999999999999999999999988888888999999999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
|.|
T Consensus 299 ~~h 301 (406)
T cd00834 299 NAH 301 (406)
T ss_pred ecc
Confidence 986
|
KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. |
| >PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-49 Score=378.93 Aligned_cols=277 Identities=34% Similarity=0.523 Sum_probs=240.6
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|+||||||+|+++|+|. .++||++|++|+++|.+++.++. ....+ .+.+. ++
T Consensus 1 ~~rVvITG~G~vsp~G~-~~~~~~~l~~G~sgi~~~~~~~~-------------~~~~~---~~~~~-------~~---- 52 (381)
T PRK05952 1 MMKVVVTGIGLVSALGD-LEQSWQRLLQGKSGIKLHQPFPE-------------LPPLP---LGLIG-------NQ---- 52 (381)
T ss_pred CCeEEEEeeEEECcccC-HHHHHHHHHcCCCCeEeCCcccc-------------ccccc---ceeec-------cc----
Confidence 56899999999999999 99999999999999998877530 00111 11110 00
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhcc---CCCCCcchhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL---RRLSPFFIPRI 194 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 194 (361)
+ ..+++ ++..++.+||+|||+... ..++||++|++.++...+++.+..+.+.+. ..+.|..++..
T Consensus 53 --~---~~~~~---~~~~a~~~Al~dagl~~~----~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (381)
T PRK05952 53 --P---SSLED---LTKTVVTAALKDAGLTPP----LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDT 120 (381)
T ss_pred --c---ccccH---HHHHHHHHHHHhcCCCCC----CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHh
Confidence 1 12333 555789999999999742 578999999999998888887776665443 25677888899
Q ss_pred hhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCC
Q 018076 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (361)
Q Consensus 195 ~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~ 274 (361)
++|.+++++++.|+++||+++++++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++.
T Consensus 121 ~~n~~a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~------- 193 (381)
T PRK05952 121 LPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAK------- 193 (381)
T ss_pred cccHHHHHHHHHhCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCC-------
Confidence 9999999999999999999999999999999999999999999999999999998899999999999999884
Q ss_pred CCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 275 ~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
..|+|||.+++|+++|||++++|||++++|+++|++||++|.|++.++|+.|++.|+++++.+.++|++||+++||+|+|
T Consensus 194 ~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~d 273 (381)
T PRK05952 194 TGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILGFGLTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPED 273 (381)
T ss_pred CCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||.|
T Consensus 274 Id~i~~h 280 (381)
T PRK05952 274 IDYIHAH 280 (381)
T ss_pred eeEEEcc
Confidence 9999975
|
|
| >PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-49 Score=383.53 Aligned_cols=306 Identities=50% Similarity=0.812 Sum_probs=270.2
Q ss_pred eeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccc--cCCCcceeeEEeCCCCCCCCCCCCCCCCchhhcc
Q 018076 48 MVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHA--FGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRS 125 (361)
Q Consensus 48 ~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~fd~~~~~~~~~~~~ 125 (361)
+++|.|.++++||++|++|+++|.+++.++|....+++.....+ ...+++.++++++. ..||+..|... .+
T Consensus 1 ~vs~~G~~~~~~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~----~~f~~~~~~~~---~~ 73 (421)
T PTZ00050 1 VVTPLGVGAESTWEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ----SEFDPSDFAPT---KR 73 (421)
T ss_pred CCCCCcCCHHHHHHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCc----ccCChhHcCCc---cc
Confidence 47999999999999999999999999998865554433211100 33567788999874 24887766322 24
Q ss_pred cCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHH
Q 018076 126 IARFIAYALCAADEALHDAKWL-PSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 204 (361)
Q Consensus 126 ~~~~~~l~l~a~~~Al~dAg~~-~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 204 (361)
.++.++|++.++.+||+|||+. +.+++ ..++|+++|++.+++......+..+...+...++++.+++.+.|.++++|+
T Consensus 74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~-~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is 152 (421)
T PTZ00050 74 ESRATHFAMAAAREALADAKLDILSEKD-QERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVA 152 (421)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccccC-cccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHH
Confidence 5899999999999999999998 56654 789999999999998888877777777788888999999999999999999
Q ss_pred HHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 205 MKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 205 ~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
..||++||+++|+++|+||+.||..|+++|++|++|++||||+|..++|..+.+|.+++.++..++.+|+..++|||.++
T Consensus 153 ~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 153 IKHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred HHhCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 99999999999999999999999999999999999999999999878999999999999988655566788999999999
Q ss_pred CcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHH-cCCCCCCcceeecC
Q 018076 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ-VVHNVDGFEQLSIQ 361 (361)
Q Consensus 285 ~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~-Agl~~~dId~ie~~ 361 (361)
+|+++||||+++|||++++|+++|++||++|+|++.++|+.|++.|++.+.++.++|++||++ |||+|+||||||+|
T Consensus 233 ~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dId~ie~h 310 (421)
T PTZ00050 233 AGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYGSSSDAHHITAPHPDGRGARRCMENALKDGANININDVDYVNAH 310 (421)
T ss_pred CCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhCCEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999 99999999999987
|
|
| >cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=376.53 Aligned_cols=290 Identities=34% Similarity=0.546 Sum_probs=257.8
Q ss_pred CceEEEeeceeCCCCCC---HHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCG---AETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNED 115 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~---~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~ 115 (361)
.+|+|||||+++|.|.+ .++||++|.+|++++.+++.++ ..++..+++.+++ |+
T Consensus 1 ~~v~ItG~g~v~p~g~~~~~~~~~w~~l~~g~s~i~~~~~~~---------------~~~~~~~~g~i~~------~~-- 57 (407)
T cd00828 1 SRVVITGIGVVSPHGEGCDEVEEFWEALREGRSGIAPVARLK---------------SRFDRGVAGQIPT------GD-- 57 (407)
T ss_pred CCEEEECceeecCCCCCCCCHHHHHHHHHcCCCceeeCCccc---------------ccCCccEEEEccC------CC--
Confidence 36999999999999999 9999999999999999988754 1345677888886 55
Q ss_pred CCCCchhhccc---CHHHHHHHHHHHHHHHHCCCCCCC-CCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcch
Q 018076 116 SWLNSKDHRSI---ARFIAYALCAADEALHDAKWLPSD-QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFI 191 (361)
Q Consensus 116 ~~~~~~~~~~~---~~~~~l~l~a~~~Al~dAg~~~~~-~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (361)
++++..+++ +++++|++.++.+||+|||++..+ ++ ..++|+++|++.++....+..+..+. +...++.+
T Consensus 58 --~~~~~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~-~~~~gv~~g~~~~~~~~~~~~~~~~~----~~~~~~~~ 130 (407)
T cd00828 58 --IPGWDAKRTGIVDRTTLLALVATEEALADAGITDPYEVH-PSEVGVVVGSGMGGLRFLRRGGKLDA----RAVNPYVS 130 (407)
T ss_pred --cCHHHHHhccCCCHHHHHHHHHHHHHHHhCCCCccccCC-ccCeEEEEeeccCCHHHHHHHHHHHh----hccCCccc
Confidence 567777888 999999999999999999998776 53 78999999999998887776665544 34567777
Q ss_pred hhhhh--hHHHHHHHHHcCC-CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccccccc
Q 018076 192 PRILI--NMASGHVSMKYGF-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK 268 (361)
Q Consensus 192 ~~~~~--~~~a~~is~~lgl-~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~ 268 (361)
+..+. +.++++|+..|++ +||+++|+++|+|++.||..|+++|++|++|++||||+|... +..+..|..++.++..
T Consensus 131 ~~~~~~~~~~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~~~~~ls~~ 209 (407)
T cd00828 131 PKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFANMGALSTA 209 (407)
T ss_pred chhccccchHHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHHHcCCCCCC
Confidence 88887 9999999999999 999999999999999999999999999999999999999866 8889999999998853
Q ss_pred CCCCCCCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHc
Q 018076 269 YNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQV 348 (361)
Q Consensus 269 ~~~~~~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~A 348 (361)
...|+..++|||.+++|+++||||+++|||++++|+++|++||++|.|++.++|+.+.+.+. ++.++.++|++||++|
T Consensus 210 -~~~~~~~~~pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~-~~~~~~~a~~~Al~~A 287 (407)
T cd00828 210 -EEEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTASTTDGAGRSVPA-GGKGIARAIRTALAKA 287 (407)
T ss_pred -CCCCCcccCCCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEEeccCCCCCCCCC-ChHHHHHHHHHHHHHc
Confidence 22355789999999999999999999999999999999999999999999999999887766 7888999999999999
Q ss_pred CCCCCCcceeecC
Q 018076 349 VHNVDGFEQLSIQ 361 (361)
Q Consensus 349 gl~~~dId~ie~~ 361 (361)
|++|+||||||.|
T Consensus 288 gi~~~dId~i~~h 300 (407)
T cd00828 288 GLSLDDLDVISAH 300 (407)
T ss_pred CCCHHHcCEEecc
Confidence 9999999999976
|
They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. |
| >PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-48 Score=370.10 Aligned_cols=284 Identities=24% Similarity=0.337 Sum_probs=232.9
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.++|||||||+++|.|.+.++||++|++|+++ ..++..+ +..++... +.+ ++.+.+
T Consensus 5 ~~rVvITGiG~vsp~G~~~e~~w~aL~~G~sg-~~~~~~~--------------~~~~~~~~---~~~------~~~~~~ 60 (398)
T PRK06519 5 PNDVVITGIGLVSSLGEGLDAHWNALSAGRPQ-PNVDTET--------------FAPYPVHP---LPE------IDWSQQ 60 (398)
T ss_pred CCCEEEEcceEECCCCCCHHHHHHHHHcCCCC-CCCCccc--------------ccCcCccc---ccc------cChhhc
Confidence 57899999999999999999999999999987 2111111 11111111 222 333344
Q ss_pred CCch-hhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHH------------HHHHHHhccC
Q 018076 118 LNSK-DHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDA------------AQMICEKRLR 184 (361)
Q Consensus 118 ~~~~-~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~------------~~~~~~~~~~ 184 (361)
++++ ..++|++.++|++.++.+||+|||+...+. +..++||++|++.++....++. +..+.+.+++
T Consensus 61 ~~~~~~~r~~~r~~~~a~~Aa~~Al~dAGl~~~~~-~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (398)
T PRK06519 61 IPKRGDQRQMETWQRLGTYAAGLALDDAGIKGNEE-LLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMT 139 (398)
T ss_pred CCchhhhhccCHHHHHHHHHHHHHHHHcCCCCCCC-CccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCC
Confidence 5555 678999999999999999999999975433 3679999999999987665432 2334455677
Q ss_pred CCCCcchhhhhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccc
Q 018076 185 RLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRA 264 (361)
Q Consensus 185 ~~~~~~~~~~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ 264 (361)
.++|++++..++|.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.
T Consensus 140 ~~~p~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ 219 (398)
T PRK06519 140 ELRPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGL 219 (398)
T ss_pred ccChhhhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCc
Confidence 78999999999999999999999999999999999999999999999999999999999999999889999999999998
Q ss_pred ccccCCCCCCCCCcC-CCC---CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHH
Q 018076 265 LTTKYNGTPQEASRP-FDC---GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILA 340 (361)
Q Consensus 265 ls~~~~~~~~~~~~p-fd~---~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a 340 (361)
++. ..++| ||. +++||++|||++++|||++++|++||++||++|.|++.. .. +. ...++.++
T Consensus 220 ls~-------~~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~~d--~~----~~-~~~~~~~a 285 (398)
T PRK06519 220 LLK-------GGWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVESD--RA----RR-APGDLEAS 285 (398)
T ss_pred cCC-------CCCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEeec--CC----CC-ChHHHHHH
Confidence 874 34556 565 699999999999999999999999999999999999643 22 11 23577999
Q ss_pred HHHHHHHcCCCCCCcceeecC
Q 018076 341 MTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 341 ~~~Al~~Agl~~~dId~ie~~ 361 (361)
|++||++||| ++|||||.-|
T Consensus 286 m~~AL~~Agl-~~~IdyI~ah 305 (398)
T PRK06519 286 LERLLKPAGG-LAAPTAVISG 305 (398)
T ss_pred HHHHHHHCCC-cccCCEEEeC
Confidence 9999999999 8999999864
|
|
| >COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=416.16 Aligned_cols=301 Identities=23% Similarity=0.374 Sum_probs=271.1
Q ss_pred ceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCC-ccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-
Q 018076 40 RVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNF-DRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW- 117 (361)
Q Consensus 40 ~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~- 117 (361)
.|+|+||+|++|+..++++||++|.+|++.|+++|..+|+.+.| ++++.. ..+...+.++++++ ...||+.+|
T Consensus 5 ~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~--~gk~~~~~ggfl~~---~~~FD~~fFg 79 (1061)
T COG3321 5 PIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTV--PGKSYSRWGGFLDD---VDDFDALFFG 79 (1061)
T ss_pred cEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCcccc--ccccccccccccCC---ccccCHHHcC
Confidence 39999999999999999999999999999999999999988876 666533 56778899999996 567999999
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
|+|+++..|||+++|+++.+++||+|||+.+..+. ..++|||+|.+..++....... .. ...++...+...+
T Consensus 80 isPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~-g~~tgV~~g~~~~~y~~~~~~~------~~-~~~~~~~~g~~~~ 151 (1061)
T COG3321 80 ISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLR-GSATGVFAGASVADYLLLLLAD------DE-AEPEYAITGNSSS 151 (1061)
T ss_pred CCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccC-CcceEEEEeeccCccccccccc------cc-cccceecccchhh
Confidence 99999999999999999999999999999998885 6899999999876654332111 11 3455666677788
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
..+++||+.|+|+||+++|+++|+|++.|+++|++.|+.|+||++|+||++..++|.....|++.++|+ +++.|
T Consensus 152 ~~a~Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls------~~g~c 225 (1061)
T COG3321 152 VAAGRISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS------PDGRC 225 (1061)
T ss_pred HHHHHHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcC------CCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 77999
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC--CCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
++||.++|||+.|||++++||++.++|+++|++||++|+|.+.++||. +++.|++ .++...+++||++|||+|++|
T Consensus 226 ~~fd~~adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~--~aQ~~v~~~al~~a~i~p~tv 303 (1061)
T COG3321 226 KAFDADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNL--EAQADVIREALADAGIDPATV 303 (1061)
T ss_pred eecccCCCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCH--HHHHHHHHHHHHhcCCCcccC
Confidence 999999999999999999999999999999999999999999999995 4666665 566999999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
+|||-|
T Consensus 304 ~yvEaH 309 (1061)
T COG3321 304 QYVEAH 309 (1061)
T ss_pred cEEEec
Confidence 999976
|
|
| >cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-46 Score=365.20 Aligned_cols=304 Identities=21% Similarity=0.382 Sum_probs=261.5
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW- 117 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~- 117 (361)
++|+|||||+++|.|.+.++||++|++|++++.+++..+|....|.++... ........++++++ ...||...|
T Consensus 1 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~i~~---~~~~~~~~~~ 75 (421)
T cd00833 1 EPIAIVGMACRFPGAADPDEFWENLLEGRDAISEIPEDRWDADGYYPDPGK--PGKTYTRRGGFLDD---VDAFDAAFFG 75 (421)
T ss_pred CCEEEEceeeECCCCCCHHHHHHHHHcCCCcCcCCChhHcCcccccccccc--CCCcceecceecCC---cccCCHhHcC
Confidence 369999999999999999999999999999999998777655443221111 23445667788875 344777777
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.+.+++.++|++.++.+||+|||++..+++ ..++||++|+..+.+ ..+.......+.++.+.+.+.+
T Consensus 76 ~~~~~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~-~~~~gv~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 147 (421)
T cd00833 76 ISPREAEAMDPQQRLLLEVAWEALEDAGYSPESLA-GSRTGVFVGASSSDY-------LELLARDPDEIDAYAATGTSRA 147 (421)
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCchhcC-CCCceEEeCcCHHHH-------HHHHhhcccccCcccccCcchH
Confidence 88999999999999999999999999999887764 889999999876522 2222333345678888888889
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
..+++++..||++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|..++.++ +...+
T Consensus 148 ~~a~~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~------~~~~~ 221 (421)
T cd00833 148 FLANRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS------PDGRC 221 (421)
T ss_pred HHHHHHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCC------CCCCC
Confidence 999999999999999999999999999999999999999999999999999878888889999998887 55689
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|||.+++|+++||||+++||+++++|+++|+++|++|.|++.++++.+.....+.+.++.++|++||++||++++||||
T Consensus 222 ~pf~~~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~ 301 (421)
T cd00833 222 RPFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSAVNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDY 301 (421)
T ss_pred CCCCCCCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEEEcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcE
Confidence 99999999999999999999999999999999999999999999998766555567888899999999999999999999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||.|
T Consensus 302 i~~h 305 (421)
T cd00833 302 VEAH 305 (421)
T ss_pred EEee
Confidence 9986
|
PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. |
| >smart00825 PKS_KS Beta-ketoacyl synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-46 Score=366.36 Aligned_cols=304 Identities=21% Similarity=0.330 Sum_probs=260.3
Q ss_pred eEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-CC
Q 018076 41 VVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LN 119 (361)
Q Consensus 41 v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~-~~ 119 (361)
|+|||||+++|.|.+.++||++|.+|++++.+++..+|....|..+.............++++++ ...||+..| ++
T Consensus 1 v~ItG~g~~~p~g~~~~~~~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~d~~~~~i~ 77 (424)
T smart00825 1 IAIVGMSCRFPGADSPEEFWDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDD---VDLFDAAFFGIS 77 (424)
T ss_pred CEEEEEEeeCCCCCCHHHHHHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCc---hhhCCHhHcCCC
Confidence 68999999999999999999999999999999987666555442221111012235566777754 234888888 89
Q ss_pred chhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHH
Q 018076 120 SKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMA 199 (361)
Q Consensus 120 ~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (361)
+++.+++++.++|++.++.+||+|||+++.+++ ..+++|++|++.++ +..+....+..+.++.+++.+.+..
T Consensus 78 ~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~id-~~~~gv~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (424)
T smart00825 78 PREAEAMDPQQRLLLEVAWEALEDAGIDPESLR-GSRTGVFVGAMSSD-------YAELLARDPEDIEGYAATGTARSFI 149 (424)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHcCCChhHcC-CCCCEEEEEEcHHH-------HHHHHhhCccccchhhhccchhHHH
Confidence 999999999999999999999999999887774 78999999986543 2233344556677888888888999
Q ss_pred HHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcC
Q 018076 200 SGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP 279 (361)
Q Consensus 200 a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~p 279 (361)
+++|+..||++||+++++++|+|++.||..|+++|++|++|++||+|+|...++..+..|..++.++ ++..++|
T Consensus 150 a~~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~------~~~~~~p 223 (424)
T smart00825 150 ANRISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLS------PDGRCKT 223 (424)
T ss_pred HHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCC------CCCCCCC
Confidence 9999999999999999999999999999999999999999999999999888888889999888887 5678999
Q ss_pred CCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceee
Q 018076 280 FDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLS 359 (361)
Q Consensus 280 fd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie 359 (361)
||.+++|+++||||+++||+++++|+++|+++|++|.|++.++++.+.....+.+..+..+|++||+++||+++|||||+
T Consensus 224 f~~~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~ 303 (424)
T smart00825 224 FDADADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSAVNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVE 303 (424)
T ss_pred CCCCCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEEEeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEE
Confidence 99999999999999999999999999999999999999999999887555556678889999999999999999999999
Q ss_pred cC
Q 018076 360 IQ 361 (361)
Q Consensus 360 ~~ 361 (361)
.|
T Consensus 304 ~h 305 (424)
T smart00825 304 AH 305 (424)
T ss_pred ee
Confidence 76
|
The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. |
| >PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-45 Score=353.39 Aligned_cols=292 Identities=32% Similarity=0.411 Sum_probs=245.0
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
.+|+|||+|+++|.|.+.++||++|++|+++|.+++.++ ...+..++++.++. |+. .
T Consensus 11 ~~VvITG~G~vs~~G~~~~~~~~~L~~G~s~i~~~~~~~--------------~~~~~~~~~g~~~~------~~~-~-- 67 (425)
T PRK06501 11 PIVAVTGMGVVTSLGQGKADNWAALTAGESGIHTITRFP--------------TEGLRTRIAGTVDF------LPE-S-- 67 (425)
T ss_pred cCEEEEeeeEECCCCCCHHHHHHHHHcCCCceEcCCccc--------------ccCCCCceEEEEee------ccc-c--
Confidence 469999999999999999999999999999999987754 44566788888863 222 1
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCC-------------CCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCC
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQ-------------GQKERTGVSIGGGIGSISDTVDAAQMICEKRLRR 185 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~-------------~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~ 185 (361)
....+++..++++.++++||+|||+...+. ....+++++.++...... .+..+......+
T Consensus 68 ---~~~~~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 140 (425)
T PRK06501 68 ---PFGASALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAP----SYDRLLRAARGG 140 (425)
T ss_pred ---cccccCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHH----HHHHHHhhcCcc
Confidence 122456788899999999999999953221 124678888887654432 233334333333
Q ss_pred CCCcchhhhhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccc
Q 018076 186 LSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRAL 265 (361)
Q Consensus 186 ~~~~~~~~~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~l 265 (361)
..+.++...+.+.++++|+..|+++||+++|+++|+|++.||..|+++|++|++|++||+|+|..+++..+..|..++.+
T Consensus 141 ~~~~~~~~~~~~~~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~l 220 (425)
T PRK06501 141 RFDALHERFQFGSIADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSAL 220 (425)
T ss_pred cCChhhhhhcccHHHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhcc
Confidence 34445677777889999999999999999999999999999999999999999999999999988999999999999988
Q ss_pred cccCCCCCCCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHH
Q 018076 266 TTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRAL 345 (361)
Q Consensus 266 s~~~~~~~~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al 345 (361)
+.. .+.++..++|||.+++|+++|||++++|||++++|+++|++||++|.|++.++|++|.+.+.+++..+.++|++||
T Consensus 221 s~~-~~~~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~AL 299 (425)
T PRK06501 221 STQ-NDPPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAAL 299 (425)
T ss_pred ccC-CCCCCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHH
Confidence 753 3346778999999999999999999999999999999999999999999999999998888888889999999999
Q ss_pred HHcCCCCCCcceeecC
Q 018076 346 KQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 346 ~~Agl~~~dId~ie~~ 361 (361)
+++|++|+|||||+.|
T Consensus 300 ~~agi~p~dId~i~~H 315 (425)
T PRK06501 300 ADAGLTPEQIDYINAH 315 (425)
T ss_pred HHcCCCHHHcCEEEec
Confidence 9999999999999976
|
|
| >PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-44 Score=335.38 Aligned_cols=232 Identities=47% Similarity=0.751 Sum_probs=219.4
Q ss_pred cCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHH
Q 018076 126 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 205 (361)
Q Consensus 126 ~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 205 (361)
+++..+|++.++++||++||+.. +..|+||++|++.++...+++.++.+...+++.++|+.++..++|+++++|+.
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~~----~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~ 76 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNTE----KQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSI 76 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCC----CcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHH
Confidence 46789999999999999999862 47899999999999999999988888888888899999999999999999999
Q ss_pred HcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 206 KYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 206 ~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
.|+++||+++++++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++...+.+|+..|+|||.+++
T Consensus 77 ~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~ 156 (342)
T PRK14691 77 KHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD 156 (342)
T ss_pred HhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999899999999999999986556668889999999999
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
||++||||+++|||++++|+++|.++|++|+|++.++|+.+++.|.+.+.+..++|++||+++||+|+||||||.|
T Consensus 157 G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dIdyIeaH 232 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEHALARGAKPLAEIVGYGTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAH 232 (342)
T ss_pred CccccceEEEEEEeeHHHHHhCCCCceEEEEEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 9999999999999999999999999999999999999999998888889999999999999999999999999986
|
|
| >PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=332.34 Aligned_cols=282 Identities=26% Similarity=0.362 Sum_probs=233.5
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCC-CceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGE-CGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
|++|||||+|+++|.|.+.++||++|++|+ ++|.+++.++ . .++. ..+.+++ |+. .
T Consensus 1 m~~VvITG~G~vsp~G~~~~~~~~~l~~G~~sgi~~~~~~~--------------~-~~~~-~~g~~~~------~~~-~ 57 (392)
T PRK09185 1 MTPVYISAFGATSALGRGLDAILAALRAGRASGMRPCDFWL--------------V-DLPT-WVGEVVG------VEL-P 57 (392)
T ss_pred CCcEEEEeeEEECCCcCCHHHHHHHHHcCCCCCeEeCcccc--------------c-cCCe-EEEEecC------ccc-c
Confidence 568999999999999999999999999999 9999887643 1 1222 2355654 542 3
Q ss_pred CCCchhhcccCHHHHHHHHHHHH---HHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhh
Q 018076 117 WLNSKDHRSIARFIAYALCAADE---ALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR 193 (361)
Q Consensus 117 ~~~~~~~~~~~~~~~l~l~a~~~---Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (361)
+++.+..+.+++..++++.++.+ ++.+++ .+. +..++||++|++.++....+..+..+.........++.++.
T Consensus 58 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~---~~~-~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (392)
T PRK09185 58 ALPAALAAFDCRNNRLALLALQQIEPAVEAAI---ARY-GADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQ 133 (392)
T ss_pred cCCHHHHhcCCHHHHHHHHHHHHHHHHHHhhc---ccC-CCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhh
Confidence 35666677788888887777766 555554 122 36799999999999998888777664433222234566778
Q ss_pred hhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCC
Q 018076 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (361)
Q Consensus 194 ~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~ 273 (361)
.+.+.++++|+..||++||+++++++|+|++.||..|+++|++|++|.|||+|+|. +++..+..|..++.++.
T Consensus 134 ~~~~~~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l~~------ 206 (392)
T PRK09185 134 QELGSLADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLSP------ 206 (392)
T ss_pred hcccHHHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhccccCC------
Confidence 88899999999999999999999999999999999999999999999999999997 67777788888887764
Q ss_pred CCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 274 ~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
..++|||.+++|+++|||++++|||++ ++.+ ++|.|++.++|+.++..|++.+.++.++|++||++|||+|+
T Consensus 207 -~~~~Pfd~~~~G~~~gEGaa~vVLe~~-----~~~~--~~I~g~g~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~ 278 (392)
T PRK09185 207 -QPCRPFSANRDGINIGEAAAFFLLERE-----DDAA--VALLGVGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPA 278 (392)
T ss_pred -CccCCCcCCCCccceeceEEEEEEEEc-----CCCc--EEEEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 579999999999999999999999987 2333 57999999999999988999999999999999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
||||||.|
T Consensus 279 dId~v~~h 286 (392)
T PRK09185 279 DIGYINLH 286 (392)
T ss_pred HccEEEeC
Confidence 99999986
|
|
| >PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=317.81 Aligned_cols=250 Identities=37% Similarity=0.636 Sum_probs=193.1
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|++|||||+|+++|+|.+.++||++|.+|++++.+++. +|..+.|....... ....+...++.++ ...||...+
T Consensus 1 m~~V~ItG~g~~~p~g~~~~~~w~~L~~g~~~~~~~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~ 74 (254)
T PF00109_consen 1 MRRVVITGMGCVTPGGDGLEEFWEALLSGRSGIRPIPE-RWDPSDYYDPPSRV-AGEIDDKKGGFID----DFDFDAYFF 74 (254)
T ss_dssp -S-EEEEEEEEEBTTBSSHHHHHHHHHTT---EEESCS-SSCHTTSTTSSCSE-EECBSSSEESSST----TTCGGGTST
T ss_pred CCEEEEEEEEEECcCCCCHHHHHhhhccCceeeeeecc-ccccccccccCCcc-cccccccccceee----ecccccccc
Confidence 68999999999999999999999999999999999998 77766653111100 1122223333343 245777766
Q ss_pred -CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCC-cEEEEEeCCCCChHHHHHHHHHHHHhc--cCCCCCcchhh
Q 018076 118 -LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKE-RTGVSIGGGIGSISDTVDAAQMICEKR--LRRLSPFFIPR 193 (361)
Q Consensus 118 -~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~-~~gv~vg~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 193 (361)
+++++.++|+++++|++.++.+||+|||+....+. .. ++||++|++.++. +.+..+...+ +....|..+..
T Consensus 75 ~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~-~~~r~gv~~G~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~ 149 (254)
T PF00109_consen 75 GIPPREARRMDRQSRLALAAAREALEDAGLDPDDLD-GERRVGVFVGSSSGDY----EFYRALDEDGETPRDVSPWFVPN 149 (254)
T ss_dssp CHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHT-GGGTEEEEEEESSSHH----HHHHHHHHHTTCGGGSHTTHHHH
T ss_pred cccchhhhhhhhhhhHHHHHhhhhcccccccccccc-cccceeeccccccccc----cccccccccccccccccccccCc
Confidence 66777889999999999999999999999876543 44 5999999988832 4444444444 45566655666
Q ss_pred hhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCC
Q 018076 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (361)
Q Consensus 194 ~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~ 273 (361)
+++|.++++|++.||++||+++|+++|+||+.||..|+++|++|++|+|||||+|..+++..+..|..++.++.
T Consensus 150 ~~~~~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~------ 223 (254)
T PF00109_consen 150 TLPNSAAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSA------ 223 (254)
T ss_dssp HSTTHHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-T------
T ss_pred ccccccccchhhhcCCCCccccccccccccccccchhccccccccccccccccccccccccccccccccccccc------
Confidence 79999999999999999999999999999999999999999999999999999998899999999999998873
Q ss_pred CCCCcCCCCCCCcccccceeeeEeeCChhhH
Q 018076 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHA 304 (361)
Q Consensus 274 ~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A 304 (361)
++.++|||.+++|+++||||+++|||++++|
T Consensus 224 ~~~~~pf~~~~~G~v~gEGa~~~vLe~~~~A 254 (254)
T PF00109_consen 224 DGPCRPFDPFADGFVLGEGAGALVLERLEHA 254 (254)
T ss_dssp TSGGGSTBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred cccccccCCCCCCEEEECceEEEEEEEhhhC
Confidence 3689999999999999999999999999886
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B .... |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=309.56 Aligned_cols=290 Identities=19% Similarity=0.289 Sum_probs=253.4
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
++++|||+|+...+|...++++||++|++|.+-++.-+ .+|...-| ++|.+.+- +.+ ...||..+
T Consensus 9 ~~edIvIsG~sgklPes~nv~eF~~nLl~g~DmVtdd~-rrW~~G~y----------gLP~r~gK-lKd---L~kFDa~f 73 (2376)
T KOG1202|consen 9 KQEDIVISGMSGKLPESDNVKEFGDNLLAGVDMVTDDP-RRWEAGLY----------GLPKRSGK-LKD---LNKFDAGF 73 (2376)
T ss_pred cCCcEEEeccCCCCCCcccHHHHhhhhhcccccccCCc-cccccccc----------CCchhhcc-hhh---hhhhcccc
Confidence 36889999999999999999999999999987665444 35766644 34434332 322 45699999
Q ss_pred C-CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhh
Q 018076 117 W-LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (361)
Q Consensus 117 ~-~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (361)
| ..+++...|||+.+|++++.++|+-||||.+.++. ..++||++|.+..+.... +..++..+..+...+..
T Consensus 74 f~vh~KQa~~MDPq~RlLLE~t~EAivDaGiNP~~LR-Gs~tGv~vg~s~seTs~~-------~~~dp~t~~Gy~mtgc~ 145 (2376)
T KOG1202|consen 74 FGVHPKQANTMDPQLRLLLEATWEAIVDAGINPDDLR-GSRTGVFVGVSGSETSGA-------LSQDPDTVNGYSMTGCV 145 (2376)
T ss_pred cCcCcccccccCHHHHHHHHHHHHHHHhCCCChhhcC-cccceeEEeecCcccccc-------ccCCCccccceeecccH
Confidence 9 89999999999999999999999999999999996 999999999876654322 22345556777888899
Q ss_pred hhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCC
Q 018076 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (361)
Q Consensus 196 ~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 275 (361)
..+++++|++.|+++||++.++++|+|++.||..|++.|++|+||.+||+|++..+.|.....|.++|+++ |++
T Consensus 146 raMfaNRiSytFDfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls------~dG 219 (2376)
T KOG1202|consen 146 RAMFANRISYTFDFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLS------PDG 219 (2376)
T ss_pred HHHhhcceeEEEeccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcC------CCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 789
Q ss_pred CCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC---CCCCCCCCcHHHHHHHHHHHHHcCCCC
Q 018076 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQPHIDGKGAILAMTRALKQVVHNV 352 (361)
Q Consensus 276 ~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~p~~~g~~~~~a~~~Al~~Agl~~ 352 (361)
.|+.||...|||+++||+++++|.+...|+ ++||.|.-..++.||. +++.|+ |+-+...++..+.++||+|
T Consensus 220 sCkaFDeagnGY~Rseg~~avllqrk~~Ar----RvYAtilnartNTDGfKEqGvTfP~--G~~Q~qLi~e~Yse~Gl~P 293 (2376)
T KOG1202|consen 220 SCKAFDEAGNGYCRSEGVVAVLLQRKSLAR----RVYATILNARTNTDGFKEQGVTFPS--GDMQEQLIRETYSEAGLNP 293 (2376)
T ss_pred cccchhccCCceeecCceEEEEEehhHHHH----HHHHHhhccccCCCchhhcCccCCC--cHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999998886 4799999999999996 577775 6666899999999999999
Q ss_pred CCcceeecC
Q 018076 353 DGFEQLSIQ 361 (361)
Q Consensus 353 ~dId~ie~~ 361 (361)
++|-|||-|
T Consensus 294 ~sv~YvEAH 302 (2376)
T KOG1202|consen 294 ESVVYVEAH 302 (2376)
T ss_pred ccEEEEEec
Confidence 999999965
|
|
| >PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=251.32 Aligned_cols=256 Identities=18% Similarity=0.201 Sum_probs=190.3
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
||++|+|+|+|+++|+|.+.++.|+++++|.+........+ ....+.......+.
T Consensus 1 ~~~~v~I~~~g~vs~lG~~~~~~~aa~ragi~~~~~~~~~~--------------~~~~~~i~~~~~~~----------- 55 (348)
T PRK06147 1 MMRALAIVGSGMVTAVGLDAPSSCAAIRARLDNFQETRFID--------------PPGGEWLIGAPVPL----------- 55 (348)
T ss_pred CCCceEEEecceeecCcCCHHHHHHHHHccccccccccccc--------------CCCCCceEeecCcC-----------
Confidence 57889999999999999999999999999987654333221 00000011111111
Q ss_pred CCCchhhcccCHHHHHHHHHHHHHHHHCC-CCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhh
Q 018076 117 WLNSKDHRSIARFIAYALCAADEALHDAK-WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (361)
Q Consensus 117 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg-~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (361)
.+ ......+..+|+..|+++||++++ +. ..++.++++.+..+. ...+..+
T Consensus 56 --~~-~~~~~~r~~~La~~Al~~aL~~a~~~~------~~~i~lil~~~~~~~----------------~~~~~~~---- 106 (348)
T PRK06147 56 --PP-PWRGPERLAEMAAPAIAEALEGLPALD------ASEAPLLLCVAEEER----------------PGRPPDL---- 106 (348)
T ss_pred --Cc-ccCchHHHHHHHHHHHHHHHHhccccc------ccCCcEEEEeCchhc----------------CCCCcch----
Confidence 11 122345778999999999999998 33 344577777543210 0111111
Q ss_pred hhHHHHHHHHHcCC--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCC
Q 018076 196 INMASGHVSMKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (361)
Q Consensus 196 ~~~~a~~is~~lgl--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~ 273 (361)
...++..++..+|+ ++++++|.++|+|+++||..|+++|++|++|.+||||+|....+..+..|...+.+..
T Consensus 107 ~~~~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~------ 180 (348)
T PRK06147 107 EERLLRELEARLGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT------ 180 (348)
T ss_pred HHHHHHHHHHHhCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC------
Confidence 12234567777777 5788999999999999999999999999999999999999888888888887766652
Q ss_pred CCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCC-CCCCcHHHHHHHHHHHHHcCCCC
Q 018076 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQ-PHIDGKGAILAMTRALKQVVHNV 352 (361)
Q Consensus 274 ~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~-p~~~g~~~~~a~~~Al~~Agl~~ 352 (361)
+.+++||++||||+++|||+.++|++++++||+ .|++...++.|.+. +.+.++++.++|++||+++|++|
T Consensus 181 -------~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a--~g~~~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~ 251 (348)
T PRK06147 181 -------SQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LGLGREPAPVGESEDLPLRGDGLTQAIRAALAEAGCGL 251 (348)
T ss_pred -------CCCCCceeeeceEEEEEEccHhhhhcCCCceEE--EEEeecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCH
Confidence 236899999999999999999999999999998 67777776654442 22368899999999999999999
Q ss_pred CCcceeecC
Q 018076 353 DGFEQLSIQ 361 (361)
Q Consensus 353 ~dId~ie~~ 361 (361)
+|||||..|
T Consensus 252 ~dId~v~ah 260 (348)
T PRK06147 252 EDMDYRIAD 260 (348)
T ss_pred HHCCEEEcC
Confidence 999999865
|
|
| >cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-28 Score=227.81 Aligned_cols=221 Identities=33% Similarity=0.483 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|++.++++||++||++..... .+..+|++|++.+..... ...........|+.+.+.+.+..+++|+..+|
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~-~~i~~ii~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg 84 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQK-NPIVGVVVGTGGGSPRFQ-----VFGADAMRAVGPYVVTKAMFPGASGQIATPLG 84 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccC-CCCEEEEEEeCCccHHHH-----hhhhccccccCcchhhcccchHHHHHHHHHhC
Confidence 578999999999999999843321 455699999987665322 22334455678888999999999999999999
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCccc
Q 018076 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288 (361)
Q Consensus 209 l~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v 288 (361)
++||+++++.+|+|++.||.+|.++|++|++|.+||+++|....+.... +...+.+.. |+..++||+...+|++
T Consensus 85 l~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~g~~ 158 (332)
T cd00825 85 IHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCE-FDAMGALST-----PEKASRTFDAAADGFV 158 (332)
T ss_pred CCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHH-HHhhccccC-----CCCCCCCCCCCCCCEE
Confidence 9999999999999999999999999999999999999999865555433 333333322 6678899999999999
Q ss_pred ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 289 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 289 ~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+|||++++||++++.|++++.+++++|.|.+..+++.+...+.+....+.++++++|+++|++++|||+++.|
T Consensus 159 ~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~h 231 (332)
T cd00825 159 FGDGAGALVVEELEHALARGAHIYAEIVGTAATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAH 231 (332)
T ss_pred EEeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEEcc
Confidence 9999999999999999999999999999999998877655555567888999999999999999999999876
|
Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). |
| >cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=177.64 Aligned_cols=164 Identities=30% Similarity=0.443 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+++.+||+++|+++++++ ++++++..++.. .+..+.+|+..+|
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~-----~li~~~~~~~~~--------------------------~~~~a~~i~~~lg 55 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIV-----GVIVGTTGGSGE--------------------------FSGAAGQLAYHLG 55 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCce-----EEEEEECCCCcc--------------------------ccHHHHHHHHHhC
Confidence 568999999999999999877766 999998654321 3566788999999
Q ss_pred C-CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 F-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l-~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+ ++++++|+.+|+|++.||.+|+++|++|++|.+||+++|. +
T Consensus 56 ~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------------------~ 98 (254)
T cd00327 56 ISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------------------F 98 (254)
T ss_pred CCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------------------e
Confidence 9 8999999999999999999999999999999999999985 4
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
++||||+++||++++.+.+++.+++++|.++....++.+.. +.+..+.+.++++++|+++|++++|||+|++|
T Consensus 99 ~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h 171 (254)
T cd00327 99 VFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAH 171 (254)
T ss_pred eecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEcc
Confidence 68999999999999999999999999999998877765432 23456788999999999999999999999986
|
Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. |
| >PRK05656 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-20 Score=177.18 Aligned_cols=196 Identities=21% Similarity=0.329 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+++|+++++++ .|++|+..... ..++ ++..++..+|+
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID-----~vi~g~~~~~~-------------------------~~~~-~a~~va~~lGl 75 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD-----EVILGQVLTAG-------------------------AGQN-PARQAAIKAGL 75 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEecCCC-------------------------CCCc-HHHHHHHHcCC
Confidence 57899999999999999998887 89998743110 0112 44568888998
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH---------------HHHHH------hh----
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL---------------SMAGF------CK---- 261 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~---------------~~~~~------~~---- 261 (361)
. -|+++|+++|+|++.||..|+++|++|.+|++||+|+|.... |+ .+..+ ..
T Consensus 76 ~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (393)
T PRK05656 76 PHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMITDGLWDAFNDY 155 (393)
T ss_pred CCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhccccccccccCC
Confidence 6 489999999999999999999999999999999999985322 11 00000 00
Q ss_pred -cccccc----cCC-------------------CCCCCCCc----CCCC-------------------------------
Q 018076 262 -SRALTT----KYN-------------------GTPQEASR----PFDC------------------------------- 282 (361)
Q Consensus 262 -~~~ls~----~~~-------------------~~~~~~~~----pfd~------------------------------- 282 (361)
++..++ +|+ .+|.+..+ |+..
T Consensus 156 ~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~ 235 (393)
T PRK05656 156 HMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGTTAESLAKLKPA 235 (393)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCCCHHHHhcCCCC
Confidence 000000 011 01111110 1100
Q ss_pred -CCCccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 283 -GRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 283 -~~~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
..+|.+ ++|||+++||++++.|+++|.+++++|.|++.... .|.+.+.+...++++||++|||+|+|
T Consensus 236 ~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~d 310 (393)
T PRK05656 236 FKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYANAGV-----DPAIMGIGPVSATRRCLDKAGWSLAE 310 (393)
T ss_pred cCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecC-----CCcccchhHHHHHHHHHHHcCCCHHH
Confidence 023445 89999999999999999999999999999988753 45555667789999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
||++|+|
T Consensus 311 Id~~e~~ 317 (393)
T PRK05656 311 LDLIEAN 317 (393)
T ss_pred CCEEEec
Confidence 9999986
|
|
| >PRK07108 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-19 Score=172.36 Aligned_cols=198 Identities=20% Similarity=0.293 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+++++||+++|+++++++ .|++|+...+. . .+..++..++..+|
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID-----~vi~G~~~~~~----------------------~---~~~~~a~~i~~~lG 76 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVE-----DVIMGCANPEG----------------------A---TGANIARQIALRAG 76 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----cEEEEEeeccc----------------------c---cccHHHHHHHHHcC
Confidence 367999999999999999988887 78998743211 0 01236667888888
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH---------HHH------Hhhccc----cc
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS---------MAG------FCKSRA----LT 266 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~---------~~~------~~~~~~----ls 266 (361)
+. .|+++|+++|+||+.||..|+++|++|++|++||+|+|.... |.. ... +..++. +.
T Consensus 77 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~a 156 (392)
T PRK07108 77 LPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYWSMLQTAENVA 156 (392)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCccccCHHHHHHHHH
Confidence 85 699999999999999999999999999999999999996322 100 000 000000 00
Q ss_pred ccCC---------------------------------------CCCCCC--------------------------Cc-CC
Q 018076 267 TKYN---------------------------------------GTPQEA--------------------------SR-PF 280 (361)
Q Consensus 267 ~~~~---------------------------------------~~~~~~--------------------------~~-pf 280 (361)
..++ .+|... .+ +|
T Consensus 157 ~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~e~l~~l~~~~ 236 (392)
T PRK07108 157 KRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTLEGVSKIRSAL 236 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCHHHHhcCCCCC
Confidence 0010 012110 11 12
Q ss_pred C----CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 281 D----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 281 d----~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
. ...|...++|||+++||++++.|++++.+++++|+|++...+ .|++.+.+...++++||++|||+|+|||
T Consensus 237 ~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~~~~~-----~~~~~~~~~~~a~~~al~~agl~~~Did 311 (392)
T PRK07108 237 PGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGC-----EPDEMGIGPVFAVPKLLKQAGLKVDDID 311 (392)
T ss_pred CCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecc-----CCcccchhHHHHHHHHHHHcCCCHHHcC
Confidence 1 112444489999999999999999999999999999998864 2444555668999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
++|+|
T Consensus 312 ~~ei~ 316 (392)
T PRK07108 312 LWELN 316 (392)
T ss_pred chHhh
Confidence 99986
|
|
| >PRK06064 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.7e-19 Score=171.33 Aligned_cols=202 Identities=20% Similarity=0.244 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+++++||+++|+++++++ ++++|+..++... . ....+..++..+|
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id-----~vi~g~~~~~~~~----------------------~--~~~~a~~va~~lG 72 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID-----AMYVGNMSAGLFV----------------------S--QEHIAALIADYAG 72 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccccc----------------------c--cccHHHHHHHHcC
Confidence 367899999999999999988877 8888874322110 0 0124567888899
Q ss_pred CC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH-HHH-H--------Hh---------hcccccc
Q 018076 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL-SMA-G--------FC---------KSRALTT 267 (361)
Q Consensus 209 l~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~-~~~-~--------~~---------~~~~ls~ 267 (361)
++ +|+++|+++|+|++.||..|+++|++|++|++||+|.|.... +. ... . |. ..+.+.+
T Consensus 73 l~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (389)
T PRK06064 73 LAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGATFPGLYALIAR 152 (389)
T ss_pred CCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCchHHHHHHHHH
Confidence 97 699999999999999999999999999999999999975211 10 000 0 00 0000000
Q ss_pred ----cCC------------------CCCCCC----------------CcCCCCCCCcccccceeeeEeeCChhhHHhcCC
Q 018076 268 ----KYN------------------GTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309 (361)
Q Consensus 268 ----~~~------------------~~~~~~----------------~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~ 309 (361)
+|+ .+|... +.|+. .-|...++|||+++||++++.|++++.
T Consensus 153 ~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~s~~~A~~~~~ 231 (389)
T PRK06064 153 RYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILASEEKAKEYTD 231 (389)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEecHHHHHHhcC
Confidence 011 112111 11221 235667899999999999999999876
Q ss_pred eeeEEEEEEEeecCCCCCCC-CC-CCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 310 KIYAEVRGYGMSGDAHHITQ-PH-IDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 310 ~~~a~i~g~~~~~d~~~~~~-p~-~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
++ ++|.|++..++..++.. ++ ....+...++++||++|||+++|||++|+|
T Consensus 232 ~~-v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~ 284 (389)
T PRK06064 232 TP-VWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVH 284 (389)
T ss_pred CC-eEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 65 69999999988776543 22 234566789999999999999999999986
|
|
| >cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.3e-19 Score=168.64 Aligned_cols=197 Identities=24% Similarity=0.360 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ ++++|+..+.. . ....+..++..+|
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID-----~vi~~~~~~~~---------------------~-----~~~~a~~v~~~lG 70 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD-----DVIMGNVLQAG---------------------E-----GQNPARQAALLAG 70 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEeccCCC---------------------C-----CChHHHHHHHHcC
Confidence 468999999999999999988887 88888643211 0 0123446888899
Q ss_pred CCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH-----HH---------hhcc--------
Q 018076 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA-----GF---------CKSR-------- 263 (361)
Q Consensus 209 l~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~-----~~---------~~~~-------- 263 (361)
+.. |++.|+++|+|++.+|..|+.+|++|.+|+|||+|+|.... +.... .+ ...+
T Consensus 71 l~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (386)
T cd00751 71 LPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLDDGLTDPFTGL 150 (386)
T ss_pred CCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccccccccccCCC
Confidence 974 89999999999999999999999999999999999875211 10000 00 0000
Q ss_pred ---ccccc----CC--------------------CCC-----------------------CCCCc------------C-C
Q 018076 264 ---ALTTK----YN--------------------GTP-----------------------QEASR------------P-F 280 (361)
Q Consensus 264 ---~ls~~----~~--------------------~~~-----------------------~~~~~------------p-f 280 (361)
..+++ |+ .+| ....+ | |
T Consensus 151 ~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~e~v~~s~~i~ 230 (386)
T cd00751 151 SMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTLEKLAKLKPAF 230 (386)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCCCc
Confidence 00110 10 000 10111 1 1
Q ss_pred C-----CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 281 D-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 281 d-----~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
+ ...|...++|||+++||++++.|++++.+++++|.|++.+++... ....+...++++||++|||+|+||
T Consensus 231 ~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~~~~~~~~-----~~~~~~~~a~~~a~~~Agi~~~di 305 (386)
T cd00751 231 KKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYAVAGVDPA-----IMGIGPVPAIPKALKRAGLTLDDI 305 (386)
T ss_pred CCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEEEccCCCc-----ccchhHHHHHHHHHHHcCCCHHHc
Confidence 1 123455579999999999999999999999999999999876432 233455799999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
|++|+|
T Consensus 306 d~~e~~ 311 (386)
T cd00751 306 DLIEIN 311 (386)
T ss_pred CEEEee
Confidence 999986
|
They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK09051 beta-ketothiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=8.9e-19 Score=168.12 Aligned_cols=197 Identities=26% Similarity=0.342 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+++|+++++++ .|++|+..... ......+..++...|+
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID-----~vi~g~~~~~~-------------------------~~~~~~a~~~~~~~Gl 77 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG-----HVVFGHVIPTE-------------------------PRDMYLSRVAAINAGV 77 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-----EEEEeeecccc-------------------------CCCccHHHHHHHHcCC
Confidence 57899999999999999988887 88998743211 0001123335566687
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH---------------HHH----HHhh------
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL---------------SMA----GFCK------ 261 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~---------------~~~----~~~~------ 261 (361)
. -|+++|+++|+||+.|+..|+++|++|.+|++||+|+|.... |. ... .+..
T Consensus 78 ~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (394)
T PRK09051 78 PQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMVGALHDPFGTIH 157 (394)
T ss_pred CCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhcccccccccCCC
Confidence 4 599999999999999999999999999999999999996332 11 000 0000
Q ss_pred cccccc----cCC------------------C-------------------------CCCCCCc------------CCCC
Q 018076 262 SRALTT----KYN------------------G-------------------------TPQEASR------------PFDC 282 (361)
Q Consensus 262 ~~~ls~----~~~------------------~-------------------------~~~~~~~------------pfd~ 282 (361)
++..++ +|+ . +|+...| |+..
T Consensus 158 ~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~e~v~~~~~v~~ 237 (394)
T PRK09051 158 MGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTLEDLAKLKPVFK 237 (394)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCHHHHcCCCCccc
Confidence 000000 011 0 2332222 3221
Q ss_pred C-------CCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 283 G-------RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 283 ~-------~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
. .+...++|||+++||++++.|+++|.+++++|.|++..... |...+.+...++++||++|||+|+||
T Consensus 238 ~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~agi~~~di 312 (394)
T PRK09051 238 KENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYAHAGVD-----PEYMGIGPVPATQKALERAGLTVADL 312 (394)
T ss_pred CCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CCcccccHHHHHHHHHHHcCCCHHHc
Confidence 1 12233689999999999999999999999999999988642 33344566899999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
|+||+|
T Consensus 313 d~~ei~ 318 (394)
T PRK09051 313 DVIEAN 318 (394)
T ss_pred CEEEec
Confidence 999997
|
|
| >PRK12578 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.2e-19 Score=168.28 Aligned_cols=201 Identities=20% Similarity=0.176 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+++++||+|||+++++++ ++++|+..... . ...++..++..+|
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID-----~vi~g~~~~~~--------------------~------~~~~a~~v~~~lG 69 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE-----LVVVGSTAYRG--------------------I------ELYPAPIVAEYSG 69 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc--------------------c------cCChHHHHHHHhC
Confidence 357999999999999999998887 88988743110 0 0112456888899
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH---H--------HHh--hcc--------ccc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---A--------GFC--KSR--------ALT 266 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~---~--------~~~--~~~--------~ls 266 (361)
+++ +.++|+++|+|++.||..|+++|++|.+|++||+|+|........ . .+. ..+ ...
T Consensus 70 l~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~a 149 (385)
T PRK12578 70 LTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGTTFPTYYALYA 149 (385)
T ss_pred CCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCCChHHHHHHHH
Confidence 976 678999999999999999999999999999999999862211000 0 000 000 001
Q ss_pred cc----CC------------------CCCCCCC----------------cCCCCCCCcccccceeeeEeeCChhhHHhcC
Q 018076 267 TK----YN------------------GTPQEAS----------------RPFDCGRDGFVIGEGSGVLVLEELEHAKKRG 308 (361)
Q Consensus 267 ~~----~~------------------~~~~~~~----------------~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g 308 (361)
++ |+ .+|.... .|+ ..-+...++|||+++||++++.|++.+
T Consensus 150 ~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl-~~~d~~~~~DGAaA~vl~s~e~A~~l~ 228 (385)
T PRK12578 150 TRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPI-KLLDSCPISDGSATAIFASEEKVKELK 228 (385)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCc-cHhhcCCcCCCeEEEEEecHHHHHhcC
Confidence 11 11 1222111 122 124556689999999999999999888
Q ss_pred CeeeEEEEEEEeecCCCCCC-CCCCCc-HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 309 AKIYAEVRGYGMSGDAHHIT-QPHIDG-KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 309 ~~~~a~i~g~~~~~d~~~~~-~p~~~g-~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
.+++++|.|++..++..++. .|+... .+...++++||++|||+|+|||++|+|
T Consensus 229 ~~~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~ 283 (385)
T PRK12578 229 IDSPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVH 283 (385)
T ss_pred CCCCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 66778999999988766543 233333 356789999999999999999999986
|
|
| >PRK06633 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.4e-19 Score=168.46 Aligned_cols=196 Identities=22% Similarity=0.299 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.++++++|+++|+++++++ .|++|+..... .....+..++...|+
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id-----~vv~G~~~~~~--------------------------~g~~~~r~~~~~~Gl 76 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVN-----EVILGQVITGG--------------------------SGQNPARQTLIHAGI 76 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCccc--------------------------cccHHHHHHHHHCCC
Confidence 56889999999999999988888 89999743211 012334456677888
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCC-ChHH-H-------------H--HHhhc--------
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI-DALS-M-------------A--GFCKS-------- 262 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~-~-------------~--~~~~~-------- 262 (361)
. =|+++|+++|+||+.|+..|+++|++|.+|++||+|+|... .|.. . . .+...
T Consensus 77 ~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (392)
T PRK06633 77 PKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQYDGLTDVFSGVF 156 (392)
T ss_pred CCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcccccccccCcch
Confidence 5 39999999999999999999999999999999999999633 2210 0 0 00000
Q ss_pred -cccccc----CC------------------CCCCCC-C------------------------------------cC-CC
Q 018076 263 -RALTTK----YN------------------GTPQEA-S------------------------------------RP-FD 281 (361)
Q Consensus 263 -~~ls~~----~~------------------~~~~~~-~------------------------------------~p-fd 281 (361)
+..+++ |+ .+|... . +| |+
T Consensus 157 ~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~~~ 236 (392)
T PRK06633 157 MGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSLEILSKLRPAFD 236 (392)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCHHHHccCCCccC
Confidence 000000 11 011100 0 11 21
Q ss_pred C-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 282 C-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 282 ~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
. ..|...++|||+++||++++.|++++.+++++|+|++...+. |...+.+...++++||++|||+|+|||
T Consensus 237 ~~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~Al~~AGl~p~DID 311 (392)
T PRK06633 237 KNGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYASAGVD-----PSIMGTAPVPASQKALSKAGWSVNDLE 311 (392)
T ss_pred CCCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEEEecCC-----cchhchHHHHHHHHHHHHcCCCHHHcC
Confidence 1 012245899999999999999999999999999999988642 223345568899999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
++|+|
T Consensus 312 ~~ei~ 316 (392)
T PRK06633 312 VIEVN 316 (392)
T ss_pred eeehh
Confidence 99986
|
|
| >PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-18 Score=163.50 Aligned_cols=179 Identities=16% Similarity=0.149 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
....|+..|+++||+++|+++++++ .+++++.... +.+ ...+..++..+
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id-----~li~~~~~~~---------------------~~~-----p~~a~~v~~~L 142 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID-----AVIVACSNMQ---------------------RAY-----PAMAIEIQQAL 142 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC---------------------CCC-----cHHHHHHHHhc
Confidence 3467999999999999999988776 7888764211 011 12346788999
Q ss_pred CCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 208 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 208 gl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
|+++++++++.+|+|++.||..|.++|++|.+|.+||+++|. .+... . |.....++
T Consensus 143 gl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~-~s~~~----------------------~-~~d~~~~~ 198 (372)
T PRK07515 143 GIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEI-CSGHL----------------------N-FRDRDSHF 198 (372)
T ss_pred CCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeec-ccccc----------------------c-ccCCCCCE
Confidence 999999999999999999999999999999999999999986 11110 0 12233589
Q ss_pred cccceeeeEeeCChhhHHhcC-CeeeEEEEEE------------EeecCCCCCCCCCC----CcHH--------HHHHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRG-AKIYAEVRGY------------GMSGDAHHITQPHI----DGKG--------AILAMT 342 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g-~~~~a~i~g~------------~~~~d~~~~~~p~~----~g~~--------~~~a~~ 342 (361)
++||||+++||++.+.+..++ ..+++..... ....+..+...+.. ++.. +.++|+
T Consensus 199 lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~ 278 (372)
T PRK07515 199 IFGDVATAVIVERADTATSAGGFEILGTRLFTQFSNNIRNNFGFLNRADPEGIGARDKLFVQEGRKVFKEVCPMVAEHIV 278 (372)
T ss_pred EecCccEEEEEeeccccccCCCceEEEEEeecccccceecCCCCCCCCCccccccccceEEeccHHHHHHHHHHHHHHHH
Confidence 999999999999876654332 2455443211 11111111111211 2332 578999
Q ss_pred HHHHHcCCCCCCcceeecC
Q 018076 343 RALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 343 ~Al~~Agl~~~dId~ie~~ 361 (361)
++|+++|++++|||+|-+|
T Consensus 279 ~~L~~~gl~~~dId~~~~H 297 (372)
T PRK07515 279 EHLAENGLTPADVKRFWLH 297 (372)
T ss_pred HHHHHcCCCHHHCCEEEEC
Confidence 9999999999999998765
|
|
| >cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.3e-19 Score=169.19 Aligned_cols=200 Identities=23% Similarity=0.270 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+++++||+|+|+++++++ ++++|+..... . ...++..++..+|
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id-----~vi~g~~~~~~----------------------~----~~~~a~~va~~lG 64 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID-----AVVVGNAAGGR----------------------F----QSFPGALIAEYLG 64 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEecccccc----------------------c----ccchHHHHHHHcC
Confidence 467999999999999999887777 88888743210 0 1234567888899
Q ss_pred CC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-H--H------HHh---hcc---------ccc
Q 018076 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-M--A------GFC---KSR---------ALT 266 (361)
Q Consensus 209 l~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~-~--~------~~~---~~~---------~ls 266 (361)
+. .|.++++.+|+|++.+|..|+++|++|.+|++||+|+|....... . . .+. ..+ .+.
T Consensus 65 l~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a 144 (375)
T cd00829 65 LLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGLTPPALYALAA 144 (375)
T ss_pred CCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCCChHHHHHHHH
Confidence 84 589999999999999999999999999999999999986332110 0 0 000 000 000
Q ss_pred cc----CC------------------CCCCCC----------------CcCCCCCCCcccccceeeeEeeCChhhHHhcC
Q 018076 267 TK----YN------------------GTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRG 308 (361)
Q Consensus 267 ~~----~~------------------~~~~~~----------------~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g 308 (361)
++ |+ .+|... +.|+. ..+...++|||+++||++++.|++.
T Consensus 145 ~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl~s~~~a~~~- 222 (375)
T cd00829 145 RRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVLASEERAREL- 222 (375)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEEecHHHHhhc-
Confidence 00 00 112211 11222 2456678999999999999999988
Q ss_pred CeeeEEEEEEEeecCCCCCCCCCC--CcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 309 AKIYAEVRGYGMSGDAHHITQPHI--DGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 309 ~~~~a~i~g~~~~~d~~~~~~p~~--~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
.+++++|.|++..++..++...+. .+.+...++++||++|||+++|||++|||
T Consensus 223 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~ 277 (375)
T cd00829 223 TDRPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELY 277 (375)
T ss_pred CCCCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 667899999999988776654432 56777899999999999999999999986
|
The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein. |
| >PRK07661 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.9e-19 Score=167.97 Aligned_cols=197 Identities=22% Similarity=0.316 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+.+++++ .+++|+...+. .. ....+..++..+|+
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID-----~vi~g~~~~~~----------------------~~---g~~~a~~~~~~lGl 77 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID-----DLIIGCAMPEA----------------------EQ---GLNMARNIGALAGL 77 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC-----EEEEEeccccc----------------------cc---cchHHHHHHHHcCC
Confidence 57899999999999987667777 88998643210 00 01234457788898
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH---------------HHHhhccc----cccc
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---------------AGFCKSRA----LTTK 268 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~---------------~~~~~~~~----ls~~ 268 (361)
. -|.++|+++|+||+.|+..|++.|++|.+|++||+|+|........ ..+..++. +.++
T Consensus 78 ~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~m~~~a~~~~~~ 157 (391)
T PRK07661 78 PYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMGMGHTAEQVAVK 157 (391)
T ss_pred CCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhhHHHHHHHHHHH
Confidence 7 3999999999999999999999999999999999999863221000 00000010 0111
Q ss_pred CC------------------CCCCC-C---------------------------------C------------cC-CC--
Q 018076 269 YN------------------GTPQE-A---------------------------------S------------RP-FD-- 281 (361)
Q Consensus 269 ~~------------------~~~~~-~---------------------------------~------------~p-fd-- 281 (361)
|+ .+|.. . . +| |.
T Consensus 158 ~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~l~~l~p~f~~~ 237 (391)
T PRK07661 158 YGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEILGKLRPAFNVK 237 (391)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHHHhcCCCCcCCC
Confidence 11 01110 0 0 11 11
Q ss_pred ---CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 282 ---CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 282 ---~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
...|...++|||+++||++++.|+++|.+++++|+|++..+.. |...+.+...++++||++|||+|+|||+|
T Consensus 238 g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~did~~ 312 (391)
T PRK07661 238 GSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFAVAGVP-----PEVMGIGPIAAIPKALKLAGLELSDIGLF 312 (391)
T ss_pred CCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEecCC-----CcccchHHHHHHHHHHHHcCCCHHHCCEE
Confidence 1134444899999999999999999999999999999998642 33344567899999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
|+|
T Consensus 313 ei~ 315 (391)
T PRK07661 313 ELN 315 (391)
T ss_pred EeC
Confidence 986
|
|
| >PRK09052 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=164.66 Aligned_cols=197 Identities=21% Similarity=0.249 Sum_probs=137.8
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~dA-g~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+.+++++||+++ |+++++++ .|++|+..... . .....+..+....|
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID-----~vi~g~~~~~~----------------------~---~~~~~ar~~~~~~G 81 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE-----DAIVGCAMPEA----------------------E---QGLNVARIGALLAG 81 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC-----EEEEEecCCCC----------------------C---CCchHHHHHHHHcC
Confidence 678999999999997 99998888 99999743210 0 01122223445568
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH--------HHHhh---------ccc----c
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------AGFCK---------SRA----L 265 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~--------~~~~~---------~~~----l 265 (361)
+. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.......+ ..+.. ++. +
T Consensus 82 l~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 161 (399)
T PRK09052 82 LPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAYGMGLTAEKV 161 (399)
T ss_pred CCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccchHHHHHHHH
Confidence 85 3799999999999999999999999999999999999863221100 00000 000 0
Q ss_pred cccCC------------------CCCCC-C----CcC-------------------------------------------
Q 018076 266 TTKYN------------------GTPQE-A----SRP------------------------------------------- 279 (361)
Q Consensus 266 s~~~~------------------~~~~~-~----~~p------------------------------------------- 279 (361)
..+|+ .+|.. . ..|
T Consensus 162 ~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~e~l~~l~p~ 241 (399)
T PRK09052 162 AEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSLEGLAKLKPV 241 (399)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCHHHHhcCCCc
Confidence 00111 01110 0 001
Q ss_pred CCC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 280 FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 280 fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
|+. ..|...++|||+++||++++.|+++|.+++++|.|++.... .|...+.+...++++||++|||+|+|
T Consensus 242 f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~~~~~-----~~~~~~~~~~~A~~~al~~Agi~~~d 316 (399)
T PRK09052 242 FANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGV-----PPEIMGIGPIEAIPAALKQAGLKQDD 316 (399)
T ss_pred cCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEecc-----CCCccchhHHHHHHHHHHHcCCCHHH
Confidence 110 01224589999999999999999999999999999999864 34444557789999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
||++|+|
T Consensus 317 id~~ei~ 323 (399)
T PRK09052 317 LDWIELN 323 (399)
T ss_pred cCEEEeC
Confidence 9999986
|
|
| >PRK13359 beta-ketoadipyl CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.3e-18 Score=165.15 Aligned_cols=197 Identities=20% Similarity=0.284 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~d-Ag~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+..+++++|++ +|+++++++ .|++|+..... .. ...++..++...|
T Consensus 27 ~~L~~~a~~~al~r~a~i~~~~Id-----~vi~G~~~~~~----------------------~~---g~~~ar~~~l~~G 76 (400)
T PRK13359 27 DDLGAVPLKALVERNPDVDWAAID-----DVIYGCANQAG----------------------ED---NRNVARMSLLLAG 76 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEeccccc----------------------cc---cccHHHHHHHHcC
Confidence 46788899999994 799998888 99999743110 00 1235566777888
Q ss_pred CCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH----HH-------hh--------c---c
Q 018076 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA----GF-------CK--------S---R 263 (361)
Q Consensus 209 l~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~----~~-------~~--------~---~ 263 (361)
+.. |+++|+.+|+||+.|+..|+++|++|++|++||+|+|.... |+.+. .+ .. . .
T Consensus 77 l~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (400)
T PRK13359 77 LPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIGWRFVNPLMKQ 156 (400)
T ss_pred CCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCcccccccccccccCCcccc
Confidence 854 99999999999999999999999999999999999997433 31000 00 00 0 0
Q ss_pred cc------------cccCC-------------------CCCCC-------------------------C-----------
Q 018076 264 AL------------TTKYN-------------------GTPQE-------------------------A----------- 276 (361)
Q Consensus 264 ~l------------s~~~~-------------------~~~~~-------------------------~----------- 276 (361)
.. .++|+ .++.+ .
T Consensus 157 ~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~r~~t~e~l~~ 236 (400)
T PRK13359 157 LYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHPRETTLEALAK 236 (400)
T ss_pred ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCCCCCCHHHHhc
Confidence 00 00111 00100 0
Q ss_pred Cc-CCCCC-----CCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCC
Q 018076 277 SR-PFDCG-----RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVH 350 (361)
Q Consensus 277 ~~-pfd~~-----~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl 350 (361)
.+ .|+.+ .+...++|||+++||++++.|+++|.+++++|.|++... ..|.+.+.+...+++++|++|||
T Consensus 237 l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~A~~~al~~AGl 311 (400)
T PRK13359 237 LKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIATAG-----VEPRVMGIGPAPATQKLLARLGM 311 (400)
T ss_pred CCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEEEec-----CCCCccchhHHHHHHHHHHHhCC
Confidence 11 13321 122337999999999999999999999999999998874 23455566778999999999999
Q ss_pred CCCCcceeecC
Q 018076 351 NVDGFEQLSIQ 361 (361)
Q Consensus 351 ~~~dId~ie~~ 361 (361)
+|+|||+||+|
T Consensus 312 ~~~DID~iei~ 322 (400)
T PRK13359 312 TLDQFDVIELN 322 (400)
T ss_pred CHHHcCcCccC
Confidence 99999999986
|
|
| >PRK06205 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=166.72 Aligned_cols=196 Identities=18% Similarity=0.259 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ .|++|+..... ....++..++..+|+
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID-----~vv~g~~~~~~--------------------------~~~~~a~~va~~~Gl 75 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID-----DVIFGQGYPNG--------------------------EAPAIGRVAALDAGL 75 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCChHHHHHHHHcCC
Confidence 57899999999999999998887 89999743211 011234467778888
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH----------------HHHH------------H
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL----------------SMAG------------F 259 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~----------------~~~~------------~ 259 (361)
. -|+++|+.+|+||+.||..|+++|++|.+|++||+|+|...... .+.. +
T Consensus 76 ~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (404)
T PRK06205 76 PVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLARGRETAGGRRF 155 (404)
T ss_pred CCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhccCccccccccc
Confidence 6 37899999999999999999999999999999999998632100 0000 0
Q ss_pred h-hccc--ccc----cCC------------------C--------------------------CCCCCC-----------
Q 018076 260 C-KSRA--LTT----KYN------------------G--------------------------TPQEAS----------- 277 (361)
Q Consensus 260 ~-~~~~--ls~----~~~------------------~--------------------------~~~~~~----------- 277 (361)
. ...+ .++ +|+ . +|+...
T Consensus 156 ~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~ 235 (404)
T PRK06205 156 PVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHPRADTTLESLAK 235 (404)
T ss_pred CCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCCCCCCCHHHHhc
Confidence 0 0000 011 111 0 121111
Q ss_pred -cC-C---C-----CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHH
Q 018076 278 -RP-F---D-----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347 (361)
Q Consensus 278 -~p-f---d-----~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~ 347 (361)
+| | + .-.+...++|||+++||++++.|++.+.+++++|.|++...+... ..+.+...++++||++
T Consensus 236 ~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~~~~~~~~-----~~~~~~~~a~~~al~~ 310 (404)
T PRK06205 236 LRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWAVAGVEPS-----RMGIGPVPATEKALAR 310 (404)
T ss_pred CCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEEEeccCCc-----cccccHHHHHHHHHHH
Confidence 12 2 1 112344478999999999999999999999999999998865322 2233558999999999
Q ss_pred cCCCCCCcceeecC
Q 018076 348 VVHNVDGFEQLSIQ 361 (361)
Q Consensus 348 Agl~~~dId~ie~~ 361 (361)
|||+|+|||++|+|
T Consensus 311 Agl~~~Did~~ei~ 324 (404)
T PRK06205 311 AGLTLDDIDLIELN 324 (404)
T ss_pred cCCCHHHCCEeeec
Confidence 99999999999986
|
|
| >PRK08131 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=166.01 Aligned_cols=197 Identities=22% Similarity=0.293 Sum_probs=138.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++.+||+++|+++.+++ .+++|+...+. .. ...++..++...|+
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id-----~v~~G~~~~~~----------------------~~---~~~~ar~~~~~~Gl 76 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIE-----DVILGCTNQAG----------------------ED---SRNVARNALLLAGL 76 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc----------------------cc---cccHHHHHHHhcCC
Confidence 57889999999999999988888 89999743210 00 01123346666777
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-H-----------HHHhh--------ccc---
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-M-----------AGFCK--------SRA--- 264 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~-~-----------~~~~~--------~~~--- 264 (361)
. -|.++|+.+|+||+.|+..|++.|++|++|++||+|+|....... + ..+.. ...
T Consensus 77 p~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T PRK08131 77 PVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIGARFPNPKIVAQ 156 (401)
T ss_pred CCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhcccccCcccccc
Confidence 5 489999999999999999999999999999999999996332110 0 00000 000
Q ss_pred cc------------ccCC-------------------CCCCC----CCcCC-------------CC--------------
Q 018076 265 LT------------TKYN-------------------GTPQE----ASRPF-------------DC-------------- 282 (361)
Q Consensus 265 ls------------~~~~-------------------~~~~~----~~~pf-------------d~-------------- 282 (361)
.. .+|+ ..++. ...|. +.
T Consensus 157 ~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~~r~~~~~e~L~ 236 (401)
T PRK08131 157 YGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEHPRPSSTVEALT 236 (401)
T ss_pred cccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCCCCCCCCHHHHh
Confidence 01 0111 00000 00011 10
Q ss_pred ------------CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCC
Q 018076 283 ------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVH 350 (361)
Q Consensus 283 ------------~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl 350 (361)
..|..-++|||+++||++++.|++.+.+++++|.|++...+. |...+.+...+++++|+++||
T Consensus 237 ~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~a~~~agl 311 (401)
T PRK08131 237 KLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVE-----PRIMGIGPVEAIKKALARAGL 311 (401)
T ss_pred cCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEeccC-----CccccchHHHHHHHHHHHcCC
Confidence 014455899999999999999999998999999999988652 333345668999999999999
Q ss_pred CCCCcceeecC
Q 018076 351 NVDGFEQLSIQ 361 (361)
Q Consensus 351 ~~~dId~ie~~ 361 (361)
+|+|||++|+|
T Consensus 312 ~~~did~~ei~ 322 (401)
T PRK08131 312 TLDDMDIIEIN 322 (401)
T ss_pred CHHHCCeehhc
Confidence 99999999997
|
|
| >COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.3e-18 Score=154.82 Aligned_cols=219 Identities=19% Similarity=0.228 Sum_probs=153.7
Q ss_pred CceEEEeeceeCCCCC-CHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~-~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.++.|+|+|...|.-. +.+++.+.+..-..+|...+..+ .+. +.
T Consensus 2 ~~a~i~g~G~~lP~~~vtn~d~e~~~~tsdewI~~rtGir-------------------~R~------------~a---- 46 (323)
T COG0332 2 MNAKILGIGSYLPERVVTNADLEKRVDTSDEWIETRTGIR-------------------ERR------------IA---- 46 (323)
T ss_pred CcceEEEEEeecCCcccChHHHHhccCCCcceeeeecCCc-------------------eee------------ec----
Confidence 4578999999999975 66666654444444444444322 000 00
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
..-.....|+..|+++||++||+++++++ -++++|+.+. .+.+
T Consensus 47 ------~~~e~~s~la~~Aa~~AL~~Agi~~~dID-----lII~aT~tpd--------------------------~~~P 89 (323)
T COG0332 47 ------ADDETTSDLAVEAARKALEDAGISPDDID-----LIIVATSTPD--------------------------HLFP 89 (323)
T ss_pred ------CCCccHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCcc--------------------------cCCC
Confidence 00123467999999999999999999988 8888885432 1235
Q ss_pred HHHHHHHHHcCCCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 198 MASGHVSMKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 198 ~~a~~is~~lgl~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
..|..|+..||+++ +.+.++.+|++.++||..|..+|++|.++.+||+|.|.. |+ .
T Consensus 90 s~A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~---------------S~--------~ 146 (323)
T COG0332 90 STACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETL---------------SR--------I 146 (323)
T ss_pred hHHHHHHHHhCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHh---------------hc--------c
Confidence 56788999999988 999999999999999999999999999999999999972 21 1
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCCC----------------CCCc---
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP----------------HIDG--- 334 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~p----------------~~~g--- 334 (361)
.-|+.+...+++||||+++||+..+ .. .. |......+|+.. +..+ ...|
T Consensus 147 -ld~~dR~t~vlFgDGAgAvvl~~~~--~~--~~----i~~~~l~sdg~~~~~l~~~~~~~~~~~~~~~~~~~~m~Gr~v 217 (323)
T COG0332 147 -LDWTDRDTCVLFGDGAGAVVLEATE--DD--NG----ILDTDLGSDGSQGDLLYLPGGGSATPKEESGGGLLVMDGREV 217 (323)
T ss_pred -CCHhhccceEEEcCCceEEEEecCC--CC--cC----eeeeeeeccccCCCeeeccCCCCccccccccccceeeccHHH
Confidence 1134456789999999999999876 11 11 222333333221 0000 1122
Q ss_pred -----HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 335 -----KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 335 -----~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
..+.++++++|+.+|++++|||++=.|
T Consensus 218 fk~av~~~~~~~~~~L~~~~l~~~dId~~vpH 249 (323)
T COG0332 218 FKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH 249 (323)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc
Confidence 345678999999999999999998543
|
|
| >TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.8e-18 Score=166.16 Aligned_cols=197 Identities=23% Similarity=0.311 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+|||+++++++ ++++++..... .. ...+..++..+|
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID-----~vv~g~~~~~~---------------------~~-----~~~a~~va~~lG 69 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID-----DVIFGNVLQAG---------------------EQ-----QNIARQAALLAG 69 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC---------------------CC-----ChHHHHHHHHcC
Confidence 467999999999999999998887 88888632110 00 123446778888
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHH---------H-H-----H-hhcc------
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM---------A-G-----F-CKSR------ 263 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~---------~-~-----~-~~~~------ 263 (361)
+. .|++.|+++|+|++.+|..|+.+|++|.+|.+||+|+|.... +... . . + ...+
T Consensus 70 l~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 149 (386)
T TIGR01930 70 LPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQILKDGLTDPLN 149 (386)
T ss_pred CCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhhcCcccccccc
Confidence 86 489999999999999999999999999999999999875211 1000 0 0 0 0000
Q ss_pred -----ccccc----CC------------------CC-----------CC--------------C-CCcCCC---------
Q 018076 264 -----ALTTK----YN------------------GT-----------PQ--------------E-ASRPFD--------- 281 (361)
Q Consensus 264 -----~ls~~----~~------------------~~-----------~~--------------~-~~~pfd--------- 281 (361)
..+++ |+ .+ |. . ..+|..
T Consensus 150 ~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~t~e~v~~s~~ 229 (386)
T TIGR01930 150 GLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNTTLEKLAKLKP 229 (386)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCCCHHHHhCCCC
Confidence 00000 11 01 21 0 011111
Q ss_pred --------CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 282 --------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 282 --------~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
...+...++|||+++||++++.|++++.+++++|.|++.... .|++...+...++++||++|||+|+
T Consensus 230 i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~~ 304 (386)
T TIGR01930 230 AFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFAVAGV-----DPEIMGLGPVPAIPKALKKAGLSIS 304 (386)
T ss_pred CcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccccHHHHHHHHHHHcCCCHH
Confidence 013444479999999999999999999999999999998753 2233344557999999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
|||++|+|
T Consensus 305 did~~e~~ 312 (386)
T TIGR01930 305 DIDLFEIN 312 (386)
T ss_pred HCCeeehc
Confidence 99999986
|
This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt |
| >PLN02287 3-ketoacyl-CoA thiolase | Back alignment and domain information |
|---|
Probab=99.77 E-value=4e-18 Score=165.57 Aligned_cols=197 Identities=19% Similarity=0.322 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ +|++|+...... .....+..++..+|+
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID-----~vv~G~~~~~~~-------------------------~~~~~~r~~a~~~Gl 121 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVG-----DIVVGTVLAPGS-------------------------QRANECRMAAFYAGF 121 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCccc-------------------------ccchHHHHHHHHCCC
Confidence 67999999999999999998888 889887432110 011122345667788
Q ss_pred CC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH-HHH--------HHh-------hcccc----cc
Q 018076 210 QG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL-SMA--------GFC-------KSRAL----TT 267 (361)
Q Consensus 210 ~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~-~~~--------~~~-------~~~~l----s~ 267 (361)
.. |.++|+.+|+||+.|+..|+++|++|.+|++||+|+|...... ... .+. .++.. .+
T Consensus 122 ~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~y~~ 201 (452)
T PLN02287 122 PETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLPMGITSENVAE 201 (452)
T ss_pred CCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcCHHHHHHHHHH
Confidence 64 8899999999999999999999999999999999998632211 000 000 00000 00
Q ss_pred cCC------------------CCCCC-CC------------------------------------------cC-CCC---
Q 018076 268 KYN------------------GTPQE-AS------------------------------------------RP-FDC--- 282 (361)
Q Consensus 268 ~~~------------------~~~~~-~~------------------------------------------~p-fd~--- 282 (361)
+|+ .+|.. .. +| |+.
T Consensus 202 ~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~l~~v~~~~g~ 281 (452)
T PLN02287 202 RFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAKLKPVFKKNGT 281 (452)
T ss_pred HhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhcCCCccCCCCC
Confidence 111 11111 00 00 110
Q ss_pred --CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeec
Q 018076 283 --GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSI 360 (361)
Q Consensus 283 --~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~ 360 (361)
..+...++|||+++||++++.|++++.+|++++.|++... ..|...+.+...++++||++|||+|+|||++|+
T Consensus 282 lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~~~~-----~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei 356 (452)
T PLN02287 282 TTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFAAVG-----VDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEI 356 (452)
T ss_pred EeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEeecc-----CCCccchHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 0244458999999999999999999999999999987542 134445566789999999999999999999999
Q ss_pred C
Q 018076 361 Q 361 (361)
Q Consensus 361 ~ 361 (361)
|
T Consensus 357 ~ 357 (452)
T PLN02287 357 N 357 (452)
T ss_pred c
Confidence 6
|
|
| >PRK06445 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.4e-18 Score=163.74 Aligned_cols=199 Identities=19% Similarity=0.285 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ .+++|+....... + ... .. ...+...++.
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID-----~vi~g~~~~~~~~-----------------~-~~~----~~-~~~l~a~~~~ 84 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEID-----DIITGCALQVGEN-----------------W-LYG----GR-HPIFLARLPY 84 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----eeEEEeecCCCcc-----------------c-ccH----HH-HHHHHcCCCC
Confidence 67899999999999999998887 8899874421100 0 000 00 0112222344
Q ss_pred CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH----------HHH---H---Hh-----hcccccc
Q 018076 210 QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL----------SMA---G---FC-----KSRALTT 267 (361)
Q Consensus 210 ~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~----------~~~---~---~~-----~~~~ls~ 267 (361)
+-|+++|+++|+||+.|+..|+++|++|.+|++||+|+|.... ++ .+. . +. .++..++
T Consensus 85 ~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~ 164 (394)
T PRK06445 85 NIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGLTAE 164 (394)
T ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHHHHH
Confidence 4589999999999999999999999999999999999984221 10 000 0 00 0000010
Q ss_pred ----cCC------------------C-------------------------CCCCCCc------------C-CC-----C
Q 018076 268 ----KYN------------------G-------------------------TPQEASR------------P-FD-----C 282 (361)
Q Consensus 268 ----~~~------------------~-------------------------~~~~~~~------------p-fd-----~ 282 (361)
+|+ . +|+...+ | |+ .
T Consensus 165 ~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g~lt 244 (394)
T PRK06445 165 KLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDGVIT 244 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCCcEe
Confidence 111 0 2222222 1 11 1
Q ss_pred CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 283 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 283 ~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
..+...++|||+++||++++.|++++.+++++|.|++...+. |...+.+...++++||++|||+|+|||++|+|
T Consensus 245 ~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~ 318 (394)
T PRK06445 245 AGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFGFAGVP-----PAIMGKGPVPASKKALEKAGLSVKDIDLWEIN 318 (394)
T ss_pred cCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEEeccC-----CchhcchHHHHHHHHHHHcCCCHHHcCEEEec
Confidence 123445799999999999999999999999999999988642 33334566899999999999999999999997
|
|
| >PRK08242 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-18 Score=163.57 Aligned_cols=197 Identities=20% Similarity=0.213 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.++++++|+++|+++++++ .|++|+...... .....+...+...|+
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID-----~vi~G~~~~~~~-------------------------~~~~~~r~a~~~~Gl 78 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVD-----DVVLGCVTPVGD-------------------------QGADIARTAVLAAGL 78 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCCCcc-------------------------ccccHHHHHHHHcCC
Confidence 56888999999999999988887 899998532100 011233344456677
Q ss_pred --CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHH----------HH----Hhhccccc----cc
Q 018076 210 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM----------AG----FCKSRALT----TK 268 (361)
Q Consensus 210 --~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~----------~~----~~~~~~ls----~~ 268 (361)
+-|+++|+.+|+|++.||..|+++|++|.+|++||+|+|.... |+.. .. +..++..+ ++
T Consensus 79 ~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~mg~~Ae~~a~~ 158 (402)
T PRK08242 79 PETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVPQGISADLIATK 158 (402)
T ss_pred CCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCCHHHHHHHHHHH
Confidence 3489999999999999999999999999999999999996332 2100 00 00001000 00
Q ss_pred CC-----------------------------------------CCCCCCC------------cC-CCCCC----------
Q 018076 269 YN-----------------------------------------GTPQEAS------------RP-FDCGR---------- 284 (361)
Q Consensus 269 ~~-----------------------------------------~~~~~~~------------~p-fd~~~---------- 284 (361)
|+ .+++... +| |+...
T Consensus 159 ~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~~~~~g~~~~~~ 238 (402)
T PRK08242 159 YGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMMGEMGGFDAVAL 238 (402)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCccccCccccccc
Confidence 11 0122211 22 43211
Q ss_pred ----------------CcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHc
Q 018076 285 ----------------DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQV 348 (361)
Q Consensus 285 ----------------~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~A 348 (361)
|...++|||+++||++++.|+++|.+++++|.|++...+... ..+.+...++++||+++
T Consensus 239 ~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~~~~~~~~-----~~~~~~~~a~~~al~~A 313 (402)
T PRK08242 239 QKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATATIGSDPT-----IMLTGPVPATRKALAKA 313 (402)
T ss_pred ccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCch-----hhcccHHHHHHHHHHHc
Confidence 333589999999999999999999999999999988765322 12233478999999999
Q ss_pred CCCCCCcceeecC
Q 018076 349 VHNVDGFEQLSIQ 361 (361)
Q Consensus 349 gl~~~dId~ie~~ 361 (361)
||+++|||++|+|
T Consensus 314 Gl~~~DID~~ei~ 326 (402)
T PRK08242 314 GLTVDDIDLFELN 326 (402)
T ss_pred CCCHHHCCEEEec
Confidence 9999999999986
|
|
| >PRK05790 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-18 Score=165.57 Aligned_cols=196 Identities=24% Similarity=0.379 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+|||+++++++ ++++|+..... . ...++..+...+|+
T Consensus 27 ~~La~~A~~~AL~dAgl~~~dID-----~vi~g~~~~~~-------------------~-------~~~~~~~~~~~~gl 75 (393)
T PRK05790 27 VELGAIVIKAALERAGVPPEQVD-----EVIMGQVLQAG-------------------A-------GQNPARQAALKAGL 75 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----eEEEEEecCCC-------------------C-------CCcHHHHHHHHcCC
Confidence 67899999999999999998887 88888643210 0 00112224455677
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH---------------H-HHH------h-----
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS---------------M-AGF------C----- 260 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~---------------~-~~~------~----- 260 (361)
. -|.++|+.+|+|++.||..|+++|++|.+|++||+|+|....... . ..+ .
T Consensus 76 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (393)
T PRK05790 76 PVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMIHDGLTDAFNGY 155 (393)
T ss_pred CCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhcccccccccCCC
Confidence 4 489999999999999999999999999999999999886311000 0 000 0
Q ss_pred hccccccc----CC------------------C---C--------C---------------CCC------------CcC-
Q 018076 261 KSRALTTK----YN------------------G---T--------P---------------QEA------------SRP- 279 (361)
Q Consensus 261 ~~~~ls~~----~~------------------~---~--------~---------------~~~------------~~p- 279 (361)
.++..+++ |+ . + | +.. .+|
T Consensus 156 ~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~~~e~l~~~~~v 235 (393)
T PRK05790 156 HMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDTTAESLAKLRPA 235 (393)
T ss_pred CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCCCHHHHhCCCCc
Confidence 00000111 11 0 0 0 000 000
Q ss_pred CCC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 280 FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 280 fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
|+. ..|...++|||+++||++++.|++++.+++++|.|++..+. .|...+.+...++++||++|||+|+|
T Consensus 236 ~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~a~~~Agi~~~d 310 (393)
T PRK05790 236 FDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYAVAGV-----DPAIMGIGPVPAIRKALEKAGWSLAD 310 (393)
T ss_pred cCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEEEccC-----CCCccchhHHHHHHHHHHHcCCCHHH
Confidence 111 01456689999999999999999999999999999998753 22333445678999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
||++|+|
T Consensus 311 id~~e~~ 317 (393)
T PRK05790 311 LDLIEIN 317 (393)
T ss_pred CCEEEeC
Confidence 9999986
|
|
| >PRK07850 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-17 Score=160.48 Aligned_cols=197 Identities=16% Similarity=0.182 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.++++++|+++|+++.+++ .|++|+.... . .....++..+....|+
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id-----~v~~G~~~~~----------------------~---~q~~~~ar~~~l~~Gl 76 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVE-----QVIGGCVTQA----------------------G---EQSNNITRTAWLHAGL 76 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccc----------------------c---cccchHHHHHHHhCCC
Confidence 57889999999999999988887 8999974210 0 0001133345555777
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH-------------------HHhhcccccc
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA-------------------GFCKSRALTT 267 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~-------------------~~~~~~~ls~ 267 (361)
. -|+++|+++|+||+.|+..|++.|++|.+|++||+|+|.... |+... .+.....+.+
T Consensus 77 ~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~m~~~ae~~~~ 156 (387)
T PRK07850 77 PYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMPNQFEAAERIAK 156 (387)
T ss_pred CCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcchHHHHHHHHHH
Confidence 5 389999999999999999999999999999999999997432 11000 0000000000
Q ss_pred cCC------------------C-----------------------CCCCCC--------------------cC-CCC---
Q 018076 268 KYN------------------G-----------------------TPQEAS--------------------RP-FDC--- 282 (361)
Q Consensus 268 ~~~------------------~-----------------------~~~~~~--------------------~p-fd~--- 282 (361)
+|+ . ||.... +| |..
T Consensus 157 ~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~~l~p~~~~~~~ 236 (387)
T PRK07850 157 RRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLAGLKPVLEGGIH 236 (387)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhccCCCCCCCCCc
Confidence 111 0 111110 12 311
Q ss_pred C-CCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 283 G-RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 283 ~-~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+ .|...++|||+++||.+++.|++.+.++.++|.|++...... .....+...++++||++|||+|+|||++|+|
T Consensus 237 t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~~ei~ 311 (387)
T PRK07850 237 TAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQALVGAEP-----YYHLDGPVQATAKVLEKAGMKIGDIDLVEIN 311 (387)
T ss_pred cchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEEEeccCc-----hhhcchHHHHHHHHHHHcCCCHHHcCeeeec
Confidence 1 244558999999999999999999988889999998754321 2223455889999999999999999999996
|
|
| >TIGR02430 pcaF beta-ketoadipyl CoA thiolase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.5e-18 Score=163.19 Aligned_cols=197 Identities=20% Similarity=0.267 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~-dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+.++++++|+ ++|+++++++ .|++|+.... +.....++..++...|
T Consensus 26 ~~L~~~a~~~al~~~a~i~~~~Id-----~v~~G~~~~~-------------------------~~~~~~~ar~~~~~~G 75 (400)
T TIGR02430 26 DDLAAVPIKALLARNPQLDWAAID-----DVIYGCANQA-------------------------GEDNRNVARMAALLAG 75 (400)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEecccc-------------------------ccccccHHHHHHHHcC
Confidence 5788999999999 6899988887 8999974310 0001234556788888
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH------HHH-----Hh------h--c---c
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS------MAG-----FC------K--S---R 263 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~------~~~-----~~------~--~---~ 263 (361)
+. -|+++|+++|+||+.|+..|++.|++|++|++||+|+|.... |+. ... +. . . .
T Consensus 76 l~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (400)
T TIGR02430 76 LPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIGWRFINPLMKA 155 (400)
T ss_pred CCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCcccccccccccccccccccccccccccCccccc
Confidence 86 499999999999999999999999999999999999997432 210 000 00 0 0 0
Q ss_pred ccc------------ccCC--------------------------------------------CCCCCCCc---------
Q 018076 264 ALT------------TKYN--------------------------------------------GTPQEASR--------- 278 (361)
Q Consensus 264 ~ls------------~~~~--------------------------------------------~~~~~~~~--------- 278 (361)
... .+|+ .+|+...|
T Consensus 156 ~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~r~~~t~e~l~ 235 (400)
T TIGR02430 156 LYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHPRPETTLEGLA 235 (400)
T ss_pred ccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCccCCCCCHHHHh
Confidence 000 0000 01221111
Q ss_pred ---C-CCC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcC
Q 018076 279 ---P-FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVV 349 (361)
Q Consensus 279 ---p-fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Ag 349 (361)
| |+. ..|...++|||+++||+++++|++++.+++++|.|++..+. .|.+.+.+...++++||++||
T Consensus 236 ~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~~~~~-----~~~~~~~~~~~a~~~al~~Ag 310 (400)
T TIGR02430 236 KLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAATAGV-----EPRIMGIGPVPATQKLLARAG 310 (400)
T ss_pred cCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEEEecC-----CCccccchHHHHHHHHHHHhC
Confidence 1 221 12344489999999999999999999999999999988753 233345566899999999999
Q ss_pred CCCCCcceeecC
Q 018076 350 HNVDGFEQLSIQ 361 (361)
Q Consensus 350 l~~~dId~ie~~ 361 (361)
|+|+|||++|+|
T Consensus 311 l~~~DID~~ei~ 322 (400)
T TIGR02430 311 LSIDQFDVIELN 322 (400)
T ss_pred CCHHHCCCcccC
Confidence 999999999986
|
Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. |
| >TIGR02445 fadA fatty oxidation complex, beta subunit FadA | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.9e-17 Score=158.43 Aligned_cols=197 Identities=20% Similarity=0.260 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~d-Ag~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+.+++++||++ +|+++++++ .|++|+..... -.+ ..++..+....|
T Consensus 26 ~~L~~~a~~~al~~~agl~~~~Id-----~v~~G~~~~~~----------------------~~g---~~~ar~~~~~~g 75 (385)
T TIGR02445 26 EDLSAHLMSKLLARNPKVDPAEVE-----DIYWGCVQQTL----------------------EQG---FNIARNAALLAQ 75 (385)
T ss_pred HHHHHHHHHHHHHhccCCCHHHcC-----EEEEecccccc----------------------ccc---chHHHHHHHHCC
Confidence 67899999999995 699998888 89999742100 000 113334444555
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH------HHHhh--------ccc----cccc
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------AGFCK--------SRA----LTTK 268 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~------~~~~~--------~~~----ls~~ 268 (361)
+. -|+++|+.+|+||+.|+..|++.|++|.+|++||+|+|........ ..+.. ++. +..+
T Consensus 76 ~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 155 (385)
T TIGR02445 76 IPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMMGLTAEMLGKM 155 (385)
T ss_pred CCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchHHHHHHHHHHH
Confidence 53 3779999999999999999999999999999999999863221100 00000 000 0000
Q ss_pred CC--------------------------CC------------------CCCCCc------------C-CCC------CCC
Q 018076 269 YN--------------------------GT------------------PQEASR------------P-FDC------GRD 285 (361)
Q Consensus 269 ~~--------------------------~~------------------~~~~~~------------p-fd~------~~~ 285 (361)
|+ .+ |+...| | |+. ..|
T Consensus 156 ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~ 235 (385)
T TIGR02445 156 HGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFDPKNGTVTAGT 235 (385)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceecCCCCceeccc
Confidence 11 01 222222 1 221 134
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
...++|||+++||++++.|++++.+++++|.|++.+.... ...+.+...+++++|+++||+|+|||++|+|
T Consensus 236 ~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~~-----~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~ 306 (385)
T TIGR02445 236 SSALSDGASAMLVMSEQRANELGLKPRARIRSMAVAGCDP-----SIMGYGPVPATQKALKRAGLSISDIDVFELN 306 (385)
T ss_pred CCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEEEcCCCC-----cccchhHHHHHHHHHHHcCCCHHHcCEEEEc
Confidence 4457999999999999999999999999999999875322 2223345789999999999999999999997
|
This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli. |
| >PRK07851 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-17 Score=159.96 Aligned_cols=197 Identities=19% Similarity=0.261 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~dA-g~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+.+++.+||+|+ |+++.+|+ ++++|+.... ...+ ..++..++..+|
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID-----~vv~g~~~~~----------------------~~~g---~~~~~~~a~~lG 77 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID-----DLMLGCGLPG----------------------GEQG---FNMARVVAVLLG 77 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEccccc----------------------cccc---CCHHHHHHHHcC
Confidence 678999999999997 99999888 8888853210 0000 123456888899
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH------------HHH---------------HH
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL------------SMA---------------GF 259 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~------------~~~---------------~~ 259 (361)
+.+ |+++|+.+|+||+.|+..|+++|++|.+|++||+|+|.... +. .+. .|
T Consensus 78 l~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (406)
T PRK07851 78 YDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTAARAEGGAEAW 157 (406)
T ss_pred CCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccccccccccccc
Confidence 976 88999999999999999999999999999999999885211 00 000 00
Q ss_pred hh----------c---cc----------ccccCC---------------CCC-CC------------------CC-cCCC
Q 018076 260 CK----------S---RA----------LTTKYN---------------GTP-QE------------------AS-RPFD 281 (361)
Q Consensus 260 ~~----------~---~~----------ls~~~~---------------~~~-~~------------------~~-~pfd 281 (361)
.. . +. +++++. .++ .. .. ++++
T Consensus 158 ~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~~d~~~r~~~t 237 (406)
T PRK07851 158 HDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVSTDDGPRAGTT 237 (406)
T ss_pred cccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeCCCCCccCCcC
Confidence 00 0 00 000000 011 00 01 0111
Q ss_pred ------------C-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHH
Q 018076 282 ------------C-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRA 344 (361)
Q Consensus 282 ------------~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~A 344 (361)
. ..|...++|||+++||++++.|++.+.+++++|.|++...+. |+....+...++++|
T Consensus 238 ~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~~~~~~-----~~~~~~~~~~a~~~a 312 (406)
T PRK07851 238 YEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTGVSGLS-----PEIMGLGPVEASKQA 312 (406)
T ss_pred HHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEEEccCC-----CCccchhHHHHHHHH
Confidence 1 124455799999999999999999999999999999887542 223344568999999
Q ss_pred HHHcCCCCCCcceeecC
Q 018076 345 LKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 345 l~~Agl~~~dId~ie~~ 361 (361)
|++|||+|+|||++|++
T Consensus 313 l~~Agi~~~did~~ei~ 329 (406)
T PRK07851 313 LARAGMSIDDIDLVEIN 329 (406)
T ss_pred HHHhCCCHHHCCeehhh
Confidence 99999999999999985
|
|
| >PRK09050 beta-ketoadipyl CoA thiolase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.5e-18 Score=162.30 Aligned_cols=197 Identities=22% Similarity=0.327 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALH-DAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~-dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+.++++++|+ ++|+++++++ .|++|+.... +.....++..++...|
T Consensus 27 ~~L~~~a~~~al~~~agi~~~~Id-----~v~~G~~~~~-------------------------~~~~~~~ar~~~~~~G 76 (401)
T PRK09050 27 DDLGAVPLKALMARNPGVDWEAVD-----DVIYGCANQA-------------------------GEDNRNVARMSALLAG 76 (401)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC-----EEEEEecccc-------------------------ccccchHHHHHHHHcC
Confidence 5788999999999 5899988887 8999974210 0011234555778888
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHH----HHH-------hh--------c---c
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM----AGF-------CK--------S---R 263 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~----~~~-------~~--------~---~ 263 (361)
+. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.... |+.+ ..+ .. . .
T Consensus 77 l~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T PRK09050 77 LPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIGWRFVNPLMKA 156 (401)
T ss_pred CCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCcccccccccccccCCcccc
Confidence 83 499999999999999999999999999999999999997432 2100 000 00 0 0
Q ss_pred ccc------------ccCC---------------------CC-----------------------CCCCCc---------
Q 018076 264 ALT------------TKYN---------------------GT-----------------------PQEASR--------- 278 (361)
Q Consensus 264 ~ls------------~~~~---------------------~~-----------------------~~~~~~--------- 278 (361)
... ++|+ .+ ++...|
T Consensus 157 ~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~r~~~t~e~l~ 236 (401)
T PRK09050 157 QYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHPRPETTLEALA 236 (401)
T ss_pred ccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCCCCCCCHHHHh
Confidence 001 1111 11 122121
Q ss_pred ---C-CCC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcC
Q 018076 279 ---P-FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVV 349 (361)
Q Consensus 279 ---p-fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Ag 349 (361)
| |+. -.|...++|||+++||++++.|++++.+++++|+|++..... |...+.+...+++++|++||
T Consensus 237 ~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~~~~~~-----~~~~~~~~~~a~~~al~~Ag 311 (401)
T PRK09050 237 KLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMATAGVE-----PRIMGIGPAPATRKLLARLG 311 (401)
T ss_pred cCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEEEeccC-----CccccchHHHHHHHHHHHcC
Confidence 1 221 123444899999999999999999999999999999887643 22334456899999999999
Q ss_pred CCCCCcceeecC
Q 018076 350 HNVDGFEQLSIQ 361 (361)
Q Consensus 350 l~~~dId~ie~~ 361 (361)
|+++|||++|+|
T Consensus 312 l~~~DId~~ei~ 323 (401)
T PRK09050 312 LTIDQFDVIELN 323 (401)
T ss_pred CCHHHCCccccC
Confidence 999999999986
|
|
| >PRK07516 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.8e-17 Score=158.17 Aligned_cols=201 Identities=19% Similarity=0.232 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ +|++|+..+... .. . ..... .+...+++
T Consensus 23 ~eL~~eA~~~AL~dAgl~~~dId-----~vi~g~~~~~~~-----------------~~-~----~~~~~--~~~~~~gl 73 (389)
T PRK07516 23 ESLIVRVAREALAHAGIAAGDVD-----GIFLGHFNAGFS-----------------PQ-D----FPASL--VLQADPAL 73 (389)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEecCCcc-----------------cc-c----cchhH--HHHHhcCC
Confidence 57899999999999999988887 899987432210 00 0 00011 12233455
Q ss_pred C-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-H-H------H-----------Hh-hccccccc
Q 018076 210 Q-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-M-A------G-----------FC-KSRALTTK 268 (361)
Q Consensus 210 ~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~-~-~------~-----------~~-~~~~ls~~ 268 (361)
+ .|.++|+++|+|++.||..|+++|++|.+|++||+|+|....... . . . +. .++..+++
T Consensus 74 ~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~a~~ 153 (389)
T PRK07516 74 RFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVFGRIAQA 153 (389)
T ss_pred CCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHHHHHHHH
Confidence 4 488999999999999999999999999999999999986322110 0 0 0 00 00001111
Q ss_pred ----CC------------------CCCCCC-CcCCC------------------CCCCcccccceeeeEeeCChhhHHhc
Q 018076 269 ----YN------------------GTPQEA-SRPFD------------------CGRDGFVIGEGSGVLVLEELEHAKKR 307 (361)
Q Consensus 269 ----~~------------------~~~~~~-~~pfd------------------~~~~G~v~gEGAaalvL~~~~~A~~~ 307 (361)
|+ .+|... .+|++ ...|...++|||+++||++++.|++.
T Consensus 154 y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~~~a~~~ 233 (389)
T PRK07516 154 YFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADAETARAL 233 (389)
T ss_pred HHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecHHHHHhc
Confidence 11 122211 01111 12455668999999999999999987
Q ss_pred CCeeeEEEEEEEeecCCCCCCCCCC-CcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 308 GAKIYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 308 g~~~~a~i~g~~~~~d~~~~~~p~~-~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+. +++|.|++..++..++...++ ...+...++++||++|||+|+|||++|+|
T Consensus 234 ~~--~v~i~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~agl~~~did~~e~~ 286 (389)
T PRK07516 234 QR--AVRFRARAHVNDFLPLSRRDPLAFEGPRRAWQRALAQAGVTLDDLSFVETH 286 (389)
T ss_pred CC--CEEEEEEEeccCcccccCCCccccHHHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 53 578999999888666543333 34677889999999999999999999986
|
|
| >PRK06366 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-18 Score=163.02 Aligned_cols=196 Identities=20% Similarity=0.284 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++.+||+|+|+++++++ ++++|+..... ....++..++..+|+
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID-----~vi~g~~~~~~--------------------------~~~~~a~~~~~~~Gl 75 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ-----EVIMGNVIQAG--------------------------VGQNPAGQAAYHAGL 75 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------ccCcHHHHHHHHCCC
Confidence 57899999999999999999888 99998632110 001124557788999
Q ss_pred CC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH--------H---H-------H-HHhhc-----
Q 018076 210 QG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL--------S---M-------A-GFCKS----- 262 (361)
Q Consensus 210 ~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~--------~---~-------~-~~~~~----- 262 (361)
.. |.++|+.+|+||+.|+..|+++|++|++|++||+|+|.... |. . . . .+...
T Consensus 76 ~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 155 (388)
T PRK06366 76 PFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKIDDAMLVDGLIDA 155 (388)
T ss_pred CCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhhhhhcccCcccc
Confidence 64 99999999999999999999999999999999999886221 10 0 0 0 00000
Q ss_pred ------cccccc----CC------------------CCCCC-CC----cCC------------------------CC---
Q 018076 263 ------RALTTK----YN------------------GTPQE-AS----RPF------------------------DC--- 282 (361)
Q Consensus 263 ------~~ls~~----~~------------------~~~~~-~~----~pf------------------------d~--- 282 (361)
+..+++ |+ .+|.. .. .|| +.
T Consensus 156 ~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~~s~~v~~p~g~ 235 (388)
T PRK06366 156 FYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLAKLPPAFDKNGI 235 (388)
T ss_pred ccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHhhCCCccCCCCC
Confidence 111111 11 12222 11 011 11
Q ss_pred --CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeec
Q 018076 283 --GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSI 360 (361)
Q Consensus 283 --~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~ 360 (361)
..|...++|||+++||.+++.|++.+.++.++|+|++........ .......+.+++|++|||+|+|||++||
T Consensus 236 lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~~~~~~~~-----~~~~~~~A~~~al~~Agl~~~DiDv~Ei 310 (388)
T PRK06366 236 LTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYESASLDPLD-----FVEAPIPATRKLLEKQNKSIDYYDLVEH 310 (388)
T ss_pred EehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEEEecCHHH-----hcccHHHHHHHHHHHcCCCHHHcceeec
Confidence 123344799999999999999999888888899999888642211 1122368999999999999999999999
Q ss_pred C
Q 018076 361 Q 361 (361)
Q Consensus 361 ~ 361 (361)
|
T Consensus 311 ~ 311 (388)
T PRK06366 311 N 311 (388)
T ss_pred c
Confidence 7
|
|
| >PRK08313 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=158.66 Aligned_cols=202 Identities=19% Similarity=0.157 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+|||+++.+++ ++++++. .+ .+.+. ..++..++..+|+
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID-----~iv~~~~-~~----------------------~~~~~--~~~~~~va~~LGl 74 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID-----AVVVGKA-PD----------------------FFEGV--MMPELFLADALGA 74 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEecc-cc----------------------ccccc--cCchHHHHHhcCC
Confidence 56899999999999999988887 8888762 11 00010 0112468888999
Q ss_pred CC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCCh---------------HH-----HHH------Hhhc
Q 018076 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA---------------LS-----MAG------FCKS 262 (361)
Q Consensus 210 ~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~---------------~~-----~~~------~~~~ 262 (361)
++ +.+.|+++|+++..++..|+.+|++|.+|.|||+|+|...+. .. +.. +.+.
T Consensus 75 ~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~~ym~~~ 154 (386)
T PRK08313 75 TGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYFAPHVRAYIRRS 154 (386)
T ss_pred CCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 76 888999999999999999999999999999999998752111 00 000 0011
Q ss_pred cccccc----------C-CCCCCCCCc-C-CC--------------CCCCcccccceeeeEeeCChhhHHhcCCeeeEEE
Q 018076 263 RALTTK----------Y-NGTPQEASR-P-FD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEV 315 (361)
Q Consensus 263 ~~ls~~----------~-~~~~~~~~~-p-fd--------------~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i 315 (361)
|..... + ..||....+ | ++ ..-+...++|||+++||.+++.|++.+.++.++|
T Consensus 155 G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a~~l~~~~~~~I 234 (386)
T PRK08313 155 GAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAWI 234 (386)
T ss_pred CcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHHHhcCCCCCeEE
Confidence 111000 0 023322211 1 22 1235566899999999999999998777777899
Q ss_pred EEEEeecCCCCCCC-CCCCcHHHHHHHHHHHHHcCCC--CCCcceeecC
Q 018076 316 RGYGMSGDAHHITQ-PHIDGKGAILAMTRALKQVVHN--VDGFEQLSIQ 361 (361)
Q Consensus 316 ~g~~~~~d~~~~~~-p~~~g~~~~~a~~~Al~~Agl~--~~dId~ie~~ 361 (361)
.|++..++...+.. +.........++++||++|||+ ++|||++||+
T Consensus 235 ~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~ 283 (386)
T PRK08313 235 HGTAMRTEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIY 283 (386)
T ss_pred EEEEEEecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEec
Confidence 99998877554322 2233456678999999999998 6999999986
|
|
| >PRK06158 thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.2e-17 Score=157.23 Aligned_cols=195 Identities=17% Similarity=0.151 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+.+||+|||+++.+++ ++++++... . . +...++..+|+
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID-----~iv~~~~~~-----------------------~----~---~~~~la~~lGl 73 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD-----GLFTASPDD-----------------------A----L---WGLSVAEYLGI 73 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEecCCC-----------------------C----C---cHHHHHHHcCC
Confidence 57999999999999999988887 888876210 0 0 11247788898
Q ss_pred CC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEe-ecCCCCC---------------hHHHHHHhh-ccccccc---
Q 018076 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAG-GTESSID---------------ALSMAGFCK-SRALTTK--- 268 (361)
Q Consensus 210 ~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvg-g~d~~~~---------------~~~~~~~~~-~~~ls~~--- 268 (361)
++ +.+.+.++|+|+..+|..|+.+|++|.+|+|||+ |.+.... ++....+.. ...+.++
T Consensus 74 ~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~al~a~~ym~ 153 (384)
T PRK06158 74 RPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVSAYALAAARHMH 153 (384)
T ss_pred CCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHHHHHHHHHHHHH
Confidence 75 6778889999999999999999999999999985 5542110 000000000 0000000
Q ss_pred -CC------------------CCCCCC----------------CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeE
Q 018076 269 -YN------------------GTPQEA----------------SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYA 313 (361)
Q Consensus 269 -~~------------------~~~~~~----------------~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a 313 (361)
|+ .||... +.|+. ..++..++|||+++||++++.|++.+.++ +
T Consensus 154 ~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~-~~d~~~~~DGAaAvVL~s~e~A~~l~~~~-v 231 (384)
T PRK06158 154 QYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLS-VRDCCLVTDGAGAVVMVRADRARDLPRPP-V 231 (384)
T ss_pred HHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCc-hhhcCCccCCeEEEEEecHHHHhhcCCCc-E
Confidence 01 223211 12332 25677799999999999999999876654 6
Q ss_pred EEEEEEeecCCCCCC-CCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 314 EVRGYGMSGDAHHIT-QPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 314 ~i~g~~~~~d~~~~~-~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+|.|++..++..... .++........++++||++|||+|+|||++|||
T Consensus 232 ~i~g~~~~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~Ely 280 (384)
T PRK06158 232 YVLGAAAATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELY 280 (384)
T ss_pred EEEEEEEecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEec
Confidence 799998887755433 233334556789999999999999999999986
|
|
| >PRK08235 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.7e-18 Score=161.04 Aligned_cols=196 Identities=22% Similarity=0.259 Sum_probs=136.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ .|++|+..... .+ ..++..++..+|+
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID-----~vi~g~~~~~~-----------------------~~---~~~~~~~~~~~Gl 75 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE-----EVIMGTVLQGG-----------------------QG---QIPSRQAARAAGI 75 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCC-----------------------CC---CCHHHHHHHHcCC
Confidence 57899999999999999998888 89999743210 00 1223346777888
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH-HH------------H---H--h---------
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS-MA------------G---F--C--------- 260 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~-~~------------~---~--~--------- 260 (361)
. -|+++|+.+|+||+.||..|+++|++|.+|++||+|+|....... .. . + .
T Consensus 76 ~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (393)
T PRK08235 76 PWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMVADGLTCAFSGV 155 (393)
T ss_pred CCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhcccccccccCCC
Confidence 4 489999999999999999999999999999999999996332110 00 0 0 0
Q ss_pred hcccccc----cCC------------------C--------------------------CCCCCCc------------C-
Q 018076 261 KSRALTT----KYN------------------G--------------------------TPQEASR------------P- 279 (361)
Q Consensus 261 ~~~~ls~----~~~------------------~--------------------------~~~~~~~------------p- 279 (361)
.++.+++ +|+ . +|+...| |
T Consensus 156 ~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v 235 (393)
T PRK08235 156 HMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDTTIEKLAKLKPV 235 (393)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCCCHHHHhcCCCc
Confidence 0000000 111 0 1222222 1
Q ss_pred CCC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 280 FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 280 fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
|+. ..+...++|||+++||++++.|++.+.+++++|.|++...+.... .......++++||++|||+|+|
T Consensus 236 ~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~~~~~~~~~-----~~~~~~~a~~~al~~agl~~~d 310 (393)
T PRK08235 236 FDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHTAIAVEAKD-----FPRTPGYAINALLEKTGKTVED 310 (393)
T ss_pred ccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccChhh-----hcchHHHHHHHHHHHhCCCHHH
Confidence 111 123444799999999999999999999999999998765432211 1223468999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
||++|+|
T Consensus 311 id~~e~~ 317 (393)
T PRK08235 311 IDLFEIN 317 (393)
T ss_pred CCeehhc
Confidence 9999986
|
|
| >PRK08256 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=159.91 Aligned_cols=199 Identities=18% Similarity=0.167 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|+.+++++||+|||+++++++ ++++|+..+... . ...+...+|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID-----~~~~g~~~~~~~----------------------~-------~~~~~~~lG 67 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQ-----QAYVGYVYGDST----------------------S-------GQRALYEVG 67 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCC-----eeEEEEEeCCcc----------------------h-------hHHHHHHcC
Confidence 468999999999999999988776 566664322100 0 012445689
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH---------HHHHh-----------------
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS---------MAGFC----------------- 260 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~---------~~~~~----------------- 260 (361)
+++ |+++|+++|+|++.||..|+++|++|++|++||+|+|.... +.. +..+.
T Consensus 68 l~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (391)
T PRK08256 68 MTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFDPAPPALR 147 (391)
T ss_pred CCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccccCCccHH
Confidence 988 99999999999999999999999999999999999986321 100 00000
Q ss_pred hccccccc----CC------------------CCCCCCC-cCCC--------------CCCCcccccceeeeEeeCChhh
Q 018076 261 KSRALTTK----YN------------------GTPQEAS-RPFD--------------CGRDGFVIGEGSGVLVLEELEH 303 (361)
Q Consensus 261 ~~~~ls~~----~~------------------~~~~~~~-~pfd--------------~~~~G~v~gEGAaalvL~~~~~ 303 (361)
.++..+++ |+ .+|.... +|.+ ..-+...++|||+++||.+++.
T Consensus 148 ~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~il~s~~~ 227 (391)
T PRK08256 148 MFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEF 227 (391)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEEEEecHHH
Confidence 00000111 11 1232111 1111 1134445799999999999999
Q ss_pred HHhcCCeeeEEEEEEEeecCCCCCCCC-C---CC-cHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 304 AKKRGAKIYAEVRGYGMSGDAHHITQP-H---ID-GKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 304 A~~~g~~~~a~i~g~~~~~d~~~~~~p-~---~~-g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
|++.+.+++++|.|.+...+....... + .. ......+.+++|+++|++++|||++|||
T Consensus 228 a~~~~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~ag~~~~DiD~~ei~ 290 (391)
T PRK08256 228 ARKHGLDRAVEIVAQAMTTDTPSTFDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELH 290 (391)
T ss_pred HHhcCCCCCEEEEEEEEeccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEeec
Confidence 998776678999999887764332111 1 11 2345689999999999999999999986
|
|
| >PLN02644 acetyl-CoA C-acetyltransferase | Back alignment and domain information |
|---|
Probab=99.74 E-value=3.7e-17 Score=157.30 Aligned_cols=196 Identities=24% Similarity=0.313 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+|||+++.+++ +|++|+..... .+ ...+..++..+|+
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID-----~vv~g~~~~~~-----------------------~~---~~~~~~~~~~~Gl 74 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQ-----EVFFGNVLSAN-----------------------LG---QAPARQAALGAGL 74 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCcCC-----------------------cC---CcHHHHHHHhcCC
Confidence 67899999999999999998888 89988632100 00 0123346677888
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH---------------HHHHH--h---------
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL---------------SMAGF--C--------- 260 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~---------------~~~~~--~--------- 260 (361)
. -|.++|+.+|+|++.||..|+++|++|++|++||+|+|.... +. ....+ .
T Consensus 75 ~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (394)
T PLN02644 75 PPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGMLKDGLWDVYNDF 154 (394)
T ss_pred CCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhccccccccccCCC
Confidence 5 377889999999999999999999999999999999775321 10 00000 0
Q ss_pred hccc----ccccCC--------------------CCCCCC-------------CcC------------------------
Q 018076 261 KSRA----LTTKYN--------------------GTPQEA-------------SRP------------------------ 279 (361)
Q Consensus 261 ~~~~----ls~~~~--------------------~~~~~~-------------~~p------------------------ 279 (361)
.++. +.++|+ .+|... ..|
T Consensus 155 ~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~~~~~l~~l~p~ 234 (394)
T PLN02644 155 GMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKFDPAKLRKLRPS 234 (394)
T ss_pred cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCCCHHHHhCCCCc
Confidence 0000 000011 011000 001
Q ss_pred CC------CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 280 FD------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 280 fd------~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
|. ...|...++||++++||++++.|++++.+++++|+|++.+++.... .......+++++|++|||+|+
T Consensus 235 f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agi~~~ 309 (394)
T PLN02644 235 FKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYADAAQAPEL-----FTTAPALAIPKALKHAGLEAS 309 (394)
T ss_pred ccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEEEcCCCCcc-----cchhHHHHHHHHHHHcCCCHH
Confidence 10 0123555799999999999999999999999999999988763211 112335799999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
|||++|+|
T Consensus 310 Did~~Ei~ 317 (394)
T PLN02644 310 QVDYYEIN 317 (394)
T ss_pred HCCEEEeC
Confidence 99999986
|
|
| >PRK06954 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=158.09 Aligned_cols=196 Identities=19% Similarity=0.209 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ .|++|+..... . ...++...+...|+
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID-----~vi~G~~~~~~---------------------~-----~~~~~~~~~l~ag~ 80 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQID-----EVVMGCVLPAG---------------------Q-----GQAPARQAALGAGL 80 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-----EEEEEecCCCc---------------------c-----chHHHHHHHHcCCC
Confidence 67899999999999999998887 89999743210 0 01122223333444
Q ss_pred --CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH---------------HHHH--hhc-cc----
Q 018076 210 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS---------------MAGF--CKS-RA---- 264 (361)
Q Consensus 210 --~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~---------------~~~~--~~~-~~---- 264 (361)
+-|+++|+.+|+||+.|+..|+++|++|.+|++||+|+|.... +.. +..+ ... ..
T Consensus 81 ~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (397)
T PRK06954 81 PLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFLDGLEDAYDKG 160 (397)
T ss_pred CCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcccccccccccC
Confidence 3477999999999999999999999999999999999996431 210 0000 000 00
Q ss_pred ---------ccccCC-------------------CCCCCCC----cCCC-------------------------------
Q 018076 265 ---------LTTKYN-------------------GTPQEAS----RPFD------------------------------- 281 (361)
Q Consensus 265 ---------ls~~~~-------------------~~~~~~~----~pfd------------------------------- 281 (361)
+.++|+ .++.+.. .|++
T Consensus 161 ~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~~~l~~l~~~f 240 (397)
T PRK06954 161 RLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANPEKIPTLKPAF 240 (397)
T ss_pred CCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCHHHHhCCCCcc
Confidence 000111 0111111 1221
Q ss_pred -C-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 282 -C-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 282 -~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
. ..+...++|||+++||++++.|++++.+++++|.|++..... |.....+...++++||+++||+|+||
T Consensus 241 ~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~~~~~~-----~~~~~~~~~~a~~~al~~agl~~~Di 315 (397)
T PRK06954 241 SKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHSTFAQA-----PSKFTTAPVGAIRKLFEKNGWRAAEV 315 (397)
T ss_pred CCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEEecccC-----cccccchHHHHHHHHHHHcCCCHHHC
Confidence 0 012334799999999999999999999999999987765322 11122345789999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
|++|+|
T Consensus 316 d~~ei~ 321 (397)
T PRK06954 316 DLFEIN 321 (397)
T ss_pred CEEehh
Confidence 999986
|
|
| >PRK08170 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.9e-18 Score=163.04 Aligned_cols=196 Identities=22% Similarity=0.323 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+|+|+++++++ +|++|+.... + . ...++..++..+|+
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID-----~vi~g~~~~~--------------------~----~--~~~~a~~v~~~lGl 76 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD-----EVILGCAMPS--------------------P----D--EANIARVVALRLGC 76 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC--------------------C----C--cChHHHHHHHHhCc
Confidence 57899999999999999998888 9999864210 0 0 01234567788999
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH---------------------H-------HH
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS---------------------M-------AG 258 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~---------------------~-------~~ 258 (361)
. -|.++|+.+|+|++.+|..|+++|++|.+|++||+|+|.... |.. + ..
T Consensus 77 ~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (426)
T PRK08170 77 GEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQKLAALGKLRPS 156 (426)
T ss_pred CCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCcccccccccccc
Confidence 4 399999999999999999999999999999999999985221 110 0 00
Q ss_pred Hh-----------------hccccccc----CC---------------C---------------------CCCC------
Q 018076 259 FC-----------------KSRALTTK----YN---------------G---------------------TPQE------ 275 (361)
Q Consensus 259 ~~-----------------~~~~ls~~----~~---------------~---------------------~~~~------ 275 (361)
+. .++..+++ |+ . +|..
T Consensus 157 ~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~~np~a~de~~r 236 (426)
T PRK08170 157 YLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRDGKFYDHDDGVR 236 (426)
T ss_pred ccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCCCCeeccCCCCC
Confidence 00 00000000 11 0 1100
Q ss_pred ---------CCcC-CC-C--C---CCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHH
Q 018076 276 ---------ASRP-FD-C--G---RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAIL 339 (361)
Q Consensus 276 ---------~~~p-fd-~--~---~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~ 339 (361)
..+| |+ . . .|...++|||+++||++++.|++.+.++.++|.+++..... |...+.+...
T Consensus 237 ~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~~~~~~-----~~~~~~~~~~ 311 (426)
T PRK08170 237 PDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALD-----PSQMGLGPVH 311 (426)
T ss_pred CCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEeeEeeeC-----chhhcccHHH
Confidence 0111 11 0 0 34455799999999999999999998888899998776532 2222334578
Q ss_pred HHHHHHHHcCCCCCCcceeecC
Q 018076 340 AMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 340 a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+++++|++|||+|+|||++|||
T Consensus 312 a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 312 AATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHcCCCHHHcCEEEec
Confidence 9999999999999999999997
|
|
| >PRK06065 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5e-17 Score=155.74 Aligned_cols=201 Identities=17% Similarity=0.074 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+|+|+++.+++ ++++++.... +.+ ....+..++..+|+
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID-----~~i~~~~~~~-----------------------~~~--~~~~a~~l~~~lG~ 79 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDID-----CVVIGSAPDA-----------------------FDG--VHMKGEYLSHGSGG 79 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCCc-----------------------ccc--cccHHHHHHHHcCC
Confidence 57999999999999999998887 8888752110 000 01234467788887
Q ss_pred C-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCCh----HHHH------HHh-h--------cccccccC
Q 018076 210 Q-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA----LSMA------GFC-K--------SRALTTKY 269 (361)
Q Consensus 210 ~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~----~~~~------~~~-~--------~~~ls~~~ 269 (361)
. .|.+.|+++|+||..+|..|+.+|++|.+|+|||+|.+..... .... .|. . ...+.++|
T Consensus 80 ~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~~~~Al~a~ry 159 (392)
T PRK06065 80 IRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNLIWIFAMEMHRY 159 (392)
T ss_pred CCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccHHHHHHHHHHHH
Confidence 6 4889999999999999999999999999999999998752110 0000 000 0 01111111
Q ss_pred C----------------------CCCCCCC-cCCCC--------------CCCcccccceeeeEeeCChhhHHhcCCeee
Q 018076 270 N----------------------GTPQEAS-RPFDC--------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIY 312 (361)
Q Consensus 270 ~----------------------~~~~~~~-~pfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g~~~~ 312 (361)
+ .||.... +|.+. .-+...++|||+++||.+++.|++.+.++
T Consensus 160 m~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~e~A~~l~~~~- 238 (392)
T PRK06065 160 MATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASEDLARRYTDTP- 238 (392)
T ss_pred HHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCHHHHHhcCCCC-
Confidence 1 2232211 11110 13455689999999999999999877665
Q ss_pred EEEEEEEeecCCCCCCCC-CCCcHHHHHHHHHHHHHcCCCC--CCcceeecC
Q 018076 313 AEVRGYGMSGDAHHITQP-HIDGKGAILAMTRALKQVVHNV--DGFEQLSIQ 361 (361)
Q Consensus 313 a~i~g~~~~~d~~~~~~p-~~~g~~~~~a~~~Al~~Agl~~--~dId~ie~~ 361 (361)
.+|.|++..++..+.... .........+.+++|++||+++ +|||++|++
T Consensus 239 v~I~g~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~ 290 (392)
T PRK06065 239 VWVEGVGWTLDNTEWPNRDLAYPRYVEFAARMAYKMAGIERPRKEIDVAEPY 290 (392)
T ss_pred EEEEEEEEecCccccccccccccHHHHHHHHHHHHHcCCCCchhhCcEEEec
Confidence 569999887665432221 1223445689999999999985 999999986
|
|
| >PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-17 Score=154.83 Aligned_cols=197 Identities=20% Similarity=0.264 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~d-Ag~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+..++++||++ +|+++.+++ .+++|+..... ..+ ..++..++...|
T Consensus 28 ~~L~~~~~~~al~~~agl~~~~Id-----~vi~g~~~~~~----------------------~~g---~~~ar~~~~~~G 77 (387)
T PRK08947 28 EDLSAHLMRSLLARNPALDPAEID-----DIIWGCVQQTL----------------------EQG---FNIARNAALLAG 77 (387)
T ss_pred HHHHHHHHHHHHHhccCcChHHhC-----eEEEEeccccc----------------------ccc---ccHHHHHHHHcC
Confidence 56888899999995 899988887 89998632100 000 122334666777
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH------HHHh--------hccccc----cc
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM------AGFC--------KSRALT----TK 268 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~------~~~~--------~~~~ls----~~ 268 (361)
+. -|+++|+++|+||+.|+..|+++|++|.+|++||+|+|........ ..+. .++..+ ++
T Consensus 78 l~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 157 (387)
T PRK08947 78 IPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMMGLTAEMLGKM 157 (387)
T ss_pred CCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHHHHHHHHHHHH
Confidence 75 3779999999999999999999999999999999999963321100 0000 000000 00
Q ss_pred CC------------------C--------------------------CCCCCCc------------C-CCC------CCC
Q 018076 269 YN------------------G--------------------------TPQEASR------------P-FDC------GRD 285 (361)
Q Consensus 269 ~~------------------~--------------------------~~~~~~~------------p-fd~------~~~ 285 (361)
|+ . +|+...| | |+. ..+
T Consensus 158 ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~p~~g~lt~~~ 237 (387)
T PRK08947 158 HGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFDPVNGTVTAGT 237 (387)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceeeCCCCcEEccc
Confidence 11 0 1121111 1 121 134
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
...++|||+++||++++.|++.+.+++++|.|++.+....+. .+.+...+++++|++|||+|+|||++|+|
T Consensus 238 ~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~~~~~~~~~-----~~~~~~~a~~~al~~Agl~~~DId~~El~ 308 (387)
T PRK08947 238 SSALSDGASAMLVMSESRAKELGLKPRARIRSMAVAGCDPSI-----MGYGPVPATQKALKRAGLSISDIDVFELN 308 (387)
T ss_pred cCCcCCceEEEEEccHHHHHHCCCCccEEEEEEEEcCcCccc-----ccccHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 555899999999999999999999999999999988532221 12234789999999999999999999997
|
|
| >PRK06059 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.7e-17 Score=157.10 Aligned_cols=203 Identities=18% Similarity=0.189 Sum_probs=136.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||++||+++.+++ .+++++.... . ......+..++..+|
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId-----~vi~~~~~~~--------------------~-----~~~~~~a~~va~~lG 72 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQ-----LVVGADTIRN--------------------G-----YPGFVAGATFAQALG 72 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC--------------------c-----cCCccHHHHHHHHhC
Confidence 378999999999999999887776 7777653210 0 001123456888999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH--H----------HH-----HHh---hcccccc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--S----------MA-----GFC---KSRALTT 267 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~--~----------~~-----~~~---~~~~ls~ 267 (361)
+++ |.++++++|+|++.||..|+++|++|++|++||+|+|...... . +. ++. ..+.+.+
T Consensus 73 ~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~al~a~ 152 (399)
T PRK06059 73 WNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGATNPVYFALLAR 152 (399)
T ss_pred CCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCccHHHHHHHHH
Confidence 987 8999999999999999999999999999999999998632100 0 00 000 0000000
Q ss_pred ----cCC------------------CCCCCCC-cCCC--------------CCCCcccccceeeeEeeCChhhHHhc--C
Q 018076 268 ----KYN------------------GTPQEAS-RPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKR--G 308 (361)
Q Consensus 268 ----~~~------------------~~~~~~~-~pfd--------------~~~~G~v~gEGAaalvL~~~~~A~~~--g 308 (361)
+|+ .||.... +|++ ..-+...++|||+++||.+++.|++. +
T Consensus 153 ~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~~~A~~l~~~ 232 (399)
T PRK06059 153 RRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFARRHLGS 232 (399)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEecHHHHHhhccc
Confidence 011 1222111 1111 01355557999999999999999887 5
Q ss_pred CeeeEEEEEEEeecCCCC--CC------------CCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 309 AKIYAEVRGYGMSGDAHH--IT------------QPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 309 ~~~~a~i~g~~~~~d~~~--~~------------~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
.+..++|.|++...+..+ .. .|.++......+.+++|++|||+++|||++|||
T Consensus 233 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~ 299 (399)
T PRK06059 233 VAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVY 299 (399)
T ss_pred cCCceEEEEEEEecccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeec
Confidence 556689999987653321 11 111112223578999999999999999999996
|
|
| >PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=5e-17 Score=152.63 Aligned_cols=169 Identities=17% Similarity=0.192 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+.+||+++|+++++++ .++++++.... . . ...+..|+..+|
T Consensus 52 ~~~la~~A~~~al~~agl~~~~id-----~vi~~~~~~~~---------------------~----~-~~~~~~i~~~lG 100 (319)
T PRK09352 52 TSDLATEAAKKALEAAGIDPEDID-----LIIVATTTPDY---------------------A----F-PSTACLVQARLG 100 (319)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------C----C-chHHHHHHHHhC
Confidence 478999999999999999888776 78888753210 0 1 123567999999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+.+ +.++|..+|+|++.||..|.++|++|.+|.+||+|+|.. +.. .. ++....++
T Consensus 101 ~~~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~-s~~----------------------~~-~~~~~~~~ 156 (319)
T PRK09352 101 AKNAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKL-SRI----------------------VD-WTDRSTCV 156 (319)
T ss_pred CCCCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhh-ccc----------------------cC-cccCCceE
Confidence 987 889999999999999999999999999999999999972 211 00 11223468
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCCCCC-------------Cc--------HHHHHHHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQPHI-------------DG--------KGAILAMTR 343 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~p~~-------------~g--------~~~~~a~~~ 343 (361)
++||||+++||++.+.. . +.++...+++.+ +..|.. .+ ..+.+++++
T Consensus 157 ~~gDGaaA~ll~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 227 (319)
T PRK09352 157 LFGDGAGAVVLGASEEP-----G----ILSTHLGSDGSYGDLLYLPGGGSRGPASPGYLRMEGREVFKFAVRELAKVARE 227 (319)
T ss_pred EEeccceEEEEEEcCCC-----C----eEEEEEEEcCCCCCeEEeCCCCCCCCCCCCceEECCHHHHHHHHHHHHHHHHH
Confidence 99999999999986542 1 222333333211 111110 11 234568999
Q ss_pred HHHHcCCCCCCcceeecC
Q 018076 344 ALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 344 Al~~Agl~~~dId~ie~~ 361 (361)
+|+++|++++||+++-+|
T Consensus 228 ~l~~~g~~~~di~~~~~h 245 (319)
T PRK09352 228 ALEAAGLTPEDIDWLVPH 245 (319)
T ss_pred HHHHcCCCHHHCCEEEEC
Confidence 999999999999998765
|
|
| >PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-16 Score=150.33 Aligned_cols=174 Identities=17% Similarity=0.228 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++++..+.. .....+..|+..+|
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~dId-----~li~~~~~~~~--------------------------~~p~~a~~v~~~lg 100 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLDDID-----CIICASGTIQQ--------------------------AIPCTASLIQEQLG 100 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCCC--------------------------CCccHHHHHHHHhC
Confidence 467999999999999999988876 78887643211 11245677999999
Q ss_pred CCC---CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 209 FQG---PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 209 l~G---~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
+++ +++.|+.+|+|++.||..|..+|++|.++.+||+++|.. +.. ..++...+
T Consensus 101 l~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~-s~~-----------------------~~~~~~~~ 156 (329)
T PRK07204 101 LQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEIS-SVG-----------------------LNWGQNES 156 (329)
T ss_pred CCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccc-cCC-----------------------CCcccCcc
Confidence 975 789999999999999999999999999999999999962 110 01222345
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeE-------------EEEEEEeecCCCCCCCCC-------CCcH--------HH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYA-------------EVRGYGMSGDAHHITQPH-------IDGK--------GA 337 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a-------------~i~g~~~~~d~~~~~~p~-------~~g~--------~~ 337 (361)
++++||||+++||++.+.. .++++ .+.+.+...+......+. ..+. .+
T Consensus 157 ~~lfGDGAaA~ll~~~~~~----~~il~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (329)
T PRK07204 157 CILFGDGAAAVVITKGDHS----SRILASHMETYSSGAHLSEIRGGGTMIHPREYSEERKEDFLFDMNGRAIFKLSSKYL 232 (329)
T ss_pred eEEEecccEEEEEEEcCCC----CcEEEEEEEEecCCCCceEEecCCcCCCCcccccccccCceEEECCHHHHHHHHHHH
Confidence 7899999999999975432 22221 122211111100000000 1122 24
Q ss_pred HHHHHHHHHHcCCCCCCcceeecC
Q 018076 338 ILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 338 ~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
.++++++|+++|++++|||+|=+|
T Consensus 233 ~~~i~~~L~~~gl~~~did~~~~H 256 (329)
T PRK07204 233 MKFIDKLLMDAGYTLADIDLIVPH 256 (329)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeC
Confidence 578999999999999999998544
|
|
| >PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.4e-17 Score=157.57 Aligned_cols=197 Identities=18% Similarity=0.229 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ .|++|+..... . ...++..++...|+
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID-----~vi~G~~~~~~-----------------------~---~~~~ar~~a~~aGl 78 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE-----QLVFGQVVQMP-----------------------E---APNIAREIVLGTGM 78 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCCCC-----------------------C---ccHHHHHHHHHCCC
Confidence 57889999999999999988887 89999743110 0 12234467788898
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH--H-----------------H---Hhh----
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--A-----------------G---FCK---- 261 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~--~-----------------~---~~~---- 261 (361)
. -|+++|+.+|+||+.|+..|+++|++|.+|++||+|+|.......+ . . +..
T Consensus 79 ~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (428)
T PRK08963 79 NVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQRLKLFSRLRLR 158 (428)
T ss_pred CCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCcccccccccchh
Confidence 5 4999999999999999999999999999999999999964321100 0 0 000
Q ss_pred -----------------cccccc----cCC------------------CC----------------CCC-------CCc-
Q 018076 262 -----------------SRALTT----KYN------------------GT----------------PQE-------ASR- 278 (361)
Q Consensus 262 -----------------~~~ls~----~~~------------------~~----------------~~~-------~~~- 278 (361)
++..++ +|+ .+ |.. ..|
T Consensus 159 ~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a~~~~~D~~~r~ 238 (428)
T PRK08963 159 DLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYKQPLEEDNNIRG 238 (428)
T ss_pred hccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCceeeCCCCCCCC
Confidence 000001 111 01 111 011
Q ss_pred -----------C-CC------CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHH
Q 018076 279 -----------P-FD------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILA 340 (361)
Q Consensus 279 -----------p-fd------~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a 340 (361)
| |+ ...+...++|||+++||++++.|++.+.++.++|.|++...... . .+ .......+
T Consensus 239 ~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~~~~~~~--~-~~-~~~~~~~a 314 (428)
T PRK08963 239 DSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDV--W-QD-MLLGPAYA 314 (428)
T ss_pred CCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEecccCCc--h-hh-hhhHHHHH
Confidence 1 11 01233447999999999999999999999999999988764211 0 01 12334689
Q ss_pred HHHHHHHcCCCCCCcceeecC
Q 018076 341 MTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 341 ~~~Al~~Agl~~~dId~ie~~ 361 (361)
+++||++|||+++|||++|+|
T Consensus 315 ~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 315 TPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHcCCCHHHCCEEEEc
Confidence 999999999999999999997
|
|
| >PRK08142 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-17 Score=155.33 Aligned_cols=196 Identities=18% Similarity=0.134 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+..||+|||+++.+++ +++.+... .. . . ...++..+|+
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID-----~~~~~~~~---------------------~~-----~--~--~~~~~~~lGl 70 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVD-----GYFCAGDA---------------------PG-----L--G--PASMVDYLGL 70 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEcCCC---------------------CC-----c--c--HHHHHHhCCC
Confidence 57899999999999999988887 66542110 00 0 0 1237788998
Q ss_pred CC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCCh---HH----HH------HHhh-cc--------ccc
Q 018076 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDA---LS----MA------GFCK-SR--------ALT 266 (361)
Q Consensus 210 ~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~---~~----~~------~~~~-~~--------~ls 266 (361)
++ +...+.++|+|+..+|..|+.+|++|.+|+|||+|.+..... .. +. .|.. .+ .+.
T Consensus 71 ~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Al~a 150 (388)
T PRK08142 71 KLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPTTHNLYAMCA 150 (388)
T ss_pred CCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccccHHHHHHHH
Confidence 76 677899999999999999999999999999999988752210 00 00 0000 00 000
Q ss_pred cc----CC------------------CCCCCCC-cCCCC--------------CCCcccccceeeeEeeCChhhHHhcCC
Q 018076 267 TK----YN------------------GTPQEAS-RPFDC--------------GRDGFVIGEGSGVLVLEELEHAKKRGA 309 (361)
Q Consensus 267 ~~----~~------------------~~~~~~~-~pfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g~ 309 (361)
++ |+ .||.... +|++. .-++..++|||+++||.+++.|++.+.
T Consensus 151 ~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s~~~A~~l~~ 230 (388)
T PRK08142 151 MRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVRPEIARSLKR 230 (388)
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEecHHHHhhcCC
Confidence 10 11 2332211 12211 135566799999999999999998764
Q ss_pred eeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 310 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 310 ~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+.++|.|++..++..+...++........++++||++||++|+|||++||+
T Consensus 231 -~~v~I~g~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~ely 281 (388)
T PRK08142 231 -PLVKVLGAGEAIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIY 281 (388)
T ss_pred -CCEEEEEEEEecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEe
Confidence 458999999988765544555445566789999999999999999999986
|
|
| >PTZ00455 3-ketoacyl-CoA thiolase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-16 Score=152.65 Aligned_cols=202 Identities=16% Similarity=0.152 Sum_probs=134.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCC--CCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHH---
Q 018076 130 IAYALCAADEALHDAKWLPSD--QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS--- 204 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~--~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is--- 204 (361)
..|+.+++++||+++|+++.+ ++ ++++|+..+... ... ..++..+.
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID-----~vi~G~~~~~~~----------------------~~~--~~~a~~~~~~~ 99 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD-----KVVVGNFLGELF----------------------SSQ--GHLGPAAVGSL 99 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC-----EEEEEecccccc----------------------ccc--cchHHHHHHhc
Confidence 578999999999999999888 87 888887432110 000 01111222
Q ss_pred ----HHcCCCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH-H-----------H-----------
Q 018076 205 ----MKYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL-S-----------M----------- 256 (361)
Q Consensus 205 ----~~lgl~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~-~-----------~----------- 256 (361)
..+|+.+ |+++|+.+|+||+.||..|+++|++|.+|++||+|+|...... . +
T Consensus 100 gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (438)
T PTZ00455 100 GQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTF 179 (438)
T ss_pred cCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcch
Confidence 4456644 8999999999999999999999999999999999998532210 0 0
Q ss_pred HH-Hhh-cccccccCC------------------CCCCCCC--cCCC------------------------CCCCccccc
Q 018076 257 AG-FCK-SRALTTKYN------------------GTPQEAS--RPFD------------------------CGRDGFVIG 290 (361)
Q Consensus 257 ~~-~~~-~~~ls~~~~------------------~~~~~~~--~pfd------------------------~~~~G~v~g 290 (361)
.. |.. +..+.+.++ .+|.... +|.+ .-.|...++
T Consensus 180 ~~~~a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~s 259 (438)
T PTZ00455 180 PCLFAKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVS 259 (438)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCcc
Confidence 00 100 000111000 1232211 1211 123344479
Q ss_pred ceeeeEeeCChhhHHhcCCee----eEEEEEEEeecCCCCCCCC--CCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 291 EGSGVLVLEELEHAKKRGAKI----YAEVRGYGMSGDAHHITQP--HIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 291 EGAaalvL~~~~~A~~~g~~~----~a~i~g~~~~~d~~~~~~p--~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
|||+++||.+++.|++.+.++ .++|+|++...+......+ ...+.. ..+++++|++|||+++|||++|||
T Consensus 260 DGAaA~vl~See~A~~l~~~p~~~~~v~i~g~~~~~~~~~~~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~ 335 (438)
T PTZ00455 260 DGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVH 335 (438)
T ss_pred ccceEEEEecHHHHHhcCCCCCCCccEEEEEEEEecCCcccCccccccchHH-HHHHHHHHHHcCCCHHHCcEeeec
Confidence 999999999999999888776 6899999988764322111 112232 689999999999999999999997
|
|
| >PRK06289 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.4e-16 Score=152.34 Aligned_cols=204 Identities=17% Similarity=0.177 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+|||+++++++ ++++|+..+... .. ...+..... ....++
T Consensus 27 ~eLa~eA~~~AL~dAgl~~~dID-----~vi~g~~~~~~~----------------~~----~~~~~~~~~---~~~~~~ 78 (403)
T PRK06289 27 ADLTREVVDGTLAAAGVDADDIE-----VVHVGNFFGELF----------------AG----QGHLGAMPA---TVHPAL 78 (403)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccccc----------------cc----ccccchHHH---HHhhcC
Confidence 67999999999999999999888 899887432210 00 000011111 112233
Q ss_pred CC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH-H-----HH---HHhh------------cccccc
Q 018076 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL-S-----MA---GFCK------------SRALTT 267 (361)
Q Consensus 210 ~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~-~-----~~---~~~~------------~~~ls~ 267 (361)
.| |++.|+++|+|++.||..|+.+|++|++|+|||+|+|...... . +. .+.. .+..++
T Consensus 79 ~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~ 158 (403)
T PRK06289 79 WGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFARVAD 158 (403)
T ss_pred CCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHHHHHH
Confidence 33 7999999999999999999999999999999999988632211 0 00 0000 001111
Q ss_pred c----CC------------------CCCCCCCc------CCC--------------CCCCcccccceeeeEeeCChhhHH
Q 018076 268 K----YN------------------GTPQEASR------PFD--------------CGRDGFVIGEGSGVLVLEELEHAK 305 (361)
Q Consensus 268 ~----~~------------------~~~~~~~~------pfd--------------~~~~G~v~gEGAaalvL~~~~~A~ 305 (361)
+ |+ .||....+ |.+ ..-+...++|||+++||.+++.|+
T Consensus 159 ~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~e~a~ 238 (403)
T PRK06289 159 EYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASDAYLR 238 (403)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcHHHHH
Confidence 1 11 22322111 111 012344479999999999999998
Q ss_pred hcCC-eeeEEEEEEEeecCCCCCCC------CCC-CcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 306 KRGA-KIYAEVRGYGMSGDAHHITQ------PHI-DGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 306 ~~g~-~~~a~i~g~~~~~d~~~~~~------p~~-~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+.+. ++.++|+|++..++...+.. .++ .-.....+.++||++|||+++|||++|||
T Consensus 239 ~l~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~Agi~~~Didv~el~ 302 (403)
T PRK06289 239 DYADARPIPRIKGWGHRTAPLGLEQKLDRSAGDPYVLPHVRQAVLDAYRRAGVGLDDLDGFEVH 302 (403)
T ss_pred HhccCCCCEEEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCeEEeee
Confidence 8765 56689999998866432211 111 12335679999999999999999999986
|
|
| >PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.71 E-value=8e-16 Score=147.56 Aligned_cols=140 Identities=18% Similarity=0.185 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++++..+. +. .+ ..+..|...+|
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId-----~li~~s~~~~---------------------~~----~p-~~a~~v~~~Lg 111 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE-----LLACGTSQPD---------------------QL----MP-GHASMVHGELG 111 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEECCCC---------------------cC----Ch-HHHHHHHhhCC
Confidence 468999999999999999988887 7888874321 11 11 22357888889
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhh-cccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK-SRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~-~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
++. +.+.|+.+|+|++.||..|.++|++|.++.+||+++|..........|.. .+.+... +...++||+.+..|
T Consensus 112 l~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 187 (378)
T PRK06816 112 APPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAEL----EENPEIAFEKDFLR 187 (378)
T ss_pred CCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhcC----cccCCCCCCCCCCC
Confidence 865 78899999999999999999999999999999999997433332222221 2223211 23467899999999
Q ss_pred ccccceeeeEeeCChhh
Q 018076 287 FVIGEGSGVLVLEELEH 303 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~ 303 (361)
+++||||+|+||+..+.
T Consensus 188 ~~fGDGA~A~vl~~~~~ 204 (378)
T PRK06816 188 WMLSDGAGAVLLENKPR 204 (378)
T ss_pred EeeecccEEEEEEecCC
Confidence 99999999999987543
|
|
| >PRK06365 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.4e-16 Score=151.12 Aligned_cols=201 Identities=16% Similarity=0.157 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+..||+|||+++.+++ +++++..... +.+ .+.....++..+|+
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID-----~vv~~~~~~~-----------------------~~g--~~~~~~~~~~~lGl 87 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID-----GSVASYFSDH-----------------------FQR--QLLAGIMVQDYLGL 87 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-----EEEEeccccc-----------------------ccc--cchhhHHHHHhcCC
Confidence 57899999999999999988887 7777642110 001 01122346778898
Q ss_pred CC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH--HH----------hh--------ccccccc
Q 018076 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA--GF----------CK--------SRALTTK 268 (361)
Q Consensus 210 ~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~--~~----------~~--------~~~ls~~ 268 (361)
.. |+++|+.+|+|+..||..|++.|++|.+|+|||+|+|...+..... .+ .. .+.++++
T Consensus 88 ~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~al~a~r 167 (430)
T PRK06365 88 VPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTGYYAMMAVR 167 (430)
T ss_pred CCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHHHHHHHHHH
Confidence 76 8889999999999999999999999999999999999632211000 00 00 0000111
Q ss_pred ----CC------------------CCCCCCC-cCCC--------------CCCCcccccceeeeEeeCChhhHHhcCCee
Q 018076 269 ----YN------------------GTPQEAS-RPFD--------------CGRDGFVIGEGSGVLVLEELEHAKKRGAKI 311 (361)
Q Consensus 269 ----~~------------------~~~~~~~-~pfd--------------~~~~G~v~gEGAaalvL~~~~~A~~~g~~~ 311 (361)
|+ .+|.... .|++ ...+...++|||+++||.+++.|++.+.++
T Consensus 168 y~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~A~~l~~~p 247 (430)
T PRK06365 168 HMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDKAFEITDKP 247 (430)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHHHHhcCCCC
Confidence 11 1222111 1111 012344479999999999999999877665
Q ss_pred eEEEEEEEeecCCCCCCC-C----------------------CCCcHHHHHHHHHHHHHcCCC--CCCcceeecC
Q 018076 312 YAEVRGYGMSGDAHHITQ-P----------------------HIDGKGAILAMTRALKQVVHN--VDGFEQLSIQ 361 (361)
Q Consensus 312 ~a~i~g~~~~~d~~~~~~-p----------------------~~~g~~~~~a~~~Al~~Agl~--~~dId~ie~~ 361 (361)
.+|.|++..+++..+.. + .........++++||++|||+ ++|||++|||
T Consensus 248 -v~i~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~ 321 (430)
T PRK06365 248 -VLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELH 321 (430)
T ss_pred -eEEEEEEEeccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEee
Confidence 46677777655432211 0 012234468999999999998 7999999986
|
|
| >PRK06157 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-16 Score=151.32 Aligned_cols=200 Identities=18% Similarity=0.150 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+|+|+++.+++ ++++|+....+ ... .....++..+|+
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID-----~v~vg~~~~~~----------------------~~~----~~~~~~a~~lGl 76 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDID-----AAWFGTHYDEI----------------------GSG----KSGTPLSRALRL 76 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc----------------------ccc----chhHHHHHHcCC
Confidence 57899999999999999998888 89998632110 000 011246678898
Q ss_pred CC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH-HH------HHh----------hccccccc--
Q 018076 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS-MA------GFC----------KSRALTTK-- 268 (361)
Q Consensus 210 ~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~-~~------~~~----------~~~~ls~~-- 268 (361)
.+ |.++|+.+|+||+.||..|+..|++|.+|++||+|+|.... +.. .. .+. ....++++
T Consensus 77 ~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~a~~~~ 156 (398)
T PRK06157 77 PNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPGNFAQLASAYA 156 (398)
T ss_pred CCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHHHHHHHHHHHH
Confidence 76 77889999999999999999999999999999999986321 000 00 000 00000000
Q ss_pred --CC----------------------CCCCCCC------------c----CCCCCCCcccccceeeeEeeCChhhHHhcC
Q 018076 269 --YN----------------------GTPQEAS------------R----PFDCGRDGFVIGEGSGVLVLEELEHAKKRG 308 (361)
Q Consensus 269 --~~----------------------~~~~~~~------------~----pfd~~~~G~v~gEGAaalvL~~~~~A~~~g 308 (361)
|+ .+|.... + |+. .-+...++|||+++||.+++.|++.+
T Consensus 157 ~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~-~~d~~~~~DGAaA~vl~s~~~A~~l~ 235 (398)
T PRK06157 157 AKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLG-LFDCCGVSDGAAAAIVTTPEIARALG 235 (398)
T ss_pred HHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhccCCCCCccEEEEEecHHHHHhhC
Confidence 00 1222111 1 211 12555689999999999999999887
Q ss_pred CeeeEEEEEEEeecCCCCCC---CCCCC-cHHHHHHHHHHHHHcCCC--CCCcceeecC
Q 018076 309 AKIYAEVRGYGMSGDAHHIT---QPHID-GKGAILAMTRALKQVVHN--VDGFEQLSIQ 361 (361)
Q Consensus 309 ~~~~a~i~g~~~~~d~~~~~---~p~~~-g~~~~~a~~~Al~~Agl~--~~dId~ie~~ 361 (361)
....++|+|++..++..... ..++. ......+.++||++|||+ ++|||++|||
T Consensus 236 ~~~~v~I~g~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~a~~~AGl~~~~~Did~~Ei~ 294 (398)
T PRK06157 236 KKDPVYVKALQLAVSNGWELQYNGWDGSYFPTTRIAARKAYREAGITDPREELSMAEVH 294 (398)
T ss_pred CCCCeEEEEEEEecccccccccccccccccHHHHHHHHHHHHHcCCCCchhcCCEEEEe
Confidence 65668999998876532111 11111 223467999999999998 7999999996
|
|
| >TIGR02446 FadI fatty oxidation complex, beta subunit FadI | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-16 Score=150.89 Aligned_cols=197 Identities=19% Similarity=0.248 Sum_probs=134.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+++|+++++++ .+++|+..+.. ....++..++...|+
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id-----~vi~G~~~~~~--------------------------~~~~~ar~~~l~aGl 80 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIE-----QLVFGQVVQMP--------------------------EAPNIAREIVLGTGM 80 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCcC--------------------------ccchHHHHHHHhCCC
Confidence 57899999999999999988887 88998743110 012244455555688
Q ss_pred C-C-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH----------------H------------
Q 018076 210 Q-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA----------------G------------ 258 (361)
Q Consensus 210 ~-G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~----------------~------------ 258 (361)
. + |.++|+.+|+||+.|+..|+++|++|.+|++||+|+|.... |+.+. .
T Consensus 81 ~~~~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (430)
T TIGR02446 81 NVHTDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSVLPIGVSKKLAASLVDLNKARTLGQKLKVFSRLGLK 160 (430)
T ss_pred CCCCchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccCCcccccccccccccccccccccCccccccccchhh
Confidence 6 3 89999999999999999999999999999999999997432 21100 0
Q ss_pred --Hh------------hcccccc----cCC-----------------C-----------------CCCCCC-------c-
Q 018076 259 --FC------------KSRALTT----KYN-----------------G-----------------TPQEAS-------R- 278 (361)
Q Consensus 259 --~~------------~~~~ls~----~~~-----------------~-----------------~~~~~~-------~- 278 (361)
+. .++..++ +|+ . +|.... |
T Consensus 161 ~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~a~~A~~~g~~~~ei~p~~~np~a~~~~~D~~~r~ 240 (430)
T TIGR02446 161 DLMPVPPAVAEYSTGLSMGQTAEQMAKTYGITRAEQDALAHRSHTLASQAWRDGKLAGEVMTAFPPPYKQWIAEDNNIRH 240 (430)
T ss_pred hhcccCcccccccCCCcHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceeeeeeecCCceEecccCCCCC
Confidence 00 0000000 011 0 121100 1
Q ss_pred -----------C-CC------CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHH
Q 018076 279 -----------P-FD------CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILA 340 (361)
Q Consensus 279 -----------p-fd------~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a 340 (361)
| |+ ...+...++|||+++||.+++.|++.+.++.++|.|++......... . ......+
T Consensus 241 ~~t~e~~~~~~~i~~p~~g~lt~~~~~~~~DGAaA~il~se~~A~~l~~~p~~~i~~~~~~~~~~~~~--~--~~~~~~a 316 (430)
T TIGR02446 241 NSTLAGYAKLRPAFDRKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVWQD--M--LMGPSYA 316 (430)
T ss_pred CCCHHHHhcCCceecCCCCceechhcCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEeeccCchHh--h--cccHHHH
Confidence 1 11 12344557999999999999999998888888999988663221100 1 1222579
Q ss_pred HHHHHHHcCCCCCCcceeecC
Q 018076 341 MTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 341 ~~~Al~~Agl~~~dId~ie~~ 361 (361)
+++||++|||+++|||++|||
T Consensus 317 ~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 317 TPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred HHHHHHHcCCCHHHCCEEEec
Confidence 999999999999999999997
|
This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli. |
| >PRK06504 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=5.6e-16 Score=148.42 Aligned_cols=197 Identities=17% Similarity=0.188 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHH--HHHHc
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH--VSMKY 207 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~--is~~l 207 (361)
..|+.++++++|+++|+++++++ .+++|+....- .....++.. +..-+
T Consensus 27 ~~L~~~a~~~al~~a~l~~~~Id-----~vi~G~~~~~~-------------------------~~~~~~ar~~~l~~gl 76 (390)
T PRK06504 27 ADLAAQVLDALVDRSGADPALIE-----DVIMGCVSQVG-------------------------EQATNVARNAVLASKL 76 (390)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc-------------------------cccccHHHHHHHHcCC
Confidence 67889999999999999998888 89999743100 000011111 22223
Q ss_pred CCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH---------------HHhh----------
Q 018076 208 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA---------------GFCK---------- 261 (361)
Q Consensus 208 gl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~---------------~~~~---------- 261 (361)
+..-|.++|+.+|+||+.|+..|+++|++|.+|++||+|+|.... |.... .+..
T Consensus 77 ~~~vP~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (390)
T PRK06504 77 PESVPGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRVPMGSPSTLPAKNGLGHYKSPGMEERYPGIQFSQF 156 (390)
T ss_pred CCCCceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCCccccccccccccccccccccccccccCCCCCCHH
Confidence 334599999999999999999999999999999999999996332 21000 0000
Q ss_pred --cccccccCC------------------CCCCC--------------------------------------CCcCCCC-
Q 018076 262 --SRALTTKYN------------------GTPQE--------------------------------------ASRPFDC- 282 (361)
Q Consensus 262 --~~~ls~~~~------------------~~~~~--------------------------------------~~~pfd~- 282 (361)
...+.++|+ .++.. ..+|...
T Consensus 157 ~aae~~a~~ygisre~~d~~A~ksh~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~~De~~r~~~t~e~l~~~~~~~~~ 236 (390)
T PRK06504 157 TGAEMMAKKYGLSKDQLDEFALQSHQRAIAATQAGKFKAEIVPLEITRADGSGEMHTVDEGIRFDATLEGIAGVKLIAEG 236 (390)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHhHHcCCCccccccccccCCCCCceEEccCCCCCCCCCHHHHhcCCCCCCC
Confidence 000011111 00000 1123211
Q ss_pred ----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 283 ----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 283 ----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
-.|...++|||+++||.+++.|++.+.++.++|.+++...... .....+...+++++|+++||+|+|||++
T Consensus 237 g~lt~~n~s~~~DGAaA~vl~s~~~A~~l~~~p~~~i~~~~~~~~~~-----~~~~~~~~~a~~~a~~~agl~~~Did~~ 311 (390)
T PRK06504 237 GRLTAATASQICDGASGVMVVNERGLKALGVKPLARIHHMTVIGGDP-----VIMLEAPLPATERALKKAGMKIDDIDLY 311 (390)
T ss_pred CCCcCccCCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEeecCc-----hhhhccHHHHHHHHHHHcCCCHHHCCEE
Confidence 1244457899999999999999998888877888877654421 1122344679999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
|||
T Consensus 312 Ei~ 314 (390)
T PRK06504 312 EVN 314 (390)
T ss_pred Eec
Confidence 996
|
|
| >PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.8e-15 Score=143.28 Aligned_cols=188 Identities=22% Similarity=0.215 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+.+++++ .+++++...+ ......+..++..+|
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~s~~~~--------------------------~~~p~~a~~v~~~lg 109 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIG-----LLINTSVCRD--------------------------YLEPATACRVHHNLG 109 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCChHHHHHHHHcC
Confidence 467999999999999999888777 7888774311 111235677999999
Q ss_pred CCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
+.. +.+.|..+|+|++.||..|..+|++|.++.+||+++|. .+...-..+.... . +.....+|+....+
T Consensus 110 l~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~-~s~~~~~~~~~~~--~------~~~~~~~~~~~~~~ 180 (338)
T PRK09258 110 LPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGES-AREIVEATIDRLL--A------PETTREDFAQSFAT 180 (338)
T ss_pred CCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecc-cchhccchhhhhc--c------Cccchhhhhhccce
Confidence 963 78999999999999999999999999999999999997 3322111111111 1 11122456666678
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCC--CCC-----CCCc--------HHHHHHHHHHHHHcCCC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHI--TQP-----HIDG--------KGAILAMTRALKQVVHN 351 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~--~~p-----~~~g--------~~~~~a~~~Al~~Agl~ 351 (361)
+++||||+|+||++.+.. ..+. .+.+....+++.+. ... ..++ ..+.++++++|+++|++
T Consensus 181 ~~~GDGA~A~ll~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~ 255 (338)
T PRK09258 181 LTLGSGAAAAVLTRGSLH-PRGH----RLLGGVTRAATEHHELCQGGRDGMRTDAVGLLKEGVELAVDTWEAFLAQLGWA 255 (338)
T ss_pred EEecccceEEEEecCCCC-CCcc----eeeeeeeecCCCcccccccCccceEEcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 899999999999975431 1122 23443333332221 110 0111 23345888999999999
Q ss_pred CCCcceeecC
Q 018076 352 VDGFEQLSIQ 361 (361)
Q Consensus 352 ~~dId~ie~~ 361 (361)
++|||++=+|
T Consensus 256 ~~did~~i~H 265 (338)
T PRK09258 256 VEQVDRVICH 265 (338)
T ss_pred HHHCCEEecC
Confidence 9999998544
|
|
| >PRK07801 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.8e-16 Score=148.66 Aligned_cols=197 Identities=17% Similarity=0.239 Sum_probs=129.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+++++||+|+|+++++++ +|++|+.... .. . ...++..+....++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID-----~vv~g~~~~~-------------------~~-----~-~~~~~~~~~l~~gl 76 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD-----DVIFGCVDTI-------------------GP-----Q-AGNIARTSWLAAGL 76 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC-----EEEEEeeccC-------------------Cc-----c-cccHHHHHHHHcCC
Confidence 56899999999999999998888 8998853100 00 0 00011122223343
Q ss_pred --CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH--H--HH-------------HH-hhccc----
Q 018076 210 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL--S--MA-------------GF-CKSRA---- 264 (361)
Q Consensus 210 --~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~--~--~~-------------~~-~~~~~---- 264 (361)
..|.++|+.+|+||+.|+..|+++|++|.+|++||+|++.... +. . .. .+ ...+.
T Consensus 77 ~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 156 (382)
T PRK07801 77 PEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGWLHRYGDQEVS 156 (382)
T ss_pred CCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcchhhhccCCCCC
Confidence 4688999999999999999999999999999999999984311 11 0 00 00 00010
Q ss_pred -------ccccCC------------------CCCCC----------------------------CCcCCC-----CCCCc
Q 018076 265 -------LTTKYN------------------GTPQE----------------------------ASRPFD-----CGRDG 286 (361)
Q Consensus 265 -------ls~~~~------------------~~~~~----------------------------~~~pfd-----~~~~G 286 (361)
+.++|+ .+|.. ..+|.. ...|.
T Consensus 157 ~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~~~~pl~~~d~ 236 (382)
T PRK07801 157 QFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLVEGGRLTAAVA 236 (382)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCCCCCCcccccC
Confidence 001111 11111 011211 12345
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
..++|||+++||++++.|++.+.+++++|.|++...+.... ...+...++++||++|||+++|||++|+|
T Consensus 237 ~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~a~~~a~~~agi~~~did~~e~~ 306 (382)
T PRK07801 237 SQISDGASAVLLASERAVKRHGLTPRARIHHLSVRGDDPVF-----MLTAPIPATRYALEKTGLSIDDIDVVEIN 306 (382)
T ss_pred CCCCCceEEEEEecHHHHHHCCCCccEEEEEEEEecCChHh-----hccChHHHHHHHHHHcCCCHHHcCEeeec
Confidence 55799999999999999999998888999998766543210 11122579999999999999999999986
|
|
| >PRK06690 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-15 Score=144.79 Aligned_cols=191 Identities=21% Similarity=0.301 Sum_probs=130.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+..+++++++ |++ .+++ .|++|+..+.. ...+..+....|+
T Consensus 26 ~~L~~~a~~~~~~--gi~-~~Id-----~vi~G~~~~~~----------------------------~~~~r~~~~~~Gl 69 (361)
T PRK06690 26 QQLAAPLLTFLSK--GME-REID-----DVILGNVVGPG----------------------------GNVARLSALEAGL 69 (361)
T ss_pred HHHHHHHHHHHHc--cch-hhcC-----EEEEEecCCCc----------------------------chHHHHHHHHcCC
Confidence 5677888888744 886 6777 89999743211 1123335666777
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH-HHHH-----h--hcccccc----cCC----
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS-MAGF-----C--KSRALTT----KYN---- 270 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~-~~~~-----~--~~~~ls~----~~~---- 270 (361)
. -|+++|+++|+||+.|+..|+++|++|++|++||+|+|.... |+. ...+ . .++..++ +|+
T Consensus 70 ~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre 149 (361)
T PRK06690 70 GLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITRE 149 (361)
T ss_pred CCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHH
Confidence 5 499999999999999999999999999999999999997432 210 0000 0 0010110 111
Q ss_pred -----------------CCCC-------------CCC-------------cC-CCC-----CCCcccccceeeeEeeCCh
Q 018076 271 -----------------GTPQ-------------EAS-------------RP-FDC-----GRDGFVIGEGSGVLVLEEL 301 (361)
Q Consensus 271 -----------------~~~~-------------~~~-------------~p-fd~-----~~~G~v~gEGAaalvL~~~ 301 (361)
.++. ... +| |+. ..+...++|||+++||.++
T Consensus 150 ~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~ 229 (361)
T PRK06690 150 MQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEE 229 (361)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecH
Confidence 1111 000 12 321 1233346999999999999
Q ss_pred hhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 302 EHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 302 ~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+.|++.+.++.++|.|++..... |.....+...+++++|+++||+++|||++|+|
T Consensus 230 e~A~~lg~~p~~~i~~~~~~~~~-----~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~ 284 (361)
T PRK06690 230 GQARKLGYKPVLRFVRSAVVGVD-----PNLPGTGPIFAVNKLLNEMNMKVEDIDYFEIN 284 (361)
T ss_pred HHHHHcCCCceEEEEEEEEeccC-----cccchhHHHHHHHHHHHHcCCCHHHcCEeeec
Confidence 99999998888899998876432 22224566889999999999999999999986
|
|
| >TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.6e-15 Score=142.38 Aligned_cols=170 Identities=16% Similarity=0.151 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++++..... .....+.+++..+|
T Consensus 51 ~~~la~~A~~~al~~agl~~~~Id-----~~i~~~~~~~~--------------------------~~~~~a~~l~~~lG 99 (318)
T TIGR00747 51 SSTMGFEAAKRAIENAGISKDDID-----LIIVATTTPDH--------------------------AFPSAACMVQAYLG 99 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCCC--------------------------CCChHHHHHHHHhC
Confidence 467999999999999999888776 88887643210 11124567999999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+++ +++.|..+|+|++.||..|.++|++|.++.+||+++|.. .+. .++. .....+
T Consensus 100 l~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~-~~~----------------------~~~~-~~~~~~ 155 (318)
T TIGR00747 100 IKGIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKL-SST----------------------LDWT-DRGTCV 155 (318)
T ss_pred CCCCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhh-cCc----------------------CCcC-CCCeEE
Confidence 988 889999999999999999999999999999999999962 211 0111 123357
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC---CCCCCC-------C--------------CcHHHHHHHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQPH-------I--------------DGKGAILAMTR 343 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~p~-------~--------------~g~~~~~a~~~ 343 (361)
++||||+++||++.+... . |......+++. ....|. . ....+.+++++
T Consensus 156 ~~GDGAaA~lL~~~~~~~----~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (318)
T TIGR00747 156 LFGDGAGAVVLGESEDPG----G----IISTHLGADGTQGEALYLPAGGRPTSGPSPFITMEGNEVFKHAVRKMGDVVEE 227 (318)
T ss_pred EEecceeEEEEeecCCCC----c----EEEEEEEEcCCCcceEEECCCCcCCCCCCCceEECCHHHHHHHHHHHHHHHHH
Confidence 899999999998765421 1 22333222221 111111 0 01234567899
Q ss_pred HHHHcCCCCCCcceeecC
Q 018076 344 ALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 344 Al~~Agl~~~dId~ie~~ 361 (361)
+|+++|++++||+++-+|
T Consensus 228 ~l~~~g~~~~di~~~~~h 245 (318)
T TIGR00747 228 TLEANGLDPEDIDWFVPH 245 (318)
T ss_pred HHHHcCCCHHHCCEEEEC
Confidence 999999999999999765
|
Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment. |
| >cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-15 Score=146.16 Aligned_cols=203 Identities=19% Similarity=0.225 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..++++||+++|+++++++ .|++|+...... + .+.....+...++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID-----~vi~g~~~~~~~-----------------------g--~~~~~~~~~~~lg 72 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVE-----EACLGQVLGAGE-----------------------G--QNCAQQAAMHAGG 72 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEccCCcc-----------------------c--CcHHHHHHHHcCC
Confidence 467889999999999999988887 889987542210 0 0111112455567
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH------HHH----Hh----------------
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS------MAG----FC---------------- 260 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~------~~~----~~---------------- 260 (361)
+.+ |+++|+++|+|++.||..|+++|++|.+|++||+|+|.... +.. +.. +.
T Consensus 73 ~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~~s~~~~ 152 (393)
T cd00826 73 LQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFALAGQAGA 152 (393)
T ss_pred CCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHHHHHHHH
Confidence 765 99999999999999999999999999999999999986321 100 000 00
Q ss_pred ----hccc-------ccccC-------CCCCCCCC-cCCC-----------------CCCCcccccceeeeEeeCChhhH
Q 018076 261 ----KSRA-------LTTKY-------NGTPQEAS-RPFD-----------------CGRDGFVIGEGSGVLVLEELEHA 304 (361)
Q Consensus 261 ----~~~~-------ls~~~-------~~~~~~~~-~pfd-----------------~~~~G~v~gEGAaalvL~~~~~A 304 (361)
+.|. ++... ..+|.... +|.+ ...+...++|||+++||.+++.|
T Consensus 153 ~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl~S~~~a 232 (393)
T cd00826 153 EAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEA 232 (393)
T ss_pred HHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEEecHHHH
Confidence 0000 00000 00121111 1111 11233446899999999999999
Q ss_pred HhcCC-eeeEEEEEEEeecCCCC-CCCCC----CCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 305 KKRGA-KIYAEVRGYGMSGDAHH-ITQPH----IDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 305 ~~~g~-~~~a~i~g~~~~~d~~~-~~~p~----~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
++.+. ...++|.+.+...+... ...|+ ....+...++++||++|||+++|||++|||
T Consensus 233 ~~l~l~~~~v~i~~~a~~~~~~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~ 295 (393)
T cd00826 233 QKHGLQSKAREIQALEMITDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAH 295 (393)
T ss_pred HHcCCcccccccceEEEEEeeeccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehh
Confidence 98763 12245655555443221 12222 223445899999999999999999999997
|
There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. |
| >PRK09268 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-15 Score=145.89 Aligned_cols=199 Identities=18% Similarity=0.191 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH--c
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK--Y 207 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~--l 207 (361)
..|+.++++++|+++|+++.+++ .+++|+...... ...++..++.. +
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id-----~vv~G~~~~~~~--------------------------~~~~~r~~~l~~gl 80 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLG-----EVVAGAVLKHSR--------------------------DFNLTRECVLGSAL 80 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCCc--------------------------cccHHHHHHHHcCC
Confidence 57889999999999999988888 899997432100 00122233333 4
Q ss_pred CCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH------------------------HH---
Q 018076 208 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA------------------------GF--- 259 (361)
Q Consensus 208 gl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~------------------------~~--- 259 (361)
+...|+++|+++|+||+.|+..|+++|++|.+|++||+|+|.... |..+. .+
T Consensus 81 ~~~~p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (427)
T PRK09268 81 SPYTPAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDAPIAVNEGLRKILLELNRAKTTGDRLKALGKLRPK 160 (427)
T ss_pred CCCCceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCCcccccccccccccccccccccCcccccccccccc
Confidence 546799999999999999999999999999999999999996332 11000 00
Q ss_pred --h-------------hcccccc----cCC------------------C-----------CCCC------CC--------
Q 018076 260 --C-------------KSRALTT----KYN------------------G-----------TPQE------AS-------- 277 (361)
Q Consensus 260 --~-------------~~~~ls~----~~~------------------~-----------~~~~------~~-------- 277 (361)
. .++.+.. +|+ . +|.. ..
T Consensus 161 ~~~~~~~~~~~~~~~~~m~~~ae~~a~~ygisre~~d~~Avksh~~A~~A~~~g~~~~einP~~~~~~D~~~r~~~t~e~ 240 (427)
T PRK09268 161 HLAPEIPRNGEPRTGLSMGEHAAITAKEWGISREAQDELAAASHQNLAAAYDRGFFDDLITPFLGLTRDNNLRPDSSLEK 240 (427)
T ss_pred cccccCccccccccCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccCccCcccCCCCCCCCCHHH
Confidence 0 0000000 111 1 2321 11
Q ss_pred ----cC-CCC-------CCCcccccceeeeEeeCChhhHHhcCCeeeEEE-EEEEeecCCCCCCCCCCCcHHHHHHHHHH
Q 018076 278 ----RP-FDC-------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHITQPHIDGKGAILAMTRA 344 (361)
Q Consensus 278 ----~p-fd~-------~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~~p~~~g~~~~~a~~~A 344 (361)
+| |+. -.|...++|||+++||.+++.|++.+.++.++| .+....++..+ .+.........++++|
T Consensus 241 l~~~~~v~~p~~~g~lt~~n~~~~~DGAaAvvl~s~~~A~~l~~~p~~~i~~~~~~~~~~~~--~~~~~~~~~~~a~~~a 318 (427)
T PRK09268 241 LAKLKPVFGKGGRATMTAGNSTPLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVH--GKEGLLMAPAYAVPRL 318 (427)
T ss_pred HhCCCcccccCCCCceeccccCCCCCceEEEEEecHHHHHHcCCCceEEEEEEEEEcCCccc--ccchhhccHHHHHHHH
Confidence 12 222 123344899999999999999999888886666 55555555321 1111123446799999
Q ss_pred HHHcCCCCCCcceeecC
Q 018076 345 LKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 345 l~~Agl~~~dId~ie~~ 361 (361)
|++|||+++|||++|||
T Consensus 319 ~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 319 LARNGLTLQDFDFYEIH 335 (427)
T ss_pred HHHcCCCHHHCCEEEec
Confidence 99999999999999996
|
|
| >PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-15 Score=142.96 Aligned_cols=170 Identities=18% Similarity=0.213 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++++...+. .....+.+++..+|
T Consensus 53 ~~~la~~A~~~al~~ag~~~~~Id-----~li~~~~~~~~--------------------------~~~~~a~~l~~~lg 101 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDAEDID-----LIIVATTTPDY--------------------------LFPSTASQVQARLG 101 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCChHHHHHHHHhC
Confidence 467999999999999999988777 78887643211 11234567899999
Q ss_pred CC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
++ .+.+.|..+|++++.||..|.++|++|.++.+||+++|.. +.. . .++.....+
T Consensus 102 ~~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~-s~~----------------------~-~~~~~~~~~ 157 (325)
T PRK12879 102 IPNAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERL-SKV----------------------T-DYTDRTTCI 157 (325)
T ss_pred CCCCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhh-cCc----------------------C-CccccCceE
Confidence 97 4889999999999999999999999999999999999862 110 0 011123457
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC----------CCCCC----------CCCc--------HHHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH----------HITQP----------HIDG--------KGAIL 339 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~----------~~~~p----------~~~g--------~~~~~ 339 (361)
++||||+++||++.+.. ..+. +....+++. ....+ ...+ ..+.+
T Consensus 158 ~~GDgAaA~ll~~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (325)
T PRK12879 158 LFGDGAGAVVLEATENE----PGFI----DYVLGTDGDGGDILYRTGLGTTMDRDALSGDGYIVQNGREVFKWAVRTMPK 229 (325)
T ss_pred EEeecceEEEEEecCCC----CCeE----EEEEEEcCCCCCeEEEcCCCCCCCccccccCccEEEcCHHHHHHHHHHHHH
Confidence 89999999999986531 1121 111111110 00000 0111 23456
Q ss_pred HHHHHHHHcCCCCCCcceeecC
Q 018076 340 AMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 340 a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+++++|+++|++++|||+|=+|
T Consensus 230 ~i~~~L~~~g~~~~did~~~~h 251 (325)
T PRK12879 230 GARQVLEKAGLTKDDIDWVIPH 251 (325)
T ss_pred HHHHHHHHcCCCHHHCCEEEEC
Confidence 8899999999999999998654
|
|
| >KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-16 Score=140.11 Aligned_cols=196 Identities=26% Similarity=0.288 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|+-.+++.||+.+.+++.+.. -||+|.-. ...+...++.+.+---|
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~-----eVi~GnVl--------------------------~AnlGQapaRQaalgAG 78 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVA-----EVIFGNVL--------------------------SANLGQAPARQAALGAG 78 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhh-----hhhhcccc--------------------------ccccCcchHHHHHhhcC
Confidence 467888999999999988877554 45666411 11122334444444444
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhh-------------------------
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK------------------------- 261 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~------------------------- 261 (361)
| .=++.+|+--|+||+.|+.+|++.|+.|..|++++||.|+..... +....+
T Consensus 79 lp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP-~~~~~R~g~~~G~~~l~Dgi~~DGL~D~y~~ 157 (396)
T KOG1390|consen 79 LPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP-YLYVARGGVKYGGVQLVDGIVKDGLTDAYDK 157 (396)
T ss_pred CCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCc-chhhhccCcCcCCeeeeechhhcchHHHhcc
Confidence 4 348899999999999999999999999999999999999844433 111111
Q ss_pred --ccccc----ccCC--------------------------------------------CCCCC-----------CCcCC
Q 018076 262 --SRALT----TKYN--------------------------------------------GTPQE-----------ASRPF 280 (361)
Q Consensus 262 --~~~ls----~~~~--------------------------------------------~~~~~-----------~~~pf 280 (361)
+|... .+|+ ...+. ..+|.
T Consensus 158 ~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~~~~~~~l~~v 237 (396)
T KOG1390|consen 158 CHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSNIEKLSKLRPV 237 (396)
T ss_pred CCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccchhhhccccce
Confidence 00000 0000 00000 11221
Q ss_pred CCCCCccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 281 DCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 281 d~~~~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
-...+|.+ +.|||+++||.+.+.+.+.|.+|+|+|+||+...-.. ..-.-+...++.++|++||+..+
T Consensus 238 F~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dAa~~P-----~df~iaP~laipk~lk~aG~~~s 312 (396)
T KOG1390|consen 238 FKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDAATEP-----IDFTIAPALAIPKALKKAGLEQS 312 (396)
T ss_pred eecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhhccCh-----hhcccchHHHHHHHHHHcCcchh
Confidence 11223333 7899999999999999999999999999997654211 11112237899999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
||||+|+|
T Consensus 313 dVd~~EiN 320 (396)
T KOG1390|consen 313 DVDYWEIN 320 (396)
T ss_pred hhhHHhhh
Confidence 99999997
|
|
| >cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-15 Score=140.10 Aligned_cols=170 Identities=19% Similarity=0.249 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++.+++ .+++++..+.. . ....+.+|+..+|
T Consensus 50 ~~~la~~A~~~al~~ag~~~~~Id-----~li~~~~~~~~---------------------~-----~~~~~~~l~~~lg 98 (320)
T cd00830 50 TSDLAVEAAKKALEDAGIDADDID-----LIIVATSTPDY---------------------L-----FPATACLVQARLG 98 (320)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------C-----CCcHHHHHHHHhC
Confidence 478999999999999999888777 78887643210 0 1234567999999
Q ss_pred C-CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 F-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l-~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+ ..+++.|..+|+|++.||.+|.++|++|.++.+||+++|.. +... -|+....++
T Consensus 99 ~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~-s~~~-----------------------~~~~~~~~~ 154 (320)
T cd00830 99 AKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETL-SRIL-----------------------DWTDRSTAV 154 (320)
T ss_pred CCCCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhh-cccc-----------------------CcccCCceE
Confidence 9 55888999999999999999999999999999999999962 1110 033345689
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCCCC------------------CCc--------HHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQPH------------------IDG--------KGAI 338 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~p~------------------~~g--------~~~~ 338 (361)
++||||+++||++.+. +.. |.+....+++.. ...+. ..+ ..+.
T Consensus 155 ~~GDgAaA~ll~~~~~----~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (320)
T cd00830 155 LFGDGAGAVVLEATEE----DPG----ILDSVLGSDGSGADLLTIPAGGSRSPFEDAEGGDPYLVMDGREVFKFAVRLMP 226 (320)
T ss_pred EEeccceEEEEEecCC----CCc----EEEEEEEEcCCCCCeEEeCCCCcCCccccccccCccEEEcChHHHHHHHHhhH
Confidence 9999999999998653 122 333333333221 00010 001 2346
Q ss_pred HHHHHHHHHcCCCCCCcceeecC
Q 018076 339 LAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 339 ~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
++++++|+++|++++|||++-+|
T Consensus 227 ~~i~~~l~~~g~~~~di~~~~~h 249 (320)
T cd00830 227 ESIEEALEKAGLTPDDIDWFVPH 249 (320)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEC
Confidence 78999999999999999998765
|
It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA. |
| >PRK06025 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.9e-15 Score=143.19 Aligned_cols=197 Identities=19% Similarity=0.185 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+..+++++|+++|+++++++ .|++|+.... +.....++..++..-||
T Consensus 30 ~~L~~~~~~~~l~r~~i~~~~id-----~vi~G~~~~~-------------------------g~~g~n~aR~~al~agl 79 (417)
T PRK06025 30 QHLAATVLKALAERNGLNTADVD-----DIIWSTSSQR-------------------------GKQGGDLGRMAALDAGY 79 (417)
T ss_pred HHHHHHHHHHHHHhcCCCHHHCC-----EEEEEcCCCc-------------------------CcccCcHHHHHHHhCCC
Confidence 46778899999999999988887 8999974211 00012244445555555
Q ss_pred --CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHH-----H-----Hhhc-ccccc--------
Q 018076 210 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMA-----G-----FCKS-RALTT-------- 267 (361)
Q Consensus 210 --~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~-----~-----~~~~-~~ls~-------- 267 (361)
+-|+++|+..|+||+.||.+|++.|++|++|++|+||+|+... |+.+. + .... ..+..
T Consensus 80 p~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Mg 159 (417)
T PRK06025 80 DIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLRLRALHPQSHQG 159 (417)
T ss_pred CCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcccccccCCCCHH
Confidence 4599999999999999999999999999999999999998442 32100 0 0000 00000
Q ss_pred --------cCC--------------------------------C---------CCCCC------------CcC-CCC---
Q 018076 268 --------KYN--------------------------------G---------TPQEA------------SRP-FDC--- 282 (361)
Q Consensus 268 --------~~~--------------------------------~---------~~~~~------------~~p-fd~--- 282 (361)
+|+ . +.++. .+| |+.
T Consensus 160 ~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la~L~p~F~~~~~ 239 (417)
T PRK06025 160 VCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLAALKPAFTAIAD 239 (417)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHcCCCCCcccccc
Confidence 011 0 00111 122 431
Q ss_pred ---CCCcc-------------------------cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCc
Q 018076 283 ---GRDGF-------------------------VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG 334 (361)
Q Consensus 283 ---~~~G~-------------------------v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g 334 (361)
..+|. .++|||+++||++++.|++++.+++++|.|++...+.... .+
T Consensus 240 ~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~~a~~~p~~-----~~ 314 (417)
T PRK06025 240 YPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTL-----ML 314 (417)
T ss_pred ccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEEEecCCchh-----hc
Confidence 01344 2699999999999999999999999999999988754322 22
Q ss_pred HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 335 KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 335 ~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
.+...+++++|+++|++++|||++|+|
T Consensus 315 ~~p~~Ai~~aL~~AGl~~~DID~~ei~ 341 (417)
T PRK06025 315 NAPVPAAKKVLAKAGLTKDDIDLWEIN 341 (417)
T ss_pred ccHHHHHHHHHHHcCCCHHHCcEEEEc
Confidence 234689999999999999999999986
|
|
| >PRK07855 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=9.4e-15 Score=140.11 Aligned_cols=195 Identities=19% Similarity=0.127 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+.+||+|||++.++++ ++++++.. . . . ...++..+|+
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID-----~~~~~~~~-~-----------------------~----~---~~~l~~~lGl 68 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD-----GLVTFTMD-T-----------------------N----P---EIAVARALGI 68 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEecCc-c-----------------------c----c---HHHHHHHCCC
Confidence 56899999999999999988887 77764310 0 0 0 0237788999
Q ss_pred CC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeec--CCCCChH------------H---HHHHhh-ccc-----
Q 018076 210 QG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGT--ESSIDAL------------S---MAGFCK-SRA----- 264 (361)
Q Consensus 210 ~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~--d~~~~~~------------~---~~~~~~-~~~----- 264 (361)
++ +...|.++|+|+..+|..|+.+|++|.+|+|||.|. +...... . ...+.. .+.
T Consensus 69 ~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 148 (386)
T PRK07855 69 GELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWSYPHGLLTPAA 148 (386)
T ss_pred CCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhhhhcCCCChHH
Confidence 76 345789999999999999999999999999999887 2100000 0 000000 110
Q ss_pred ----cccc----CC------------------CCCCCCC--cCCCCC--------------CCcccccceeeeEeeCChh
Q 018076 265 ----LTTK----YN------------------GTPQEAS--RPFDCG--------------RDGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 265 ----ls~~----~~------------------~~~~~~~--~pfd~~--------------~~G~v~gEGAaalvL~~~~ 302 (361)
+.++ |+ .||.... +|++.+ -+...++|||+++||.+++
T Consensus 149 ~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDGAaAvvl~see 228 (386)
T PRK07855 149 WVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDGAVALVVTSAE 228 (386)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCceEEEEEecHH
Confidence 0011 11 2343332 233211 3455589999999999999
Q ss_pred hHHhcCCeeeEEEEEEEeecCCCCCC-----CCCCC-cHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 303 HAKKRGAKIYAEVRGYGMSGDAHHIT-----QPHID-GKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 303 ~A~~~g~~~~a~i~g~~~~~d~~~~~-----~p~~~-g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
.|++.+.++ ++|.|++..++..... .++.. ......++++||++|||+++|||++|||
T Consensus 229 ~A~~l~~~p-v~I~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 229 RARDLKQRP-AVIKAAAQGSGADQYMMTSYYRDDITGLPEMGLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHhhCCCCC-EEEEEEEEecCCccccccccccccccccchHHHHHHHHHHHcCCCHHHCcEEEec
Confidence 998877666 6899998876433111 11111 2344689999999999999999999986
|
|
| >PRK06066 acetyl-CoA acetyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-14 Score=137.33 Aligned_cols=197 Identities=18% Similarity=0.174 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHCC-CCC-CCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 130 IAYALCAADEALHDAK-WLP-SDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg-~~~-~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
..|+.+|+.+||+||| +++ ++++ ++++++. ... ... . .....+...+
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId-----~~~~~~~-~~~------------------~~~----~---~~~~~~~~~l 74 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVD-----SFISCQE-DFW------------------EGI----A---IADEFAPDQI 74 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCC-----EEEEecC-ccc------------------Ccc----c---ccchhHHHHc
Confidence 5799999999999999 986 6887 8887541 100 000 0 0111255667
Q ss_pred CCC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH---H------Hhh---------c-ccccc
Q 018076 208 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA---G------FCK---------S-RALTT 267 (361)
Q Consensus 208 gl~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~---~------~~~---------~-~~ls~ 267 (361)
|+. .|.+.+ |+|+..++..|+.+|++|.+|+|||.|.+......... . |.. . +...+
T Consensus 75 g~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~~~al~a~ 151 (385)
T PRK06066 75 GGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHFIAGLDAV 151 (385)
T ss_pred ccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHHHHHHHHH
Confidence 774 466665 88999999999999999999999999987421100000 0 000 0 00111
Q ss_pred cCC----------------------CCCCCCC-cCCCC--------------CCCcccccceeeeEeeCChhhHHhcCCe
Q 018076 268 KYN----------------------GTPQEAS-RPFDC--------------GRDGFVIGEGSGVLVLEELEHAKKRGAK 310 (361)
Q Consensus 268 ~~~----------------------~~~~~~~-~pfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g~~ 310 (361)
+|+ .||.... +|++. ..|...++|||+++||.+++.|++.+.+
T Consensus 152 rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~a~~l~~~ 231 (385)
T PRK06066 152 KFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEVAKKLTDD 231 (385)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHHHHhcCCC
Confidence 111 2332211 11111 1455668999999999999999988777
Q ss_pred eeEEEEEEEeecCCCCCCCCCC-CcHHHHHHHHHHHHHcCCC--CCCcceeecC
Q 018076 311 IYAEVRGYGMSGDAHHITQPHI-DGKGAILAMTRALKQVVHN--VDGFEQLSIQ 361 (361)
Q Consensus 311 ~~a~i~g~~~~~d~~~~~~p~~-~g~~~~~a~~~Al~~Agl~--~~dId~ie~~ 361 (361)
+. +|+|++..++.......+. .......+.++||++|||+ ++|||++|||
T Consensus 232 pv-~I~g~g~~~~~~~~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~ 284 (385)
T PRK06066 232 PV-WIKGIGWSTESSNLETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVD 284 (385)
T ss_pred CE-EEEEEEEecCCcccccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEe
Confidence 64 8999988765433221111 2333457999999999998 6999999986
|
|
| >PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.3e-14 Score=135.05 Aligned_cols=118 Identities=20% Similarity=0.230 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++++..+.. . . ..+..++..+|
T Consensus 96 ~~~La~~Aa~~aL~~agi~~~dId-----~li~~s~~~~~----------------------~----~-~~a~~v~~~LG 143 (379)
T PLN02326 96 LTSLAVEAAKKALEMAGVDPEDVD-----LVLLCTSSPDD----------------------L----F-GSAPQVQAALG 143 (379)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCc----------------------c----C-cHHHHHHHHhC
Confidence 468999999999999999888776 77777643210 0 0 12446888899
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+++ +++.|..+|++++.||..|.++|++|.++.+||+++|.. +.. . .|+...+.+
T Consensus 144 ~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~-s~~----------------------~-~~~d~~~~~ 199 (379)
T PLN02326 144 CTNALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADAL-SRY----------------------V-DWTDRGTCI 199 (379)
T ss_pred CCCCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechh-cCC----------------------C-CccccCceE
Confidence 865 678899999999999999999999999999999999861 111 0 122234567
Q ss_pred cccceeeeEeeCChh
Q 018076 288 VIGEGSGVLVLEELE 302 (361)
Q Consensus 288 v~gEGAaalvL~~~~ 302 (361)
++||||+|+||++.+
T Consensus 200 lfGDGAaAvlL~~~~ 214 (379)
T PLN02326 200 LFGDGAGAVVLQACD 214 (379)
T ss_pred EEcceeEEEEEEEcC
Confidence 899999999999754
|
|
| >CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.8e-14 Score=132.78 Aligned_cols=168 Identities=14% Similarity=0.243 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .|++|+..... .+ . .+..++..+|
T Consensus 51 ~~~la~~A~~~aL~~ag~~~~dId-----~vi~~s~~~~~---------------------~~----~--~~~~v~~~Lg 98 (326)
T CHL00203 51 LTKLAAEAANKALDKAHMDPLEID-----LIILATSTPDD---------------------LF----G--SASQLQAEIG 98 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC---------------------CC----c--hHHHHHHHhC
Confidence 467999999999999999988887 88888643210 00 0 1345788888
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+++ +++.|..+|+|++.||..|.++|++|.++.+||+|+|.. +.. .+++...+.+
T Consensus 99 ~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~-s~~-----------------------~~~~~~~~~~ 154 (326)
T CHL00203 99 ATRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTL-SKW-----------------------IDWSDRKTCI 154 (326)
T ss_pred CCCCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhh-hCc-----------------------CCcccCCceE
Confidence 875 678999999999999999999999999999999999861 111 0112223568
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC-----C-------------CCCC-------CCc--------
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-----I-------------TQPH-------IDG-------- 334 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-----~-------------~~p~-------~~g-------- 334 (361)
++||||+|+||++.+. .. +.+....+++.. + ..|. ..+
T Consensus 155 ~fgDga~A~ll~~~~~-----~~----~~~~~~~t~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 225 (326)
T CHL00203 155 LFGDGAGAAIIGASYE-----NS----ILGFKLCTDGKLNSHLQLMNKPVNNQSFGTTKLPQGQYQSISMNGKEVYKFAV 225 (326)
T ss_pred EEcceeeEEEEEEcCC-----CC----eEEEEEEEcCCCcceEEecCCCCCcccccccccccCCcceEEECCHHHHHHHH
Confidence 8999999999987442 11 222222222210 0 0010 011
Q ss_pred HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 335 KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 335 ~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
..+.++++++|+++|++++|||++=+|
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~h 252 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILH 252 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 123457899999999999999997443
|
|
| >PRK06840 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.4e-14 Score=131.88 Aligned_cols=168 Identities=15% Similarity=0.151 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .+++.++... .......+.+|+..+|
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dId-----~li~~~~~~~-------------------------~~~~p~~a~~l~~~lG 102 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAID-----VVIYIGSEHK-------------------------DYPVWSSAPKIQHEIG 102 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCCC-------------------------CCCCCchHHHHHHHhC
Confidence 468999999999999999988776 6665432110 0111123467888999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHc-CCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQF-GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~-G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
++. +++.|..+|++++.||..|.++|++ |.++.+||++.|.. +.. .. |+....+
T Consensus 103 l~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~-s~~----------------------~~-~~~~~~~ 158 (339)
T PRK06840 103 AKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYRN-SDL----------------------VD-YDNPRTR 158 (339)
T ss_pred CCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeeccc-ccc----------------------cC-cCCCCee
Confidence 965 7888999999999999999999999 99999999988751 110 00 1111223
Q ss_pred c--cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC-------------CCCCC-------------CC-----
Q 018076 287 F--VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-------------ITQPH-------------ID----- 333 (361)
Q Consensus 287 ~--v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-------------~~~p~-------------~~----- 333 (361)
+ ++||||+|+||++.+. +.. |.+....+++.. ...+. +.
T Consensus 159 ~~~~~GDgAaA~ll~~~~~----~~~----il~~~~~t~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (339)
T PRK06840 159 FMFNFAAGGSAALLKKDAG----KNR----ILGSAIITDGSFSEDVRVPAGGTKQPASPETVENRQHYLDVIDPESMKER 230 (339)
T ss_pred eeccCCCceeEEEEEecCC----CCc----eEEEEEEEcCCccceEEecCCCcCCCCcccccccccceEEEcCcHHHHHH
Confidence 2 3699999999987532 122 233222222210 00000 00
Q ss_pred -----cHHHHHHHHHHHHHcCCCCCCccee
Q 018076 334 -----GKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 334 -----g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
-..+.++++++|+++|++++|||++
T Consensus 231 ~~~~~~~~~~~~i~~~L~~~gl~~~did~~ 260 (339)
T PRK06840 231 LDEVSIPNFLKVIREALRKSGYTPKDIDYL 260 (339)
T ss_pred hHhhHHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence 0124578999999999999999997
|
|
| >cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.2e-13 Score=129.97 Aligned_cols=170 Identities=15% Similarity=0.083 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .+++++..... . ....+..|+..+|
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id-----~li~~~~~~~~---------------------~-----~~~~~~~i~~~lg 96 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIG-----LLIVATESPID---------------------K-----GKSAATYLAELLG 96 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------C-----CccHHHHHHHHcC
Confidence 467999999999999999988887 88888743210 0 1234567888999
Q ss_pred C-CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 F-QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l-~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+ ..+++.|+.+|+|++.||..|.++|++|.++.+||+++|...... ...+.+++
T Consensus 97 ~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~-------------------------~~~~~~~~ 151 (324)
T cd00827 97 LTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL-------------------------DEGSALEP 151 (324)
T ss_pred CCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc-------------------------cCCCCccc
Confidence 8 468999999999999999999999999999999999999621111 12345789
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---------CCC-------------CCC--------CcHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---------ITQ-------------PHI--------DGKGA 337 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---------~~~-------------p~~--------~g~~~ 337 (361)
++||||+++||++.+... ... |.+....+++.. ... .+. .-..+
T Consensus 152 ~~gdgaaA~ll~~~~~~~--~~~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (324)
T cd00827 152 TLGDGAAAMLVSRNPGIL--AAG----IVSTHSTSDPGYDFSPYPVMDGGYPKPCKLAYAIRLTAEPAGRAVFEAAHKLI 225 (324)
T ss_pred cccCceEEEEEecCcccc--cCC----ceeeeeecccccccCccceeccCCCcchhhhhhcceeecCCccchHHHHhHHH
Confidence 999999999999865420 111 222222222110 000 010 02445
Q ss_pred HHHHHHHHHHcCCCCCCcceeecC
Q 018076 338 ILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 338 ~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
.++++++|+++|++ +||+++-+|
T Consensus 226 ~~~~~~~l~~~~~~-~~i~~~~~h 248 (324)
T cd00827 226 AKVVRKALDRAGLS-EDIDYFVPH 248 (324)
T ss_pred HHHHHHHHHHcccc-cccceeecc
Confidence 77889999999999 999998664
|
They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues. |
| >KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1e-14 Score=126.77 Aligned_cols=196 Identities=22% Similarity=0.322 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCCC
Q 018076 131 AYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQ 210 (361)
Q Consensus 131 ~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~ 210 (361)
.++.+|...||.|+++..++++ ..-+|-++|.+..+.. .-+.+|++
T Consensus 31 d~a~ea~tkal~da~ikys~vq-qa~vgyvfgdstcgqr---------------------------------aiyevgmt 76 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSEVQ-QAVVGYVFGDSTCGQR---------------------------------AIYEVGMT 76 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHHHH-hhhheeeecCCccchH---------------------------------HHHhcccc
Confidence 3677899999999999888775 7777888886544332 22347888
Q ss_pred C-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccccccc---------------------
Q 018076 211 G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK--------------------- 268 (361)
Q Consensus 211 G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~--------------------- 268 (361)
| |.+.|++.|++|..||.+|.+.|++|..|+||+.|.|. +.+-++......+++..+
T Consensus 77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfek-m~~gsl~~k~~dra~p~dkhi~~m~e~ygl~a~pmaaqm 155 (408)
T KOG1406|consen 77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEK-MERGSLSNKAADRALPVDKHISVMSETYGLEAAPMAAQM 155 (408)
T ss_pred CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhh-hCCcccchhhhhccCcchhhHHHHHhhccCCCCcchHHH
Confidence 8 99999999999999999999999999999999999985 222111111101111000
Q ss_pred -----------------------CCCCCCCCCcCCCCCCCccc---------------------ccceeeeEeeCChhhH
Q 018076 269 -----------------------YNGTPQEASRPFDCGRDGFV---------------------IGEGSGVLVLEELEHA 304 (361)
Q Consensus 269 -----------------------~~~~~~~~~~pfd~~~~G~v---------------------~gEGAaalvL~~~~~A 304 (361)
|.++......||+.-++-|. .+||+++.||.++...
T Consensus 156 fgnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~dflt~lqccptsdgaaaailaseafv 235 (408)
T KOG1406|consen 156 FGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDFLTKLQCCPTSDGAAAAILASEAFV 235 (408)
T ss_pred hhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHHHHHhhcCCCCCchHHHHHhHHHHH
Confidence 11233344567665544443 6999999999999999
Q ss_pred HhcCCeeeE-EEEEEEeecCCCCCCCCC----CCc-HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 305 KKRGAKIYA-EVRGYGMSGDAHHITQPH----IDG-KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 305 ~~~g~~~~a-~i~g~~~~~d~~~~~~p~----~~g-~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
++.|....+ +|.|..+.+|..+.-... ..| .-..++.++.+++.|++|+||++||+|
T Consensus 236 ~k~gl~~qaveivg~em~td~ps~faeks~ikm~gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 236 RKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred HhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 888766544 678888877754321100 011 223678899999999999999999997
|
|
| >PRK07937 lipid-transfer protein; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.6e-13 Score=129.68 Aligned_cols=193 Identities=13% Similarity=0.063 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+.+||+|||+++.+++ +++.+.. +. +... .+.. ..+...+|+
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID-----~~~~~~~-~~------------------~~~~----~~~~---~~~~~~~G~ 73 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIG-----FWCSGSS-DY------------------LAGR----AFSF---ISAIDSIGA 73 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcc-cc------------------cccc----ccch---hhHHhhccC
Confidence 57999999999999999998886 6654431 00 0000 0000 113344565
Q ss_pred C-C-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-----------------hHHHHHHhhccccccc--
Q 018076 210 Q-G-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-----------------ALSMAGFCKSRALTTK-- 268 (361)
Q Consensus 210 ~-G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-----------------~~~~~~~~~~~~ls~~-- 268 (361)
. + |...+. ++|..||..|+.+|++|.+|+|||.|.+.... |.............++
T Consensus 74 ~~~~~~~~v~---~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~a~~ym 150 (352)
T PRK07937 74 VPPINESHVE---MDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQARAGL 150 (352)
T ss_pred CCCCceEEec---CcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHHHHHHH
Confidence 2 2 233343 46888999999999999999999999874211 0000000000000111
Q ss_pred --CC------------------CCCCCCCcCCCC--------------CCCcccccceeeeEeeCChhhHHhcCCeeeEE
Q 018076 269 --YN------------------GTPQEASRPFDC--------------GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE 314 (361)
Q Consensus 269 --~~------------------~~~~~~~~pfd~--------------~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~ 314 (361)
|+ .||....+ ++. .-+...++|||+++||.+++.|++.+.++ ++
T Consensus 151 ~~yG~t~e~lA~vavk~r~nA~~NP~A~~r-it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~~p-v~ 228 (352)
T PRK07937 151 DAGKWTEEQMAEVAARSRADARRNPSAEPS-ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRERP-AW 228 (352)
T ss_pred HHhCCCHHHHHHHHHHHHHHHhhCchhhcc-CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCCCc-EE
Confidence 11 23433222 111 13444589999999999999999888777 89
Q ss_pred EEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHH-cCCCCCCcceeecC
Q 018076 315 VRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ-VVHNVDGFEQLSIQ 361 (361)
Q Consensus 315 i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~-Agl~~~dId~ie~~ 361 (361)
|.|++..++.......+... ..++++++++ ||++|+|||++||+
T Consensus 229 I~g~~~~~~~~~~~~~d~~~---~~~~~~a~~~aAgi~~~diD~~Ei~ 273 (352)
T PRK07937 229 ITGIEHRIESPSLGARDLTR---SPSTALAAEAATGGDAGGVDVAELH 273 (352)
T ss_pred EEEEEEeeCCcccccccccc---HHHHHHHHHHhcCCCHHHCCEEEEe
Confidence 99999887655432222211 3345556666 59999999999986
|
|
| >PRK08257 acetyl-CoA acetyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.5e-13 Score=131.55 Aligned_cols=200 Identities=16% Similarity=0.172 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHCCCC--CCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 130 IAYALCAADEALHDAKWL--PSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~--~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
..|+.+|+++||+|||++ ..+++ +++++..... . .+.....++..+
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID-----~v~v~~~~~~------------------------~---~~~~~~~la~~l 75 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID-----SVAVVNQLSW------------------------R---YRDPPGLLAERL 75 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC-----EEEEeccccc------------------------c---ccCHHHHHHHHc
Confidence 578999999999999998 88887 8887753210 0 112235688888
Q ss_pred CCCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH----------------------------H
Q 018076 208 GFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA----------------------------G 258 (361)
Q Consensus 208 gl~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~----------------------------~ 258 (361)
|+.. +......++.++..+|..|+..|++|++|+|||+|+|...+...+. .
T Consensus 76 Gl~p~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (498)
T PRK08257 76 GADPARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQSTATKLRKAGEKLDWTPQDEGPLADRGGDPRPMASP 155 (498)
T ss_pred CCCCcceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccccchhccccccccccccccccccccccccccccch
Confidence 9864 3444556788888999999999999999999999988622110000 0
Q ss_pred Hh-hccccc---------c----cCC----------------------CCCCC--------------------CCcCCCC
Q 018076 259 FC-KSRALT---------T----KYN----------------------GTPQE--------------------ASRPFDC 282 (361)
Q Consensus 259 ~~-~~~~ls---------~----~~~----------------------~~~~~--------------------~~~pfd~ 282 (361)
+. ..+... + +|+ .||.. .+-||..
T Consensus 156 ~e~~~G~~~p~~~yal~a~ay~~~~G~t~e~~~a~~a~l~~~~~~~Aa~NP~A~~r~~~t~eevl~~~~~~rmIa~Pl~~ 235 (498)
T PRK08257 156 AELRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKNPHAWIPRERSAEEIVTPTPDNRMIAWPYTK 235 (498)
T ss_pred hhhhcCCCCcchHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHhhCHHHhhCCCCCHHHHhcccCCCCeeeCCccH
Confidence 00 000000 0 000 12211 1123332
Q ss_pred CCCcccccceeeeEeeCChhhHHhcCC--eeeEEEEEEEeecCCCCCCC-CCC-CcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 283 GRDGFVIGEGSGVLVLEELEHAKKRGA--KIYAEVRGYGMSGDAHHITQ-PHI-DGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 283 ~~~G~v~gEGAaalvL~~~~~A~~~g~--~~~a~i~g~~~~~d~~~~~~-p~~-~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
--......|||+++||.+++.|++.+. ...++|.|++..++...+.. ++. .......+.++||++|||+++|||++
T Consensus 236 ldca~~~~DGaaAvil~S~e~A~~l~~~~~~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~ 315 (498)
T PRK08257 236 LMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAF 315 (498)
T ss_pred hhcCCCCcccceEEEEeeHHHHHhcCCCCCceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEE
Confidence 222223799999999999999998762 22478999999887654322 222 23444679999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
||+
T Consensus 316 ely 318 (498)
T PRK08257 316 DLY 318 (498)
T ss_pred Eec
Confidence 985
|
|
| >TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative | Back alignment and domain information |
|---|
Probab=99.49 E-value=7e-13 Score=125.66 Aligned_cols=167 Identities=19% Similarity=0.226 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+++|+++||+++|+++++++ .+++++..+.. . . ...+..++..+|
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID-----~li~~s~~~~~---------------------~----~-p~~a~~v~~~LG 98 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG-----AVYVGSESHPY---------------------A----V-KPTATIVAEAIG 98 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCc---------------------c----c-cchHHHHHHHcC
Confidence 468999999999999999988887 88887643211 1 1 122457888899
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
+. -+++.|..+|+++..||..|..+|++|.++.+||++.|.. +. . +. + ..-
T Consensus 99 l~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~-~~--------------~----~~------~--~~~ 151 (345)
T TIGR00748 99 ATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTA-QG--------------A----PG------D--ALE 151 (345)
T ss_pred CCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeec-cc--------------C----CC------c--cCc
Confidence 85 3788899999999999999999999999999999999962 10 0 11 1 112
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEE-eecCCCC---C-CC--CC----CC-----cHHHHHHHHHHHHHcCC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG-MSGDAHH---I-TQ--PH----ID-----GKGAILAMTRALKQVVH 350 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~-~~~d~~~---~-~~--p~----~~-----g~~~~~a~~~Al~~Agl 350 (361)
+..||||+++||++.+.. ..+.+.. ...++.. . .. |. .. ......+++++|+++|+
T Consensus 152 ~~~GDGAaA~vl~~~~~~--------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gl 223 (345)
T TIGR00748 152 YTAGAGGAAYIIGEKNTV--------AYFEGTYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFHHVVTAAKGLMEKLGL 223 (345)
T ss_pred ccCCCceEEEEEccCCcc--------eEeecccceecccccccccCCCcCCCcCCeecChHHHHHHHHHHHHHHHHHcCC
Confidence 457999999999864311 1222221 1111110 0 00 10 00 12234688899999999
Q ss_pred CCCCcceeecC
Q 018076 351 NVDGFEQLSIQ 361 (361)
Q Consensus 351 ~~~dId~ie~~ 361 (361)
+++|||++=+|
T Consensus 224 ~~~did~~i~H 234 (345)
T TIGR00748 224 TPEDFDYAVFH 234 (345)
T ss_pred CHHHcCEEEeC
Confidence 99999998554
|
Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound. |
| >PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.6e-13 Score=126.17 Aligned_cols=170 Identities=16% Similarity=0.158 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .+++++..++ ......+.+|+..||
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~d--------------------------~~~p~~a~~v~~~Lg 100 (326)
T PRK05963 52 LSDLAASAGDMALSDAGIERSDIA-----LTLLATSTPD--------------------------HLLPPSAPLLAHRLG 100 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCC--------------------------CCCCcHHHHHHHHhC
Confidence 468999999999999999988887 8888874321 111234567999999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
+.. +++.|..+|++++.||..|..+|++|. +.+||+++|.. +.. + .| +....++
T Consensus 101 ~~~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~-s~~----------~------------~~-~~~~~~~ 155 (326)
T PRK05963 101 LQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANIL-SRR----------I------------NM-AERASAV 155 (326)
T ss_pred CCCCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechh-hcc----------C------------Cc-cccCceE
Confidence 854 789999999999999999999999985 88999988851 100 1 11 1123478
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC----------CCCC--------C-----CCc--------HH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH----------ITQP--------H-----IDG--------KG 336 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~----------~~~p--------~-----~~g--------~~ 336 (361)
++||||+|+||++.+.. +..+ .+....+++.+ ...| . ..+ ..
T Consensus 156 lfGDgA~A~ll~~~~~~---~~~~----l~~~~~t~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (326)
T PRK05963 156 LFADAAGAVVLAPSAKA---NSGV----LGSQLISDGSHYDLIKIPAGGSARPFAPERDASEFLMTMQDGRAVFTEAVRM 228 (326)
T ss_pred EEeecceEEEEEecCCC---CCce----EEEEEEEcCCCCCeEEeCCCCcCCCCcccccccccceEecCCHHHHHHHHHH
Confidence 89999999999864421 1111 11222221110 0000 0 011 23
Q ss_pred HHHHHHHHHHHcCCCCCCcceeecC
Q 018076 337 AILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 337 ~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+.++++++|+++|++++|||+|=+|
T Consensus 229 ~~~~~~~~L~~~gl~~~did~~~~h 253 (326)
T PRK05963 229 MSGASQNVLASAAMTPQDIDRFFPH 253 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeC
Confidence 4568889999999999999987543
|
|
| >PRK04262 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.2e-13 Score=125.08 Aligned_cols=167 Identities=18% Similarity=0.227 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++++..+.. ..+ ..+..++..+|
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~dId-----~li~~s~~~~~-------------------------~~p-~~a~~v~~~Lg 99 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPKEIG-----AVYVGSESHPY-------------------------AVK-PTATIVAEALG 99 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCc-------------------------ccc-cHHHHHHHHcC
Confidence 467999999999999999988887 78887643211 011 12347888899
Q ss_pred CCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
++. +++.+..+|++++.+|..|..+|++|.++.+||++.|.... . +... + -
T Consensus 100 l~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~~~~-------------~------~~~~---~-----~ 152 (347)
T PRK04262 100 ATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADTAQG-------------A------PGDA---L-----E 152 (347)
T ss_pred CCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeecc-------------C------CCCC---C-----C
Confidence 964 67889999999999999999999999999999999986100 0 1110 1 1
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEE-eecCCCC-CC-----CCC----CC-----cHHHHHHHHHHHHHcCC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG-MSGDAHH-IT-----QPH----ID-----GKGAILAMTRALKQVVH 350 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~-~~~d~~~-~~-----~p~----~~-----g~~~~~a~~~Al~~Agl 350 (361)
+..||||+++||+..+. ..+|.+.. ...+... +. .|. .. -..+.++++++|+++|+
T Consensus 153 ~~~GDGA~A~ll~~~~~--------~~~i~~~~~~~~d~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl 224 (347)
T PRK04262 153 YTAAAGGAAFIIGKEEV--------IAEIEATYSYTTDTPDFWRREGEPYPRHGGRFTGEPAYFKHIISAAKGLMEKLGL 224 (347)
T ss_pred CcCCCCcEEEEEecCcc--------cceeeccccccccchhhcCCCCCcCCCcCceecchHHHHHHHHHHHHHHHHHhCc
Confidence 34599999999986431 12333321 1122211 00 010 00 13556789999999999
Q ss_pred CCCCcceeecC
Q 018076 351 NVDGFEQLSIQ 361 (361)
Q Consensus 351 ~~~dId~ie~~ 361 (361)
+++|||++=+|
T Consensus 225 ~~~dId~~v~H 235 (347)
T PRK04262 225 KPSDYDYAVFH 235 (347)
T ss_pred CHHHhceeecC
Confidence 99999997443
|
|
| >TIGR02845 spore_V_AD stage V sporulation protein AD | Back alignment and domain information |
|---|
Probab=99.47 E-value=8.4e-13 Score=120.33 Aligned_cols=169 Identities=18% Similarity=0.208 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||++||+++++++ .+++|+.. + ....+..++..+|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID-----~IIvGdl~---------------------------~--Q~~~As~vA~~LG 95 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVD-----FFLAGDLL---------------------------N--QIITANFVARDLG 95 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeCCC---------------------------C--cccHHHHHHHHhC
Confidence 357999999999999999988887 78877511 0 0124667888888
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCC--CCCCCc
Q 018076 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPF--DCGRDG 286 (361)
Q Consensus 209 l~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pf--d~~~~G 286 (361)
+ |.+.|.++|+|+..||..|..+|++|.+|.+||++.+...+......| | ..| .+....
T Consensus 96 I--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErqfr~-------------p----~eyg~q~~~ta 156 (327)
T TIGR02845 96 I--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQFRY-------------P----TEYGVQKPPTA 156 (327)
T ss_pred C--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhhccc-------------c----cccccCCCCee
Confidence 7 889999999999999999999999999999999999873322211110 1 012 223456
Q ss_pred ccccceeeeEeeCChhhHH-hcCCeeeEEEEEEEeecCCCCCCCCCCCc----HHHHHHHHHHHHHcCCCCCCccee
Q 018076 287 FVIGEGSGVLVLEELEHAK-KRGAKIYAEVRGYGMSGDAHHITQPHIDG----KGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~-~~g~~~~a~i~g~~~~~d~~~~~~p~~~g----~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
..+++||+++||++.+.-. -.+.+ .+.|..++.. .|.-.| .+....|.+=|++.|.+|+|.|.|
T Consensus 157 ~~tgdGAGA~vl~~~~~~~~i~~~t-~gkv~d~g~~-------d~~nmgaamapaa~dti~~h~~d~~~~~~~yd~i 225 (327)
T TIGR02845 157 QWTVTGAGAVLLASTGGGPRITSAT-IGKVVDYGIT-------DPLDMGAAMAPAAADTIEAHFKDTGRSVDDYDLI 225 (327)
T ss_pred eEEEcccEEEEEeecCCCCceEEEE-EEEEEecCCC-------CcccchhhhhHHHHHHHHHHHHHcCCChhhccEE
Confidence 7899999999998753211 11111 1344444433 233223 344677899999999999999987
|
Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation. |
| >PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.7e-12 Score=121.86 Aligned_cols=118 Identities=12% Similarity=0.078 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .+++++..++ ......+..|+..||
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dId-----~lI~~t~t~d--------------------------~~~P~~a~~v~~~Lg 108 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSLD-----ALIVVTQSPD--------------------------FFMPSTACYLHQLLN 108 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC--------------------------CCCCcHHHHHHHHhC
Confidence 468999999999999999988887 8888875432 223456778999999
Q ss_pred CCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
++. +++.|..+|++++.+|..|..+|++|..+ +||+++|.. +.. ..| +.....
T Consensus 109 ~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~-S~~----------------------~~~-~d~~~~ 163 (353)
T PRK12880 109 LSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTL-SKF----------------------IHP-KNMNLA 163 (353)
T ss_pred CCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhh-hcc----------------------CCc-ccCCce
Confidence 963 67899999999999999999999999999 888888751 110 111 112235
Q ss_pred ccccceeeeEeeCChh
Q 018076 287 FVIGEGSGVLVLEELE 302 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~ 302 (361)
.++||||+|+||++.+
T Consensus 164 ~lFGDGAaA~vl~~~~ 179 (353)
T PRK12880 164 PIFGDGVSATLIEKTD 179 (353)
T ss_pred eeecccceEEEEEecC
Confidence 6899999999998643
|
|
| >KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.5e-13 Score=114.52 Aligned_cols=188 Identities=24% Similarity=0.425 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeC----CCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHH
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGG----GIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 204 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 204 (361)
.+.|...+++.||..+++..+.++ .|++|+ +..++ +++
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD-----~VI~GNV~aSSsDgI---------------------------------Yl~ 69 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVD-----HVIMGNVLASSSDGI---------------------------------YLA 69 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcc-----eEEEeeeeeccCCce---------------------------------Eee
Confidence 356778899999999999988776 556554 22111 233
Q ss_pred HHcCC------CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCC-ChHHH--------------------H
Q 018076 205 MKYGF------QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI-DALSM--------------------A 257 (361)
Q Consensus 205 ~~lgl------~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~--------------------~ 257 (361)
++.|| .-|..+|+.=|.||.++|-.+++.|.-|.++++|+||+|... .|+.. .
T Consensus 70 RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~LW~ 149 (396)
T KOG1391|consen 70 RHVGLRVGVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDSLWV 149 (396)
T ss_pred eccccccCCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhhHhh
Confidence 33333 247899999999999999999999999999999999998521 11110 0
Q ss_pred HH----hh--cc---------------------ccccc----------CCCC----------------CCCCCcC-----
Q 018076 258 GF----CK--SR---------------------ALTTK----------YNGT----------------PQEASRP----- 279 (361)
Q Consensus 258 ~~----~~--~~---------------------~ls~~----------~~~~----------------~~~~~~p----- 279 (361)
++ .+ ++ ..|+. ++++ -++..||
T Consensus 150 sLtD~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~TT~E 229 (396)
T KOG1391|consen 150 SLTDQYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQTTLE 229 (396)
T ss_pred hccchhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccchHH
Confidence 00 00 00 00000 0000 0111111
Q ss_pred --------CCCCCCccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHH
Q 018076 280 --------FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRA 344 (361)
Q Consensus 280 --------fd~~~~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~A 344 (361)
|. .||.+ ++|||+++|+.+++..++.+.+|+++|.++....- .|...|-+..-+|+.+
T Consensus 230 ~L~KLppvFk--KdG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays~vGc-----dP~IMGIGPvPAI~~v 302 (396)
T KOG1391|consen 230 QLQKLPPVFK--KDGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYSVVGC-----DPSIMGIGPVPAISGV 302 (396)
T ss_pred HHhhCCchhc--cCCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheeeeecc-----ChhhccccCcHHHHHH
Confidence 22 34554 68999999999999999999999999999876532 2333344447899999
Q ss_pred HHHcCCCCCCcceeecC
Q 018076 345 LKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 345 l~~Agl~~~dId~ie~~ 361 (361)
|+.+|++.+|||++|+|
T Consensus 303 LKksGlkl~DiDl~EvN 319 (396)
T KOG1391|consen 303 LKKSGLKLKDIDLVEVN 319 (396)
T ss_pred HHHcCCcccccceEEec
Confidence 99999999999999986
|
|
| >PLN03169 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=1e-11 Score=119.42 Aligned_cols=177 Identities=10% Similarity=0.038 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
....|+.+|+++||+++|+++++++ .|++++.. + ......+..|+..|
T Consensus 105 ~~~~La~~Aa~~aL~~ag~~~~dId-----~lI~~t~t-~--------------------------~~~P~~a~~l~~~L 152 (391)
T PLN03169 105 AVTQMAVEASLACIKEWGRPVSDIT-----HLVYVSSS-E--------------------------ARLPGGDLYLAKQL 152 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEECcC-C--------------------------CCCCcHHHHHHHHh
Confidence 3457999999999999999988877 77877742 1 11223456889999
Q ss_pred CCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|++.. .+.+..+|+++++||..|..+|++|..+.|||+++|.. +.. +.. + ...+ ++...
T Consensus 153 Gl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~-s~~----~~~-----------~-~~~~-~~d~~ 214 (391)
T PLN03169 153 GLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETT-ILG----FRP-----------P-SPDR-PYDLV 214 (391)
T ss_pred CcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcC-hhh----ccC-----------C-Cccc-hhhhh
Confidence 99753 47889999999999999999999999999999999862 111 000 0 0011 12233
Q ss_pred CcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEe----ecC----------CCC----CCCCCCCcHHHHHHHHHHHH
Q 018076 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM----SGD----------AHH----ITQPHIDGKGAILAMTRALK 346 (361)
Q Consensus 285 ~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~----~~d----------~~~----~~~p~~~g~~~~~a~~~Al~ 346 (361)
...++||||+|+||+..+... ....++ .+...+. .++ +.. ...|..-...+..+++++|+
T Consensus 215 ~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~l~~~~~~~ip~~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~~~L~ 292 (391)
T PLN03169 215 GAALFGDGAAAVIIGADPIPV-SESPFF-ELHTAIQQFLPGTEKTIDGRLTEEGINFKLGRELPQKIEDNIEGFCKKLMK 292 (391)
T ss_pred hhhhccCceEEEEEecCCCcc-cCCcce-EEEeeeeeEcCCCccccCceecCCceEEEECcHHHHHHHHHHHHHHHHHHH
Confidence 466899999999998754321 011111 2222211 000 000 00011112345667899999
Q ss_pred HcCCCCCCcc
Q 018076 347 QVVHNVDGFE 356 (361)
Q Consensus 347 ~Agl~~~dId 356 (361)
++|++++|||
T Consensus 293 ~~gl~~~did 302 (391)
T PLN03169 293 KAGLVEKDYN 302 (391)
T ss_pred HcCCCCCCCC
Confidence 9999999888
|
|
| >PLN03172 chalcone synthase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.6e-11 Score=115.39 Aligned_cols=182 Identities=13% Similarity=0.086 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
-...|+.+|+++||+++|+++++++ .++++++.+. . + ...+.+|+..|
T Consensus 101 ~a~~La~~Aa~~aL~~ag~~~~dId-----~ii~~t~t~~----------------------~----~-P~~a~~l~~~L 148 (393)
T PLN03172 101 EVPKLGKEAAAKAIKEWGQPKSKIT-----HLVFCTTSGV----------------------D----M-PGADYQLTKLL 148 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC----------------------c----C-chHHHHHHHHh
Confidence 3457999999999999999988776 7777775431 1 1 24677899999
Q ss_pred CCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|++.. .+.+..+|++++.+|..|.+++++|....+||+++|.+ +. .+ . . ++.. -.+.--
T Consensus 149 Gl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~-S~-~~---~-----~------~~d~--~~~~~v 210 (393)
T PLN03172 149 GLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEIT-AV-TF---R-----G------PSDT--HLDSLV 210 (393)
T ss_pred CCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehh-hh-hh---c-----c------cccc--cHHhhh
Confidence 99864 35678999999999999999999999999999999962 21 00 0 0 0000 000012
Q ss_pred CcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEe----ecCCC---CCC-----------CCCCCcHHHHHHHHHHHH
Q 018076 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM----SGDAH---HIT-----------QPHIDGKGAILAMTRALK 346 (361)
Q Consensus 285 ~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~----~~d~~---~~~-----------~p~~~g~~~~~a~~~Al~ 346 (361)
...++||||+|+||+..+... ..++.-+|.+... .+++. .+. .|..-...+...+++.|+
T Consensus 211 ~~~LFGDGAaAvVl~~~~~~~--~~~~~~~i~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~~~~~L~ 288 (393)
T PLN03172 211 GQALFGDGAAAVIIGADPDTK--IERPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFA 288 (393)
T ss_pred ccchhcCceEEEEEecCCCCc--ccCceeEEeeeccEEecCCcccccceEEcCCcEEEEechHHHHHHHHHHHHHHHHhh
Confidence 357799999999998754321 0112224444431 12211 111 111113455677889999
Q ss_pred HcCCCCCCcceeecC
Q 018076 347 QVVHNVDGFEQLSIQ 361 (361)
Q Consensus 347 ~Agl~~~dId~ie~~ 361 (361)
+.|++..||+++=+|
T Consensus 289 ~~gl~~~di~~~~~H 303 (393)
T PLN03172 289 PIGINDWNSIFWIAH 303 (393)
T ss_pred hcCCCccccceEEec
Confidence 999999999987443
|
|
| >cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-11 Score=116.62 Aligned_cols=182 Identities=14% Similarity=0.154 Sum_probs=119.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
.....|+.+|+++||+++|+++++++ .++++++.+ ......+..|...
T Consensus 83 ~~~~~la~~Aa~~aL~~a~~~~~~Id-----~li~~s~~~---------------------------~~~P~~a~~i~~~ 130 (361)
T cd00831 83 EEARELAEEAARGALDEAGLRPSDID-----HLVVNTSTG---------------------------NPTPSLDAMLINR 130 (361)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEECCCC---------------------------CCCCCHHHHHHHH
Confidence 34568999999999999999988877 788877432 1123355688899
Q ss_pred cCCCC--Cccccc-cchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCC
Q 018076 207 YGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (361)
Q Consensus 207 lgl~G--~~~~v~-~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 283 (361)
+|++. +++.|. .+|++++.||..|..+|++|..+.+||+++|.. +.. +. ++. ..+.-
T Consensus 131 lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~-s~~----------~~------~~d---~~~~~ 190 (361)
T cd00831 131 LGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELC-SLW----------YR------GPD---HRSML 190 (361)
T ss_pred hCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeecc-cce----------eC------CCC---cHHHh
Confidence 99973 578898 899999999999999999999999999999862 211 00 000 00000
Q ss_pred CCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEee--------------cCCCCCC----CCCCCcHHHHHHHHHHH
Q 018076 284 RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--------------GDAHHIT----QPHIDGKGAILAMTRAL 345 (361)
Q Consensus 284 ~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~--------------~d~~~~~----~p~~~g~~~~~a~~~Al 345 (361)
-..+++||||+|+||++.+..... ......+.+.... ..+.+.. .+......+.++++++|
T Consensus 191 ~~~~lfGDgaaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~~L 269 (361)
T cd00831 191 VGNALFGDGAAAVLLSNDPRDRRR-ERPLFELVRAASTLLPDSEDAMGWHLGEEGLTFVLSRDVPRLVEKNLERVLRKLL 269 (361)
T ss_pred hhhhhccCCceEEEEEcCCCcccc-cccceeeecccceeeecCCCceEEEEEcceEEEEeChhHHHHHHHHHHHHHHHHh
Confidence 135789999999999986543110 0111222222111 0010100 00001235567899999
Q ss_pred HHc--CCCCCCcceeecC
Q 018076 346 KQV--VHNVDGFEQLSIQ 361 (361)
Q Consensus 346 ~~A--gl~~~dId~ie~~ 361 (361)
+++ |++++|||++=+|
T Consensus 270 ~~~~~g~~~~did~~~~H 287 (361)
T cd00831 270 ARLGIGLFKLAFDHWCVH 287 (361)
T ss_pred ccccCCCccccceEEEEC
Confidence 999 9999999988554
|
PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions. |
| >PLN03171 chalcone synthase-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.4e-11 Score=116.04 Aligned_cols=126 Identities=13% Similarity=0.121 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
+....|++.|+++||+++|+++++++ .|+++|..+. . + ...+..+...
T Consensus 106 ~~a~~la~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~----------------------~----~-P~~a~~v~~~ 153 (399)
T PLN03171 106 DAVPELAAEAAKKAIAEWGRPAADIT-----HLVVTTNSGA----------------------H----I-PGVDFRLVPL 153 (399)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC----------------------C----C-CchHHHHHHH
Confidence 34557999999999999999988887 8888875431 1 1 2345678889
Q ss_pred cCCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCC
Q 018076 207 YGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (361)
Q Consensus 207 lgl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 283 (361)
||++.. .+.+..+|++++++|..|..+|++|..+.|||+++|.. +... . +.... -++..
T Consensus 154 LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~-s~~~----------~------~~d~~-~~~~~ 215 (399)
T PLN03171 154 LGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEIT-LLLF----------N------GPDEG-CFQTL 215 (399)
T ss_pred hCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecc-cccc----------C------CCCcc-cHHhh
Confidence 999753 45666799999999999999999999999999999961 1110 0 00000 01111
Q ss_pred CCcccccceeeeEeeCChh
Q 018076 284 RDGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 284 ~~G~v~gEGAaalvL~~~~ 302 (361)
-.+.++||||+++||++.+
T Consensus 216 v~~~LFGDGAaA~vl~~~~ 234 (399)
T PLN03171 216 LNQGLFGDGAAAVIVGADA 234 (399)
T ss_pred hccccccCccEEEEEecCC
Confidence 1367899999999999754
|
|
| >PLN03170 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=5e-11 Score=114.80 Aligned_cols=181 Identities=12% Similarity=0.082 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++.+..+. . ....+.+|+..||
T Consensus 106 a~~La~~Aa~~AL~~ag~~~~dId-----~lI~~T~Tg~----------------------~-----~Ps~a~~l~~~LG 153 (401)
T PLN03170 106 VPKLGKAAAQKAIKEWGQPKSKIT-----HLVFCTTSGV----------------------D-----MPGADYQLTKMLG 153 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC----------------------C-----CChHHHHHHHHhC
Confidence 346999999999999999988776 7777774321 1 1346778999999
Q ss_pred CCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 209 FQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 209 l~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
++.. .+.+..+|++++.+|..|.+++++|....|||+++|.+ +. . |. . ++. .+ ++....
T Consensus 154 l~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~-S~-~---~~-----~------~~~-~~-~~~~~~ 215 (401)
T PLN03170 154 LRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEIT-AV-T---FR-----G------PSE-SH-LDSMVG 215 (401)
T ss_pred cCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehh-hh-c---cC-----C------ccc-ch-hhhhhh
Confidence 9764 57899999999999999999999999999999999962 21 0 00 0 100 00 111223
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEee----c----------CCCCCC----CCCCCcHHHHHHHHHHHHH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS----G----------DAHHIT----QPHIDGKGAILAMTRALKQ 347 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~----~----------d~~~~~----~p~~~g~~~~~a~~~Al~~ 347 (361)
..++||||+|+||+..+... ...+..++.+.+.. . .|.++. .|..-...+...++++|++
T Consensus 216 ~~LFGDGAaAvVl~~~~~~~--~~~~~~~l~~~~~~~~p~~~~~~~~~i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~ 293 (401)
T PLN03170 216 QALFGDGAAAVIVGADPDER--VERPLFQLVSASQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIERSLEEAFKP 293 (401)
T ss_pred hhhhhceeEEEEEecCCccc--ccCCceEEeeccceEecCCcccccceEEcCCeEEEEehHHHHHHHHHHHHHHHHHHHh
Confidence 56899999999998743210 01111233322111 0 111000 0111134456688999999
Q ss_pred cCCCCCCcceeecC
Q 018076 348 VVHNVDGFEQLSIQ 361 (361)
Q Consensus 348 Agl~~~dId~ie~~ 361 (361)
+|++++||+++=+|
T Consensus 294 ~gl~~~di~~~v~H 307 (401)
T PLN03170 294 LGITDYNSIFWVAH 307 (401)
T ss_pred cCCCccccCeEEec
Confidence 99999999987443
|
|
| >KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-11 Score=110.38 Aligned_cols=191 Identities=23% Similarity=0.371 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH-cCC-
Q 018076 132 YALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK-YGF- 209 (361)
Q Consensus 132 l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~-lgl- 209 (361)
|+..+....+++.++++..+. -+++|+-.... ......+++.+ -|+
T Consensus 64 Ll~~vl~a~ie~t~~dp~~ig-----di~vG~vL~pg---------------------------~ga~e~R~a~~~ag~P 111 (435)
T KOG1389|consen 64 LLAAVLRAVIEKTNLDPSLIG-----DIVVGTVLAPG---------------------------SGASECRMAAFYAGFP 111 (435)
T ss_pred HHHHHHHHHHhhcCCCHHHhc-----ceeeeeccCCC---------------------------cchHHHHHHHHHcCCC
Confidence 445566677899999887765 56667632111 01222233332 233
Q ss_pred -CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChH--HH--------HHHhh-------ccccccc---
Q 018076 210 -QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL--SM--------AGFCK-------SRALTTK--- 268 (361)
Q Consensus 210 -~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~--~~--------~~~~~-------~~~ls~~--- 268 (361)
+-|..+|+.-|+||++|+..-...|+.|.+|+-|.+|+|+..+.. .+ ..|.+ +|..+..
T Consensus 112 ~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCllpmGitsEnva~ 191 (435)
T KOG1389|consen 112 ETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCLLPMGITSENVAE 191 (435)
T ss_pred cccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcccccccchHHHHH
Confidence 448889999999999999999999999999999999999733221 11 11110 1111110
Q ss_pred -CC-------------------------------------CCCCC-----------CCcC-------------CCCCCCc
Q 018076 269 -YN-------------------------------------GTPQE-----------ASRP-------------FDCGRDG 286 (361)
Q Consensus 269 -~~-------------------------------------~~~~~-----------~~~p-------------fd~~~~G 286 (361)
++ .+|.+ ..|| |- .||
T Consensus 192 rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~klkpvFk--kdG 269 (435)
T KOG1389|consen 192 RFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLAKLKPVFK--KDG 269 (435)
T ss_pred HhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHhhcchhhh--cCC
Confidence 00 01111 1121 21 223
Q ss_pred cc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceee
Q 018076 287 FV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLS 359 (361)
Q Consensus 287 ~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie 359 (361)
.. .+|||++++|.+...|-+.|.+++++.+.+....- .|...|-+..-||.++|+.+||..+|||++|
T Consensus 270 ttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~~vGv-----~P~iMGiGPavAIp~alk~aGL~v~did~FE 344 (435)
T KOG1389|consen 270 TTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFAAVGV-----PPAIMGIGPAVAIPKALKAAGLEVDDIDLFE 344 (435)
T ss_pred ccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeeeeecC-----CHHHcCCCchhhhHHHHHHcCCcccccceee
Confidence 33 79999999999999999999999999998876543 3344455558899999999999999999999
Q ss_pred cC
Q 018076 360 IQ 361 (361)
Q Consensus 360 ~~ 361 (361)
||
T Consensus 345 IN 346 (435)
T KOG1389|consen 345 IN 346 (435)
T ss_pred hh
Confidence 97
|
|
| >PLN03173 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.2e-11 Score=114.87 Aligned_cols=181 Identities=13% Similarity=0.072 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+.+||+++|+++++++ .+++.+..+. . + ...+.+|+..+|
T Consensus 102 a~~La~~Aa~~AL~~ag~~~~dId-----~li~~t~t~~----------------------~----~-P~~a~~l~~~LG 149 (391)
T PLN03173 102 VPKLGKEAAAKAIKEWGQPKSKIT-----HLVFCTTSGV----------------------D----M-PGADYQLTKLLG 149 (391)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC----------------------c----c-cHHHHHHHHHhC
Confidence 347999999999999999988877 7777775321 1 1 246678999999
Q ss_pred CCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 209 FQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 209 l~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
++.. .+.+..+|++++.+|..|.++++++....|||+++|.+ +.. |. . ++.. -.+..-.
T Consensus 150 l~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~-S~~----~~-----~------~~d~--~~~~~v~ 211 (391)
T PLN03173 150 LRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEIT-AVT----FR-----G------PSDT--HLDSLVG 211 (391)
T ss_pred CCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehh-hhh----hC-----C------cccc--chhhhhh
Confidence 9764 45789999999999999999999999999999999962 210 00 0 0000 0011123
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEe----ecC----------CCC--CC--CCCCCcHHHHHHHHHHHHH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM----SGD----------AHH--IT--QPHIDGKGAILAMTRALKQ 347 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~----~~d----------~~~--~~--~p~~~g~~~~~a~~~Al~~ 347 (361)
..++||||+|+||+..+.. ... .+.-+|.+... .++ |.+ +. .|..-...+...++++|++
T Consensus 212 ~~LFGDGAaAvvl~~~~~~-~~~-~~~~~l~~~~~~~~~~t~~~~~~~i~~~G~~~~l~~~vp~~~~~~~~~~i~~~L~~ 289 (391)
T PLN03173 212 QALFGDGAAAIIIGSDPVL-GVE-KPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKP 289 (391)
T ss_pred hhhhcCceEEEEEeCCCCC-CcC-CcceEEEeeeeEEecCCccceeeEEEcCceEEEEecHHHHHHHHHHHHHHHHHHHh
Confidence 5779999999999874321 001 11113333221 111 111 10 1111234566788999999
Q ss_pred cCCCCCCcceeecC
Q 018076 348 VVHNVDGFEQLSIQ 361 (361)
Q Consensus 348 Agl~~~dId~ie~~ 361 (361)
+|++++||+++=+|
T Consensus 290 ~gl~~~di~~~v~H 303 (391)
T PLN03173 290 LGISDWNSLFWIAH 303 (391)
T ss_pred cCCCccccCeEEEC
Confidence 99999999987544
|
|
| >PRK08304 stage V sporulation protein AD; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.6e-11 Score=107.57 Aligned_cols=166 Identities=20% Similarity=0.200 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+.+||++||+++++++ .+|+|+..+ . ...+..++..+|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID-----~lI~Gdll~---------------------------Q--~~sAs~vA~~LG 101 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID-----YLLAGDLLN---------------------------Q--IISANFAARELG 101 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCC---------------------------C--cchHHHHHHHhC
Confidence 357999999999999999988887 888885210 0 123556777787
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCccc
Q 018076 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288 (361)
Q Consensus 209 l~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v 288 (361)
+ |.+.|.++|+++..||.+|..+|++|.+|.+||++++...+..--+.|. . .-+.-+|- .-..
T Consensus 102 I--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerqfr~P------~-----eyg~qrp~----taqw 164 (337)
T PRK08304 102 I--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQFRFP------T-----EYGGQRPP----TAQW 164 (337)
T ss_pred C--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhhccCc------h-----hccccCCC----cceE
Confidence 6 9999999999999999999999999999999999998633222111000 0 01122222 2344
Q ss_pred ccceeeeEeeCChhhHHhcCCeee------EEEEEEEeecCCCCCCCCCCCc----HHHHHHHHHHHHHcCCCCCCccee
Q 018076 289 IGEGSGVLVLEELEHAKKRGAKIY------AEVRGYGMSGDAHHITQPHIDG----KGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 289 ~gEGAaalvL~~~~~A~~~g~~~~------a~i~g~~~~~d~~~~~~p~~~g----~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
.+.||+++||.+. +..++ +.|..++ +..|...| .+....|.+=|++.|.+|+|.|+|
T Consensus 165 tvtGAGA~i~~~~------~~~~~i~~~t~Gkv~D~g-------~~d~~nmgaaMapAa~dti~~h~~d~~~~~~~yDli 231 (337)
T PRK08304 165 TVTGAGAVLLSRE------GSGPRITHATIGKVVDLG-------IKDPNDMGAAMAPAAADTIQQHFKDTGRSPEDYDLI 231 (337)
T ss_pred EeeccEEEEEecC------CCCceEEEEeEEEEEecC-------CCCcccchhhhhHHHHHHHHHHHHHcCCChhhccEE
Confidence 6789999999864 22232 2333333 33333223 344677899999999999999987
|
|
| >TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.4e-10 Score=107.85 Aligned_cols=165 Identities=15% Similarity=0.089 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|++.|+++||+++ ++++++ .+++++..+.. .....+..|...||+
T Consensus 50 ~~la~~Aa~~aL~~a--~~~~Id-----~li~~t~s~~~--------------------------~~~s~a~~v~~~Lgl 96 (379)
T TIGR01835 50 VTMAASAAKPILDRN--DKQKID-----MVIFGTESGID--------------------------QSKAAAVYVHGLLGL 96 (379)
T ss_pred HHHHHHHHHHHHHhC--CHhhCC-----EEEEEeCCCCC--------------------------CCCCHHHHHHHHhCC
Confidence 579999999999998 566666 78888754321 112356778889999
Q ss_pred CC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 210 QG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 210 ~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
.+ +++.+..+|++++.||..|..+|++|..+.+||+++|.. .. . + ....-.
T Consensus 97 ~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a--~~-----------~------~--------~~~~~~ 149 (379)
T TIGR01835 97 QPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDIA--KY-----------G------L--------ESPGEP 149 (379)
T ss_pred CCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehh--hc-----------c------c--------CCCCCc
Confidence 74 678899999999999999999999999999999999851 00 0 0 011224
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeec-CCCCCCC------CCCCc--------HHHHHHHHHHHHHcCCCC
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DAHHITQ------PHIDG--------KGAILAMTRALKQVVHNV 352 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~-d~~~~~~------p~~~g--------~~~~~a~~~Al~~Agl~~ 352 (361)
+.||||+|+||++.. .++....+....+ +...... |...+ +.+..++++.|+++|+++
T Consensus 150 ~~GdGA~A~Ll~~~~-------~i~~~~~~~~~~t~~~~df~~p~~~~~~~v~g~~s~~~y~~~~~~~~~~~l~~~g~~~ 222 (379)
T TIGR01835 150 TQGAGAVAMLVSADP-------KLLAINEDSVLYTDDIMDFWRPNYSTTALVDGQYSNEQYLNAFENAWNDYAKRTGLSL 222 (379)
T ss_pred cccCccEEEEEecCC-------CeeEEeccceeeecCCCCccCCCCCCceeECcHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 589999999998642 2221111111111 2111111 11122 244578899999999999
Q ss_pred CCcceeecC
Q 018076 353 DGFEQLSIQ 361 (361)
Q Consensus 353 ~dId~ie~~ 361 (361)
+|||++=+|
T Consensus 223 ~did~~i~H 231 (379)
T TIGR01835 223 ADFAAFCFH 231 (379)
T ss_pred HHcCEEEEC
Confidence 999987544
|
This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event. |
| >PRK12404 stage V sporulation protein AD; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=7.4e-10 Score=100.88 Aligned_cols=166 Identities=16% Similarity=0.202 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+.+||++||+++++++ .+++|+..+. ..+++.++..+|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID-----~i~vGdL~nQ-----------------------------~ipssfvar~LG 99 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQ-----FFLAGDLMNQ-----------------------------ITPTSFAARTLG 99 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC-----------------------------cCcHHHHHHHhC
Confidence 347999999999999999998887 8888873310 123346777788
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCccc
Q 018076 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288 (361)
Q Consensus 209 l~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v 288 (361)
+ |.+-|.++|+++..||.+|..+|++|.+|.|||+....+.+..--+.|.. .-+.-||....-
T Consensus 100 I--P~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~aErqfR~P~-----------eyG~Qrp~taqw---- 162 (334)
T PRK12404 100 I--PYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAVEKQFRYPT-----------EYGGQKPPTAQW---- 162 (334)
T ss_pred C--CccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchhhhhccCcc-----------cccCcCCCcccE----
Confidence 5 78999999999999999999999999999999999876433332111110 113344433222
Q ss_pred ccceeeeEeeCChhhHHhcCCeee------EEEEEEEeecCCCCCCCCCCCc----HHHHHHHHHHHHHcCCCCCCccee
Q 018076 289 IGEGSGVLVLEELEHAKKRGAKIY------AEVRGYGMSGDAHHITQPHIDG----KGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 289 ~gEGAaalvL~~~~~A~~~g~~~~------a~i~g~~~~~d~~~~~~p~~~g----~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
.-=|++++||.+. |..|+ +.|..++ +..|...| .+....|.+=|++.|.+|+|.|.|
T Consensus 163 TvTgaga~~l~~~------~~~~~i~~~T~Gkv~D~g-------~~d~~nMGaaMAPAA~dti~~h~~d~~~~~~~yDlI 229 (334)
T PRK12404 163 TVTGAGAAILSKT------GDGPRVTSATIGRVVDMG-------LTDPFNMGGAMAPAAVDTIEAHLRDRQIDASYYDLI 229 (334)
T ss_pred EEEceEEEEEecC------CCCceEEEEEEEEEEecC-------CCCcccchhhhhHHHHHHHHHHHHHhCCChhhccEE
Confidence 2237888888764 22232 2333333 33333333 344677899999999999999987
|
|
| >PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.3e-10 Score=98.42 Aligned_cols=125 Identities=21% Similarity=0.266 Sum_probs=111.0
Q ss_pred CCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhh
Q 018076 116 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (361)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (361)
.+|++.+.|||.+..||++.++.+++.+. .+.+ .+|+++..|+.....+....+.+.+ .++|..|..++
T Consensus 21 ~~lp~m~rRRls~~~rla~~~a~~~~~~~----~~~d-----~~VfaS~~Gel~~t~~ll~~l~~~~--~lSPT~Fs~SV 89 (218)
T PF13723_consen 21 AFLPPMQRRRLSRLSRLALEAALECLAED----EQPD-----AIVFASRHGELERTFKLLEALAEEE--ELSPTAFSQSV 89 (218)
T ss_pred ccCCHHHHcccCHHHHHHHHHHHHHHhcc----CCCC-----cEEEEeCCCcHHHHHHHHHHHHhCC--CcCccchhhhh
Confidence 35899999999999999999999998652 1111 7899999999999999999988754 59999999999
Q ss_pred hhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC
Q 018076 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID 252 (361)
Q Consensus 196 ~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~ 252 (361)
+|++++++++..+.++++.++..+-.+...||..|+.+|..| .+.||++..|..+.
T Consensus 90 HNA~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p 145 (218)
T PF13723_consen 90 HNAAAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP 145 (218)
T ss_pred hhHHHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence 999999999999999999999999999999999999999999 88889999888443
|
|
| >PLN03168 chalcone synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=2.5e-10 Score=109.60 Aligned_cols=125 Identities=19% Similarity=0.200 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
-...|+.+|+++||+++|+++++|+ .||++|+.+ + .+ ...+.+|+..|
T Consensus 100 ~a~~La~~Aa~~AL~~ag~~~~dId-----~lI~~T~Tg----------------------~----~~-Ps~a~~l~~~L 147 (389)
T PLN03168 100 QVPKLAAEAAQKAIKEWGGRKSDIT-----HIVFATTSG----------------------V----NM-PGADHALAKLL 147 (389)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCC----------------------C----CC-ccHHHHHHHHh
Confidence 3456999999999999999998887 888888543 1 12 23567899999
Q ss_pred CCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|++.. ++.+..||++++.+|..|..+|++|....|||+++|.+ +. . |.. ++. ...+..-
T Consensus 148 Gl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~-S~-~---~~~-----------~~~--~~~~~~~ 209 (389)
T PLN03168 148 GLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVT-AV-T---YRA-----------PSE--NHLDGLV 209 (389)
T ss_pred CcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehh-hh-h---ccC-----------ccc--ccHHHHh
Confidence 99763 58899999999999999999999999999999999962 21 1 000 000 0011112
Q ss_pred CcccccceeeeEeeCChh
Q 018076 285 DGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 285 ~G~v~gEGAaalvL~~~~ 302 (361)
...++||||+|+||+..+
T Consensus 210 ~~~LFGDGAaAvvl~~~~ 227 (389)
T PLN03168 210 GSALFGDGAGVYVVGSDP 227 (389)
T ss_pred ccccccCccEEEEEecCC
Confidence 467899999999999743
|
|
| >PLN02577 hydroxymethylglutaryl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.15 E-value=9.1e-10 Score=106.89 Aligned_cols=90 Identities=12% Similarity=0.125 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHH---H
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS---M 205 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is---~ 205 (361)
...|++.|++.||+++|+++++|+ -|++||..+.. . ....+..|. .
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~Id-----llivaTeT~~d-------------------------~-~ps~A~~v~~ll~ 101 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIG-----RLEVGSETVID-------------------------K-SKSIKTFLMQLFE 101 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC-------------------------C-CCchHHHHHHHHH
Confidence 457999999999999999988887 88999865321 0 112233343 4
Q ss_pred HcCCCC-CccccccchhhHHHHHHHHHHHHHcCCC--CEEEEeecCC
Q 018076 206 KYGFQG-PNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTES 249 (361)
Q Consensus 206 ~lgl~G-~~~~v~~acasgl~Al~~A~~~I~~G~~--d~~lvgg~d~ 249 (361)
.+|.+. .++.+..+|.++..||..|..+|++|.. +.+||+|+|.
T Consensus 102 ~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~ 148 (459)
T PLN02577 102 ESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADS 148 (459)
T ss_pred HhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEech
Confidence 456644 6788999999999999999999999985 8999999996
|
|
| >PLN02854 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.2e-09 Score=102.60 Aligned_cols=120 Identities=16% Similarity=0.117 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
.....+..++.++|+++|+++++++ .+|+.++ +. .....++..|...+
T Consensus 187 ea~~v~~~~~~~lL~kaGi~p~dID-----~LIv~cS-~~--------------------------~p~PSlAa~I~n~L 234 (521)
T PLN02854 187 EAEAVMFGALDSLFSKTGVKPRDIG-----ILIVNCS-LF--------------------------NPTPSLSAMIVNHY 234 (521)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECC-CC--------------------------CCCCCHHHHHHHHh
Confidence 3445777889999999999988876 6666542 11 11234567889999
Q ss_pred CCC-C-Cccccc-cchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQ-G-PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~-G-~~~~v~-~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|++ . .++.++ .||++++.+|..|.++|+.|....+||+++|.. + ..+ + +-+...
T Consensus 235 Glr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~-S-~~~--y-------------------~g~Drs 291 (521)
T PLN02854 235 KLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENI-T-LNW--Y-------------------FGNDRS 291 (521)
T ss_pred CCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeee-e-cCC--C-------------------CCCchh
Confidence 997 3 578888 799999999999999999999999999999972 2 100 0 001112
Q ss_pred C---cccccceeeeEeeCChh
Q 018076 285 D---GFVIGEGSGVLVLEELE 302 (361)
Q Consensus 285 ~---G~v~gEGAaalvL~~~~ 302 (361)
. .+++||||+|+||++.+
T Consensus 292 ~lv~~~LFgDGAAAvlLs~~~ 312 (521)
T PLN02854 292 MLLCNCIFRMGGAAVLLSNKA 312 (521)
T ss_pred hhcceeeeccceeEEEEeccc
Confidence 2 46789999999998743
|
|
| >COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=4e-08 Score=91.53 Aligned_cols=168 Identities=23% Similarity=0.288 Sum_probs=118.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..-|+++|++++|..+++++..+. .|++||.++.... =..++.|+..||
T Consensus 51 ~vTmaveAA~~~l~r~~~D~~~Ig-----~v~vgTES~~d~~--------------------------K~~at~v~~~lg 99 (377)
T COG3425 51 AVTMAVEAARNALKRADIDPSKIG-----AVIVGSESGPDAV--------------------------KPTATIVAEALG 99 (377)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCc-----eEEEecCCCcccc--------------------------cchHHHHHHHhC
Confidence 456999999999999999876665 7889985532210 124567888899
Q ss_pred CCCC--ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQGP--NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G~--~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
+.-- ++-+..+|-+|..||.+|..+|.+|..+.+||+|.|..... |... --
T Consensus 100 ~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~~-------------------~~~~--------~E 152 (377)
T COG3425 100 LNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQYA-------------------PGDA--------LE 152 (377)
T ss_pred CCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhccC-------------------CCcc--------cC
Confidence 8653 34477899999999999999999999999999999961110 1111 12
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEEee-cCCCCCCC------CCCCc--------HHHHHHHHHHHHHcCCC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS-GDAHHITQ------PHIDG--------KGAILAMTRALKQVVHN 351 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~-~d~~~~~~------p~~~g--------~~~~~a~~~Al~~Agl~ 351 (361)
+.-|.||+|+|++.. ..+.+++.+.+.. .|-..... |...+ ..+..+.+..+++.|++
T Consensus 153 ~t~GAGavA~lIg~n-------~~~~a~~~~~~syt~d~~DFwRp~~~~yp~~dg~~s~~~Y~~~~~~a~~~~~~k~gls 225 (377)
T COG3425 153 YTAGAGAVAFLIGKN-------PPIVAEFEGTGSYTTDTPDFWRPDGQPYPYVDGRFSEPAYFKHVENAAKGYMEKTGLS 225 (377)
T ss_pred ccCCCceEEEEEccC-------CCeEEEecCceEEecCCCcccccCCCcccccCceecHHHHHHHHHHHHHHHHHHhCCC
Confidence 335789999999862 3445566555543 33322222 22222 46678889999999999
Q ss_pred CCCcceeecC
Q 018076 352 VDGFEQLSIQ 361 (361)
Q Consensus 352 ~~dId~ie~~ 361 (361)
|+|+||+=+|
T Consensus 226 ~~dfdy~vfH 235 (377)
T COG3425 226 PDDFDYIVFH 235 (377)
T ss_pred hhhhCeEEec
Confidence 9999998654
|
|
| >KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.6e-10 Score=98.16 Aligned_cols=196 Identities=19% Similarity=0.246 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
+.++.++....|+...++.+.++ -+++|+-. + ..--+..+...+-.-|+
T Consensus 67 hdlar~al~~ll~kt~lpke~~d-----yii~gtvi------q--------------------evktsniareaal~agf 115 (465)
T KOG1392|consen 67 HDLAREALKALLEKTKLPKEQLD-----YIICGTVI------Q--------------------EVKTSNIAREAALLAGF 115 (465)
T ss_pred hHHHHHHHHHHHHhccCCHHHhc-----eeeehhhH------H--------------------HHhcchHHHHHHHhcCC
Confidence 45677778888898888877766 77887621 1 11112223333333344
Q ss_pred --CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHH---------hh-------ccccccc---
Q 018076 210 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGF---------CK-------SRALTTK--- 268 (361)
Q Consensus 210 --~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~---------~~-------~~~ls~~--- 268 (361)
+-|..+|.-+|-|+.+|+..++-+|..|.||+++.||+|...+......- .+ +...++.
T Consensus 116 sdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsdvpirhsrkmrklml~~nkak~~gqrl~l~s~fr~n 195 (465)
T KOG1392|consen 116 SDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSDVPIRHSRKMRKLMLGMNKAKDVGQRLKLGSQFRKN 195 (465)
T ss_pred CCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeecccCchhhhHHHHHHhhccccccchhhhhhHHhhhhhh
Confidence 56999999999999999999999999999999999999963332211110 00 0000000
Q ss_pred ----------------------------CC------C------------------------------C----CC------
Q 018076 269 ----------------------------YN------G------------------------------T----PQ------ 274 (361)
Q Consensus 269 ----------------------------~~------~------------------------------~----~~------ 274 (361)
.+ + + .+
T Consensus 196 flapelpavaefstgetmghsadrlaaafnvsr~eqdeyalrshtlakeaq~~g~ftdvvpfkv~gkd~~t~kdngirvs 275 (465)
T KOG1392|consen 196 FLAPELPAVAEFSTGETMGHSADRLAAAFNVSRREQDEYALRSHTLAKEAQKNGKFTDVVPFKVDGKDPKTIKDNGIRVS 275 (465)
T ss_pred ccCcCcchheeccccccccccHHHHHHHhccchhhhhHHHHhhhHHHHHHHhcCcccceeeEecCCCCcceecCCCcccC
Confidence 00 0 0 00
Q ss_pred ----------CCCcCCCC--CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEe-ecCCCCCCCCCCCcHHHHHHH
Q 018076 275 ----------EASRPFDC--GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM-SGDAHHITQPHIDGKGAILAM 341 (361)
Q Consensus 275 ----------~~~~pfd~--~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~-~~d~~~~~~p~~~g~~~~~a~ 341 (361)
...+||.. .++.-.+.|||.+.++..+|.|.+.|-++.++++.+-. ++|...... .+....+
T Consensus 276 sle~laklkpafvkpygtvtaanasfltdgasa~limteekala~gykpkaylrdflyvsqdpkdqll-----lgpay~i 350 (465)
T KOG1392|consen 276 SLEKLAKLKPAFVKPYGTVTAANASFLTDGASAALIMTEEKALANGYKPKAYLRDFLYVSQDPKDQLL-----LGPAYVI 350 (465)
T ss_pred CHHHHhhcCchhccCcceeEecccchhcCcchhhhhhhHHHHHHcCCCchHHhhhheeeccCchhhee-----ccccccc
Confidence 01122221 13333478999999999999999999999999998855 444332111 1226789
Q ss_pred HHHHHHcCCCCCCcceeecC
Q 018076 342 TRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 342 ~~Al~~Agl~~~dId~ie~~ 361 (361)
.+.|+.|||+..|||.+|||
T Consensus 351 pkll~kagltlkdid~feih 370 (465)
T KOG1392|consen 351 PKLLDKAGLTLKDIDVFEIH 370 (465)
T ss_pred HHHHHHcCCcccccchhhhH
Confidence 99999999999999999997
|
|
| >PLN02192 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.8e-08 Score=98.69 Aligned_cols=118 Identities=19% Similarity=0.185 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
....++..|+++||+++|+++++++ -+|+.++.. .....++..|...+
T Consensus 175 Ea~~~~~~Aa~~aL~kaGi~p~DID-----iLIv~~S~~---------------------------~~~PSlaa~I~n~l 222 (511)
T PLN02192 175 EAETVMFGAIDQLLAKTSVKPKDIG-----ILIVNCSLF---------------------------NPTPSLSAMVINHY 222 (511)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCC---------------------------CCCchHHHHHHHHh
Confidence 3457888999999999999988876 666665321 11245667889999
Q ss_pred CCCC--Cccccc-cchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~G--~~~~v~-~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|++. .++.++ .||++++.||..|.++|+.+....+||+++|. ++ ..+. ++.++
T Consensus 223 Glr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~-~S-~n~y----------------------~g~dr 278 (511)
T PLN02192 223 KLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMEN-IT-LNWY----------------------FGNDR 278 (511)
T ss_pred CCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEe-cc-ccCC----------------------CCCCH
Confidence 9974 789999 59999999999999999999999999999997 22 1100 00111
Q ss_pred -Cc---ccccceeeeEeeCCh
Q 018076 285 -DG---FVIGEGSGVLVLEEL 301 (361)
Q Consensus 285 -~G---~v~gEGAaalvL~~~ 301 (361)
.- .++||||||+||+..
T Consensus 279 s~lv~n~LFgDGAaAvLLs~~ 299 (511)
T PLN02192 279 SMLVSNCLFRMGGAAILLSNK 299 (511)
T ss_pred HHHhccccccccceEEEEecc
Confidence 11 468999999999874
|
|
| >PLN02932 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.90 E-value=9.5e-09 Score=100.11 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=93.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
+....++..|+++||+++|+++++++ .+|+.++.+. .....+..|...
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p~dId-----~lIv~tst~~---------------------------~~Pslaa~V~~~ 193 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISPSDIG-----ILVVNSSTFN---------------------------PTPSLSSILVNK 193 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCC---------------------------CCCcHHHHHHHH
Confidence 34557999999999999999988887 7888875431 123456789999
Q ss_pred cCCC-C-Cccccc-cchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCC
Q 018076 207 YGFQ-G-PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (361)
Q Consensus 207 lgl~-G-~~~~v~-~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 283 (361)
+|++ . .++.++ .||++++.+|..|.++|+.|....+||+++|. ++.... +... + +..
T Consensus 194 lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~-~S~~~~----------------~~d~-r--~~l 253 (478)
T PLN02932 194 FKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTEN-ITQNLY----------------LGNN-K--SML 253 (478)
T ss_pred hCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEee-cccccC----------------CCcc-h--hhh
Confidence 9996 3 688898 79999999999999999999999999999997 222210 0000 0 001
Q ss_pred CCcccccceeeeEeeCChh
Q 018076 284 RDGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 284 ~~G~v~gEGAaalvL~~~~ 302 (361)
-...++||||+|+||+..+
T Consensus 254 ~t~~LFgDGAAAvlLs~~~ 272 (478)
T PLN02932 254 VTNCLFRIGGAAILLSNRS 272 (478)
T ss_pred ccceeecccceEEEEeccc
Confidence 2357789999999999754
|
|
| >PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.6e-09 Score=95.17 Aligned_cols=90 Identities=29% Similarity=0.325 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.++++++|+++++++++++ .|++|+..... ....++..++...|
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id-----~v~~G~~~~~~--------------------------~g~~~ar~~~l~aG 74 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDID-----AVIVGNVLQEG--------------------------EGQNIARQAALAAG 74 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEE-----EEEEE-SSSCT--------------------------TTCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhcccchhhhh-----hcCcccccccc--------------------------cchhhhhhhhhhcc
Confidence 467899999999999999988887 89999854311 12234445566667
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCC
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES 249 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~ 249 (361)
+ +-|.++|+.+|+||+.||..|+..|++|.+|++|+||+|.
T Consensus 75 l~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~ 117 (264)
T PF00108_consen 75 LPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVES 117 (264)
T ss_dssp S-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEE
T ss_pred cccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccc
Confidence 6 3489999999999999999999999999999999999997
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B .... |
| >PLN02377 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.82 E-value=3.7e-08 Score=96.57 Aligned_cols=119 Identities=18% Similarity=0.173 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
.....++..|+.+||+++|+++++++ .+++ +..+. .....++..|...
T Consensus 170 ~ea~~l~~~A~~~aL~kaGi~p~dID-----~LVv-~cS~~--------------------------~~~PSlaa~V~~~ 217 (502)
T PLN02377 170 EEAEQVMFGALDNLFANTNVNPKDIG-----ILVV-NCSLF--------------------------NPTPSLSAMIVNK 217 (502)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEE-ECCCC--------------------------CCCCcHHHHHHHH
Confidence 34567999999999999999988776 6665 42211 1123456789999
Q ss_pred cCCCC--Cccccc-cchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCC
Q 018076 207 YGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (361)
Q Consensus 207 lgl~G--~~~~v~-~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 283 (361)
||++. .++.++ .||++++.+|..|.++|+.|....+||+++|. ++... -++.+
T Consensus 218 LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~-~S~~~-----------------------~~~d~ 273 (502)
T PLN02377 218 YKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTEN-ITQNW-----------------------YFGNK 273 (502)
T ss_pred hCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEec-ccccc-----------------------CCCCC
Confidence 99974 688899 59999999999999999999999999999996 22110 01112
Q ss_pred CC----cccccceeeeEeeCCh
Q 018076 284 RD----GFVIGEGSGVLVLEEL 301 (361)
Q Consensus 284 ~~----G~v~gEGAaalvL~~~ 301 (361)
+. ..++||||+|+||+..
T Consensus 274 ~s~lv~n~LFgDGAaAvlLs~~ 295 (502)
T PLN02377 274 KSMLIPNCLFRVGGSAVLLSNK 295 (502)
T ss_pred ccccccceeeccccEEEEEecc
Confidence 22 3678999999999874
|
|
| >TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.1e-07 Score=86.78 Aligned_cols=90 Identities=10% Similarity=0.064 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc-
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY- 207 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l- 207 (361)
...|++.|+..+|+++++++++|+ -|++||..+... ....+..|...|
T Consensus 50 ~~tma~~AA~~lL~~a~id~~~Id-----~Liv~TeS~~d~--------------------------sps~a~~v~~lL~ 98 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNIDYNQIG-----RLEVGTETIIDK--------------------------SKSVKTVLMQLFE 98 (454)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECCCCCCC--------------------------CCchHHHHHHHHH
Confidence 467999999999999999888777 888888543211 112344555544
Q ss_pred --CCCC-CccccccchhhHHHHHHHHHHHHHcCCC--CEEEEeecCC
Q 018076 208 --GFQG-PNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTES 249 (361)
Q Consensus 208 --gl~G-~~~~v~~acasgl~Al~~A~~~I~~G~~--d~~lvgg~d~ 249 (361)
|++. .++.+..+|+++..||..|..+|++|.. +.+||+++|.
T Consensus 99 ~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi 145 (454)
T TIGR01833 99 ESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI 145 (454)
T ss_pred hcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence 4433 5788999999999999999999999975 8999999996
|
Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes. |
| >PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.8e-07 Score=84.57 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=90.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
+....++..++.++|+++|+.+++++ .+|+.++.+.. ...++..|...
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dId-----iLVvncs~f~p---------------------------tPSLsamIvnr 128 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDID-----ILVVNCSLFNP---------------------------TPSLSAMIVNR 128 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEECcCCCc---------------------------CCcHHHHHHHH
Confidence 33456778899999999999988887 77777754321 13456778889
Q ss_pred cCCCCCc--ccccc-chhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCC
Q 018076 207 YGFQGPN--HAAVT-ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (361)
Q Consensus 207 lgl~G~~--~~v~~-acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 283 (361)
||++.-. +.+.+ ||++|+.+|.+|.++|+...-..+||+.+|. +++..+.+-.+...++
T Consensus 129 ~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~-~s~~~Y~G~~rsmlv~----------------- 190 (290)
T PF08392_consen 129 YGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTEN-ISANWYRGNDRSMLVS----------------- 190 (290)
T ss_pred hCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEee-cccccccCCcHHHhhc-----------------
Confidence 9998644 44444 8999999999999999999988999999997 3332222111111111
Q ss_pred CCcccccceeeeEeeCChhh
Q 018076 284 RDGFVIGEGSGVLVLEELEH 303 (361)
Q Consensus 284 ~~G~v~gEGAaalvL~~~~~ 303 (361)
..++.+|++|++|.+...
T Consensus 191 --NcLFr~GgAAvLLSn~~~ 208 (290)
T PF08392_consen 191 --NCLFRMGGAAVLLSNKPS 208 (290)
T ss_pred --cccccCCceeEEeecCcc
Confidence 356789999999988765
|
The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane |
| >COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=98.74 E-value=5.8e-09 Score=100.33 Aligned_cols=54 Identities=31% Similarity=0.522 Sum_probs=48.2
Q ss_pred HHHHHHHHHcCCCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCC
Q 018076 198 MASGHVSMKYGFQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSI 251 (361)
Q Consensus 198 ~~a~~is~~lgl~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~ 251 (361)
.++..++...|+.. |.++|+.+|+||+.|+..|++.|++|.+|++|++|+|...
T Consensus 68 ~~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS 123 (392)
T COG0183 68 NIARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMS 123 (392)
T ss_pred cHHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeecc
Confidence 45556788888876 9999999999999999999999999999999999998733
|
|
| >COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=98.49 E-value=9.7e-07 Score=79.26 Aligned_cols=178 Identities=15% Similarity=0.192 Sum_probs=118.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
.....+.+++.++||+.+++.+++++ .|++.++.|-. ...+-.+|...
T Consensus 74 e~a~~l~v~a~r~aL~~~~l~pedId-----~vv~vtsTG~~---------------------------~Ps~dari~~~ 121 (356)
T COG3424 74 EEAVPLGVDALRRALDGSPLRPEDID-----AVVTVTSTGLA---------------------------TPSLDARIVGE 121 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCCHHHCc-----EEEEEeecccc---------------------------CCChhHHHHhh
Confidence 34557899999999999999988887 77777755421 11223356667
Q ss_pred cCCCCCc--c-ccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCC
Q 018076 207 YGFQGPN--H-AAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (361)
Q Consensus 207 lgl~G~~--~-~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 283 (361)
|||.-.. + .-.-||++|..+|..|.+.++......+||+++|. +..++. +.|..
T Consensus 122 Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vEL--CSLt~~---------------------~~d~t 178 (356)
T COG3424 122 LGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVEL--CSLTYV---------------------FADDT 178 (356)
T ss_pred cCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeee--eeeeee---------------------cCCCC
Confidence 7775322 1 23459999999999999999999999999999995 322211 01111
Q ss_pred CCcc----cccceeeeEeeCChhhHHhcCCeeeE---------------EEEEEEeecCCCCCC----CCCCCcHHHHHH
Q 018076 284 RDGF----VIGEGSGVLVLEELEHAKKRGAKIYA---------------EVRGYGMSGDAHHIT----QPHIDGKGAILA 340 (361)
Q Consensus 284 ~~G~----v~gEGAaalvL~~~~~A~~~g~~~~a---------------~i~g~~~~~d~~~~~----~p~~~g~~~~~a 340 (361)
...+ ++|||++|+|+.-...+. +..+.. .+-||.+.+.|.+.. .|..-.+.+...
T Consensus 179 ~s~lVgtaLF~DG~AA~vv~gd~~~~--~~~~~~p~i~~s~StL~~dse~~Mgwdv~d~G~~~vlSrdlp~lIe~~l~~~ 256 (356)
T COG3424 179 KSNLVGTALFGDGAAAVVVSGDRRAE--GKRPLRPDILDSFSTLYPDSEDIMGWDVGDQGLKVVLSRDLPNLIESYLAPN 256 (356)
T ss_pred cccceeeeeecCCeeEEEEecccccc--ccCCCCceecccccccCCccccccceeecCCcEEEEEcCchhHHHHHHhhhh
Confidence 1133 389999999998643322 222211 134566666665422 122224566778
Q ss_pred HHHHHHHcCCCCCCcceeecC
Q 018076 341 MTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 341 ~~~Al~~Agl~~~dId~ie~~ 361 (361)
+...|..-|++.+||+.+=+|
T Consensus 257 V~~fL~~~~ls~~dI~~w~~H 277 (356)
T COG3424 257 VTTFLATHGLSIEDIEAWVVH 277 (356)
T ss_pred HHHHHHHcCCchhhhceeeeC
Confidence 999999999999999987654
|
|
| >PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.8e-07 Score=74.69 Aligned_cols=50 Identities=24% Similarity=0.423 Sum_probs=43.2
Q ss_pred eEEEEEEEeecCC-CCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 312 YAEVRGYGMSGDA-HHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 312 ~a~i~g~~~~~d~-~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
||+|+|+++++|+ .+.+.+.|++.++.++|++||+++||+|+||||||.|
T Consensus 1 ya~i~g~~~~~dg~~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~h 51 (119)
T PF02801_consen 1 YAVIRGYGVNSDGARSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAH 51 (119)
T ss_dssp SEEEEEEEEEE-SSSTSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE--
T ss_pred CEEEEEEEEECCCCCCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeee
Confidence 6899999999998 7788888889999999999999999999999999975
|
3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A .... |
| >PLN00415 3-ketoacyl-CoA synthase | Back alignment and domain information |
|---|
Probab=98.43 E-value=7.5e-07 Score=86.10 Aligned_cols=120 Identities=13% Similarity=0.102 Sum_probs=82.8
Q ss_pred HHHHHHH-HHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 129 FIAYALC-AADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 129 ~~~l~l~-a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
...|++. |+.+||+++|+++++++ .+++.+ .+. ......+..+...+
T Consensus 133 e~em~i~~A~~~aL~~aGi~p~dID-----~LIvs~-T~~--------------------------~~~Pslaa~l~~~L 180 (466)
T PLN00415 133 ESELVIFGALNSLFKKTGIEPREVG-----IFIVNC-SLF--------------------------NPNPSLSSMIVNRY 180 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEC-cCC--------------------------CCCchHHHHHHHHh
Confidence 3445554 77788899999988775 555543 211 01134556788889
Q ss_pred CCCC--Ccccccc-chhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQG--PNHAAVT-ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~G--~~~~v~~-acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|++. ..+.++. ||++++.+|..|.++++++....+||+++|. .+...+. +-|...
T Consensus 181 GLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~-~S~~~~~---------------------~~dr~~ 238 (466)
T PLN00415 181 KLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTEN-MTLSMYR---------------------GNDRSM 238 (466)
T ss_pred CCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEec-ccccccC---------------------CCcHhH
Confidence 9972 4677887 9999999999999999999999999999997 2211100 001000
Q ss_pred --CcccccceeeeEeeCChh
Q 018076 285 --DGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 285 --~G~v~gEGAaalvL~~~~ 302 (361)
...++||||+|+||+...
T Consensus 239 lv~n~LFgDGAAAvlLs~~~ 258 (466)
T PLN00415 239 LVPNCLFRVGGAAVMLSNRS 258 (466)
T ss_pred hccceeecccceEEEEecCc
Confidence 135689999999999754
|
|
| >PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways | Back alignment and domain information |
|---|
Probab=98.42 E-value=9.5e-08 Score=70.58 Aligned_cols=64 Identities=20% Similarity=0.274 Sum_probs=47.0
Q ss_pred cccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCccccccee
Q 018076 214 HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGS 293 (361)
Q Consensus 214 ~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v~gEGA 293 (361)
|.|..+|++++.||..|..+|++|.++.+||++.|.. .... . +......+++||||
T Consensus 1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~-s~~~----------------------~-~~~~~~~~~~gDgA 56 (80)
T PF08545_consen 1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRL-SRIV----------------------D-RTDRQTAFIFGDGA 56 (80)
T ss_dssp EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEG-GGGS----------------------H-TTHHHHHTTB-EEE
T ss_pred CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccc-cccc----------------------c-ccccCcceeecchh
Confidence 3578899999999999999999999999999999962 2110 0 00122356799999
Q ss_pred eeEeeCCh
Q 018076 294 GVLVLEEL 301 (361)
Q Consensus 294 aalvL~~~ 301 (361)
+++||++.
T Consensus 57 aA~vl~~~ 64 (80)
T PF08545_consen 57 AAVVLSRD 64 (80)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEec
Confidence 99999986
|
The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. |
| >PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 | Back alignment and domain information |
|---|
Probab=98.27 E-value=2.3e-06 Score=75.25 Aligned_cols=90 Identities=19% Similarity=0.116 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
-...|+.+|+.+||+++|+++.+|. .+|+-|+.|- ....+-.++...|
T Consensus 99 ~a~~L~~~Aa~~AL~~~g~~~~dIt-----hlv~vs~TG~---------------------------~~PglD~~l~~~L 146 (226)
T PF00195_consen 99 EAPPLAEEAARKALAEAGLDPSDIT-----HLVTVSCTGI---------------------------AAPGLDARLINRL 146 (226)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGEC-----EEEEEESSSS---------------------------ECS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccc-----eEEEEecCCc---------------------------CCCchhHHHHhcC
Confidence 3456899999999999999887766 7777775542 1223344678888
Q ss_pred CCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCC
Q 018076 208 GFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES 249 (361)
Q Consensus 208 gl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~ 249 (361)
||+.. .....-||.+|..+|..|.+..++..-..|||+.+|.
T Consensus 147 gL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vEl 191 (226)
T PF00195_consen 147 GLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVEL 191 (226)
T ss_dssp T--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEE
T ss_pred CCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEe
Confidence 88643 2345669999999999999999999999999999995
|
3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A .... |
| >PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.5e-05 Score=68.37 Aligned_cols=170 Identities=19% Similarity=0.168 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|..+|+..||+.+++..++++ ++++... .+. ...++..++.|+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId------~~~aGDL--------------------------lnQ--~i~s~f~ar~l~ 96 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDID------YLFAGDL--------------------------LNQ--IISSSFAARDLG 96 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-S------EEEEEET--------------------------TCC--CCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCe------EEEehhh--------------------------hhh--hHHHHHHHHhcC
Confidence 357888999999999999877664 4555421 111 133445666676
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCccc
Q 018076 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288 (361)
Q Consensus 209 l~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v 288 (361)
+ |-+-+.++||+...+|.+|..+|..|-+|.+|++....+.+..--+.|.. .-+.-||-.. ..
T Consensus 97 i--Pf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tAERQfR~P~-----------EyG~Qrp~tA----qw 159 (329)
T PF07451_consen 97 I--PFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATAERQFRFPT-----------EYGGQRPPTA----QW 159 (329)
T ss_dssp ----EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHHHHHT---G-----------GGT----TT------E
T ss_pred C--CccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchhhhhccCch-----------hccCCCCCcc----cE
Confidence 6 88889999999999999999999999999999998876443332222211 0022233221 12
Q ss_pred ccceeeeEeeCChhhHHhcCCeeeEEEEEEEe--ecCCCCCCCCCCCcH----HHHHHHHHHHHHcCCCCCCccee
Q 018076 289 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHHITQPHIDGK----GAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 289 ~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~--~~d~~~~~~p~~~g~----~~~~a~~~Al~~Agl~~~dId~i 358 (361)
.-=||+++||.+.. ..|+ |.+.-. .-| +.+..|...|. +....|.+=|++.|.+|+|.|.|
T Consensus 160 TVTGaGa~il~~~~------~~p~--It~~T~GkVvD-~G~~D~~nMGaAMAPAA~dTI~~h~~D~g~~p~dYDlI 226 (329)
T PF07451_consen 160 TVTGAGAAILSKEG------SGPR--ITHATIGKVVD-MGIKDPNNMGAAMAPAAADTIEQHFKDTGRSPDDYDLI 226 (329)
T ss_dssp E--EEEEEEEESS--------SEE--EEEEE----B--SS---TT-HHHHHHHHHHHHHHHHHHHCT--GGG-SEE
T ss_pred EEeceEEEEEecCC------CCcE--EEEEEEEEEEE-cCCCCcccchhhHhHHHHHHHHHHHHHhCCChhhcCeE
Confidence 23488899998643 2332 333322 222 33444444343 33566888899999999999987
|
This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A. |
| >PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00028 Score=59.30 Aligned_cols=90 Identities=20% Similarity=0.262 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..-|++.|++.+|++.+++++++. -+++||-++ .+ . .=..+.++..+|+
T Consensus 53 ~vTmA~nAa~~ll~~~~id~~~Ig-----~l~vgTES~-vD---------------~----------sKs~~t~v~~ll~ 101 (174)
T PF01154_consen 53 IVTMAANAAKPLLDRYNIDPDDIG-----RLIVGTESG-VD---------------K----------SKSISTYVHQLLG 101 (174)
T ss_dssp HHHHHHHHHHTTHHHHT-HHHHEE-----EEEEE-SS--SB---------------S----------SS-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcc-----EEEEecccc-cc---------------c----------cccHHHHHHHHhC
Confidence 356899999999999877654443 467777432 11 0 0125567888899
Q ss_pred CCCC----ccccccchhhHHHHHHHHHHHHHcCCCC--EEEEeecCC
Q 018076 209 FQGP----NHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTES 249 (361)
Q Consensus 209 l~G~----~~~v~~acasgl~Al~~A~~~I~~G~~d--~~lvgg~d~ 249 (361)
+.|. ++-+-.+|-+|..||..|..+|+++..| .+||++.|.
T Consensus 102 ~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi 148 (174)
T PF01154_consen 102 LSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI 148 (174)
T ss_dssp TTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred cCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence 8553 3457889999999999999999999876 899999995
|
Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A .... |
| >PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00019 Score=57.29 Aligned_cols=47 Identities=28% Similarity=0.418 Sum_probs=34.0
Q ss_pred eeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 310 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 310 ~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+|+++|.+++.... .|...+.+...+++++|+++|++++|||++|+|
T Consensus 2 ~pla~i~~~~~~~~-----~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~ 48 (123)
T PF02803_consen 2 KPLARIVGYASAGV-----DPEDMGLGPVPAARKALERAGLTPDDIDVIEIN 48 (123)
T ss_dssp -ESEEEEEEEEEE-------GGGGGGTHHHHHHHHHHHHT--GGGESEEEE-
T ss_pred CeEEEEEEEEEEec-----CHHHhCchHHHHHHHHHHHhCCCccccchhhcc
Confidence 57899999887653 233334555899999999999999999999997
|
3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C .... |
| >KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.33 E-value=2.8 Score=39.64 Aligned_cols=112 Identities=15% Similarity=0.250 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
.-|.+.++...++.-.++...+- -+-|||..- .+... .+=..+.++|+=
T Consensus 61 ~Sl~ltvvs~Lmery~i~~~~IG-----RLEVGTETi-----iDKSK---------------------SVKt~LMqLF~~ 109 (462)
T KOG1393|consen 61 ISLSLTVVSRLMERYNIDPDSIG-----RLEVGTETI-----IDKSK---------------------SVKTVLMQLFEE 109 (462)
T ss_pred hhhhHHHHHHHHHHhCCChhhcc-----eEEecceec-----cccch---------------------HHHHHHHHHhhh
Confidence 45778888999999988876554 467787321 10000 011123334431
Q ss_pred CC----CccccccchhhHHHHHHHHHHHHHcCCCC--EEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCC
Q 018076 210 QG----PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCG 283 (361)
Q Consensus 210 ~G----~~~~v~~acasgl~Al~~A~~~I~~G~~d--~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~ 283 (361)
.| -.+...+||=+|..||..|..||++-..| .+||+..|..+ - +++.+||-.
T Consensus 110 sgNtdIEGiDttnACYGGtaALfnavnWiESssWDGr~aivV~gDIAv--------------Y------~~G~aRpTG-- 167 (462)
T KOG1393|consen 110 SGNTDIEGIDTTNACYGGTAALFNAVNWIESSSWDGRYAIVVCGDIAV--------------Y------AKGNARPTG-- 167 (462)
T ss_pred cCCCccccccccccccccHHHHHHHhhhhhhcccCCceeEEEEeeEEE--------------e------cCCCCCCCC--
Confidence 11 23456679999999999999999998877 66666666411 1 446777754
Q ss_pred CCcccccceeeeEeeCC
Q 018076 284 RDGFVIGEGSGVLVLEE 300 (361)
Q Consensus 284 ~~G~v~gEGAaalvL~~ 300 (361)
|-||.|+++..
T Consensus 168 ------GAgAVAmLIgP 178 (462)
T KOG1393|consen 168 ------GAGAVAMLIGP 178 (462)
T ss_pred ------CcceEEEEEcC
Confidence 56888899886
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 361 | ||||
| 1w0i_A | 431 | Arabidopsis Thaliana Mitochondrial Kas Length = 431 | 1e-125 | ||
| 3kzu_A | 428 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-71 | ||
| 3e60_A | 424 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 3e-68 | ||
| 2iwy_A | 438 | Human Mitochondrial Beta-ketoacyl Acp Synthase Leng | 1e-64 | ||
| 2c9h_A | 444 | Structure Of Mitochondrial Beta-Ketoacyl Synthase L | 2e-63 | ||
| 1j3n_A | 408 | Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei | 2e-61 | ||
| 4ddo_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 3e-54 | ||
| 4f32_A | 451 | Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei | 5e-53 | ||
| 2gqd_A | 437 | The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii | 2e-50 | ||
| 1b3n_A | 412 | Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta | 1e-48 | ||
| 2gfw_A | 427 | Structure Of Wild Type E. Coli Fabf (Kasii) Length | 1e-48 | ||
| 2gfy_A | 427 | Structure Of E. Coli Fabf(K335a) Mutant With Covale | 2e-48 | ||
| 1e5m_A | 416 | Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas | 1e-47 | ||
| 3hnz_A | 427 | Structure Of E. Coli Fabf(C163a) In Complex With Pl | 1e-47 | ||
| 2gfv_A | 427 | Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng | 3e-47 | ||
| 3o04_A | 413 | Crystal Structure Of The Beta-Keto-Acyl Carrier Pro | 1e-42 | ||
| 2alm_A | 431 | Crystal Structure Analysis Of A Mutant Beta-Ketoacy | 4e-42 | ||
| 1ox0_A | 430 | The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie | 5e-42 | ||
| 2rjt_A | 428 | Crystal Structure Analysis Of A Surface Entropy Red | 6e-41 | ||
| 3lrf_A | 428 | Crystal Structure Of Beta-Ketoacyl Synthase From Br | 3e-31 | ||
| 3u0f_A | 411 | The Structure Of Beta-Ketoacyl Synthase From Brucel | 4e-31 | ||
| 2wgd_A | 416 | Crystal Structure Of Kasa Of Mycobacterium Tubercul | 8e-27 | ||
| 1dd8_A | 406 | Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr | 5e-26 | ||
| 2byy_A | 418 | E. Coli Kas I H298e Mutation Length = 418 | 5e-26 | ||
| 2byz_A | 418 | Structure Of E. Coli Kas I H298q Mutant In Complex | 5e-26 | ||
| 1fj4_A | 406 | The Structure Of Beta-Ketoacyl-[acyl Carrier Protei | 5e-26 | ||
| 2byw_A | 418 | Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C | 6e-26 | ||
| 1h4f_A | 406 | E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha | 6e-26 | ||
| 2wgf_A | 416 | Crystal Structure Of Mycobacterium Tuberculosis C17 | 2e-25 | ||
| 2gp6_A | 434 | X-Ray Crystal Structure Of Mycobacterium Tuberculos | 4e-23 | ||
| 1f91_A | 406 | Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In | 2e-22 | ||
| 1ek4_A | 418 | Beta-Ketoacyl [acyl Carrier Protein] Synthase I In | 2e-22 | ||
| 2vb7_C | 406 | Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap | 2e-22 | ||
| 3oyt_A | 410 | 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo | 3e-20 | ||
| 1tqy_A | 424 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 7e-19 | ||
| 4ewg_A | 412 | Crystal Structure Of A Beta-Ketoacyl Synthase From | 1e-18 | ||
| 1tqy_B | 415 | The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le | 8e-06 | ||
| 2qo3_A | 915 | Crystal Structure Of [ks3][at3] Didomain From Modul | 1e-05 |
| >pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 | Back alignment and structure |
|
| >pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 | Back alignment and structure |
|
| >pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 | Back alignment and structure |
|
| >pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 | Back alignment and structure |
|
| >pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 | Back alignment and structure |
|
| >pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 | Back alignment and structure |
|
| >pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 | Back alignment and structure |
|
| >pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 | Back alignment and structure |
|
| >pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 | Back alignment and structure |
|
| >pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 | Back alignment and structure |
|
| >pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 | Back alignment and structure |
|
| >pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 | Back alignment and structure |
|
| >pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 | Back alignment and structure |
|
| >pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 | Back alignment and structure |
|
| >pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 | Back alignment and structure |
|
| >pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 | Back alignment and structure |
|
| >pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 | Back alignment and structure |
|
| >pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 | Back alignment and structure |
|
| >pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 | Back alignment and structure |
|
| >pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 | Back alignment and structure |
|
| >pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 | Back alignment and structure |
|
| >pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 | Back alignment and structure |
|
| >pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 | Back alignment and structure |
|
| >pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 | Back alignment and structure |
|
| >pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 | Back alignment and structure |
|
| >pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 | Back alignment and structure |
|
| >pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 | Back alignment and structure |
|
| >pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 | Back alignment and structure |
|
| >pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 | Back alignment and structure |
|
| >pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 | Back alignment and structure |
|
| >pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 | Back alignment and structure |
|
| >pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 | Back alignment and structure |
|
| >pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 | Back alignment and structure |
|
| >pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 | Back alignment and structure |
|
| >pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 | Back alignment and structure |
|
| >pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 | Back alignment and structure |
|
| >pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 | Back alignment and structure |
|---|
Score = 486 bits (1253), Expect = e-172
Identities = 242/309 (78%), Positives = 276/309 (89%), Gaps = 3/309 (0%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+GMVTPLG G ETTWRRLI GECGIR +T +DLKM +FD ET+L+ F QL+SK
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
VAA VP G + GEF+E WL + +++A FI YA+CAADEAL DA+WLP+++ +KERTG
Sbjct: 61 VAAFVPYGSNPGEFDEALWL---NSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTG 117
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
VSIGGGIGSI D V+AAQ+ICEKRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVT
Sbjct: 118 VSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVT 177
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
ACATGAHSIGDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASR
Sbjct: 178 ACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASR 237
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
PFDC RDGFVIGEGSGV+VLEE EHAK+RGAKIYAE+ GYGMSGDAHHITQP DGKGA+
Sbjct: 238 PFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAV 297
Query: 339 LAMTRALKQ 347
LAMTRAL+Q
Sbjct: 298 LAMTRALRQ 306
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 | Back alignment and structure |
|---|
Score = 472 bits (1217), Expect = e-167
Identities = 167/317 (52%), Positives = 214/317 (67%), Gaps = 15/317 (4%)
Query: 32 PPPLSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHA 91
+RRVV+TG+G+V+PL G E TW+RL+ GE G R +T F+ +
Sbjct: 3 HHHHHHMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVT-------EFEVD----- 50
Query: 92 FGQLTSKVAAVVPCGISS-GEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSD 150
L ++A +P G + G FN D ++ K+ R + FI YA+ AAD+AL DA W P +
Sbjct: 51 --DLACQIACRIPVGDGTNGTFNPDLHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPEN 108
Query: 151 QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQ 210
+ RTGV IG GIG I V+A + +K RR+SPFFIP LIN+ASGHVS+K+ +
Sbjct: 109 DEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLR 168
Query: 211 GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYN 270
GPNH+ VTACATG H+IGDAAR+I FGD+DVMVAGGTES + +S+AGF +AL+T+ N
Sbjct: 169 GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERN 228
Query: 271 GTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQP 330
P ASRP+D RDGFV+GEG+G++VLEELEHA RGAKIYAEV GYGMSGDA HIT P
Sbjct: 229 DDPTAASRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAP 288
Query: 331 HIDGKGAILAMTRALKQ 347
G+GA M ALK+
Sbjct: 289 TESGEGAQRCMVAALKR 305
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 | Back alignment and structure |
|---|
Score = 471 bits (1215), Expect = e-166
Identities = 138/328 (42%), Positives = 195/328 (59%), Gaps = 16/328 (4%)
Query: 22 SSSSRAEVFDPPPLSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMG 81
E P S RVVVTGIG+V+PLGCG E W+RLI G G+R +
Sbjct: 7 HHMGTLEAQTQGPGSMTLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLG------- 59
Query: 82 NFDRETQLHAFGQLTSKVAAVVP--CGISSGEFNEDSWLNSKDHRSIARFIAYALCAADE 139
+ +L++KV V G F+ + + K+ R + RFI A+ AADE
Sbjct: 60 DDIAG-------ELSAKVGGTVQDVAEDPEGGFDPERSVPHKELRKMDRFIQMAMVAADE 112
Query: 140 ALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMA 199
AL +A W P + Q+ERT + GIG +A ++ + +RRLSPF IP L N+A
Sbjct: 113 ALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLA 172
Query: 200 SGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGF 259
+G +S+K+ F+GP VTACA +IGDA RMI+ G++DV++AGG E++ D +S+ GF
Sbjct: 173 AGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGF 232
Query: 260 CKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYG 319
+RAL+T ++ P ASRPFD RDGFV+GEG+ ++V+E L+HA RGA+ AE+ GYG
Sbjct: 233 AAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYG 292
Query: 320 MSGDAHHITQPHIDGKGAILAMTRALKQ 347
+ DA+H+T DG GA+ AM AL+
Sbjct: 293 TTADAYHMTAGPDDGSGAMRAMKLALRM 320
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 | Back alignment and structure |
|---|
Score = 469 bits (1209), Expect = e-166
Identities = 148/309 (47%), Positives = 199/309 (64%), Gaps = 16/309 (5%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVV+TGIG+VTPLG G W RLI GE GI + + + +
Sbjct: 21 RRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLV-------GEEYK-------SIPCS 66
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
VAA VP G G+FNE ++++ D +S++ A+ AA+ A+ D+ W P + + TG
Sbjct: 67 VAAYVPRGSDEGQFNEQNFVSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATG 126
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V+IG G+ + + A K ++SPFF+P+IL+NMA+G VS++Y +GPNHA T
Sbjct: 127 VAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVST 186
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
AC TGAH++GD+ R I GD+DVMVAGGT+S I LS+AGF ++RAL+T N P+ A R
Sbjct: 187 ACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALST--NSDPKLACR 244
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAI 338
PF RDGFV+GEG+ VLVLEE EHA +R A+IYAEV GYG+SGDA HIT P +G+GA+
Sbjct: 245 PFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGAL 304
Query: 339 LAMTRALKQ 347
M ALK
Sbjct: 305 RCMAAALKD 313
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 | Back alignment and structure |
|---|
Score = 436 bits (1124), Expect = e-153
Identities = 96/312 (30%), Positives = 150/312 (48%), Gaps = 22/312 (7%)
Query: 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQL 95
VVVTGI M T L AETTW+ L+ + GIR + + FD L
Sbjct: 25 KAFPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFV--EEFD----------L 72
Query: 96 TSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKE 155
++ + D L + R + + + +A D
Sbjct: 73 PVRIGGHLL-------EEFDHQLTRIELRRMGYLQRMSTVLSRRLWENAGSPEVD---TN 122
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHA 215
R VSIG G+GS + V + + + ++ +SP + + + N A+ V ++ +
Sbjct: 123 RLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMT 182
Query: 216 AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275
V+ACA+GA +I A + I G++D + GG E+ I+A+ +AGF + R + + N P
Sbjct: 183 PVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAG 242
Query: 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGK 335
A RPFD RDGFV GEG +L++E EHAK RGA I A + G ++ D H+ P +G+
Sbjct: 243 ACRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGE 302
Query: 336 GAILAMTRALKQ 347
A A+TRA++
Sbjct: 303 RAGHAITRAIQL 314
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 | Back alignment and structure |
|---|
Score = 432 bits (1114), Expect = e-152
Identities = 97/312 (31%), Positives = 148/312 (47%), Gaps = 23/312 (7%)
Query: 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQL 95
VVVT + T + E+TW+ L+ GE GI + + L
Sbjct: 9 GGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALE-------DEFVTKW-----DL 56
Query: 96 TSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKE 155
K+ + DS + D R ++ + A D +
Sbjct: 57 AVKIGGHLK-------DPVDSHMGRLDMRRMSYVQRMGKLLGGQLWESAGSPEVD---PD 106
Query: 156 RTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHA 215
R V +G G+G V++ ++ R++SP + I+ N A+ + ++ G +
Sbjct: 107 RFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMT 166
Query: 216 AVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275
V+AC++G+ +I A R I GD+DV V GG E I+AL +A F RA++T+ N P+
Sbjct: 167 PVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPER 225
Query: 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGK 335
ASRPFD RDGFV GE ++++E EHAK RGAK A + G G++ DA H+ P DG
Sbjct: 226 ASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGV 285
Query: 336 GAILAMTRALKQ 347
A AMTR+L+
Sbjct: 286 RAGRAMTRSLEL 297
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 | Back alignment and structure |
|---|
Score = 428 bits (1103), Expect = e-150
Identities = 148/309 (47%), Positives = 201/309 (65%), Gaps = 23/309 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
+RRVVVTG+G +TP+G G E + + G+ G+R IT FD L
Sbjct: 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT-------RFDAS-------ALPV 46
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
++AA V + ++L+ K+ R + RF+ YAL AA AL DA P D ER
Sbjct: 47 RIAAEVD-------VDPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDL-DPERV 98
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
G +G GIG + +++ E+ R+SPFFIP ++ NMAS H++M+YGF GP+ V
Sbjct: 99 GTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVV 158
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TACATGA ++G A RMIQ G++D+++AGGTE++I +++ F RAL+T+ N P++AS
Sbjct: 159 TACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKAS 217
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RPF RDGFV+GEG+GVLVLE EHAKKRGA+IYAE+ G+G S DAHHIT+PH +GKGA
Sbjct: 218 RPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGA 277
Query: 338 ILAMTRALK 346
LAM RALK
Sbjct: 278 ALAMARALK 286
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 | Back alignment and structure |
|---|
Score = 425 bits (1096), Expect = e-149
Identities = 98/309 (31%), Positives = 152/309 (49%), Gaps = 23/309 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
++RVV+TG+G VT LG + L G +R + ++D F L +
Sbjct: 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMP-------DWD------YFESLHT 51
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
++AA +P F + + K RS+ R YA+ A++ AL DA + + R
Sbjct: 52 RLAAPLP------GFAQPADWPRKKTRSMGRVSMYAVRASELALADAGFAGDESISDGRM 105
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
GV+ G GS+ M+ + ++ +++ + + +VS+ + +G
Sbjct: 106 GVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTS 165
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
+ACA+G+ +IG A I G +M+AGG E ++A F A +T+ N P
Sbjct: 166 SACASGSQAIGYAYENIAMGKQTLMLAGGAEELS-GPAVAVFDTLYATSTR-NDEPHLTP 223
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RPFD RDG V+GEG+ LVLEE EHAK RGA I+AE+ G+G + D H+TQP
Sbjct: 224 RPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQP--TASTM 281
Query: 338 ILAMTRALK 346
AM AL+
Sbjct: 282 ARAMQLALE 290
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 | Back alignment and structure |
|---|
Score = 426 bits (1097), Expect = e-149
Identities = 134/329 (40%), Positives = 178/329 (54%), Gaps = 29/329 (8%)
Query: 24 SSRAEVFDPPPLSP------LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPED 77
SS L P L RVVVTG G+ +P+G E W L G+ GI IT
Sbjct: 2 SSHHHHHHSSGLVPRGSHMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGIT--- 58
Query: 78 LKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAA 137
FD AA + +F D + KD + YAL AA
Sbjct: 59 ----KFDHS-------DFDVHNAAEIQ------DFPFDKYFVKKDTNRFDNYSLYALYAA 101
Query: 138 DEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197
EA++ A ++R GV + GIG I + D + EK +R+ P +P+ L N
Sbjct: 102 QEAVNHANLDVEAL-NRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPN 160
Query: 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 257
MASG+V+M++G G + TAC++ +IGDA R I+FG DVM+ GGTE+SI ++A
Sbjct: 161 MASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIA 220
Query: 258 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 317
GF AL+T P AS PFD R+GFV+GEGSG+LVLE LEHA+KRGA I AEV G
Sbjct: 221 GFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVG 278
Query: 318 YGMSGDAHHITQPHIDGKGAILAMTRALK 346
YG + DA+H+T PH +G+GAI A+ AL+
Sbjct: 279 YGNTCDAYHMTSPHPEGQGAIKAIKLALE 307
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 | Back alignment and structure |
|---|
Score = 425 bits (1094), Expect = e-149
Identities = 131/309 (42%), Positives = 189/309 (61%), Gaps = 23/309 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
RRVVVTGIG VTP+G AET+W G G+ ++T + +
Sbjct: 3 KRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMT-------RLNPD-------DFPV 48
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
K+AA + +F+ + +L K+ R + RF YA+ +A+ A+ D+ + D R
Sbjct: 49 KIAAELK------DFDVEKYLEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDS-NANRV 101
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
GV IG GIG + ++ + RR+SPFF+P ++ +M SG VS+++G +G N V
Sbjct: 102 GVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTV 161
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TACAT +SIGDA ++I+ GD+D M+ GG E+ I +S+AGF ++AL+ N P+ A
Sbjct: 162 TACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL--NPDPETAC 219
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RPFD RDGF+IGEG+G+++LEE EHAK RGAKIYAE+ GYG +GDA+HIT P +G+GA
Sbjct: 220 RPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGA 279
Query: 338 ILAMTRALK 346
AM A+
Sbjct: 280 ARAMKMAID 288
|
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 | Back alignment and structure |
|---|
Score = 425 bits (1095), Expect = e-148
Identities = 133/309 (43%), Positives = 194/309 (62%), Gaps = 22/309 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
RRVVVTG+GM++P+G E+TW+ L+ G+ GI I +FD +
Sbjct: 17 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLID-------HFDTS-------AYAT 62
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
K A +V +FN + ++ K+ R + FI Y + A +A+ D+ +++ R
Sbjct: 63 KFAGLVK------DFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEE-NATRI 115
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
G +IG GIG + + + R++SPFF+P ++NM +GH+++ YG +GP+ +
Sbjct: 116 GAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIA 175
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TA +G H+IG AAR+I +GD+DVMVAGG E + L + GF +RAL+T+ N PQ AS
Sbjct: 176 TAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAAS 234
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RP+D RDGFV+G+G+G+LVLEE EHAKKRGAKIYAE+ G+GMS DA+H+T P +G GA
Sbjct: 235 RPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGA 294
Query: 338 ILAMTRALK 346
LAM AL+
Sbjct: 295 ALAMANALR 303
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 | Back alignment and structure |
|---|
Score = 424 bits (1092), Expect = e-148
Identities = 132/309 (42%), Positives = 187/309 (60%), Gaps = 22/309 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
+RVVVTG+G +TP+G + W+ L+ G GI IT FD
Sbjct: 6 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPIT-------RFDAS-------DQAC 51
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
+ V +F+ +L+ K+ + + RF +A+CA+ +A++DAK + ++ +
Sbjct: 52 RFGGEVK------DFDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINEL-NADEI 104
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
GV IG GIG + D ++ +K R SPF IP ++ NMASG ++ G +GPN+ V
Sbjct: 105 GVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTV 164
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TACA G+++IGDA R++Q G + M+ GGTE++I LS AGF +RAL+ + N P AS
Sbjct: 165 TACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHAS 223
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RPFD RDGFV+GEGSG+L+LEELE A RGAKIY E+ GY M+ DA+HIT P DG+GA
Sbjct: 224 RPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGA 283
Query: 338 ILAMTRALK 346
A+ ALK
Sbjct: 284 TRAIAWALK 292
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 | Back alignment and structure |
|---|
Score = 423 bits (1091), Expect = e-148
Identities = 132/309 (42%), Positives = 191/309 (61%), Gaps = 23/309 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
+RVV+TG+G ++P+G +TTW + G GI +IT D E +
Sbjct: 27 NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKIT-------RIDTE-------PYSV 72
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
+A + FN + ++ K+ R + RF YA+ AA EA+ DA+ ++ +R
Sbjct: 73 HLAGELK------NFNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINEN-TADRI 125
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
GV IG GIG + A + + +K RR+SPFF+P ++ +MA+G VS+ G +GPN A V
Sbjct: 126 GVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATV 185
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TACATG +SIG+A +++Q GD+D M+ GGTE+ I +++AGF SRAL+T N + A
Sbjct: 186 TACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDIETAC 243
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
RPF GRDGFV+GEG+G+LV+E LE A+ RGA IYAE+ GYG +GDA+HIT P +G+G
Sbjct: 244 RPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGG 303
Query: 338 ILAMTRALK 346
AM A+
Sbjct: 304 SRAMQAAMD 312
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 | Back alignment and structure |
|---|
Score = 417 bits (1074), Expect = e-146
Identities = 100/317 (31%), Positives = 152/317 (47%), Gaps = 25/317 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
++R V+TG+G+V+ +G + L G GI + S
Sbjct: 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQ-------ELKDS-------GMRS 46
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
V V + ++ K R ++ YA + ++A+ DA P R
Sbjct: 47 HVWGNVK-------LDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRV 99
Query: 158 GVSIGGGIGSISDTVDAAQ-MICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAA 216
G+ G G GS V A M + L+ + P+ + + + + S ++ + G N++
Sbjct: 100 GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSI 159
Query: 217 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276
+ACAT AH IG+A IQ G D++ AGG E ++ F AL+TKYN TP++A
Sbjct: 160 SSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMAC-EFDAMGALSTKYNDTPEKA 218
Query: 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKG 336
SR +D RDGFVI G G++V+EELEHA RGA IYAE+ GYG + D + P G+G
Sbjct: 219 SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAP--SGEG 276
Query: 337 AILAMTRALKQVVHNVD 353
A+ M A+ V +D
Sbjct: 277 AVRCMKMAMHGVDTPID 293
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 | Back alignment and structure |
|---|
Score = 415 bits (1070), Expect = e-145
Identities = 112/316 (35%), Positives = 162/316 (51%), Gaps = 25/316 (7%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
+RRVVVTG+G+V+ +G E L + GI +
Sbjct: 22 MRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAE-------EYAEL-------GFRC 67
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
+V + + +S ++ + R R A+ A D+A+ DA + ERT
Sbjct: 68 QVHGAP-------DIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEV-SNERT 119
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
G+ +G G S VD+A + EK +R+ PF +P+ + + AS ++ + +G N++
Sbjct: 120 GIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSIS 179
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
+ACAT H IG+A MIQ+G D M AGG E LS+ F A+++KYN TP AS
Sbjct: 180 SACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSV-LFDAMGAMSSKYNDTPSTAS 238
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGA 337
R +D RDGFVI G+GVLVLE+LE A RGAKIY E+ GYG + D + + P G+GA
Sbjct: 239 RAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGA 296
Query: 338 ILAMTRALKQVVHNVD 353
I M AL V +D
Sbjct: 297 IRCMKMALSTVTSKID 312
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 | Back alignment and structure |
|---|
Score = 404 bits (1041), Expect = e-140
Identities = 93/315 (29%), Positives = 142/315 (45%), Gaps = 28/315 (8%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVV+TG+G+ P G G W L G R I+ FD S+
Sbjct: 3 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRIS-------FFDPS-------PYRSQ 48
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
VAA ++ + R +A+ A EA + L D R G
Sbjct: 49 VAAEAD------FDPVAEGFGPRELDRMDRASQFAVACAREAFAASG-LDPDTLDPARVG 101
Query: 159 VSIGGGIGSISDTVDAAQMICEK------RLRRLSPFFIPRILINMASGHVSMKYGFQGP 212
VS+G + + + ++ + LS ++ ++ V+ G +GP
Sbjct: 102 VSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGP 161
Query: 213 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 272
T C +G S+G+A R I+ G +DVM AG ++ I + +A F RA T + N
Sbjct: 162 VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR-NDD 220
Query: 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 332
P+ ASRPFD RDGFV+ EG+ + VLE+ + A RGA+I+AE+ GY +A+H+T
Sbjct: 221 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKA 280
Query: 333 DGKGAILAMTRALKQ 347
DG+ + AL +
Sbjct: 281 DGREMAETIRVALDE 295
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 | Back alignment and structure |
|---|
Score = 394 bits (1016), Expect = e-137
Identities = 78/309 (25%), Positives = 129/309 (41%), Gaps = 28/309 (9%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
+ V++TG+G+V P G G W ++ G G+ +T FD + +
Sbjct: 9 KSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVT-------RFDVS-------RYPAT 54
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
+A + +F+ + + AL AAD AL DAK P G
Sbjct: 55 LAGQID------DFHAPDHIPGRLLPQTDPSTRLALTAADWALQDAKADPESL-TDYDMG 107
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V G T + + + + +S + + +G +S+++G +GP+ A V
Sbjct: 108 VVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVA 167
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
A G ++G A R I+ G + ++V+GG +S++D S ++T P A
Sbjct: 168 EQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST--ATDPDRAYL 224
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGA 337
PFD G+V GEG +LVLE+ A+ RG Y E+ G + D + G
Sbjct: 225 PFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGR---PAGL 281
Query: 338 ILAMTRALK 346
A+ AL
Sbjct: 282 ERAIRLALN 290
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 369 bits (948), Expect = e-116
Identities = 63/341 (18%), Positives = 108/341 (31%), Gaps = 46/341 (13%)
Query: 16 DLSRYFSSSSRAEVFDPPPLSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITP 75
DL +S+ G + ET + G P
Sbjct: 931 DLE--PFEASKET----------AEQFKHQHGDKVDIFEIPET-GEYSVKLLKGATLYIP 977
Query: 76 EDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNS-KDHRSIARFIAYAL 134
+ L+ FDR VA +P G +N ++ S + + L
Sbjct: 978 KALR---FDR------------LVAGQIPTG-----WNAKTYGISDDIISQVDPITLFVL 1017
Query: 135 CAADEALHDAKWLPS----DQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFF 190
+ EA + G G G+G +S + + +
Sbjct: 1018 VSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDE-PVQNDIL 1076
Query: 191 IPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESS 250
+ M++ + GP V ACAT S+ I G + + + GG +
Sbjct: 1077 QESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDF 1136
Query: 251 IDALSMAGFCKSRALTT-----KYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAK 305
+ F +A + ++ TP E SRP R+GF+ +G+G+ ++ + + A
Sbjct: 1137 QE-EGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLAL 1195
Query: 306 KRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 346
K G IY V + D + P GKG +
Sbjct: 1196 KMGVPIYGIVAMAATATDKIGRSVPA-PGKGILTTAREHHS 1235
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 6e-04
Identities = 17/135 (12%), Positives = 32/135 (23%), Gaps = 6/135 (4%)
Query: 215 AAVTACATGAHSIGDAARMIQ--FGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGT 272
+ A + D G + A SS+ S K R
Sbjct: 1199 VPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREA 1258
Query: 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 332
+ + + E + ++ E +R +I+ E +
Sbjct: 1259 QIKDWVENELE---ALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAA-QQQWGNDFY 1314
Query: 333 DGKGAILAMTRALKQ 347
I + AL
Sbjct: 1315 KRDPRIAPLRGALAT 1329
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 | Back alignment and structure |
|---|
Score = 303 bits (776), Expect = 5e-93
Identities = 59/300 (19%), Positives = 96/300 (32%), Gaps = 33/300 (11%)
Query: 57 ETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116
T + + G + Q VA +P G ++
Sbjct: 1133 PETGQYTVRLRKGAT-LLIPK--------------ALQFDRLVAGQIPTG-----WDARR 1172
Query: 117 WLNSKDH-RSIARFIAYALCAADEALHDAKWLPSDQGQK----ERTGVSIGGGIGSISDT 171
+ +D + + Y L + EAL + + K G IG G+G S
Sbjct: 1173 YGVPEDIIQQVDPVTLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSAL 1232
Query: 172 VDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAA 231
+ + + MA+ + GP V ACAT S+
Sbjct: 1233 RGMYKDRYLDK-PVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGY 1291
Query: 232 RMIQFGDSDVMVAGG-----TESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286
I G + V + GG E S + +M ++ + P E SRP R+G
Sbjct: 1292 DTIMQGKARVCLVGGFDDFQEEGSYEFANMGATSNAKEEFAR-GREPGEMSRPTSTTRNG 1350
Query: 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 346
F+ +G GV V+ + A + G IY V + D + P G+G +
Sbjct: 1351 FMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPA-PGQGVLTTAREKSG 1409
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 | Back alignment and structure |
|---|
Score = 296 bits (758), Expect = 1e-90
Identities = 55/300 (18%), Positives = 97/300 (32%), Gaps = 33/300 (11%)
Query: 57 ETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116
T + G P+ L+ VA +P G +N +
Sbjct: 1158 PETGEYSVKLLKGATLYIPKALR---------------FDRLVAGQIPTG-----WNAKT 1197
Query: 117 WLNS-KDHRSIARFIAYALCAADEALHDAKWLPS----DQGQKERTGVSIGGGIGSISDT 171
+ S + + L + EA + G G G+G +S
Sbjct: 1198 YGISDDIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSAL 1257
Query: 172 VDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAA 231
+ + + + M++ + GP V ACAT S+
Sbjct: 1258 RGMFKDRFKDE-PVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGV 1316
Query: 232 RMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT-----KYNGTPQEASRPFDCGRDG 286
I G + + + GG + + F +A + ++ TP E SRP R+G
Sbjct: 1317 ETILSGKARICIVGGYDDFQE-EGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNG 1375
Query: 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 346
F+ +G+G+ ++ + + A K G IY V + D + P GKG +
Sbjct: 1376 FMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPA-PGKGILTTAREHHS 1434
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 71.8 bits (176), Expect = 9e-14
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 10/120 (8%)
Query: 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 257
M + +S + F+GP+ TAC++ ++ A + I+ G+ V GG + S
Sbjct: 139 MMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSL 198
Query: 258 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 317
F K L+ R FD G+ E ++L + A+ ++YA +
Sbjct: 199 QFMKLGMLS------QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLAR----RVYATILN 248
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 35/120 (29%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 257
+ASG V+ G +GP TAC++G ++ A ++ + + +AGG +
Sbjct: 177 VASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFT 236
Query: 258 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 317
F L +PF DGF + EG+GVLVL+ L A++ G + A +RG
Sbjct: 237 EFRSQGGLA------ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRG 290
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 2e-12
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA 257
+ASG +S G +GP+ + TAC++ ++ A ++ G+S + V GG
Sbjct: 155 VASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFV 214
Query: 258 GFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRG 317
F + RAL S+ F G DGF EG +++LE L A++ G ++ A VRG
Sbjct: 215 DFSRQRALA------ADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRG 268
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-08
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 198 MASGHVSMKYGFQGPNHAAV---TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDAL 254
M + +S + F+GP ++ TAC++ ++ +A + I G + GG +
Sbjct: 141 MMANRLSFFFDFRGP---SIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPN 197
Query: 255 SMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAE 314
+ F + L+ P+ + FD +G+ EG ++L + A+ ++YA
Sbjct: 198 TSVQFLRLGMLS------PEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLAR----RVYAT 247
Query: 315 VRG 317
+
Sbjct: 248 ILN 250
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401 | Back alignment and structure |
|---|
Score = 47.9 bits (115), Expect = 3e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C +G ++ AAR I G+ V + G ES
Sbjct: 89 CGSGLEAVAQAARAIWAGEGKVYIGSGVES 118
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 4e-06
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C + ++ AA+ I G+ DV V GG E
Sbjct: 94 CGSSMSALHTAAQAIMTGNGDVFVVGGVEH 123
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 1e-05
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C + ++ DAARMI GD+ V + GG E
Sbjct: 91 CGSSMQALHDAARMIMTGDAQVCLVGGVEH 120
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 4e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C++G ++ D A I+ G D+ +A G ES
Sbjct: 101 CSSGLTAVNDIANKIKVGQIDIGLALGVES 130
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394 | Back alignment and structure |
|---|
Score = 44.4 bits (106), Expect = 4e-05
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFC 260
C++G +I AA IQ G S+V+VAGG E+ +S + +
Sbjct: 91 CSSGMQAIMSAAMQIQLGVSEVVVAGGVEA----MSSSPYA 127
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 4e-05
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C +G S+ A+++I GD+D+M+ GG E+
Sbjct: 93 CGSGLRSVSMASQLIALGDADIMLVGGAEN 122
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395 | Back alignment and structure |
|---|
Score = 44.0 bits (105), Expect = 4e-05
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C +G S+ AA+ I G++DV++AGGTE+
Sbjct: 91 CGSGLKSVQLAAQSITSGENDVVIAGGTEN 120
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 6e-05
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C++G ++ A I+ G D+ +A G ES
Sbjct: 117 CSSGLQAVASIAGGIRNGSYDIGMACGVES 146
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C++G ++ D A I+ G D+ + G ES
Sbjct: 118 CSSGLQAVADVAAAIKAGFYDIGIGAGLES 147
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C +G ++ + I GD+ ++VAGG ES
Sbjct: 89 CGSGLRAVALGMQQIATGDASIIVAGGMES 118
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
C +G ++ A + I GDS ++VAGG E+
Sbjct: 92 CGSGLKAVCLAVQSIGIGDSSIVVAGGMEN 121
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 4e-04
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
CA+G +I A++ + G DVMVAGG ES
Sbjct: 94 CASGMKAIMMASQSLMCGHQDVMVAGGMES 123
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 6e-04
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 220 CATGAHSIGDAARMIQFGDSDVMVAGGTES 249
CA+G ++ AA+ ++ G D+++AGG ES
Sbjct: 96 CASGLEAVNTAAQKVRSGWDDLVLAGGVES 125
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| 3ho9_A | 427 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, | 100.0 | |
| 1e5m_A | 416 | KAS II, beta ketoacyl acyl carrier protein synthas | 100.0 | |
| 1ox0_A | 430 | Beta ketoacyl-acyl carrier protein synthase; trans | 100.0 | |
| 3o04_A | 413 | LMO2201 protein, beta-keto-acyl carrier protein sy | 100.0 | |
| 2gqd_A | 437 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli | 100.0 | |
| 3kzu_A | 428 | 3-oxoacyl-(acyl-carrier-protein) synthase II; seat | 100.0 | |
| 4ewg_A | 412 | Beta-ketoacyl synthase; ssgcid, structural genomic | 100.0 | |
| 1j3n_A | 408 | 3-oxoacyl-(acyl-carrier protein) synthase II; cond | 100.0 | |
| 2iwz_A | 438 | 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho | 100.0 | |
| 4ddo_A | 451 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci | 100.0 | |
| 2ix4_A | 431 | 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke | 100.0 | |
| 1tqy_A | 424 | Beta-ketoacyl synthase/acyl transferase; alpha-bet | 100.0 | |
| 3mqd_A | 428 | Beta-ketoacyl synthase; ssgcid, ALS collaborative | 100.0 | |
| 2vba_A | 406 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop | 100.0 | |
| 1tqy_B | 415 | Actinorhodin polyketide putative beta-ketoacyl SY; | 100.0 | |
| 2gp6_A | 434 | 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol | 100.0 | |
| 2wge_A | 416 | 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta | 100.0 | |
| 2qo3_A | 915 | Eryaii erythromycin polyketide synthase modules 3; | 100.0 | |
| 2hg4_A | 917 | DEBS, 6-deoxyerythronolide B synthase; ketosynthas | 100.0 | |
| 3hhd_A | 965 | Fatty acid synthase; transferase, multienzyme, meg | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 100.0 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 100.0 | |
| 1wl4_A | 397 | Acetyl-coenzyme A acetyltransferase 2; thiolase fo | 99.94 | |
| 1wdk_C | 390 | 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame | 99.94 | |
| 2iik_A | 418 | 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m | 99.94 | |
| 2vu1_A | 392 | Acetyl-COA acetyltransferase; acyltransferase, PHB | 99.93 | |
| 1afw_A | 393 | 3-ketoacetyl-COA thiolase; fatty acid metabolism; | 99.93 | |
| 2ib8_A | 395 | Acetyl-COA acetyltransferase; thiolase fold, potas | 99.93 | |
| 1ulq_A | 401 | Putative acetyl-COA acetyltransferase; structural | 99.93 | |
| 2wu9_A | 442 | 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o | 99.93 | |
| 3goa_A | 387 | 3-ketoacyl-COA thiolase; metabolism, fatty acid, p | 99.92 | |
| 4dd5_A | 396 | Acetyl-COA acetyltransferase; structural genomics, | 99.91 | |
| 3ss6_A | 394 | Acetyl-COA acetyltransferase; structural genomics, | 99.91 | |
| 4e1l_A | 395 | Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, | 99.9 | |
| 1ub7_A | 322 | 3-oxoacyl-[acyl-carrier protein] synthase; fatty a | 99.9 | |
| 1hnj_A | 317 | Beta-ketoacyl-acyl carrier protein synthase III; F | 99.9 | |
| 2ebd_A | 309 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.89 | |
| 3svk_A | 407 | Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, | 99.89 | |
| 1mzj_A | 339 | Beta-ketoacylsynthase III; beta-ketosynthase, arom | 99.89 | |
| 3tsy_A | 979 | Fusion protein 4-coumarate--COA ligase 1, resvera | 99.88 | |
| 1u0m_A | 382 | Putative polyketide synthase; type III polyketide | 99.88 | |
| 1zow_A | 313 | 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB | 99.87 | |
| 2h84_A | 374 | Steely1; thiolase-fold, type III polyketide syntha | 99.87 | |
| 2x3e_A | 331 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, | 99.86 | |
| 1u6e_A | 335 | 3-oxoacyl-[acyl-carrier-protein] synthase III; tra | 99.86 | |
| 3s21_A | 345 | 3-oxoacyl-[ACP] synthase III; non-decarboxylative | 99.83 | |
| 1ted_A | 393 | PKS18; thiolase fold, substrate binding tunnel, tr | 99.81 | |
| 4dfe_A | 333 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci | 99.81 | |
| 4egv_A | 520 | Acetyl-COA acetyltransferase; NEW SUB-family, thio | 99.76 | |
| 3led_A | 392 | 3-oxoacyl-acyl carrier protein synthase III; struc | 99.7 | |
| 2d3m_A | 406 | Pentaketide chromone synthase; chalcone synthase, | 99.69 | |
| 3gwa_A | 365 | 3-oxoacyl-(acyl-carrier-protein) synthase III; str | 99.68 | |
| 1xpm_A | 396 | 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s | 99.66 | |
| 3s3l_A | 357 | CERJ; acyltransferase, FABH homologue, KS III homo | 99.65 | |
| 3a5r_A | 387 | Benzalacetone synthase; chalcone synthase, type II | 99.65 | |
| 3il3_A | 323 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.65 | |
| 3h78_A | 359 | PQS biosynthetic enzyme; PQSD, anthranilic acid, a | 99.63 | |
| 1ee0_A | 402 | 2-pyrone synthase; polyketide synthase, thiolase f | 99.61 | |
| 1xes_A | 413 | Dihydropinosylvin synthase; native structure, tran | 99.6 | |
| 4efi_A | 354 | 3-oxoacyl-(acyl-carrier protein) synthase; structu | 99.6 | |
| 2f82_A | 450 | HMG-COA synthase; HMGS1, transferase; 2.10A {Brass | 99.57 | |
| 2p0u_A | 413 | Stilbenecarboxylate synthase 2; polyketide synthas | 99.57 | |
| 3e1h_A | 465 | PKSIIINC, putative uncharacterized protein; resorc | 99.56 | |
| 3euo_A | 379 | Type III pentaketide synthase; alpha helix, acyltr | 99.55 | |
| 1i88_A | 389 | CHS2, chalcone synthase 2; polyketide synthase, tr | 99.54 | |
| 4ewp_A | 350 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans | 99.54 | |
| 3il6_A | 321 | 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, | 99.53 | |
| 3lma_A | 347 | Stage V sporulation protein AD (spovad); NESG, str | 99.51 | |
| 3awk_A | 402 | Chalcone synthase-like polyketide synthase; type I | 99.5 | |
| 3oit_A | 387 | OS07G0271500 protein; type III polyketide synthase | 99.5 | |
| 3ov2_A | 393 | Curcumin synthase; type III polyketide synthase, t | 99.5 | |
| 3v4n_A | 388 | HMG-COA synthase; hydroxymethylglutaryl-COA syntha | 99.49 | |
| 3sqz_A | 425 | Putative hydroxymethylglutaryl-COA synthase; thiol | 99.44 | |
| 2v4w_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.38 | |
| 2p8u_A | 478 | Hydroxymethylglutaryl-COA synthase, cytoplasmic; h | 99.32 | |
| 3v7i_A | 413 | Putative polyketide synthase; type III polyketide | 99.29 | |
| 2wya_A | 460 | Hydroxymethylglutaryl-COA synthase, mitochondrial; | 99.24 |
| >3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-55 Score=427.96 Aligned_cols=303 Identities=44% Similarity=0.768 Sum_probs=283.9
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
.+++|+|||||+++|+|.+.++||++|++|++++.+++.++ ...++.++++.+++ ||+.+
T Consensus 16 ~~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~~ 75 (427)
T 3ho9_A 16 SKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFD--------------TSAYATKFAGLVKD------FNCED 75 (427)
T ss_dssp -CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTCSCCEEECCSS------CCCTT
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccceeeEcCC------CChhh
Confidence 37889999999999999999999999999999999998755 33556778888887 99999
Q ss_pred CCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhh
Q 018076 117 WLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (361)
Q Consensus 117 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (361)
|+++++.+.|+|+++|+++++++||+|||+++.+++ ..++||++|++.+++..++..+..+...++..+.|+.+++.+.
T Consensus 76 ~i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~-~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (427)
T 3ho9_A 76 IISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEEN-ATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIV 154 (427)
T ss_dssp TSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHST
T ss_pred cCCHHHHhhCCHHHHHHHHHHHHHHHHCCCCccccc-ccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccc
Confidence 999999999999999999999999999999988875 8999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 197 ~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
+.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|...++..+..|..++.++.+ +..|...
T Consensus 155 ~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~-~~~~~~~ 233 (427)
T 3ho9_A 155 NMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAA 233 (427)
T ss_dssp THHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHH
T ss_pred hHHHHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcccC-CCCCCcc
Confidence 999999999999999999999999999999999999999999999999999998899999999999999863 3335567
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
|+|||.+++|+++||||+++||+++++|+++|+++|++|.|++.++|+.+++.|.+.+.++.++|++||++|||+|+|||
T Consensus 234 ~~pfd~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 313 (427)
T 3ho9_A 234 SRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIG 313 (427)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cCCccCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEeecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHcc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||+|
T Consensus 314 ~ve~H 318 (427)
T 3ho9_A 314 YVNAH 318 (427)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99987
|
| >1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-55 Score=425.12 Aligned_cols=303 Identities=43% Similarity=0.722 Sum_probs=281.3
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
+|++|+|||||+++|.|.+.++||++|.+|++++.+++.++ ...++.++++.+++ ||+.+
T Consensus 5 ~m~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~i~~------fd~~~ 64 (416)
T 1e5m_A 5 EKKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFD--------------ASDQACRFGGEVKD------FDATQ 64 (416)
T ss_dssp -CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCS------CCGGG
T ss_pred CCCCEEEEeeeEECCCCCCHHHHHHHHHcCCCeEeeCCccc--------------cccCccceeEEeCC------CCccc
Confidence 35789999999999999999999999999999999987644 33556678888876 99888
Q ss_pred CCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhh
Q 018076 117 WLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (361)
Q Consensus 117 ~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (361)
++++++.+.|+|+++|+++++++||++||+++++++ ..+++|++|++.++...+++.+..+...++..+.|+.+++.+.
T Consensus 65 ~~~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 143 (416)
T 1e5m_A 65 FLDRKEAKRMDRFCHFAVCASQQAINDAKLVINELN-ADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIA 143 (416)
T ss_dssp TSCHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHST
T ss_pred cCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcC-ccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhh
Confidence 899999999999999999999999999999988774 8899999999999998888888888888888899999999999
Q ss_pred hHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 197 ~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
+.++++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|..+++..+.+|..++.++.+ +++|++.
T Consensus 144 ~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~ 222 (416)
T 1e5m_A 144 NMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHA 222 (416)
T ss_dssp THHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCGGGT
T ss_pred HHHHHHHHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCccCC-CCCCccc
Confidence 999999999999999999999999999999999999999999999999999987899999999999998853 4457789
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
|+|||.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+++.|++.+.++.++|++||++|||+|+|||
T Consensus 223 ~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId 302 (416)
T 1e5m_A 223 SRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVS 302 (416)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCccCCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||.|
T Consensus 303 ~ve~H 307 (416)
T 1e5m_A 303 YINAH 307 (416)
T ss_dssp EEECC
T ss_pred EEEEE
Confidence 99987
|
| >1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-55 Score=424.97 Aligned_cols=304 Identities=42% Similarity=0.659 Sum_probs=282.2
Q ss_pred CCCCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCC
Q 018076 35 LSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNE 114 (361)
Q Consensus 35 ~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~ 114 (361)
||+|++|+|||||+++|.|.+.++||++|.+|++++.+++.++ ...++.++++.+++ ||+
T Consensus 19 ~m~m~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~ 78 (430)
T 1ox0_A 19 HMKLNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFD--------------HSDFDVHNAAEIQD------FPF 78 (430)
T ss_dssp SCCCCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECCSS------CCH
T ss_pred cccCCCEEEEEEEEECCCcCCHHHHHHHHHcCCCeeeeCCccc--------------ccCCccceeeeccC------CCh
Confidence 4557899999999999999999999999999999999998654 33556677888876 998
Q ss_pred CCCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhh
Q 018076 115 DSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (361)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (361)
..++++++.++|+|+++|+++++++||++||+++++++ ..++||++|++.+++..+.+.+..+...+++.++|+.+++.
T Consensus 79 ~~~~~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (430)
T 1ox0_A 79 DKYFVKKDTNRFDNYSLYALYAAQEAVNHANLDVEALN-RDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKA 157 (430)
T ss_dssp HHHCCGGGGGTCCHHHHHHHHHHHHHHHHTTCCTTTSC-GGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHH
T ss_pred hhcCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhhcC-ccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhcc
Confidence 87899999999999999999999999999999988774 88999999999999988888888888888889999999999
Q ss_pred hhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCC
Q 018076 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (361)
Q Consensus 195 ~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~ 274 (361)
+++.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++. +.+|+
T Consensus 158 ~~~~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~--~~~p~ 235 (430)
T 1ox0_A 158 LPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPT 235 (430)
T ss_dssp STTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CSSTT
T ss_pred chhHHHHHHHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCccC--CCCCC
Confidence 9999999999999999999999999999999999999999999999999999999888988899999998884 34577
Q ss_pred CCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 275 ~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
..|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.|++.+.++.++|++||++|||+|+|
T Consensus 236 ~~~~pFd~~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 315 (430)
T 1ox0_A 236 RASIPFDKDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQ 315 (430)
T ss_dssp SSSCTTBTTCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred CCCCCCCCCCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHH
Confidence 89999999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||.|
T Consensus 316 Id~ve~H 322 (430)
T 1ox0_A 316 VAYVNAH 322 (430)
T ss_dssp CCCEECC
T ss_pred cCEEEEe
Confidence 9999987
|
| >3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-55 Score=422.76 Aligned_cols=303 Identities=44% Similarity=0.746 Sum_probs=285.3
Q ss_pred CCCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCC
Q 018076 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNED 115 (361)
Q Consensus 36 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~ 115 (361)
|+|++|+|||+|+++|+|.+.++||++|.+|++++.+++.++ ...++..+++.+++ ||+.
T Consensus 1 M~~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~ 60 (413)
T 3o04_A 1 MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLN--------------PDDFPVKIAAELKD------FDVE 60 (413)
T ss_dssp CCCCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------GGGSSCCEEECCSS------CCGG
T ss_pred CCCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccccccccCC------CChh
Confidence 457899999999999999999999999999999999998755 33456677888877 9999
Q ss_pred CCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhh
Q 018076 116 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (361)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (361)
+|+++++.+.|+|+++|+++++++||+|||+++.+++ ..++||++|++.++...++..+..+...++..+.|+.+++.+
T Consensus 61 ~~i~~~~~~~~d~~~~l~l~Aa~~AL~dAGl~~~~id-~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 139 (413)
T 3o04_A 61 KYLEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSN-ANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMI 139 (413)
T ss_dssp GTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHS
T ss_pred hccCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcC-ccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhccc
Confidence 9999999999999999999999999999999988885 899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCC
Q 018076 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (361)
Q Consensus 196 ~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 275 (361)
.++++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++. ..+|++
T Consensus 140 ~~~~a~~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls~--~~~p~~ 217 (413)
T 3o04_A 140 PDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSL--NPDPET 217 (413)
T ss_dssp TTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCTTT
T ss_pred ccHHHHHHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhcccccC--CCCCCC
Confidence 999999999999999999999999999999999999999999999999999999899999999999999984 345778
Q ss_pred CCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 276 ~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
.++|||.+++|+++||||+++||+++++|+++|.+++++|.|++.++|+++++.|.+.+.++.+++++||++|||+|+||
T Consensus 218 ~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dI 297 (413)
T 3o04_A 218 ACRPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKV 297 (413)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGC
T ss_pred CcCCCcCCCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
||||+|
T Consensus 298 d~ve~H 303 (413)
T 3o04_A 298 DYINAH 303 (413)
T ss_dssp CEEECC
T ss_pred CEEEEe
Confidence 999987
|
| >2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-55 Score=424.83 Aligned_cols=305 Identities=44% Similarity=0.737 Sum_probs=280.6
Q ss_pred CCCCCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCC
Q 018076 34 PLSPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFN 113 (361)
Q Consensus 34 ~~~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd 113 (361)
.|.||++|+|||||+++|+|.+.++||++|.+|++++.+++.++ ...++.++++.+++ ||
T Consensus 23 ~m~~~~~vaI~G~g~~~P~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~i~~------fd 82 (437)
T 2gqd_A 23 EMSQNKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRID--------------TEPYSVHLAGELKN------FN 82 (437)
T ss_dssp ----CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCSS------CC
T ss_pred cccCCCCEEEEEeeEECCCCCCHHHHHHHHHcCCCceeeCCccc--------------cccCccceeEEeCC------CC
Confidence 35557899999999999999999999999999999999987644 33556678888876 89
Q ss_pred CCCCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhh
Q 018076 114 EDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR 193 (361)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (361)
+.+++++++.+.|||+++|+++++++||+|||+++++++ ..+++|++|++.+++..+++.+..+...++..+.|+.+++
T Consensus 83 ~~~~~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 161 (437)
T 2gqd_A 83 IEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENT-ADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPM 161 (437)
T ss_dssp GGGTSCSTTTTTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHH
T ss_pred hhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCccccC-CcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhh
Confidence 887799999999999999999999999999999988774 8899999999999998888888888888888899999999
Q ss_pred hhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCC
Q 018076 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (361)
Q Consensus 194 ~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~ 273 (361)
.+.+.++++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|..+++..+.+|..++.++. +.+|
T Consensus 162 ~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~--~~~p 239 (437)
T 2gqd_A 162 LIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALST--NDDI 239 (437)
T ss_dssp HSTTHHHHHHHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC--CCCT
T ss_pred cchhHHHHHHHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCccC--CCCC
Confidence 99999999999999999999999999999999999999999999999999999998889999999999999985 3457
Q ss_pred CCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 274 ~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
+..|+|||.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+++.|++.+.++.++|++||++|||+|+
T Consensus 240 ~~~~~pfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~ 319 (437)
T 2gqd_A 240 ETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPK 319 (437)
T ss_dssp TTSSCTTCTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGG
T ss_pred ccccCCCCCCCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHh
Confidence 78999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
||||||.|
T Consensus 320 dId~ve~H 327 (437)
T 2gqd_A 320 DVQYLNAH 327 (437)
T ss_dssp GCCEEECC
T ss_pred hCCEEEEE
Confidence 99999987
|
| >3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-55 Score=426.92 Aligned_cols=310 Identities=54% Similarity=0.906 Sum_probs=285.7
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCC-CCCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG-ISSGEFNED 115 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~fd~~ 115 (361)
-|++|||||+|+++|+|.++++||++|++|+++|.+++.++ ...++..+++.++.. .....||+.
T Consensus 8 ~~~~~viTG~G~vsp~g~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~fd~~ 73 (428)
T 3kzu_A 8 HMRRVVITGLGLVSPLASGVEETWKRLLAGESGARRVTEFE--------------VDDLACQIACRIPVGDGTNGTFNPD 73 (428)
T ss_dssp -CCCEEEEEEEEECSSCBSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCBSSSSTTCBCGG
T ss_pred cccceEEEeceEECCCcCCHHHHHHHHHcCCCeeeeCCccc--------------cccCcCceeeEecccccccccCChh
Confidence 37899999999999999999999999999999999998765 345566778888721 113459999
Q ss_pred CCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCC-CCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhh
Q 018076 116 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPSD-QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (361)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~-~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (361)
+|+++++.+.|+|+++|+++++++||+|||+++.+ ++ ..++||++|++.+++..+.+.+..+...++..++|+.+++.
T Consensus 74 ~~i~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id-~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (428)
T 3kzu_A 74 LHMDPKEQRKVDPFIVYAVGAADQALDDAGWHPENDED-QVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGR 152 (428)
T ss_dssp GTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHH-HHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTT
T ss_pred hcCCHHHHHhCCHHHHHHHHHHHHHHHhcCCChhhhcc-ccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccc
Confidence 89999999999999999999999999999999876 53 67899999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCC
Q 018076 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (361)
Q Consensus 195 ~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~ 274 (361)
+.+..+++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++......|.
T Consensus 153 ~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~ 232 (428)
T 3kzu_A 153 LINLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKALSTERNDDPT 232 (428)
T ss_dssp CTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGG
T ss_pred hhhhHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHccccccCccCCcc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999875555667
Q ss_pred CCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 275 ~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
..++|||.+++|+++||||+++||+++++|+++|++|+++|.|++.++|+++++.|.+.+.++.+++++||++|||+|+|
T Consensus 233 ~~~~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d 312 (428)
T 3kzu_A 233 AASRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYGMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDE 312 (428)
T ss_dssp GTCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred cccCCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEEEccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||.|
T Consensus 313 Id~ve~H 319 (428)
T 3kzu_A 313 IDYINAH 319 (428)
T ss_dssp CCEEECC
T ss_pred eeEEEec
Confidence 9999986
|
| >4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-54 Score=419.74 Aligned_cols=300 Identities=33% Similarity=0.501 Sum_probs=278.7
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|++|+|||||+++|+|.+.++||++|.+|++++.+++.+++ ...++.++++.+++ ||+.+|
T Consensus 5 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~-------------~~~~~~~~~~~v~~------fd~~~~ 65 (412)
T 4ewg_A 5 MKRVVITGMGGVTALGSRWDEIEAALKAGRNAVRRMPDWDY-------------FESLHTRLAAPLPG------FAQPAD 65 (412)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCCEECGGGGG-------------SSSCCCCEEBCCSC------CCCCTT
T ss_pred CCEEEEEeeEEECCCcCCHHHHHHHHHcCCCceeeCCcccc-------------ccCCccceeeecCC------CChhhh
Confidence 67899999999999999999999999999999999987552 11456677888876 999988
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~-~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (361)
+++++.+.|+|+++|+++++++||+|||+ ++.+++ ..++||++|++.+++..+++++..+...+...+.++.+++.+.
T Consensus 66 i~~~~~~~~d~~~~l~l~aa~~Al~dAGl~~~~~i~-~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (412)
T 4ewg_A 66 WPRKKTRSMGRVSMYAVRASELALADAGFAGDESIS-DGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMP 144 (412)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHTCTTCGGGG-TTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHST
T ss_pred CCHHHHhhCCHHHHHHHHHHHHHHHhcCCCCccccC-ccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcc
Confidence 99999999999999999999999999999 666554 8899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 197 ~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
+.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|. +++.....|..++.++.. +..|+..
T Consensus 145 ~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~~~-~~~p~~~ 222 (412)
T 4ewg_A 145 HTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTR-NDEPHLT 222 (412)
T ss_dssp THHHHHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBCCC-TTCGGGC
T ss_pred cHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccccC-CCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999 999999999999999864 4556789
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|++|++.|+ +.++.++|++||++|||+|+|||
T Consensus 223 ~rpfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~--~~~~~~ai~~Al~~Agl~~~dId 300 (412)
T 4ewg_A 223 PRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFGCNSDGAHMTQPT--ASTMARAMQLALEDAKLDANAIA 300 (412)
T ss_dssp CCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSSCC--HHHHHHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHHHcCCCHHHCC
Confidence 9999999999999999999999999999999999999999999999999998874 77789999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||.|
T Consensus 301 ~ve~H 305 (412)
T 4ewg_A 301 YVNAH 305 (412)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99986
|
| >1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-54 Score=418.01 Aligned_cols=300 Identities=49% Similarity=0.824 Sum_probs=279.3
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
++|+|||||+++|+|.+.++||++|++|++++.+++.++ ...++.++++.+ + ||+.+++
T Consensus 2 ~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~~~~~~~~~--------------~~~~~~~~~~~~-~------fd~~~~~ 60 (408)
T 1j3n_A 2 RRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFD--------------ASALPVRIAAEV-D------VDPGAYL 60 (408)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECC-C------CCGGGTS
T ss_pred CCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeccccC--------------cccCccceEEEE-c------cChhhcC
Confidence 689999999999999999999999999999999987644 335566778888 4 9988889
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
++++.++|+|+++|+++++++||+|||+++++++ ..++||++|++.+++..+++.+..+...++..++|+.+++.+++.
T Consensus 61 ~~~~~~~~d~~~~l~~~aa~~AL~dAGl~~~~id-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (408)
T 1j3n_A 61 DRKELRRLDRFVQYALIAAQLALEDAGLKPEDLD-PERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANM 139 (408)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSC-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTH
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCCccccC-CCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhH
Confidence 9999999999999999999999999999988774 889999999999999988888888888889999999999999999
Q ss_pred HHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCc
Q 018076 199 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278 (361)
Q Consensus 199 ~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 278 (361)
++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|...+.++.. +..|+..|+
T Consensus 140 ~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~-~~~p~~~~~ 218 (408)
T 1j3n_A 140 ASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASR 218 (408)
T ss_dssp HHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHCC
T ss_pred HHHHHHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhcccccCC-CCCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999988899999999999988852 444567899
Q ss_pred CCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCccee
Q 018076 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 279 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
|||.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+++.|++.+.++.++|++||++|||+|+|||||
T Consensus 219 pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~v 298 (408)
T 1j3n_A 219 PFTLSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFGRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYI 298 (408)
T ss_dssp TTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEE
T ss_pred cCcCCCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEE
Confidence 99999999999999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred ecC
Q 018076 359 SIQ 361 (361)
Q Consensus 359 e~~ 361 (361)
|.|
T Consensus 299 e~H 301 (408)
T 1j3n_A 299 NAH 301 (408)
T ss_dssp ECC
T ss_pred EEe
Confidence 987
|
| >2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-54 Score=419.89 Aligned_cols=307 Identities=49% Similarity=0.822 Sum_probs=280.6
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.++|+|||||+++|+|.+.++||++|.+|++++.+++.++ ...++.++++++++..+...||+.+|
T Consensus 20 ~~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~fd~~~~ 85 (438)
T 2iwz_A 20 HRRVVITGIGLVTPLGVGTHLVWDRLIGGESGIVSLVGEE--------------YKSIPCSVAAYVPRGSDEGQFNEQNF 85 (438)
T ss_dssp ECCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCSGG--------------GTTSSCCEEECCCBSSSTTSBCGGGT
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCccccCCchh--------------cccCccceeeeeccccccccCChhhc
Confidence 4679999999999999999999999999999999998754 33566778888875222345999888
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCC-CCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLP-SDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~-~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (361)
+++++.++|+|+++|+++++++||+|||+++ .+++ ..++||++|++.+++..+++.+..+...+...++|+.+++.++
T Consensus 86 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 164 (438)
T 2iwz_A 86 VSKSDIKSMSSPTIMAIGAAELAMKDSGWHPQSEAD-QVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILV 164 (438)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHH-HHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCCccccc-CcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhh
Confidence 9999999999999999999999999999986 5553 6789999999999998888888888888888899999999999
Q ss_pred hHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 197 ~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
+.++++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|..+++..+..|..++.++.. .+|++.
T Consensus 165 ~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls~~--~~p~~~ 242 (438)
T 2iwz_A 165 NMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALSTN--SDPKLA 242 (438)
T ss_dssp THHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC--SCTTTS
T ss_pred hHHHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcCCC--CCCCcc
Confidence 999999999999999999999999999999999999999999999999999987899999999999998852 346789
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.|++.+.++.++|++||++|||+|+|||
T Consensus 243 ~~pfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId 322 (438)
T 2iwz_A 243 CRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEIS 322 (438)
T ss_dssp CCTTCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCC
T ss_pred cccCCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecceecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||+|
T Consensus 323 ~ve~H 327 (438)
T 2iwz_A 323 YINAH 327 (438)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99987
|
| >4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-54 Score=421.59 Aligned_cols=311 Identities=44% Similarity=0.730 Sum_probs=285.4
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCC--CCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCG--ISSGEFNE 114 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~fd~ 114 (361)
|+++|+|||||+++|+|.+.++||++|.+|++++.+++.++ ...++.++++.+++. .....||+
T Consensus 22 m~~~v~ItG~g~~~P~g~~~~~~w~~l~~g~s~i~~~~~~~--------------~~~~~~~~~g~v~~~~~~~~~~fd~ 87 (451)
T 4ddo_A 22 MTLRVVVTGIGIVSPLGCGKELVWQRLIGGGSGLRRLGDDI--------------AGELSAKVGGTVQDVAEDPEGGFDP 87 (451)
T ss_dssp --CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCHHH--------------HTTSSCCEEECCCCTTTCTTTCCCG
T ss_pred CCCCEEEEEeEEECCCCCCHHHHHHHHHcCCCeeeeCCccc--------------cccccCccceEccccccccccccch
Confidence 46899999999999999999999999999999999998654 345567788888731 11235999
Q ss_pred CCCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhh
Q 018076 115 DSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (361)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (361)
.+|+++++.+.|+|+++|+++++++||+|||+++.++.+..++||++|++.++....++.+..+...+...+.|+.+++.
T Consensus 88 ~~~i~~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (451)
T 4ddo_A 88 ERSVPHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFF 167 (451)
T ss_dssp GGTSCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHH
T ss_pred hhhCCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhcc
Confidence 99999999999999999999999999999999988762278999999999999999999999998888889999999999
Q ss_pred hhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCC
Q 018076 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (361)
Q Consensus 195 ~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~ 274 (361)
+.+.++++|++.||++||+++|+++|+|++.||..|+++|++|+||++||+|+|..+++..+..|...++++..++.+|.
T Consensus 168 ~~~~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~ 247 (451)
T 4ddo_A 168 LSNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALSTGFSEEPV 247 (451)
T ss_dssp CTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCSCTTSGG
T ss_pred ccchHHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhccCCCcCcc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999876666677
Q ss_pred CCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 275 ~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
..++|||.+++|+++||||+++||+++++|+++|.+|+++|.|++.++|+.+++.|.+.+.++.+++++||++|||+|+|
T Consensus 248 ~~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~d 327 (451)
T 4ddo_A 248 RASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQ 327 (451)
T ss_dssp GSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGG
T ss_pred ccccccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 89999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||+|
T Consensus 328 Id~ve~H 334 (451)
T 4ddo_A 328 VDYVNAH 334 (451)
T ss_dssp CCEEECC
T ss_pred cCEEEec
Confidence 9999987
|
| >2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-54 Score=420.53 Aligned_cols=319 Identities=76% Similarity=1.199 Sum_probs=285.9
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
++|+|||||+++|+|.+.++||++|++|++++++++.++|....|+++........++.++++++++..+...||+.+|+
T Consensus 1 ~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~fd~~~~~ 80 (431)
T 2ix4_A 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEALWL 80 (431)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHHHS
T ss_pred CcEEEEeeeEECCCCCCHHHHHHHHHcCCCeeeeCChhhhhccccccccccccccCcccceeEEeccccccccCChhhcC
Confidence 36999999999999999999999999999999999876655556665433222335677889999732123459987777
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKW-LPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~-~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++ .|+|+++|+++++++||++||+ ++.+++ ..++||++|++.+++..+++.+..+...++..+.|+.+++.+.+
T Consensus 81 ~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~i~-~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 156 (431)
T 2ix4_A 81 NSK---AVANFIGYAVCAADEALRDAEWLPTEEEE-KERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVN 156 (431)
T ss_dssp CST---TCCHHHHHHHHHHHHHHHHTTCCCCSHHH-HHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTT
T ss_pred Chh---hCCHHHHHHHHHHHHHHHHcCCCCccccC-CCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhH
Confidence 765 8999999999999999999999 766553 67899999999999988888888888888888999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|..+++..+..|..++.++.+++.+|+..+
T Consensus 157 ~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 236 (431)
T 2ix4_A 157 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEAS 236 (431)
T ss_dssp HHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSC
T ss_pred HHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccCccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999988889888999999999987777788999
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|||.+++|+++||||+++||+++++|+++|+++|++|+|++.++|+.+++.|++.+.++.++|++||+++||+|+||||
T Consensus 237 ~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 316 (431)
T 2ix4_A 237 RPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDY 316 (431)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred ccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCE
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||.|
T Consensus 317 ve~H 320 (431)
T 2ix4_A 317 VNAH 320 (431)
T ss_dssp EECC
T ss_pred EEEe
Confidence 9987
|
| >1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-54 Score=420.77 Aligned_cols=302 Identities=30% Similarity=0.485 Sum_probs=271.2
Q ss_pred CCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCC
Q 018076 37 PLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDS 116 (361)
Q Consensus 37 ~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~ 116 (361)
|+++|+|||||+++|+|.+.++||++|.+|++++.+++.++ ...++..+++.+ + ||+.+
T Consensus 1 M~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~~-~------fd~~~ 59 (424)
T 1tqy_A 1 MKRRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFD--------------PSPYRSQVAAEA-D------FDPVA 59 (424)
T ss_dssp --CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECC-C------CCHHH
T ss_pred CCCCEEEEeeEEECCCCCCHHHHHHHHHcCCCceeeCCCcc--------------cccCCcceeEEe-c------cCHhh
Confidence 34689999999999999999999999999999999997644 334556677777 4 99998
Q ss_pred C-CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHH--HhccCCCCCcchhh
Q 018076 117 W-LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC--EKRLRRLSPFFIPR 193 (361)
Q Consensus 117 ~-~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 193 (361)
| +++++.+.|||+++|+++++++||+|||+++++++ ..++||++|++.+++..+++.+..+. ..+.....++.++.
T Consensus 60 ~~i~~~~~~~~d~~~~l~l~aa~~AL~dAG~~~~~i~-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (424)
T 1tqy_A 60 EGFGPRELDRMDRASQFAVACAREAFAASGLDPDTLD-PARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRH 138 (424)
T ss_dssp HTCCHHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCC-GGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTT
T ss_pred cCCCHHHHHhcCHHHHHHHHHHHHHHHHCCCCchhcC-CCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcc
Confidence 8 99999999999999999999999999999988774 88999999999999988888887776 45566677776666
Q ss_pred hhhhHHHH----HHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccC
Q 018076 194 ILINMASG----HVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKY 269 (361)
Q Consensus 194 ~~~~~~a~----~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~ 269 (361)
.++++.++ +|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|..+++..+..|..++.++.+
T Consensus 139 ~~~~~~a~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls~~- 217 (424)
T 1tqy_A 139 MFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR- 217 (424)
T ss_dssp THHHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-
T ss_pred cccccccchhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhccccCC-
Confidence 66555455 9999999999999999999999999999999999999999999999998899999999999998853
Q ss_pred CCCCCCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcC
Q 018076 270 NGTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVV 349 (361)
Q Consensus 270 ~~~~~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Ag 349 (361)
+.+|++.|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.|++++.++.++|++||+++|
T Consensus 218 ~~~p~~~~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~p~~~g~~~~~ai~~al~~ag 297 (424)
T 1tqy_A 218 NDDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESR 297 (424)
T ss_dssp CSCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCccCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeEEcCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcceeecC
Q 018076 350 HNVDGFEQLSIQ 361 (361)
Q Consensus 350 l~~~dId~ie~~ 361 (361)
|+|+||||||.|
T Consensus 298 l~~~dId~ve~H 309 (424)
T 1tqy_A 298 TDATDIDYINAH 309 (424)
T ss_dssp CCGGGCCEEECC
T ss_pred CCHHHCCEEEec
Confidence 999999999987
|
| >3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-53 Score=414.85 Aligned_cols=298 Identities=37% Similarity=0.554 Sum_probs=272.6
Q ss_pred CCCCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCC
Q 018076 36 SPLRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNED 115 (361)
Q Consensus 36 ~~~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~ 115 (361)
|+|++|+|||||+++|+|.+.++||++|++|++++.+++.++ ...++.++++.+ + ||+.
T Consensus 20 ~~m~~V~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~g~~-~------fd~~ 78 (428)
T 3mqd_A 20 GSMRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYA--------------ELGFRCQVHGAP-D------IDIE 78 (428)
T ss_dssp --CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECC-C------CCHH
T ss_pred CCCCCEEEEeeEEECCCcCCHHHHHHHHHcCCCcceeCCccc--------------ccCCCccccccc-C------CChh
Confidence 446899999999999999999999999999999999998744 234556666663 3 8988
Q ss_pred CCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhh
Q 018076 116 SWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRIL 195 (361)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (361)
+|+++++.+.|+++++|+++++++||++||+++++++ ..++||++|++.+++..+++++..+...++..++|+.+++.+
T Consensus 79 ~~i~~~~~~~~d~~~~l~~~aa~~Al~dAGl~~~~i~-~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (428)
T 3mqd_A 79 SLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVS-NERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAM 157 (428)
T ss_dssp HHSCTGGGTTCCHHHHHHHHHHHHHHHHHTCCHHHHS-STTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHS
T ss_pred hcCCHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcc-ccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhcccc
Confidence 8899999999999999999999999999999887774 889999999999988888888888888889999999999999
Q ss_pred hhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCC
Q 018076 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (361)
Q Consensus 196 ~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 275 (361)
.+.++++|+..||++||+++|+++|+|++.||..|+++|++|+||++||||+|. +++.....|..++.++...+..|++
T Consensus 158 ~~~~a~~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls~~~~~~p~~ 236 (428)
T 3mqd_A 158 SSTASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMSSKYNDTPST 236 (428)
T ss_dssp TTHHHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCTTTTSGGG
T ss_pred ccHHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhcccccCCccc
Confidence 999999999999999999999999999999999999999999999999999998 7777777899999998766667888
Q ss_pred CCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 276 ~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
.|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.| .+.++.++|++||+ |++ +||
T Consensus 237 ~~rpfd~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dI 311 (428)
T 3mqd_A 237 ASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKI 311 (428)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCC
T ss_pred ccCcccCCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEEEcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-ccc
Confidence 9999999999999999999999999999999999999999999999999998887 56778999999999 999 999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
||||.|
T Consensus 312 d~ve~H 317 (428)
T 3mqd_A 312 DYINPH 317 (428)
T ss_dssp CEEECC
T ss_pred CEEEEe
Confidence 999986
|
| >2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-54 Score=413.93 Aligned_cols=296 Identities=33% Similarity=0.536 Sum_probs=266.6
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|++|+|||||+++|+|.+.++||++|.+|++++.+++.++ ...++.++++.++ ||+..|
T Consensus 1 m~~v~ItG~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~-------fd~~~~ 59 (406)
T 2vba_A 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELK--------------DSGMRSHVWGNVK-------LDTTGL 59 (406)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECCC-------CCCTTS
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCeEEeCCccc--------------ccCCccceEEEec-------CChhhc
Confidence 3689999999999999999999999999999999988543 2344556777664 888888
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCC-CcEEEEEeCCCCChHHHHHHHHHHH-HhccCCCCCcchhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQK-ERTGVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPRIL 195 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~-~~~gv~vg~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 195 (361)
+++++.++|+|+++|+++++++||++||+++++++ . .++||++|++.+++..+++.+..+. ..++..++|+.+++.+
T Consensus 60 ~~~~~~~~~d~~~~l~l~aa~~Al~dAg~~~~~i~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (406)
T 2vba_A 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQ-NNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAM 138 (406)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHTCCHHHHT-TCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHS
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHCCCChhHcC-CCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhh
Confidence 99999999999999999999999999999876554 5 8999999999999988888877665 4556667899999999
Q ss_pred hhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCC
Q 018076 196 INMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (361)
Q Consensus 196 ~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 275 (361)
.+.++++|++.||++||+++|+++|+|++.||..|+++|++|+||++||||+|..+.+..+. |..++.+++.++++|++
T Consensus 139 ~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls~~~~~~p~~ 217 (406)
T 2vba_A 139 ASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALSTKYNDTPEK 217 (406)
T ss_dssp TTHHHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBCCSCTTSGGG
T ss_pred hHHHHHHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-HhhccccccccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999977777777 99999998644455778
Q ss_pred CCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 276 ASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 276 ~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
.|+|||.+++|+++||||+++||+++++|+++|++||++|+|++.++|+.+++.|+ +.++.++|++||++|| +||
T Consensus 218 ~~~pfd~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dI 292 (406)
T 2vba_A 218 ASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPI 292 (406)
T ss_dssp SCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCC
T ss_pred ccCcCcCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEEEcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCc
Confidence 99999999999999999999999999999999999999999999999999988876 7778999999999999 899
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
||||.|
T Consensus 293 d~ve~H 298 (406)
T 2vba_A 293 DYLNSH 298 (406)
T ss_dssp CEEECC
T ss_pred cEEEee
Confidence 999987
|
| >1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=412.30 Aligned_cols=297 Identities=26% Similarity=0.380 Sum_probs=274.1
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.++|+|||||+++|+|.+.++||++|++|++++.++++++ ...++.++++++++ ||+.+|
T Consensus 8 ~~~v~I~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~--------------~~~~~~~~~~~v~~------fd~~~~ 67 (415)
T 1tqy_B 8 DKSVLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFD--------------VSRYPATLAGQIDD------FHAPDH 67 (415)
T ss_dssp --CEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTT--------------GGGSSCCEEECCCS------CCHHHH
T ss_pred CCCEEEEeeEEECCCCCCHHHHHHHHHcCCCcEEECCccc--------------ccCCCcceEEEeCC------CCchhc
Confidence 5789999999999999999999999999999999997543 22345677888876 998878
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.+.|+|+++|+++++++||++||+++++++ ..++||++|++.+++...++.+..+...++..++|+.+++.+.+
T Consensus 68 ~~~~~~~~~d~~~~l~l~aa~~AL~dAGl~~~~id-~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (415)
T 1tqy_B 68 IPGRLLPQTDPSTRLALTAADWALQDAKADPESLT-DYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYA 146 (415)
T ss_dssp SCTTTGGGCCHHHHHHHHHHHHHHHHTTCCGGGSC-GGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCCCccccC-CCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccch
Confidence 99999999999999999999999999999987774 88999999999999999999999888888889999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++|+..||++||+++|+++|+|++.||..|+++|++| +|++||||+|..+++..+..|..++.++. +.+|++.|
T Consensus 147 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls~--~~~~~~~~ 223 (415)
T 1tqy_B 147 VNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST--ATDPDRAY 223 (415)
T ss_dssp HHHHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC--CSCGGGSC
T ss_pred HHHHHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCccC--CCCCCCCc
Confidence 9999999999999999999999999999999999999999 99999999999899999999999999984 33356799
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCC-eeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~-~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
+|||.+++|+++||||+++||+++++|+++|+ ++|++|.|++.++|+.+++.|++ ++.++|++||++|||+|+|||
T Consensus 224 ~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId 300 (415)
T 1tqy_B 224 LPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVD 300 (415)
T ss_dssp CTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCC
T ss_pred CCCCCCCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEEEccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCC
Confidence 99999999999999999999999999999999 99999999999999999998887 558999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||.|
T Consensus 301 ~ve~H 305 (415)
T 1tqy_B 301 VVFAD 305 (415)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 99987
|
| >2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-52 Score=404.78 Aligned_cols=301 Identities=31% Similarity=0.492 Sum_probs=272.9
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
+++|+|||||+++|+|.+.++||++|++|++++.+++.+++.. ..++.++++++++ |+.+|
T Consensus 27 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~------------~~~~~~~~~~v~~-------d~~~~ 87 (434)
T 2gp6_A 27 FPYVVVTGIAMTTALATDAETTWKLLLDRQSGIRTLDDPFVEE------------FDLPVRIGGHLLE-------EFDHQ 87 (434)
T ss_dssp SCCEEEEEEEEECSSCSSHHHHHHHHHTTCCCEEECCCHHHHH------------HCCSCCEEECCSC-------CSTTS
T ss_pred CCCEEEEeeEEeCCCCCCHHHHHHHHHcCCCeeeeCCcccccc------------ccCccceeEEcCC-------chhhh
Confidence 5789999999999999999999999999999999998643111 1455677888863 44556
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.+.|||+++|+++++++||+|||+ +++ +..+++|++|++.+++..+++.+..+...+...+.|+.+++.+++
T Consensus 88 ~~~~~~~~~d~~~~l~l~aa~~ALedAG~--~~~-~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 164 (434)
T 2gp6_A 88 LTRIELRRMGYLQRMSTVLSRRLWENAGS--PEV-DTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPN 164 (434)
T ss_dssp SCHHHHHTCCHHHHHHHHHHHHHHHHTTC--CCC-CTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTT
T ss_pred CCHHHHHhCCHHHHHHHHHHHHHHHhcCC--Ccc-CCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchh
Confidence 89999999999999999999999999999 334 388999999999999988888888888888888999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcc-cccccCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSR-ALTTKYNGTPQEA 276 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~-~ls~~~~~~~~~~ 276 (361)
.++++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|....+..+..|..++ .++.+ +.+|++.
T Consensus 165 ~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~ls~~-~~~p~~~ 243 (434)
T 2gp6_A 165 GAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVMSTN-NDDPAGA 243 (434)
T ss_dssp HHHHHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSCCCC-TTCTTTS
T ss_pred hHHHHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHhcCC-CCCCCCc
Confidence 999999999999999999999999999999999999999999999999999988898899999988 66643 4457789
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId 356 (361)
|+|||.+++|+++||||+++||+++++|+++|++++++|.|++.++|+.+++.|++.+.++.++|++||++|||+|+|||
T Consensus 244 ~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId 323 (434)
T 2gp6_A 244 CRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGASITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDID 323 (434)
T ss_dssp CCSSBTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTTEE
T ss_pred eecccccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred eeecC
Q 018076 357 QLSIQ 361 (361)
Q Consensus 357 ~ie~~ 361 (361)
|||+|
T Consensus 324 ~ve~H 328 (434)
T 2gp6_A 324 HVNAH 328 (434)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 99987
|
| >2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-52 Score=402.64 Aligned_cols=301 Identities=32% Similarity=0.506 Sum_probs=273.6
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
+++|+|||||+++|+|.+.++||++|++|++++.+++.+++.. ..++.++++++++ |+.+|
T Consensus 11 ~~~vaI~G~g~~~p~g~~~~~~w~~l~~g~~~i~~~~~~~~~~------------~~~~~~~~~~~~~-------d~~~~ 71 (416)
T 2wge_A 11 FPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTK------------WDLAVKIGGHLKD-------PVDSH 71 (416)
T ss_dssp SCCEEEEEEEEEESSCSSHHHHHHHHHTTCCCCEECCCHHHHH------------HTCSCCEEBCCSS-------CGGGG
T ss_pred CCcEEEEeeEEECCCCCCHHHHHHHHHcCCCEEEeCCcccccc------------ccCCccEEEEeCC-------chhhh
Confidence 5689999999999999999999999999999999998643111 1345677888863 45556
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.+.|||+++|+++++++||++||+ +++ +..++||++|++.+++..+++.+..+...++..+.|+.+++.+.+
T Consensus 72 ~~~~~~~~~d~~~~l~l~aa~~AL~dAG~--~~~-~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 148 (416)
T 2wge_A 72 MGRLDMRRMSYVQRMGKLLGGQLWESAGS--PEV-DPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPN 148 (416)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHTTC--CCC-CGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred CCHHHHHhcCHHHHHHHHHHHHHHHHcCC--Ccc-CCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccch
Confidence 89999999999999999999999999999 444 388999999999999988888888888888889999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
..+++|++.||++||+++|+++|+|++.||..|+++|++|++|++||||+|....+..+..|...+.++. ++.+|+..|
T Consensus 149 ~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~~-~~~~~~~~~ 227 (416)
T 2wge_A 149 GAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMST-RNDEPERAS 227 (416)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBCC-CTTSGGGSC
T ss_pred hHHHHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhhc-cccCCcccc
Confidence 9999999999999999999999999999999999999999999999999999888888899999888875 245567899
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|||.+++|+++|||++++||+++++|+++|.+++++|+|++.++|+.+++.|++.+.++.++|+++|+++||+|+||||
T Consensus 228 ~pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ 307 (416)
T 2wge_A 228 RPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDH 307 (416)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCE
T ss_pred cccccCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEEEecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCE
Confidence 99999999999999999999999999999999999999999999999999999888899999999999999999999999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||+|
T Consensus 308 ve~H 311 (416)
T 2wge_A 308 VNAH 311 (416)
T ss_dssp EECC
T ss_pred EEEC
Confidence 9987
|
| >2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=423.90 Aligned_cols=304 Identities=18% Similarity=0.298 Sum_probs=271.1
Q ss_pred CCceEEEeeceeCCCC-CCHHHHHHHHHcCCCceeeCCccc-cccCCC-ccchhccccCCCcceeeEEeCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLG-CGAETTWRRLIVGECGIREITPED-LKMGNF-DRETQLHAFGQLTSKVAAVVPCGISSGEFNE 114 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~i~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~ 114 (361)
.++|+||||||++|+| .++++||++|.+|++.+++++..+ |+.+.| ++++.. ..+.+.+.++++++ ...||+
T Consensus 5 ~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~--~~~~~~~~~~~l~~---~~~FD~ 79 (915)
T 2qo3_A 5 SDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDN--PGTSYVDKGGFLDD---AAGFDA 79 (915)
T ss_dssp CCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTS--TTCBSCCEEBCCSC---SSEECH
T ss_pred CCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCccccc--CCCcccceeEEeCC---ccccCH
Confidence 4679999999999998 899999999999999999999887 866553 554432 33556778999976 456999
Q ss_pred CCC-CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhh
Q 018076 115 DSW-LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPR 193 (361)
Q Consensus 115 ~~~-~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (361)
.+| +++++.+.|||+++|+++++++||+|||+++++++ ..++|||+|++.+++.... .....+.++.+++
T Consensus 80 ~~f~i~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~-~~~~gV~vG~~~~~~~~~~--------~~~~~~~~~~~~g 150 (915)
T 2qo3_A 80 EFFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLR-GTATGVFLGVAKFGYGEDT--------AAAEDVEGYSVTG 150 (915)
T ss_dssp HHHTCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGT-TBCCEEEEECCCCCTTTTC--------C---CTTCHHHHT
T ss_pred hhcCCCHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcC-CcceEEEEEecCchHHhhh--------ccccccccccccc
Confidence 999 99999999999999999999999999999988775 8899999999877654321 1233467778888
Q ss_pred hhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCC
Q 018076 194 ILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTP 273 (361)
Q Consensus 194 ~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~ 273 (361)
...++++++|++.||++||+++|+++|+|++.||.+|+++|++|+||++||||+|..++|..+..|..++.++ +
T Consensus 151 ~~~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls------~ 224 (915)
T 2qo3_A 151 VAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA------A 224 (915)
T ss_dssp TCHHHHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC------S
T ss_pred ccccHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC------C
Confidence 8899999999999999999999999999999999999999999999999999999988999999999999998 6
Q ss_pred CCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 274 QEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 274 ~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
++.|+|||.+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.|.+.++.++|++||++|||+|+
T Consensus 225 ~g~~~~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~ 304 (915)
T 2qo3_A 225 DGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPG 304 (915)
T ss_dssp SCCCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGG
T ss_pred CCCcccccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHH
Confidence 68999999999999999999999999999999999999999999999999998777777888999999999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
||||||.|
T Consensus 305 dId~ve~H 312 (915)
T 2qo3_A 305 DVDAVEAH 312 (915)
T ss_dssp GCCEEECC
T ss_pred HCcEEEec
Confidence 99999987
|
| >2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-51 Score=426.06 Aligned_cols=294 Identities=20% Similarity=0.312 Sum_probs=262.4
Q ss_pred CCceEEEeeceeCCCC-CCHHHHHHHHHcCCCceeeCCccc-cccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLG-CGAETTWRRLIVGECGIREITPED-LKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNED 115 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g-~~~~~~~~~l~~g~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~ 115 (361)
.++|+||||||++|+| .++++||++|.+|++.+.+++..+ |.. ....+.++++++ ...||+.
T Consensus 38 ~~~iaIvG~~~~~Pgg~~~~~~~w~~L~~g~~~i~~~p~~r~~~~-------------~~~~~~~~~l~~---~~~fD~~ 101 (917)
T 2hg4_A 38 GEPIAIVGMACRFPGDVDSPESFWEFVSGGGDAIAEAPADRGWEP-------------DPDARLGGMLAA---AGDFDAG 101 (917)
T ss_dssp HCCEEEEEEEEEBTTTBCSHHHHHHHHHTTCCCCEECCGGGCCCC-------------CSSCCEEBCCTT---TTEECTG
T ss_pred CCCEEEEeceEECCCCCCCHHHHHHHHHcCCCccccCCcccccCC-------------CCCcceeeEecC---ccccChh
Confidence 3569999999999987 679999999999999999998876 521 122567888875 4569999
Q ss_pred CC-CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhh
Q 018076 116 SW-LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRI 194 (361)
Q Consensus 116 ~~-~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (361)
+| +++++.+.|||+++|+++++++||+|||+++.+++ ..++|||+|++.+++.... ......+.++.+++.
T Consensus 102 ~f~i~~~ea~~mdp~~rl~leaa~eALedAGi~~~~i~-~~~~gV~vG~~~~d~~~~~-------~~~~~~~~~~~~~g~ 173 (917)
T 2hg4_A 102 FFGISPREALAMDPQQRIMLEISWEALERAGHDPVSLR-GSATGVFTGVGTVDYGPRP-------DEAPDEVLGYVGTGT 173 (917)
T ss_dssp GGTCCHHHHHHSCHHHHHHHHHHHHHHHHTTCCGGGGT-TSCEEEEEEECCCCCSCCT-------TSSCGGGGGGHHHHH
T ss_pred hcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChHHcC-CcceEEEEEeCCchhhhhh-------hcCccccCccccccc
Confidence 99 99999999999999999999999999999988775 8899999999876543211 123444567778888
Q ss_pred hhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCC
Q 018076 195 LINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQ 274 (361)
Q Consensus 195 ~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~ 274 (361)
..++++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|...++..+..|..++.++ ++
T Consensus 174 ~~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls------~~ 247 (917)
T 2hg4_A 174 ASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLA------AD 247 (917)
T ss_dssp CHHHHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBC------TT
T ss_pred ccchHHHHHHHhcCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcC------Cc
Confidence 889999999999999999999999999999999999999999999999999999988898888999999998 67
Q ss_pred CCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 275 EASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 275 ~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
+.|+|||.+++|+++|||++++||+++++|+++|++||++|+|++.++|+.+...+.|.+.++.++|++||++|||+|+|
T Consensus 248 g~~~pFd~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~d 327 (917)
T 2hg4_A 248 GRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGD 327 (917)
T ss_dssp SCCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGG
T ss_pred cccCcccccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHH
Confidence 89999999999999999999999999999999999999999999999999987777778888999999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||.|
T Consensus 328 Id~veaH 334 (917)
T 2hg4_A 328 VDYVEAH 334 (917)
T ss_dssp CCEEECC
T ss_pred CCEEeec
Confidence 9999987
|
| >3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=410.26 Aligned_cols=291 Identities=19% Similarity=0.283 Sum_probs=256.1
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
+++|+||||||++|+|.++++||++|.+|++.+.+.+ .+|+...|+ . ....+.+++ ...||+.+|
T Consensus 3 ~~~IaIvGmg~r~P~~~~~~~~W~~l~~g~~~~~~~~-~~~~~~~~~----------~-~~~~g~~~~---~~~FD~~~f 67 (965)
T 3hhd_A 3 GEEVVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDD-RRWKAGLYG----------L-PRRSGKLKD---LSRFDASFF 67 (965)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEECSS-SSSCTTGGG----------C-CSCEECCSC---SSCCCTTTT
T ss_pred CCCEEEEeeeEECCCCCCHHHHHHHHHcCCCcccCCC-ccccccccc----------C-cccccccCC---hhhcChhhc
Confidence 5789999999999999999999999999999999865 456543331 1 123455654 466999999
Q ss_pred -CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhh
Q 018076 118 -LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (361)
Q Consensus 118 -~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (361)
+++++.+.|||+++|+++++++||+|||+++++++ ..++||++|++.+++. .....++..+.++.+.+...
T Consensus 68 ~i~~~ea~~mDp~~rL~leaa~eALedAGi~~~~i~-~~~~Gv~vG~~~~d~~-------~~~~~~~~~~~~~~~~g~~~ 139 (965)
T 3hhd_A 68 GVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLR-GTHTGVWVGVSGSETS-------EALSRDPETLVGYSMVGCQR 139 (965)
T ss_dssp TCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGT-TSCCEEEEEECCCHHH-------HHHTSCTTTCCTHHHHHHST
T ss_pred CCCHHHHhhcCHHHHHHHHHHHHHHHHcCCChHHcC-CceeEEEEeccchhHH-------HHHhcCccccCccccccccc
Confidence 99999999999999999999999999999988875 8999999998765432 23345667788888999999
Q ss_pred hHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 197 ~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
++++++|++.||++||+++|+++|+|++.||++|+++|++|+||++||||+|..++|..+..|.+++.++ |++.
T Consensus 140 ~~~a~ris~~lgl~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls------~~g~ 213 (965)
T 3hhd_A 140 AMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS------PEGT 213 (965)
T ss_dssp THHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC------TTCC
T ss_pred chHHHHHHHHhCCCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC------CCCc
Confidence 9999999999999999999999999999999999999999999999999999989999999999999999 7799
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC-CCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-ITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
|+|||.+++|+++|||++++||+++++|+ +||++|+|++.++|+.+ .....|++.++.++|++||++|||+|+||
T Consensus 214 ~~~Fd~~adG~~~gEGagavvL~~l~~A~----~i~a~I~g~~~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dI 289 (965)
T 3hhd_A 214 CKAFDTAGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESF 289 (965)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEGGGCS----SCSEEEEEEEEEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGE
T ss_pred cccchhccCCccccceEEEEEEecHHHcC----cccEEEEeeeccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHh
Confidence 99999999999999999999999999885 49999999999999976 22334567778999999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
||||.|
T Consensus 290 dyvEaH 295 (965)
T 3hhd_A 290 EYIEAH 295 (965)
T ss_dssp EEEECC
T ss_pred cccccc
Confidence 999987
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=434.38 Aligned_cols=289 Identities=20% Similarity=0.295 Sum_probs=256.2
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|++|+||||||++|+|.++++||++|.+|++.+.+.+ .+|+.+.|+ . ...+|.+++ ...||+.+|
T Consensus 1 m~~iaI~G~~~~~p~~~~~~~~w~~l~~g~~~~~~~~-~~~~~~~~~----------~-~~~~g~~~~---~~~fd~~~f 65 (2512)
T 2vz8_A 1 MEEVVIAGMSGKLPESENLEEFWANLIGGVDMVTADD-RRWKAGLYG----------L-PRRMGKLKD---LSRFDASFF 65 (2512)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECS-SSSCTTGGG----------C-CSEEECCSC---SSCCCTTTT
T ss_pred CCCEEEEeeeeeCCCCCCHHHHHHHHHcCCccccCCC-ccccccccc----------C-cccceecCC---cccCCHhhc
Confidence 3689999999999999999999999999999999854 456544221 1 234666665 466999999
Q ss_pred -CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhh
Q 018076 118 -LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILI 196 (361)
Q Consensus 118 -~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (361)
+++++.+.|||+++|+++++++||++||+++..+. ..++|||+|++.+++.. ....++..+.++.+.+...
T Consensus 66 ~i~~~ea~~~dpq~rl~l~~~~eAle~Ag~~~~~~~-~~~~gv~~G~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 137 (2512)
T 2vz8_A 66 GVHSKQANTMDPQLRMLLEVTYEAIVDGGINPASLR-GTSTGVWVGVSSSDASE-------ALSRDPETLVGYSMIGCQR 137 (2512)
T ss_dssp TCCHHHHHTSCHHHHHHHHHHHHHHGGGTCCGGGGT-TCSCEEEEEECCCHHHH-------HTTSCTTTSCGGGGGGTST
T ss_pred CCCHHHHHhcCHHHHHHHHHHHHHHHHCCCChhhcC-CCCeEEEEEeccHHHHH-------HHhcCccccCcceecccch
Confidence 99999999999999999999999999999877664 88999999997664332 2234556678889999999
Q ss_pred hHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 197 ~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
++++++||+.||++||+++|+++|+||+.||++|++.|++|+||++||||++..++|..+..|.++++|| |++.
T Consensus 138 ~~~a~ris~~~~l~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~ls------~~g~ 211 (2512)
T 2vz8_A 138 AMMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS------QDGT 211 (2512)
T ss_dssp THHHHHHHHHHTCCSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCBC------TTCS
T ss_pred hHHHHHHHHHhCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCCC------CCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 7799
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
|+|||.++|||++|||++++|||++++|+ +|||+|+|+++++||++ ++.| ++.++.++|++||++|||+|+
T Consensus 212 c~~Fd~~adG~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~~n~dg~~~~~~t~P--~~~~q~~~i~~al~~ag~~p~ 285 (2512)
T 2vz8_A 212 CRSFDAEGTGYCRAEAVVAVLLTKKSLAR----RVYATILNAGTNTDGSKEQGVTFP--SGDVQEQLIRSLYAPAGPDPE 285 (2512)
T ss_dssp CCSSSTTCCCBCBBCEEEEEEEEEGGGCS----CCSEEEEEEEEEECCCCTTCSSSC--CHHHHHHHHHTTSGGGSSCTT
T ss_pred CCCCCCCCCCcceeeeEEEEEEEEHHHCC----cccEEEEEEEEcCCCCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHH
Confidence 99999999999999999999999999985 59999999999999963 5555 577889999999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
||+|||-|
T Consensus 286 ~i~yveaH 293 (2512)
T 2vz8_A 286 SLEYIEAH 293 (2512)
T ss_dssp SCCEEECC
T ss_pred HCCEEEee
Confidence 99999976
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=364.71 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=221.9
Q ss_pred CCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-CCchhhcccCHHHHH
Q 018076 54 CGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIAY 132 (361)
Q Consensus 54 ~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~-~~~~~~~~~~~~~~l 132 (361)
.+.++||+.|.+|.+.+.+.. ..++..++|++++ .||+.+| |++++.+.|||+++|
T Consensus 1133 ~~~~~~w~~L~~G~~~i~p~~------------------~~~~~~~aG~i~~-----~FD~~~fgI~~~ea~~mDp~~~l 1189 (1878)
T 2uv9_A 1133 PETGQYTVRLRKGATLLIPKA------------------LQFDRLVAGQIPT-----GWDARRYGVPEDIIQQVDPVTLY 1189 (1878)
T ss_dssp TTTSCEEEEECTTCEEEEEEE------------------ECCSCCEEEECCT-----TCCHHHHTCCHHHHHHSCHHHHH
T ss_pred CChHHHHHHHHcCCCeeeecC------------------CCCcceEEEEeCC-----CCCHhhcCCCHHHHHhcCHHHHH
Confidence 566889999999999988732 1455678999984 3999999 999999999999999
Q ss_pred HHHHHHHHHHHCCCC-CCC----CCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHH-H
Q 018076 133 ALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM-K 206 (361)
Q Consensus 133 ~l~a~~~Al~dAg~~-~~~----~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~-~ 206 (361)
+++++.+||++||++ +.+ + +..++|+++|++.|++..+...+...+.. ..+.++.+++.+.|+++++|++ .
T Consensus 1190 ~L~aa~eAL~~AGi~~p~e~~~~i-~~s~vGv~vGsg~gg~~~~~~~~~~~~~~--~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A 1190 VLVSVAEALLSSGITDPYEFYKYV-HLSEVGNCIGSGVGGTSALRGMYKDRYLD--KPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp HHHHHHHHHHTTTCSSGGGHHHHS-CGGGEEEEEEESSCCHHHHHHHHTTTTTT--CCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCChhhhhccc-CccceEEEEccCCccHHHHHHHHHHHHhc--CCCCchhhhcchHHHHHHHHHHHh
Confidence 999999999999997 554 4 38899999999999988777666543332 2367888899999999999999 5
Q ss_pred cCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccccccc-----CCCCCCCCCcCCC
Q 018076 207 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPFD 281 (361)
Q Consensus 207 lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-----~~~~~~~~~~pfd 281 (361)
|+++||+++++++|+|++.||+.|++.|++|+||+|||||+|. +++.....|..+++++.. ++.+|++.|||||
T Consensus 1267 lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~als~~~de~a~g~~p~~~~RPfd 1345 (1878)
T 2uv9_A 1267 LSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGATSNAKEEFARGREPGEMSRPTS 1345 (1878)
T ss_dssp CCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHTTTCCTTSSCCSSB
T ss_pred cCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhhcCCCcccCcCCCc
Confidence 9999999999999999999999999999999999999999998 889999999999999842 3456889999999
Q ss_pred CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCC
Q 018076 282 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 332 (361)
Q Consensus 282 ~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~ 332 (361)
.+++||++|||++++||+++++|+++|++||++|.|+++++|+.+.+.|.|
T Consensus 1346 ~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paP 1396 (1878)
T 2uv9_A 1346 TTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTATDKIGRSVPAP 1396 (1878)
T ss_dssp TTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCSSCC
T ss_pred cCCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEecCCCccCCCCC
Confidence 999999999999999999999999999999999999999999987655544
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-41 Score=362.06 Aligned_cols=252 Identities=21% Similarity=0.293 Sum_probs=220.4
Q ss_pred CCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-CCchhhcccCHHHHH
Q 018076 54 CGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIAY 132 (361)
Q Consensus 54 ~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~-~~~~~~~~~~~~~~l 132 (361)
.+.++||++|.+|.+.+.+.+. .++..++|++++ .||+.+| |++++.+.|||+++|
T Consensus 1158 ~~~~~~w~~L~~G~~~i~p~~~------------------~~~~~~aG~i~~-----~FD~~~fgI~~~ea~~mDp~~~l 1214 (1887)
T 2uv8_A 1158 PETGEYSVKLLKGATLYIPKAL------------------RFDRLVAGQIPT-----GWNAKTYGISDDIISQVDPITLF 1214 (1887)
T ss_dssp TTTSCEEEEECTTCEEEEEEEE------------------CCSCCEEECCCT-----TCCTTTTTCCHHHHHHSCHHHHH
T ss_pred CchHHHHHHHHcCCceeecccC------------------CCCccEEEEECC-----CCChhhcCCCHHHHHhcCHHHHH
Confidence 3578899999999998887432 445678999984 3999999 999999999999999
Q ss_pred HHHHHHHHHHHCCCC-CCC----CCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH-
Q 018076 133 ALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK- 206 (361)
Q Consensus 133 ~l~a~~~Al~dAg~~-~~~----~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~- 206 (361)
+++++.+||++||++ +.+ + +..++|+++|++.|++..+...+...+.. ..+.++.++..+.|+++++|++.
T Consensus 1215 ~L~aa~eAL~dAGi~dp~e~~~~i-~~s~vGv~vGs~~gg~~~~~~~~~~~~~~--~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A 1215 VLVSVVEAFIASGITDPYEMYKYV-HVSEVGNCSGSGMGGVSALRGMFKDRFKD--EPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp HHHHHHHHHHHTTCSSGGGHHHHS-CGGGEEECCEESSCCHHHHHHHHTTTTTT--CCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCChhhhhccc-CCceeEEEeccCCccHHHHHHHHHHHHhc--CCCCcchhhcchhhHHHHHHHHHH
Confidence 999999999999995 555 4 37899999999999988777666543322 23678888899999999999995
Q ss_pred cCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccccccc-----CCCCCCCCCcCCC
Q 018076 207 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPFD 281 (361)
Q Consensus 207 lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-----~~~~~~~~~~pfd 281 (361)
||++||+++|+++|+||+.||+.|++.|++|+||+|||||+|. +++.....|..+++++.. .+.+|++.|||||
T Consensus 1292 lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~als~~~~e~~~g~~p~~~~RPfd 1370 (1887)
T 2uv8_A 1292 ISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPAT 1370 (1887)
T ss_dssp TCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCHHHHHHTTCCGGGSCCTTB
T ss_pred cCCccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhhccchhhhcccCCCccCcCCCc
Confidence 9999999999999999999999999999999999999999998 899999999999999842 2355788999999
Q ss_pred CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCC
Q 018076 282 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHI 332 (361)
Q Consensus 282 ~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~ 332 (361)
.+++||++|||++++||+++++|+++|++||++|.|+++++|+.+.+.|.|
T Consensus 1371 ~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~Dg~~~s~paP 1421 (1887)
T 2uv8_A 1371 TTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVPAP 1421 (1887)
T ss_dssp TTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCSCSCTTCC
T ss_pred ccCCCcccccceEEEEEccHHHHHHCCCceEEEEeeeEEecCCccccCCCC
Confidence 999999999999999999999999999999999999999999987654443
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-42 Score=359.18 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=216.6
Q ss_pred CCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-CCchhhcccCHHHHH
Q 018076 54 CGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRSIARFIAY 132 (361)
Q Consensus 54 ~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~-~~~~~~~~~~~~~~l 132 (361)
.+.++||++|.+|.+.+.+.. ..++..++|++++ .||+.+| |++++.+.|||+++|
T Consensus 959 ~~~eefW~~L~~G~~~i~p~~------------------~~~~~~vaG~Ip~-----gFD~~~fGIs~~ea~~mDP~qrL 1015 (1688)
T 2pff_A 959 PETGEYSVKLLKGATLYIPKA------------------LRFDRLVAGQIPT-----GWNAKTYGISDDIISQVDPITLF 1015 (1688)
T ss_dssp CCCCSSSCCCCCCTTCCCCCC------------------CCEECCSSCSCCC-----CCCCCCSSCCTTTBTTBCSSTTH
T ss_pred CCHHHHHHHHHcCCCEEecCC------------------CCCCceEEEEECC-----CCChhhCCCCHHHHhccCHHHHH
Confidence 356889999999999887732 2445677888874 3999999 999999999999999
Q ss_pred HHHHHHHHHHHCCCC-CCC----CCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHH-H
Q 018076 133 ALCAADEALHDAKWL-PSD----QGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM-K 206 (361)
Q Consensus 133 ~l~a~~~Al~dAg~~-~~~----~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~-~ 206 (361)
+++++.+||++||++ +.+ + +..++|+++|++.+++..+...+...+.. ..+.++.++..+.|+++++++. .
T Consensus 1016 aLeAa~EALedAGI~dP~ei~~~i-~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~--~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A 1016 VLVSVVEAFIASGITDPYEMYKYV-HVSEVGNCSGSGMGGVSALRGMFKDRFKD--EPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp HHHHHHHHHTTTTCSSGGGGGGGT-CCSCSCCCCCCCSCCCSSHHHHHHSSSSC--CCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred HHHHHHHHHHHcCCCChHHhcccc-CCceEEEEecccCCCHHHHHHHHHHHHhc--CCCCcchhccccHHHHHHHHHHHH
Confidence 999999999999997 554 4 37899999999999987776665533222 2367788889999999999999 7
Q ss_pred cCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccccccc-----CCCCCCCCCcCCC
Q 018076 207 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK-----YNGTPQEASRPFD 281 (361)
Q Consensus 207 lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~-----~~~~~~~~~~pfd 281 (361)
||++||+++|+++|+||+.||..|++.|++|+||+|||||+|. +++.....|..+++++.. ++.+|++.|||||
T Consensus 1093 LGl~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaLS~~~~e~a~G~~Pd~~cRPFd 1171 (1688)
T 2pff_A 1093 ISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKATSNTLEEFEHGRTPAEMSRPAT 1171 (1688)
T ss_dssp CCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCSCCTTTTTTSSCCSSSSCCSSS
T ss_pred cCCcCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhccccccChhhhhcCCChhhccCcCc
Confidence 9999999999999999999999999999999999999999998 788888889999998843 2355889999999
Q ss_pred CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCC
Q 018076 282 CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQP 330 (361)
Q Consensus 282 ~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p 330 (361)
.+++||++||||+++||+++++|+++|++||++|.|+++++|+.+.+.|
T Consensus 1172 ~~rdGfv~GEGAGavVLesle~Al~~G~~IyAvI~GsavnsDg~~~Sip 1220 (1688)
T 2pff_A 1172 TTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATDKIGRSVP 1220 (1688)
T ss_dssp SSCCCCCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCCCCCCSSSC
T ss_pred cCCCCCccccceEEEEeCcHHHHHHCCCceEEEEEEEEEECCCCccCCC
Confidence 9999999999999999999999999999999999999999998865433
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=349.27 Aligned_cols=303 Identities=21% Similarity=0.274 Sum_probs=251.7
Q ss_pred CCCCCHHHHHHHHHcCCCc--eeeCCc-cccccCCC-ccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-CCchhhcc
Q 018076 51 PLGCGAETTWRRLIVGECG--IREITP-EDLKMGNF-DRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-LNSKDHRS 125 (361)
Q Consensus 51 p~g~~~~~~~~~l~~g~~~--i~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~-~~~~~~~~ 125 (361)
+.-.+.++.|+...++.+. |.+.+. .+|+...+ .+.........++.+++|++++ .||+.+| |++++.+.
T Consensus 2569 ~~~~s~~~a~~~~~~~~~~~~i~~~~~~~~W~~~~~~~~~i~~p~~~~~~~~~gG~i~d-----~FD~~~fgIs~rea~~ 2643 (3089)
T 3zen_D 2569 FVVSSEADARAFVQFDPEHTVARPLPDSSDWEVTRKAGTEIRVPRKTKLSRTVGAQIPT-----GFDPTVWGISPDMASS 2643 (3089)
T ss_dssp CEEECHHHHHHHHTTSTTSEEEEECTTTCCEEEEECTTCEEEEEEEECCSCCEEECCCT-----TCCTTTTTCCHHHHHH
T ss_pred cccCCHHHHHHHHHhCCCcceEEeCCCCcceeeeecCCCCcCCCCcCCccceEEEEcCC-----CCChhhcCCCHHHHHh
Confidence 3334778888888776543 555555 45765543 2222222233567788999974 3999999 99999999
Q ss_pred cCHHHHHHHHHHHHHHHHCCCCCCCCC---CCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHH
Q 018076 126 IARFIAYALCAADEALHDAKWLPSDQG---QKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 202 (361)
Q Consensus 126 ~~~~~~l~l~a~~~Al~dAg~~~~~~~---~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 202 (361)
|||+++|+++++++||++||+++.+++ +..++||++|++.|+.......+..++. +..... ..++..+.+..+++
T Consensus 2644 mDp~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~aa~ 2721 (3089)
T 3zen_D 2644 IDRVALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLL-GRAKPN-DILQEVLPNVVAAH 2721 (3089)
T ss_dssp SCHHHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHT-TCCCCT-THHHHTSTTHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhc-CCCccc-hhhccccccHHHHH
Confidence 999999999999999999999987652 3789999999999999888887776654 333333 35677788999999
Q ss_pred HHHH-cCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccc-----cCCCCCCCC
Q 018076 203 VSMK-YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT-----KYNGTPQEA 276 (361)
Q Consensus 203 is~~-lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~-----~~~~~~~~~ 276 (361)
++.. ||++||+++|+++|+||++||++|+++|++|+||++||||+|. +++..+..|..+++++. ..+..|++.
T Consensus 2722 is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~~~~~~~~sp~~~ 2800 (3089)
T 3zen_D 2722 VMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTEMMRAKGISDSKF 2800 (3089)
T ss_dssp HHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHHHHHHTTCCTTTS
T ss_pred HHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcchhhhhccCCcccc
Confidence 9975 5999999999999999999999999999999999999999998 89999999999998873 134568899
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCc-------HHHHHHHHHHHHHcC
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG-------KGAILAMTRALKQVV 349 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g-------~~~~~a~~~Al~~Ag 349 (361)
|+|||.+++||++||||+++||+++++|+++|++||++|.|.+.++|+.+.+.|.|.. .++.++|++||++||
T Consensus 2801 crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AG 2880 (3089)
T 3zen_D 2801 SRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQSFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLG 2880 (3089)
T ss_dssp CCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTT
T ss_pred cCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEEEecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999877666641 244679999999999
Q ss_pred CCCCCcceeecC
Q 018076 350 HNVDGFEQLSIQ 361 (361)
Q Consensus 350 l~~~dId~ie~~ 361 (361)
|+|+||||||.|
T Consensus 2881 l~p~DIdyVEaH 2892 (3089)
T 3zen_D 2881 VGADDIAVISKH 2892 (3089)
T ss_dssp CCGGGEEEEECC
T ss_pred CCHHHeeEEEEe
Confidence 999999999976
|
| >1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-27 Score=228.85 Aligned_cols=196 Identities=24% Similarity=0.370 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
.+|+++++++||+|||+++++++ ++++|+..+... ...++.+++..||+
T Consensus 31 ~~L~~~a~~~Al~dAGl~~~~id-----~v~~g~~~~~~~--------------------------~~~~a~~ia~~lgl 79 (397)
T 1wl4_A 31 QDLGSTVIKEVLKRATVAPEDVS-----EVIFGHVLAAGC--------------------------GQNPVRQASVGAGI 79 (397)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTTS--------------------------CSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCCC--------------------------CCHHHHHHHHHcCC
Confidence 67999999999999999887776 799998554211 12467889999999
Q ss_pred --CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHH-------------------HH----H--hh
Q 018076 210 --QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSM-------------------AG----F--CK 261 (361)
Q Consensus 210 --~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~-------------------~~----~--~~ 261 (361)
+||+++|+++|+|++.||..|+++|++|++|++||+|+|.... |... .+ | ..
T Consensus 80 ~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 159 (397)
T 1wl4_A 80 PYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILCDGLTDAFHNCH 159 (397)
T ss_dssp CTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHHHTTBCTTTCCB
T ss_pred CCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhccccccCccccch
Confidence 8999999999999999999999999999999999999996432 2100 00 0 01
Q ss_pred ccccccc----CC-------------------------------------------CCCCC------------CCcC-CC
Q 018076 262 SRALTTK----YN-------------------------------------------GTPQE------------ASRP-FD 281 (361)
Q Consensus 262 ~~~ls~~----~~-------------------------------------------~~~~~------------~~~p-fd 281 (361)
++.++++ |+ .+++. .++| ||
T Consensus 160 ~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvfd 239 (397)
T 1wl4_A 160 MGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNIEAMSKLKPYFL 239 (397)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHHTSCCSSC
T ss_pred HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCHHHHhcCCCccC
Confidence 1111100 00 00111 4889 99
Q ss_pred CCCCccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 282 CGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 282 ~~~~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
.+++|++ ++|||+++||++++.|+++|.+++++|.|++.+++ .|++.+.+...++++||+++||+|+|
T Consensus 240 ~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~d 314 (397)
T 1wl4_A 240 TDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWSQVGV-----EPSIMGIGPIPAIKQAVTKAGWSLED 314 (397)
T ss_dssp CSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred CCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEEEeec-----ChhhccchHHHHHHHHHHHcCCCHHH
Confidence 9999999 99999999999999999999999999999999874 34555667799999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||+|
T Consensus 315 Id~ie~~ 321 (397)
T 1wl4_A 315 VDIFEIN 321 (397)
T ss_dssp CCEEEEC
T ss_pred CCEEEEe
Confidence 9999986
|
| >1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.2e-27 Score=227.27 Aligned_cols=198 Identities=20% Similarity=0.267 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 129 FIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dA-g~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
..+|+++++++||++| |+++++++ ++++|+..+... ..+.++.+|+..|
T Consensus 30 ~~~L~~~a~~~AL~dA~gl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~ia~~l 79 (390)
T 1wdk_C 30 AEDMSAHLISKVLERNSKVDPGEVE-----DVIWGCVNQTLE-------------------------QGWNIARMASLMT 79 (390)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGEE-----EEEEECSSBSBT-------------------------TTTTHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCC-----EEEEEeeccccC-------------------------CCCcHHHHHHHHc
Confidence 4689999999999999 99876665 899998543211 1245788999999
Q ss_pred CC--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHHHHHH-----h--------hccc-------
Q 018076 208 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALSMAGF-----C--------KSRA------- 264 (361)
Q Consensus 208 gl--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~~~~~-----~--------~~~~------- 264 (361)
|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.... |.....| . .++.
T Consensus 80 gl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 159 (390)
T 1wdk_C 80 QIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGK 159 (390)
T ss_dssp SSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGGGSHHHHHHHHHH
T ss_pred CCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcchhHHHHHHHHHHH
Confidence 99 8999999999999999999999999999999999999996322 2211000 0 0111
Q ss_pred ---cccc---------------------CCCC--CC------CCCcCCCCC---------------------CCccc---
Q 018076 265 ---LTTK---------------------YNGT--PQ------EASRPFDCG---------------------RDGFV--- 288 (361)
Q Consensus 265 ---ls~~---------------------~~~~--~~------~~~~pfd~~---------------------~~G~v--- 288 (361)
+++. +.++ |. +.++|||.+ ++|++
T Consensus 160 ~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~i~~p~~G~vt~~ 239 (390)
T 1wdk_C 160 MHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKPAFNPKGGTVTAG 239 (390)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCCSSCTTTCCCCGG
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCCcccCCCCcEech
Confidence 1110 0000 10 112689888 79999
Q ss_pred ----ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 289 ----IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 289 ----~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
++|||+++||++++.|+++|.+++++|+|++.+++. |++.+.+...++++||++|||+|+||||||+|
T Consensus 240 ~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~ 311 (390)
T 1wdk_C 240 TSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMAVAGVD-----PAIMGYGPVPATQKALKRAGLNMADIDFIELN 311 (390)
T ss_dssp GBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECC-----GGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred hcCcccchhheeEEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCChhhCcEEEec
Confidence 999999999999999999999999999999998753 44445667899999999999999999999987
|
| >2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=219.36 Aligned_cols=197 Identities=19% Similarity=0.272 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|+++++++||++||+++++++ +|++|+..++.. ....+..++..+|
T Consensus 55 ~~~L~~~Aa~~AL~dAgl~~~~id-----~v~~g~~~~~~~--------------------------~~~~a~~~a~~lG 103 (418)
T 2iik_A 55 PDELLSAVMTAVLKDVNLRPEQLG-----DICVGNVLQPGA--------------------------GAIMARIAQFLSD 103 (418)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECSSSBGG--------------------------GHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCccc--------------------------cccHHHHHHHHcC
Confidence 478999999999999999988776 799998543211 1345566778899
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH-----------------------HHHHHh--
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL-----------------------SMAGFC-- 260 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~-----------------------~~~~~~-- 260 (361)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.... |. .+....
T Consensus 104 l~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~a 183 (418)
T 2iik_A 104 IPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLIPMGITSENVA 183 (418)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGSCHHHHHHHHH
T ss_pred CCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccccHHHHHHHHH
Confidence 9 7899999999999999999999999999999999999996433 10 010000
Q ss_pred -----------------------h--cccccccC-----------------CCCCCCCCcC-------------CCCCC-
Q 018076 261 -----------------------K--SRALTTKY-----------------NGTPQEASRP-------------FDCGR- 284 (361)
Q Consensus 261 -----------------------~--~~~ls~~~-----------------~~~~~~~~~p-------------fd~~~- 284 (361)
. .+.+.... ...++..+|| ||.++
T Consensus 184 ~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~~~~vfd~~~~ 263 (418)
T 2iik_A 184 ERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGS 263 (418)
T ss_dssp HHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHHCCCSSSTTCC
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhhCCCcccCCCc
Confidence 0 01110000 0012457888 99875
Q ss_pred ----CcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeec
Q 018076 285 ----DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSI 360 (361)
Q Consensus 285 ----~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~ 360 (361)
||+.++|||+++||++++.|+++|.+|+++|.|++.++. .|+..+.+...++++||++|||+|+||||||+
T Consensus 264 ~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~ 338 (418)
T 2iik_A 264 TTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGV-----PPDIMGIGPAYAIPVALQKAGLTVSDVDIFEI 338 (418)
T ss_dssp CCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEE
T ss_pred eeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEEeccC-----CchhcchhHHHHHHHHHHHcCCCHHHCCeeee
Confidence 999999999999999999999999999999999988763 34444667789999999999999999999999
Q ss_pred C
Q 018076 361 Q 361 (361)
Q Consensus 361 ~ 361 (361)
|
T Consensus 339 h 339 (418)
T 2iik_A 339 N 339 (418)
T ss_dssp C
T ss_pred e
Confidence 7
|
| >2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=6.3e-27 Score=224.31 Aligned_cols=197 Identities=18% Similarity=0.281 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|+++++++||++||+++++++ ++++|+..+.. ....++.+++..+|
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~--------------------------~~~~~a~~ia~~lg 75 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVN-----EVILGQVLPAG--------------------------EGQNPARQAAMKAG 75 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC--------------------------CCcHHHHHHHHHcC
Confidence 367999999999999999887776 78888754321 01246788999999
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH---HH--------HHh--------------
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS---MA--------GFC-------------- 260 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~---~~--------~~~-------------- 260 (361)
++ ||+++|+++|+|++.||..|+++|++|++|++||+|+|.... |.. .. .+.
T Consensus 76 l~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T 2vu1_A 76 VPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIKDGLTDAFYGY 155 (392)
T ss_dssp CCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHHHHTBCTTTCC
T ss_pred CCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhhcccccccccc
Confidence 98 999999999999999999999999999999999999996322 210 00 000
Q ss_pred hcccc----------cc---------------------cCCCC--CC-----CCCcCCCCC-------------------
Q 018076 261 KSRAL----------TT---------------------KYNGT--PQ-----EASRPFDCG------------------- 283 (361)
Q Consensus 261 ~~~~l----------s~---------------------~~~~~--~~-----~~~~pfd~~------------------- 283 (361)
.++.+ ++ .+..+ |. ..++|||.+
T Consensus 156 ~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~e~~~~~~~v~ 235 (392)
T 2vu1_A 156 HMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATLDSMAKLRPAF 235 (392)
T ss_dssp BHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCHHHHHTCCCSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCHHHHhcCCCcc
Confidence 01111 10 00000 10 126789887
Q ss_pred -CCccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 284 -RDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 284 -~~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
++|++ ++|||+++||++++.|+++|.+++++|.|++.+++ .|++.+.+...++++||+++||+|+||
T Consensus 236 ~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~dI 310 (392)
T 2vu1_A 236 DKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGDL 310 (392)
T ss_dssp CTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGC
T ss_pred CCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEEEeec-----ChhhcchhHHHHHHHHHHHcCCCHHHc
Confidence 78999 99999999999999999999999999999999874 344456667899999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
||||+|
T Consensus 311 d~ie~~ 316 (392)
T 2vu1_A 311 DLVEAN 316 (392)
T ss_dssp SEEEEC
T ss_pred CEEEec
Confidence 999987
|
| >1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.1e-26 Score=220.45 Aligned_cols=195 Identities=18% Similarity=0.201 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHHHCC----CCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHH
Q 018076 130 IAYALCAADEALHDAK----WLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 205 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg----~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 205 (361)
.+|+++++++||++|| +++++++ +|++|+..++. ..+.++.+++.
T Consensus 36 ~~La~~Aa~~Al~~Ag~~~~l~~~~id-----~v~~g~~~~~~--------------------------~~~~~a~~va~ 84 (393)
T 1afw_A 36 DYLLYNFLNEFIGRFPEPLRADLNLIE-----EVACGNVLNVG--------------------------AGATEHRAACL 84 (393)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC-----CEEEECSSSBG--------------------------GGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCHHHCC-----EEEEEecCCCC--------------------------CCChHHHHHHH
Confidence 5799999999999999 9887776 79999854321 13567889999
Q ss_pred HcCC--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH-----------H--HHH-----hhccc
Q 018076 206 KYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS-----------M--AGF-----CKSRA 264 (361)
Q Consensus 206 ~lgl--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~-----------~--~~~-----~~~~~ 264 (361)
.+|+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.... |.. + .++ ..++.
T Consensus 85 ~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 164 (393)
T 1afw_A 85 ASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNREAKKCLIPMGI 164 (393)
T ss_dssp HTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTTGGGGGSCHHH
T ss_pred HcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhcccccccchhHHH
Confidence 9999 7999999999999999999999999999999999999985221 110 0 011 11111
Q ss_pred cccc----CC----------------------------------------CCCCC------------CCcC-CCCCCCcc
Q 018076 265 LTTK----YN----------------------------------------GTPQE------------ASRP-FDCGRDGF 287 (361)
Q Consensus 265 ls~~----~~----------------------------------------~~~~~------------~~~p-fd~~~~G~ 287 (361)
++++ |+ .++++ .++| ||.++ |+
T Consensus 165 ~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~rpvf~~~~-G~ 243 (393)
T 1afw_A 165 TNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIRPAFIKDR-GT 243 (393)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCCBSCC----CC
T ss_pred HHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCCCcccCCC-CC
Confidence 1000 00 00112 2456 87554 77
Q ss_pred c-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeec
Q 018076 288 V-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSI 360 (361)
Q Consensus 288 v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~ 360 (361)
+ ++|||+++||+++++|+++|.+++++|.|++.+++. |+..+.+...++++||++|||+|+||||||+
T Consensus 244 vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~-----p~~~~~~~~~a~~~al~~Agl~~~dId~ve~ 318 (393)
T 1afw_A 244 TTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQTVGVP-----PEIMGVGPAYAIPKVLEATGLQVQDIDIFEI 318 (393)
T ss_dssp CBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHHTCCGGGCSEEEE
T ss_pred eechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEEEeccC-----hhhcchhHHHHHHHHHHHcCCCHHHCCEEEE
Confidence 6 899999999999999999999999999999999873 3344567799999999999999999999999
Q ss_pred C
Q 018076 361 Q 361 (361)
Q Consensus 361 ~ 361 (361)
|
T Consensus 319 h 319 (393)
T 1afw_A 319 N 319 (393)
T ss_dssp C
T ss_pred e
Confidence 7
|
| >2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.7e-26 Score=218.56 Aligned_cols=196 Identities=20% Similarity=0.249 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|+++++++||++||+++++++ ++++|+..+.. ....++.+++..||
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id-----~~~~g~~~~~~--------------------------~~~~~a~~va~~lg 80 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVK-----EAYMGNVLQGG--------------------------EGQAPTRQAVLGAG 80 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCchHHHHHHHHcC
Confidence 367999999999999999887776 78888744311 11235778999999
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH------------------HHHH---------
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL------------------SMAG--------- 258 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~------------------~~~~--------- 258 (361)
+ +||+++|+++|+|++.||..|+++|++|++|++||+|+|.... +. .+..
T Consensus 81 l~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (395)
T 2ib8_A 81 LPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLIVKDGLTDVYNKIH 160 (395)
T ss_dssp CCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHHHHHTTEETTTTEE
T ss_pred CCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccccccccccccccch
Confidence 9 8999999999999999999999999999999999999996222 11 0111
Q ss_pred --------Hhhccccccc--------------------CCC------------------CCCCCCcC--CCC--------
Q 018076 259 --------FCKSRALTTK--------------------YNG------------------TPQEASRP--FDC-------- 282 (361)
Q Consensus 259 --------~~~~~~ls~~--------------------~~~------------------~~~~~~~p--fd~-------- 282 (361)
....+ +++. +.. ..++.++| |+.
T Consensus 161 m~~~a~~~~~~~g-~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~~~~~l~~l~~~f 239 (395)
T 2ib8_A 161 MGSCAENTAKKLN-IARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRVDFSKVPKLKTVF 239 (395)
T ss_dssp HHHHHHHHHHHHT-CCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSCCTTTGGGSCCTT
T ss_pred HHHHHHHHHHHcC-CCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccCCHHHHhcCCccc
Confidence 01111 0000 000 01111222 554
Q ss_pred -CCCccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 283 -GRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 283 -~~~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
+++|++ ++|||+++||++++.|+++|.+++++|+|++.++ +.|...+.+...++++||++|||+|+|
T Consensus 240 ~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~d 314 (395)
T 2ib8_A 240 QKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFADAA-----VEPIDFPIAPVYAASMVLKDVGLKKED 314 (395)
T ss_dssp CSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEE-----CCGGGGGGHHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEEEec-----cChhhccccHHHHHHHHHHHcCCCHHH
Confidence 568999 9999999999999999999999999999999875 234445667799999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||+|
T Consensus 315 Id~ie~~ 321 (395)
T 2ib8_A 315 IAMWEVN 321 (395)
T ss_dssp EEEEEEC
T ss_pred cCEEEEc
Confidence 9999986
|
| >1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=9.4e-26 Score=216.73 Aligned_cols=196 Identities=20% Similarity=0.237 Sum_probs=150.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|+++++++||++||+++++++ +|++|+..++.. ..+.++.+++..||
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id-----~v~~g~~~~~~~-------------------------~~~~~a~~va~~lG 75 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE-----DVYAGCANQAGE-------------------------DNRNVARMALLLAG 75 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCSST-------------------------TTTTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecccCCC-------------------------CCChHHHHHHHHhC
Confidence 357999999999999999988776 899998543211 02456889999999
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hHH--------------H----------HHHh-
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-ALS--------------M----------AGFC- 260 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~~--------------~----------~~~~- 260 (361)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.... |.. + .++.
T Consensus 76 l~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p 155 (401)
T 1ulq_A 76 FPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYDTTLGWRFVNPKMQ 155 (401)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEETTSSCCSCCHHHH
T ss_pred CCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 7999999999999999999999999999999999999986333 210 0 0110
Q ss_pred -h-----cccc---------------------ccc---------CCCC---C--------------CC------------
Q 018076 261 -K-----SRAL---------------------TTK---------YNGT---P--------------QE------------ 275 (361)
Q Consensus 261 -~-----~~~l---------------------s~~---------~~~~---~--------------~~------------ 275 (361)
. ++.+ +++ +..+ | ++
T Consensus 156 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d~~~r~~~t~e~~~ 235 (401)
T 1ulq_A 156 ALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQDEGPRRDTSLEKLA 235 (401)
T ss_dssp HHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCHHHHH
T ss_pred cccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccccccCCCCCHHHHh
Confidence 0 1110 000 0000 1 11
Q ss_pred CCcC-CCCCCCccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHH
Q 018076 276 ASRP-FDCGRDGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347 (361)
Q Consensus 276 ~~~p-fd~~~~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~ 347 (361)
.++| ||. +|++ ++|||+++||+++++|+++|.+++++|.|++.+++.. +..+.+...++++||++
T Consensus 236 ~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p-----~~~~~~~~~a~~~al~~ 308 (401)
T 1ulq_A 236 ALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGVPP-----RIMGIGPVPATRKALER 308 (401)
T ss_dssp HSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEEEEECCG-----GGGGGTHHHHHHHHHHH
T ss_pred hCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEEEecCCc-----cccchhHHHHHHHHHHH
Confidence 3467 774 6877 7999999999999999999999999999999998743 22345668999999999
Q ss_pred cCCCCCCcceeecC
Q 018076 348 VVHNVDGFEQLSIQ 361 (361)
Q Consensus 348 Agl~~~dId~ie~~ 361 (361)
|||+|+||||||+|
T Consensus 309 Agl~~~dId~ie~h 322 (401)
T 1ulq_A 309 AGLSFSDLGLIELN 322 (401)
T ss_dssp TTCCGGGCSEEEEC
T ss_pred cCCCHHHcCEEEEe
Confidence 99999999999997
|
| >2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=213.26 Aligned_cols=196 Identities=20% Similarity=0.320 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..+|+++++++||++||+++.+++ +|++|+..++.. ..+.++.+++..||
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id-----~vi~g~~~~~~~-------------------------~~~~~a~~va~~lG 104 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG-----DIVVGTVLAPGS-------------------------QRASECRMAAFYAG 104 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----CEEEECCSSBHH-------------------------HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCccC-------------------------CCChHHHHHHHHcC
Confidence 357899999999999999988776 799998543221 12456788999999
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCC-hH-------------HHHHHh--hc--------
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSID-AL-------------SMAGFC--KS-------- 262 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~-~~-------------~~~~~~--~~-------- 262 (361)
+ ++|+++|+++|+|++.||..|+++|++|++|++||+|+|.... |. .+..+. .+
T Consensus 105 l~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~mg~~A~~~~ 184 (442)
T 2wu9_A 105 FPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLLPMGVTSENVA 184 (442)
T ss_dssp CCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTSCHHHHHHHHH
T ss_pred CCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchhHHHHHHHHHH
Confidence 9 7999999999999999999999999999999999999986332 11 000000 00
Q ss_pred ---------------------------ccccccC--------C----------CCCCC------------CCcC-CCCCC
Q 018076 263 ---------------------------RALTTKY--------N----------GTPQE------------ASRP-FDCGR 284 (361)
Q Consensus 263 ---------------------------~~ls~~~--------~----------~~~~~------------~~~p-fd~~~ 284 (361)
+.+.... . .+.++ .++| ||.
T Consensus 185 ~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~~~rpvfd~-- 262 (442)
T 2wu9_A 185 QRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKK-- 262 (442)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHHTSCCSSCT--
T ss_pred HHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHhcCCCccCC--
Confidence 1111000 0 00011 3456 774
Q ss_pred Cccc-------ccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcce
Q 018076 285 DGFV-------IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQ 357 (361)
Q Consensus 285 ~G~v-------~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ 357 (361)
+|++ ++|||+++||++++.|+++|.+|+++|+|++.+++. |+..+.+...++++||++|||+++||||
T Consensus 263 ~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~~~~~~-----p~~~~~~~~~A~~~Al~~AGl~~~DId~ 337 (442)
T 2wu9_A 263 DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVD-----PAIMGIGPAVAIPAAVKAAGLELDDIDL 337 (442)
T ss_dssp TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEECC-----GGGGGGHHHHHHHHHHHHTTCCGGGCCE
T ss_pred CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEEEecCC-----chhcchHHHHHHHHHHHHcCCCHHHCCE
Confidence 6887 699999999999999999999999999999998873 3444567789999999999999999999
Q ss_pred eecC
Q 018076 358 LSIQ 361 (361)
Q Consensus 358 ie~~ 361 (361)
||+|
T Consensus 338 iE~h 341 (442)
T 2wu9_A 338 FEIN 341 (442)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9997
|
| >3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=207.02 Aligned_cols=198 Identities=20% Similarity=0.227 Sum_probs=148.9
Q ss_pred HHHHHHHHHHHHHHHC-CCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 129 FIAYALCAADEALHDA-KWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dA-g~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
..+|+++++++||+++ |+++++++ ++++|+..+.. . ....++.+++..+
T Consensus 27 ~~~L~~~a~~~Al~~a~gi~~~~Id-----~v~~g~~~~~~----------------------~---~~~~~a~~~~~~~ 76 (387)
T 3goa_A 27 AEDLSAHLMRSLLARNPSLTAATLD-----DIYWGCVQQTL----------------------E---QGFNIARNAALLA 76 (387)
T ss_dssp HHHHHHHHHHHHHHHCTTSCGGGCC-----EEEEECSCCSB----------------------T---TTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcC-----EEEEEcccCCc----------------------c---cccHHHHHHHHHc
Confidence 4679999999999999 99999888 89999854321 0 0123566888999
Q ss_pred CC--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH-----------------------------
Q 018076 208 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM----------------------------- 256 (361)
Q Consensus 208 gl--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~----------------------------- 256 (361)
|+ .+|+++|+++|+|++.||.+|+++|++|++|++||+|+|........
T Consensus 77 Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~ 156 (387)
T 3goa_A 77 EIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLSR 156 (387)
T ss_dssp TCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCCHHHHHHHHH
T ss_pred CCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccHHHHHHHHHH
Confidence 98 58999999999999999999999999999999999999864322110
Q ss_pred ---------HHHh---h--------cccccccC-------------CCCCCCCCc------------C-CCC------CC
Q 018076 257 ---------AGFC---K--------SRALTTKY-------------NGTPQEASR------------P-FDC------GR 284 (361)
Q Consensus 257 ---------~~~~---~--------~~~ls~~~-------------~~~~~~~~~------------p-fd~------~~ 284 (361)
..|. + .+.+.... ..++++.+| | |+. ..
T Consensus 157 ~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~~~~g~~t~~ 236 (387)
T 3goa_A 157 LHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFDPVSGTVTAG 236 (387)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSCTTTCCCCGG
T ss_pred HhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCcccCCCCceecc
Confidence 0000 0 00000000 001222333 2 554 25
Q ss_pred CcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 285 ~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
|+..++||++++||+++++|+++|.+++++|+|++.++++. ++.+.+...+++++|++|||+|+||||||+|
T Consensus 237 ~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~~-----~~~~~~~~~a~~~al~~agl~~~did~ve~h 308 (387)
T 3goa_A 237 TSSALSDGAAAMLVMSESRARELGLKPRARIRSMAVVGCDP-----SIMGYGPVPASKLALKKAGLSASDIDVFEMN 308 (387)
T ss_dssp GBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCT-----TSTTCTHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred cCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEEEcCCCC-----CcchHHHHHHHHHHHHHcCCCHHHcCEEEEe
Confidence 67779999999999999999999999999999999998753 3334455899999999999999999999987
|
| >4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-24 Score=204.86 Aligned_cols=197 Identities=23% Similarity=0.386 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+++++++||+++|+++++++ ++++|+..+.. .....+.+++..+|
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId-----~vi~g~~~~~~--------------------------~~~~~a~~v~~~lG 79 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID-----ESLLGGVLTAG--------------------------LGQNIARQIALGAG 79 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSCCTT--------------------------SCSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeecCCC--------------------------CCchHHHHHHHHcC
Confidence 357999999999999999999888 99999854221 11235678999999
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH---------------------HH-------
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM---------------------AG------- 258 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~---------------------~~------- 258 (361)
+ .+|+++|+++|+|++.||..|+++|++|.+|.+||+|+|........ .+
T Consensus 80 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (396)
T 4dd5_A 80 IPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNN 159 (396)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHHHHTSEETTTT
T ss_pred CCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhhhccccccccc
Confidence 9 58999999999999999999999999999999999999864331100 00
Q ss_pred -----------------------H---hh--------ccccccc---------C---CCCCCCCCc------------C-
Q 018076 259 -----------------------F---CK--------SRALTTK---------Y---NGTPQEASR------------P- 279 (361)
Q Consensus 259 -----------------------~---~~--------~~~ls~~---------~---~~~~~~~~~------------p- 279 (361)
+ .+ .+.+... . ..+++...| |
T Consensus 160 ~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~~v 239 (396)
T 4dd5_A 160 YHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTTMEKLAKLRPA 239 (396)
T ss_dssp EEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCCHHHHHHCCBS
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCCHHHHhhCCCc
Confidence 0 00 0000000 0 001222222 2
Q ss_pred CCC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCC
Q 018076 280 FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDG 354 (361)
Q Consensus 280 fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~d 354 (361)
|+. ..|+..++|||+++||++++.|+++|.+++++|.|++.+++ .|++.+.++..+++++|+++||+|+|
T Consensus 240 ~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~d 314 (396)
T 4dd5_A 240 FKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYGTAGV-----DPKIMGYGPVPATKKALEAANMTIED 314 (396)
T ss_dssp SSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGG
T ss_pred cCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEEEecC-----CCCcccHHHHHHHHHHHHHcCCCHHH
Confidence 432 25677789999999999999999999999999999999875 34555667799999999999999999
Q ss_pred cceeecC
Q 018076 355 FEQLSIQ 361 (361)
Q Consensus 355 Id~ie~~ 361 (361)
|||||+|
T Consensus 315 Id~ve~~ 321 (396)
T 4dd5_A 315 IDLVEAN 321 (396)
T ss_dssp CSEEEEC
T ss_pred cCEEEec
Confidence 9999986
|
| >3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=206.54 Aligned_cols=197 Identities=25% Similarity=0.335 Sum_probs=149.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+++++++||+++|+++++++ ++++|+..... .....+.+++..+|
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id-----~v~~g~~~~~~--------------------------~~~~~a~~i~~~lG 77 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD-----EVILGHCIQRT--------------------------DEANTARTAALAAG 77 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCCG--------------------------GGCSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC-----EEEEEEccCCC--------------------------ccchHHHHHHHHcC
Confidence 357999999999999999999888 89999854221 11235678899999
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHH--------------------HH--------
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSM--------------------AG-------- 258 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~--------------------~~-------- 258 (361)
+ ++|+++|+++|+|++.||..|+++|++|.+|++||+|+|........ ..
T Consensus 78 l~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (394)
T 3ss6_A 78 FPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVWEVLEDPIHHI 157 (394)
T ss_dssp CCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHHHHTBCTTTCC
T ss_pred CCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccccccccccccc
Confidence 9 58999999999999999999999999999999999999863321100 00
Q ss_pred ---------Hh----------------hc--------ccccc---------c---CCCCCCCCCcC-------------C
Q 018076 259 ---------FC----------------KS--------RALTT---------K---YNGTPQEASRP-------------F 280 (361)
Q Consensus 259 ---------~~----------------~~--------~~ls~---------~---~~~~~~~~~~p-------------f 280 (361)
.. +. |.+.. + ...+|++.+|+ |
T Consensus 158 ~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~e~~~~~~pvf 237 (394)
T 3ss6_A 158 MMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITAEKLAGLKPAF 237 (394)
T ss_dssp BHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCHHHHHTCCBSS
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCHHHHhhCCCcc
Confidence 00 00 00000 0 00123344443 5
Q ss_pred CC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 018076 281 DC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGF 355 (361)
Q Consensus 281 d~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dI 355 (361)
+. ..|+..++||++++||++++.|+++|.+++++|.|++.++. .|++.+.+...+++++|+++|++|+||
T Consensus 238 ~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~~~~-----~p~~~~~~~~~a~~~al~~agl~~~dI 312 (394)
T 3ss6_A 238 RKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSVAGV-----DPKIMGIGPAPAIRKGLEKVDWSLEDA 312 (394)
T ss_dssp STTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGC
T ss_pred CCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEEecC-----CCccchHHHHHHHHHHHHHcCCCHHHc
Confidence 53 25777789999999999999999999999999999999863 344456667999999999999999999
Q ss_pred ceeecC
Q 018076 356 EQLSIQ 361 (361)
Q Consensus 356 d~ie~~ 361 (361)
||||+|
T Consensus 313 d~ve~~ 318 (394)
T 3ss6_A 313 DLLEIN 318 (394)
T ss_dssp SEEEEC
T ss_pred CEEEeC
Confidence 999986
|
| >4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=201.22 Aligned_cols=197 Identities=23% Similarity=0.348 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+++++++||+++|+++++++ ++++|+..... ....++.+++..+|
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id-----~v~~g~~~~~~--------------------------~~~~~a~~~~~~lG 77 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID-----EVIIGNVLQTG--------------------------LGQNVARQIAINAG 77 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC-----EEEEECCCCSS--------------------------TTCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CcchHHHHHHHHcC
Confidence 357999999999999999999888 99999743211 11235678999999
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHH-----------------------------
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMA----------------------------- 257 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~----------------------------- 257 (361)
+ ++|+++|+++|+|++.||..|+++|++|.+|++||+|+|.........
T Consensus 78 l~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (395)
T 4e1l_A 78 IPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSMLTDGLIDAFNQ 157 (395)
T ss_dssp CCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------CCTTEEEETTH
T ss_pred CCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhccccccccccc
Confidence 9 689999999999999999999999999999999999998744422110
Q ss_pred -HH--------hh----------------c--------ccccc---------cC----CCCCCCCCcC------------
Q 018076 258 -GF--------CK----------------S--------RALTT---------KY----NGTPQEASRP------------ 279 (361)
Q Consensus 258 -~~--------~~----------------~--------~~ls~---------~~----~~~~~~~~~p------------ 279 (361)
.| .. . +.+.. +. ..++++..|+
T Consensus 158 ~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~t~e~l~~~~~ 237 (395)
T 4e1l_A 158 YHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGMTFEGLSKLKP 237 (395)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTCCHHHHHHCCB
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCCCHHHHhhCCC
Confidence 00 00 0 00000 00 0012233332
Q ss_pred -CCC-----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCC
Q 018076 280 -FDC-----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 280 -fd~-----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~ 353 (361)
|+. ..|+..++||++++||++++.|+++|.+++++|.|++.+++ .|++.+.++..+++++|+++||+|+
T Consensus 238 v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~~~~-----~p~~~~~~~~~ai~~al~~agl~~~ 312 (395)
T 4e1l_A 238 AFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYASAGV-----EPEVMGTGPIPATRKALKKAGLSIN 312 (395)
T ss_dssp SSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEEEEC-----CGGGTTCTHHHHHHHHHHHTTCCGG
T ss_pred ccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEEccC-----CCCcchHHHHHHHHHHHHHcCCCHH
Confidence 432 24677789999999999999999999999999999999875 3444455568999999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
||||||+|
T Consensus 313 dId~ve~~ 320 (395)
T 4e1l_A 313 DIDLIEAN 320 (395)
T ss_dssp GCSEEEEC
T ss_pred HcCEEEec
Confidence 99999986
|
| >1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-24 Score=201.64 Aligned_cols=176 Identities=14% Similarity=0.168 Sum_probs=134.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
++..+|+++++++||+++|+++++++ +|++|+..+. +. .+ ..+.+++..
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~id-----~vi~~~~~~~---------------------~~----~~-~~a~~v~~~ 96 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEGVD-----AVIVATNTPD---------------------AL----FP-DTAALVQAR 96 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTTEE-----EEEEECSSCS---------------------EE----ES-CHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCC---------------------CC----CC-cHHHHHHHH
Confidence 34678999999999999999876665 7888875421 11 11 257889999
Q ss_pred cCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 207 YGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 207 lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
||+++|+++|+++|+|++.||..|+++|++|++|.+||+|+|. +++. ..|+| +++|
T Consensus 97 lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~~----------------------~~~~d-~~~~ 152 (322)
T 1ub7_A 97 FGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEA-LSKI----------------------IDWND-RATA 152 (322)
T ss_dssp TTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGT----------------------SCTTC-HHHH
T ss_pred hCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEech-hccc----------------------cChhh-cccc
Confidence 9999999999999999999999999999999999999999997 3321 12344 5679
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEE-EEEEeecCCCCCCC-----CCC---------Cc--------HHHHHHHHH
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHITQ-----PHI---------DG--------KGAILAMTR 343 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~~-----p~~---------~g--------~~~~~a~~~ 343 (361)
+++||||+++||++.+. +.++++.+ .+.+...+..++.. |+. ++ ..+.++|++
T Consensus 153 ~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 228 (322)
T 1ub7_A 153 VLFGDGGGAAVVGKVRE----GYGFRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLE 228 (322)
T ss_dssp TTBCCEEEEEEEECCCT----TCEEEEEEEEECGGGCTTEEEESSCSBCTTSCBCCSSCEECHHHHHHHHHHHHHHHHHH
T ss_pred eeeccccEEEEEEecCC----CCceeEEEEEEecCCCCeEEeCCCCCCCCccccccceEEecCHHHHHHHHHHHHHHHHH
Confidence 99999999999998754 34566654 22333333322211 332 23 577899999
Q ss_pred HHHHcCCCCCCcceeecC
Q 018076 344 ALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 344 Al~~Agl~~~dId~ie~~ 361 (361)
+|+++|++++|||||+.|
T Consensus 229 al~~agl~~~did~~~~H 246 (322)
T 1ub7_A 229 AIEKAGLTPEDIRLFVPH 246 (322)
T ss_dssp HHHHHTCCGGGCSEEEEC
T ss_pred HHHHcCCCHHHCCEEEEc
Confidence 999999999999999986
|
| >1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-24 Score=201.02 Aligned_cols=175 Identities=15% Similarity=0.168 Sum_probs=133.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
++..+|+++++++||+++|+++++++ +|++|+..+.. .....+.+++..
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id-----~vi~g~~~~~~--------------------------~~~~~a~~v~~~ 97 (317)
T 1hnj_A 49 ETVSTMGFEAATRAIEMAGIEKDQIG-----LIVVATTSATH--------------------------AFPSAACQIQSM 97 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCSC--------------------------SSSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC--------------------------CCCcHHHHHHHH
Confidence 45688999999999999999887776 88999854210 012467889999
Q ss_pred cCCC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 207 lgl~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
||++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|. +++.. . |+.+.+
T Consensus 98 lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~~~----------------------~-~~d~~~ 153 (317)
T 1hnj_A 98 LGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDV-LARTC----------------------D-PTDRGT 153 (317)
T ss_dssp HTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-HHHHS----------------------C-TTCHHH
T ss_pred hCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEech-hcccC----------------------C-chhccc
Confidence 9998 899999999999999999999999999999999999996 22210 0 222345
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEE-EeecCCCCCCCC-----------CCCcH--------HHHHHHHHHH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGY-GMSGDAHHITQP-----------HIDGK--------GAILAMTRAL 345 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~-~~~~d~~~~~~p-----------~~~g~--------~~~~a~~~Al 345 (361)
|+++||||+++||++.+. ..+++.+.+. +...+..++..+ .+.++ .+.++|+++|
T Consensus 154 ~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~aL 228 (317)
T 1hnj_A 154 IIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETL 228 (317)
T ss_dssp HTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEECCCCCSSCTTSCCSCEECHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEEECCCCCCCCCCCceEEecCHHHHHHHHHHHHHHHHHHH
Confidence 899999999999998753 3577766542 222232222221 12354 6788999999
Q ss_pred HHcCCCCCCcceeecC
Q 018076 346 KQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 346 ~~Agl~~~dId~ie~~ 361 (361)
+++|++++|||||+.|
T Consensus 229 ~~agl~~~did~v~~H 244 (317)
T 1hnj_A 229 AANNLDRSQLDWLVPH 244 (317)
T ss_dssp HHTTCCGGGCCEEEEC
T ss_pred HHcCCCHHHCCEEEEc
Confidence 9999999999999986
|
| >2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.7e-24 Score=196.52 Aligned_cols=172 Identities=16% Similarity=0.189 Sum_probs=134.7
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
++..+|+++++++||+++|+++++++ +|++|+..+.. . .++ .+.+++..
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id-----~v~~~~~~~~~---------------------~----~~~-~a~~v~~~ 96 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELD-----LIILATLTPQK---------------------R----FPS-TACLVQAQ 96 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSCSS---------------------S----SSC-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------C----CCc-HHHHHHHH
Confidence 45688999999999999999888776 89999864321 1 122 67889999
Q ss_pred cCCCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 207 YGFQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 207 lgl~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
||+++ |+++++++|+|++.||..|+++|++|++|.+||+|+|. +++. .. |+.+.+
T Consensus 97 lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~-~s~~----------------------~~-~~~~~~ 152 (309)
T 2ebd_A 97 LKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEK-LSEA----------------------VD-WEDRST 152 (309)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE-GGGT----------------------CC-TTCTTT
T ss_pred hCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEecc-cccc----------------------cC-ccchhh
Confidence 99998 99999999999999999999999999999999999996 2211 11 234567
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC---CCCCC-----CCCcH--------HHHHHHHHHHHHcC
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQP-----HIDGK--------GAILAMTRALKQVV 349 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~p-----~~~g~--------~~~~a~~~Al~~Ag 349 (361)
|+++||||+++||++.+.+ ..+++.+ ..+++. +++.| .+.+. .+.++++++|+++|
T Consensus 153 ~~~~gdGaaA~vL~~~~~~----~~i~~~~----~~~~g~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~i~~al~~ag 224 (309)
T 2ebd_A 153 CVLFGDGAGAVVVTRSEDK----SDILATR----MYAEGSLEELLHADNCGYIRMKGRELFKVAVRSMEEVCREVLEKAG 224 (309)
T ss_dssp TTTBCEEEEEEEEEECSSS----CEEEEEE----EEECGGGGGGEEECTTCCEEECHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccEEEEEEecCCC----CceeEEE----EEecCCccceeEeCCCCeEEEccHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999987653 2344443 344442 34444 33454 67889999999999
Q ss_pred CCCCCcceeecC
Q 018076 350 HNVDGFEQLSIQ 361 (361)
Q Consensus 350 l~~~dId~ie~~ 361 (361)
++++|||||++|
T Consensus 225 l~~~did~~~~H 236 (309)
T 2ebd_A 225 VKPEEVSLVIPH 236 (309)
T ss_dssp CCGGGCSEEEEC
T ss_pred CCHHHCCEEEEc
Confidence 999999999987
|
| >3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-23 Score=198.39 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 129 FIAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 129 ~~~l~l~a~~~Al~d-Ag~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
...|+.+++++||++ +|+++++++ ++++|+..... .....++.+++..+
T Consensus 32 ~~~L~~~A~~~AL~~~AGl~~~dId-----~vi~g~~~~~~-------------------------~~~~~~a~~va~~l 81 (407)
T 3svk_A 32 PLNLVVGLVDELRRRYPDLDETLIS-----DMILGVVSPVG-------------------------DQGGDIARTAVLAA 81 (407)
T ss_dssp HHHHHHHHHHHHHHHSTTCCGGGEE-----EEEEECC---------------------------------CHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhhcCcCHHHCC-----EEEEEecCccc-------------------------cccCcHHHHHHHHc
Confidence 367999999999999 999988887 89999743210 00123567899999
Q ss_pred CC--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHH--------------------HHHH------
Q 018076 208 GF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALS--------------------MAGF------ 259 (361)
Q Consensus 208 gl--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~--------------------~~~~------ 259 (361)
|+ .+|+++|+++|+|++.||..|+++|++|++|++||+|+|....... ..++
T Consensus 82 Glp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~~g~~Ae~~a 161 (407)
T 3svk_A 82 GLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVPQGIGADLIA 161 (407)
T ss_dssp TCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHHHHHHHHHHH
T ss_pred CCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccCHHHHHHHHH
Confidence 99 6799999999999999999999999999999999999987433110 0000
Q ss_pred ----------hhccccc---------c-cC--------------CCCCCCCCcC-------------CCCC---------
Q 018076 260 ----------CKSRALT---------T-KY--------------NGTPQEASRP-------------FDCG--------- 283 (361)
Q Consensus 260 ----------~~~~~ls---------~-~~--------------~~~~~~~~~p-------------fd~~--------- 283 (361)
......+ . .+ ..+|+...|+ |+..
T Consensus 162 ~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~g~v~~~~~~ 241 (407)
T 3svk_A 162 TLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGVGEMGGFDDV 241 (407)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC-----------
T ss_pred HHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCCCcccccccc
Confidence 0000000 0 00 0123333332 4422
Q ss_pred -----------------CCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHH
Q 018076 284 -----------------RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALK 346 (361)
Q Consensus 284 -----------------~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~ 346 (361)
.|+..++|||+++||++++.|+++|.+++++|.|++.+++..+ ..+.+...+++++|+
T Consensus 242 ~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~~~~~~p~-----~~~~~~~~a~~~al~ 316 (407)
T 3svk_A 242 ALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATATSGSDPV-----IMLTGPTPATRKVLD 316 (407)
T ss_dssp --CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEEEC-----------CCCTHHHHHHHHHH
T ss_pred ccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEEEeccCCc-----cccHHHHHHHHHHHH
Confidence 4666799999999999999999999999999999999876432 223345889999999
Q ss_pred HcCCCCCCcceeecC
Q 018076 347 QVVHNVDGFEQLSIQ 361 (361)
Q Consensus 347 ~Agl~~~dId~ie~~ 361 (361)
+|||+++||||||+|
T Consensus 317 ~Agl~~~dId~~e~h 331 (407)
T 3svk_A 317 RAGLTIDDIDLFELN 331 (407)
T ss_dssp HHTCCGGGCSEEEEC
T ss_pred HcCCCHHHCCEEEEe
Confidence 999999999999997
|
| >1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-24 Score=201.60 Aligned_cols=175 Identities=19% Similarity=0.198 Sum_probs=131.4
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
++..+|+++++++||+++|+++++++ +|++|+..+.. . .++ .+.+++..
T Consensus 58 ~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~gt~~~~~---------------------~----~p~-~a~~v~~~ 106 (339)
T 1mzj_A 58 ETIQVMGVAASRRALEHAGVDPAEID-----LVVVSTMTNFV---------------------H----TPP-LSVAIAHE 106 (339)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC---------------------C----SSC-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC---------------------C----CCh-HHHHHHHH
Confidence 45678999999999999999988776 89999865321 0 112 56789999
Q ss_pred cCCC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 207 lgl~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
||++ +|+++|+++|+|++.||..|+++|++|.+|.+||+|+|. +++. +. ++...+
T Consensus 107 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~-~s~~----------~~-------------~~d~~~ 162 (339)
T 1mzj_A 107 LGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATER-MTDV----------ID-------------LADRSL 162 (339)
T ss_dssp HTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEE-GGGG----------SC-------------SSCTTT
T ss_pred hCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcc-cccc----------cC-------------cccccc
Confidence 9998 799999999999999999999999999999999999997 3332 01 122467
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEE-EEEEeecCCCCCC--CCCC-------------Cc--------HHHHHHH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEV-RGYGMSGDAHHIT--QPHI-------------DG--------KGAILAM 341 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i-~g~~~~~d~~~~~--~p~~-------------~g--------~~~~~a~ 341 (361)
|+++||||+++||++.+. .++++.. .+.+...+..+++ .|++ .+ +.+.++|
T Consensus 163 ~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~~~g~~p~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i 237 (339)
T 1mzj_A 163 SFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGTGLGSLHMSSSWDQYVEDPSVGRPALVMDGKRVFRWAVADVVPAA 237 (339)
T ss_dssp TTTBCEEEEEEEEEEESS-----CCBCCCEEEECGGGGGGEEESCCHHHHTTCSSSCSCCEEECHHHHHHHHHHHHHHHH
T ss_pred ceEeccCceEEEEEecCC-----CCeEEEEEEEcCCCCCeEEecCCCCCcccccccccceEEeeCHHHHHHHHHHHHHHH
Confidence 999999999999998653 3444432 2222222222221 1211 23 5678899
Q ss_pred HHHHHHcCCCCCCcceeecC
Q 018076 342 TRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 342 ~~Al~~Agl~~~dId~ie~~ 361 (361)
+++|+++|++++|||||..|
T Consensus 238 ~~aL~~agl~~~did~v~~H 257 (339)
T 1mzj_A 238 REALEVAGLTVGDLVAFVPH 257 (339)
T ss_dssp HHHHHTTTCCGGGCSEEEEC
T ss_pred HHHHHHcCCCHHHCCEEEEC
Confidence 99999999999999999986
|
| >3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} | Back alignment and structure |
|---|
Probab=99.88 E-value=7.3e-24 Score=225.34 Aligned_cols=189 Identities=10% Similarity=0.009 Sum_probs=142.0
Q ss_pred hcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHH
Q 018076 123 HRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGH 202 (361)
Q Consensus 123 ~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 202 (361)
.+.+.....|++.|+++||++||+++++++ .|+++++.+ +. ....+..
T Consensus 683 ~~~~~~~~~la~~Aa~~AL~~agl~~~dId-----~ii~~t~~~----------------------~~-----~p~~a~~ 730 (979)
T 3tsy_A 683 EIITAEVPKLGKEAALKALKEWGQPKSKIT-----HLVFCTTSG----------------------VE-----MPGADYK 730 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------CC-----SSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEeeCC----------------------CC-----CCcHHHH
Confidence 333444667999999999999999988887 788887322 11 1246778
Q ss_pred HHHHcCCCCCc---cccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcC
Q 018076 203 VSMKYGFQGPN---HAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRP 279 (361)
Q Consensus 203 is~~lgl~G~~---~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~p 279 (361)
|+..||++++. +.++++|++++.||..|.++|++|.++.|||+|+|.....+ .......
T Consensus 731 v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~------------------~~~~~~~ 792 (979)
T 3tsy_A 731 LANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF------------------RGPSEDA 792 (979)
T ss_dssp HHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC------------------CCCCSSC
T ss_pred HHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe------------------eCCCccC
Confidence 99999998755 89999999999999999999999999999999999621110 0011111
Q ss_pred CCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCc----------------HHHHHHHHH
Q 018076 280 FDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDG----------------KGAILAMTR 343 (361)
Q Consensus 280 fd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g----------------~~~~~a~~~ 343 (361)
++...+++++||||+|+||++.+.+..++..++....+.....+..+...+.+.. +.+.+++++
T Consensus 793 ~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 872 (979)
T 3tsy_A 793 LDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQ 872 (979)
T ss_dssp HHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecCchhheEEEEecCceEEEEchHHHHHHHHHHHHHHHH
Confidence 2222346899999999999998877667777877777777766655543322211 336889999
Q ss_pred HHHHcCCCCCCcceeecC
Q 018076 344 ALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 344 Al~~Agl~~~dId~ie~~ 361 (361)
+|+++|++++|||||.+|
T Consensus 873 al~~agl~~~did~~~~H 890 (979)
T 3tsy_A 873 AFDPLGISDWNSLFWIAH 890 (979)
T ss_dssp HHGGGTCCCGGGSEEEEC
T ss_pred HHhhcCCCCcccceEEEC
Confidence 999999999999999887
|
| >1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-23 Score=200.72 Aligned_cols=242 Identities=13% Similarity=0.112 Sum_probs=159.7
Q ss_pred eEEEeeceeCCCCC-CHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-C
Q 018076 41 VVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW-L 118 (361)
Q Consensus 41 v~ItG~g~~~p~g~-~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~-~ 118 (361)
+.|+|+|+.+|... +.+++|+.+.... .+.+..+|...-+. ..+...+. ...+ ...|+ ..+ +
T Consensus 10 ~~I~gig~~~P~~~v~~~~l~~~~~~~~---~~~~~~~~~~~i~~-------~~GI~~R~--~~~~---~~~~~-~~~~~ 73 (382)
T 1u0m_A 10 ATLCRPSVSVPEHVITMEETLELARRRH---TDHPQLPLALRLIE-------NTGVRTRH--IVQP---IEDTL-EHPGF 73 (382)
T ss_dssp CEECCCEEECCSEEEEHHHHHHHHHHHH---TTCTTHHHHHHHHH-------HTCCCEEE--ESSC---HHHHT-SCCCH
T ss_pred eEEEEEEEeCCCcccCHHHHHHHHHHhc---cChhhHHHHHHHHH-------hcCCCcce--eecC---hhhhc-cCCCh
Confidence 79999999999874 7899998875431 11111111000000 01111111 1100 00122 111 2
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
+++.....++...|+++|+++||+++|+++++++ .|++++..+ +. . ..
T Consensus 74 ~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~id-----~vi~~t~~~----------------------~~----~-p~ 121 (382)
T 1u0m_A 74 EDRNKVYEREAKSRVPAVIQRALDDAELLATDID-----VIIYVSCTG----------------------FM----M-PS 121 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSS----------------------CC----S-SC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC-----EEEEEecCC----------------------CC----C-Cc
Confidence 3333333456689999999999999999888776 788887432 11 1 13
Q ss_pred HHHHHHHHcCCCC--Ccccc-ccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCC
Q 018076 199 ASGHVSMKYGFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQE 275 (361)
Q Consensus 199 ~a~~is~~lgl~G--~~~~v-~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~ 275 (361)
.+.+|+..||+++ ++++| +++|+|++.||..|+++|++|.+|.+||+|+|. .++.
T Consensus 122 ~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~-~s~~--------------------- 179 (382)
T 1u0m_A 122 LTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEF-CSLC--------------------- 179 (382)
T ss_dssp HHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE-GGGG---------------------
T ss_pred HHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEec-cchh---------------------
Confidence 5678999999998 88999 899999999999999999999999999999986 2221
Q ss_pred CCcCCCCCCC----cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEe--ecCCCC------------C----CCCCCC
Q 018076 276 ASRPFDCGRD----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHH------------I----TQPHID 333 (361)
Q Consensus 276 ~~~pfd~~~~----G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~--~~d~~~------------~----~~p~~~ 333 (361)
.+|+|.+++ ++++||||+++||++.++ ++. +|.+... ..++.+ + ..+...
T Consensus 180 -~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~---~g~----~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 251 (382)
T 1u0m_A 180 -YQPTDLGVGSLLCNGLFGDGIAAAVVRGRGG---TGV----RLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATM 251 (382)
T ss_dssp -CCTTCCSHHHHHHHHHBCEEEEEEEEETTTC---SEE----EEEEEEEEECSSCTTTEEEEEETTEEEEEECTTTGGGH
T ss_pred -cCcccCCHHHhhccchhcCCcEEEEEeccCC---CCc----EEEEeeeEecCChHHhcCceecCCceEEEeCcHHHHHH
Confidence 234454433 899999999999997653 332 4555443 333321 1 112223
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 334 GKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 334 g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
...+. +++++|+++|++++|||||.+|
T Consensus 252 ~~~~~-~i~~aL~~agl~~~dId~v~~H 278 (382)
T 1u0m_A 252 EPLAP-ALKELAGEHGWDASDLDFYIVH 278 (382)
T ss_dssp HHHHH-HHHHHHHTTSCCSSCCSCCEEE
T ss_pred HHHHH-HHHHHHHHcCCCHHHCCEEEEC
Confidence 46677 9999999999999999999876
|
| >1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-23 Score=194.78 Aligned_cols=175 Identities=18% Similarity=0.246 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
+..+|+++++++||+++|+++++++ +|++|+..++. .. + ..+.+++..+
T Consensus 50 ~~~~l~~~a~~~al~~ag~~~~~id-----~vi~~~~~~~~---------------------~~----~-~~a~~v~~~l 98 (313)
T 1zow_A 50 DTSDLAYEASVKAIADAGIQPEDID-----MIIVATATGDM---------------------PF----P-TVANMLQERL 98 (313)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC---------------------SS----S-CHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------CC----C-cHHHHHHHHh
Confidence 4578999999999999999887776 89999864321 11 1 2467899999
Q ss_pred CCC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 208 GFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 208 gl~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
|++ +|+++|+++|+|++.||..|+++|++|++|.+||+|+|. +++ ..+|+| ..+|
T Consensus 99 gl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~-~s~----------------------~~~~~d-~~~~ 154 (313)
T 1zow_A 99 GTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADK-LSK----------------------ITDLTD-RSTA 154 (313)
T ss_dssp TCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEE-GGG----------------------TCCTTC-HHHH
T ss_pred CCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcc-ccc----------------------ccCccc-ccce
Confidence 998 699999999999999999999999999999999999996 211 123444 2369
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEE-EEEEEeecCCCCCCCC----CCCc--------HHHHHHHHHHHHHcCCCCC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAE-VRGYGMSGDAHHITQP----HIDG--------KGAILAMTRALKQVVHNVD 353 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~-i~g~~~~~d~~~~~~p----~~~g--------~~~~~a~~~Al~~Agl~~~ 353 (361)
+++||||+++||++.++ +.++++. +.+.+...+..++..| ...+ +.+.++++++|+++|++++
T Consensus 155 ~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~ 230 (313)
T 1zow_A 155 VLFGDGAGAVIIGEVSE----GRGIISYEMGSDGTGGKHLYLDKDTGKLKMNGREVFKFAVRIMGDASTRVVEKANLTSD 230 (313)
T ss_dssp TTBCEEEEEEEEEECST----TCEEEEEEEEECGGGGGGEEECTTTCCEEECHHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred eeeccceEEEEEEecCC----CCceeEEEEEEcCCCcCeEEecCCCCeeEeccHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 99999999999998764 2345443 2222222222222211 1123 3678899999999999999
Q ss_pred CcceeecC
Q 018076 354 GFEQLSIQ 361 (361)
Q Consensus 354 dId~ie~~ 361 (361)
|||||++|
T Consensus 231 did~~~~H 238 (313)
T 1zow_A 231 DIDLFIPH 238 (313)
T ss_dssp GCSEEEEC
T ss_pred HCCEEEEc
Confidence 99999986
|
| >2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-22 Score=190.85 Aligned_cols=251 Identities=14% Similarity=0.101 Sum_probs=164.3
Q ss_pred CceEEEeeceeCCCCC-CHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~-~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.++.|+|+|+.+|... +.+++|+.+....+. ..+..+|...-+. ..+...+. ...+ ...||+..|
T Consensus 12 ~~v~I~g~g~~~P~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~i~~-------~~Gi~~R~--~~~~---~~~~~~~~~ 77 (374)
T 2h84_A 12 NNSFVLGIGISVPGEPISQQSLKDSISNDFSD--KAETNEKVKRIFE-------QSQIKTRH--LVRD---YTKPENSIK 77 (374)
T ss_dssp CCCEEEEEEEECSSSCEEHHHHHHHHHHHSCS--CHHHHHHHHHHHH-------TTCCCEEC--CSSC---TTSGGGCGG
T ss_pred CCeEEEEEEEeCCCcccCHHHHHHHHHHhhcc--ChHHHHHHHHHHH-------hCCcCcce--eecC---ccccccccc
Confidence 3589999999999975 789999987542210 0000011000000 00111110 0000 012555444
Q ss_pred -CCchhhccc-----CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcch
Q 018076 118 -LNSKDHRSI-----ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFI 191 (361)
Q Consensus 118 -~~~~~~~~~-----~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (361)
.++.+...+ ++...|+++|+++||+++|+++++++ .|++++..+ +.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id-----~vi~~t~~~----------------------~~- 129 (374)
T 2h84_A 78 FRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT-----HIVSVTSTG----------------------II- 129 (374)
T ss_dssp GGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSC----------------------CC-
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC----------------------CC-
Confidence 344444444 77889999999999999999988877 888887532 11
Q ss_pred hhhhhhHHHHHHHHHcCCCC--Cccccc-cchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhccccccc
Q 018076 192 PRILINMASGHVSMKYGFQG--PNHAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK 268 (361)
Q Consensus 192 ~~~~~~~~a~~is~~lgl~G--~~~~v~-~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~ 268 (361)
. ...+.+|+..||+++ +++.|. ++|+|++.||..|+++|++|.++.+||+|+|.. ++..
T Consensus 130 ---~-p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~-s~~~------------- 191 (374)
T 2h84_A 130 ---I-PDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVC-SLHF------------- 191 (374)
T ss_dssp ---S-SCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECC-GGGC-------------
T ss_pred ---C-CcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEec-chhh-------------
Confidence 1 125678999999998 789996 899999999999999999999999999999972 2110
Q ss_pred CCCCCCCCCcCCCCC--CCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeec--CCC------------CC----C
Q 018076 269 YNGTPQEASRPFDCG--RDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG--DAH------------HI----T 328 (361)
Q Consensus 269 ~~~~~~~~~~pfd~~--~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~--d~~------------~~----~ 328 (361)
..|.|.+ .+++++||||+++||++.+.+..+ .++ +|.+.+... ++. ++ .
T Consensus 192 --------~~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~ 260 (374)
T 2h84_A 192 --------SNTDGGDQMVASSIFADGSAAYIIGCNPRIEET--PLY-EVMCSINRSFPNTENAMVWDLEKEGWNLGLDAS 260 (374)
T ss_dssp --------CCSSSHHHHHHHHHBCCEEEEEEEESSCCTTCC--CCE-EEEEEEEEECSSCTTSEEEEEETTEEEEEECTT
T ss_pred --------cCCCCHHHHhhhhhhccCcEEEEEecCCCcccC--Cce-eEEeeeeEEeCCCcccceeEEecCcEEEEeCch
Confidence 0122211 148999999999999988765322 244 677665431 111 00 0
Q ss_pred CCCCCcHHHHHHHHHHHHHcC------CCCCCcceeecC
Q 018076 329 QPHIDGKGAILAMTRALKQVV------HNVDGFEQLSIQ 361 (361)
Q Consensus 329 ~p~~~g~~~~~a~~~Al~~Ag------l~~~dId~ie~~ 361 (361)
.|....+.+.++++++|+++| ++++||||| +|
T Consensus 261 v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H 298 (374)
T 2h84_A 261 IPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IH 298 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-EC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-EC
Confidence 011113567889999999999 999999999 87
|
| >2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-22 Score=187.41 Aligned_cols=172 Identities=19% Similarity=0.226 Sum_probs=130.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
++..+|+++|+++||+++|+ ++++ .|++++..+. +.. + ..+.+++..
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~id-----~vi~~t~~~~---------------------~~~----p-~~a~~v~~~ 97 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERVD-----AVVLATSTGD---------------------FCC----P-ATAPRVAAR 97 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCCS-----EEEEECSSCS---------------------EEE----S-CSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccCC-----EEEEEeCCCC---------------------CCC----C-hHHHHHHHH
Confidence 45788999999999999999 5665 8888875431 111 1 256789999
Q ss_pred cCCC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 207 lgl~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
||++ +|+++|+++|+|++.||..|+++|++|.+|.+||+|+|. +++.. . ++...+
T Consensus 98 lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~-~s~~~----------~-------------~~d~~~ 153 (331)
T 2x3e_A 98 LGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDT-FSHTL----------D-------------PADRST 153 (331)
T ss_dssp TTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGGS----------C-------------TTCHHH
T ss_pred hCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeec-cccCC----------C-------------cccccc
Confidence 9998 899999999999999999999999999999999999997 33221 0 122346
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC---CCCCCC----------------CCc--------HHHH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH---HITQPH----------------IDG--------KGAI 338 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~---~~~~p~----------------~~g--------~~~~ 338 (361)
|+++||||+++||++.++| ++.++++. ...+++. ++..|. ..+ +.+.
T Consensus 154 ~~~~GdGA~A~vL~~~~~a--~~~~i~~~----~~~~dg~~~~~~~~p~~~~~~p~~~~~~~~~~~~g~~v~~~~~~~~~ 227 (331)
T 2x3e_A 154 RALFGDGAGAVVLRAGDAE--EEGALLAF----DLGSDGHQFDLLMTPAVSRAERSSGQASNYFRMDGKAVFGQAVTQMS 227 (331)
T ss_dssp HHHBCCEEEEEEEEEECTT--STTBEEEE----EEEECGGGTTSEEEECCCHHHHHHTCCCCCCEECHHHHHHHHHHHHH
T ss_pred ceeeccccEEEEEEecCCC--CCCceEEE----EEEEcCCCCCeEEecCCCCCCCCccCcCceEEecCHHHHHHHHHHHH
Confidence 8999999999999987755 34455543 3333432 223232 123 5678
Q ss_pred HHHHHHHHHcCCCCCCcceeecC
Q 018076 339 LAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 339 ~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
++++++|+++|++++|||||.+|
T Consensus 228 ~~i~~aL~~agl~~~did~~~~H 250 (331)
T 2x3e_A 228 DSVRRVLDRVGWQASDLHHLVPH 250 (331)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHcCCCHHHCCEEEEc
Confidence 89999999999999999999876
|
| >1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-22 Score=189.97 Aligned_cols=175 Identities=22% Similarity=0.233 Sum_probs=129.8
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHH
Q 018076 127 ARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMK 206 (361)
Q Consensus 127 ~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 206 (361)
.+..+|+++|+++||+++|+++++++ +|++|+..+.. .. ...+.+++..
T Consensus 59 ~~~~~la~~A~~~al~~ag~~~~~id-----~vi~~t~~~~~---------------------~~-----~~~a~~v~~~ 107 (335)
T 1u6e_A 59 ESAASMATEACRRALSNAGLSAADID-----GVIVTTNTHFL---------------------QT-----PPAAPMVAAS 107 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC---------------------SS-----SCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEcCCCCC---------------------CC-----ChHHHHHHHH
Confidence 34678999999999999999988776 89999864321 11 1356789999
Q ss_pred cCCC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 207 YGFQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 207 lgl~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
||++ +|+++|+++|+|++.||..|+++|++|.+|.+||+|+|.. ++ ...|+| ..+
T Consensus 108 lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~-s~----------------------~~~~~d-~~~ 163 (335)
T 1u6e_A 108 LGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKL-SP----------------------TIDMYD-RGN 163 (335)
T ss_dssp HTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEEC-GG----------------------GCCTTC-TTT
T ss_pred hCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccc-cc----------------------ccCccc-ccc
Confidence 9998 5999999999999999999999999999999999999972 11 123444 357
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEE-EeecCCCCCC--------CC-------CCCc--------HHHHHHH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGY-GMSGDAHHIT--------QP-------HIDG--------KGAILAM 341 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~-~~~~d~~~~~--------~p-------~~~g--------~~~~~a~ 341 (361)
++++||||+++||++.+. ++ ++..+.+. +...+..+.. .| ...+ ..+.+++
T Consensus 164 ~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i 238 (335)
T 1u6e_A 164 CFIFADGAAAVVVGETPF---QG--IGPTVAGSDGEQADAIRQDIDWITFAQNPSGPRPFVRLEGPAVFRWAAFKMGDVG 238 (335)
T ss_dssp TTTBCEEEEEEEEEECSS---CC--BCCCEEEECGGGGGGEEESSCHHHHHTSTTSCCCCEEECHHHHHHHHHHHHHHHH
T ss_pred ceEeccccEEEEEEecCC---CC--eeEEEEEEcCCcccceeecCCccCcCCCccCccceEEEcCHHHHHHHHHHHHHHH
Confidence 999999999999998654 22 33333332 2111111110 00 1122 3667899
Q ss_pred HHHHHHcCCCCCCcceeecC
Q 018076 342 TRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 342 ~~Al~~Agl~~~dId~ie~~ 361 (361)
+++|+++|++++|||||++|
T Consensus 239 ~~al~~agl~~~dId~~~~H 258 (335)
T 1u6e_A 239 RRAMDAAGVRPDQIDVFVPH 258 (335)
T ss_dssp HHHHHHHTCCGGGCCEEEEC
T ss_pred HHHHHHcCCCHHHCCEEEEC
Confidence 99999999999999999987
|
| >3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=177.64 Aligned_cols=188 Identities=18% Similarity=0.162 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .|++++...+. . ....+.+|+..||
T Consensus 68 ~~~La~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~~---------------------~-----~p~~a~~v~~~lG 116 (345)
T 3s21_A 68 ASDAATQAARKALIDANIGIEKIG-----LLINTSVSRDY---------------------L-----EPSTASIVSGNLG 116 (345)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEECCSCCSC---------------------S-----SSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC---------------------C-----CChHHHHHHHHhC
Confidence 468999999999999999988887 88988743211 1 1134678999999
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
+. .+++.|+.+|+|++.||..|.++|++|.++.+||+|+|.. +......+ .+.++ +...++||+....+
T Consensus 117 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~~~~~~~--~~~~~------~~~~~~~f~~~~~~ 187 (345)
T 3s21_A 117 VSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETA-NLVYEKTL--ERMTS------PDVTEEEFRNELAA 187 (345)
T ss_dssp CCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC-HHHHHHHH--HHHTC------TTCCHHHHHHHHGG
T ss_pred CCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccc-chhhcccc--ccccC------Cccchhhhhhhccc
Confidence 95 6999999999999999999999999999999999999973 33321221 12222 33467788888889
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC--CCCC-----CCCcH--------HHHHHHHHHHHHcCCC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--ITQP-----HIDGK--------GAILAMTRALKQVVHN 351 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--~~~p-----~~~g~--------~~~~a~~~Al~~Agl~ 351 (361)
+++||||+++||++.+... .+. .|.+....+++.+ ...+ ..+++ .+.++++++|+++|++
T Consensus 188 ~~~GdGA~A~vl~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~ 262 (345)
T 3s21_A 188 LTLGCGAAAMVMARSELVP-DAP----RYKGGVTRSATEWNKLCRGNLDRMVTDTRLLLIEGIKLAQKTFVAAKQVLGWA 262 (345)
T ss_dssp GGBCCEEEEEEEEEGGGST-TSC----EEEEEEEEECGGGTTC-----------CHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred eeeccceeEEEEecCCCCC-CCc----ceeeeccccCcchhhhccccCcceEEcHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999865421 122 3445544444322 1111 11222 3456789999999999
Q ss_pred CCCcceeecC
Q 018076 352 VDGFEQLSIQ 361 (361)
Q Consensus 352 ~~dId~ie~~ 361 (361)
++|||++-+|
T Consensus 263 ~~did~~v~H 272 (345)
T 3s21_A 263 VEELDQFVIH 272 (345)
T ss_dssp GGGCSEEEEC
T ss_pred HHHCCEEEeC
Confidence 9999999876
|
| >1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-20 Score=177.51 Aligned_cols=177 Identities=14% Similarity=0.149 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
....|+..|+++||+++|+++++++ .|++++..+ +. . ...+.+|+..|
T Consensus 112 ~~~~la~~Aa~~aL~~agl~~~~Id-----~vi~~t~~~----------------------~~----~-p~~a~~v~~~l 159 (393)
T 1ted_A 112 HAVPLAVDVSKRALAGLPYRAAEIG-----LLVLATSTG----------------------FI----A-PGVDVAIVKEL 159 (393)
T ss_dssp HHHHHHHHHHHHHHTTCCCCGGGEE-----EEEEEESSC----------------------CC----S-SCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------Cc----c-ChHHHHHHHHc
Confidence 5678999999999999999876655 677777432 11 1 13567899999
Q ss_pred CCCCC--cccc-ccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQGP--NHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~G~--~~~v-~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|++++ .+.+ +++|+|++.||..|.++|++|.+|.+||+|+|.. +... . |+.++
T Consensus 160 Gl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~-s~~~----------------------~-~~~~r 215 (393)
T 1ted_A 160 GLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELC-SVNA----------------------V-FADDI 215 (393)
T ss_dssp TCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEC-GGGC----------------------C-CCSSH
T ss_pred CcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEec-cccC----------------------C-CCCCH
Confidence 99885 5777 8999999999999999999999999999999962 2110 0 33344
Q ss_pred C----cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEee--cCCCCC----------------CCCCCCcHHHHHHHH
Q 018076 285 D----GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMS--GDAHHI----------------TQPHIDGKGAILAMT 342 (361)
Q Consensus 285 ~----G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~--~d~~~~----------------~~p~~~g~~~~~a~~ 342 (361)
+ ++++||||+++||++.+.+..++. .+++|.+.+.. .|+.+. ..+....+.+.++++
T Consensus 216 ~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~~~~~~~~~~~g~~~~~g~~v~~~~~~~~~~~i~ 294 (393)
T 1ted_A 216 NDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVT 294 (393)
T ss_dssp HHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCchhhccceecCCCeEEecCchHHHHHHHHHHHHHH
Confidence 3 899999999999998765432333 45678887654 554321 001112356788999
Q ss_pred HHHHHcCCCCCCcceeecC
Q 018076 343 RALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 343 ~Al~~Agl~~~dId~ie~~ 361 (361)
++|+++|++++|||+|.+|
T Consensus 295 ~aL~~agl~~~dId~~~~H 313 (393)
T 1ted_A 295 EMLWDNGLQISDIDLWAIH 313 (393)
T ss_dssp HHHHHTTCCGGGCSCEEEC
T ss_pred HHHHHcCCCHhHCCEEEEC
Confidence 9999999999999999876
|
| >4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.1e-20 Score=174.04 Aligned_cols=222 Identities=17% Similarity=0.244 Sum_probs=151.2
Q ss_pred ceEEEeeceeCCCCC-CHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 40 RVVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 40 ~v~ItG~g~~~p~g~-~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
+|.|+|+|..+|... +.+++++.+.... +. ....|... ..+...+. +.
T Consensus 11 ~v~I~g~g~~lP~~~v~~~~l~~~l~~~~--~~--~~~~~i~~----------rtgi~~r~---~~-------------- 59 (333)
T 4dfe_A 11 YSRVLGTGSYLPPNRVTNQDLAKRLAEQG--IE--TSDEWIVA----------RTGIHARY---FA-------------- 59 (333)
T ss_dssp EEEEEEEEEECCSEEEEHHHHHHHHC-----CC--CCHHHHHH----------HHCCSEEE---EC--------------
T ss_pred ceEEEEEEEECCCcEEcHHHHHHHhcccc--CC--CCHHHhHH----------hcCceEEE---Ec--------------
Confidence 699999999999964 8899999874411 10 00111110 00111010 00
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
.+ -.....|+.+|+++||+++|+++++++ .|++++..+.. . ...
T Consensus 60 ~~-----~~~~~~la~~Aa~~al~~ag~~~~~Id-----~vi~~t~~~~~---------------------~-----~p~ 103 (333)
T 4dfe_A 60 EP-----DVTTSDLAFIASQRAIEAADIDPQSID-----LIIVATSTPDF---------------------V-----FPS 103 (333)
T ss_dssp CT-----TCCHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSS---------------------S-----BSC
T ss_pred CC-----CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC---------------------C-----CCc
Confidence 00 123578999999999999999988887 89999854321 1 123
Q ss_pred HHHHHHHHcCC--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 199 ASGHVSMKYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 199 ~a~~is~~lgl--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
.+.+++..+|+ ++|+++|+.+|+|++.||..|+++|++|.++.+||+|+|.. +..
T Consensus 104 ~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~~---------------------- 160 (333)
T 4dfe_A 104 TACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETF-SRI---------------------- 160 (333)
T ss_dssp HHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GGG----------------------
T ss_pred HHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecc-ccc----------------------
Confidence 46789999999 67999999999999999999999999999999999999962 110
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCCC--------------CCCc-----
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQP--------------HIDG----- 334 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~p--------------~~~g----- 334 (361)
. -|+.+..++++||||+++||++.+. ..+ .+....+++.. +..| ...+
T Consensus 161 ~-~~~d~~~~~lfGDGA~A~vl~~~~~-----~~i----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~ 230 (333)
T 4dfe_A 161 L-DFKDRTTCVLFGDGAGAVILQASDE-----PGV----LASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFK 230 (333)
T ss_dssp C-CTTCTTTTTTBCEEEEEEEEEEESS-----CSE----EEEEEEECGGGGGGEEBCEEEETTEEEECCSCEECHHHHHH
T ss_pred c-CcccccceeeeccccEEEEEEEcCC-----CCe----EEEEEEEccCCcCeEEECCCCCCcccccCcceeeccHHHHH
Confidence 0 0223456789999999999997651 223 33333333321 1111 0111
Q ss_pred ---HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 335 ---KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 335 ---~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+.+.++++++|+++|++++|||+|.+|
T Consensus 231 ~~~~~~~~~i~~~l~~~gl~~~did~~~~H 260 (333)
T 4dfe_A 231 LAVNVLEKVAVEALEKANLSAEQIDWLIPH 260 (333)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 456788999999999999999999876
|
| >4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-19 Score=172.77 Aligned_cols=213 Identities=17% Similarity=0.122 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.++++.||+|||+++.+++ ..-.|++++..... . ............++..++..+|+
T Consensus 43 ~dL~a~Ai~~AL~dAGl~p~~Vd-~vI~g~~~~~~~~~-~-----------------~~~~~~~g~~~~~~~~va~~lGl 103 (520)
T 4egv_A 43 VELATEAAKAALHDCGADADTVA-RAIDTVAGTRQFEI-S-----------------GPASAPLGVSSNYPRSVARNIGA 103 (520)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHH-HHCCEEEECCC--------------------------------CCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCcCHHHcc-eEEEEEeecccccc-c-----------------chhhhhhccccCHHHHHHHHcCC
Confidence 46888999999999999887653 22225554332110 0 00011112234456678889999
Q ss_pred CC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhh------------------ccc----cc
Q 018076 210 QG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCK------------------SRA----LT 266 (361)
Q Consensus 210 ~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~------------------~~~----ls 266 (361)
.+ +.++++.+|+|++.+|..|++.|++|++|++|+||+|+..+......... ++. +.
T Consensus 104 ~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 183 (520)
T 4egv_A 104 DPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRGYGYDGIFDEYT 183 (520)
T ss_dssp CCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC----------------------------------CTT
T ss_pred CCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccccccchhHHHHH
Confidence 86 67778899999999999999999999999999999997432211100000 000 00
Q ss_pred ccCC------------------------------------------CCCCCCC--------------------cCCCCCC
Q 018076 267 TKYN------------------------------------------GTPQEAS--------------------RPFDCGR 284 (361)
Q Consensus 267 ~~~~------------------------------------------~~~~~~~--------------------~pfd~~~ 284 (361)
..|+ .+|.... .|+..-.
T Consensus 184 ~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~r~i~~p~~ta~ 263 (520)
T 4egv_A 184 IRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASNRMIVDPYPRLM 263 (520)
T ss_dssp GGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSSCEEETTEEGGG
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCcccccccCCccccc
Confidence 0000 0111111 1222223
Q ss_pred CcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC--CCCCCCC-CcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 285 DGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--HITQPHI-DGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 285 ~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~~~~p~~-~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
|+..++|||+++||.+++.|++.|.++++.|.+++...... .+..|+. .+.+...+++++|++|||+++|||++|+|
T Consensus 264 nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~ 343 (520)
T 4egv_A 264 VARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHADMKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLY 343 (520)
T ss_dssp CC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEEEECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEEC
T ss_pred ccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEeccCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEe
Confidence 55668999999999999999999999988887776654322 2233322 25677999999999999999999999997
|
| >3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-16 Score=148.02 Aligned_cols=174 Identities=16% Similarity=0.170 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
....|+.+|+++||+++|+++++++ .|++++...+. . .+ ..+..|+..+
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId-----~vi~~t~t~~~---------------------~----~p-~~a~~v~~~L 164 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG-----AVLCACSNMQR---------------------A----YP-AMAIEVQNAL 164 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE-----EEEEESSCCSC---------------------S----BS-CHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCCC---------------------C----cc-HHHHHHHHHh
Confidence 4578999999999999999887776 78888753211 1 12 2567889999
Q ss_pred CCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 208 GFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 208 gl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
|++.+++.|+.+|+|++.||..|.++|++|.++.|||+|+|. ++.. ..+.| ...++
T Consensus 165 Gl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~-~S~~----------------------~d~~d-r~t~~ 220 (392)
T 3led_A 165 GLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEI-CSGH----------------------LNFRD-RDSHF 220 (392)
T ss_dssp TCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE-GGGG----------------------CCTTC-TTTTT
T ss_pred CCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehh-cCCc----------------------CCcCc-ccCCc
Confidence 998899999999999999999999999999999999999996 2211 11112 23578
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC-C------C---CC----------CCCcH--------HHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH-I------T---QP----------HIDGK--------GAIL 339 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~-~------~---~p----------~~~g~--------~~~~ 339 (361)
++||||+|+||++.+... .+ ..|.+....+++.. + . .+ ..+|. .+.+
T Consensus 221 lFGDGA~A~vl~~~~~~~-~~----~~i~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~v~~~a~~~~~~ 295 (392)
T 3led_A 221 IFGDVATAAIVERADDAQ-GG----WSILGTKLKTQFSNNIRNNAGFLNRAWPEGRDKADKLFVQQGRKVFKEVVPLVSE 295 (392)
T ss_dssp TBCEEEEEEEEEEGGGCC-SS----EEEEEEEEEECCCSSEEBCCSGGGGGSGGGTTSGGGSCEECHHHHHHHHHHHHHH
T ss_pred ccccccEEEEEEecCCCC-CC----CeEEEEEEEEccccccccCCCcccCCCccccccccceEEechHHHHHHHHHHHHH
Confidence 999999999998754310 11 23444444433221 0 0 00 01222 3355
Q ss_pred HHHHHHHHcCCCCCCcceeecC
Q 018076 340 AMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 340 a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+++++|+++|++++|||++=+|
T Consensus 296 ~i~~~L~~~gl~~~dId~~v~H 317 (392)
T 3led_A 296 MIIEHAREIGIDPHGLKRMWLH 317 (392)
T ss_dssp HHHHHHHHTTCCGGGCSEEEEC
T ss_pred HHHHHHHHcCCCHHHCcEEEEc
Confidence 7899999999999999987443
|
| >3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A | Back alignment and structure |
|---|
Probab=99.68 E-value=7.2e-17 Score=152.84 Aligned_cols=175 Identities=10% Similarity=0.082 Sum_probs=117.5
Q ss_pred CCCCCCCceEEEeeceeCCCCC-CHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCC
Q 018076 33 PPLSPLRRVVVTGIGMVTPLGC-GAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGE 111 (361)
Q Consensus 33 ~~~~~~~~v~ItG~g~~~p~g~-~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 111 (361)
.|.+..+++.|+|+|...|.-. +.+++.+.+. +. + ..|... ..+...+. +
T Consensus 23 ~~~~~~~~v~I~gig~~lP~~~v~n~~l~~~~~-~~------~-~~~i~~----------~tGI~~R~---~-------- 73 (365)
T 3gwa_A 23 TPAAHPPRAAIADIAGHLPEQVLTNDVLAQLYP-DW------P-AEKILA----------KTGIRERR---I-------- 73 (365)
T ss_dssp ------CEEEEEEEEEECCSEEEEHHHHHHHCT-TC------C-HHHHHH----------HHCCCEEE---E--------
T ss_pred CccceeccEEEEEEEEeCCCcEEcHHHHHHHcc-CC------C-HHHHHH----------hcCccEEE---E--------
Confidence 3344578899999999999964 7788777541 11 0 111100 00111110 0
Q ss_pred CCCCCCCCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcch
Q 018076 112 FNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFI 191 (361)
Q Consensus 112 fd~~~~~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (361)
..+ -.....|+..|+++||+++|+++++++ .|++++..++ +.
T Consensus 74 ------a~~-----~~~~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~---------------------~~- 115 (365)
T 3gwa_A 74 ------AAP-----RETAADLAYEAARKLFAQGAVGADQVD-----FVILCTQAPD---------------------YV- 115 (365)
T ss_dssp ------CCT-----TCCHHHHHHHHHHHHHHTTSCCGGGCC-----EEEEEESSCS---------------------CS-
T ss_pred ------CCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCC---------------------CC-
Confidence 001 012467999999999999999998887 8899874321 11
Q ss_pred hhhhhhHHHHHHHHHcCCC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccC
Q 018076 192 PRILINMASGHVSMKYGFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKY 269 (361)
Q Consensus 192 ~~~~~~~~a~~is~~lgl~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~ 269 (361)
.+ ..+..++..+|+. .+++.|+.+|+|++.||..|.++|++|.++.+||+|+|......
T Consensus 116 ---~p-~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~--------------- 176 (365)
T 3gwa_A 116 ---LP-TSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYL--------------- 176 (365)
T ss_dssp ---BS-CHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS---------------
T ss_pred ---CC-cHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccC---------------
Confidence 12 2467899999997 68999999999999999999999999999999999999721110
Q ss_pred CCCCCCCCcCCCCCCCcccccceeeeEeeCChh
Q 018076 270 NGTPQEASRPFDCGRDGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 270 ~~~~~~~~~pfd~~~~G~v~gEGAaalvL~~~~ 302 (361)
.+.| ....+++||||+|+||++.+
T Consensus 177 --------~~~d-r~~~~lfGDGAaA~vl~~~~ 200 (365)
T 3gwa_A 177 --------HPLD-KSVRTLFGDGASATAVIAEH 200 (365)
T ss_dssp --------CTTC-HHHHTTBCCEEEEEEEEEEC
T ss_pred --------Cccc-ccccccccceeEEEEEEecC
Confidence 0101 12356899999999998754
|
| >1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=3.2e-17 Score=156.92 Aligned_cols=165 Identities=16% Similarity=0.144 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEE-EEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTG-VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~g-v~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
...|++.|+++||++ ++ +.+++ |++|+..+.. .. ...+..|+..|
T Consensus 51 ~~~la~~Aa~~aL~~--~~------~~~Id~li~~t~~~~~-------------------------~~-p~~a~~v~~~l 96 (396)
T 1xpm_A 51 IVSMGANAAKDIITD--ED------KKKIGMVIVATESAVD-------------------------AA-KAAAVQIHNLL 96 (396)
T ss_dssp HHHHHHHHHHTTCCH--HH------HHHEEEEEEECSSCSB-------------------------SS-SCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc--CC------HHHCCEEEEEeCCCCC-------------------------CC-CCHHHHHHHHh
Confidence 467999999999987 43 34445 5667644310 01 13567899999
Q ss_pred CCC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 208 GFQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 208 gl~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
|++ .+++.|..+|+|++.||..|.++|++|.++.+||+|+|. +... ++ ..+
T Consensus 97 Gl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~--s~~~------------------------~~-~~~ 149 (396)
T 1xpm_A 97 GIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT--ARYG------------------------LN-SGG 149 (396)
T ss_dssp TCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE--ECCC------------------------TT-CSS
T ss_pred CCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh--hccc------------------------cC-CCC
Confidence 997 489999999999999999999999999999999999994 1110 11 136
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeec-CCCCCCCCCC------CcHH--------HHHHHHHHHHHcCC
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DAHHITQPHI------DGKG--------AILAMTRALKQVVH 350 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~-d~~~~~~p~~------~g~~--------~~~a~~~Al~~Agl 350 (361)
++++||||+++||++. ..+++...|.+... +..+...|.+ +|.. +.++++++|+++|+
T Consensus 150 ~~~~GdGA~A~vl~~~-------~~i~~~~~~~g~~~~d~~~~~~p~~~~~~~~~G~~~~~~~~~~~~~~~~~~L~~agl 222 (396)
T 1xpm_A 150 EPTQGAGAVAMVIAHN-------PSILALNEDAVAYTEDVYDFWRPTGHKYPLVDGALSKDAYIRSFQQSWNEYAKRQGK 222 (396)
T ss_dssp GGGCEEEEEEEEEEES-------CSSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CcccccceEEEEeccC-------CceEEEEeccccccceEEEeeccCCCCCeEEEcHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8999999999999863 23555555544433 4444444433 4544 67899999999999
Q ss_pred CCCCcceeecC
Q 018076 351 NVDGFEQLSIQ 361 (361)
Q Consensus 351 ~~~dId~ie~~ 361 (361)
+++|||+|=+|
T Consensus 223 ~~~did~~~~H 233 (396)
T 1xpm_A 223 SLADFASLCFH 233 (396)
T ss_dssp CGGGCSEEEEC
T ss_pred CHHHCCEEEec
Confidence 99999998654
|
| >3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* | Back alignment and structure |
|---|
Probab=99.65 E-value=4.9e-15 Score=139.78 Aligned_cols=171 Identities=18% Similarity=0.089 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .|++++.... .+... .++..++..+|
T Consensus 54 ~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~~~~-------------------~~d~~------~~a~~v~~~lG 103 (357)
T 3s3l_A 54 PPRMAARAARAALGRGDVDPADVS-----LVLHSSLWFQ-------------------GIDLW------PAASYVAHEAV 103 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSSCC-------------------SSSSS------CHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCC-------------------Ccccc------cHHHHHHHHhC
Confidence 568999999999999999887776 7888874200 11110 23667888899
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCC--EEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d--~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
+.. +++.|+.+|+|++.||..|..+|++|.++ .+||+|+|....+. ..+|+. +.
T Consensus 104 ~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------------------~~~~~~-~~ 160 (357)
T 3s3l_A 104 GRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------------------IDRWNS-VD 160 (357)
T ss_dssp CSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------------------CCTTTS-SS
T ss_pred CCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------------------cccccc-cC
Confidence 964 88999999999999999999999999999 99999999722111 011222 35
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC--C------CCC-C------C--Cc--------------
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH--I------TQP-H------I--DG-------------- 334 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~--~------~~p-~------~--~g-------------- 334 (361)
++++||||+|+||++.+. + ..|.++...+++.. + ..| . . ++
T Consensus 161 ~~lfGDGA~A~vl~~~~~----~----~~i~~~~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~ 232 (357)
T 3s3l_A 161 VTMYGDGAAALVLSTRDG----F----ARVLSTATGVDNSLEILARGDEPFAPHPVEPSPVADLGTRTVRGAELADLPDL 232 (357)
T ss_dssp SCCBCCEEEEEEEESSCC----S----EEEEEEEEEECGGGGGGGTTTCCCCSSCCSSCCCCCHHHHHHHHHHHHCCTTH
T ss_pred CcccccccEEEEEecCCC----C----CeEEEEEEEEccChhhhcccCCCCCCCccCcCCccccccchhhhhcccchhhh
Confidence 889999999999987531 1 13445544444431 0 001 0 0 11
Q ss_pred -----HHHHHHHHHHHHHcCCCCCCcceeec
Q 018076 335 -----KGAILAMTRALKQVVHNVDGFEQLSI 360 (361)
Q Consensus 335 -----~~~~~a~~~Al~~Agl~~~dId~ie~ 360 (361)
..+.++++++|+++|++++|||++=+
T Consensus 233 ~~~~~~~~~~~i~~~L~~~gl~~~did~~v~ 263 (357)
T 3s3l_A 233 THRYIDLLVAAKTQALEDAGTAIEDIAHAVI 263 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence 13456889999999999999999843
|
| >3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A | Back alignment and structure |
|---|
Probab=99.65 E-value=3e-16 Score=149.85 Aligned_cols=180 Identities=9% Similarity=0.031 Sum_probs=124.8
Q ss_pred chhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHH
Q 018076 120 SKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMA 199 (361)
Q Consensus 120 ~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (361)
.+....+.....|+.+|+++||+++|+++++++ .|++++..+. .....
T Consensus 89 ~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~~---------------------------~~p~~ 136 (387)
T 3a5r_A 89 VRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT-----HLIVCCLAGV---------------------------DMPGA 136 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSCC---------------------------EESCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEecCCC---------------------------CCCcH
Confidence 344444567788999999999999999988887 8888874321 11235
Q ss_pred HHHHHHHcCCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 200 SGHVSMKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 200 a~~is~~lgl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
+.+++..+|+++. .+.++.+|+|++.||..|.++|++|.++.|||+|+|.. +.. .
T Consensus 137 a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~~---------------------~ 194 (387)
T 3a5r_A 137 DYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMT-TTC---------------------F 194 (387)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECC-TTT---------------------C
T ss_pred HHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEecc-chh---------------------h
Confidence 7789999999875 78899999999999999999999999999999999972 210 1
Q ss_pred CcCCC----CCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCC--C------------CCC----CCCCc
Q 018076 277 SRPFD----CGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAH--H------------ITQ----PHIDG 334 (361)
Q Consensus 277 ~~pfd----~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~--~------------~~~----p~~~g 334 (361)
..|+| ....++++||||+++||++.+.. .......++.+.+...... . +.. +....
T Consensus 195 ~~~~d~~~~~~~~~~lfGDGA~A~vl~~~~~~--~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 272 (387)
T 3a5r_A 195 RGPSETHLDSMIGQAILGDGAAAVIVGADPDL--TVERPIFELVSTAQTIVPESHGAIEGHLLESGLSFHLYKTVPTLIS 272 (387)
T ss_dssp CCCCSSCCSSTTHHHHBCCEEEEEEEESSCCT--TTCCCCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHH
T ss_pred cCCCccchhhccccceeccceeEEEEecCCCc--cccCCceEEEeeeEEEeCCChHhcCceEcCCCeEEEecchHHHHHH
Confidence 12332 23468899999999999876531 1011123455444321111 0 000 00012
Q ss_pred HHHHHHHHHHHHHcCCC-CCCc
Q 018076 335 KGAILAMTRALKQVVHN-VDGF 355 (361)
Q Consensus 335 ~~~~~a~~~Al~~Agl~-~~dI 355 (361)
+.+.++++++|+++|++ .+||
T Consensus 273 ~~~~~~i~~~L~~~gl~d~~di 294 (387)
T 3a5r_A 273 NNIKTCLSDAFTPLNISDWNSL 294 (387)
T ss_dssp HHHHHHHHHHHGGGTCCCGGGS
T ss_pred HHHHHHHHHHHHhcCCCChhhe
Confidence 45567899999999998 7777
|
| >3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-16 Score=144.60 Aligned_cols=169 Identities=15% Similarity=0.151 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++..+.. . .+ ..+.+++..+|
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id-----~vi~~t~~~~~---------------------~----~p-~~a~~v~~~lG 106 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE-----LIIVATTSHSH---------------------A----YP-SAACQVQGLLN 106 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC-----EEEEECSCCSC---------------------S----SS-CHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC---------------------C----Cc-cHHHHHHHHhC
Confidence 467999999999999999998887 89998854311 1 12 25678999999
Q ss_pred CC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
++ .+++.|+.+|+|++.||..|.++|++|.++.+||+|+|.. +.. .. +..+...+
T Consensus 107 l~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~-s~~----------------------~~-~~d~~~~~ 162 (323)
T 3il3_A 107 IDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLN-SRK----------------------LD-ETDRSTVV 162 (323)
T ss_dssp CSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG-GGS----------------------CC-TTCTTTTT
T ss_pred CCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecc-ccc----------------------cC-cccccccc
Confidence 95 5899999999999999999999999999999999999962 110 01 11123578
Q ss_pred cccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCCCC------------CCc--------HHHHHHHHHH
Q 018076 288 VIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQPH------------IDG--------KGAILAMTRA 344 (361)
Q Consensus 288 v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~p~------------~~g--------~~~~~a~~~A 344 (361)
++||||+|+||++.+ +..+ .+....+++.. +..|. ..+ +.+.++++++
T Consensus 163 lfGDGA~A~vl~~~~-----~~~i----~~~~~~s~g~~~~~~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~ 233 (323)
T 3il3_A 163 LFGDGAGAVILEASE-----QEGI----ISTHLHASADKNNALVLAQPERGIEKSGYIEMQGNETFKLAVRELSNVVEET 233 (323)
T ss_dssp TBCEEEEEEEEEEES-----SCCE----EEEEEEECCCCSCSEECCCCCTTCSSCSCCEECHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEEEEEEcC-----CCCe----EEEEEEEcCCCcceEEECCCCCCCCCCCcEEEcCHHHHHHHHHHHHHHHHHH
Confidence 899999999998754 1223 33333333211 11110 012 2345678999
Q ss_pred HHHcCCCCCCcceeecC
Q 018076 345 LKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 345 l~~Agl~~~dId~ie~~ 361 (361)
|+++|++++|||++=+|
T Consensus 234 l~~~gl~~~did~~v~H 250 (323)
T 3il3_A 234 LLANNLDKKDLDWLVPH 250 (323)
T ss_dssp HHTTTCCTTTCCEEEEC
T ss_pred HHHcCCCHHHCCEEEEc
Confidence 99999999999987443
|
| >3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.4e-16 Score=147.80 Aligned_cols=172 Identities=14% Similarity=0.098 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++..+. +. .+ ..+..++..+|
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId-----~vi~~t~~~~---------------------~~----~p-~~a~~v~~~lG 122 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID-----LLLVNTLSPD---------------------HH----DP-SQACLIQPLLG 122 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC-----EEEEECSSCS---------------------SS----BS-CHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC-----EEEEEeCCCC---------------------CC----CC-cHHHHHHHHcC
Confidence 357999999999999999998887 8999875421 11 11 25678899999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCC-CCCc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC-GRDG 286 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~-~~~G 286 (361)
++. +.+.|+.+|+|++.||..|..+|++|.++.+||+|+|.. +.. ..+-|. ....
T Consensus 123 l~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~-S~~----------------------~~~~d~~~~t~ 179 (359)
T 3h78_A 123 LRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVL-SKR----------------------MDCSDRGRNLS 179 (359)
T ss_dssp CCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEC-GGG----------------------CCCSTTTHHHH
T ss_pred CCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchh-ccc----------------------CCccccccccc
Confidence 964 889999999999999999999999999999999999962 211 001010 1245
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCC--------C--------------CCCc-------
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQ--------P--------------HIDG------- 334 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~--------p--------------~~~g------- 334 (361)
+++||||+|+||++.+. .+..++ ++...+++.. +.. | ...+
T Consensus 180 ~lfGDGAaA~vl~~~~~---~~~~i~----~~~~~s~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~m~g~~v~~~~ 252 (359)
T 3h78_A 180 ILLGDGAGAVVVSAGES---LEDGLL----DLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHA 252 (359)
T ss_dssp TTBCEEEEEEEEECCSC---SSSEEE----EEEEEECGGGGGGEEBCCSSTTSSSTTCHHHHHTTTTSCEECHHHHHHHH
T ss_pred ceecceeEEEEEEecCC---CCCceE----EEEEEEccCccceEEeCCCCCccCCccccccccccCCceEeccHHHHHHH
Confidence 77999999999987542 122333 3333222210 000 1 0012
Q ss_pred -HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 335 -KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 335 -~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
..+.++++++|+++|++++|||+|=+|
T Consensus 253 ~~~~~~~i~~~L~~~gl~~~did~~v~H 280 (359)
T 3h78_A 253 SQTLVRIAGEMLAAHELTLDDIDHVICH 280 (359)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEC
Confidence 234568899999999999999987544
|
| >1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A | Back alignment and structure |
|---|
Probab=99.60 E-value=9.8e-16 Score=147.35 Aligned_cols=178 Identities=13% Similarity=0.058 Sum_probs=124.0
Q ss_pred ccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHH
Q 018076 125 SIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVS 204 (361)
Q Consensus 125 ~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 204 (361)
.++....|+.+|+++||+++|+++++++ .|++++..+ . .. ...+..|+
T Consensus 121 ~~~~~~~La~~Aa~~AL~~agl~~~~Id-----~li~~t~~~----------------------~----~~-p~~a~~v~ 168 (413)
T 1xes_A 121 LAMEVPRLAKEAAEKAIQEWGQSKSGIT-----HLIFCSTTT----------------------P----DL-PGADFEVA 168 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESCC----------------------C----EE-SCHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------C----cc-chHHHHHH
Confidence 3456788999999999999999988877 888887532 1 11 23467899
Q ss_pred HHcCCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCC
Q 018076 205 MKYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFD 281 (361)
Q Consensus 205 ~~lgl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd 281 (361)
..||+++. ++.++.+|+|++.||..|.++|++|.++.|||+|+|.....+ .. +. .++|+
T Consensus 169 ~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~----------~~------~~--d~~~~ 230 (413)
T 1xes_A 169 KLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF----------RG------PS--ETHLD 230 (413)
T ss_dssp HHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC----------CC------CC--TTCHH
T ss_pred HHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh----------cC------CC--ccchh
Confidence 99999875 788999999999999999999999999999999999722101 00 11 13455
Q ss_pred CCCCcccccceeeeEeeCChhhHHhcC-CeeeEEEEEEEeecC--CCC------------CCC----CCCCcHHHHHHHH
Q 018076 282 CGRDGFVIGEGSGVLVLEELEHAKKRG-AKIYAEVRGYGMSGD--AHH------------ITQ----PHIDGKGAILAMT 342 (361)
Q Consensus 282 ~~~~G~v~gEGAaalvL~~~~~A~~~g-~~~~a~i~g~~~~~d--~~~------------~~~----p~~~g~~~~~a~~ 342 (361)
....++++||||+++||++.+.. + .....++.+.+.... ... +.. +....+.+.++++
T Consensus 231 ~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~~i~ 307 (413)
T 1xes_A 231 SLVGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMV 307 (413)
T ss_dssp HHHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHH
T ss_pred hcccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCChhhcCcEEecCceEEEecccHHHHHHHHHHHHHH
Confidence 55678999999999999876531 2 111234554443211 100 000 0011245677899
Q ss_pred HHHHHcCCC-CCCc
Q 018076 343 RALKQVVHN-VDGF 355 (361)
Q Consensus 343 ~Al~~Agl~-~~dI 355 (361)
++|+++|++ .+||
T Consensus 308 ~~L~~~gl~d~~di 321 (413)
T 1xes_A 308 EAFSQFKISDWNKL 321 (413)
T ss_dssp HHHGGGTCCCGGGS
T ss_pred HHHHhcCCCCccce
Confidence 999999998 6776
|
| >4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-16 Score=149.00 Aligned_cols=169 Identities=11% Similarity=0.138 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++..++. . ....+..++..+|
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id-----~vi~~t~~~~~---------------------~-----~p~~a~~v~~~lG 114 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID-----ALIFVSQTPNY---------------------R-----LPATAFVLQAELD 114 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC---------------------S-----SSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC---------------------C-----CCcHHHHHHHHcC
Confidence 467999999999999999998887 89999854321 1 1234678999999
Q ss_pred C--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 F--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
+ ..+.+.|+.+|+|++.||..|.++|++|.++.+||+|+|. .+... . ++.....
T Consensus 115 l~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~-~s~~~----------------------~-~~d~~~~ 170 (354)
T 4efi_A 115 LPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDT-ISKMI----------------------D-PTDRSTS 170 (354)
T ss_dssp CCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEEC-GGGGC----------------------C-TTCHHHH
T ss_pred cCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEech-hcccC----------------------C-ccccccc
Confidence 9 3689999999999999999999999999999999999997 22110 0 1111236
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---CCC------CC-----------------CCc------
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---ITQ------PH-----------------IDG------ 334 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~~~------p~-----------------~~g------ 334 (361)
+++||||+|+||++.+. ..++ .+...+++.. +.. |. ..|
T Consensus 171 ~lfGDGA~A~vl~~~~~-----~~~~----~~~~~s~g~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~g~~v~~~ 241 (354)
T 4efi_A 171 LLFGDAGTMTALETSNG-----DAAA----HFIIGADGKGARNLIVPSGGFKPYDAAADERMAGKSPECLFMDGGEIFNF 241 (354)
T ss_dssp TTBCCEEEEEEEEECCS-----CCEE----EEEEEECGGGGGGEECCSSSSSCCCGGGCGGGTTCCTTSCEECHHHHHHH
T ss_pred cccccceeEEEEeecCC-----CCce----EEEEEEcCCCcceEEecCCCCCCCccccccccccccccceEEccHHHHHH
Confidence 78999999999987542 1121 2222222210 000 10 012
Q ss_pred --HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 335 --KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 335 --~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+.+.++++++|+++|++++|||++=+|
T Consensus 242 ~~~~~~~~i~~~l~~~gl~~~did~~v~H 270 (354)
T 4efi_A 242 TLNAVPKLVSRTLDIAGRDKDSYDAFLFH 270 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEeC
Confidence 344567899999999999999997443
|
| >2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.9e-14 Score=139.74 Aligned_cols=168 Identities=13% Similarity=0.109 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++|+..+.. .....+..|+..||
T Consensus 52 ~~~La~~Aa~~aL~~agi~~~~Id-----~li~~t~t~~~--------------------------~~p~~a~~v~~~lg 100 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDPKQIG-----RLEVGSETVID--------------------------KSKSIKTFLMQLFE 100 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECCCCSC--------------------------SSSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHcCcCHHHCC-----EEEEEecCCCC--------------------------CCCcHHHHHHHHhC
Confidence 467999999999999999866554 67778753211 01235667888888
Q ss_pred C----CCCccccccchhhHHHHHHHHHHHHHcCCC--CEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCC
Q 018076 209 F----QGPNHAAVTACATGAHSIGDAARMIQFGDS--DVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (361)
Q Consensus 209 l----~G~~~~v~~acasgl~Al~~A~~~I~~G~~--d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 282 (361)
+ ..+++.|..+|+|++.||..|.++|++|.+ +.+||+|+|.. + |+.
T Consensus 101 l~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~-~---------------------------~~~ 152 (450)
T 2f82_A 101 KCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSA-V---------------------------YAE 152 (450)
T ss_dssp TTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEE-C---------------------------CSS
T ss_pred CcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeec-c---------------------------ccC
Confidence 7 357899999999999999999999999998 99999999962 1 111
Q ss_pred CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCC-------CCCCcH--------HHHHHHHHHHH-
Q 018076 283 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQ-------PHIDGK--------GAILAMTRALK- 346 (361)
Q Consensus 283 ~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~-------p~~~g~--------~~~~a~~~Al~- 346 (361)
...+.++||||+|+||++.+. . .+.....|..... .++... |...|. .+..+++++|+
T Consensus 153 ~~~~~~fGDGA~A~ll~~~~~----~-~~~~~~~g~~~~~-~~d~~~p~~~~~~~~~~G~~~~~~~~~~l~~~~~~~l~~ 226 (450)
T 2f82_A 153 GPARPTGGAAAIAMLIGPDAP----I-VFESKLRGSHMAH-VYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNK 226 (450)
T ss_dssp STTGGGCEEEEEEEEEESSCS----E-EEEEEEEEEEECC-CCSEECCCTTCSCCEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccccceEEEEeccCCc----e-EEEeccceeehhh-ccceeeeCCCCCceeecCccHHHHHHHHHHHHHHHHHHH
Confidence 235788999999999987542 1 1221223433322 111122 223342 35577888886
Q ss_pred -----HcCCCCCCcceeecC
Q 018076 347 -----QVVHNVDGFEQLSIQ 361 (361)
Q Consensus 347 -----~Agl~~~dId~ie~~ 361 (361)
++|++++|||+|=+|
T Consensus 227 ~~~~~~agl~~~did~~v~H 246 (450)
T 2f82_A 227 FEKLEGKEFSINDADYFVFH 246 (450)
T ss_dssp HHHHHSSCCCGGGCSEEEEC
T ss_pred hhhccccCCChhhcCEEEec
Confidence 899999999998654
|
| >3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.5e-14 Score=138.68 Aligned_cols=183 Identities=10% Similarity=0.057 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+.+|+++||+++|+++++++ .|++++..+ . .....+..|+..||+
T Consensus 111 ~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t~-~--------------------------~~P~~a~~v~~~LGl 158 (465)
T 3e1h_A 111 VPLAVEASRKAMAEARLVPAQIT-----HMVSTTCTD-S--------------------------ANPGYDHYVAKELGL 158 (465)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSC-C--------------------------CSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC-C--------------------------CCCcHHHHHHHHhCC
Confidence 47999999999999999998888 889988541 1 112346789999999
Q ss_pred CC-C-cccc-ccchhhHHHHHHHHHHHHHc----CCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCC
Q 018076 210 QG-P-NHAA-VTACATGAHSIGDAARMIQF----GDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (361)
Q Consensus 210 ~G-~-~~~v-~~acasgl~Al~~A~~~I~~----G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 282 (361)
+. + .+.| ..+|++++.||..|..+|++ |.++.|||+|+|. ++...-....... ...+.
T Consensus 159 ~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~-~S~~~~~~~~~~~--------------~~~~d 223 (465)
T 3e1h_A 159 SDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEV-STTMVRSELESID--------------ALQET 223 (465)
T ss_dssp CTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEEC-CGGGHHHHHHHHH--------------HHTCC
T ss_pred CCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEee-cchhcCccccccc--------------ccccc
Confidence 86 4 5788 79999999999999999997 9999999999997 3333211111100 00122
Q ss_pred CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCC---C--C--------CCCCC-----cHHHHHHHHHH
Q 018076 283 GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHH---I--T--------QPHID-----GKGAILAMTRA 344 (361)
Q Consensus 283 ~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~---~--~--------~p~~~-----g~~~~~a~~~A 344 (361)
....+++||||+|+||++.+... .....+..+.+......... + . ....+ ...+.++++++
T Consensus 224 ~~t~~LFGDGAaAvVl~~~~~~~-~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~g~~~~~g~~V~~~a~~~v~~~i~~~ 302 (465)
T 3e1h_A 224 RIGIALFSDCASAVILSNGIGEA-PGKPAIYDLLGWENRVIPDSEHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADL 302 (465)
T ss_dssp CCHHHHBCCEEEEEEEECCTTCC-TTCCCSEEEEEEEEEECTTCTTTEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeEEEEEccCCCc-cccccceeeccceEEEecCCccccCccccCCCceEecChHHHHHHHHHHHHHHHHH
Confidence 34578899999999998754211 01222335555443322110 0 0 00011 24556778888
Q ss_pred HHH-------cCCCCCCcceeecC
Q 018076 345 LKQ-------VVHNVDGFEQLSIQ 361 (361)
Q Consensus 345 l~~-------Agl~~~dId~ie~~ 361 (361)
|++ +|++++|||++ +|
T Consensus 303 L~~~g~~L~~agl~~~DId~~-~H 325 (465)
T 3e1h_A 303 LSSLQDQLPSSYQKPADFDWA-MH 325 (465)
T ss_dssp HHHHGGGSCTTSCSGGGSEEE-EC
T ss_pred HHhccccccccCCCHHHceEE-ec
Confidence 887 68999999998 76
|
| >4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} | Back alignment and structure |
|---|
Probab=99.54 E-value=1e-14 Score=137.32 Aligned_cols=119 Identities=22% Similarity=0.286 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++..+.. .....+..|+..||
T Consensus 62 ~~~la~~Aa~~aL~~ag~~~~dId-----~li~~t~t~~~--------------------------~~P~~a~~v~~~LG 110 (350)
T 4ewp_A 62 VPVMAVGAAREALERAGLQGSDLD-----AVIVSTVTFPH--------------------------ATPSAAALVAHEIG 110 (350)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCS-----EEEEECSCCSC--------------------------SSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccCCC--------------------------CCCchHHHHHHHhC
Confidence 457999999999999999998887 88888854321 11234667899999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
++. +++.|..+|++++.||..|..+|++|..+.+||+++|. .+.. ..| ......+
T Consensus 111 l~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~-~s~~----------------------~d~-~~~~~~~ 166 (350)
T 4ewp_A 111 ATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVER-LSDV----------------------VDP-TDRSISF 166 (350)
T ss_dssp CTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE-GGGG----------------------CCT-TCTTTGG
T ss_pred CCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeee-ceec----------------------ccc-ccccccc
Confidence 975 78889999999999999999999999999999999996 1111 111 2234578
Q ss_pred cccceeeeEeeCChh
Q 018076 288 VIGEGSGVLVLEELE 302 (361)
Q Consensus 288 v~gEGAaalvL~~~~ 302 (361)
++||||+++||+..+
T Consensus 167 lfgDGA~A~vl~~~~ 181 (350)
T 4ewp_A 167 LLGDGAGAVIVAASD 181 (350)
T ss_dssp GBCEEEEEEEEEEES
T ss_pred ccccchheeeeeccc
Confidence 899999999998754
|
| >3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-14 Score=134.92 Aligned_cols=119 Identities=13% Similarity=0.125 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++...+. . . ...+..++..+|
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id-----~li~~t~~~~~---------------------~----~-p~~a~~v~~~lG 100 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEID-----FILVATVTPDF---------------------N----M-PSVACQVQGAIG 100 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSSCSC---------------------S----S-SCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCc---------------------C----C-CcHHHHHHHHcC
Confidence 578999999999999999988887 89999854211 1 1 135678999999
Q ss_pred CC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
++ .+++.|+.+|+|++.||..|.++|++|.++.+||+|+|. .+... . +..+...+
T Consensus 101 l~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~-~s~~~----------------------~-~~dr~~~~ 156 (321)
T 3il6_A 101 ATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGET-FSKML----------------------D-WTDRSTAV 156 (321)
T ss_dssp CTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEEC-GGGGS----------------------C-TTCTTTGG
T ss_pred CCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEcc-ccccC----------------------C-ccccccce
Confidence 97 588999999999999999999999999999999999997 22110 1 12223568
Q ss_pred cccceeeeEeeCChh
Q 018076 288 VIGEGSGVLVLEELE 302 (361)
Q Consensus 288 v~gEGAaalvL~~~~ 302 (361)
++||||+|+||++.+
T Consensus 157 lfGDGA~A~vl~~~~ 171 (321)
T 3il6_A 157 LFGDGAAGVLIEAAE 171 (321)
T ss_dssp GBCCEEEEEEEEEES
T ss_pred eeccccEEEEEEEcC
Confidence 899999999998754
|
| >3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A | Back alignment and structure |
|---|
Probab=99.51 E-value=3.4e-13 Score=124.10 Aligned_cols=170 Identities=18% Similarity=0.148 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||++||+++++++ .+++|+.. +... .+..++..++
T Consensus 55 ~sdLa~~Aa~~AL~~AGi~~~DID-----~II~gt~t----------------------~q~~-------~A~~va~~Lg 100 (347)
T 3lma_A 55 ERKLMEDAVQSALSKQNLKKEDID-----IFLAGDLL----------------------NQNV-------TANYVARHLK 100 (347)
T ss_dssp HHHHHHHHHHHHHHTTTCCGGGCS-----EEEEEESS----------------------SSST-------THHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCC----------------------Cchh-------HHHHHHHHhC
Confidence 457999999999999999999988 89998742 1111 3445566665
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCccc
Q 018076 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288 (361)
Q Consensus 209 l~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v 288 (361)
+ |.+.|+++|+|++.||..|..+|++|.++.|||+|+|..........|.. ..+..+|.. -..
T Consensus 101 i--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~aerq~r~p~-----------e~g~q~p~t----a~~ 163 (347)
T 3lma_A 101 I--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATAERQFRYPT-----------EYGGQKPGT----ATS 163 (347)
T ss_dssp C--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGTTCCC-------------------------------
T ss_pred C--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccchhhhccCcc-----------hhcccCCch----hcE
Confidence 4 89999999999999999999999999999999999997221110000000 001112221 223
Q ss_pred ccceeeeEeeCChhhHHhcCCeeeEEEEEEEe--ecCCCCCCCCCCCc----HHHHHHHHHHHHHcCCCCCCccee
Q 018076 289 IGEGSGVLVLEELEHAKKRGAKIYAEVRGYGM--SGDAHHITQPHIDG----KGAILAMTRALKQVVHNVDGFEQL 358 (361)
Q Consensus 289 ~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~--~~d~~~~~~p~~~g----~~~~~a~~~Al~~Agl~~~dId~i 358 (361)
.++||+|+||++.. ..+ .|.+... ..| .....|...+ .....+|.+.|+++|++|+|+|+|
T Consensus 164 t~dGAGA~VL~~~g------~~p--~I~~~t~Gkvvd-~g~~d~~nmg~amaPaA~~ti~~~l~d~g~~~~d~D~i 230 (347)
T 3lma_A 164 TVTGSGAVVLSQQP------GGI--KITSATVGRVID-LGITDSQDMGSAMAPAAADTIKQHLEDLGRTPDDYDLI 230 (347)
T ss_dssp CCCEEEEEEEESSC------CSE--EEEEEECCCCBC-CSCCCTTCHHHHHHHHHHHHHHHHHHHHTCCGGGCSEE
T ss_pred EccceeEEEEEecC------CCC--ceeeeeeeeeec-cCCCCCCCccccchHHHHHHHHHHHHHhCCCHHHcCEE
Confidence 45899999998643 222 2444322 122 2233333223 334567899999999999999998
|
| >3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-13 Score=132.06 Aligned_cols=123 Identities=11% Similarity=0.083 Sum_probs=95.9
Q ss_pred cCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHH
Q 018076 126 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 205 (361)
Q Consensus 126 ~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 205 (361)
++....|+.+|+++||+++|+++++++ .|++++..+ +. . ...+..|+.
T Consensus 93 ~~~~~~La~~Aa~~AL~~ag~~~~dId-----~li~~t~t~----------------------~~----~-p~~a~~v~~ 140 (387)
T 3oit_A 93 ADAVPELAAEAAKKAIAEWGRPAADIT-----HLVVTTNSG----------------------AH----V-PGVDFRLVP 140 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC----------------------CE----E-SCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeeCC----------------------CC----c-ccHHHHHHH
Confidence 346778999999999999999998887 899987432 11 1 235678999
Q ss_pred HcCCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCC
Q 018076 206 KYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (361)
Q Consensus 206 ~lgl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 282 (361)
.+|+.+. .+.+..+|++++.||..|..+|++|.++.+||+|+|..... ...|-|.
T Consensus 141 ~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~----------------------~~~~~d~ 198 (387)
T 3oit_A 141 LLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMY----------------------FTGPDEG 198 (387)
T ss_dssp HHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGT----------------------CCCCCSS
T ss_pred HhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchh----------------------ccCcccc
Confidence 9999874 68899999999999999999999999999999999972100 0111111
Q ss_pred ----CCCcccccceeeeEeeCChh
Q 018076 283 ----GRDGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 283 ----~~~G~v~gEGAaalvL~~~~ 302 (361)
....+++||||+|+||++.+
T Consensus 199 ~~~~~~~~~lFGDGAaA~vl~~~~ 222 (387)
T 3oit_A 199 CFRTLLVQGLFGDGAAAVIVGADA 222 (387)
T ss_dssp SCHHHHHHHHBCCEEEEEEEESSC
T ss_pred chHhhhcccccccceEEEEEecCC
Confidence 12478899999999998754
|
| >3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A | Back alignment and structure |
|---|
Probab=99.50 E-value=5.4e-14 Score=134.22 Aligned_cols=175 Identities=14% Similarity=0.068 Sum_probs=118.8
Q ss_pred cCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHH
Q 018076 126 IARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 205 (361)
Q Consensus 126 ~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 205 (361)
......|+.+|+++||+++|+++++++ .|++++..+ +. ....+..|+.
T Consensus 99 ~~~~~~La~~Aa~~aL~~ag~~~~dId-----~vi~~t~t~----------------------~~-----~p~~a~~v~~ 146 (393)
T 3ov2_A 99 VEEIPRLAKEAAEKAIKEWGRPKSEIT-----HLVFCSISG----------------------ID-----MPGADYRLAT 146 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCC-----EEEEEESSC----------------------CC-----BSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEEeCC----------------------CC-----CCCHHHHHHH
Confidence 345678999999999999999998887 899988542 11 1235678999
Q ss_pred HcCCCCC---ccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCC
Q 018076 206 KYGFQGP---NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (361)
Q Consensus 206 ~lgl~G~---~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 282 (361)
.+|+.+. .+.++.+|++++.||..|.++|++|.++.|||+|+|.. +. ....|-|.
T Consensus 147 ~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~-s~---------------------~~~~~~d~ 204 (393)
T 3ov2_A 147 LLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEIT-VL---------------------SFRGPNEG 204 (393)
T ss_dssp HHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECG-GG---------------------TCCCCCTT
T ss_pred HcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEecc-ch---------------------hccCCccc
Confidence 9999874 68999999999999999999999999999999999972 10 01111111
Q ss_pred ----CCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeec--CCC------------CCCCCCCC-----cHHHHH
Q 018076 283 ----GRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG--DAH------------HITQPHID-----GKGAIL 339 (361)
Q Consensus 283 ----~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~--d~~------------~~~~p~~~-----g~~~~~ 339 (361)
....+++||||+|+||++.+... -....+ .+...+... +.. .+.. +.+ ...+.+
T Consensus 205 ~~~~~~~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~-~~~v~~~~~~~~~~ 281 (393)
T 3ov2_A 205 DFEALAGQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQETVAESQGAVGGHLRAFGWTFYF-LNQLPAIIADNLGR 281 (393)
T ss_dssp CHHHHHHHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEEECTTCTTSEEEEEETTEEEEEE-CTTHHHHHHTTSHH
T ss_pred chhhhcccccccCccEEEEEEecCCCc-ccCcee-EEEecCcEEecCCcccCceeeeCCceEEEE-CcHHHHHHHHHHHH
Confidence 12477899999999998754321 011122 333322211 100 0000 111 122356
Q ss_pred HHHHHHHHcCCCC-CCccee
Q 018076 340 AMTRALKQVVHNV-DGFEQL 358 (361)
Q Consensus 340 a~~~Al~~Agl~~-~dId~i 358 (361)
+++++|+++|+++ +|| ++
T Consensus 282 ~i~~~L~~~gl~~~~di-~~ 300 (393)
T 3ov2_A 282 SLERALAPLGVREWNDV-FW 300 (393)
T ss_dssp HHHHHHGGGTCCSGGGS-EE
T ss_pred HHHHHHHHcCCCcccCc-EE
Confidence 8999999999997 888 54
|
| >3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=2.9e-14 Score=135.73 Aligned_cols=166 Identities=13% Similarity=0.120 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++| +++++ .|++++..+.. . . ...+..|+..||
T Consensus 56 ~~~La~~Aa~~aL~~a~--~~~Id-----~li~~t~t~~~---------------------~----~-ps~a~~v~~~LG 102 (388)
T 3v4n_A 56 IVTFAANAAEAILTKED--KEAID-----MVIVGTESSID---------------------E----S-KAAAVVLHRLMG 102 (388)
T ss_dssp HHHHHHHHHHTTCCHHH--HHHEE-----EEEEECSSCSB---------------------S----S-SCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCC--cccCC-----EEEEEeccCCC---------------------c----C-ccHHHHHHHHcC
Confidence 46799999999999986 45555 78888754321 0 1 234678999999
Q ss_pred CCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
+.+ +++.+..+|++++.||..|..+|++|.++.+||+|+|.... .++ ..+.
T Consensus 103 l~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~--------------------------~~~-~~~~ 155 (388)
T 3v4n_A 103 IQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKY--------------------------GLN-SGGE 155 (388)
T ss_dssp CCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECC--------------------------CTT-CTTG
T ss_pred CCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhcc--------------------------cCC-CCCC
Confidence 975 78889999999999999999999999999999999996211 011 1235
Q ss_pred ccccceeeeEeeCChhhHHhcCCeeeEEEEE-EEeecCCCCCCCCC------CCc--------HHHHHHHHHHHHHcCCC
Q 018076 287 FVIGEGSGVLVLEELEHAKKRGAKIYAEVRG-YGMSGDAHHITQPH------IDG--------KGAILAMTRALKQVVHN 351 (361)
Q Consensus 287 ~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g-~~~~~d~~~~~~p~------~~g--------~~~~~a~~~Al~~Agl~ 351 (361)
.+.||||+|+||++.+ .++....+ .+...+......|. ..+ +.+..+++++|+++|++
T Consensus 156 ~lfGDGA~A~ll~~~~-------~il~~~~~~~~~~~~~~df~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~g~~ 228 (388)
T 3v4n_A 156 PTQGAGAVAMLVSSEP-------RILALKEDNVMLTQDIYDFWRPTGHPYPMVDGPLSNETYIQSFAQVWDEHKKRTGLD 228 (388)
T ss_dssp GGCEEEEEEEEEEESC-------SSEEECSCCEEEECCCCSEECBTTCSSCEECHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CccccceeEEEeecCC-------CceEEeccccccchhccccccCCCCCCceeccHhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8899999999998742 22211111 11122222111222 122 45567899999999999
Q ss_pred CCCcceeecC
Q 018076 352 VDGFEQLSIQ 361 (361)
Q Consensus 352 ~~dId~ie~~ 361 (361)
++|||++=+|
T Consensus 229 ~~did~~v~H 238 (388)
T 3v4n_A 229 FADYDALAFH 238 (388)
T ss_dssp GGGCSEEEEC
T ss_pred HHHCCEEEeC
Confidence 9999998544
|
| >2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.1e-12 Score=125.95 Aligned_cols=114 Identities=10% Similarity=0.092 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++..+.. .....+..|+..|+
T Consensus 73 ~~~La~~Aa~~aL~~agi~~~dId-----~li~~T~t~~~--------------------------~~ps~a~~v~~~L~ 121 (478)
T 2p8u_A 73 INSLCMTVVQNLMERNNLSYDCIG-----RLEVGTETIID--------------------------KSKSVKTNLMQLFE 121 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE-----EEEEECSCCSC--------------------------SSSCHHHHHGGGTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEccCCcc--------------------------cCccHHHHHHHHHh
Confidence 468999999999999999877665 77888754321 01223456664444
Q ss_pred ---CCC-CccccccchhhHHHHHHHHHHHHHcCC--CCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCC
Q 018076 209 ---FQG-PNHAAVTACATGAHSIGDAARMIQFGD--SDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (361)
Q Consensus 209 ---l~G-~~~~v~~acasgl~Al~~A~~~I~~G~--~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 282 (361)
+.+ +++.|..+|++++.||..|..+|++|. .+.|||+|+|.. . |..
T Consensus 122 ~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia----------------~------------~~~ 173 (478)
T 2p8u_A 122 ESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIA----------------V------------YAT 173 (478)
T ss_dssp TTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE----------------C------------CCS
T ss_pred hcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeeee----------------c------------ccC
Confidence 333 678899999999999999999999999 999999999931 0 111
Q ss_pred CCCcccccceeeeEeeCCh
Q 018076 283 GRDGFVIGEGSGVLVLEEL 301 (361)
Q Consensus 283 ~~~G~v~gEGAaalvL~~~ 301 (361)
.....+.||||+|+||++.
T Consensus 174 ~~~~~~fGdGA~A~Ll~~~ 192 (478)
T 2p8u_A 174 GNARPTGGVGAVALLIGPN 192 (478)
T ss_dssp STTGGGCEEEEEEEEEESS
T ss_pred CCCCCcccceeEEEEEecC
Confidence 2235789999999999864
|
| >3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.29 E-value=3e-11 Score=115.59 Aligned_cols=119 Identities=18% Similarity=0.103 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHc
Q 018076 128 RFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKY 207 (361)
Q Consensus 128 ~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l 207 (361)
....|+.+|+++||+++|+++++++ .|++++..+ +. . ...+..++..+
T Consensus 136 ~~~~La~~Aa~~AL~~agi~~~dId-----~li~~t~t~----------------------~~----~-P~~a~~v~~~L 183 (413)
T 3v7i_A 136 AVQAYGERAARGALQIAGLDVADVD-----CLITSNSTT----------------------PA----L-PGLDVALANRL 183 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECCSS----------------------CC----S-SCHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhCcCHHHCC-----EEEEEccCC----------------------CC----c-CHHHHHHHHHh
Confidence 4567999999999999999998888 899998542 11 1 23466889999
Q ss_pred CCCC--Ccccc-ccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC
Q 018076 208 GFQG--PNHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR 284 (361)
Q Consensus 208 gl~G--~~~~v-~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~ 284 (361)
|+.. +.+.+ ..+|++++.||..|.++|++|.++.|||+|+|.. +.. ..| +.+.
T Consensus 184 Gl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~-S~~----------------------~~~-~d~~ 239 (413)
T 3v7i_A 184 PLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEAL-STT----------------------YQP-ADDT 239 (413)
T ss_dssp TCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECG-GGG----------------------CCS-SCCS
T ss_pred CCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecc-ccc----------------------cCc-cccc
Confidence 9986 34667 9999999999999999999999999999999972 111 111 1112
Q ss_pred C-----cccccceeeeEeeCChh
Q 018076 285 D-----GFVIGEGSGVLVLEELE 302 (361)
Q Consensus 285 ~-----G~v~gEGAaalvL~~~~ 302 (361)
. ..++||||+|+||++.+
T Consensus 240 ~~~lv~~~LFGDGAaAvvl~~~~ 262 (413)
T 3v7i_A 240 LESLIVRLLFADTAVAAVVTGRP 262 (413)
T ss_dssp TTHHHHHHHBCCEEEEEEEESSC
T ss_pred hhhhhcceeeccccEEEEEEecC
Confidence 2 67899999999998754
|
| >2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.24 E-value=1e-11 Score=120.86 Aligned_cols=114 Identities=12% Similarity=0.106 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|++.|+++||+++|+++++++ .|+++|..+.. . ....+..|...|+
T Consensus 54 ~~~ma~~Aa~~al~~a~i~~~~Id-----~ii~aT~t~~~---------------------~-----~ps~a~~v~~~l~ 102 (460)
T 2wya_A 54 INSLCLTVVQRLMERIQLPWDSVG-----RLEVGTETIID---------------------K-----SKAVKTVLMELFQ 102 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE-----EEEEECSCCSC---------------------S-----SSCHHHHHGGGTG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeCCCCC---------------------C-----CCchHHHHHHHHh
Confidence 356999999999999999877665 68888854321 1 1124556777787
Q ss_pred CCC----CccccccchhhHHHHHHHHHHHHHcCCCC--EEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCC
Q 018076 209 FQG----PNHAAVTACATGAHSIGDAARMIQFGDSD--VMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDC 282 (361)
Q Consensus 209 l~G----~~~~v~~acasgl~Al~~A~~~I~~G~~d--~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~ 282 (361)
+.| .++.+..+|+++++||..|..+|++|..+ .+|+++.+. +. |..
T Consensus 103 ~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~----------------~~------------~~d 154 (460)
T 2wya_A 103 DSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI----------------AV------------YPS 154 (460)
T ss_dssp GGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE----------------EC------------CCS
T ss_pred ccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc----------------cc------------ccc
Confidence 654 35779999999999999999999999876 344444432 10 222
Q ss_pred CCCcccccceeeeEeeCCh
Q 018076 283 GRDGFVIGEGSGVLVLEEL 301 (361)
Q Consensus 283 ~~~G~v~gEGAaalvL~~~ 301 (361)
.......|+||++++++..
T Consensus 155 ~~~~~~~GdGA~A~l~~~~ 173 (460)
T 2wya_A 155 GNARPTGGAGAVAMLIGPK 173 (460)
T ss_dssp STTGGGCEEEEEEEEEESS
T ss_pred ccccccCcchHHhhhcccC
Confidence 3445678999999999864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 361 | ||||
| d2ix4a1 | 270 | c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II | 1e-67 | |
| d1j3na1 | 249 | c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { | 2e-65 | |
| d2gfva1 | 250 | c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { | 4e-60 | |
| d1ox0a1 | 256 | c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II | 2e-51 | |
| d2vbaa1 | 253 | c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E | 5e-51 | |
| d1e5ma1 | 250 | c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { | 6e-49 | |
| d1tqya1 | 216 | c.95.1.1 (A:3-218) Actinorhodin polyketide putativ | 2e-31 | |
| d1tqyb1 | 208 | c.95.1.1 (B:2-209) Actinorhodin polyketide putativ | 2e-27 | |
| d1tqya2 | 205 | c.95.1.1 (A:219-423) Actinorhodin polyketide putat | 2e-17 | |
| d1tqyb2 | 194 | c.95.1.1 (B:210-403) Actinorhodin polyketide putat | 1e-14 | |
| d2ix4a2 | 161 | c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II | 4e-10 | |
| d1e5ma2 | 161 | c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II | 9e-10 | |
| d1ox0a2 | 158 | c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II | 2e-09 | |
| d1j3na2 | 159 | c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II | 9e-09 | |
| d2gfva2 | 161 | c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II | 1e-08 | |
| d2vbaa2 | 151 | c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I | 2e-07 |
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 212 bits (539), Expect = 1e-67
Identities = 211/273 (77%), Positives = 242/273 (88%), Gaps = 3/273 (1%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+GMVTPLG G ETTWRRLI GECGIR +T +DLKM +FD ET+L+ F QL+SK
Sbjct: 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSK 60
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
VAA VP G + GEF+E W + +++A FI YA+CAADEAL DA+WLP+++ +KERTG
Sbjct: 61 VAAFVPYGSNPGEFDEALW---LNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTG 117
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
VSIGGGIGSI D V+AAQ+ICEKRLRRLSPFFIP+IL+NMASGHVSMKYGFQGPNHAAVT
Sbjct: 118 VSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVT 177
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
ACATGAHSIGDA RMIQFGD+DVMVAGGTESSIDALS+AGF +SRAL+TK+N +PQEASR
Sbjct: 178 ACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASR 237
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKI 311
PFDC RDGFVIGEGSGV+VLEE EHAK+RGAKI
Sbjct: 238 PFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 205 bits (523), Expect = 2e-65
Identities = 121/272 (44%), Positives = 169/272 (62%), Gaps = 23/272 (8%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
+RRVVVTG+G +TP+G G E + + G+ G+R IT D L
Sbjct: 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFDA--------------SALPV 46
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
++AA V + ++L+ K+ R + RF+ YAL AA AL DA P D ER
Sbjct: 47 RIAAEVDV-------DPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDL-DPERV 98
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
G +G GIG + +++ E+ R+SPFFIP ++ NMAS H++M+YGF GP+ V
Sbjct: 99 GTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVV 158
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TACATGA ++G A RMIQ G++D+++AGGTE++I +++ F RAL+T+ N P++AS
Sbjct: 159 TACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKAS 217
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309
RPF RDGFV+GEG+GVLVLE EHAKKRGA
Sbjct: 218 RPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGA 249
|
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 192 bits (488), Expect = 4e-60
Identities = 109/271 (40%), Positives = 158/271 (58%), Gaps = 22/271 (8%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVVVTG+GM++P+G E+TW+ L+ G+ GI I D
Sbjct: 2 RRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS------------------- 42
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
A +FN + ++ K+ R + FI Y + A +A+ D L + R G
Sbjct: 43 -AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQD-SGLEITEENATRIG 100
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
+IG GIG + + + R++SPFF+P ++NM +GH+++ YG +GP+ + T
Sbjct: 101 AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIAT 160
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
A +G H+IG AAR+I +GD+DVMVAGG E + L + GF +RAL+T+ N PQ ASR
Sbjct: 161 AQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASR 219
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309
P+D RDGFV+G+G+G+LVLEE EHAKKRGA
Sbjct: 220 PWDKERDGFVLGDGAGMLVLEEYEHAKKRGA 250
|
| >d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 170 bits (430), Expect = 2e-51
Identities = 111/272 (40%), Positives = 149/272 (54%), Gaps = 23/272 (8%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
L RVVVTG G+ +P+G E W L G+ GI IT D +FD
Sbjct: 8 LNRVVVTGYGVTSPIGNTPEEFWNSLATGKIGIGGITKFD--HSDFD------------- 52
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
V +F D + KD + YAL AA EA++ A L + ++R
Sbjct: 53 -----VHNAAEIQDFPFDKYFVKKDTNRFDNYSLYALYAAQEAVNHA-NLDVEALNRDRF 106
Query: 158 GVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAV 217
GV + GIG I + D + EK +R+ P +P+ L NMASG+V+M++G G +
Sbjct: 107 GVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSIN 166
Query: 218 TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277
TAC++ +IGDA R I+FG DVM+ GGTE+SI ++AGF AL+T P AS
Sbjct: 167 TACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRAS 224
Query: 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309
PFD R+GFV+GEGSG+LVLE LEHA+KRGA
Sbjct: 225 IPFDKDRNGFVMGEGSGMLVLESLEHAEKRGA 256
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 168 bits (426), Expect = 5e-51
Identities = 84/275 (30%), Positives = 129/275 (46%), Gaps = 23/275 (8%)
Query: 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTS 97
++R V+TG+G+V+ +G + L G GI + S
Sbjct: 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDS--------------GMRS 46
Query: 98 KVAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERT 157
V V + ++ K R ++ YA + ++A+ DA P R
Sbjct: 47 HVWGNVKL-------DTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRV 99
Query: 158 GVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAA 216
G+ G G GS V A + + L+ + P+ + + + + S ++ + G N++
Sbjct: 100 GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSI 159
Query: 217 VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276
+ACAT AH IG+A IQ G D++ AGG E + F AL+TKYN TP++A
Sbjct: 160 SSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LCWEMACEFDAMGALSTKYNDTPEKA 218
Query: 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKI 311
SR +D RDGFVI G G++V+EELEHA RGA I
Sbjct: 219 SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHI 253
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 163 bits (412), Expect = 6e-49
Identities = 110/271 (40%), Positives = 158/271 (58%), Gaps = 22/271 (8%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
+RVVVTG+G +TP+G + W+ L+ G GI IT D +
Sbjct: 2 KRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFDA--------------SDQACR 47
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
V F+ +L+ K+ + + RF +A+CA+ +A++DAK + ++ + G
Sbjct: 48 FGGEVKD------FDATQFLDRKEAKRMDRFCHFAVCASQQAINDAKLVINEL-NADEIG 100
Query: 159 VSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVT 218
V IG GIG + D ++ +K R SPF IP ++ NMASG ++ G +GPN+ VT
Sbjct: 101 VLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVT 160
Query: 219 ACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278
ACA G+++IGDA R++Q G + M+ GGTE++I LS AGF +RAL+ N P ASR
Sbjct: 161 ACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSF-RNDDPLHASR 219
Query: 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309
PFD RDGFV+GEGSG+L+LEELE A RGA
Sbjct: 220 PFDKDRDGFVMGEGSGILILEELESALARGA 250
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 115 bits (289), Expect = 2e-31
Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 27/236 (11%)
Query: 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSK 98
RRVV+TG+G+ P G G W L G R I+ D +
Sbjct: 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFDPSPYRSQVAAEAD-------- 52
Query: 99 VAAVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTG 158
++ + R +A+ A EA + P D R G
Sbjct: 53 ------------FDPVAEGFGPRELDRMDRASQFAVACAREAFAASGLDP-DTLDPARVG 99
Query: 159 VSIGGGIGSISDTVDAAQMIC------EKRLRRLSPFFIPRILINMASGHVSMKYGFQGP 212
VS+G + + + ++ E LS ++ ++ V+ G +GP
Sbjct: 100 VSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGP 159
Query: 213 NHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTK 268
T C +G S+G+A R I+ G +DVM AG ++ I + +A F RA T +
Sbjct: 160 VTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTAR 215
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 105 bits (261), Expect = 2e-27
Identities = 44/227 (19%), Positives = 84/227 (37%), Gaps = 22/227 (9%)
Query: 41 VVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVA 100
V++TG+G+V P G G W ++ G G+ +T D+ Q+ F
Sbjct: 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFDVSRYPATLAGQIDDFHA------ 55
Query: 101 AVVPCGISSGEFNEDSWLNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVS 160
P I + + + A + GV
Sbjct: 56 ---PDHIPGRLLPQTDPSTRLALTAADWALQDA------------KADPESLTDYDMGVV 100
Query: 161 IGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGFQGPNHAAVTAC 220
G T + + + + +S + + +G +S+++G +GP+ A V
Sbjct: 101 TANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQ 160
Query: 221 ATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 267
A G ++G A R I+ G + ++V+GG +S++D S ++T
Sbjct: 161 AGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Score = 77.9 bits (191), Expect = 2e-17
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 272 TPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPH 331
P+ ASRPFD RDGFV+ EG+ + VLE+ + A RGA+I+AE+ GY +A+H+T
Sbjct: 2 DPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLK 61
Query: 332 IDGKGAILAMTRALKQVVHNVD 353
DG+ + AL + +
Sbjct: 62 ADGREMAETIRVALDESRTDAT 83
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Score = 69.6 bits (169), Expect = 1e-14
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAK-IYAEVRGYGMSGDAHHITQPH 331
P A PFD G+V GEG +LVLE+ A+ RG Y E+ G + D +
Sbjct: 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGRP 61
|
| >d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Score = 55.5 bits (133), Expect = 4e-10
Identities = 30/42 (71%), Positives = 34/42 (80%)
Query: 312 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVD 353
YAE+ GYGMSGDAHHITQP DGKGA+LAMTRAL+Q +
Sbjct: 1 YAELCGYGMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPN 42
|
| >d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Score = 54.8 bits (131), Expect = 9e-10
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 310 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347
KIY E+ GY M+ DA+HIT P DG+GA A+ ALK
Sbjct: 1 KIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKD 38
|
| >d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Streptococcus pneumoniae [TaxId: 1313]
Score = 54.0 bits (129), Expect = 2e-09
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 311 IYAEVRGYGMSGDAHHITQPHIDGKGAILAMTR 343
I AEV GYG + DA+H+T PH +G+GAI A+
Sbjct: 2 ILAEVVGYGNTCDAYHMTSPHPEGQGAIKAIKL 34
|
| >d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Score = 51.7 bits (123), Expect = 9e-09
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 310 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAM 341
+IYAE+ G+G S DAHHIT+PH +GKGA LAM
Sbjct: 1 RIYAELVGFGRSADAHHITEPHPEGKGAALAM 32
|
| >d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Score = 51.7 bits (123), Expect = 1e-08
Identities = 22/38 (57%), Positives = 28/38 (73%)
Query: 310 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQ 347
KIYAE+ G+GMS DA+H+T P +G GA LAM AL+
Sbjct: 1 KIYAELVGFGMSSDAYHMTSPPENGAGAALAMANALRD 38
|
| >d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Score = 47.5 bits (112), Expect = 2e-07
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 312 YAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFE 356
YAE+ GYG + D + P G+GA+ M A+ V +D
Sbjct: 1 YAEIVGYGATSDGADMVAPS--GEGAVRCMKMAMHGVDTPIDYLN 43
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| d1ox0a1 | 256 | Beta-ketoacyl-ACP synthase II {Streptococcus pneum | 100.0 | |
| d2gfva1 | 250 | Beta-ketoacyl-ACP synthase II {Escherichia coli [T | 100.0 | |
| d1j3na1 | 249 | Beta-ketoacyl-ACP synthase II {Thermus thermophilu | 100.0 | |
| d1e5ma1 | 250 | Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ | 100.0 | |
| d2vbaa1 | 253 | Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta | 100.0 | |
| d2ix4a1 | 270 | Beta-ketoacyl-ACP synthase II {Thale cress (Arabid | 100.0 | |
| d1tqyb1 | 208 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya1 | 216 | Actinorhodin polyketide putative beta-ketoacyl syn | 100.0 | |
| d1tqya2 | 205 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.79 | |
| d1tqyb2 | 194 | Actinorhodin polyketide putative beta-ketoacyl syn | 99.73 | |
| d1teda_ | 372 | Polyketide synthase PKS18 {Mycobacterium tuberculo | 99.51 | |
| d1ub7a1 | 172 | Ketoacyl-ACP synthase III (FabH) {Thermus thermoph | 99.39 | |
| d1u6ea1 | 184 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 99.37 | |
| d1hnja1 | 174 | Ketoacyl-ACP synthase III (FabH) {Escherichia coli | 99.37 | |
| d1mzja1 | 181 | Priming beta-ketosynthase from the r1128 polyketid | 99.34 | |
| d1m3ka1 | 268 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 99.14 | |
| d1ulqa1 | 273 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 99.12 | |
| d1u0ma1 | 200 | Putative polyketide synthase SCO1206 {Streptomyces | 99.06 | |
| d1wdkc1 | 262 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 99.01 | |
| d1bi5a1 | 235 | Chalcone synthase {Alfalfa (Medicago sativa) [TaxI | 98.95 | |
| d1xpma1 | 166 | 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap | 98.9 | |
| d1afwa1 | 269 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 98.58 | |
| d1afwa2 | 124 | Thiolase {Baker's yeast (Saccharomyces cerevisiae) | 97.74 | |
| d1wdkc2 | 128 | Fatty oxidation complex beta subunit (3-ketoacyl-C | 97.6 | |
| d1ulqa2 | 125 | Beta-ketoadipyl CoA thiolase {Thermus thermophilus | 97.5 | |
| d1m3ka2 | 124 | Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 | 97.46 | |
| d1u6ea2 | 148 | Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu | 81.79 |
| >d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.3e-50 Score=362.43 Aligned_cols=250 Identities=44% Similarity=0.793 Sum_probs=232.1
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.+||||||||+++|+|.+.++||++|++|+++|++++.++ ...++.++++.+++ |+...+
T Consensus 1 ~rrVaItG~G~vtp~G~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~~~v~~------~~~~~~ 60 (250)
T d2gfva1 1 KRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFD--------------TSAYATKFAGLVKD------FNCEDI 60 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTCSCCEEECCTT------CCCTTT
T ss_pred CCeEEEECCeeECCCcCCHHHHHHHHHcCCCeeecCCccc--------------ccccCCccceeccc------chhhhh
Confidence 3789999999999999999999999999999999998765 45667788999987 777667
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.++++|+++|++.++.+||++||+...+.. ..++||++|++.+.....+..+..+...++..+.+..+++.+++
T Consensus 61 ~~~~~~~~~d~~~~~~l~aa~~Al~dAg~~~~~~~-~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (250)
T d2gfva1 61 ISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEEN-ATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVN 139 (250)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred hhhHHHhhcCHHHHHHHHHHHHHHHhcCCCccccC-ccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhh
Confidence 88899999999999999999999999999887764 88999999999999999999999888889999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++|++.||++||+++|+++|+||+.||.+|+++|++|++|++||||+|..++|+.+..|..++.++.. +.+|.+.|
T Consensus 140 ~~a~~ia~~~gl~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~-~~~p~~~~ 218 (250)
T d2gfva1 140 MVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAAS 218 (250)
T ss_dssp HHHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHC
T ss_pred HHHHHHHHHhCCCCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhcccccCC-CCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999998999999999999999964 44566789
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCC
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~ 309 (361)
||||.+++|+++|||+++||||++++|++||+
T Consensus 219 rPFD~~rdG~v~gEGaa~lVLE~~~~A~~rGA 250 (250)
T d2gfva1 219 RPWDKERDGFVLGDGAGMLVLEEYEHAKKRGA 250 (250)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTC
T ss_pred CCCCCCCCCEeeeeEEEEEEECcHHHHHHCcC
Confidence 99999999999999999999999999999985
|
| >d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.9e-50 Score=361.49 Aligned_cols=249 Identities=49% Similarity=0.838 Sum_probs=227.3
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|+||||||||+++|+|.+.++||++|.+|+++|.++++++ ...++..+.+..+ +++..+
T Consensus 1 M~rVaItG~G~vsp~g~~~~e~w~~l~~G~s~i~~~~~~~--------------~~~~~~~~~~~~~-------~~~~~~ 59 (249)
T d1j3na1 1 MRRVVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPITRFD--------------ASALPVRIAAEVD-------VDPGAY 59 (249)
T ss_dssp CCCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECCC-------CCGGGT
T ss_pred CCcEEEECCEeECCCcCCHHHHHHHHHcCCCccccCCccc--------------cccCCcccccccc-------cccccc
Confidence 6789999999999999999999999999999999998765 3345555555554 455566
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
+++++.+.+++++++++.++.+||+|||++.+++. ..++||++|++.++............+.+...+.++.+.+.+.+
T Consensus 60 ~~~~~~~~~d~~~~~~l~aa~~Al~dAGl~~~~~~-~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (249)
T d1j3na1 60 LDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLD-PERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIAN 138 (249)
T ss_dssp SCHHHHTTSCHHHHHHHHHHHHHHHHHTCCGGGSC-GGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred ccHHHHhhCCHHHHHHHHHHHHHHHHcCCChhHcC-CccEEEEEEECCCcccccccccccccccCccccChhhhccccch
Confidence 78899999999999999999999999999987774 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++|+..||++||+++|+++|+|++.||.+|+++|++|++|++||||+|..+.|..+..|..++.|++. +..|++.|
T Consensus 139 ~~~~~is~~~gl~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~~~ls~~-~~~p~~~~ 217 (249)
T d1j3na1 139 MASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKAS 217 (249)
T ss_dssp HHHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCHHHHC
T ss_pred hhhhhhHhhcCCCCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhCCcccCC-CCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999863 34456789
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCC
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~ 309 (361)
+|||.+++|+++||||+++|||++++|++||+
T Consensus 218 rPFd~~~dG~v~gEGa~~lvLe~~~~A~~rGA 249 (249)
T d1j3na1 218 RPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGA 249 (249)
T ss_dssp CTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred CCccCCCCCEeeEeEEEEEEEccHHHHHHCcC
Confidence 99999999999999999999999999999985
|
| >d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Synechocystis sp. [TaxId: 1143]
Probab=100.00 E-value=5.3e-48 Score=346.90 Aligned_cols=250 Identities=44% Similarity=0.760 Sum_probs=231.2
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
.+||||||||+++|+|.+.++||++|++|+++|.+++.++ ...++..+.+.++. ++....
T Consensus 1 ~~rVaItG~G~v~p~G~~~~~~w~~L~~G~~~i~~~~~~~--------------~~~~~~~~~g~~~~------~~~~~~ 60 (250)
T d1e5ma1 1 KKRVVVTGLGAITPIGNTLQDYWQGLMEGRNGIGPITRFD--------------ASDQACRFGGEVKD------FDATQF 60 (250)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHTTCCCEEECCSSC--------------CTTSSCCEEECCCS------CCGGGT
T ss_pred CCeEEEECCeeECCCCCCHHHHHHHHHcCCCeeccCCccc--------------cccccccccceeee------cccccc
Confidence 4799999999999999999999999999999999998766 45667777888875 555555
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILIN 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (361)
++++..+.+++++++++.++.+||++||+....+. ..++++++|++.+....+...+..+.+.++....++.+...+.+
T Consensus 61 ~~~~~~~~~d~~~~~~~~a~~~Al~~Agl~~~~~~-~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (250)
T d1e5ma1 61 LDRKEAKRMDRFCHFAVCASQQAINDAKLVINELN-ADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIAN 139 (250)
T ss_dssp SCHHHHHTSCHHHHHHHHHHHHHHHHHTCCCCTTT-GGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTT
T ss_pred cchhhhhhcCcHHHHHHHHHHHHHHHcCCChHhhc-CCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcc
Confidence 88899999999999999999999999999987764 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCC
Q 018076 198 MASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEAS 277 (361)
Q Consensus 198 ~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~ 277 (361)
.++++++..||++||+++|+++|+|++.||.+|+++|++|++|.+||||+|..+++..+..|.+++.++.. +.+|++.|
T Consensus 140 ~~a~~is~~~gl~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~~~ls~~-~~~p~~~~ 218 (250)
T d1e5ma1 140 MASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHAS 218 (250)
T ss_dssp HHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCC-TTCGGGTC
T ss_pred hhhhhHHHhccCCCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhcCCccCC-CCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999998999999999999999863 55677889
Q ss_pred cCCCCCCCcccccceeeeEeeCChhhHHhcCC
Q 018076 278 RPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA 309 (361)
Q Consensus 278 ~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~ 309 (361)
||||.+++||++||||++||||++++|++||+
T Consensus 219 rPFD~~~dG~~~gEGa~~~vLe~l~~A~~rGA 250 (250)
T d1e5ma1 219 RPFDKDRDGFVMGEGSGILILEELESALARGA 250 (250)
T ss_dssp CTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred CCCCCCCCCEeeEeeEEEEEEeeHHHHHHCcC
Confidence 99999999999999999999999999999985
|
| >d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase I species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=3.2e-46 Score=335.77 Aligned_cols=252 Identities=33% Similarity=0.516 Sum_probs=219.4
Q ss_pred CCceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC
Q 018076 38 LRRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW 117 (361)
Q Consensus 38 ~~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~ 117 (361)
|+||||||||+++|+|.+.++||++|++|+++|.+++.++ ...++....+.+. +....+
T Consensus 1 m~RVvITG~G~i~p~G~~~~~~w~~L~~G~sgi~~~~~~~--------------~~~~~~~~~~~~~-------~~~~~~ 59 (253)
T d2vbaa1 1 MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELK--------------DSGMRSHVWGNVK-------LDTTGL 59 (253)
T ss_dssp CCCEEEEEEEEEBTTBSSHHHHHHHHHHTCCCEEECHHHH--------------HTTCSCCEEECCC-------CCCTTS
T ss_pred CCcEEEEccEEECCCCCCHHHHHHHHHcCCCccccCCccc--------------cccCccccccccc-------cccccc
Confidence 6799999999999999999999999999999999988765 3344555555554 344455
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHH-HhccCCCCCcchhhhhh
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMIC-EKRLRRLSPFFIPRILI 196 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 196 (361)
++....+.+++..++.+.++.+|+.++++......+..++|+++|+..++.......+..+. ..+...+.|+.++..+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (253)
T d2vbaa1 60 IDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMA 139 (253)
T ss_dssp SCHHHHTTCCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHST
T ss_pred ccchhhccchhhhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhcccc
Confidence 77888999999999999999999999999754433578999999999998877666555443 33456678889999999
Q ss_pred hHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCC
Q 018076 197 NMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEA 276 (361)
Q Consensus 197 ~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~ 276 (361)
+.++++|++.||++||+++|+++|+||+.||.+|+++|++|++|++||||+|. +.+..+..|..++.++..++.+|++.
T Consensus 140 ~~~a~~is~~~g~~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~-~~~~~~~~~~~~~~ls~~~~~~P~~~ 218 (253)
T d2vbaa1 140 SGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LCWEMACEFDAMGALSTKYNDTPEKA 218 (253)
T ss_dssp THHHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBCCSCTTSGGGS
T ss_pred ccccceeccccCcccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhh-hhcchhhhHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999997 66667788999999998777788999
Q ss_pred CcCCCCCCCcccccceeeeEeeCChhhHHhcCCee
Q 018076 277 SRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKI 311 (361)
Q Consensus 277 ~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~ 311 (361)
|||||.+++||++|||++++|||++++|++||++|
T Consensus 219 ~rPFD~~~~G~v~gEGa~~lvLe~le~A~~rGa~I 253 (253)
T d2vbaa1 219 SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHI 253 (253)
T ss_dssp CCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCCCCEeeeeEEEEEEEccHHHHHHccCcC
Confidence 99999999999999999999999999999999986
|
| >d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoacyl-ACP synthase II species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]
Probab=100.00 E-value=2.2e-45 Score=333.03 Aligned_cols=270 Identities=78% Similarity=1.239 Sum_probs=232.1
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCC
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWL 118 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~ 118 (361)
+||||||||+++|+|.++++||++|++|+++|.+++..+|....|+++...+.....+.+++++++.......|+...
T Consensus 1 rRVvITG~G~vsP~G~~~ee~w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 78 (270)
T d2ix4a1 1 RRVVVTGLGMVTPLGRGVETTWRRLIDGECGIRGLTLDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEFDEAL-- 78 (270)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHTTCCCEEECCGGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSBCHHH--
T ss_pred CeEEEECceeECCCcCCHHHHHHHHHcCCCeeccCChhhcccccccccccccccccccceeeeecccccCchhhhHHH--
Confidence 589999999999999999999999999999999999999998888776655545566777888887632222233222
Q ss_pred CchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhH
Q 018076 119 NSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINM 198 (361)
Q Consensus 119 ~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (361)
......+++....+..+..+|+.+++....+.....+.++.++...+.....................++.+++.+.++
T Consensus 79 -~~~~~~~~~~~~~a~~a~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (270)
T d2ix4a1 79 -WLNSKAVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNM 157 (270)
T ss_dssp -HSCSTTCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTH
T ss_pred -hhhhhhhhhhHHHHHHHHHHHHHHhhhccccccccccceEEeeccccccccchhhcchhhhccccccCcccCcccccch
Confidence 1234567788888899999999999876543222456788888877777777777777777788889999999999999
Q ss_pred HHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCc
Q 018076 199 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASR 278 (361)
Q Consensus 199 ~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~ 278 (361)
++++|++.||++||+++|+++|+|++.||.+|+++|++|+||++||||++..+.|..+..|..++.|++..+..|+..||
T Consensus 158 ~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~~~ls~~~~~~p~~~~r 237 (270)
T d2ix4a1 158 ASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALSTKFNSSPQEASR 237 (270)
T ss_dssp HHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCCTTTTCGGGSCC
T ss_pred hHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhcccccCCCCCCCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999876677889999
Q ss_pred CCCCCCCcccccceeeeEeeCChhhHHhcCCee
Q 018076 279 PFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKI 311 (361)
Q Consensus 279 pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~ 311 (361)
|||.+++||++||||+++|||++++|++||++|
T Consensus 238 PFD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I 270 (270)
T d2ix4a1 238 PFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI 270 (270)
T ss_dssp TTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred CCCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence 999999999999999999999999999999986
|
| >d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=2.1e-38 Score=276.26 Aligned_cols=205 Identities=25% Similarity=0.386 Sum_probs=192.0
Q ss_pred eEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCCCCc
Q 018076 41 VVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSWLNS 120 (361)
Q Consensus 41 v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~~~~ 120 (361)
|||||||+++|+|.++++||++|++|++++.+++.++ ...++.++++++++ |++..++++
T Consensus 2 VvITG~G~vsp~g~~~~~~w~~L~~G~sgi~~~~~~~--------------~~~~~~~~~~~~~~------~~~~~~~~~ 61 (208)
T d1tqyb1 2 VLITGVGVVAPNGLGLAPYWSAVLDGRHGLGPVTRFD--------------VSRYPATLAGQIDD------FHAPDHIPG 61 (208)
T ss_dssp EEEEEEEEEETTEESHHHHHHHHHTTCCCEEECTTTT--------------GGGSSCCEEECCCS------CCHHHHSCT
T ss_pred EEEEcceeECCCcCCHHHHHHHHHcCCCceecCcccC--------------chhccccccccccc------ccccccCCh
Confidence 8999999999999999999999999999999998765 44567788888876 777767889
Q ss_pred hhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHH
Q 018076 121 KDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMAS 200 (361)
Q Consensus 121 ~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 200 (361)
++.+.|+|.+++++.++.+||++||+++.++. ..++++++|++.++.+..++.+..+...+++...|+.+++.++++++
T Consensus 62 ~~~~~~~~~~~~~~~a~~~Al~~Ag~~~~~~~-~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a 140 (208)
T d1tqyb1 62 RLLPQTDPSTRLALTAADWALQDAKADPESLT-DYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNT 140 (208)
T ss_dssp TTGGGCCHHHHHHHHHHHHHHHHTTCCGGGSC-GGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHH
T ss_pred hHhhccccccccccccccccchhhhccccccc-ccccccccccccccccccchhhhhhcccccccccccccccccccccc
Confidence 99999999999999999999999999887764 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccc
Q 018076 201 GHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 267 (361)
Q Consensus 201 ~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~ 267 (361)
++|+..||++||+++|+++|+|++.||..|+++|++| +|++||||+|..++|+.+.+|.++++||+
T Consensus 141 ~~ia~~~gl~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~~~lSt 206 (208)
T d1tqyb1 141 GQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIST 206 (208)
T ss_dssp HHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBCC
T ss_pred chhhhcccccceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999999999999999999 99999999999899999999999999985
|
| >d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=1.2e-36 Score=266.47 Aligned_cols=207 Identities=28% Similarity=0.442 Sum_probs=183.7
Q ss_pred CceEEEeeceeCCCCCCHHHHHHHHHcCCCceeeCCccccccCCCccchhccccCCCcceeeEEeCCCCCCCCCCCCCC-
Q 018076 39 RRVVVTGIGMVTPLGCGAETTWRRLIVGECGIREITPEDLKMGNFDRETQLHAFGQLTSKVAAVVPCGISSGEFNEDSW- 117 (361)
Q Consensus 39 ~~v~ItG~g~~~p~g~~~~~~~~~l~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~fd~~~~- 117 (361)
+||||||||+++|+|.++++||++|++|+++|++++.++ +..+...+....+ |+...+
T Consensus 1 rRVvItG~G~v~p~G~~~~~~w~~L~~G~s~i~~~~~~~--------------~~~~~~~~~~~~~-------~~~~~~~ 59 (216)
T d1tqya1 1 RRVVITGVGVRAPGGNGTRQFWELLTSGRTATRRISFFD--------------PSPYRSQVAAEAD-------FDPVAEG 59 (216)
T ss_dssp CCEEEEEEEEEETTEESHHHHHHHHHHTCCCEEECCSSC--------------CTTSSCCEEECCC-------CCHHHHT
T ss_pred CeEEEEeceeECCCCCCHHHHHHHHHcCCCEeecCCccC--------------CCccccccccccc-------ccccccc
Confidence 589999999999999999999999999999999998765 3334444444444 454433
Q ss_pred CCchhhcccCHHHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhcc------CCCCCcch
Q 018076 118 LNSKDHRSIARFIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRL------RRLSPFFI 191 (361)
Q Consensus 118 ~~~~~~~~~~~~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~------~~~~~~~~ 191 (361)
+++++.+.+++.++|++.++.+||+|||+++.+.. ..+++++++++.++....+..+..+...+. ....++.+
T Consensus 60 ~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (216)
T d1tqya1 60 FGPRELDRMDRASQFAVACAREAFAASGLDPDTLD-PARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMF 138 (216)
T ss_dssp CCHHHHHHSCHHHHHHHHHHHHHHHHHTCCTTTCC-GGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTH
T ss_pred cChhhhcccCcchhhHHHHHHHHHHHhcCCccccc-cccccccccccccccchhhHHHhhhhhcccccccchhhcccccc
Confidence 89999999999999999999999999999987764 789999999999999999999888876643 34567788
Q ss_pred hhhhhhHHHHHHHHHcCCCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccc
Q 018076 192 PRILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTT 267 (361)
Q Consensus 192 ~~~~~~~~a~~is~~lgl~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~ 267 (361)
+..+++.++++|++.||++||+++++++|+|++.||.+|+++|++|++|++||||+|..++|..+.+|.++++||+
T Consensus 139 ~~~~~~~~a~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~~alS~ 214 (216)
T d1tqya1 139 DYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIRATTA 214 (216)
T ss_dssp HHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBCC
T ss_pred cccCchHHHHHHHHhcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHCCCCCc
Confidence 8889999999999999999999999999999999999999999999999999999999899999999999999995
|
| >d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.79 E-value=7.5e-20 Score=157.14 Aligned_cols=91 Identities=36% Similarity=0.620 Sum_probs=87.5
Q ss_pred CCCCCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCC
Q 018076 271 GTPQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVH 350 (361)
Q Consensus 271 ~~~~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl 350 (361)
++|++.|||||.+++||++|||++++|||+.++|+++|++||++|.|++.++++.+.+.+.+++..+.++++++|+++++
T Consensus 1 ~~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i 80 (205)
T d1tqya2 1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRT 80 (205)
T ss_dssp SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcC
Confidence 35889999999999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred CCCCcceeecC
Q 018076 351 NVDGFEQLSIQ 361 (361)
Q Consensus 351 ~~~dId~ie~~ 361 (361)
+|+||+|||.|
T Consensus 81 ~~~~i~~ie~h 91 (205)
T d1tqya2 81 DATDIDYINAH 91 (205)
T ss_dssp CGGGCCEEECC
T ss_pred Cccceeeeecc
Confidence 99999999976
|
| >d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.73 E-value=2e-18 Score=146.74 Aligned_cols=86 Identities=29% Similarity=0.402 Sum_probs=77.8
Q ss_pred CCCCCcCCCCCCCcccccceeeeEeeCChhhHHhcCC-eeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCC
Q 018076 273 PQEASRPFDCGRDGFVIGEGSGVLVLEELEHAKKRGA-KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHN 351 (361)
Q Consensus 273 ~~~~~~pfd~~~~G~v~gEGAaalvL~~~~~A~~~g~-~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~ 351 (361)
|++.|||||.+++||++|||++++|||++++|++||+ +||++|.|++.++|+.+.+ +.+.+ ++++|++||+++|++
T Consensus 2 p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~~~~d~~~~~-~~~~g--~~~~i~~aL~~a~i~ 78 (194)
T d1tqyb2 2 PDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGS-GRPAG--LERAIRLALNDAGTG 78 (194)
T ss_dssp GGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEEEEECCCTTC-CCCCS--HHHHHHHHHHHHTCC
T ss_pred CCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeecccccccccccc-cchhh--hhhhhhhhccccccc
Confidence 7789999999999999999999999999999999997 6999999999999987654 34444 589999999999999
Q ss_pred CCCcceeecC
Q 018076 352 VDGFEQLSIQ 361 (361)
Q Consensus 352 ~~dId~ie~~ 361 (361)
|+||+|||-|
T Consensus 79 ~~di~~v~ah 88 (194)
T d1tqyb2 79 PEDVDVVFAD 88 (194)
T ss_dssp GGGCCEEECC
T ss_pred ccceeeeecc
Confidence 9999999976
|
| >d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Polyketide synthase PKS18 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.51 E-value=4.6e-14 Score=131.74 Aligned_cols=180 Identities=14% Similarity=0.111 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|+++++.+ + . ....+..|+..||
T Consensus 92 ~~~la~~Aa~~aL~~ag~~~~dId-----~lI~~t~t~-~---------------------~-----~P~~a~~v~~~LG 139 (372)
T d1teda_ 92 AVPLAVDVSKRALAGLPYRAAEIG-----LLVLATSTG-F---------------------I-----APGVDVAIVKELG 139 (372)
T ss_dssp HHHHHHHHHHHHHTTCCCCGGGEE-----EEEEEESSC-C---------------------C-----SSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC-----EEEEeccCC-C---------------------C-----CchHHHHHHhhhc
Confidence 457999999999999999887776 666666321 1 1 1235678999999
Q ss_pred CCCCc--cccc-cchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCC
Q 018076 209 FQGPN--HAAV-TACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRD 285 (361)
Q Consensus 209 l~G~~--~~v~-~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~ 285 (361)
++... +.+. .||++++.||..|..+|++|..+.+||+++|.+. .. +.. .+. ++....
T Consensus 140 l~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s-~~----------~~~-----~d~----~~~~~~ 199 (372)
T d1teda_ 140 LSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCS-VN----------AVF-----ADD----INDVVI 199 (372)
T ss_dssp CCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECG-GG----------CCC-----CSS----HHHHHH
T ss_pred cCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhc-cc----------ccC-----CCc----chhhhh
Confidence 97643 3343 5899999999999999999999999999998521 00 000 000 000112
Q ss_pred cccccceeeeEeeCChhhHHhcCCeeeEEEEEEEeec-CC-CC----------CC-CCCCC-----cHHHHHHHHHHHHH
Q 018076 286 GFVIGEGSGVLVLEELEHAKKRGAKIYAEVRGYGMSG-DA-HH----------IT-QPHID-----GKGAILAMTRALKQ 347 (361)
Q Consensus 286 G~v~gEGAaalvL~~~~~A~~~g~~~~a~i~g~~~~~-d~-~~----------~~-~p~~~-----g~~~~~a~~~Al~~ 347 (361)
.+++||||+|+||++.+..... ......+.+..... .. .. +. ..... .+.+.++++++|++
T Consensus 200 ~~lfGDGAaA~ll~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~ 278 (372)
T d1teda_ 200 HSLFGDGCAALVIGASQVQEKL-EPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEMLWD 278 (372)
T ss_dssp HHHBCEEEEEEEEEEECTTSCC-CTTCEEEEEEEEEECTTCTTSEEEEEETTEEEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccceeEEeccCCccccc-CCceeEEecccccccCCCccccccCCCCCcceeechHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999999875543211 11222333332211 10 00 00 00111 35567889999999
Q ss_pred cCCCCCCcceeecC
Q 018076 348 VVHNVDGFEQLSIQ 361 (361)
Q Consensus 348 Agl~~~dId~ie~~ 361 (361)
+|++++|||++=+|
T Consensus 279 ~gl~~~did~~i~H 292 (372)
T d1teda_ 279 NGLQISDIDLWAIH 292 (372)
T ss_dssp TTCCGGGCSCEEEC
T ss_pred cCCCHHHhhhhhcc
Confidence 99999999998554
|
| >d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Thermus thermophilus [TaxId: 274]
Probab=99.39 E-value=9.7e-14 Score=115.11 Aligned_cols=119 Identities=14% Similarity=0.237 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++..+. ......+..|+..||
T Consensus 49 ~~~ma~~Aa~~aL~~agi~~~dId-----lli~~s~t~~--------------------------~~~p~~a~~v~~~Lg 97 (172)
T d1ub7a1 49 TSDLAFKAVEDLLRRHPGALEGVD-----AVIVATNTPD--------------------------ALFPDTAALVQARFG 97 (172)
T ss_dssp HHHHHHHHHHHHHHHSTTTTTTEE-----EEEEECSSCS--------------------------EEESCHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHhhcCcccccce-----EEEEeccccc--------------------------ccccchHHHHHHHhc
Confidence 467999999999999999987776 6777664321 122344567888899
Q ss_pred CCCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCccc
Q 018076 209 FQGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGFV 288 (361)
Q Consensus 209 l~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~v 288 (361)
.+..++.|..+|++++.+|..|..+|++|.++.+||+++|.. +.. .. |+.....++
T Consensus 98 ~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~-S~~----------------------~~-~~d~~~~~l 153 (172)
T d1ub7a1 98 LKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL-SKI----------------------ID-WNDRATAVL 153 (172)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG-GGT----------------------SC-TTCHHHHTT
T ss_pred cCccceeehhccccHHHHHHHHhhhhhcCCcceeEEeccccc-ccc----------------------cC-CCCcCeEEE
Confidence 988999999999999999999999999999999999999861 111 01 122234667
Q ss_pred ccceeeeEeeCChh
Q 018076 289 IGEGSGVLVLEELE 302 (361)
Q Consensus 289 ~gEGAaalvL~~~~ 302 (361)
+||||+++||++.+
T Consensus 154 fGDgAaA~ll~~~~ 167 (172)
T d1ub7a1 154 FGDGGGAAVVGKVR 167 (172)
T ss_dssp BCCEEEEEEEECCC
T ss_pred ecceeEEEEEEEcC
Confidence 89999999998765
|
| >d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Escherichia coli [TaxId: 562]
Probab=99.37 E-value=6.8e-14 Score=116.34 Aligned_cols=119 Identities=18% Similarity=0.223 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|++++..+. ......+..|...||
T Consensus 51 ~~~la~~Aa~~al~~a~~~~~~Id-----~li~~s~~~~--------------------------~~~P~~a~~v~~~Lg 99 (174)
T d1hnja1 51 VSTMGFEAATRAIEMAGIEKDQIG-----LIVVATTSAT--------------------------HAFPSAACQIQSMLG 99 (174)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCS--------------------------CSSSCHHHHHHHHHT
T ss_pred chHHHHHHHHHhhhhccccccccc-----EEEEecCCcc--------------------------ccccchhhhhhhccC
Confidence 457999999999999999998887 8888875432 112345667889999
Q ss_pred CCC-CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQG-PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~G-~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
++. +++.|..+|+++++||..|..+|++|.++.+||+++|. .+.. +. ++.....+
T Consensus 100 l~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~-~S~~----------~~-------------~~d~~~~~ 155 (174)
T d1hnja1 100 IKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDV-LART----------CD-------------PTDRGTII 155 (174)
T ss_dssp CCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-HHHH----------SC-------------TTCHHHHT
T ss_pred CCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeeh-hhcc----------cC-------------CCCCCeEE
Confidence 975 78999999999999999999999999999999999986 1111 00 11122346
Q ss_pred cccceeeeEeeCChh
Q 018076 288 VIGEGSGVLVLEELE 302 (361)
Q Consensus 288 v~gEGAaalvL~~~~ 302 (361)
++||||+++||++.+
T Consensus 156 lfGDgA~A~vl~~~~ 170 (174)
T d1hnja1 156 IFGDGAGAAVLAASE 170 (174)
T ss_dssp TBCCEEEEEEEEEES
T ss_pred EeceeeEEEEEEeCC
Confidence 789999999999754
|
| >d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway species: Streptomyces sp. r1128 [TaxId: 140437]
Probab=99.34 E-value=3.4e-13 Score=112.74 Aligned_cols=119 Identities=19% Similarity=0.226 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+.+|+++||+++|+++++++ .+++++..+.. .....+..++..++
T Consensus 58 ~~~ma~~Aa~~aL~~a~~~~~dId-----~li~~s~~~~~--------------------------~~p~~a~~v~~~l~ 106 (181)
T d1mzja1 58 IQVMGVAASRRALEHAGVDPAEID-----LVVVSTMTNFV--------------------------HTPPLSVAIAHELG 106 (181)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCCC--------------------------CSSCHHHHHHHHHT
T ss_pred HHHHhHHHHHhhhhhccCChhHCe-----EEEEeccCCcc--------------------------ccccHHHHHHHhhc
Confidence 467999999999999999988887 78888744321 11233556788888
Q ss_pred CC-CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCcc
Q 018076 209 FQ-GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDGF 287 (361)
Q Consensus 209 l~-G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G~ 287 (361)
.+ ..++.+..+|++++.||..|..+|++|..+.+||+++|. .+.. .. ++.....+
T Consensus 107 ~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~-~s~~----------------------~~-~~d~~~~~ 162 (181)
T d1mzja1 107 ADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATER-MTDV----------------------ID-LADRSLSF 162 (181)
T ss_dssp CTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEE-GGGG----------------------SC-SSCTTTTT
T ss_pred CCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeecc-cccc----------------------CC-CCCcceEE
Confidence 85 478999999999999999999999999999999999985 1211 01 22234567
Q ss_pred cccceeeeEeeCChh
Q 018076 288 VIGEGSGVLVLEELE 302 (361)
Q Consensus 288 v~gEGAaalvL~~~~ 302 (361)
++||||+|+||++.+
T Consensus 163 lfGDGAaA~ll~~~~ 177 (181)
T d1mzja1 163 LFGDGAGAAVVGPSD 177 (181)
T ss_dssp TBCEEEEEEEEEEES
T ss_pred EeeeeeEEEEEEeCC
Confidence 899999999998653
|
| >d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=99.14 E-value=1.9e-11 Score=108.00 Aligned_cols=89 Identities=19% Similarity=0.225 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+..++..+|+++|+++++++ .|++|+.... .-...++..++...|+
T Consensus 28 ~dL~~~~~~~~l~~~~i~~~~Id-----~vi~G~~~~~--------------------------~~~~n~ar~~al~agl 76 (268)
T d1m3ka1 28 HELGATVISAVLERAGVAAGEVN-----EVILGQVLPA--------------------------GEGQNPARQAAMKAGV 76 (268)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCT--------------------------TSCSCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCc-----EEEEeecccc--------------------------CcchHHHhHHHHHhCC
Confidence 57889999999999999999988 9999984311 0112344456666666
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCC
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES 249 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~ 249 (361)
. -|+++|+..|+||+.||.+|++.|++|.+|++|+||+|.
T Consensus 77 p~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~Es 118 (268)
T d1m3ka1 77 PQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMES 118 (268)
T ss_dssp CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEE
T ss_pred cccccceeecccCcccchHHHHHHHHHhCCCceEEeeccccc
Confidence 4 478999999999999999999999999999999999997
|
| >d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=99.12 E-value=1.2e-10 Score=103.23 Aligned_cols=90 Identities=18% Similarity=0.149 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcCC
Q 018076 130 IAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYGF 209 (361)
Q Consensus 130 ~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl 209 (361)
..|+..+++++|+++|+++++++ .|++|+....- .....++..++..-|+
T Consensus 25 ~dL~~~a~~~al~~~~i~~~~Id-----~vi~G~v~~~g-------------------------~~~~n~aR~~al~aGl 74 (273)
T d1ulqa1 25 DDLLAHALSVLVDRSGVPKEEVE-----DVYAGCANQAG-------------------------EDNRNVARMALLLAGF 74 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGCC-----EEEEECSCCSS-------------------------TTTTTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC-----EEEEEeccccc-------------------------cccccHHHHHHHHcCC
Confidence 56888999999999999999888 99999743210 0112345556666676
Q ss_pred C--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCC
Q 018076 210 Q--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES 249 (361)
Q Consensus 210 ~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~ 249 (361)
- -|+++|+..|+||+.||.+|++.|++|..|++|+||+|.
T Consensus 75 p~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~Es 116 (273)
T d1ulqa1 75 PVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVES 116 (273)
T ss_dssp CTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred CCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccc
Confidence 3 388999999999999999999999999999999999986
|
| >d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Putative polyketide synthase SCO1206 species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.06 E-value=1.6e-10 Score=97.74 Aligned_cols=117 Identities=19% Similarity=0.220 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .++++++.+ +. +++ .+..+...++
T Consensus 75 a~~la~~Aa~~aL~~ag~~~~dId-----~lI~~s~t~----------------------~~----~P~-~aa~v~~~lg 122 (200)
T d1u0ma1 75 AKSRVPAVIQRALDDAELLATDID-----VIIYVSCTG----------------------FM----MPS-LTAWLINEMG 122 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCS-----EEEEECSSS----------------------CC----SSC-HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCChhhhh-----eEEEeccCC----------------------CC----cch-hHHHHHHHHh
Confidence 457999999999999999998887 788776432 11 223 4557888899
Q ss_pred CCCC--cccc-ccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC-
Q 018076 209 FQGP--NHAA-VTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR- 284 (361)
Q Consensus 209 l~G~--~~~v-~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~- 284 (361)
+... .+.+ ..+|++++.+|..|..+|++|..+.+||+++|.. +. ..+|-|.+.
T Consensus 123 ~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~~-S~----------------------~~~~~d~~~~ 179 (200)
T d1u0ma1 123 FDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC-SL----------------------CYQPTDLGVG 179 (200)
T ss_dssp CCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG-GG----------------------GCCTTCCSHH
T ss_pred cCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEecc-cc----------------------ccCCCCCChh
Confidence 8763 4455 5799999999999999999999999999999851 11 111112111
Q ss_pred ---CcccccceeeeEeeCC
Q 018076 285 ---DGFVIGEGSGVLVLEE 300 (361)
Q Consensus 285 ---~G~v~gEGAaalvL~~ 300 (361)
...++||||+|+||..
T Consensus 180 ~~~~~~lFgDGAaA~ll~~ 198 (200)
T d1u0ma1 180 SLLCNGLFGDGIAAAVVRG 198 (200)
T ss_dssp HHHHHHHBCEEEEEEEEET
T ss_pred hhhcccccccccEEEEEec
Confidence 1346899999999975
|
| >d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=99.01 E-value=3.7e-10 Score=99.22 Aligned_cols=90 Identities=19% Similarity=0.198 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHH-CCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 130 IAYALCAADEALHD-AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 130 ~~l~l~a~~~Al~d-Ag~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
..|+..++.++|+. +|+++++++ .|++|+..... . ....++..++..-|
T Consensus 31 ~dL~~~~i~~~l~r~agi~~~~Id-----~vi~G~v~~~~----------------------~---~g~n~aR~~al~ag 80 (262)
T d1wdkc1 31 EDMSAHLISKVLERNSKVDPGEVE-----DVIWGCVNQTL----------------------E---QGWNIARMASLMTQ 80 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCGGGEE-----EEEEECSSBSB----------------------T---TTTTHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHhcCCCCHHHee-----EEEEEeecccc----------------------c---ccccchhhhHhhhh
Confidence 46888899999985 899988887 89999743210 0 01123444444444
Q ss_pred CC--CCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCC
Q 018076 209 FQ--GPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES 249 (361)
Q Consensus 209 l~--G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~ 249 (361)
+. =|+++|+..|+||+.||.+|++.|++|..|++|+||+|.
T Consensus 81 ~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEs 123 (262)
T d1wdkc1 81 IPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEH 123 (262)
T ss_dssp SCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred cccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccc
Confidence 43 388999999999999999999999999999999999995
|
| >d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Chalcone synthase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=98.95 E-value=2.5e-09 Score=92.40 Aligned_cols=119 Identities=12% Similarity=0.047 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|+..|+++||+++|+++++++ .|+++++.+.. ++...+ .+...++
T Consensus 102 ~~~la~~Aa~~aL~~a~~~~~dId-----~lI~~t~t~~~--------------------------~p~~~a-~~~~~l~ 149 (235)
T d1bi5a1 102 VPRLGKEAAVKAIKEWGQPKSKIT-----HLIVCTTSGVD--------------------------MPGADY-QLTKLLG 149 (235)
T ss_dssp HHHHHHHHHHHHHHHHCSCGGGCC-----EEEEEESSCCC--------------------------SSCHHH-HHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCChhHCc-----EEEEecccCCc--------------------------cCccHH-HHHHHHh
Confidence 446999999999999999998887 88888754321 122222 3455555
Q ss_pred CCCCc--c-ccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCC-
Q 018076 209 FQGPN--H-AAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGR- 284 (361)
Q Consensus 209 l~G~~--~-~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~- 284 (361)
+.... + .+..+|++++.+|..|..+|++|..+.|||+++|. .+.. .++-|...
T Consensus 150 ~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~-~S~~----------------------~~~~d~~~~ 206 (235)
T d1bi5a1 150 LRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEV-TAVT----------------------FRGPSDTHL 206 (235)
T ss_dssp CCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEEC-GGGT----------------------CCCCCTTCH
T ss_pred cCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeee-ccee----------------------cCCCCCCch
Confidence 54432 3 35679999999999999999999999999999996 1111 01101111
Q ss_pred ----CcccccceeeeEeeCChh
Q 018076 285 ----DGFVIGEGSGVLVLEELE 302 (361)
Q Consensus 285 ----~G~v~gEGAaalvL~~~~ 302 (361)
..+++||||+|+||+..+
T Consensus 207 ~~~v~~~lFGDGA~A~vl~~~p 228 (235)
T d1bi5a1 207 DSLVGQALFGDGAAALIVGSDP 228 (235)
T ss_dssp HHHHHHHHBCCEEEEEEEESSC
T ss_pred hhhcceeeeccceEEEEEecCC
Confidence 134689999999998653
|
| >d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS species: Staphylococcus aureus [TaxId: 1280]
Probab=98.90 E-value=1.3e-10 Score=95.37 Aligned_cols=113 Identities=14% Similarity=0.155 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHHHcC
Q 018076 129 FIAYALCAADEALHDAKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSMKYG 208 (361)
Q Consensus 129 ~~~l~l~a~~~Al~dAg~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg 208 (361)
...|++.|++++|++.+ +++++ -+++++..+. ......+..+...++
T Consensus 50 ~~~ma~~Aa~~al~~~~--~~~id-----~li~~t~~~~--------------------------~~~p~~a~~v~~~lg 96 (166)
T d1xpma1 50 IVSMGANAAKDIITDED--KKKIG-----MVIVATESAV--------------------------DAAKAAAVQIHNLLG 96 (166)
T ss_dssp HHHHHHHHHHTTCCHHH--HHHEE-----EEEEECSSCS--------------------------BSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhcccc--CCCCC-----eEEEeccccc--------------------------cccchhHHHHHHhhc
Confidence 35688889998886653 22332 3455553221 122345667888889
Q ss_pred CCC--CccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCCCCChHHHHHHhhcccccccCCCCCCCCCcCCCCCCCc
Q 018076 209 FQG--PNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTESSIDALSMAGFCKSRALTTKYNGTPQEASRPFDCGRDG 286 (361)
Q Consensus 209 l~G--~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~pfd~~~~G 286 (361)
+.. .++.+..+|+++++||..|..+|++|..+.+||++.|.. .. . ++ ..+-
T Consensus 97 ~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~-~~----------------------~---~~-~~~~ 149 (166)
T d1xpma1 97 IQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTA-RY----------------------G---LN-SGGE 149 (166)
T ss_dssp CCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEE-CC----------------------C---TT-CSSG
T ss_pred cccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceE-ec----------------------c---CC-CCCC
Confidence 865 568899999999999999999999999999999998841 10 0 01 1223
Q ss_pred ccccceeeeEeeCCh
Q 018076 287 FVIGEGSGVLVLEEL 301 (361)
Q Consensus 287 ~v~gEGAaalvL~~~ 301 (361)
+++||||+|+||++.
T Consensus 150 ~~fGDGA~A~ll~~~ 164 (166)
T d1xpma1 150 PTQGAGAVAMVIAHN 164 (166)
T ss_dssp GGCEEEEEEEEEEES
T ss_pred ccCCCeeEEEEEecC
Confidence 678999999999864
|
| >d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.58 E-value=8.5e-08 Score=84.07 Aligned_cols=89 Identities=19% Similarity=0.160 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHH----CCCCCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHHHhccCCCCCcchhhhhhhHHHHHHHH
Q 018076 130 IAYALCAADEALHD----AKWLPSDQGQKERTGVSIGGGIGSISDTVDAAQMICEKRLRRLSPFFIPRILINMASGHVSM 205 (361)
Q Consensus 130 ~~l~l~a~~~Al~d----Ag~~~~~~~~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 205 (361)
..|+..++.++|+. +++++++++ .|++|+.... + ....++..++.
T Consensus 36 ~~L~~~~i~~~l~r~~~~~~idp~~Id-----~vi~G~v~~~-------------------------g-~~~~~aR~~al 84 (269)
T d1afwa1 36 DYLLYNFLNEFIGRFPEPLRADLNLIE-----EVACGNVLNV-------------------------G-AGATEHRAACL 84 (269)
T ss_dssp HHHHHHHHHHHHHTSCHHHHTCGGGCC-----CEEEECSSSB-------------------------G-GGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCChhhcC-----EEEecccccc-------------------------c-cccccchhhhh
Confidence 45777788888875 468888887 8999974210 1 12234556666
Q ss_pred HcCC--CCCccccccchhhHHHHHHHHHHHHHcCCCCEEEEeecCC
Q 018076 206 KYGF--QGPNHAAVTACATGAHSIGDAARMIQFGDSDVMVAGGTES 249 (361)
Q Consensus 206 ~lgl--~G~~~~v~~acasgl~Al~~A~~~I~~G~~d~~lvgg~d~ 249 (361)
.-|+ .-|+++|+..|+||+.||..|++.|++|..|++|+||+|.
T Consensus 85 ~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~Es 130 (269)
T d1afwa1 85 ASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVES 130 (269)
T ss_dssp HTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEE
T ss_pred hccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccc
Confidence 6666 4599999999999999999999999999999999999996
|
| >d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Thiolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.74 E-value=1.2e-05 Score=60.93 Aligned_cols=49 Identities=18% Similarity=0.318 Sum_probs=41.4
Q ss_pred CCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 308 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 308 g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
|.+|+|+|.+++...- .|...+.+...|++++|+++|++++|||+||+|
T Consensus 2 gl~plAri~~~a~~g~-----~P~~m~~gPv~Ai~klL~r~gl~~~Did~~Ein 50 (124)
T d1afwa2 2 NLPVLGRYIDFQTVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFEIN 50 (124)
T ss_dssp TCCCCEEEEEEEEEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred CCcEEEEEEEEEEEec-----CHHHhhhChHHHHHHHHHHcCCCcccCcEEEec
Confidence 5688999999988753 244446677999999999999999999999997
|
| >d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) species: Pseudomonas fragi [TaxId: 296]
Probab=97.60 E-value=1.9e-05 Score=60.05 Aligned_cols=49 Identities=27% Similarity=0.434 Sum_probs=40.1
Q ss_pred CCeeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 308 GAKIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 308 g~~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
|.+|+++|++++.... .|...+.+...+++++|+++|++++|||+||+|
T Consensus 1 Gl~pla~i~~~~~~g~-----dP~~mg~~p~~A~~klL~ragl~~~did~~Ein 49 (128)
T d1wdkc2 1 GLEPLAVIRSMAVAGV-----DPAIMGYGPVPATQKALKRAGLNMADIDFIELN 49 (128)
T ss_dssp TCCCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred CCCEEEEEEEEEEEec-----CHHHhccCcHHHHHHHhhhcCccccccceEEee
Confidence 4678999999988753 233335566899999999999999999999997
|
| >d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Beta-ketoadipyl CoA thiolase species: Thermus thermophilus [TaxId: 274]
Probab=97.50 E-value=3.3e-05 Score=58.43 Aligned_cols=47 Identities=23% Similarity=0.391 Sum_probs=38.1
Q ss_pred eeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 310 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 310 ~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+|+|+|++++.... .|...+.+...+++++|+++|++++|||+||+|
T Consensus 1 KPlA~i~~~~~~g~-----~P~~~~~~P~~A~~~~L~r~gl~~~Did~~Ein 47 (125)
T d1ulqa2 1 RPLARVRAIAVAGV-----PPRIMGIGPVPATRKALERAGLSFSDLGLIELN 47 (125)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEEC
T ss_pred CCeEEEEEEEEEec-----CHHHHhhccHHHHHhHhhccCcCccccchheec
Confidence 46889999987653 233335566899999999999999999999997
|
| >d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Thiolase-related domain: Biosynthetic thiolase species: Zoogloea ramigera [TaxId: 350]
Probab=97.46 E-value=3.5e-05 Score=58.20 Aligned_cols=47 Identities=17% Similarity=0.357 Sum_probs=38.8
Q ss_pred eeeEEEEEEEeecCCCCCCCCCCCcHHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 310 KIYAEVRGYGMSGDAHHITQPHIDGKGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 310 ~~~a~i~g~~~~~d~~~~~~p~~~g~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
+|+++|+++..... .|...+.+...+++++|+++|++.+|||+||+|
T Consensus 2 ~Plari~~~a~~g~-----dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~Ein 48 (124)
T d1m3ka2 2 QPLGRIVSWATVGV-----DPKVMGTGPIPASRKALERAGWKIGDLDLVEAN 48 (124)
T ss_dssp CCSEEEEEEEEEEC-----CGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred CcEEEEEEEEEEec-----ChHHhccchHHHHHHHHHHcCCChhcccHHHhc
Confidence 57899999987653 244445666999999999999999999999997
|
| >d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Thiolase-like superfamily: Thiolase-like family: Chalcone synthase-like domain: Ketoacyl-ACP synthase III (FabH) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=81.79 E-value=0.37 Score=36.63 Aligned_cols=27 Identities=11% Similarity=-0.098 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcceeecC
Q 018076 335 KGAILAMTRALKQVVHNVDGFEQLSIQ 361 (361)
Q Consensus 335 ~~~~~a~~~Al~~Agl~~~dId~ie~~ 361 (361)
..+.++++++|+++|++++|||++-+|
T Consensus 48 ~~v~~~i~~~L~~~gl~~~dId~~i~H 74 (148)
T d1u6ea2 48 FKMGDVGRRAMDAAGVRPDQIDVFVPH 74 (148)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEEEC
T ss_pred HHHHHHHHHHHHHcCCCcccccEEEec
Confidence 344678999999999999999998765
|