BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 018081
         (361 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|C3XRY1|NO66_BRAFL Bifunctional lysine-specific demethylase and histidyl-hydroxylase
           NO66 OS=Branchiostoma floridae GN=BRAFLDRAFT_123918 PE=3
           SV=1
          Length = 607

 Score = 32.7 bits (73), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 20/124 (16%)

Query: 215 PVIIKKYLLEEISPTWLNVSLRMKDDHETDKQFGWVLEMYAYAVASALHGVRHILRKDFM 274
           P+++K++L E  +  W +     K  HE D QFG  L++  Y       G R        
Sbjct: 215 PLLVKRHL-ESYNDGWFSTEDLTKILHENDIQFGRNLDVTTYE-----GGQRETHNPPGR 268

Query: 275 LQPP--WDPEVGKRFILHYTYGCDYNLKGELTYGKIGEWRFDK--RSFLNGPPPKNLSLP 330
             P   WD         +Y  GC   L    TY + G WR     + + +     N+ L 
Sbjct: 269 ANPAVVWD---------YYQNGCSVRLLNPQTYSQ-GVWRLCSTLQEYFSSMVGANIYLT 318

Query: 331 PPGV 334
           PPG 
Sbjct: 319 PPGT 322


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.140    0.442 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,179,838
Number of Sequences: 539616
Number of extensions: 6841902
Number of successful extensions: 15088
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15088
Number of HSP's gapped (non-prelim): 2
length of query: 361
length of database: 191,569,459
effective HSP length: 119
effective length of query: 242
effective length of database: 127,355,155
effective search space: 30819947510
effective search space used: 30819947510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)