Query 018082
Match_columns 361
No_of_seqs 212 out of 1635
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 09:39:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018082.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018082hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 9.6E-45 3.3E-49 352.0 23.7 262 71-354 17-317 (413)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.2E-43 4.2E-48 339.9 22.6 220 70-335 52-283 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 3.8E-44 1.3E-48 344.4 15.7 217 70-335 57-293 (383)
4 1b5f_A Protein (cardosin A); h 100.0 6.7E-44 2.3E-48 321.9 15.7 216 70-333 9-238 (239)
5 2apr_A Rhizopuspepsin; hydrola 100.0 8.1E-43 2.8E-47 328.9 21.6 220 71-338 12-245 (325)
6 1tzs_A Cathepsin E; hydrolase, 100.0 9.3E-42 3.2E-46 325.0 22.2 223 61-335 14-252 (351)
7 3aup_A SBG7S, BG, basic 7S glo 100.0 1.9E-41 6.4E-46 328.6 23.7 261 71-354 18-309 (403)
8 3cms_A Chymosin B; hydrolase, 100.0 2.8E-42 9.5E-47 325.0 16.4 216 70-334 10-239 (323)
9 4aa9_A Chymosin; hydrolase, as 100.0 4E-42 1.4E-46 323.5 17.0 218 70-335 7-237 (320)
10 1mpp_A Pepsin; hydrolase(acid 100.0 1.3E-41 4.4E-46 325.2 20.4 220 70-336 14-262 (361)
11 1qdm_A Prophytepsin; aspartic 100.0 1.9E-41 6.4E-46 334.2 20.5 218 70-334 48-282 (478)
12 1am5_A Pepsin, acid proteinase 100.0 9.6E-42 3.3E-46 321.4 17.7 216 70-334 8-237 (324)
13 1dpj_A Proteinase A; proteinas 100.0 1.4E-41 4.9E-46 320.9 18.3 215 70-334 9-241 (329)
14 1htr_B Gastricsin; aspartyl pr 100.0 2.8E-41 9.5E-46 319.0 20.1 218 71-335 9-241 (329)
15 1j71_A Candidapepsin, aspartic 100.0 2.3E-41 7.8E-46 320.2 19.4 215 72-335 10-242 (334)
16 3c9x_A Trichoderma reesei aspa 100.0 1.5E-41 5E-46 320.9 17.5 215 71-332 12-240 (329)
17 2qzx_A Candidapepsin-5; aspart 100.0 2.9E-41 1E-45 320.5 19.6 215 72-335 10-242 (342)
18 1oew_A Endothiapepsin; hydrola 100.0 2.2E-41 7.6E-46 319.6 17.7 213 72-332 13-239 (329)
19 3k1w_A Renin; protease, altern 100.0 1.6E-41 5.4E-46 322.2 16.4 220 70-335 14-250 (341)
20 1miq_A Plasmepsin; aspartic pr 100.0 3.6E-41 1.2E-45 323.4 16.5 212 70-336 58-287 (375)
21 3pvk_A Candidapepsin-2; hydrol 100.0 1.3E-40 4.5E-45 315.9 20.1 216 72-335 10-242 (342)
22 3fv3_A SAPP1P-secreted asparti 100.0 2.2E-40 7.4E-45 314.1 21.3 209 72-336 10-245 (339)
23 3qvc_A Histo-aspartic protease 100.0 1.1E-40 3.7E-45 326.1 18.7 212 70-336 133-362 (451)
24 3lpj_A Beta-secretase 1; alzhe 100.0 5.2E-40 1.8E-44 323.2 22.9 238 71-353 71-335 (455)
25 2ewy_A Beta-secretase 2; BACE2 100.0 9E-40 3.1E-44 314.9 21.1 222 71-336 10-251 (383)
26 1t6e_X Xylanase inhibitor; two 100.0 1.3E-39 4.6E-44 313.4 20.7 252 70-354 10-287 (381)
27 2qp8_A Beta-secretase 1; BACE1 100.0 4E-39 1.4E-43 311.6 22.8 220 72-336 19-262 (395)
28 3vf3_A Beta-secretase 1; struc 100.0 6.6E-39 2.3E-43 310.7 24.3 237 72-353 26-289 (402)
29 2bju_A Plasmepsin II; aspartic 100.0 1.3E-40 4.6E-45 325.1 12.4 212 70-334 134-361 (453)
30 1yg9_A Aspartic protease BLA G 100.0 7.2E-40 2.5E-44 309.4 16.9 215 70-335 13-243 (330)
31 1ibq_A Aspergillopepsin; aspar 100.0 2E-39 6.7E-44 305.8 19.1 210 72-332 12-235 (325)
32 1izd_A Aspartic proteinase; su 100.0 8.7E-39 3E-43 301.1 17.4 209 72-332 13-235 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 4.8E-38 1.6E-42 298.1 20.3 200 73-336 11-237 (340)
34 1bxo_A Protein (penicillopepsi 100.0 1.4E-38 4.7E-43 299.7 14.6 208 72-332 13-234 (323)
35 1lya_A Cathepsin D; lysosomal 99.9 4.8E-23 1.6E-27 158.6 6.0 84 70-183 9-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.9 3.8E-21 1.3E-25 173.1 14.1 132 194-335 5-150 (241)
37 2hs1_A HIV-1 protease; ultra-h 86.5 0.85 2.9E-05 34.0 4.4 29 76-106 9-37 (99)
38 1fmb_A EIAV protease; hydrolas 85.3 0.85 2.9E-05 34.4 4.0 27 76-104 9-35 (104)
39 2i1a_A DNA damage-inducible pr 85.0 0.76 2.6E-05 36.7 3.9 31 72-104 23-53 (148)
40 3ec0_A Protease; HIV-2, inhibi 83.5 1.4 4.9E-05 32.8 4.4 28 77-106 10-37 (99)
41 3s8i_A Protein DDI1 homolog 1; 80.4 1.3 4.3E-05 35.7 3.5 34 278-327 24-57 (148)
42 2i1a_A DNA damage-inducible pr 80.2 1.6 5.3E-05 34.9 4.0 29 286-327 31-59 (148)
43 3s8i_A Protein DDI1 homolog 1; 79.4 1.5 5.2E-05 35.2 3.6 31 73-105 22-52 (148)
44 2hah_A Protease, retropepsin; 75.1 2.7 9.2E-05 32.3 3.7 27 75-104 14-40 (116)
45 3liy_A Protease; hydrolase, hy 75.0 2.6 8.7E-05 32.1 3.5 31 77-107 12-45 (116)
46 3sqf_A Protease; folded monome 70.6 4.3 0.00015 31.0 3.8 30 76-107 10-39 (114)
47 3slz_A GAG-Pro-POL polyprotein 68.0 6.3 0.00021 30.9 4.4 33 72-106 19-51 (132)
48 1lya_A Cathepsin D; lysosomal 60.0 7.2 0.00024 28.6 3.3 15 308-322 30-44 (97)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 57.2 9.1 0.00031 32.3 3.8 27 76-104 9-35 (203)
50 2rsp_A RSV protease; hydrolase 56.9 11 0.00036 29.3 3.8 23 82-106 27-49 (124)
51 1fmb_A EIAV protease; hydrolas 46.3 12 0.0004 28.0 2.5 34 279-325 6-39 (104)
52 3fv3_A SAPP1P-secreted asparti 44.4 15 0.00051 33.2 3.5 37 270-322 5-43 (339)
53 2hs1_A HIV-1 protease; ultra-h 44.2 13 0.00043 27.6 2.3 30 279-321 6-35 (99)
54 1j71_A Candidapepsin, aspartic 43.8 15 0.00053 33.2 3.5 37 270-322 5-43 (334)
55 1wkr_A Polyporopepsin; hydrola 43.8 18 0.0006 32.8 3.9 37 270-322 5-43 (340)
56 2hah_A Protease, retropepsin; 43.4 15 0.00052 28.0 2.8 30 278-321 11-40 (116)
57 3ec0_A Protease; HIV-2, inhibi 42.9 14 0.00048 27.3 2.4 29 279-320 6-34 (99)
58 2qzx_A Candidapepsin-5; aspart 41.5 18 0.0006 32.9 3.5 37 270-322 5-43 (342)
59 1ibq_A Aspergillopepsin; aspar 40.3 29 0.00099 31.2 4.7 40 268-324 6-45 (325)
60 3slz_A GAG-Pro-POL polyprotein 39.8 25 0.00084 27.5 3.5 27 284-323 25-51 (132)
61 3pvk_A Candidapepsin-2; hydrol 37.7 22 0.00075 32.1 3.5 15 308-322 29-43 (342)
62 3ka2_A [L-Ala51;Gly51']HIV-1 p 35.9 41 0.0014 28.3 4.5 27 76-104 113-139 (203)
63 1bxo_A Protein (penicillopepsi 34.3 29 0.00099 31.1 3.6 40 267-323 6-45 (323)
64 3c9x_A Trichoderma reesei aspa 34.0 43 0.0015 30.1 4.8 33 275-323 13-47 (329)
65 1mpp_A Pepsin; hydrolase(acid 33.6 33 0.0011 31.2 4.0 41 266-322 6-49 (361)
66 1b5f_A Protein (cardosin A); h 33.5 37 0.0013 29.0 4.1 31 74-104 188-226 (239)
67 1izd_A Aspartic proteinase; su 32.9 31 0.0011 30.9 3.6 40 268-324 7-46 (323)
68 1oew_A Endothiapepsin; hydrola 32.4 47 0.0016 29.8 4.8 32 275-322 13-46 (329)
69 3cms_A Chymosin B; hydrolase, 31.9 40 0.0014 30.2 4.2 15 308-322 31-45 (323)
70 1yg9_A Aspartic protease BLA G 30.8 31 0.0011 31.0 3.3 30 277-322 17-46 (330)
71 1htr_B Gastricsin; aspartyl pr 29.8 41 0.0014 30.1 3.9 15 308-322 29-43 (329)
72 1lya_B Cathepsin D; lysosomal 25.9 59 0.002 27.5 4.0 32 74-105 99-137 (241)
73 2apr_A Rhizopuspepsin; hydrola 24.6 48 0.0016 29.7 3.3 32 275-322 13-46 (325)
74 3sqf_A Protease; folded monome 23.6 69 0.0023 24.2 3.4 26 283-321 11-36 (114)
75 1dpj_A Proteinase A; proteinas 21.9 57 0.002 29.1 3.3 15 308-322 30-44 (329)
76 3liy_A Protease; hydrolase, hy 21.1 49 0.0017 25.1 2.1 28 282-322 11-43 (116)
77 2qp8_A Beta-secretase 1; BACE1 20.2 63 0.0022 29.7 3.3 15 308-322 38-52 (395)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=9.6e-45 Score=352.02 Aligned_cols=262 Identities=23% Similarity=0.375 Sum_probs=210.8
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCC-
Q 018082 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL- 149 (361)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~- 149 (361)
..+++|+++|.||||+|+|.|+|||||+++||+|..| .+|+|++.++|.++.|........
T Consensus 17 ~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s~~C~~~~~~~~~ 78 (413)
T 3vla_A 17 ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRTSQCSLSGSIACG 78 (413)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTSHHHHHTTCCEEE
T ss_pred CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCcccccccccCCCc
Confidence 3578999999999999999999999999999998764 369999999999999987654322
Q ss_pred -------CCCCCCCCCcceeee-CCCCeEEEEEEEEEEEEecccCCcc-ccccCceeeeeeeeeccCCCCCCCCCCcceE
Q 018082 150 -------TDCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQ-TTSTNGSLIFGCGARQSGNLDSTNEEALDGI 220 (361)
Q Consensus 150 -------~~c~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~~~~~~~~~~-~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GI 220 (361)
..|. ++.|.|.+.| ++++.+.|++++|+|+|++.++... ....++++.|||++.+.... ....+|||
T Consensus 79 ~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g---~~~~~dGI 154 (413)
T 3vla_A 79 DCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN---LASGVVGM 154 (413)
T ss_dssp CCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT---SCTTCCEE
T ss_pred ccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC---cccccccc
Confidence 3454 3579999999 5877779999999999986543321 11346789999999863211 23468999
Q ss_pred eecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCcceEEecCcCC---------CC-ceEecCCCCC-------------
Q 018082 221 IGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ------------- 276 (361)
Q Consensus 221 lGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~-~~~G~l~~Gg~d~---------~~-~~~~p~~~~~------------- 276 (361)
||||++..|++.||.++++|+++||+||.+. ...|+|+||++|. ++ +.|+|++.++
T Consensus 155 lGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~ 234 (413)
T 3vla_A 155 AGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPS 234 (413)
T ss_dssp EECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCC
T ss_pred cccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCC
Confidence 9999999999999999999999999999984 4679999999873 35 9999998653
Q ss_pred CceEEEEeEEEEcCEEeecCCcccccC--CCccEEEcccccccccChHHHHHHHHHHHhhCC--CCc-cccccCcCceee
Q 018082 277 PHYSINMTAVQVGLDFLNLPTDVFGVG--DNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP--DLK-VHTVHDEYTCFQ 351 (361)
Q Consensus 277 ~~w~v~l~~i~v~g~~~~~~~~~~~~~--~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~--~~~-~~~~~~~~~C~~ 351 (361)
.+|+|+|++|+|+++.+.++.+.|... +.+++||||||++++||+++|++|.++|.+++. ... ......+..||+
T Consensus 235 ~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~ 314 (413)
T 3vla_A 235 VEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFS 314 (413)
T ss_dssp CSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEE
T ss_pred ceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceec
Confidence 689999999999999998877666533 357899999999999999999999999998753 221 122334568999
Q ss_pred ccC
Q 018082 352 YSE 354 (361)
Q Consensus 352 ~~~ 354 (361)
.++
T Consensus 315 ~~~ 317 (413)
T 3vla_A 315 TDN 317 (413)
T ss_dssp CTT
T ss_pred cCC
Confidence 864
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.2e-43 Score=339.92 Aligned_cols=220 Identities=26% Similarity=0.407 Sum_probs=187.2
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (361)
++.+.+|+++|+||||||+|+|+|||||+++||+|..|..|. |..++.|||++|+|++..
T Consensus 52 n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~-----C~~~~~y~~~~SsT~~~~--------------- 111 (370)
T 3psg_A 52 NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLA-----CSDHNQFNPDDSSTFEAT--------------- 111 (370)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGG-----GTTSCCBCGGGCTTCEEE---------------
T ss_pred eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcc-----cCCCCCCCCccCcCcEEC---------------
Confidence 678899999999999999999999999999999999987432 233479999999999983
Q ss_pred CCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC-
Q 018082 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (361)
Q Consensus 150 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~- 228 (361)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.||++....+.+. ....+|||||||++..
T Consensus 112 -------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~~--~~~~~dGIlGLg~~~~s 173 (370)
T 3psg_A 112 -------SQELSITYGTGS-MTGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFL--YYAPFDGILGLAYPSIS 173 (370)
T ss_dssp -------EEEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSCSEEEECSCGGGC
T ss_pred -------CcEEEEEeCCce-EEEEEEEEEEeeCCcc--------cCCeEEEEEEeeccccc--ccCCccceeccCCcccc
Confidence 478999999998 5999999999998854 55899999998765322 3457899999999764
Q ss_pred -----cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcCEEeecCC
Q 018082 229 -----SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (361)
Q Consensus 229 -----s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (361)
+++++|++||+| +++||+||.+. ..+|+|+|||+|+ +++.|+|+. ++.+|.|.+++|+|+++.+..
T Consensus 174 ~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v~g~~~~~-- 250 (370)
T 3psg_A 174 ASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITMDGETIAC-- 250 (370)
T ss_dssp GGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEESSSSEEEC--
T ss_pred ccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEECCEEEec--
Confidence 589999999999 69999999985 4589999999996 579999997 468999999999999987642
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 298 ~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
..++.+|+||||+++++|++++++|.+++++..
T Consensus 251 -----~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 283 (370)
T 3psg_A 251 -----SGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE 283 (370)
T ss_dssp -----TTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE
T ss_pred -----CCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc
Confidence 235679999999999999999999999998764
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.8e-44 Score=344.40 Aligned_cols=217 Identities=24% Similarity=0.408 Sum_probs=185.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~----~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~ 145 (361)
++.+.+|+++|+||||+|+|+|+|||||+++||+|..|. .|.. ++.|||++|+|++.
T Consensus 57 n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-------~~~y~~~~SsT~~~------------ 117 (383)
T 2x0b_A 57 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-------HKLFDASDSSSYKH------------ 117 (383)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-------SCCBCGGGCTTCEE------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-------CCCCCCCCCCcEEE------------
Confidence 567889999999999999999999999999999999885 4654 37999999999998
Q ss_pred CCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCC
Q 018082 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGK 225 (361)
Q Consensus 146 ~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~ 225 (361)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.||+++.+.+... ....+|||||||+
T Consensus 118 ----------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~f--~~~~~dGIlGLg~ 175 (383)
T 2x0b_A 118 ----------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------VT-QMFGEVTEMPALPF--MLAEFDGVVGMGF 175 (383)
T ss_dssp ----------EEEEEEEECSSCE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECCHHHH--TTCSSSEEEECSC
T ss_pred ----------CCcEEEEEcCCcc-EEEEEEeeEEEEcCce--------EE-EEEEEEEecCCccc--ccCCCceEeccCC
Confidence 3478999999998 5999999999998753 56 99999998755211 2356899999999
Q ss_pred CCC------cHHHHhhhcCCC-CCceEEeecCC-C----CcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEc
Q 018082 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-N----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVG 289 (361)
Q Consensus 226 ~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~----~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~ 289 (361)
+.. +++++|++||+| +++||+||.+. . .+|+|+|||+|+. ++.|+|+. ...+|.|.|++|+|+
T Consensus 176 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~v~l~~i~v~ 254 (383)
T 2x0b_A 176 IEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVG 254 (383)
T ss_dssp GGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCEEEECEEEES
T ss_pred CccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEEEEEeEEEeC
Confidence 764 489999999999 69999999985 2 2799999999964 58999997 568999999999999
Q ss_pred CEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 290 LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 290 g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
++.+. ...++.+|+||||+++++|++++++|.+++++..
T Consensus 255 ~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~ 293 (383)
T 2x0b_A 255 SSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK 293 (383)
T ss_dssp SCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred CceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc
Confidence 87642 1346789999999999999999999999998753
No 4
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=6.7e-44 Score=321.92 Aligned_cols=216 Identities=28% Similarity=0.418 Sum_probs=184.2
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~---~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~ 146 (361)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 69 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-------HSMYESSDSSTYKEN------------ 69 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-------SCCBCGGGCTTCEEE------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-------CCCCCCccCCCeeeC------------
Confidence 456789999999999999999999999999999999986 4654 378999999999873
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCC-CCCCCCCCcceEeecCC
Q 018082 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGK 225 (361)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~ 225 (361)
.|.+.+.|++|+ +.|.+++|+|+|++.. ++++.||++....+. | ....++||||||+
T Consensus 70 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~f---~~~~~~GilGLg~ 127 (239)
T 1b5f_A 70 ----------GTFGAIIYGTGS-ITGFFSQDSVTIGDLV--------VKEQDFIEATDEADNVF---LHRLFDGILGLSF 127 (239)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH---TTCSCCEEEECSC
T ss_pred ----------CcEEEEEECCCc-EEEEEEEEEEEECCcE--------EccEEEEEEEeccCccc---cccCcceEEecCc
Confidence 368999999998 5999999999998754 458999999876542 3 2346899999999
Q ss_pred CCCc--HHHHhhhcCCC-CCceEEeecCC---CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEeec
Q 018082 226 SNSS--MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (361)
Q Consensus 226 ~~~s--~~~~l~~~g~i-~~~Fs~~l~~~---~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~ 295 (361)
+..+ ++.+|++|++| +++||+||.+. ...|+|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+.+
T Consensus 128 ~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (239)
T 1b5f_A 128 QTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGF 206 (239)
T ss_dssp CSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCT
T ss_pred cccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEecc
Confidence 8865 78899999999 69999999874 35799999999974 57899997 467999999999999988754
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHh
Q 018082 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS 333 (361)
Q Consensus 296 ~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~ 333 (361)
.. ....+||||||+++++|++++++|+++|++
T Consensus 207 ~~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 207 CA------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TT------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cC------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 32 246799999999999999999999999875
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=8.1e-43 Score=328.90 Aligned_cols=220 Identities=25% Similarity=0.423 Sum_probs=187.9
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCC
Q 018082 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (361)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (361)
..+..|+++|.||||+|+++|+|||||+++||+|..|..| . ..++.|||++|+|++.
T Consensus 12 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~-----~~~~~y~~~~SsT~~~----------------- 68 (325)
T 2apr_A 12 GNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-G-----SGQTKYDPNQSSTYQA----------------- 68 (325)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-C-----TTSCCBCGGGCTTCEE-----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-h-----cCCCCCCcccCCCeee-----------------
Confidence 4677999999999999999999999999999999999988 2 2347999999999987
Q ss_pred CCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC--
Q 018082 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (361)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (361)
..|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++..++.|. ....+||||||++..
T Consensus 69 -----~~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f~---~~~~~GilGLg~~~~s~ 132 (325)
T 2apr_A 69 -----DGRTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASFA---SGPNDGLLGLGFDTITT 132 (325)
T ss_dssp -----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH---TSSCSEEEECSCGGGCS
T ss_pred -----CCCEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCcccc---cCCCceEEEeCCccccc
Confidence 347899999999978999999999998754 45899999998765442 234899999998753
Q ss_pred -----cHHHHhhhcCCC-CCceEEeecCC--CCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcCEEeecC
Q 018082 229 -----SMISQLASSGGV-RKMFAHCLDGI--NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (361)
Q Consensus 229 -----s~~~~l~~~g~i-~~~Fs~~l~~~--~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~ 296 (361)
+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+.+++.+|.|.+++|+|+++ +.
T Consensus 133 ~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~-- 209 (325)
T 2apr_A 133 VRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV-- 209 (325)
T ss_dssp STTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE--
T ss_pred ccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec--
Confidence 589999999999 69999999653 5679999999985 568999997667899999999999983 31
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCCCC
Q 018082 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDL 338 (361)
Q Consensus 297 ~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~~~ 338 (361)
.....+||||||++++||++++++|++++.++++..
T Consensus 210 ------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~ 245 (325)
T 2apr_A 210 ------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD 245 (325)
T ss_dssp ------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS
T ss_pred ------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC
Confidence 124579999999999999999999999998876643
No 6
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.3e-42 Score=324.98 Aligned_cols=223 Identities=25% Similarity=0.385 Sum_probs=189.2
Q ss_pred CCCCCCCCCCCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcCCccCCCCCCcceeecCCC
Q 018082 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (361)
Q Consensus 61 ~~p~~~~~~~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~ 138 (361)
..|+. ++.+.+|+++|.||||+|+++|+|||||+++||+|..|. .|.. ++.|||++|+|++.
T Consensus 14 ~~~l~----n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~----- 77 (351)
T 1tzs_A 14 KEPLI----NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-------HSRFQPSQSSTYSQ----- 77 (351)
T ss_dssp CCTTG----GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCBC-----
T ss_pred ceece----ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-------CCcCCcccCcceEE-----
Confidence 35555 567789999999999999999999999999999999987 5654 37999999999987
Q ss_pred cccCCCCCCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcc
Q 018082 139 EFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALD 218 (361)
Q Consensus 139 ~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~ 218 (361)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++++.||++....+... ....++
T Consensus 78 -----------------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~--~~~~~~ 129 (351)
T 1tzs_A 78 -----------------PGQSFSIQYGTGS-LSGIIGADQVSVEGLT--------VVGQQFGESVTEPGQTF--VDAEFD 129 (351)
T ss_dssp -----------------CSCEEEEESSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSCS
T ss_pred -----------------CCCEEEEEeCCCC-eEEEEEEeEEEECCeE--------ECCeEEEEEEecccccc--ccCCCc
Confidence 4589999999998 5999999999998754 45899999988655321 235689
Q ss_pred eEeecCCCCC------cHHHHhhhcCCC-CCceEEeecCCC---CcceEEecCcCC----CCceEecCCCCCCceEEEEe
Q 018082 219 GIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN---GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (361)
Q Consensus 219 GIlGLg~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~~---~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~ 284 (361)
||||||++.. +++++|++||+| +++||+||.+.. ..|.|+|||+|+ +++.|+|+. ...+|.|.++
T Consensus 130 GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~ 208 (351)
T 1tzs_A 130 GILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIALD 208 (351)
T ss_dssp EEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEEE
T ss_pred eEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEeC
Confidence 9999999764 489999999999 699999999852 279999999995 568999997 4689999999
Q ss_pred EEEEcCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 285 ~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
+|+|+++.+.. .....+||||||+++++|++++++|.+++++..
T Consensus 209 ~i~v~~~~~~~-------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~ 252 (351)
T 1tzs_A 209 NIQVGGTVMFC-------SEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP 252 (351)
T ss_dssp EEEETTEEEEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred EEEECCceEEc-------CCCceEEeccCCcceeCCHHHHHHHHHHhCCcc
Confidence 99999987531 235679999999999999999999999997754
No 7
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.9e-41 Score=328.65 Aligned_cols=261 Identities=23% Similarity=0.356 Sum_probs=199.6
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC---
Q 018082 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG--- 147 (361)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~--- 147 (361)
+.+++|+++|.||||+|+|.|+|||||+++||+|..| .+|+|++.++|.++.|......
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~~C~~~~~~~c~ 79 (403)
T 3aup_A 18 GSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHSTQCSRANTHQCL 79 (403)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBHHHHHTTCCCEE
T ss_pred CCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCccccCccccCcc
Confidence 4678999999999999999999999999999997653 3688999999999989876543
Q ss_pred -----CCCCCCCCCCCcceeeeC-CCCeEEEEEEEEEEEEecccCCcc---ccccCceeeeeeeeeccCC-CCCCCCCCc
Q 018082 148 -----PLTDCTANTSCPYLEIYG-DGSSTTGYFVQDVVQYDKVSGDLQ---TTSTNGSLIFGCGARQSGN-LDSTNEEAL 217 (361)
Q Consensus 148 -----~~~~c~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~~~~~~~~~~---~~~~~~~~~fg~~~~~~~~-~~~~~~~~~ 217 (361)
....|. ++.|.|.+.|+ +|+.+.|.+++|+|+|++..+.++ ....++++.|||++..... + ....+
T Consensus 80 ~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~---~~~~~ 155 (403)
T 3aup_A 80 SCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKG---LPRNT 155 (403)
T ss_dssp ECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSS---SSTTC
T ss_pred ccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccC---CCCCC
Confidence 123453 35799999998 788889999999999998443210 0123678999999987543 2 23568
Q ss_pred ceEeecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCcceEEecCcCC-------C-----CceEecCCCC-CCceEEEE
Q 018082 218 DGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ-------P-----EVNKTPLVPN-QPHYSINM 283 (361)
Q Consensus 218 ~GIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~-~~~G~l~~Gg~d~-------~-----~~~~~p~~~~-~~~w~v~l 283 (361)
+||||||++..+++.||++..+.+++||+||.+. ...|.|+||| |+ + ++.|+|++.+ ..+|.|.|
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l 234 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRV 234 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECE
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEE
Confidence 9999999999999999976544479999999884 5689999999 63 3 7899999865 36999999
Q ss_pred eEEEEcCEEe-ecCCcccc--cCCCccEEEcccccccccChHHHHHHHHHHHhhCCCCcc-ccccCcCceeeccC
Q 018082 284 TAVQVGLDFL-NLPTDVFG--VGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKV-HTVHDEYTCFQYSE 354 (361)
Q Consensus 284 ~~i~v~g~~~-~~~~~~~~--~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~~~~~-~~~~~~~~C~~~~~ 354 (361)
++|+|+++.+ .++...+. ..+...+||||||++++||++++++|+++|.+++..... .....+.+||+-+.
T Consensus 235 ~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~ 309 (403)
T 3aup_A 235 NSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNK 309 (403)
T ss_dssp EEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGG
T ss_pred EEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCC
Confidence 9999999988 65554442 123457999999999999999999999999877653221 12234458987653
No 8
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.8e-42 Score=325.00 Aligned_cols=216 Identities=23% Similarity=0.375 Sum_probs=185.0
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 69 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-------HQRFDPRKSSTFQNL------------- 69 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-------CCCCCCccCCCeEEC-------------
Confidence 456789999999999999999999999999999999984 5654 378999999999983
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCC-CCCCCCCCcceEeecCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKS 226 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~~ 226 (361)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||+....+. | ....++||||||++
T Consensus 70 ---------~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~---~~~~~~GilGLg~~ 128 (323)
T 3cms_A 70 ---------GKPLSIHYGTGS-MQGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDFF---TYAEFDGILGMAYP 128 (323)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH---HHSSCSEEEECSCG
T ss_pred ---------CcEEEEEeCCCC-eEEEEEEEEEEECCeE--------EeccEEEEEEecccccc---cccCCceEEecCcc
Confidence 478999999998 5999999999998754 458999999987542 2 12457999999987
Q ss_pred CC------cHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEeec
Q 018082 227 NS------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (361)
Q Consensus 227 ~~------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~ 295 (361)
.. +++++|++||+| +++||+||.+....|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 ~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (323)
T 3cms_A 129 SLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVAC 207 (323)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEES
T ss_pred hhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeec
Confidence 53 589999999999 6999999998644599999999974 58899997 468999999999999987753
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 018082 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (361)
Q Consensus 296 ~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~ 334 (361)
+ ....+||||||+++++|++++++|.+++++.
T Consensus 208 ~-------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 239 (323)
T 3cms_A 208 E-------GGCQAILDTGTSKLVGPSSDILNIQQAIGAT 239 (323)
T ss_dssp T-------TCEEEEECTTCCSEEECHHHHHHHHHHHTCE
T ss_pred C-------CCcEEEEecCCccEeCCHHHHHHHHHHhCCe
Confidence 2 3467999999999999999999999999765
No 9
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=4e-42 Score=323.51 Aligned_cols=218 Identities=24% Similarity=0.411 Sum_probs=186.6
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~--C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|.. |.. ++.|||++|+|++..
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 66 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN-------HHRFDPRKSSTFRNL------------- 66 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC-------CCCCCCCCCcCeEcC-------------
Confidence 5678899999999999999999999999999999999873 543 379999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (361)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.||++....+... .....+||||||++.
T Consensus 67 ---------~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 126 (320)
T 4aa9_A 67 ---------GKPLSIHYGTGS-MEGFLGYDTVTVSNIV--------DPNQTVGLSTEQPGEVF--TYSEFDGILGLAYPS 126 (320)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH--HSCCCSEEEECSCGG
T ss_pred ---------CcEEEEEECCcE-EEEEEEEEEEEECCEe--------ecCeEEEEEEEcccccc--cccCcccEEecCccc
Confidence 378999999998 5999999999998854 55899999998765211 234579999999864
Q ss_pred ------CcHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEeecC
Q 018082 228 ------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (361)
Q Consensus 228 ------~s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~ 296 (361)
.+++++|++||+| +++||+||.+....|.|+|||+|+. ++.|+|+. ++.+|.|.+++|+|+++.+..+
T Consensus 127 ~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~ 205 (320)
T 4aa9_A 127 LASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTINGVAVACV 205 (320)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEETTEEEEST
T ss_pred ccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEECCEEeccC
Confidence 3599999999999 6999999998546899999999974 58899997 5689999999999999887532
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 297 ~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
....+||||||+++++|++++++|++++++..
T Consensus 206 -------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~ 237 (320)
T 4aa9_A 206 -------GGCQAILDTGTSVLFGPSSDILKIQMAIGATE 237 (320)
T ss_dssp -------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEE
T ss_pred -------CCcEEEEECCCCcEECCHHHHHHHHHHhCCcc
Confidence 34579999999999999999999999997654
No 10
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.3e-41 Score=325.21 Aligned_cols=220 Identities=24% Similarity=0.379 Sum_probs=187.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~---~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~ 146 (361)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|. .|..+ +.|||++|+|++..
T Consensus 14 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~------------ 74 (361)
T 1mpp_A 14 DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKET------------ 74 (361)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEEE------------
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEec------------
Confidence 456789999999999999999999999999999999997 67643 78999999999984
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccC-----CCCCCCCCCcceEe
Q 018082 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-----NLDSTNEEALDGII 221 (361)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~-----~~~~~~~~~~~GIl 221 (361)
.|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .+. ....++|||
T Consensus 75 ----------~~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~~~~~--~~~~~~Gil 133 (361)
T 1mpp_A 75 ----------DYNLNITYGTGG-ANGIYFRDSITVGGAT--------VKQQTLAYVDNVSGPTAEQSPD--SELFLDGIF 133 (361)
T ss_dssp ----------EEEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEESGGGSSCTT--CSSCCCEEE
T ss_pred ----------CCeEEEEECCce-EEEEEEEEEEEECCEE--------EeceEEEEEEeccCcccccccc--ccCCCCCEE
Confidence 378999999999 5999999999998754 55899999998765 221 245689999
Q ss_pred ecCCCC------------CcHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCC----CCceEecCCCCCC---ceEE
Q 018082 222 GFGKSN------------SSMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQP---HYSI 281 (361)
Q Consensus 222 GLg~~~------------~s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~---~w~v 281 (361)
|||++. .+++++|++||+| +++||+||.+....|.|+|||+|+ +++.|+|+..... +|.|
T Consensus 134 GLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v 213 (361)
T 1mpp_A 134 GAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDA 213 (361)
T ss_dssp ECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEE
T ss_pred EeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEE
Confidence 999863 4588899999999 699999999854589999999985 5689999985544 8999
Q ss_pred EEeEEEEcCEEeecCCcccccCCCccEE-EcccccccccChHHHHHHHHHHHhhCC
Q 018082 282 NMTAVQVGLDFLNLPTDVFGVGDNKGTI-IDSGTTLAYLPEMVYEPLVSKIISQQP 336 (361)
Q Consensus 282 ~l~~i~v~g~~~~~~~~~~~~~~~~~ai-iDTGtt~~~lp~~~~~~i~~~i~~~~~ 336 (361)
.|++|+|+++.+... ....+| |||||++++||++++++|+++++++++
T Consensus 214 ~l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~ 262 (361)
T 1mpp_A 214 PVTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT 262 (361)
T ss_dssp EEEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE
T ss_pred EEeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc
Confidence 999999999876421 235699 999999999999999999999987653
No 11
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=1.9e-41 Score=334.19 Aligned_cols=218 Identities=28% Similarity=0.403 Sum_probs=184.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC---CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~---~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~ 146 (361)
++.+.+|+++|.||||+|+|+|+|||||+++||+|..|. .|.. ++.|||++|+|++.
T Consensus 48 n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~-------~~~y~~~~SsT~~~------------- 107 (478)
T 1qdm_A 48 NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL-------HSRYKAGASSTYKK------------- 107 (478)
T ss_dssp CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG-------SCCBCGGGCTTCBC-------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC-------CCCCCcccCCCeee-------------
Confidence 456789999999999999999999999999999999885 4543 47899999999987
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCC
Q 018082 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKS 226 (361)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~ 226 (361)
..+.|.+.|++|+ +.|.+++|+|+|++.. ++++.||+++...+... ....+|||||||++
T Consensus 108 ---------~~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~f--~~~~~dGIlGLg~~ 167 (478)
T 1qdm_A 108 ---------NGKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGITF--LVAKFDGILGLGFK 167 (478)
T ss_dssp ---------CCCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSHH--HHCSSSEEEECSCG
T ss_pred ---------CCcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCccc--ccccccceeccccc
Confidence 3578999999998 5999999999998754 45899999997654211 23467999999997
Q ss_pred CCc------HHHHhhhcCCC-CCceEEeecCC---CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEE
Q 018082 227 NSS------MISQLASSGGV-RKMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDF 292 (361)
Q Consensus 227 ~~s------~~~~l~~~g~i-~~~Fs~~l~~~---~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~ 292 (361)
..+ ++.+|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.
T Consensus 168 ~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~l~~i~v~g~~ 246 (478)
T 1qdm_A 168 EISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFDMGDVLVGGKS 246 (478)
T ss_dssp GGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEEECCEEETTEE
T ss_pred ccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEEEeEEEECCEE
Confidence 653 78999999999 69999999874 34799999999975 47899996 468999999999999987
Q ss_pred eecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 018082 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (361)
Q Consensus 293 ~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~ 334 (361)
+.+. ..+..+|+||||+++++|++++++|.++|++.
T Consensus 247 ~~~~------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~ 282 (478)
T 1qdm_A 247 TGFC------AGGCAAIADSGTSLLAGPTAIITEINEKIGAA 282 (478)
T ss_dssp CSTT------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCC
T ss_pred Eeec------CCCceEEEcCCCCceeCCHHHHHHHHHHhCcc
Confidence 6543 23567999999999999999999999999764
No 12
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=9.6e-42 Score=321.45 Aligned_cols=216 Identities=23% Similarity=0.389 Sum_probs=185.7
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 8 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 67 (324)
T 1am5_A 8 NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-------HNKFKPRQSSTYVET------------- 67 (324)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-------SCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-------CCcCCCccCCCeEeC-------------
Confidence 456789999999999999999999999999999999987 4654 378999999999973
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (361)
.|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||+....+.+. ....++||||||++.
T Consensus 68 ---------~~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 127 (324)
T 1am5_A 68 ---------GKTVDLTYGTGGM-RGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQ--AAAPFDGILGLAYPS 127 (324)
T ss_dssp ---------EEEEEEECSSCEE-EEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTT--TTCSSSEEEECSCGG
T ss_pred ---------CcEEEEEECCCCe-EEEEEECceeECCcE--------EcccEEEEEEecccccc--cCCCCceEEecCCcc
Confidence 4789999999986 999999999998754 45899999998765322 245789999999975
Q ss_pred C------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcCEEeec
Q 018082 228 S------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (361)
Q Consensus 228 ~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~ 295 (361)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 128 ~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 206 (324)
T 1am5_A 128 IAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGITVNGQTAAC 206 (324)
T ss_dssp GCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEEETTEECCC
T ss_pred ccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEEECCceeec
Confidence 4 589999999999 69999999885 3489999999995 568999997 467999999999999987531
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 018082 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (361)
Q Consensus 296 ~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~ 334 (361)
.+ ..+||||||+++++|++++++|.+++++.
T Consensus 207 -------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 207 -------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp -------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred -------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 12 67999999999999999999999999775
No 13
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.4e-41 Score=320.91 Aligned_cols=215 Identities=26% Similarity=0.466 Sum_probs=183.9
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~--C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+..|+++|.||||+|+++|+|||||+++||+|..|.. |..+ +.|||++|+|++.
T Consensus 9 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~-------------- 67 (329)
T 1dpj_A 9 NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYKA-------------- 67 (329)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeEE--------------
Confidence 4567899999999999999999999999999999999986 6443 7899999999987
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccC-CCCCCCCCCcceEeecCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEALDGIIGFGKS 226 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~-~~~~~~~~~~~GIlGLg~~ 226 (361)
..|.|.+.|++|+ +.|.+++|+|+|++.. ++++.||+++...+ .| ....++||||||++
T Consensus 68 --------~~~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~f---~~~~~~GilGLg~~ 127 (329)
T 1dpj_A 68 --------NGTEFAIQYGTGS-LEGYISQDTLSIGDLT--------IPKQDFAEATSEPGLTF---AFGKFDGILGLGYD 127 (329)
T ss_dssp --------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCHHHH---TTCSCSEEEECSCG
T ss_pred --------CCcEEEEEECCce-EEEEEEEEEEEECCeE--------ECCeEEEEEEecCcccc---ccCCcceEEEeCCc
Confidence 3478999999995 6999999999998754 55899999998754 23 23468999999997
Q ss_pred CC------cHHHHhhhcCCC-CCceEEeecCCC----CcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCE
Q 018082 227 NS------SMISQLASSGGV-RKMFAHCLDGIN----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (361)
Q Consensus 227 ~~------s~~~~l~~~g~i-~~~Fs~~l~~~~----~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~ 291 (361)
.. +++++|++||+| +++||+||.+.. ..|.|+|||+|+. ++.|+|+. ++.+|.|.+++|+|+++
T Consensus 128 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 128 TISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTE
T ss_pred hhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEEeeeEEECCe
Confidence 64 478999999999 699999997742 3799999999964 58899997 46899999999999998
Q ss_pred EeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 018082 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (361)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~ 334 (361)
.+.. ....+||||||+++++|++++++|.+++++.
T Consensus 207 ~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~ 241 (329)
T 1dpj_A 207 YAEL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGAK 241 (329)
T ss_dssp EEEC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTCE
T ss_pred EecC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCCc
Confidence 7742 2457999999999999999999999999765
No 14
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.8e-41 Score=318.96 Aligned_cols=218 Identities=24% Similarity=0.439 Sum_probs=185.7
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCC--CCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCC
Q 018082 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP 148 (361)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~--C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~ 148 (361)
+.+.+|+++|.||||+|+++|+|||||+++||+|..|.. |.. ++.|||++|+|++..
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~-------------- 67 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-------HSRFNPSESSTYSTN-------------- 67 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEE--------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-------CCcCCCccCCCeEEC--------------
Confidence 467899999999999999999999999999999999873 654 378999999999973
Q ss_pred CCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC
Q 018082 149 LTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS 228 (361)
Q Consensus 149 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~ 228 (361)
.|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||+....+.+. .....+||||||++..
T Consensus 68 --------~~~~~i~Yg~gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 68 --------GQTFSLQYGSGSL-TGFFGYDTLTVQSIQ--------VPNQEFGLSENEPGTNF--VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp --------EEEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEESSCSSGGG--GGCSCCEEEECCCCSC
T ss_pred --------CcEEEEEeCCCCe-EEEEEeeeEEEcceE--------ECceEEEEEEEcccccc--ccCCCceEEecCCCcc
Confidence 4789999999986 999999999998754 55899999998755321 2356899999999764
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCC-C-cceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEeec
Q 018082 229 ------SMISQLASSGGV-RKMFAHCLDGIN-G-GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (361)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~-~-~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~ 295 (361)
+++++|++||+| +++||+||.+.. . .|.|+|||+|+. ++.|+|+. ...+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 589999999999 699999999852 2 799999999964 58899997 468999999999999987531
Q ss_pred CCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 296 ~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
......+||||||++++||++++++|.+++++..
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~ 241 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE 241 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCee
Confidence 1235679999999999999999999999997764
No 15
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.3e-41 Score=320.18 Aligned_cols=215 Identities=20% Similarity=0.326 Sum_probs=183.4
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCCCCCC--CCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~--~c~~C~~--~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
.+.+|+++|.||||+|+++|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL------------- 76 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE-------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC-------------
Confidence 3678999999999999999999999999999976 6765421 1223555689999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (361)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 77 ---------NQDFSIEYGDLTSSQGSFYKDTVGFGGIS--------IKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ---------EEEEEEEBTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ---------CCceEEEECCCCEEEEEEEEEEEEECCEE--------EccEEEEEEEecC---------CCccEEEEcCCc
Confidence 47899999999988999999999998754 5589999999753 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCCCC----ceEecCCCCCCceEEEEeEEEEcCEEe
Q 018082 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQPE----VNKTPLVPNQPHYSINMTAVQVGLDFL 293 (361)
Q Consensus 228 ~--------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~~----~~~~p~~~~~~~w~v~l~~i~v~g~~~ 293 (361)
. +++++|++||+| +++||+||.+. ...|.|+|||+|+.+ +.|+|+. ...+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 3 799999999999 69999999874 467999999999764 7899997 4569999999999999887
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
.. ...+||||||++++||++++++|++++++++
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATW 242 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcc
Confidence 53 2459999999999999999999999998876
No 16
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.5e-41 Score=320.87 Aligned_cols=215 Identities=26% Similarity=0.367 Sum_probs=182.0
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCC
Q 018082 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (361)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (361)
+.+.+|+++|.||||+|+++|+|||||+++||+|..|..|..+ .++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~-----~~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT-----GHAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC-----CCCcCCcccCcCceEcC---------------
Confidence 4677899999999999999999999999999999999877432 24799999999999753
Q ss_pred CCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC--
Q 018082 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (361)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (361)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||++...++.+. ....++||||||++..
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGFS--------VNTQGVESATRVSTEFV--QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceeEEeCcccccc
Confidence 46899999999977999999999998754 55899999998765431 1246799999998643
Q ss_pred -------cHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcCEEeecC
Q 018082 229 -------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (361)
Q Consensus 229 -------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~ 296 (361)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++..+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 489999986 6 7999999987 5689999999995 568999998667899999999999987653
Q ss_pred CcccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018082 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (361)
Q Consensus 297 ~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~ 332 (361)
.....+||||||++++||++++++|++++.
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~ 240 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQ 240 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCT
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCC
Confidence 124579999999999999999999988873
No 17
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.9e-41 Score=320.45 Aligned_cols=215 Identities=23% Similarity=0.353 Sum_probs=183.7
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCC--CCCCCCC--CCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~--~c~~C~~--~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
.+.+|+++|.||||+|+++|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL------------- 76 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE-------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC-------------
Confidence 4678999999999999999999999999999976 6765432 1234556689999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (361)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 77 ---------NTRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ---------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ---------CCcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC---------CCcCEEEEcccc
Confidence 37899999999988999999999998754 5589999999753 368999999975
Q ss_pred C--------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEe
Q 018082 228 S--------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (361)
Q Consensus 228 ~--------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~ 293 (361)
. +++.+|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+.. ..+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITS-EKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC-SSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccC-CceEEEEEeEEEECCEec
Confidence 3 799999999999 69999999874 46799999999864 589999974 569999999999999887
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
.. ...+||||||++++||++++++|++++++++
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQM 242 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCee
Confidence 53 2459999999999999999999999998765
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.2e-41 Score=319.60 Aligned_cols=213 Identities=23% Similarity=0.387 Sum_probs=180.9
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (361)
.+..|+++|.||||+|+++|+|||||+++||+|..|..|.. .++.|||++|+|++.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 57789999999999999999999999999999999987753 24799999999999853
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC---
Q 018082 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (361)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (361)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++..++.+. ....++||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGLT--------VTGQAVESAKKVSSSFT--EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EeeeEEEEEEecCcccc--ccCCCceEEEecccccccc
Confidence 36899999999977999999999998754 55899999998765432 1245799999998643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcCEEeecCC
Q 018082 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (361)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (361)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.+++.+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--- 209 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE---
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc---
Confidence 488999987 6 7999999987 5689999999996 468999998667899999999999987653
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018082 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (361)
Q Consensus 298 ~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~ 332 (361)
.....+||||||+++++|++++++|++++.
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~ 239 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQVS 239 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhCC
Confidence 123469999999999999999999988873
No 19
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.6e-41 Score=322.17 Aligned_cols=220 Identities=24% Similarity=0.398 Sum_probs=185.9
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (361)
++.+.+|+++|.||||+|+++|+|||||+++||+|..|..|. ..|..++.|||++|+|++.
T Consensus 14 n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~---~~C~~~~~y~~~~SsT~~~---------------- 74 (341)
T 3k1w_A 14 NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLY---TACVYHKLFDASDSSSYKH---------------- 74 (341)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTC---HHHHTSCCBCGGGCTTCEE----------------
T ss_pred EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCC---CcccCCCCCCCCcCcCeeE----------------
Confidence 456889999999999999999999999999999999987321 1122347999999999987
Q ss_pred CCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCC-CCCCCCCCcceEeecCCCCC
Q 018082 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGN-LDSTNEEALDGIIGFGKSNS 228 (361)
Q Consensus 150 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~-~~~~~~~~~~GIlGLg~~~~ 228 (361)
..|.|.+.|++|+ +.|.+++|+|+|++.. + ++.||+++...+. + ....++||||||++..
T Consensus 75 ------~~~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~~---~~~~~~GilGLg~~~~ 135 (341)
T 3k1w_A 75 ------NGTELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALPF---MLAEFDGVVGMGFIEQ 135 (341)
T ss_dssp ------EEEEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHHH---TTCSSSEEEECSCGGG
T ss_pred ------CCCEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEcccccc---ccCCcceEEECCchhh
Confidence 3478999999998 6999999999998754 5 8999999987653 3 2356899999999765
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCC-----CcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEE
Q 018082 229 ------SMISQLASSGGV-RKMFAHCLDGIN-----GGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDF 292 (361)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~-----~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~ 292 (361)
+++++|++||+| +++||+||.+.. ..|.|+|||+|+. ++.|+|+. ++.+|.|.+++|+|+++.
T Consensus 136 s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~ 214 (341)
T 3k1w_A 136 AIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQMKGVSVGSST 214 (341)
T ss_dssp CGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEECCEEETTEE
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEEeEEEECCEE
Confidence 489999999999 699999999852 2799999999975 57899997 578999999999999987
Q ss_pred eecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 293 ~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
+.. .....+||||||+++++|++++++|++++++.+
T Consensus 215 ~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~ 250 (341)
T 3k1w_A 215 LLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKK 250 (341)
T ss_dssp EEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred eec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCee
Confidence 532 234679999999999999999999999997764
No 20
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.6e-41 Score=323.39 Aligned_cols=212 Identities=21% Similarity=0.378 Sum_probs=182.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~------------- 117 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-------KNLYDSSKSKSYEKD------------- 117 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-------SCCBCGGGCTTCEEE-------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-------CCcCCCccCCceEEC-------------
Confidence 456789999999999999999999999999999999986 4543 479999999999973
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeee----ccCCCCCCCCCCcceEeec
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (361)
.|.|.+.|++|+ +.|.+++|+|+|++.. +++ .|||+.. ++ .| ....++|||||
T Consensus 118 ---------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f---~~~~~dGilGL 174 (375)
T 1miq_A 118 ---------GTKVDITYGSGT-VKGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IY---SSVEFDGILGL 174 (375)
T ss_dssp ---------EEEEEEEETTEE-EEEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HH---HHSCCCEEEEC
T ss_pred ---------CcEEEEEeCCCe-EEEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cc---ccCCCceEEeC
Confidence 478999999999 5999999999998754 458 9999998 44 33 13467999999
Q ss_pred CCCCC------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCE
Q 018082 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (361)
Q Consensus 224 g~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~ 291 (361)
|++.. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. +..+|.|.++ |+|+++
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~-i~v~g~ 252 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDLD-VHFGKQ 252 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEEE-EEECCE
Confidence 99764 589999999999 69999999985 34899999999964 58899996 5689999999 999998
Q ss_pred EeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 018082 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (361)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~ 336 (361)
.+ ....+||||||+++++|++++++|+++++++++
T Consensus 253 ~~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~ 287 (375)
T 1miq_A 253 TM----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKV 287 (375)
T ss_dssp EE----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEC
T ss_pred Ec----------ccceEEecCCCccEEcCHHHHHHHHHHhCCccc
Confidence 76 135699999999999999999999999987644
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.3e-40 Score=315.93 Aligned_cols=216 Identities=25% Similarity=0.384 Sum_probs=184.9
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCC--CCCCCCC--CCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~--c~~C~~~--~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
.+.+|+++|.||||+|+++|+|||||+++||++.. |..|..+ ...|..++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------------- 76 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDL------------- 76 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEE-------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeec-------------
Confidence 46789999999999999999999999999999865 7655321 234555689999999999984
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (361)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++... ..+||||||++.
T Consensus 77 ---------~~~~~i~Yg~gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 77 ---------NTPFKIGYGDGSSSQGTLYKDTVGFGGVS--------IKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ---------EEEEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ---------CCeEEEEecCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEccC---------CCccEEEecCcc
Confidence 37899999999978999999999999754 5589999998754 368999999986
Q ss_pred -------CcHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEee
Q 018082 228 -------SSMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (361)
Q Consensus 228 -------~s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~ 294 (361)
.+++.+|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+.. ..+|.|.+++|+|+++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTS-DRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCC-SSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCc-cceEEEEEeEEEECCEEec
Confidence 4799999999999 69999999875 35799999999964 589999974 5699999999999999875
Q ss_pred cCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 295 ~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
.. ...+||||||++++||++++++|++++++.+
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 242 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKL 242 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEE
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCee
Confidence 32 2469999999999999999999999998765
No 22
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.2e-40 Score=314.11 Aligned_cols=209 Identities=23% Similarity=0.346 Sum_probs=179.9
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCC-----CCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI-----QCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~-----~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~ 146 (361)
.+.+|+++|.||||+|+++|+|||||+++||++. .|..|.. ++.|||++|+|++..
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~------------ 70 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS-------SGTFTPSSSSSYKNL------------ 70 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT-------TCCBCGGGCTTCEEE------------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC-------CCcCCCccCcceeeC------------
Confidence 3568999999999999999999999999999854 4445543 479999999999984
Q ss_pred CCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCC
Q 018082 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKS 226 (361)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~ 226 (361)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++.... .+||||||++
T Consensus 71 ----------~~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~---------~~GilGLg~~ 123 (339)
T 3fv3_A 71 ----------GAAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV---------DQGILGIGYT 123 (339)
T ss_dssp ----------EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS---------SSCEEECSCG
T ss_pred ----------CceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC---------CceeEEecCc
Confidence 37899999999888999999999999754 55899999998642 5899999987
Q ss_pred CC----------------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCC----CCceEecCCCCCCceEEEEe
Q 018082 227 NS----------------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (361)
Q Consensus 227 ~~----------------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~ 284 (361)
.. +|+++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+.. ..+|.|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~-~~~~~v~l~ 202 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTS-SQALTISLA 202 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCC-SSSCEEEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEeccc-CccEEEEEE
Confidence 53 389999999999 69999999875 3589999999986 4689999974 569999999
Q ss_pred EEEEcCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 018082 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (361)
Q Consensus 285 ~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~ 336 (361)
+|+|+++.+... ..++|||||++++||++++++|++++++.+.
T Consensus 203 ~i~v~g~~~~~~---------~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~ 245 (339)
T 3fv3_A 203 SVNLKGSSFSFG---------DGALLDSGTTLTYFPSDFAAQLADKAGARLV 245 (339)
T ss_dssp EEEESSCEEEEE---------EEEEECTTBSSEEECHHHHHHHHHHHTCEEE
T ss_pred EEEECCEeecCC---------ccEEEeCCCCCEecCHHHHHHHHHHcCCEEc
Confidence 999999877532 4599999999999999999999999987653
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.1e-40 Score=326.14 Aligned_cols=212 Identities=20% Similarity=0.332 Sum_probs=182.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+..|+++|+||||+|++.|++||||+++||+|..|. .|.. ++.|||++|+|++.
T Consensus 133 n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~-------~~~ydps~SsT~~~-------------- 191 (451)
T 3qvc_A 133 DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES-------KNHYDSSKSKTYEK-------------- 191 (451)
T ss_dssp GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT-------SCCBCGGGCTTCEE--------------
T ss_pred ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC-------CCCCCCCCCccccc--------------
Confidence 567889999999999999999999999999999999984 5654 37999999999997
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeee----ccCCCCCCCCCCcceEeec
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEEALDGIIGF 223 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~----~~~~~~~~~~~~~~GIlGL 223 (361)
..+.|.+.|++|+ +.|.+++|+|++++.. ++ +.||+++. .++ + .....+|||||
T Consensus 192 --------~~~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f---~~~~~dGILGL 249 (451)
T 3qvc_A 192 --------DDTPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-Y---SESDVDGVFGL 249 (451)
T ss_dssp --------EEEEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-H---HHSCCCEEEEC
T ss_pred --------CCCEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-c---cCCCCCEEEec
Confidence 3478999999999 7999999999998754 56 99999998 554 3 23467999999
Q ss_pred CCCCC------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCE
Q 018082 224 GKSNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLD 291 (361)
Q Consensus 224 g~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~ 291 (361)
|++.. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. ++.+|.|.++ |+|+++
T Consensus 250 g~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~l~-I~Vgg~ 327 (451)
T 3qvc_A 250 GWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVDLD-VHFGNV 327 (451)
T ss_dssp SSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEEEE-EEETTE
T ss_pred CCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEEEE-EEECCc
Confidence 99753 699999999999 69999999986 34799999999974 58999997 5789999999 999987
Q ss_pred EeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 018082 292 FLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (361)
Q Consensus 292 ~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~ 336 (361)
. .....+||||||+++++|++++++|.+++++.+.
T Consensus 328 -~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~ 362 (451)
T 3qvc_A 328 -S---------SKKANVILDSATSVITVPTEFFNQFVESASVFKV 362 (451)
T ss_dssp -E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEEC
T ss_pred -c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeec
Confidence 1 1245699999999999999999999999876643
No 24
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=5.2e-40 Score=323.20 Aligned_cols=238 Identities=22% Similarity=0.294 Sum_probs=190.8
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCC
Q 018082 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (361)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (361)
..+..|+++|.||||+|+|+|+|||||+++||+|..| |.. ++.|||++|+|++..
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-------~~~y~~~~SsT~~~~---------------- 125 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDL---------------- 125 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEE----------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-------CCcccCCCCCCcccC----------------
Confidence 3456899999999999999999999999999999887 432 379999999999984
Q ss_pred CCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecc-cCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC--
Q 018082 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKV-SGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN-- 227 (361)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~-~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~-- 227 (361)
.|.|.+.|++|+. .|.+++|+|+|++. .. ...+.|+++.+....|. ....++||||||++.
T Consensus 126 ------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s 189 (455)
T 3lpj_A 126 ------RKGVYVPYTQGKW-EGELGTDLVSIPHGPNV-------TVRANIAAITESDKFFI--NGSNWEGILGLAYAEIA 189 (455)
T ss_dssp ------EEEEEEECSSCEE-EEEEEEEEEECTTSCSC-------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGC
T ss_pred ------CccEEEEeCCeEE-EEEEEEEEEEECCCcce-------eeEEEEEEEEccCcccc--cCCCcceEEEeCccccc
Confidence 3789999999996 99999999999852 11 11357888887665542 235689999999864
Q ss_pred ------CcHHHHhhhcCCCCCceEEeecCC-----------CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEE
Q 018082 228 ------SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAV 286 (361)
Q Consensus 228 ------~s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i 286 (361)
.+++++|++|++|+++||+||.+. ...|.|+|||+|+. ++.|+|+. ...+|.|.+++|
T Consensus 190 ~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i 268 (455)
T 3lpj_A 190 RPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRV 268 (455)
T ss_dssp SSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEE
T ss_pred cccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEE
Confidence 368999999999988999999752 35799999999974 57899997 468999999999
Q ss_pred EEcCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCCCCcccc---ccCcCceeecc
Q 018082 287 QVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYS 353 (361)
Q Consensus 287 ~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~---~~~~~~C~~~~ 353 (361)
+|+++.+.++...+ ....+||||||++++||++++++|+++|.+.....+... ......|++.+
T Consensus 269 ~v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~ 335 (455)
T 3lpj_A 269 EINGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 335 (455)
T ss_dssp EETTEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTT
T ss_pred EECCEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceeccccc
Confidence 99999887654432 246799999999999999999999999999865221111 11134688764
No 25
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=9e-40 Score=314.85 Aligned_cols=222 Identities=25% Similarity=0.342 Sum_probs=182.3
Q ss_pred CCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCC
Q 018082 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (361)
Q Consensus 71 ~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~ 150 (361)
..+..|+++|.||||+|+++|+|||||+++||+|..|..|. +.|||++|+|++..
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~---------------- 64 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSK---------------- 64 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEE----------------
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeC----------------
Confidence 34568999999999999999999999999999998887663 68999999999984
Q ss_pred CCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC--
Q 018082 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (361)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (361)
.|.|.+.|++|+. .|.+++|+|+|++.... ...+.|++..+..+.|. ....++||||||++..
T Consensus 65 ------~~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~dGilGLg~~~~s~ 129 (383)
T 2ewy_A 65 ------GFDVTVKYTQGSW-TGFVGEDLVTIPKGFNT------SFLVNIATIFESENFFL--PGIKWNGILGLAYATLAK 129 (383)
T ss_dssp ------EEEEEEECSSCEE-EEEEEEEEEEETTTEEE------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------CceEEEEECCcEE-EEEEEEEEEEECCCccc------eeEEEEEEEEeecceee--ccCcCceEEecCchhccc
Confidence 3789999999985 99999999999753211 11467888776555442 1346799999998653
Q ss_pred ------cHHHHhhhcCCCCCceEEeecC--------CCCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcC
Q 018082 229 ------SMISQLASSGGVRKMFAHCLDG--------INGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGL 290 (361)
Q Consensus 229 ------s~~~~l~~~g~i~~~Fs~~l~~--------~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g 290 (361)
+++++|++|+.|+++||+||.+ ....|.|+|||+|+ +++.|+|+. +..+|.|.+++|+|++
T Consensus 130 ~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g 208 (383)
T 2ewy_A 130 PSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGG 208 (383)
T ss_dssp SCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETT
T ss_pred ccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECC
Confidence 5899999999998899999963 14579999999985 568999997 4579999999999999
Q ss_pred EEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 018082 291 DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (361)
Q Consensus 291 ~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~ 336 (361)
+.+.++.+.+. ...+||||||++++||++++++|++++.+...
T Consensus 209 ~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 251 (383)
T 2ewy_A 209 QSLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARASL 251 (383)
T ss_dssp EECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTC
T ss_pred EEccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhcc
Confidence 98876544332 45799999999999999999999999998764
No 26
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.3e-39 Score=313.36 Aligned_cols=252 Identities=19% Similarity=0.325 Sum_probs=187.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~ 149 (361)
++.+.+|+++|.|||| |+|||||+++||+|..|. +++.++|.++.|........
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 4567899999999998 999999999999986541 24456676666654433323
Q ss_pred CCCCC--------CCCC-cceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceE
Q 018082 150 TDCTA--------NTSC-PYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGI 220 (361)
Q Consensus 150 ~~c~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GI 220 (361)
..|.. ++.| .|.+.|++|+.+.|.+++|+|+|++.++.........++.|||+..+.... ....+|||
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~---~~~~~dGI 140 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLAS---LPRGSTGV 140 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTT---SCTTEEEE
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCC---CCCCCceE
Confidence 34532 2346 599999999987999999999999753221111011124789998763211 12468999
Q ss_pred eecCCCCCcHHHHhhhcCCCCCceEEeecCCCCcceEEecCcCC------CCceEecCCCC--CCceEEEEeEEEEcCEE
Q 018082 221 IGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQ------PEVNKTPLVPN--QPHYSINMTAVQVGLDF 292 (361)
Q Consensus 221 lGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~~~~G~l~~Gg~d~------~~~~~~p~~~~--~~~w~v~l~~i~v~g~~ 292 (361)
||||++..+++.||+++++++++||+||.+. ..|+|+|||+|. +++.|+|++.+ ..+|+|+|++|+|+++.
T Consensus 141 lGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~ 219 (381)
T 1t6e_X 141 AGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTR 219 (381)
T ss_dssp EECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEE
T ss_pred EEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEE
Confidence 9999999999999999997789999999984 789999999874 46899999854 24688999999999998
Q ss_pred eecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC-------CCcc--ccccCcCceeeccC
Q 018082 293 LNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP-------DLKV--HTVHDEYTCFQYSE 354 (361)
Q Consensus 293 ~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~-------~~~~--~~~~~~~~C~~~~~ 354 (361)
+.++...|. .+.+||||||++++||++++++|.+++.+++. .... .....+..||+.+.
T Consensus 220 ~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~ 287 (381)
T 1t6e_X 220 VPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKT 287 (381)
T ss_dssp CCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGG
T ss_pred ecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCC
Confidence 876655443 45799999999999999999999999988653 1111 12233468998763
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=4e-39 Score=311.55 Aligned_cols=220 Identities=23% Similarity=0.288 Sum_probs=182.4
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (361)
.+..|+++|.||||+|+++|+|||||+++||+|..|..|. +.|||++|+|++..
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~~---------~~y~~~~SsT~~~~----------------- 72 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLH---------RYYQRQLSSTYRDL----------------- 72 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCS---------CCCCGGGCTTCEEE-----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCcccc---------CCcCcccCCCceeC-----------------
Confidence 4568999999999999999999999999999998886542 68999999999984
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEec-ccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC--
Q 018082 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (361)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~-- 228 (361)
.|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|+++.+..+.|. ....++||||||++..
T Consensus 73 -----~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~--~~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 73 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 137 (395)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -----CceEEEEECCcEE-EEEEEeEEEEECCCCCce-------EEEEEEEEEccCcccc--cccCccceEEcCchhhcc
Confidence 3789999999986 9999999999973 3221 1356787776555442 1346899999998643
Q ss_pred ------cHHHHhhhcCCCCCceEEeecCC-----------CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEE
Q 018082 229 ------SMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (361)
Q Consensus 229 ------s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (361)
+++++|++|++|+++||+||.+. ...|.|+|||+|+. ++.|+|+. +..+|.|.+++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 58999999999988999999752 35799999999964 58899997 4689999999999
Q ss_pred EcCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 018082 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (361)
Q Consensus 288 v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~ 336 (361)
|+++.+.++...+. ...+||||||++++||++++++|++++.+...
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~ 262 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASS 262 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTT
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcc
Confidence 99998866544332 35799999999999999999999999998864
No 28
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=6.6e-39 Score=310.72 Aligned_cols=237 Identities=22% Similarity=0.296 Sum_probs=187.1
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (361)
.+..|+++|.||||+|+++|+|||||+++||+|..| |.. ++.|+|++|+|++..
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-------~~~y~~~~SsT~~~~----------------- 79 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDL----------------- 79 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEE-----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-------cCCcCcccCcccccC-----------------
Confidence 345899999999999999999999999999999887 432 379999999999984
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEec-ccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC---
Q 018082 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (361)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~-~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~--- 227 (361)
.|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|+++......+. ....++||||||++.
T Consensus 80 -----~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 80 -----RKGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp -----EEEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -----CCEEEEEECcEEE-EEEEEEEEEEECCccccc-------eeeeEEEEEccccccc--cCCCccceEEcCchhhcc
Confidence 4789999999996 9999999999984 2211 1345787776655442 235689999999864
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecCC-----------CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEE
Q 018082 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQ 287 (361)
Q Consensus 228 -----~s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~ 287 (361)
.+++++|++|++|+++||+||.+. ...|.|+|||+|+. ++.|+|+. .+.+|.|.+++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEE
Confidence 369999999999988999999641 34799999999974 57899997 4689999999999
Q ss_pred EcCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCCCCcccc---ccCcCceeecc
Q 018082 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYS 353 (361)
Q Consensus 288 v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~~~~~~~---~~~~~~C~~~~ 353 (361)
|+++.+.++...+ ....+||||||++++||++++++|++++++.....+... ......|++.+
T Consensus 224 v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~ 289 (402)
T 3vf3_A 224 INGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 289 (402)
T ss_dssp ETTEECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETT
T ss_pred ECCEEeccccccc---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccc
Confidence 9999887654432 245799999999999999999999999999864211111 11134798754
No 29
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.3e-40 Score=325.14 Aligned_cols=212 Identities=21% Similarity=0.362 Sum_probs=180.1
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 134 n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~-------~~~ydps~SsT~~~~------------- 193 (453)
T 2bju_A 134 DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT-------KHLYDSSKSRTYEKD------------- 193 (453)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG-------SCCBCGGGCTTCEEE-------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC-------CCcCCCccCCceeEC-------------
Confidence 456789999999999999999999999999999999986 4543 479999999999983
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeecc--CCCCCCCCCCcceEeecCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQS--GNLDSTNEEALDGIIGFGK 225 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~--~~~~~~~~~~~~GIlGLg~ 225 (361)
.|.|.+.|++|+ +.|.+++|+|++++.. ++ +.|||++... +.+. ....++||||||+
T Consensus 194 ---------~~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f--~~~~~dGIlGLg~ 252 (453)
T 2bju_A 194 ---------GTKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY--TASTFDGILGLGW 252 (453)
T ss_dssp ---------EEEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH--HHSSCCEEEECSC
T ss_pred ---------CcEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc--cccCCceeEeccC
Confidence 478999999999 5999999999998743 56 9999999876 4211 1346899999999
Q ss_pred CCC------cHHHHhhhcCCC-CCceEEeecCC-CCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEe
Q 018082 226 SNS------SMISQLASSGGV-RKMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (361)
Q Consensus 226 ~~~------s~~~~l~~~g~i-~~~Fs~~l~~~-~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~ 293 (361)
+.. +++++|++||+| +++||+||.+. ...|.|+|||+|+. ++.|+|+. .+.+|.|.++ |+|+++ +
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~-I~Vgg~-~ 329 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD-AHVGNI-M 329 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-EEETTE-E
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-EEECcE-E
Confidence 753 589999999999 69999999985 35799999999964 58899996 4689999999 999993 3
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhh
Q 018082 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQ 334 (361)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~ 334 (361)
. ....+||||||+++++|++++++|++++++.
T Consensus 330 -~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~ 361 (453)
T 2bju_A 330 -L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDVI 361 (453)
T ss_dssp -E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSCE
T ss_pred -e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCCc
Confidence 1 2456999999999999999999999988764
No 30
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=7.2e-40 Score=309.36 Aligned_cols=215 Identities=15% Similarity=0.198 Sum_probs=182.4
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC--CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~--~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~ 147 (361)
++.+..|+++|.|| +|+++|+|||||+++||+|..|. .|.. ..++.|||++| |++..
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~~------------- 71 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYISD------------- 71 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEEE-------------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEEC-------------
Confidence 55678999999999 89999999999999999999986 5721 12379999999 99873
Q ss_pred CCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCC
Q 018082 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (361)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~ 227 (361)
.+.|.+.|++|+. .|.+++|+|+|++.. ++++.||+++.....| ....++||||||++.
T Consensus 72 ---------~~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------~~~~~fg~~~~~~~~f---~~~~~~GilGLg~~~ 130 (330)
T 1yg9_A 72 ---------GNVQVKFFDTGSA-VGRGIEDSLTISQLT--------TSQQDIVLADELSQEV---CILSADVVVGIAAPG 130 (330)
T ss_dssp ---------EEEEEEETTTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEEECTHH---HHTTCSEEEECSCTT
T ss_pred ---------CCEEEEEECCceE-EEEEEEEEEEECCEE--------EcCeEEEEEEEccccc---ccccCceEEEcCcch
Confidence 3689999999987 999999999998754 5589999999874323 234679999999987
Q ss_pred Cc-------HHHHhhhcCCCCCceEEeecCC-CC--cceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEe
Q 018082 228 SS-------MISQLASSGGVRKMFAHCLDGI-NG--GGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (361)
Q Consensus 228 ~s-------~~~~l~~~g~i~~~Fs~~l~~~-~~--~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~ 293 (361)
.+ ++++|++||+|+++||+||.+. .. .|.|+|||+|+. ++.|+|+. ++.+|.|.+++|+|+++.+
T Consensus 131 ~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~ 209 (330)
T 1yg9_A 131 CPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLDGVKIGDTTV 209 (330)
T ss_dssp SCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECSEEEETTEEE
T ss_pred hccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeCeEEECCEEE
Confidence 55 9999999998899999999885 22 799999999964 58899997 5789999999999999876
Q ss_pred ecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
. .....+||||||+++++|++++++|++++++.+
T Consensus 210 ~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~ 243 (330)
T 1yg9_A 210 A--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV 243 (330)
T ss_dssp E--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE
T ss_pred c--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCcc
Confidence 4 124679999999999999999999999997653
No 31
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=2e-39 Score=305.76 Aligned_cols=210 Identities=21% Similarity=0.332 Sum_probs=177.1
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (361)
.+.+|+++|.|| +|+++|+|||||+++||+|..|..|..+ .++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~------------------ 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT-----GHDLYTPSSSA-TKL------------------ 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT-----TSCCCBCCSSC-EEC------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC-----CCCCCCchhcC-Ccc------------------
Confidence 567899999999 8999999999999999999999876422 24799999998 443
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC---
Q 018082 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (361)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (361)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++...+.+. ....++||||||++..
T Consensus 66 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 ----SGYSWDISYGDGSSASGDVYRDTVTVGGVT--------TNKQAVEAASKISSEFV--QDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ----TTCBEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TSTTCCEEEECSCGGGCCC
T ss_pred ----CCCEEEEEeCCCCEEEEEEEEeEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceEEEeCccccccc
Confidence 358999999999977999999999998754 55899999998765432 1246899999999653
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcCEEeecCC
Q 018082 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (361)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (361)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.++..+|.|.+++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ--LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB---
T ss_pred CcCCCCCHHHHHHHh--cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc---
Confidence 478999987 6 7999999998 4689999999995 568999998667899999999999987653
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018082 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (361)
Q Consensus 298 ~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~ 332 (361)
.....+||||||+++++|++++++|++++.
T Consensus 206 -----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~ 235 (325)
T 1ibq_A 206 -----SSGFSAIADTGTTLILLDDEIVSAYYEQVS 235 (325)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCCcEeCCHHHHHHHHHhCC
Confidence 234679999999999999999999999883
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=8.7e-39 Score=301.07 Aligned_cols=209 Identities=24% Similarity=0.360 Sum_probs=175.3
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (361)
.+.+|+++|.|| +|+++|+|||||+++||+|..|..|..+ .++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS-----GHDYYTPGSSA-QKI------------------ 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TCCCBCCCTTC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc-----CCCCCCccccC-Ccc------------------
Confidence 567899999999 8999999999999999999999876422 24789999998 553
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC---
Q 018082 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (361)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (361)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++..++.+. ....++||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 ----DGATWSISYGDGSSASGDVYKDKVTVGGVS--------YDSQAVESAEKVSSEFT--QDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred ----CCCeEEEEcCCCCeEEEEEEEEEEEECCEE--------ECceEEEEEEecccccc--ccCCCceEEecCccccccc
Confidence 347999999999977999999999998754 55899999998765432 1245799999998643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCCC----CceEecCCCCCCceEEEEeEEEEcCEEeecCC
Q 018082 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (361)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (361)
+++++|+++ | +++||+||.+ +..|+|+|||+|+. ++.|+|+.+++.+|.|.+++|+|++ .+.
T Consensus 133 ~p~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~--- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS--LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS--- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE---
T ss_pred CCCCCCCHHHHHHHh--ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc---
Confidence 478999987 6 7999999997 46899999999975 4789999766789999999999998 442
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018082 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (361)
Q Consensus 298 ~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~ 332 (361)
.....+||||||+++++|++++++|++++.
T Consensus 206 -----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ 235 (323)
T 1izd_A 206 -----SDSITGIADTGTTLLLLDDSIVDAYYEQVN 235 (323)
T ss_dssp -----CCCEEEEECTTCCSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCcceeCCHHHHHHHHHhCC
Confidence 234679999999999999999999998874
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4.8e-38 Score=298.11 Aligned_cols=200 Identities=24% Similarity=0.403 Sum_probs=170.1
Q ss_pred ceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCCCC
Q 018082 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC 152 (361)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~~c 152 (361)
+..|+++|.||||+|+++|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~~------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSATS------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEEE-------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccccC-------------------
Confidence 458999999999999999999999999999752 4799988876543
Q ss_pred CCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC----
Q 018082 153 TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS---- 228 (361)
Q Consensus 153 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~---- 228 (361)
|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ |. .++||||||++..
T Consensus 57 -----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~--------v~~~~fg~~~~~~~-~~-----~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 57 -----DKVSVTYGSGS-FSGTEYTDTVTLGSLT--------IPKQSIGVASRDSG-FD-----GVDGILGVGPVDLTVGT 116 (340)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEES-CT-----TCSEEEECSCGGGGTTS
T ss_pred -----ceEEEEECCcE-EEEEEEEEEEEECCEE--------EcceEEEEEEccCC-Cc-----CCCcEEECCcccccccc
Confidence 78999999998 6999999999998754 56899999998754 32 4899999998643
Q ss_pred ----------cHHHHhhhcCCC-CCceEEeecCC----CCcceEEecCcCC----CCceEecCCCC---CCceEEEEeEE
Q 018082 229 ----------SMISQLASSGGV-RKMFAHCLDGI----NGGGIFAIGHVVQ----PEVNKTPLVPN---QPHYSINMTAV 286 (361)
Q Consensus 229 ----------s~~~~l~~~g~i-~~~Fs~~l~~~----~~~G~l~~Gg~d~----~~~~~~p~~~~---~~~w~v~l~~i 286 (361)
+++++|++||+| +++||+||.+. ...|.|+|||+|+ +++.|+|+... ..+|.|. .+|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 579999999999 69999999863 3479999999995 57899999864 5689999 999
Q ss_pred EEcC-EEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhCC
Q 018082 287 QVGL-DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP 336 (361)
Q Consensus 287 ~v~g-~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~~ 336 (361)
+|++ +.+.. ...+||||||++++||++++++|.+++++++.
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~ 237 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVAD 237 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEEC
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEc
Confidence 9998 76631 24699999999999999999999999887654
No 34
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=1.4e-38 Score=299.74 Aligned_cols=208 Identities=23% Similarity=0.368 Sum_probs=174.7
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCCCCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCCCCCCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~~~~~~~ 151 (361)
.+..|+++|.|| +|+++|+|||||+++||+|..|..|..+ .++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~-----~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS-----GHSVYNPSATG-KEL------------------ 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCHHHHC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc-----CCCCCCcccCC-ccc------------------
Confidence 567899999999 8999999999999999999999876422 24799999988 553
Q ss_pred CCCCCCCcceeeeCCCCeEEEEEEEEEEEEecccCCccccccCceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC---
Q 018082 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (361)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~--- 228 (361)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.||+++..++.+. .....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 ----SGYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQ--QDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TCTTCSEEEECSCGGGCCC
T ss_pred ----CCCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCcccc--cCCCCceEEEeCccccccc
Confidence 347999999999977999999999998754 45899999998765432 1246799999998642
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCcceEEecCcCC----CCceEecCCCCCCceEEEEeEEEEcCEEeecCC
Q 018082 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (361)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~~Gg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (361)
+++++|+++ | +++||+||.+ +..|.|+|||+|+ +++.|+|+.+++.+|.|.+++|+|++ ..
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~---- 204 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS---- 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE----
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc----
Confidence 589999987 6 6999999987 4689999999995 56899999766789999999999998 21
Q ss_pred cccccCCCccEEEcccccccccChHHHHHHHHHHH
Q 018082 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII 332 (361)
Q Consensus 298 ~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~ 332 (361)
.....+||||||+++++|++++++|++++.
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~ 234 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQVS 234 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTST
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhCC
Confidence 123569999999999999999999999883
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.87 E-value=4.8e-23 Score=158.55 Aligned_cols=84 Identities=39% Similarity=0.590 Sum_probs=75.1
Q ss_pred CCCceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCCCC----CCCCCCCCCCcCCccCCCCCCcceeecCCCcccCCCC
Q 018082 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (361)
Q Consensus 70 ~~~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c~----~C~~~~~~~~~~~~y~p~~Sst~~~v~c~~~~C~~~~ 145 (361)
++.+..|+++|.||||+|+|.|+|||||+++||++..|. .|.. ++.|||++|+|++..
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-------~~~y~p~~SsT~~~~----------- 70 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-------HHKYNSDKSSTYVKN----------- 70 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-------SCCBCGGGCTTCEEE-----------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-------CCCCCchhCCCceeC-----------
Confidence 456789999999999999999999999999999999986 4654 379999999999984
Q ss_pred CCCCCCCCCCCCCcceeeeCCCCeEEEEEEEEEEEEec
Q 018082 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK 183 (361)
Q Consensus 146 ~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~~~~ 183 (361)
.|.|.+.|++|+ +.|.+++|+|.|++
T Consensus 71 -----------~~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 -----------GTSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----------EEEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----------CCcEEEEECCcE-EEEEEEEEEEEECC
Confidence 378999999999 69999999999975
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.86 E-value=3.8e-21 Score=173.14 Aligned_cols=132 Identities=19% Similarity=0.274 Sum_probs=110.1
Q ss_pred CceeeeeeeeeccCCCCCCCCCCcceEeecCCCCC------cHHHHhhhcCCC-CCceEEeecCCC-C--cceEEecCcC
Q 018082 194 NGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS------SMISQLASSGGV-RKMFAHCLDGIN-G--GGIFAIGHVV 263 (361)
Q Consensus 194 ~~~~~fg~~~~~~~~~~~~~~~~~~GIlGLg~~~~------s~~~~l~~~g~i-~~~Fs~~l~~~~-~--~G~l~~Gg~d 263 (361)
++++.|||++..++.+. ....++||||||++.. +++++|++||+| +++||+||.+.. . .|+|+|||+|
T Consensus 5 v~~~~Fg~~~~~~~~~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 5 VERQVFGEATKQPGITF--IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEECCSSTT--TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred ECCeEEEEEEEccCCcc--ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 56899999998765422 3457899999999753 589999999999 699999999852 2 7999999999
Q ss_pred CC----CceEecCCCCCCceEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccChHHHHHHHHHHHhhC
Q 018082 264 QP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQ 335 (361)
Q Consensus 264 ~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i~~~i~~~~ 335 (361)
+. ++.|+|+. ++.+|.|.+++|+|+++.+. ......+|+||||+++++|++++++|.+++++..
T Consensus 83 ~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~ 150 (241)
T 1lya_B 83 SKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP 150 (241)
T ss_dssp GGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred HHHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee
Confidence 74 58899997 56899999999999987642 1235679999999999999999999999997654
No 37
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=86.52 E-value=0.85 Score=34.05 Aligned_cols=29 Identities=24% Similarity=0.221 Sum_probs=25.3
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeCCC
Q 018082 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (361)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~ 106 (361)
=++.+.|| .|.+++++|||.+++-+...+
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 36789999 999999999999999997544
No 38
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=85.33 E-value=0.85 Score=34.40 Aligned_cols=27 Identities=22% Similarity=0.179 Sum_probs=24.4
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 018082 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (361)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (361)
-++.+.|| +|.+++++|||..++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 47889999 9999999999999999973
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=85.00 E-value=0.76 Score=36.74 Aligned_cols=31 Identities=26% Similarity=0.300 Sum_probs=27.3
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (361)
..+.+++++.|+ ++++++++|||++.+.+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 456789999999 8999999999999988864
No 40
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=83.45 E-value=1.4 Score=32.77 Aligned_cols=28 Identities=29% Similarity=0.191 Sum_probs=24.8
Q ss_pred EEEEEeCCCCceEEEEEEcCCCceeEeCCC
Q 018082 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (361)
Q Consensus 77 ~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~ 106 (361)
++.+.|| +|.+++++|||.+++-+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 6789999 999999999999999996544
No 41
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=80.39 E-value=1.3 Score=35.70 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=27.7
Q ss_pred ceEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccChHHHHHH
Q 018082 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (361)
Q Consensus 278 ~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i 327 (361)
.++|+ ++|||+.+. +++|||++.+.++.+..+++
T Consensus 24 ~l~v~---~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK-------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHT
T ss_pred EEEEE---EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHc
Confidence 45544 457888775 89999999999999998876
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=80.20 E-value=1.6 Score=34.85 Aligned_cols=29 Identities=7% Similarity=0.212 Sum_probs=24.7
Q ss_pred EEEcCEEeecCCcccccCCCccEEEcccccccccChHHHHHH
Q 018082 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (361)
Q Consensus 286 i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~~i 327 (361)
+.+||+.+. +++|||++.+.++.+..+.+
T Consensus 31 v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEEE-------------EEEECCCCccccCHHHHHHc
Confidence 678988764 89999999999998887664
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=79.44 E-value=1.5 Score=35.23 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=27.3
Q ss_pred ceeEEEEEEeCCCCceEEEEEEcCCCceeEeCC
Q 018082 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (361)
Q Consensus 73 ~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~ 105 (361)
...|++++.|+ ++++++++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 44689999999 99999999999999998753
No 44
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=75.13 E-value=2.7 Score=32.25 Aligned_cols=27 Identities=26% Similarity=0.154 Sum_probs=23.7
Q ss_pred eEEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 018082 75 LYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (361)
Q Consensus 75 ~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (361)
.=++ +.|| +|.+++++|||.+++-+..
T Consensus 14 rP~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 14 PEIL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp CEEE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred CCEE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 3456 9999 9999999999999999875
No 45
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=75.02 E-value=2.6 Score=32.15 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.8
Q ss_pred EEEEEeC---CCCceEEEEEEcCCCceeEeCCCC
Q 018082 77 YAKIGIG---TPPKDYYVQVDTGSDIMWVNCIQC 107 (361)
Q Consensus 77 ~~~i~vG---tP~q~~~v~~DTGSs~~Wv~~~~c 107 (361)
.+.|.|| +|+|.+..++|||-+++-+....+
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 5566666 789999999999999999987554
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=70.60 E-value=4.3 Score=30.97 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=26.1
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeCCCC
Q 018082 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQC 107 (361)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~c 107 (361)
=.+.+.|| +|.+..++|||-+++-+...+.
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 46789999 9999999999999999976553
No 47
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=68.00 E-value=6.3 Score=30.92 Aligned_cols=33 Identities=15% Similarity=0.029 Sum_probs=27.7
Q ss_pred CceeEEEEEEeCCCCceEEEEEEcCCCceeEeCCC
Q 018082 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (361)
Q Consensus 72 ~~~~Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~~~ 106 (361)
....-++.+.|+ +|.+.+++|||.+++-+....
T Consensus 19 ~~~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 19 PPPEPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CCCSSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred ccCCCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 344568889999 999999999999999996543
No 48
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=59.95 E-value=7.2 Score=28.62 Aligned_cols=15 Identities=20% Similarity=0.709 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 018082 308 TIIDSGTTLAYLPEM 322 (361)
Q Consensus 308 aiiDTGtt~~~lp~~ 322 (361)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 30 VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEeEc
Confidence 899999999999865
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=57.21 E-value=9.1 Score=32.32 Aligned_cols=27 Identities=26% Similarity=0.196 Sum_probs=24.4
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 018082 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (361)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (361)
-.+.+.|| +|.+++++|||.+++-+..
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEec
Confidence 47889999 9999999999999999864
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=56.95 E-value=11 Score=29.26 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.9
Q ss_pred eCCCCceEEEEEEcCCCceeEeCCC
Q 018082 82 IGTPPKDYYVQVDTGSDIMWVNCIQ 106 (361)
Q Consensus 82 vGtP~q~~~v~~DTGSs~~Wv~~~~ 106 (361)
+| +|.++.++|||-+++-+...+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 66 788999999999999998644
No 51
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=46.31 E-value=12 Score=27.99 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=26.1
Q ss_pred eEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccChHHHH
Q 018082 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYE 325 (361)
Q Consensus 279 w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~~ 325 (361)
|+=.+-.++|+|+... +++|||+-.+.+......
T Consensus 6 ~~RP~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------------VLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEccccCc
Confidence 3334456889998764 999999999999976653
No 52
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=44.40 E-value=15 Score=33.25 Aligned_cols=37 Identities=27% Similarity=0.470 Sum_probs=25.3
Q ss_pred ecCCCCCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 270 TPLVPNQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
+|+......|.++ |+|| .+.+. +++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~Q~~~-------------v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGSNKQQQT-------------VIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEEE---EEETTTTEEEE-------------EEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcCCCcEEE-------------EEEeCCCCceEEecC
Confidence 4554445567655 6676 34432 899999999999854
No 53
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=44.17 E-value=13 Score=27.59 Aligned_cols=30 Identities=13% Similarity=0.416 Sum_probs=23.6
Q ss_pred eEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccCh
Q 018082 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (361)
Q Consensus 279 w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~ 321 (361)
|+=.+-.++++|+.+. +++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 4444556889998775 99999999998875
No 54
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=43.84 E-value=15 Score=33.16 Aligned_cols=37 Identities=24% Similarity=0.512 Sum_probs=24.8
Q ss_pred ecCCCCCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 270 TPLVPNQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
+|+......|.++ |+|| .+.+. +++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEGPSYAAD---IVVGSNQQKQT-------------VVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECSSSEEEE---EEETTTTEEEE-------------EEEETTCCCEEEEEE
T ss_pred EEEecCCcEEEEE---EEEcCCCcEEE-------------EEEcCCCCCEEEecC
Confidence 3444344566654 6676 44432 899999999999854
No 55
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=43.81 E-value=18 Score=32.82 Aligned_cols=37 Identities=24% Similarity=0.436 Sum_probs=24.5
Q ss_pred ecCCCCCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 270 TPLVPNQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
+|+......|.++ |+|| .+.+. ++||||++.+++|..
T Consensus 5 ~~l~n~~~~Y~~~---i~iGTP~q~~~-------------v~~DTGSs~lWv~~~ 43 (340)
T 1wkr_A 5 VPATNQLVDYVVN---VGVGSPATTYS-------------LLVDTGSSNTWLGAD 43 (340)
T ss_dssp EEEEECSSCEEEE---EEETTTTEEEE-------------EEEETTCCCCEECSS
T ss_pred EeeeccCcEEEEE---EEECCCCcEEE-------------EEEeCCChhheecCC
Confidence 4444333456654 6777 44432 999999999999863
No 56
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=43.36 E-value=15 Score=27.98 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=25.2
Q ss_pred ceEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccCh
Q 018082 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (361)
Q Consensus 278 ~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~ 321 (361)
.|+=.+- ++|+|+.+. +++|||+-.+.++.
T Consensus 11 l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 4666777 999999775 99999999998875
No 57
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=42.88 E-value=14 Score=27.35 Aligned_cols=29 Identities=7% Similarity=0.194 Sum_probs=23.3
Q ss_pred eEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccC
Q 018082 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLP 320 (361)
Q Consensus 279 w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp 320 (361)
|+-.+-.+.++|+.+. +++|||.-.+.+.
T Consensus 6 ~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 6 WKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred ccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 4445667899999875 8999999988884
No 58
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=41.55 E-value=18 Score=32.87 Aligned_cols=37 Identities=27% Similarity=0.530 Sum_probs=24.6
Q ss_pred ecCCCCCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 270 TPLVPNQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
+|+......|.++ |+|| .+.+. ++||||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 5 VTLHNEAITYTAD---ITVGSDNQKLN-------------VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEEECSSCEEEE---EEETTTTEEEE-------------EEEETTCCCEEEEEE
T ss_pred EEEecCCeEEEEE---EEECCCCcEEE-------------EEEeCCCCCeEEecC
Confidence 3444334466654 6676 44442 899999999999854
No 59
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=40.32 E-value=29 Score=31.18 Aligned_cols=40 Identities=25% Similarity=0.258 Sum_probs=27.5
Q ss_pred eEecCCCCCCceEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccChHHH
Q 018082 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (361)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~ 324 (361)
...|+. ....|.++ |+||.+.+. +++|||++.+++|..-.
T Consensus 6 ~~~~~~-~~~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 6 VTTPQN-NDEEYLTP---VTVGKSTLH-------------LDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEECT-TTSCEEEE---EEEBTEEEE-------------EEEETTCCCEEEECTTS
T ss_pred EeEEcC-CCCEEEEE---EEECCEEEE-------------EEEeCCCccceEeeCCC
Confidence 445543 44567654 677755553 89999999999987543
No 60
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=39.76 E-value=25 Score=27.48 Aligned_cols=27 Identities=19% Similarity=0.314 Sum_probs=22.0
Q ss_pred eEEEEcCEEeecCCcccccCCCccEEEcccccccccChHH
Q 018082 284 TAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMV 323 (361)
Q Consensus 284 ~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~ 323 (361)
-.++|+|+.+. +++|||...+.++...
T Consensus 25 v~i~I~G~~~~-------------~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 25 ITLKVGGQPVT-------------FLVDTGAQHSVLTQNP 51 (132)
T ss_dssp EEEEETTEEEE-------------EEECTTCSSCEECSCC
T ss_pred EEEEECCEEEE-------------EEEeCCCCeEEEcccc
Confidence 44888998764 8999999999998643
No 61
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=37.71 E-value=22 Score=32.12 Aligned_cols=15 Identities=27% Similarity=0.789 Sum_probs=13.5
Q ss_pred EEEcccccccccChH
Q 018082 308 TIIDSGTTLAYLPEM 322 (361)
Q Consensus 308 aiiDTGtt~~~lp~~ 322 (361)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 29 VIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEECCCcceEEEcC
Confidence 899999999999854
No 62
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=35.91 E-value=41 Score=28.29 Aligned_cols=27 Identities=26% Similarity=0.196 Sum_probs=24.3
Q ss_pred EEEEEEeCCCCceEEEEEEcCCCceeEeC
Q 018082 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (361)
Q Consensus 76 Y~~~i~vGtP~q~~~v~~DTGSs~~Wv~~ 104 (361)
-.+++.+| +|.++.++|||.+++-+..
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 47889999 8999999999999999854
No 63
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=34.25 E-value=29 Score=31.14 Aligned_cols=40 Identities=25% Similarity=0.336 Sum_probs=27.5
Q ss_pred ceEecCCCCCCceEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccChHH
Q 018082 267 VNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMV 323 (361)
Q Consensus 267 ~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~ 323 (361)
+...|+. ....|.++ |+||.+.+. +++|||++.+++|..-
T Consensus 6 v~~~~~~-~~~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 6 ATNTPTA-NDEEYITP---VTIGGTTLN-------------LNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEECG-GGSCEEEE---EEETTEEEE-------------EEEETTCCCEEECBTT
T ss_pred eeeeecC-CCCEEEEE---EEECCEEEE-------------EEEeCCCcceEEecCC
Confidence 3445543 34556654 777755553 8999999999999764
No 64
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=34.00 E-value=43 Score=30.05 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=23.7
Q ss_pred CCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChHH
Q 018082 275 NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMV 323 (361)
Q Consensus 275 ~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~ 323 (361)
....|.+ .|+|| .+.+. ++||||++.+++|..-
T Consensus 13 ~~~~Y~~---~i~iGTP~Q~~~-------------v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 13 ADSEYIT---SVSIGTPAQVLP-------------LDFDTGSSDLWVFSSE 47 (329)
T ss_dssp TCCCEEE---EEEETTTTEEEE-------------EEEETTCCCEEECBTT
T ss_pred CCCEEEE---EEEECCCCeEEE-------------EEEcCCCCCeEEecCC
Confidence 3455665 47777 44443 8999999999999754
No 65
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=33.65 E-value=33 Score=31.23 Aligned_cols=41 Identities=22% Similarity=0.427 Sum_probs=27.6
Q ss_pred CceEecCCC-CCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 266 EVNKTPLVP-NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 266 ~~~~~p~~~-~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
.....|+.. ....|.+. |+|| .+.+. ++||||++.+++|..
T Consensus 6 ~~~~~~l~~~~~~~Y~~~---i~iGtP~q~~~-------------v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIP---VSIGTPGQDFY-------------LLFDTGSSDTWVPHK 49 (361)
T ss_dssp CEEEEEEEETTTTEEEEE---EEETTTTEEEE-------------EEEETTCCCCEEEBT
T ss_pred ccceEEeecCCCCEEEEE---EEECCCCcEEE-------------EEEcCCCCCeEECCC
Confidence 345567653 23456654 6777 44443 899999999999875
No 66
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=33.46 E-value=37 Score=28.96 Aligned_cols=31 Identities=13% Similarity=0.097 Sum_probs=22.8
Q ss_pred eeEEEE---EEeCC-----CCceEEEEEEcCCCceeEeC
Q 018082 74 GLYYAK---IGIGT-----PPKDYYVQVDTGSDIMWVNC 104 (361)
Q Consensus 74 ~~Y~~~---i~vGt-----P~q~~~v~~DTGSs~~Wv~~ 104 (361)
++|.++ |.||. +.....++||||++.+++|.
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~ 226 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPT 226 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCH
Confidence 356554 67775 23457899999999999975
No 67
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=32.89 E-value=31 Score=30.93 Aligned_cols=40 Identities=25% Similarity=0.306 Sum_probs=27.4
Q ss_pred eEecCCCCCCceEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccChHHH
Q 018082 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (361)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~~~ 324 (361)
...|+. ....|.++ |+||.+.+. ++||||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~~---i~iG~q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 7 TTNPTS-NDEEYITQ---VTVGDDTLG-------------LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEECG-GGCCEEEE---EEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeEcC-CCCEEEEE---EEECCEEEE-------------EEEcCCCcceEEecCCC
Confidence 445543 34556654 777755543 89999999999997643
No 68
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=32.37 E-value=47 Score=29.76 Aligned_cols=32 Identities=25% Similarity=0.320 Sum_probs=23.4
Q ss_pred CCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 275 NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 275 ~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
....|.+ .|+|| .+.+. ++||||++.+++|..
T Consensus 13 ~~~~Y~~---~i~iGTP~Q~~~-------------v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 13 LDDAYIT---PVQIGTPAQTLN-------------LDFDTGSSDLWVFSS 46 (329)
T ss_dssp TCCCEEE---EEEETTTTEEEE-------------EEEETTCCCEEECBT
T ss_pred CCCEEEE---EEEECCCCeEEE-------------EEECCCCCCeEEecC
Confidence 4456665 47777 44443 899999999999975
No 69
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=31.85 E-value=40 Score=30.16 Aligned_cols=15 Identities=20% Similarity=0.656 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 018082 308 TIIDSGTTLAYLPEM 322 (361)
Q Consensus 308 aiiDTGtt~~~lp~~ 322 (361)
+++|||++.+++|..
T Consensus 31 v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 31 VLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCccceEEcCC
Confidence 899999999999875
No 70
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=30.83 E-value=31 Score=31.04 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=22.7
Q ss_pred CceEEEEeEEEEcCEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 277 ~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
..|.++ |+||.+.+. +++|||++.+++|..
T Consensus 17 ~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQNFL-------------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEEEE-------------EEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEEEE-------------EEEeCCCcceEEecC
Confidence 456654 777755553 899999999999864
No 71
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=29.81 E-value=41 Score=30.13 Aligned_cols=15 Identities=20% Similarity=0.682 Sum_probs=13.9
Q ss_pred EEEcccccccccChH
Q 018082 308 TIIDSGTTLAYLPEM 322 (361)
Q Consensus 308 aiiDTGtt~~~lp~~ 322 (361)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~lWv~~~ 43 (329)
T 1htr_B 29 VLFDTGSSNLWVPSV 43 (329)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEcCCCccEEEecC
Confidence 899999999999875
No 72
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=25.88 E-value=59 Score=27.49 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=23.3
Q ss_pred eeEEE---EEEeCCC----CceEEEEEEcCCCceeEeCC
Q 018082 74 GLYYA---KIGIGTP----PKDYYVQVDTGSDIMWVNCI 105 (361)
Q Consensus 74 ~~Y~~---~i~vGtP----~q~~~v~~DTGSs~~Wv~~~ 105 (361)
.+|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 34544 5678752 34578999999999999864
No 73
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=24.59 E-value=48 Score=29.68 Aligned_cols=32 Identities=22% Similarity=0.310 Sum_probs=23.1
Q ss_pred CCCceEEEEeEEEEc--CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 275 NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 275 ~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
....|.++ |+|| .+.+. +++|||++.+++|..
T Consensus 13 ~~~~Y~~~---i~iGTP~q~~~-------------v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 13 NDIEYYGQ---VTIGTPGKKFN-------------LDFDTGSSDLWIAST 46 (325)
T ss_dssp TTTEEEEE---EEETTTTEEEE-------------EEEETTCCCCEEEBT
T ss_pred CCCEEEEE---EEECCCCeEEE-------------EEEcCCCCCEEEccC
Confidence 34556654 6777 44443 899999999999865
No 74
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=23.65 E-value=69 Score=24.23 Aligned_cols=26 Identities=8% Similarity=0.222 Sum_probs=21.1
Q ss_pred EeEEEEcCEEeecCCcccccCCCccEEEcccccccccCh
Q 018082 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (361)
Q Consensus 283 l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~ 321 (361)
+-.+.++|+.+. +++|||.-.+.+..
T Consensus 11 ~vti~I~Gq~~e-------------aLLDTGADdTVi~~ 36 (114)
T 3sqf_A 11 SLTLWLDDKMFT-------------GLINTGADVTIIKL 36 (114)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred eEEEEECCEEEE-------------EEEccCCCceEEec
Confidence 445888888775 99999999988864
No 75
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=21.89 E-value=57 Score=29.14 Aligned_cols=15 Identities=27% Similarity=0.665 Sum_probs=13.8
Q ss_pred EEEcccccccccChH
Q 018082 308 TIIDSGTTLAYLPEM 322 (361)
Q Consensus 308 aiiDTGtt~~~lp~~ 322 (361)
+++|||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 30 VILDTGSSNLWVPSN 44 (329)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcCeEEecC
Confidence 899999999999865
No 76
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=21.10 E-value=49 Score=25.07 Aligned_cols=28 Identities=18% Similarity=0.413 Sum_probs=20.8
Q ss_pred EEeEEEEc-----CEEeecCCcccccCCCccEEEcccccccccChH
Q 018082 282 NMTAVQVG-----LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (361)
Q Consensus 282 ~l~~i~v~-----g~~~~~~~~~~~~~~~~~aiiDTGtt~~~lp~~ 322 (361)
.+-.|+++ |+.+. +++|||.-.+.++..
T Consensus 11 PlvtikI~~~~~~Gq~~e-------------aLLDTGADdTVl~~~ 43 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIE-------------ALLDTGADMTVIPIA 43 (116)
T ss_dssp CEEEEEEECSSSCCEEEE-------------EEECTTBSSCEEEGG
T ss_pred CeEEEEEccccCCCeEeE-------------EEeccCCCccEEecc
Confidence 44557777 66553 999999999998753
No 77
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=20.24 E-value=63 Score=29.73 Aligned_cols=15 Identities=13% Similarity=0.293 Sum_probs=13.7
Q ss_pred EEEcccccccccChH
Q 018082 308 TIIDSGTTLAYLPEM 322 (361)
Q Consensus 308 aiiDTGtt~~~lp~~ 322 (361)
++||||++.+++|..
T Consensus 38 v~~DTGSs~lWv~~~ 52 (395)
T 2qp8_A 38 ILVDTGSSNFAVGAA 52 (395)
T ss_dssp EEEETTCCCEEEECS
T ss_pred EEEecCCCceEEECC
Confidence 899999999999864
Done!