Your job contains 1 sequence.
>018085
MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYF
KRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQAD
AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP
TRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSS
LDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPP
PRRKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPMIE
S
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018085
(361 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2032288 - symbol:CSN5B "COP9-signalosome 5B" s... 1530 5.5e-157 1
TAIR|locus:2017764 - symbol:CSN5A "COP9 signalosome 5A" s... 1526 1.4e-156 1
ZFIN|ZDB-GENE-040426-1686 - symbol:cops5 "COP9 constituti... 1200 5.1e-122 1
UNIPROTKB|Q5ZLC3 - symbol:COPS5 "Uncharacterized protein"... 1196 1.3e-121 1
UNIPROTKB|E2QWE0 - symbol:COPS5 "Uncharacterized protein"... 1196 1.3e-121 1
UNIPROTKB|F1MBP8 - symbol:COPS5 "Uncharacterized protein"... 1195 1.7e-121 1
UNIPROTKB|Q92905 - symbol:COPS5 "COP9 signalosome complex... 1195 1.7e-121 1
UNIPROTKB|F2Z540 - symbol:COPS5 "Uncharacterized protein"... 1195 1.7e-121 1
MGI|MGI:1349415 - symbol:Cops5 "COP9 (constitutive photom... 1194 2.2e-121 1
RGD|1310301 - symbol:Cops5 "COP9 signalosome subunit 5" s... 1194 2.2e-121 1
DICTYBASE|DDB_G0284597 - symbol:csn5 "Mov34/MPN/PAD-1 fam... 1186 1.5e-120 1
FB|FBgn0027053 - symbol:CSN5 "COP9 complex homolog subuni... 1152 6.2e-117 1
WB|WBGene00000817 - symbol:csn-5 species:6239 "Caenorhabd... 966 4.7e-99 2
UNIPROTKB|P91001 - symbol:csn-5 "COP9 signalosome complex... 966 4.7e-99 2
UNIPROTKB|G4N5N6 - symbol:MGG_05274 "COP9 signalosome com... 933 1.0e-93 1
ASPGD|ASPL0000041877 - symbol:csnE species:162425 "Emeric... 907 5.7e-91 1
UNIPROTKB|E5RHF2 - symbol:COPS5 "COP9 signalosome complex... 685 1.9e-67 1
POMBASE|SPAC1687.13c - symbol:csn5 "COP9/signalosome comp... 618 2.4e-60 1
DICTYBASE|DDB_G0272566 - symbol:psmD14 "putative multidru... 369 5.8e-34 1
SGD|S000002375 - symbol:RRI1 "Catalytic subunit of the CO... 369 5.8e-34 1
UNIPROTKB|Q17QP9 - symbol:PSMD14 "Proteasome (Prosome, ma... 346 1.6e-31 1
UNIPROTKB|O00487 - symbol:PSMD14 "26S proteasome non-ATPa... 346 1.6e-31 1
UNIPROTKB|F1RPQ3 - symbol:PSMD14 "Uncharacterized protein... 346 1.6e-31 1
MGI|MGI:1913284 - symbol:Psmd14 "proteasome (prosome, mac... 346 1.6e-31 1
RGD|1594532 - symbol:Psmd14 "proteasome (prosome, macropa... 346 1.6e-31 1
UNIPROTKB|F1LMW6 - symbol:Psmd14 "Protein Psmd14" species... 346 1.6e-31 1
TAIR|locus:2171696 - symbol:AT5G23540 "AT5G23540" species... 346 1.6e-31 1
CGD|CAL0003932 - symbol:orf19.7264 species:5476 "Candida ... 345 2.0e-31 1
FB|FBgn0028694 - symbol:Rpn11 "Regulatory particle non-AT... 345 2.0e-31 1
UNIPROTKB|E1C6N0 - symbol:PSMD14 "Uncharacterized protein... 341 5.4e-31 1
ZFIN|ZDB-GENE-070410-56 - symbol:psmd14 "proteasome (pros... 341 5.4e-31 1
SGD|S000001900 - symbol:RPN11 "Metalloprotease subunit of... 336 1.8e-30 1
ASPGD|ASPL0000076795 - symbol:AN4492 species:162425 "Emer... 335 2.3e-30 1
WB|WBGene00004467 - symbol:rpn-11 species:6239 "Caenorhab... 335 2.3e-30 1
UNIPROTKB|O76577 - symbol:rpn-11 "26S proteasome non-ATPa... 335 2.3e-30 1
WB|WBGene00018135 - symbol:F37A4.5 species:6239 "Caenorha... 334 3.0e-30 1
POMBASE|SPAC31G5.13 - symbol:rpn11 "19S proteasome regula... 331 6.2e-30 1
GENEDB_PFALCIPARUM|MAL13P1.343 - symbol:MAL13P1.343 "prot... 325 2.7e-29 1
UNIPROTKB|Q8ID28 - symbol:MAL13P1.343 "Proteasome regulat... 325 2.7e-29 1
UNIPROTKB|C9JW37 - symbol:PSMD14 "26S proteasome non-ATPa... 122 5.1e-07 1
UNIPROTKB|B6MUN4 - symbol:MYSM1 "Histone H2A deubiquitina... 142 2.1e-06 1
UNIPROTKB|Q5ZLE6 - symbol:EIF3H "Eukaryotic translation i... 136 2.5e-06 1
UNIPROTKB|Q4VA72 - symbol:brcc3 "Lys-63-specific deubiqui... 129 7.6e-06 1
UNIPROTKB|B5RI54 - symbol:eif3h "Eukaryotic translation i... 131 8.8e-06 1
UNIPROTKB|B5FY35 - symbol:EIF3H "Eukaryotic translation i... 131 9.0e-06 1
UNIPROTKB|B5X8M4 - symbol:brcc3 "Lys-63-specific deubiqui... 128 9.7e-06 1
UNIPROTKB|O15372 - symbol:EIF3H "Eukaryotic translation i... 129 1.6e-05 1
UNIPROTKB|B3KS98 - symbol:EIF3S3 "Eukaryotic translation ... 129 1.7e-05 1
UNIPROTKB|Q66GV6 - symbol:brcc3 "Lys-63-specific deubiqui... 125 2.2e-05 1
UNIPROTKB|Q5PPY6 - symbol:eif3h "Eukaryotic translation i... 127 2.3e-05 1
TAIR|locus:2016279 - symbol:BRCC36A "AT1G80210" species:3... 128 2.6e-05 1
UNIPROTKB|Q56JZ5 - symbol:EIF3H "Eukaryotic translation i... 126 3.4e-05 1
MGI|MGI:1915385 - symbol:Eif3h "eukaryotic translation in... 126 3.4e-05 1
RGD|735178 - symbol:Eif3h "eukaryotic translation initiat... 126 3.4e-05 1
TAIR|locus:2083318 - symbol:BRCC36B "AT3G06820" species:3... 124 7.3e-05 1
UNIPROTKB|Q6P381 - symbol:eif3h "Eukaryotic translation i... 121 0.00011 1
ZFIN|ZDB-GENE-040808-19 - symbol:eif3ha "eukaryotic trans... 121 0.00011 1
UNIPROTKB|Q5VVJ2 - symbol:MYSM1 "Histone H2A deubiquitina... 114 0.00012 2
ZFIN|ZDB-GENE-051030-42 - symbol:eif3hb "eukaryotic trans... 120 0.00014 1
UNIPROTKB|G4NCJ9 - symbol:MGG_01059 "26S proteasome regul... 117 0.00035 1
POMBASE|SPCC1682.10 - symbol:rpn8 "19S proteasome regulat... 116 0.00038 1
UNIPROTKB|A0JMR6 - symbol:mysm1 "Histone H2A deubiquitina... 121 0.00043 1
DICTYBASE|DDB_G0277927 - symbol:mybH "SWIRM domain-contai... 122 0.00053 1
UNIPROTKB|F1NJR7 - symbol:MYSM1 "Histone H2A deubiquitina... 120 0.00056 1
UNIPROTKB|F1NCM9 - symbol:MYSM1 "Histone H2A deubiquitina... 120 0.00056 1
UNIPROTKB|Q5F3F2 - symbol:MYSM1 "Histone H2A deubiquitina... 120 0.00056 1
UNIPROTKB|Q5R9L6 - symbol:BRCC3 "Lys-63-specific deubiqui... 103 0.00057 2
RGD|1588543 - symbol:Brcc3 "BRCA1/BRCA2-containing comple... 103 0.00070 3
MGI|MGI:2444584 - symbol:Mysm1 "myb-like, SWIRM and MPN d... 119 0.00071 1
UNIPROTKB|E1B741 - symbol:MYSM1 "Uncharacterized protein"... 119 0.00072 1
>TAIR|locus:2032288 [details] [associations]
symbol:CSN5B "COP9-signalosome 5B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0000338 "protein
deneddylation" evidence=IGI] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010387 "signalosome assembly" evidence=IMP]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:2000082 "regulation of L-ascorbic acid
biosynthetic process" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0008180
eggNOG:COG1310 GO:GO:0000338 EMBL:AF087412 EMBL:AF395061
EMBL:AC016162 EMBL:AF411778 EMBL:AY124816 IPI:IPI00526805
PIR:H96736 PIR:T52042 RefSeq:NP_177279.1 UniGene:At.17922
UniGene:At.68950 ProteinModelPortal:Q9FVU9 IntAct:Q9FVU9
STRING:Q9FVU9 MEROPS:M67.A02 PRIDE:Q9FVU9 EnsemblPlants:AT1G71230.1
GeneID:843463 KEGG:ath:AT1G71230 TAIR:At1g71230
HOGENOM:HOG000116528 InParanoid:Q9FVU9 KO:K09613 OMA:SAGKVCL
PhylomeDB:Q9FVU9 ProtClustDB:CLSN2681857 Genevestigator:Q9FVU9
GermOnline:AT1G71230 GO:GO:0010100 GO:GO:0010387 Uniprot:Q9FVU9
Length = 358
Score = 1530 (543.6 bits), Expect = 5.5e-157, P = 5.5e-157
Identities = 292/358 (81%), Positives = 322/358 (89%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S+IA+KTWELEN+I+++++P S SD IF+YD+ +QT+FQQEKPW NDPHYFKR
Sbjct: 6 STIARKTWELENSILTVDSPD-------STSDNIFYYDDTSQTRFQQEKPWENDPHYFKR 58
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
VKISALALLKMVVHARSGGTIE+MGLMQGKTDGD IIVMDAFALPVEGTETRVNAQ DAY
Sbjct: 59 VKISALALLKMVVHARSGGTIEIMGLMQGKTDGDTIIVMDAFALPVEGTETRVNAQDDAY 118
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYMV+YSQTNK AGRLEN VGWYHSHPGYGCWLSGIDVSTQ LNQQ QEPFLAVVIDPTR
Sbjct: 119 EYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTR 178
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
TVSAGKVEIGAFRTY +GYKPPDEP+SEYQTIPLNKIEDFGVHCKQYYSLD+TYFKSSLD
Sbjct: 179 TVSAGKVEIGAFRTYSKGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYSLDVTYFKSSLD 238
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+ L SR+G ++
Sbjct: 239 SHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESHLVQSRFGGVVPSSLH 298
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQST-KTHAEPSDPEPMI 359
+K++++SQL KITRDSAKITVEQVHGLMSQVIKD LFNS+RQS K+ + SDP+PMI
Sbjct: 299 KKKEDESQLTKITRDSAKITVEQVHGLMSQVIKDELFNSMRQSNNKSPTDSSDPDPMI 356
>TAIR|locus:2017764 [details] [associations]
symbol:CSN5A "COP9 signalosome 5A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000338 "protein deneddylation"
evidence=TAS] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0009733 "response to auxin stimulus"
evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0010387 "signalosome
assembly" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0031347
"regulation of defense response" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0010093
GO:GO:0008180 eggNOG:COG1310 GO:GO:0031347 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 ProtClustDB:CLSN2681857
GO:GO:0010100 GO:GO:0010387 EMBL:AF087413 EMBL:AF395062
EMBL:AF042334 EMBL:AF000657 EMBL:AY087510 EMBL:BT003909
IPI:IPI00517251 PIR:C86363 PIR:T52180 RefSeq:NP_173705.1
UniGene:At.10441 ProteinModelPortal:Q8LAZ7 IntAct:Q8LAZ7
STRING:Q8LAZ7 MEROPS:M67.A01 PaxDb:Q8LAZ7 PRIDE:Q8LAZ7
EnsemblPlants:AT1G22920.1 GeneID:838899 KEGG:ath:AT1G22920
GeneFarm:4559 TAIR:At1g22920 InParanoid:Q8LAZ7 OMA:IFHYDDA
PhylomeDB:Q8LAZ7 Genevestigator:Q8LAZ7 Uniprot:Q8LAZ7
Length = 357
Score = 1526 (542.2 bits), Expect = 1.4e-156, P = 1.4e-156
Identities = 294/359 (81%), Positives = 325/359 (90%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S+IA+KTWELENNI+ +E PT+S ASD+IF YD+ +Q K QQEKPW +DP+YFKR
Sbjct: 6 SAIARKTWELENNILPVE--PTDS-----ASDSIFHYDDASQAKIQQEKPWASDPNYFKR 58
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
V ISALALLKMVVHARSGGTIE+MGLMQGKT+GD IIVMDAFALPVEGTETRVNAQ+DAY
Sbjct: 59 VHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAY 118
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYMV+YSQT+K AGRLEN VGWYHSHPGYGCWLSGIDVSTQMLNQQ+QEPFLAVVIDPTR
Sbjct: 119 EYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTR 178
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
TVSAGKVEIGAFRTYPEG+K D+ +SEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD
Sbjct: 179 TVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 238
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAE+QL++SRYG + +
Sbjct: 239 SHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQ 298
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTKTHAEPSDPEPMIES 361
R+++++ QLAKITRDSAKITVEQVHGLMSQVIKDILFNS RQS K+ + SDPEPMI S
Sbjct: 299 RRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS 357
>ZFIN|ZDB-GENE-040426-1686 [details] [associations]
symbol:cops5 "COP9 constitutive photomorphogenic
homolog subunit 5" species:7955 "Danio rerio" [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040426-1686 GO:GO:0048471 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0008180 eggNOG:COG1310 HOGENOM:HOG000116528
KO:K09613 OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
EMBL:BC059493 IPI:IPI00500950 RefSeq:NP_957019.1 UniGene:Dr.81074
ProteinModelPortal:Q6PC30 STRING:Q6PC30 PRIDE:Q6PC30
Ensembl:ENSDART00000080332 GeneID:393698 KEGG:dre:393698 CTD:10987
HOVERGEN:HBG051137 InParanoid:Q6PC30 OrthoDB:EOG41NTMD
NextBio:20814701 Bgee:Q6PC30 Uniprot:Q6PC30
Length = 334
Score = 1200 (427.5 bits), Expect = 5.1e-122, P = 5.1e-122
Identities = 234/343 (68%), Positives = 268/343 (78%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
SSIA KTWEL N SM+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 4 SSIAMKTWELSN---SMQ--------EVQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 52
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
K+SALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 53 CKLSALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 112
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 113 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 172
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 173 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 232
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQAE QL + ++
Sbjct: 233 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQAEAQLGRGSF--MLGLDTH 290
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 345
++ ED +LAK TRDS K T+E +HGLMSQVIKD LFN V S
Sbjct: 291 DRKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQVNTS 332
>UNIPROTKB|Q5ZLC3 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528
KO:K09613 OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
CTD:10987 HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:AADN02048438
EMBL:AADN02048434 EMBL:AADN02048433 EMBL:AADN02048414
EMBL:AADN02048415 EMBL:AADN02048416 EMBL:AADN02048417
EMBL:AADN02048432 EMBL:AADN02048427 EMBL:AADN02048399
EMBL:AADN02048400 EMBL:AADN02048401 EMBL:AADN02048402
EMBL:AADN02048403 EMBL:AADN02048404 EMBL:AADN02048405
EMBL:AADN02048406 EMBL:AADN02048407 EMBL:AADN02048408
EMBL:AADN02048409 EMBL:AADN02048410 EMBL:AADN02048411
EMBL:AADN02048412 EMBL:AADN02048413 EMBL:AADN02048418
EMBL:AADN02048419 EMBL:AADN02048420 EMBL:AADN02048421
EMBL:AADN02048422 EMBL:AADN02048423 EMBL:AADN02048424
EMBL:AADN02048425 EMBL:AADN02048426 EMBL:AADN02048428
EMBL:AADN02048429 EMBL:AADN02048430 EMBL:AADN02048431
EMBL:AADN02048435 EMBL:AADN02048436 EMBL:AADN02048437
EMBL:AADN02048439 EMBL:AADN02048440 EMBL:AADN02064737 EMBL:AJ719811
IPI:IPI00571765 RefSeq:NP_001034400.1 UniGene:Gga.49592
STRING:Q5ZLC3 Ensembl:ENSGALT00000023424 GeneID:426579
KEGG:gga:426579 InParanoid:Q5ZLC3 NextBio:20828097 Uniprot:Q5ZLC3
Length = 338
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 231/340 (67%), Positives = 265/340 (77%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD Q + KPW D HYFK
Sbjct: 10 SGMAQKTWELANNM-----------QEAQSIDEIYKYDRKQQQEILAAKPWTKDHHYFKY 58
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 59 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 118
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 119 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 178
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 179 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 238
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++
Sbjct: 239 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETH 296
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 342
K+ ED +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct: 297 DKKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 335
>UNIPROTKB|E2QWE0 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0045944 GO:GO:0008237
GO:GO:0051726 GO:GO:0046328 GO:GO:0008180 GO:GO:0010388 KO:K09613
OMA:SAGKVCL GeneTree:ENSGT00550000074850 CTD:10987
EMBL:AAEX03015841 RefSeq:XP_535093.1 Ensembl:ENSCAFT00000011845
GeneID:477901 KEGG:cfa:477901 NextBio:20853308 Uniprot:E2QWE0
Length = 334
Score = 1196 (426.1 bits), Expect = 1.3e-121, P = 1.3e-121
Identities = 231/343 (67%), Positives = 267/343 (77%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETH 292
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 345
++ ED +LAK TRDS K T+E +HGLMSQVIKD LFN + S
Sbjct: 293 DRKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINVS 334
>UNIPROTKB|F1MBP8 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 KO:K09613 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 CTD:10987 EMBL:DAAA02038695
IPI:IPI00700780 RefSeq:NP_001179068.1 UniGene:Bt.9730
ProteinModelPortal:F1MBP8 Ensembl:ENSBTAT00000003609 GeneID:507179
KEGG:bta:507179 NextBio:20867939 Uniprot:F1MBP8
Length = 334
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 231/343 (67%), Positives = 267/343 (77%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSVDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETH 292
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 345
++ ED +LAK TRDS K T+E +HGLMSQVIKD LFN + S
Sbjct: 293 DRKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS 334
>UNIPROTKB|Q92905 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000338 "protein
deneddylation" evidence=IMP] [GO:0008237 "metallopeptidase
activity" evidence=IMP] [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0046328
"regulation of JNK cascade" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=TAS] [GO:0003743 "translation initiation factor activity"
evidence=TAS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0048471 GO:GO:0046872
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0045944 GO:GO:0006508
GO:GO:0008237 GO:GO:0051726 GO:GO:0003713 GO:GO:0006366
GO:GO:0003743 GO:GO:0046328 GO:GO:0008180 eggNOG:COG1310
Pathway_Interaction_DB:hif1apathway GO:GO:0005852 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD ChiTaRS:COPS5 EMBL:U65928
EMBL:U70734 EMBL:CR541678 EMBL:BC001187 EMBL:BC001859 EMBL:BC007272
EMBL:BX648542 EMBL:AY078082 IPI:IPI00009958 PIR:S71820
RefSeq:NP_006828.2 UniGene:Hs.491912 ProteinModelPortal:Q92905
DIP:DIP-34546N IntAct:Q92905 MINT:MINT-1188008 STRING:Q92905
PhosphoSite:Q92905 DMDM:55976562 REPRODUCTION-2DPAGE:IPI00009958
PaxDb:Q92905 PRIDE:Q92905 DNASU:10987 Ensembl:ENST00000357849
GeneID:10987 KEGG:hsa:10987 UCSC:uc003xxd.3 GeneCards:GC08M068005
HGNC:HGNC:2240 HPA:CAB004242 HPA:HPA004845 MIM:604850
neXtProt:NX_Q92905 PharmGKB:PA26757 InParanoid:Q92905
GenomeRNAi:10987 NextBio:41743 ArrayExpress:Q92905 Bgee:Q92905
CleanEx:HS_COPS5 Genevestigator:Q92905 GermOnline:ENSG00000121022
Uniprot:Q92905
Length = 334
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 231/343 (67%), Positives = 267/343 (77%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETH 292
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 345
++ ED +LAK TRDS K T+E +HGLMSQVIKD LFN + S
Sbjct: 293 DRKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS 334
>UNIPROTKB|F2Z540 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 EMBL:CU582915 EMBL:JX570667
Ensembl:ENSSSCT00000006798 Uniprot:F2Z540
Length = 334
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 231/343 (67%), Positives = 267/343 (77%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETH 292
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQS 345
++ ED +LAK TRDS K T+E +HGLMSQVIKD LFN + S
Sbjct: 293 DRKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQINIS 334
>MGI|MGI:1349415 [details] [associations]
symbol:Cops5 "COP9 (constitutive photomorphogenic) homolog,
subunit 5 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000338 "protein deneddylation" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO] [GO:0010388
"cullin deneddylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046328 "regulation of JNK cascade" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1349415 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0045944 GO:GO:0006508 GO:GO:0008237 GO:GO:0005667
GO:GO:0051726 GO:GO:0003713 GO:GO:0046328 GO:GO:0008180
eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:U70736 EMBL:AF068223
EMBL:AF065386 EMBL:AK012499 EMBL:AK146271 EMBL:AK151492
EMBL:BC046753 IPI:IPI00135087 RefSeq:NP_038743.1 UniGene:Mm.402384
ProteinModelPortal:O35864 STRING:O35864 PhosphoSite:O35864
REPRODUCTION-2DPAGE:O35864 PaxDb:O35864 PRIDE:O35864
Ensembl:ENSMUST00000027050 GeneID:26754 KEGG:mmu:26754
UCSC:uc007ahe.1 InParanoid:O35864 NextBio:304667 Bgee:O35864
Genevestigator:O35864 GermOnline:ENSMUSG00000025917 Uniprot:O35864
Length = 334
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 230/340 (67%), Positives = 266/340 (78%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETH 292
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 342
++ ED +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct: 293 DRKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>RGD|1310301 [details] [associations]
symbol:Cops5 "COP9 signalosome subunit 5" species:10116 "Rattus
norvegicus" [GO:0000338 "protein deneddylation" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008237 "metallopeptidase activity" evidence=IEA;ISO]
[GO:0010388 "cullin deneddylation" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0046328 "regulation of JNK cascade"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1310301
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 EMBL:CH473984 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002
GeneTree:ENSGT00550000074850 CTD:10987 HOVERGEN:HBG051137
OrthoDB:EOG41NTMD EMBL:BC098736 IPI:IPI00366535
RefSeq:NP_001020866.1 UniGene:Rn.2243 STRING:Q4KM69
Ensembl:ENSRNOT00000008877 GeneID:312916 KEGG:rno:312916
UCSC:RGD:1310301 InParanoid:Q4KM69 NextBio:665375
Genevestigator:Q4KM69 Uniprot:Q4KM69
Length = 334
Score = 1194 (425.4 bits), Expect = 2.2e-121, P = 2.2e-121
Identities = 230/340 (67%), Positives = 266/340 (78%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
S +AQKTWEL NN+ + + D I+ YD+ Q + KPW D HYFK
Sbjct: 6 SGMAQKTWELANNM-----------QEAQSIDEIYKYDKKQQQEILAAKPWTKDHHYFKY 54
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
KISALALLKMV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AY
Sbjct: 55 CKISALALLKMVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAY 114
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM Y + KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTR
Sbjct: 115 EYMAAYIENAKQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTR 174
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV +GAFRTYP+GYKPPDE SEYQTIPLNKIEDFGVHCKQYY+L+++YFKSSLD
Sbjct: 175 TISAGKVNLGAFRTYPKGYKPPDEGPSEYQTIPLNKIEDFGVHCKQYYALEVSYFKSSLD 234
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
LL+LLWNKYWVNTLSSS LL N DY GQ+ DL+EKLEQ+E QL + ++
Sbjct: 235 RKLLELLWNKYWVNTLSSSSLLTNADYTTGQVFDLSEKLEQSEAQLGRGSF--MLGLETH 292
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 342
++ ED +LAK TRDS K T+E +HGLMSQVIKD LFN +
Sbjct: 293 DRKSED-KLAKATRDSCKTTIEAIHGLMSQVIKDKLFNQI 331
>DICTYBASE|DDB_G0284597 [details] [associations]
symbol:csn5 "Mov34/MPN/PAD-1 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0284597 GO:GO:0005737
GenomeReviews:CM000153_GR GO:GO:0046872 GO:GO:0008283 GO:GO:0006508
GO:GO:0008237 GO:GO:0008180 eggNOG:COG1310 EMBL:AAFI02000069
KO:K09613 OMA:SAGKVCL EMBL:DQ309433 RefSeq:XP_638491.1
ProteinModelPortal:Q54PF3 STRING:Q54PF3 MEROPS:M67.A13 PRIDE:Q54PF3
EnsemblProtists:DDB0233103 GeneID:8624671 KEGG:ddi:DDB_G0284597
ProtClustDB:CLSZ2497175 Uniprot:Q54PF3
Length = 332
Score = 1186 (422.6 bits), Expect = 1.5e-120, P = 1.5e-120
Identities = 229/342 (66%), Positives = 273/342 (79%)
Query: 6 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKI 65
A KT+ELENNI T D D +F YD +F Q KPW DPHYFK VKI
Sbjct: 9 ALKTFELENNI---------QTID---HDQLFKYDPQQYQQFLQSKPWSKDPHYFKHVKI 56
Query: 66 SALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYM 125
SA+ALLKMV+HARSGG +EVMG++ GK + + +I+MD+FALPVEGTETRVNAQ +AYEYM
Sbjct: 57 SAIALLKMVMHARSGGKLEVMGMLMGKVENNTMIIMDSFALPVEGTETRVNAQVEAYEYM 116
Query: 126 VDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVS 185
V+Y + KQ GRLENA+GWYHSHPGYGCWLSGIDV TQ +NQQ+ EP+L +VIDPTRTVS
Sbjct: 117 VEYLELIKQTGRLENALGWYHSHPGYGCWLSGIDVGTQSVNQQYSEPWLGIVIDPTRTVS 176
Query: 186 AGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHL 245
AGKVEIGAFRTYP+GYKPP+E SEYQ+IPL+KIEDFGVHCKQYYSL+ITYFKSSLD L
Sbjct: 177 AGKVEIGAFRTYPQGYKPPNEGPSEYQSIPLSKIEDFGVHCKQYYSLEITYFKSSLDQQL 236
Query: 246 LDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKE 305
LD LWNKYWVNTLSSSP+ N DY+ GQI+DL+EKLEQAE QLSHSR L K+
Sbjct: 237 LDKLWNKYWVNTLSSSPIFSNRDYITGQINDLSEKLEQAETQLSHSRSSIL------DKK 290
Query: 306 QEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQSTK 347
+E+S L+K+++DS+K+T+EQV G+MSQV K+ +FN Q+TK
Sbjct: 291 KEESLLSKVSKDSSKVTIEQVQGIMSQVFKNSIFNEC-QTTK 331
>FB|FBgn0027053 [details] [associations]
symbol:CSN5 "COP9 complex homolog subunit 5" species:7227
"Drosophila melanogaster" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome"
evidence=ISS;NAS;IMP;IDA;TAS] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP;TAS]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007310 "oocyte
dorsal/ventral axis specification" evidence=IMP] [GO:0007314
"oocyte anterior/posterior axis specification" evidence=IMP]
[GO:0000338 "protein deneddylation" evidence=IMP] [GO:0019781
"NEDD8 activating enzyme activity" evidence=IMP] [GO:0048477
"oogenesis" evidence=TAS] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0032435 "negative regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0005737 GO:GO:0007095 GO:GO:0050821 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0007409 GO:GO:0008180
eggNOG:COG1310 GO:GO:0001751 GO:GO:0008347 GO:GO:0045787
GO:GO:0032435 GO:GO:0007314 GO:GO:0000338 GO:GO:0019781 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
EMBL:AF129083 EMBL:AF132563 RefSeq:NP_477442.1 UniGene:Dm.1223
ProteinModelPortal:Q9XZ58 SMR:Q9XZ58 DIP:DIP-22022N IntAct:Q9XZ58
MINT:MINT-884235 STRING:Q9XZ58 PaxDb:Q9XZ58 PRIDE:Q9XZ58
EnsemblMetazoa:FBtr0083292 GeneID:42000 KEGG:dme:Dmel_CG14884
CTD:42000 FlyBase:FBgn0027053 InParanoid:Q9XZ58 OrthoDB:EOG4ZCRM3
PhylomeDB:Q9XZ58 ChiTaRS:COPS5 GenomeRNAi:42000 NextBio:826668
Bgee:Q9XZ58 GermOnline:CG14884 GO:GO:0007310 Uniprot:Q9XZ58
Length = 327
Score = 1152 (410.6 bits), Expect = 6.2e-117, P = 6.2e-117
Identities = 227/342 (66%), Positives = 264/342 (77%)
Query: 1 MDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYF 60
MDS AQKTWELENNI +T P+ D IF YD Q + KPW DPH+F
Sbjct: 1 MDSDAAQKTWELENNI---QTLPS--------CDEIFRYDAEQQRQIIDAKPWEKDPHFF 49
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQAD 120
K +KISALALLKMV+HARSGGT+EVMGLM GK + + +IVMDAFALPVEGTETRVNAQA
Sbjct: 50 KDIKISALALLKMVMHARSGGTLEVMGLMLGKVEDNTMIVMDAFALPVEGTETRVNAQAQ 109
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
AYEYM Y + K+ GR+E+AVGWYHSHPGYGCWLSGIDVSTQMLNQ +QEPF+A+V+DP
Sbjct: 110 AYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDP 169
Query: 181 TRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSS 240
RTVSAGKV +GAFRTYP+GYKPP+E SEYQTIPLNKIEDFGVHCKQYY L+I+YFKS+
Sbjct: 170 VRTVSAGKVCLGAFRTYPKGYKPPNEEPSEYQTIPLNKIEDFGVHCKQYYPLEISYFKSA 229
Query: 241 LDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPP 300
LD LLD LWNKYWVNTL SS LL N +Y GQI DL+EKLEQ+EN L G +
Sbjct: 230 LDRRLLDSLWNKYWVNTLGSSGLLTNTEYTTGQIMDLSEKLEQSENFLGR---GTDV--- 283
Query: 301 PRRKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 342
K ED +L+K TRD ++ T+E +HGLM+Q++KD LFN V
Sbjct: 284 -NEKRSED-KLSKATRDCSRSTIELIHGLMAQIVKDKLFNKV 323
>WB|WBGene00000817 [details] [associations]
symbol:csn-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] [GO:0008180 "signalosome" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017151 "DEAD/H-box RNA helicase binding" evidence=IPI]
[GO:0008022 "protein C-terminus binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0031672 "A band" evidence=IDA]
[GO:0000338 "protein deneddylation" evidence=IGI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0009792
GO:GO:0040007 GO:GO:0030154 GO:GO:0008406 GO:GO:0002119
GO:GO:0046872 GO:GO:0006508 GO:GO:0048477 GO:GO:0008237
GO:GO:0000910 GO:GO:0040035 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000338 HOGENOM:HOG000116528 KO:K09613 OMA:IFHYDDA
EMBL:FO080232 PIR:T29320 RefSeq:NP_500841.1
ProteinModelPortal:P91001 SMR:P91001 DIP:DIP-26100N IntAct:P91001
MINT:MINT-114117 STRING:P91001 MEROPS:M67.002 PaxDb:P91001
PRIDE:P91001 EnsemblMetazoa:B0547.1.1 EnsemblMetazoa:B0547.1.2
GeneID:177342 KEGG:cel:CELE_B0547.1 UCSC:B0547.1.1 CTD:177342
WormBase:B0547.1 GeneTree:ENSGT00550000074850 InParanoid:P91001
NextBio:896356 GO:GO:0031672 Uniprot:P91001
Length = 368
Score = 966 (345.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 183/337 (54%), Positives = 237/337 (70%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
SS+ Q+ WE ENN+ ++ D+IF Y+ Q + + KPW DPHYFK+
Sbjct: 10 SSVPQRNWEKENNVQNV--------------DSIFEYNNKQQVEIRNAKPWDKDPHYFKQ 55
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
+KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AY
Sbjct: 56 IKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAY 115
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM YS+ GR E VGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP R
Sbjct: 116 EYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLR 175
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV+IGAFRTYPEGY+PPD+ SEYQ+IPL KIEDFGVHCK+YYSLD+++FKS LD
Sbjct: 176 TMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLD 235
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
H+L LWN YW++TLSSSPL N +++ QI D+ +KL + +L +
Sbjct: 236 AHILTSLWNSYWISTLSSSPLFSNVEFLNNQIQDINQKLSAVDKKLQLND---------- 285
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILF 339
R L K+ D+ + E G +S ++K +LF
Sbjct: 286 RSVDGHEALMKVVTDAKAVGDELETGRISHLVKQLLF 322
Score = 37 (18.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 347 KTHAEPSDPEPMIE 360
K PS PEP +E
Sbjct: 351 KAGPSPSAPEPAVE 364
>UNIPROTKB|P91001 [details] [associations]
symbol:csn-5 "COP9 signalosome complex subunit 5"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0009792 GO:GO:0040007 GO:GO:0030154 GO:GO:0008406
GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0048477
GO:GO:0008237 GO:GO:0000910 GO:GO:0040035 GO:GO:0008180
eggNOG:COG1310 GO:GO:0000338 HOGENOM:HOG000116528 KO:K09613
OMA:IFHYDDA EMBL:FO080232 PIR:T29320 RefSeq:NP_500841.1
ProteinModelPortal:P91001 SMR:P91001 DIP:DIP-26100N IntAct:P91001
MINT:MINT-114117 STRING:P91001 MEROPS:M67.002 PaxDb:P91001
PRIDE:P91001 EnsemblMetazoa:B0547.1.1 EnsemblMetazoa:B0547.1.2
GeneID:177342 KEGG:cel:CELE_B0547.1 UCSC:B0547.1.1 CTD:177342
WormBase:B0547.1 GeneTree:ENSGT00550000074850 InParanoid:P91001
NextBio:896356 GO:GO:0031672 Uniprot:P91001
Length = 368
Score = 966 (345.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 183/337 (54%), Positives = 237/337 (70%)
Query: 3 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 62
SS+ Q+ WE ENN+ ++ D+IF Y+ Q + + KPW DPHYFK+
Sbjct: 10 SSVPQRNWEKENNVQNV--------------DSIFEYNNKQQVEIRNAKPWDKDPHYFKQ 55
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
+KISA+ALLKM +HA+ GG +E+MGL+QG+ D ++ I++D FALPVEGTETRVNAQA AY
Sbjct: 56 IKISAIALLKMTMHAKRGGNLEIMGLLQGRIDANSFIILDVFALPVEGTETRVNAQAQAY 115
Query: 123 EYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTR 182
EYM YS+ GR E VGWYHSHPGYGCWLSGIDVSTQ LNQ+FQEP++A+VIDP R
Sbjct: 116 EYMTVYSEMCDTEGRKEKVVGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLR 175
Query: 183 TVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLD 242
T+SAGKV+IGAFRTYPEGY+PPD+ SEYQ+IPL KIEDFGVHCK+YYSLD+++FKS LD
Sbjct: 176 TMSAGKVDIGAFRTYPEGYRPPDDVPSEYQSIPLAKIEDFGVHCKRYYSLDVSFFKSQLD 235
Query: 243 CHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPR 302
H+L LWN YW++TLSSSPL N +++ QI D+ +KL + +L +
Sbjct: 236 AHILTSLWNSYWISTLSSSPLFSNVEFLNNQIQDINQKLSAVDKKLQLND---------- 285
Query: 303 RKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILF 339
R L K+ D+ + E G +S ++K +LF
Sbjct: 286 RSVDGHEALMKVVTDAKAVGDELETGRISHLVKQLLF 322
Score = 37 (18.1 bits), Expect = 4.7e-99, Sum P(2) = 4.7e-99
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 347 KTHAEPSDPEPMIE 360
K PS PEP +E
Sbjct: 351 KAGPSPSAPEPAVE 364
>UNIPROTKB|G4N5N6 [details] [associations]
symbol:MGG_05274 "COP9 signalosome complex subunit 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:CM001233 KO:K09613 MEROPS:M67.002
RefSeq:XP_003712833.1 ProteinModelPortal:G4N5N6
EnsemblFungi:MGG_05274T0 GeneID:2675301 KEGG:mgr:MGG_05274
Uniprot:G4N5N6
Length = 344
Score = 933 (333.5 bits), Expect = 1.0e-93, P = 1.0e-93
Identities = 180/342 (52%), Positives = 235/342 (68%)
Query: 5 IAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVK 64
+A K+WEL+NN+ ++ P+ DA++ YD +Q Q++PW DP+YFK V+
Sbjct: 3 VAMKSWELDNNVKLVD--PSR--------DALYNYDAESQKAINQQRPWAKDPNYFKSVR 52
Query: 65 ISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEY 124
ISA+AL+KMV+HARSGG++EVMG+MQG DG A++V DAF LPVEGTETRVNA +A EY
Sbjct: 53 ISAIALIKMVMHARSGGSLEVMGMMQGYVDGTALVVTDAFRLPVEGTETRVNAHDEANEY 112
Query: 125 MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTV 184
+V+Y + +++ GRLEN VGWYHSHPGYGCWLSGIDVSTQ L QQF +PF+AVVIDP RT+
Sbjct: 113 LVEYLRLSREQGRLENVVGWYHSHPGYGCWLSGIDVSTQFLQQQFMDPFVAVVIDPDRTI 172
Query: 185 SAGKVEIGAFRTYPEGYKPPDEPISE-YQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDC 243
SAGKVEIGAFRTYPE YK + S+ YQ +PL K EDFG H +YY+L+ +FKS+LD
Sbjct: 173 SAGKVEIGAFRTYPENYKAEEASTSDGYQPVPLAKAEDFGAHASRYYALETEHFKSTLDA 232
Query: 244 HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLE------QAENQLSHSRYGPLI 297
HLL+LLWNKYWV TLS SPL+ N DY Q+ DL ++ Q + S YG +
Sbjct: 233 HLLELLWNKYWVQTLSQSPLITNRDYGNKQMLDLGSRIRDVVGVMQRNGRSGQSGYGMAL 292
Query: 298 APPPRRKEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILF 339
+ +S + + RDS + Q LM+ +K +F
Sbjct: 293 GGASGTSKAVESAIETMARDSMHVAASQRAALMAGELKAKVF 334
>ASPGD|ASPL0000041877 [details] [associations]
symbol:csnE species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0008180
"signalosome" evidence=ISS;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=TAS] [GO:0010388 "cullin deneddylation"
evidence=TAS] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0045116
"protein neddylation" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 GO:GO:0046872 EMBL:BN001307
GO:GO:0006508 GO:GO:0008237 EMBL:AACD01000032 GO:GO:0008180
eggNOG:COG1310 HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL
EMBL:AY126455 RefSeq:XP_659733.1 ProteinModelPortal:Q5BBF1
STRING:Q5BBF1 EnsemblFungi:CADANIAT00008806 GeneID:2875469
KEGG:ani:AN2129.2 OrthoDB:EOG4HDX37 Uniprot:Q5BBF1
Length = 335
Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
Identities = 181/339 (53%), Positives = 232/339 (68%)
Query: 6 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKI 65
AQ +WELEN + ++ P D+++ YDE +PW DPHYFK V+I
Sbjct: 4 AQLSWELENAVTLID--PQR--------DSLYRYDEETHKYLSDTRPWTKDPHYFKSVRI 53
Query: 66 SALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYM 125
SA+ALLKMV+HARSGG++EVMGLMQG + +V DAF LPVEGTETRVNAQ +A EYM
Sbjct: 54 SAVALLKMVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEANEYM 113
Query: 126 VDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVS 185
V Y Q+ ++AGR+ENAVGWYHSHPGYGCWLSGIDVSTQ + QQ PF+AVVIDP RT+S
Sbjct: 114 VSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDM-QQMSGPFVAVVIDPERTIS 172
Query: 186 AGKVEIGAFRTYPEGYKPPDEPISE--YQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDC 243
AGKV+IGAFRT+P+ Y PP E E YQT+PLNK EDFG H YYSL+++ FKS+LD
Sbjct: 173 AGKVDIGAFRTFPKDYTPPKEEQEEDEYQTVPLNKAEDFGAHASHYYSLEVSLFKSALDT 232
Query: 244 HLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLSHSRYGPLIAPPPRR 303
+L LLWNKYWV TLS SPL DY + Q+ DL++K + + + P P +
Sbjct: 233 EILSLLWNKYWVATLSQSPLFTTRDYGSKQMLDLSQKTRRVARGIESNP--PRGGAPTQV 290
Query: 304 KEQEDSQLAKITRDSAKITVEQVHGLMSQVIKDILFNSV 342
++Q QL ++ +D +I E+V GL++ +K LF +
Sbjct: 291 RDQ---QLERVVKDGQRIVSEEVKGLLAAEVKMQLFQGI 326
>UNIPROTKB|E5RHF2 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0051726
GO:GO:0008180 ChiTaRS:COPS5 HGNC:HGNC:2240 EMBL:AC109335
EMBL:AC110998 IPI:IPI00985306 ProteinModelPortal:E5RHF2 SMR:E5RHF2
Ensembl:ENST00000518747 ArrayExpress:E5RHF2 Bgee:E5RHF2
Uniprot:E5RHF2
Length = 151
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 125/151 (82%), Positives = 137/151 (90%)
Query: 73 MVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTN 132
MV+HARSGG +EVMGLM GK DG+ +I+MD+FALPVEGTETRVNAQA AYEYM Y +
Sbjct: 1 MVMHARSGGNLEVMGLMLGKVDGETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENA 60
Query: 133 KQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIG 192
KQ GRLENA+GWYHSHPGYGCWLSGIDVSTQMLNQQFQEPF+AVVIDPTRT+SAGKV +G
Sbjct: 61 KQVGRLENAIGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRTISAGKVNLG 120
Query: 193 AFRTYPEGYKPPDEPISEYQTIPLNKIEDFG 223
AFRTYP+GYKPPDE SEYQTIPLNKIEDFG
Sbjct: 121 AFRTYPKGYKPPDEGPSEYQTIPLNKIEDFG 151
>POMBASE|SPAC1687.13c [details] [associations]
symbol:csn5 "COP9/signalosome complex subunit Csn5"
species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IGI] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPAC1687.13c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0008180 eggNOG:COG1310 GO:GO:0004843 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:IFHYDDA MEROPS:M67.002
OrthoDB:EOG4HDX37 PIR:T37756 RefSeq:NP_593131.1
ProteinModelPortal:O94454 STRING:O94454 EnsemblFungi:SPAC1687.13c.1
GeneID:2541529 KEGG:spo:SPAC1687.13c NextBio:20802626
Uniprot:O94454
Length = 299
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 116/241 (48%), Positives = 160/241 (66%)
Query: 36 IFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDG 95
+F +DE + +E PW +DP +F+ VKISA+ALLKM+ H G +EVMG +QGK +G
Sbjct: 8 VFRFDEEKERAKIRESPWKHDPEFFRSVKISAVALLKMLRHVSQGMPLEVMGYVQGKVEG 67
Query: 96 DAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWL 155
++I++D+FALPVEGTETRVNA +A EY V Y K R EN +GWYHSHP YGCWL
Sbjct: 68 ASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWL 127
Query: 156 SGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGY------KPPDEPIS 209
SG+DV TQ NQ++Q+PF+AVV+DP R++ + V IGAFRTYP G K P
Sbjct: 128 SGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVGNDGSIRTKSRHHPSV 187
Query: 210 EYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDY 269
++ +P +KIED G H + YYSL ITYF S + + + L N+ W +++ +L N ++
Sbjct: 188 LFKNLPSSKIEDAGAHAEAYYSLPITYFHSKAEKKVTEFLRNRNWSRSITECSILQNNEF 247
Query: 270 V 270
+
Sbjct: 248 L 248
>DICTYBASE|DDB_G0272566 [details] [associations]
symbol:psmD14 "putative multidrug resistance protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0272566 GO:GO:0045335
GO:GO:0046872 GenomeReviews:CM000151_GR GO:GO:0008237 GO:GO:0004175
EMBL:AAFI02000008 GO:GO:0000502 GO:GO:0006511 eggNOG:COG1310
MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012 KO:K03030
OMA:MVLGQEP EMBL:U96916 RefSeq:XP_644863.1
ProteinModelPortal:Q86IJ1 STRING:Q86IJ1 EnsemblProtists:DDB0191298
GeneID:8618542 KEGG:ddi:DDB_G0272566 ProtClustDB:CLSZ2438686
Uniprot:Q86IJ1
Length = 306
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 109/306 (35%), Positives = 154/306 (50%)
Query: 41 EGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKT-DGDAII 99
EG K P P + + IS+LALLKM+ HAR+G +EVMGLM G+ D I
Sbjct: 12 EGLGEKITDATPL---PDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIR 68
Query: 100 VMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGI 158
V+D FA+P GT V A ++ M+D KQ GR E +GWYHSHPG+GCWLS +
Sbjct: 69 VIDVFAMPQSGTSVSVEAIDPVFQTKMLDML---KQTGRDEIVIGWYHSHPGFGCWLSSV 125
Query: 159 DVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNK 218
DV+TQ +Q Q +AVV+DP ++V GKV I AFRT P EP T L
Sbjct: 126 DVNTQQSFEQLQSRAVAVVVDPLQSVR-GKVVIDAFRTIKTS--PTAEP--RQITSNLGH 180
Query: 219 IEDFGVHC------KQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAG 272
++D + + YYS+ I Y K+ L+ +L L K W L +
Sbjct: 181 LQDPSIQALIHGLNRNYYSIAINYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEK 240
Query: 273 QISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEQEDSQLAKITRDSAKITVEQVHGLMSQ 332
QI++L E +Q + + I P +++E S + K+ D + + VH LM+
Sbjct: 241 QINNLLELTKQYQKSIQDE---DKIEP----EKKEVSAVGKL--DPKRHLISDVHTLMAN 291
Query: 333 VIKDIL 338
+ +L
Sbjct: 292 NVVRVL 297
>SGD|S000002375 [details] [associations]
symbol:RRI1 "Catalytic subunit of the COP9 signalosome (CSN)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0010388
"cullin deneddylation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IEA;IDA] [GO:0000754 "adaptation of signaling pathway by
response to pheromone involved in conjugation with cellular fusion"
evidence=IMP] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IMP] [GO:0008237 "metallopeptidase activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 SGD:S000002375
GO:GO:0005737 GO:GO:0046872 GO:GO:0006508 EMBL:BK006938
GO:GO:0004222 EMBL:X99000 GO:GO:0008180 eggNOG:COG1310
GO:GO:0000754 GO:GO:0010388 KO:K09613 MEROPS:M67.002
GeneTree:ENSGT00550000074850 OrthoDB:EOG4HDX37 EMBL:Z74264
PIR:S67775 RefSeq:NP_010065.2 ProteinModelPortal:Q12468
DIP:DIP-1809N IntAct:Q12468 MINT:MINT-411234 STRING:Q12468
EnsemblFungi:YDL216C GeneID:851310 KEGG:sce:YDL216C
HOGENOM:HOG000112018 OMA:YYELETI NextBio:968331
Genevestigator:Q12468 GermOnline:YDL216C Uniprot:Q12468
Length = 440
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 82/179 (45%), Positives = 110/179 (61%)
Query: 44 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDA 103
+TK +Q+ + P Y V IS L+ K+ +A GG IE+MG++ G T D I+VMD
Sbjct: 54 KTKLKQQSS-TDIPSY-THVLISKLSCEKITHYAVRGGNIEIMGILMGFTLKDNIVVMDC 111
Query: 104 FALPVEGTETRVNAQADAYEYMVDY--SQTNKQAG---------RLENAVGWYHSHPGYG 152
F LPV GTETRVNAQ ++YEYMV Y N G +L N VGW+HSHPGY
Sbjct: 112 FNLPVVGTETRVNAQLESYEYMVQYIDEMYNHNDGGDGRDYKGAKL-NVVGWFHSHPGYD 170
Query: 153 CWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEY 211
CWLS ID+ TQ LNQ+FQ+P++A+V+DP +++ + +GAFRT K D + Y
Sbjct: 171 CWLSNIDIQTQDLNQRFQDPYVAIVVDPLKSLEDKILRMGAFRTIES--KSDDNSATSY 227
>UNIPROTKB|Q17QP9 [details] [associations]
symbol:PSMD14 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 14" species:9913 "Bos taurus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA] [GO:0070628 "proteasome
binding" evidence=IDA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0061133 "endopeptidase
activator activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000502 GO:GO:0061133
GO:GO:0070628 eggNOG:COG1310 MEROPS:M67.001 GO:GO:0004221
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742 OrthoDB:EOG4R23V7
EMBL:DAAA02004429 EMBL:DAAA02004430 EMBL:BC118241 IPI:IPI00689118
RefSeq:NP_001069535.1 UniGene:Bt.31257 SMR:Q17QP9 STRING:Q17QP9
Ensembl:ENSBTAT00000046166 GeneID:535683 KEGG:bta:535683
InParanoid:Q17QP9 NextBio:20876811 Uniprot:Q17QP9
Length = 310
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 94/234 (40%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 254
>UNIPROTKB|O00487 [details] [associations]
symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
14" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP;TAS]
[GO:0008237 "metallopeptidase activity" evidence=TAS] [GO:0070536
"protein K63-linked deubiquitination" evidence=IMP;TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0061133 "endopeptidase activator activity" evidence=IMP]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IMP] [GO:0070628 "proteasome binding" evidence=IDA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0010950 "positive regulation of endopeptidase
activity" evidence=IMP] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0046872 GO:GO:0000082 GO:GO:0008237 EMBL:CH471058
GO:GO:0051436 GO:GO:0000724 GO:GO:0061133 GO:GO:0070628
GO:GO:0008541 GO:GO:0000216 GO:GO:0000209 eggNOG:COG1310
GO:GO:0070536 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
GO:GO:0006303 MEROPS:M67.001 GO:GO:0004221 GO:GO:0006521
GO:GO:0061136 Reactome:REACT_383 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP EMBL:U86782
EMBL:AK055128 EMBL:BC066336 IPI:IPI00024821 RefSeq:NP_005796.1
UniGene:Hs.740477 ProteinModelPortal:O00487 SMR:O00487
IntAct:O00487 STRING:O00487 PhosphoSite:O00487 OGP:O00487
REPRODUCTION-2DPAGE:IPI00024821 PaxDb:O00487 PeptideAtlas:O00487
PRIDE:O00487 Ensembl:ENST00000409682 GeneID:10213 KEGG:hsa:10213
UCSC:uc002ubu.2 CTD:10213 GeneCards:GC02P162164 HGNC:HGNC:16889
HPA:HPA002114 MIM:607173 neXtProt:NX_O00487 PharmGKB:PA134957776
HOVERGEN:HBG053742 InParanoid:O00487 OrthoDB:EOG4R23V7
BindingDB:O00487 ChEMBL:CHEMBL2007629 GenomeRNAi:10213
NextBio:38668 ArrayExpress:O00487 Bgee:O00487 CleanEx:HS_PSMD14
Genevestigator:O00487 GermOnline:ENSG00000115233 Uniprot:O00487
Length = 310
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 94/234 (40%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 254
>UNIPROTKB|F1RPQ3 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070628 "proteasome binding" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0061133
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CU571357
Ensembl:ENSSSCT00000017304 Uniprot:F1RPQ3
Length = 310
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 94/234 (40%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 254
>MGI|MGI:1913284 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=ISO] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0061133 "endopeptidase activator
activity" evidence=ISO] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070628 "proteasome
binding" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913284 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0004175 GO:GO:0000724 GO:GO:0061133
GO:GO:0008541 eggNOG:COG1310 GO:GO:0070536 GO:GO:0006303
MEROPS:M67.001 GO:GO:0004221 GO:GO:0061136 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 EMBL:Y13071 EMBL:AK012013 EMBL:AK151104
EMBL:AK151733 EMBL:BC003742 IPI:IPI00113262 RefSeq:NP_067501.2
UniGene:Mm.218198 ProteinModelPortal:O35593 SMR:O35593
IntAct:O35593 MINT:MINT-4049993 STRING:O35593 PhosphoSite:O35593
REPRODUCTION-2DPAGE:O35593 PaxDb:O35593 PRIDE:O35593
Ensembl:ENSMUST00000028278 GeneID:59029 KEGG:mmu:59029
InParanoid:O35593 BindingDB:O35593 ChiTaRS:PSMD14 NextBio:314614
Bgee:O35593 Genevestigator:O35593 GermOnline:ENSMUSG00000026914
Uniprot:O35593
Length = 310
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 94/234 (40%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 254
>RGD|1594532 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10116 "Rattus norvegicus" [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0022624 "proteasome accessory complex" evidence=ISO]
[GO:0061133 "endopeptidase activator activity" evidence=ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=ISO] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISO] [GO:0070628 "proteasome binding" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0000502 GO:GO:0061133 eggNOG:COG1310 MEROPS:M67.001
EMBL:CH473949 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 IPI:IPI00372125 EMBL:BC097427 EMBL:BC158645
RefSeq:NP_001020860.1 UniGene:Rn.161794 SMR:Q4V8E2 IntAct:Q4V8E2
STRING:Q4V8E2 GeneID:311078 KEGG:rno:311078 UCSC:RGD:1594532
InParanoid:Q4V8E2 NextBio:662956 Genevestigator:Q4V8E2
Uniprot:Q4V8E2
Length = 310
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 94/234 (40%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 254
>UNIPROTKB|F1LMW6 [details] [associations]
symbol:Psmd14 "Protein Psmd14" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA] [GO:0070628 "proteasome binding" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 IPI:IPI00372125
Ensembl:ENSRNOT00000006605 ArrayExpress:F1LMW6 Uniprot:F1LMW6
Length = 294
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 94/234 (40%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 13 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 72
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 73 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 129
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 130 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 187
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ S + E LE A+N
Sbjct: 188 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKHNESVVKEMLELAKN 238
>TAIR|locus:2171696 [details] [associations]
symbol:AT5G23540 "AT5G23540" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0006508 GO:GO:0008237 GO:GO:0030163 GO:GO:0000502
eggNOG:COG1310 MEROPS:M67.001 EMBL:AB025633 InterPro:IPR024969
Pfam:PF13012 EMBL:AY230843 EMBL:AY230844 EMBL:AY230845
EMBL:AY070073 EMBL:AY091329 EMBL:AY086277 IPI:IPI00538427
RefSeq:NP_197745.1 UniGene:At.22926 ProteinModelPortal:Q9LT08
SMR:Q9LT08 IntAct:Q9LT08 STRING:Q9LT08 PaxDb:Q9LT08 PRIDE:Q9LT08
DNASU:832420 EnsemblPlants:AT5G23540.1 GeneID:832420
KEGG:ath:AT5G23540 TAIR:At5g23540 HOGENOM:HOG000183690
InParanoid:Q9LT08 KO:K03030 OMA:MVLGQEP PhylomeDB:Q9LT08
ProtClustDB:CLSN2686290 Genevestigator:Q9LT08 GermOnline:AT5G23540
Uniprot:Q9LT08
Length = 308
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 87/207 (42%), Positives = 122/207 (58%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 28 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 87
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+
Sbjct: 88 HVFQTNMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVV 144
Query: 179 DPTRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR+ P+ EP + LNK I+ +H + YYS+
Sbjct: 145 DPIQSVK-GKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 202
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLS 259
I Y K+ L+ +L L K W + L+
Sbjct: 203 AINYRKNELEEKMLLNLHKKKWTDGLT 229
>CGD|CAL0003932 [details] [associations]
symbol:orf19.7264 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0000266 "mitochondrial fission"
evidence=IEA] [GO:0016559 "peroxisome fission" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 CGD:CAL0003932
eggNOG:COG1310 MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012
EMBL:AACQ01000092 HOGENOM:HOG000183690 KO:K03030 RefSeq:XP_715061.1
ProteinModelPortal:Q59ZS7 STRING:Q59ZS7 GeneID:3643326
KEGG:cal:CaO19.7264 Uniprot:Q59ZS7
Length = 312
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 92/225 (40%), Positives = 126/225 (56%)
Query: 42 GAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIV 100
G Q + P +++ + V IS+LALLKM+ H R+G +EVMGLM G+ D I V
Sbjct: 15 GGAAPTQSDGPAIDNS---ETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDFTIHV 71
Query: 101 MDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGID 159
D FA+P GT V A D ++ M+D +Q GR + VGWYHSHPG+GCWLS +D
Sbjct: 72 HDVFAMPQSGTGVSVEAVDDVFQTKMMDML---RQTGRDQMVVGWYHSHPGFGCWLSSVD 128
Query: 160 VSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG-YKPPDEPISEYQTIP-LN 217
V+TQ +Q + +AVVIDP ++V GKV I AFRT EP + LN
Sbjct: 129 VNTQQSFEQLNKRAVAVVIDPIQSVK-GKVVIDAFRTIDTTTLMMGQEPRQSTSNVGHLN 187
Query: 218 K--IEDFGVHC--KQYYSLDITYFKSSLDCHLLDLLWNKYWVNTL 258
K I+ +H + YYSL+I Y K+ + ++L L K W + L
Sbjct: 188 KPSIQAL-IHGLNRHYYSLNIDYHKTEYETNMLLNLHKKNWQSGL 231
>FB|FBgn0028694 [details] [associations]
symbol:Rpn11 "Regulatory particle non-ATPase 11" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IMP;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005875 EMBL:AE014134 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0004175 GO:GO:0008541
GO:GO:0032436 GO:GO:0009987 eggNOG:COG1310 MEROPS:M67.001
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
KO:K03030 OMA:MVLGQEP EMBL:AF145313 EMBL:AY070977 EMBL:AF195189
RefSeq:NP_608905.1 UniGene:Dm.3343 ProteinModelPortal:Q9V3H2
SMR:Q9V3H2 IntAct:Q9V3H2 MINT:MINT-819727 STRING:Q9V3H2
PaxDb:Q9V3H2 PRIDE:Q9V3H2 EnsemblMetazoa:FBtr0079027 GeneID:33738
KEGG:dme:Dmel_CG18174 CTD:33738 FlyBase:FBgn0028694
InParanoid:Q9V3H2 OrthoDB:EOG4SQVC9 PhylomeDB:Q9V3H2
GenomeRNAi:33738 NextBio:785010 Bgee:Q9V3H2 GermOnline:CG18174
Uniprot:Q9V3H2
Length = 308
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 92/235 (39%), Positives = 129/235 (54%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 27 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVD 86
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 87 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 143
Query: 179 DPTRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIPLNKIEDFGVHC------KQYYS 231
DP ++V GKV I AFR P EP T L ++ V + YYS
Sbjct: 144 DPIQSVK-GKVVIDAFRLINPNMLVLGQEP--RQTTSNLGHLQKPSVQALIHGLNRHYYS 200
Query: 232 LDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
+ I Y K+ L+ +L L K W + L+ S ++ + +AE L+ A+N
Sbjct: 201 ISINYRKNELEQKMLLNLHKKSWKDGLTLSDY---NEHCSINEDTVAEMLDLAKN 252
>UNIPROTKB|E1C6N0 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0061133 "endopeptidase activator activity"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0070628 "proteasome binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:AADN02058674
IPI:IPI00604055 Ensembl:ENSGALT00000018142 ArrayExpress:E1C6N0
Uniprot:E1C6N0
Length = 300
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 93/234 (39%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 19 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 78
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 79 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 135
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 136 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 193
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ + + E LE A+N
Sbjct: 194 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKLNETVVKEMLELAKN 244
>ZFIN|ZDB-GENE-070410-56 [details] [associations]
symbol:psmd14 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 14" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 ZFIN:ZDB-GENE-070410-56 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CR450841
IPI:IPI00800873 PRIDE:F1QHE5 Ensembl:ENSDART00000091901 Bgee:F1QHE5
Uniprot:F1QHE5
Length = 310
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 93/234 (39%), Positives = 130/234 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVD 88
Query: 120 DAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+
Sbjct: 89 PVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVV 145
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKP-PDEPISEYQTIP-LNK--IEDFGVHC--KQYYSL 232
DP ++V GKV I AFR EP + LNK I+ +H + YYS+
Sbjct: 146 DPIQSVK-GKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAEN 286
I Y K+ L+ +L L K W+ L+ L ++ + + E LE A+N
Sbjct: 204 TINYRKNELEQKMLLNLHKKSWMEGLT---LQDYSEHCKLNETIVKEMLELAKN 254
>SGD|S000001900 [details] [associations]
symbol:RPN11 "Metalloprotease subunit of the 19S regulatory
particle of the 26S pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016559 "peroxisome fission" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IMP] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=IGI;IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0000266
"mitochondrial fission" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 SGD:S000001900 GO:GO:0005739
GO:GO:0005634 GO:GO:0043161 EMBL:D50617 EMBL:BK006940 GO:GO:0008237
GO:GO:0016559 GO:GO:0008541 eggNOG:COG1310 MEROPS:M67.001
GO:GO:0004843 GO:GO:0016579 GO:GO:0000266 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
OrthoDB:EOG40CMRT EMBL:X79561 EMBL:AY152546 EMBL:AY692755
PIR:S56259 RefSeq:NP_116659.1 ProteinModelPortal:P43588 SMR:P43588
DIP:DIP-1573N IntAct:P43588 MINT:MINT-405184 STRING:P43588
PaxDb:P43588 PeptideAtlas:P43588 PRIDE:P43588 EnsemblFungi:YFR004W
GeneID:850554 KEGG:sce:YFR004W CYGD:YFR004w NextBio:966339
Genevestigator:P43588 GermOnline:YFR004W Uniprot:P43588
Length = 306
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 86/203 (42%), Positives = 118/203 (58%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS++ALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A D
Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDV 86
Query: 122 YEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D KQ GR + VGWYHSHPG+GCWLS +DV+TQ +Q +AVV+DP
Sbjct: 87 FQAKMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDP 143
Query: 181 TRTVSAGKVEIGAFRTYPEGYKPPD-EPI-SEYQTIPLNKIEDFG-VHC--KQYYSLDIT 235
++V GKV I AFR G + EP + T LNK +H + YYSL+I
Sbjct: 144 IQSVK-GKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNID 202
Query: 236 YFKSSLDCHLLDLLWNKYWVNTL 258
Y K++ + +L L + W + L
Sbjct: 203 YHKTAKETKMLMNLHKEQWQSGL 225
>ASPGD|ASPL0000076795 [details] [associations]
symbol:AN4492 species:162425 "Emericella nidulans"
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0000266
"mitochondrial fission" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034399 "nuclear
periphery" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0000502
EMBL:BN001303 InterPro:IPR024969 Pfam:PF13012
EnsemblFungi:CADANIAT00005953 OMA:GHAGADQ Uniprot:C8V8E2
Length = 338
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 88/234 (37%), Positives = 125/234 (53%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS+LALLKM+ H R+G +EVMGLM G+ D + V D FA+P GT V A
Sbjct: 35 VHISSLALLKMLRHGRAGVPMEVMGLMLGEFVDEYTVRVTDVFAMPQSGTGVSVEAVDPV 94
Query: 122 YEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D +Q GR E VGWYHSHPG+GCWLS +D++TQ +Q +AVV+DP
Sbjct: 95 FQTKMMDML---RQTGRPEPVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDP 151
Query: 181 TRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP-LNK--IEDFGVHC--KQYYSLDI 234
++V GKV I AFR P+ EP + LNK I+ +H + YYS+ I
Sbjct: 152 IQSVK-GKVVIDAFRLIQPQTVVMGQEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIGI 209
Query: 235 TYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQL 288
Y K+ L+ ++L L + W L + + ++ L E E ++
Sbjct: 210 NYRKTGLEENMLMNLHKQVWTEALQMNDFHDECQHNVDRMKQLVNLAEGYEKRV 263
>WB|WBGene00004467 [details] [associations]
symbol:rpn-11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0006508 GO:GO:0040011 GO:GO:0008237 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 87/206 (42%), Positives = 119/206 (57%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPV 92
Query: 122 YEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+DP
Sbjct: 93 FQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDP 149
Query: 181 TRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP-LNK--IEDFGVHC--KQYYSLDI 234
++V GKV I AFRT P+ EP + L K I+ +H + YYS+ I
Sbjct: 150 IQSVK-GKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQAL-IHGLNRHYYSIPI 207
Query: 235 TYFKSSLDCHLLDLLWNKY-WVNTLS 259
Y L+ +L L NK W++ +S
Sbjct: 208 AYRTHDLEQKML-LNLNKLSWMDAVS 232
>UNIPROTKB|O76577 [details] [associations]
symbol:rpn-11 "26S proteasome non-ATPase regulatory subunit
14" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0040011
GO:GO:0008237 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 GO:GO:0005838 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 87/206 (42%), Positives = 119/206 (57%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADA 121
V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPV 92
Query: 122 YEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDP 180
++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+DP
Sbjct: 93 FQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDP 149
Query: 181 TRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP-LNK--IEDFGVHC--KQYYSLDI 234
++V GKV I AFRT P+ EP + L K I+ +H + YYS+ I
Sbjct: 150 IQSVK-GKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQAL-IHGLNRHYYSIPI 207
Query: 235 TYFKSSLDCHLLDLLWNKY-WVNTLS 259
Y L+ +L L NK W++ +S
Sbjct: 208 AYRTHDLEQKML-LNLNKLSWMDAVS 232
>WB|WBGene00018135 [details] [associations]
symbol:F37A4.5 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000003 eggNOG:COG1310
EMBL:FO081312 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
PIR:S44642 RefSeq:NP_498470.1 UniGene:Cel.10529
ProteinModelPortal:P41883 SMR:P41883 IntAct:P41883 STRING:P41883
MEROPS:M67.A10 PaxDb:P41883 PRIDE:P41883 EnsemblMetazoa:F37A4.5.1
EnsemblMetazoa:F37A4.5.2 GeneID:185404 KEGG:cel:CELE_F37A4.5
UCSC:F37A4.5 CTD:185404 WormBase:F37A4.5 InParanoid:P41883
OMA:KMLRHAR NextBio:928158 Uniprot:P41883
Length = 319
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 93/229 (40%), Positives = 123/229 (53%)
Query: 44 QTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMD 102
Q K +K ++ P + V IS+LALLKM+ HARSG +EVMGLM G D I V D
Sbjct: 12 QNKQATDK--LDHPDTSETVNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTD 69
Query: 103 AFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVST 162
FA+P GT V + Y+ + K GR EN VGWYHSHPG+GCWLS +DV+T
Sbjct: 70 VFAMPQSGTSVTVESVDPVYQ--TKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSVDVNT 127
Query: 163 QMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTY-PEGYK-PPDEPISE-YQTIP---- 215
Q + +AVV+DP ++V GKV + AFR+ P + P P +E QT
Sbjct: 128 QQSFEALHPRAVAVVVDPIQSVK-GKVMLDAFRSVNPLNLQIRPLAPTAEPRQTTSNLGH 186
Query: 216 LNKIEDFGV-HC--KQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSS 261
L K V H +YYSL++ Y S + +L L K W + L+ S
Sbjct: 187 LTKPSLISVVHGLGTKYYSLNVAYRMGSNEQKMLMCLNKKSWYDQLNMS 235
>POMBASE|SPAC31G5.13 [details] [associations]
symbol:rpn11 "19S proteasome regulatory subunit Rpn11"
species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
complex" evidence=IDA;IPI] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0033554
"cellular response to stress" evidence=IMP] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IC] [GO:0046898 "response to
cycloheximide" evidence=IEA] [GO:0071947 "protein deubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
PomBase:SPAC31G5.13 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0046677 GO:GO:0035690
GO:GO:0000502 eggNOG:COG1310 GO:GO:0071313 GO:GO:0097237
GO:GO:0034399 MEROPS:M67.001 GO:GO:0004843 GO:GO:0046898
InterPro:IPR024969 Pfam:PF13012 EMBL:D84656 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:D31731 EMBL:D45047 PIR:T43293 PIR:T44427
RefSeq:NP_594014.1 ProteinModelPortal:P41878 IntAct:P41878
STRING:P41878 PRIDE:P41878 EnsemblFungi:SPAC31G5.13.1
GeneID:2543040 KEGG:spo:SPAC31G5.13 OrthoDB:EOG40CMRT
NextBio:20804070 GO:GO:0071947 Uniprot:P41878
Length = 308
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 99/276 (35%), Positives = 143/276 (51%)
Query: 41 EGAQ--TKFQQEKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDA 97
+GA+ T ++P V++ V IS+LALLKM+ H R G +EVMGLM G+ D
Sbjct: 9 QGARMGTGMMGDQPLVDNSEC---VYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFT 65
Query: 98 IIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLS 156
+ V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLS
Sbjct: 66 VRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDML---KQTGRPEMVVGWYHSHPGFGCWLS 122
Query: 157 GIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTY-PEGYKPPDEPISEYQTIP 215
+D++TQ +Q +AVV+DP ++V GKV I AFR P EP +
Sbjct: 123 SVDINTQQSFEQLTPRAVAVVVDPIQSVK-GKVVIDAFRLINPSTLMMGQEPRQTTSNLG 181
Query: 216 -LNK--IEDFGVHC--KQYYSLDITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNGDYV 270
+NK I+ +H + YYSL I Y K+ L+ +L L + W + L LL N +
Sbjct: 182 HINKPSIQAL-IHGLGRHYYSLRINYKKTELEEIMLLNLHKQPWAHGL----LLENFNSA 236
Query: 271 AGQISDLAEKLEQAENQLSHSRYGPLIAPPPRRKEQ 306
A + +K++ Q + + P + + Q
Sbjct: 237 AEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRIQ 272
>GENEDB_PFALCIPARUM|MAL13P1.343 [details] [associations]
symbol:MAL13P1.343 "proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 82/205 (40%), Positives = 113/205 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS LALLK++ H R+G +EVMGLM G+ D I ++D FA+P G V A
Sbjct: 31 EQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVSVEAVD 90
Query: 120 DAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVID 179
Y+ + + K+ GR E VGWYHSHPG+GCWLSG DV+TQ +Q + VV+D
Sbjct: 91 PVYQ--TNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGVVVD 148
Query: 180 PTRTVSAGKVEIGAFRTY-PE----GYKPPDEPIS-EYQTIPLNKIEDFGVHCKQYYSLD 233
P ++V GKV I FR P G +P + Y T P G++ + YYS+
Sbjct: 149 PIQSVK-GKVVIDCFRLINPHILMLGQEPRQTTSNIGYLTKPTLTALVHGLN-RNYYSIV 206
Query: 234 ITYFKSSLDCHLLDLLWNKYWVNTL 258
I Y K+ L+ ++L L W N L
Sbjct: 207 INYRKNELEKNMLLNLHKDMWTNPL 231
>UNIPROTKB|Q8ID28 [details] [associations]
symbol:MAL13P1.343 "Proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 82/205 (40%), Positives = 113/205 (55%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQA 119
++V IS LALLK++ H R+G +EVMGLM G+ D I ++D FA+P G V A
Sbjct: 31 EQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNSVSVEAVD 90
Query: 120 DAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVID 179
Y+ + + K+ GR E VGWYHSHPG+GCWLSG DV+TQ +Q + VV+D
Sbjct: 91 PVYQ--TNMLEELKKTGRHEMVVGWYHSHPGFGCWLSGTDVNTQKSFEQLNPRTIGVVVD 148
Query: 180 PTRTVSAGKVEIGAFRTY-PE----GYKPPDEPIS-EYQTIPLNKIEDFGVHCKQYYSLD 233
P ++V GKV I FR P G +P + Y T P G++ + YYS+
Sbjct: 149 PIQSVK-GKVVIDCFRLINPHILMLGQEPRQTTSNIGYLTKPTLTALVHGLN-RNYYSIV 206
Query: 234 ITYFKSSLDCHLLDLLWNKYWVNTL 258
I Y K+ L+ ++L L W N L
Sbjct: 207 INYRKNELEKNMLLNLHKDMWTNPL 231
>UNIPROTKB|C9JW37 [details] [associations]
symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
14" species:9606 "Homo sapiens" [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
HGNC:HGNC:16889 EMBL:AC009487 EMBL:AC009299 IPI:IPI00915790
ProteinModelPortal:C9JW37 SMR:C9JW37 STRING:C9JW37 PRIDE:C9JW37
Ensembl:ENST00000437630 ArrayExpress:C9JW37 Bgee:C9JW37
Uniprot:C9JW37
Length = 84
Score = 122 (48.0 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 61 KRVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRV 115
++V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V
Sbjct: 29 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSV 84
>UNIPROTKB|B6MUN4 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:7739 "Branchiostoma floridae" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008237 GO:GO:0006351 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0003713 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
EMBL:ABEP02030881 EMBL:ABEP02030882 EMBL:ABEP02030884
ProteinModelPortal:B6MUN4 Uniprot:B6MUN4
Length = 809
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 58/201 (28%), Positives = 87/201 (43%)
Query: 11 ELENNIVSMETPPTNSTADTSASDAIFFYDEGAQT---KFQQEKPWVNDPHYFKRVKISA 67
E ++ VS P + A T+ + F YD +F +E P P F VKI A
Sbjct: 545 EKQDGGVSQIRPNRSRAARTNLNS--FSYDPFKLVPCKRFSEESP---AP--FS-VKIHA 596
Query: 68 LALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVD 127
AL+ + +HA T EV+GL+ G D + A A P T + + D
Sbjct: 597 TALVTIDMHAHIS-TAEVIGLLGGVFHRDPGALEVASAEPCNSLSTGMQCEMDPVS-QTQ 654
Query: 128 YSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQ-FQE---PFLAVVIDPTRT 183
S+ QAG + VGWYHSHP + S D+ TQ Q+ F + PF+ ++++P +
Sbjct: 655 ASEALSQAGY--SVVGWYHSHPTFAPNPSVRDIETQTKFQEWFAQGGSPFIGIIVNPYSS 712
Query: 184 VSAGKVEIGAFRTYPEGYKPP 204
+ T + PP
Sbjct: 713 TRISPLSRVTCLTISSEWNPP 733
>UNIPROTKB|Q5ZLE6 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9031 "Gallus gallus" [GO:0006413 "translational
initiation" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:AJ719788 IPI:IPI00592172
RefSeq:NP_001026122.1 UniGene:Gga.4721 STRING:Q5ZLE6 PRIDE:Q5ZLE6
Ensembl:ENSGALT00000025971 GeneID:420288 KEGG:gga:420288
InParanoid:Q5ZLE6 NextBio:20823227 Uniprot:Q5ZLE6
Length = 348
Score = 136 (52.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 61/279 (21%), Positives = 127/279 (45%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+V+I L +LK++ H + G G V G++ G D + + + F P + TE +A
Sbjct: 33 KQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTED--DAD 89
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG +++ + +Q Q E + ++
Sbjct: 90 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 148
Query: 179 DPTRTVSAGKVEIGAFRTYP---EGYKPPD---EPISEYQTIPLNKIEDFGVHCKQYYSL 232
DP +T G + + A+R P E K D E + + N E+ + K Y +
Sbjct: 149 DPIKTAQ-GSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLI 207
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNG-DYVAGQISDLAEKLEQAENQLSH- 290
++ ++ + D ++ + +L+SS LG + ++ ++++ + + L +
Sbjct: 208 NVMLWELEKKSAVAD----RHELLSLASSNHLGKSLQLLMDRVDEMSQDIVKYNTYLRNV 263
Query: 291 SRYGPLIAPPPRRKEQEDSQLAKITRDSAKITVEQVHGL 329
S+ +R++QE+ Q + +R A + E ++ L
Sbjct: 264 SKQQQQKHQYQQRRQQENLQ--RQSRGEAPLPEEDINKL 300
>UNIPROTKB|Q4VA72 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 EMBL:CR760965 EMBL:BC096514
RefSeq:NP_001016457.1 UniGene:Str.51157 ProteinModelPortal:Q4VA72
STRING:Q4VA72 GeneID:549211 KEGG:xtr:549211 Xenbase:XB-GENE-5812885
Uniprot:Q4VA72
Length = 261
Score = 129 (50.5 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
V I A L V H+ S EVMGL G+ D ++ + + + + + +
Sbjct: 6 VHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKVVHIHSVIILRRSDKRKDRVEISPE 65
Query: 123 EYMVDYSQTNKQA---GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVID 179
+ ++ ++ A GR VGWYHSHP W S +DV TQ + Q F+ ++
Sbjct: 66 QLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFS 125
Query: 180 ---PTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTI--PLNKI 219
+ G++ F++ + K SEY+ I PL+ +
Sbjct: 126 CFIEDKNTKTGRILYTCFQSV-QAQKS-----SEYERIEVPLHVV 164
>UNIPROTKB|B5RI54 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8030 "Salmo salar" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 HAMAP:MF_03007
EMBL:BT043978 UniGene:Ssa.31091 Uniprot:B5RI54
Length = 344
Score = 131 (51.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 62/276 (22%), Positives = 124/276 (44%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+++I L +LKM+ H + G G+ V G++ G D + + + F P + TE +A
Sbjct: 29 KQIQIEGLVVLKMIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 85
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG ++S + +Q Q E + ++
Sbjct: 86 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVSRALLDSQFSYQHAIEESVVLIY 144
Query: 179 DPTRTVSAGKVEIGAFRTYP---EGYKPPD---EPISEYQTIPLNKIEDFGVHCKQYYSL 232
DP +T G + + A+R P E K D E + + + E+ + K + +
Sbjct: 145 DPIKTAQ-GSLSLKAYRLTPKLMEICKEKDFSAEGLKKAMIGFEHMFEEVPIVIKNSHLI 203
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNG-DYVAGQISDLAEKLEQAENQLSH- 290
++ ++ C + D K+ + LSSS L + ++ D+++ + + +
Sbjct: 204 NVLMWELEEKCTVAD----KHELLNLSSSNHLEKSLQLLMDRVDDMSQDIVKYNTYSRNL 259
Query: 291 SRYGPLIAPPPRRKEQEDSQLAKITRDSAKITVEQV 326
S+ +R++QE++Q + TR + E V
Sbjct: 260 SKQQQQKHQYTQRRQQENAQ--RQTRGETPLPEEDV 293
>UNIPROTKB|B5FY35 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:59729 "Taeniopygia guttata" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:DQ213760 RefSeq:NP_001232560.1
UniGene:Tgu.10677 STRING:B5FY35 PRIDE:B5FY35 GeneID:100190645
KEGG:tgu:100190645 Uniprot:B5FY35
Length = 348
Score = 131 (51.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 60/279 (21%), Positives = 126/279 (45%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+V+I L +LK++ H + G G V G++ G D + + + F P + TE +A
Sbjct: 33 KQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTED--DAD 89
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG +++ + +Q Q E + ++
Sbjct: 90 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 148
Query: 179 DPTRTVSAGKVEIGAFRTYP---EGYKPPD---EPISEYQTIPLNKIEDFGVHCKQYYSL 232
DP +T G + + A+R P E K D E + + N E+ + K Y +
Sbjct: 149 DPIKTAQ-GSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLI 207
Query: 233 DITYFKSSLDCHLLDLLWNKYWVNTLSSSPLLGNG-DYVAGQISDLAEKLEQAENQLSH- 290
++ ++ + D ++ + +L+SS LG + ++ ++++ + + L +
Sbjct: 208 NVMLWELEKKSAVAD----RHELLSLASSNHLGKSLQLLMDRVDEMSQDIVKYNTYLRNV 263
Query: 291 SRYGPLIAPPPRRKEQEDSQLAKITRDSAKITVEQVHGL 329
S+ +R++QE+ Q + +R + E ++ L
Sbjct: 264 SKQQQQKHQYQQRRQQENIQ--RQSRGEPPLPEEDINKL 300
>UNIPROTKB|B5X8M4 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8030 "Salmo salar" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 GO:GO:0070537 MEROPS:M67.004 CTD:79184
EMBL:BT047393 RefSeq:NP_001134356.1 UniGene:Ssa.10060
ProteinModelPortal:B5X8M4 GeneID:100195855 Uniprot:B5X8M4
Length = 260
Score = 128 (50.1 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 36/140 (25%), Positives = 62/140 (44%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
V + + A L + HA S EVMGL G+ D + I+ + + + + + +
Sbjct: 6 VHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNRIVHIHSVIILRRSDKRKDRVEISPE 65
Query: 123 EYMVDYSQTNKQA---GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVID 179
+ ++ + A GR VGWYHSHP W S +DV TQ + Q + F+ ++
Sbjct: 66 QLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFS 125
Query: 180 ---PTRTVSAGKVEIGAFRT 196
+ G+V F++
Sbjct: 126 CFIEDKNTKTGRVLYTCFQS 145
>UNIPROTKB|O15372 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9606 "Homo sapiens" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006413 "translational initiation"
evidence=IC;IDA;TAS] [GO:0006446 "regulation of translational
initiation" evidence=TAS] [GO:0003743 "translation initiation
factor activity" evidence=IC;IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0006413 GO:GO:0006446 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 HOVERGEN:HBG000883 KO:K03247
OrthoDB:EOG4SJ5FF HAMAP:MF_03007 Reactome:REACT_1762 CTD:8667
EMBL:U54559 EMBL:AF092576 EMBL:AF092569 EMBL:AF092570 EMBL:AF092571
EMBL:AF092572 EMBL:AF092573 EMBL:AF092574 EMBL:AF092575
EMBL:BC000386 IPI:IPI00977658 RefSeq:NP_003747.1 UniGene:Hs.492599
ProteinModelPortal:O15372 SMR:O15372 DIP:DIP-33689N IntAct:O15372
MINT:MINT-5000446 STRING:O15372 PhosphoSite:O15372 PaxDb:O15372
PRIDE:O15372 DNASU:8667 Ensembl:ENST00000521861 GeneID:8667
KEGG:hsa:8667 UCSC:uc003yoa.3 GeneCards:GC08M117727 HGNC:HGNC:3273
HPA:HPA023117 HPA:HPA023553 MIM:603912 neXtProt:NX_O15372
PharmGKB:PA162384854 InParanoid:O15372 PhylomeDB:O15372
ChiTaRS:EIF3H GenomeRNAi:8667 NextBio:32511 ArrayExpress:O15372
Bgee:O15372 CleanEx:HS_EIF3H Genevestigator:O15372
GermOnline:ENSG00000147677 Uniprot:O15372
Length = 352
Score = 129 (50.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 24 TNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARS-G-G 81
T STA +S+S A GA K + K D K+V+I L +LK++ H + G G
Sbjct: 8 TGSTATSSSSTA------GAAGK-GKGKGGSGDSAV-KQVQIDGLVVLKIIKHYQEEGQG 59
Query: 82 TIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENA 141
T V G++ G D + + + F P + TE +A D +Y ++ ++ +
Sbjct: 60 TEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DADFDEVQYQMEMMRSLRHVNIDHLH 116
Query: 142 VGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPE 199
VGWY S YG +++ + +Q Q E + ++ DP +T G + + A+R P+
Sbjct: 117 VGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQ-GSLSLKAYRLTPK 172
>UNIPROTKB|B3KS98 [details] [associations]
symbol:EIF3S3 "Eukaryotic translation initiation factor 3,
subunit 3 gamma, 40kDa, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 EMBL:CH471060
GO:GO:0003743 HOGENOM:HOG000248787 HOVERGEN:HBG000883 OMA:NCFPFPK
UniGene:Hs.492599 HGNC:HGNC:3273 ChiTaRS:EIF3H EMBL:AP002905
EMBL:AC023520 EMBL:AK093128 IPI:IPI00647650
ProteinModelPortal:B3KS98 SMR:B3KS98 STRING:B3KS98 PRIDE:B3KS98
Ensembl:ENST00000276682 UCSC:uc003yob.3 ArrayExpress:B3KS98
Bgee:B3KS98 Uniprot:B3KS98
Length = 366
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/178 (28%), Positives = 85/178 (47%)
Query: 24 TNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKRVKISALALLKMVVHARS-G-G 81
T STA +S+S A GA K + K D K+V+I L +LK++ H + G G
Sbjct: 22 TGSTATSSSSTA------GAAGK-GKGKGGSGDSAV-KQVQIDGLVVLKIIKHYQEEGQG 73
Query: 82 TIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENA 141
T V G++ G D + + + F P + TE +A D +Y ++ ++ +
Sbjct: 74 TEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DADFDEVQYQMEMMRSLRHVNIDHLH 130
Query: 142 VGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPE 199
VGWY S YG +++ + +Q Q E + ++ DP +T G + + A+R P+
Sbjct: 131 VGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQ-GSLSLKAYRLTPK 186
>UNIPROTKB|Q66GV6 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 EMBL:BC082208 RefSeq:NP_001087827.1 UniGene:Xl.13095
ProteinModelPortal:Q66GV6 GeneID:447688 KEGG:xla:447688
Xenbase:XB-GENE-5812935 Uniprot:Q66GV6
Length = 261
Score = 125 (49.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 42/165 (25%), Positives = 70/165 (42%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAY 122
V I A L V H+ S EVMGL G+ D ++ + + + + + +
Sbjct: 6 VHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQKLVHIHSVIILRRSDKRKDRVEISPE 65
Query: 123 EYMVDYSQTNKQA---GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVID 179
+ + ++ A GR VGWYHSHP W S +DV TQ + Q F+ ++
Sbjct: 66 QLSAATIEADRLADITGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDVGFVGLIFS 125
Query: 180 ---PTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTI--PLNKI 219
+ G++ F++ + K SEY+ I PL+ +
Sbjct: 126 CFIEDKNTKTGRILYTCFQSV-QAQKS-----SEYERIEVPLHVV 164
>UNIPROTKB|Q5PPY6 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8355 "Xenopus laevis" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 KO:K03247
HAMAP:MF_03007 CTD:8667 EMBL:BC087438 RefSeq:NP_001088779.1
UniGene:Xl.7704 GeneID:496043 KEGG:xla:496043
Xenbase:XB-GENE-958120 Uniprot:Q5PPY6
Length = 334
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/141 (27%), Positives = 71/141 (50%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+V+I L +LK++ H + G G+ V G++ G D + + + F P + TE V+
Sbjct: 19 KQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDF- 76
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG ++S + +Q Q E + ++
Sbjct: 77 -DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TFYGTFVSRALLDSQFSYQHAIEESVVLIY 134
Query: 179 DPTRTVSAGKVEIGAFRTYPE 199
DP +T S G + + A+R P+
Sbjct: 135 DPIKT-SQGSLSLKAYRLTPK 154
>TAIR|locus:2016279 [details] [associations]
symbol:BRCC36A "AT1G80210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair" evidence=IMP]
[GO:0006310 "DNA recombination" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 KO:K11864
eggNOG:NOG322509 UniGene:At.33958 UniGene:At.50812 MEROPS:M67.A03
EMBL:AY093768 EMBL:BT002265 IPI:IPI00536421 RefSeq:NP_178138.2
ProteinModelPortal:Q8RW94 SMR:Q8RW94 PRIDE:Q8RW94
EnsemblPlants:AT1G80210.1 GeneID:844361 KEGG:ath:AT1G80210
TAIR:At1g80210 HOGENOM:HOG000005846 InParanoid:Q8RW94 OMA:QEAMHRS
PhylomeDB:Q8RW94 ProtClustDB:CLSN2680823 Genevestigator:Q8RW94
Uniprot:Q8RW94
Length = 406
Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 49/188 (26%), Positives = 81/188 (43%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQG----KTDGDAIIVMDAFALPVEGTETRVN-A 117
V +S L + HA S T E+MGL+ G DG + M A P ++ + +
Sbjct: 6 VNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDRQKDRV 65
Query: 118 QADAYEYMVDYSQTNKQA---GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFL 174
+ + + +Q ++ GR +GWYHSHP S +DV TQ + Q F+
Sbjct: 66 ETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFI 125
Query: 175 AVVID--PTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSL 232
++ G++++ AF++ +G KP P S + NK + + S
Sbjct: 126 GLIFSCFSEDANKVGRIQVIAFQS-SDG-KPNSIPKS-MSLVLANKDSVIDLE-SSFSSS 181
Query: 233 DITYFKSS 240
D Y +SS
Sbjct: 182 DSIYQRSS 189
>UNIPROTKB|Q56JZ5 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9913 "Bos taurus" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:AY911332 EMBL:BC102096 IPI:IPI00714818
RefSeq:NP_001020493.1 UniGene:Bt.16723 STRING:Q56JZ5 PRIDE:Q56JZ5
Ensembl:ENSBTAT00000018645 GeneID:506873 KEGG:bta:506873 CTD:8667
InParanoid:Q56JZ5 NextBio:20867779 Uniprot:Q56JZ5
Length = 352
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/141 (26%), Positives = 70/141 (49%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+V+I L +LK++ H + G GT V G++ G D + + + F P + TE +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 93
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG +++ + +Q Q E + ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 179 DPTRTVSAGKVEIGAFRTYPE 199
DP +T G + + A+R P+
Sbjct: 153 DPIKTAQ-GSLSLKAYRLTPK 172
>MGI|MGI:1915385 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3,
subunit H" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1915385 GO:GO:0006413 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 GeneTree:ENSGT00550000074674
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 CTD:8667 EMBL:BC014755 IPI:IPI00128202
RefSeq:NP_542366.1 UniGene:Mm.289800 ProteinModelPortal:Q91WK2
SMR:Q91WK2 MINT:MINT-4098428 STRING:Q91WK2 PhosphoSite:Q91WK2
PaxDb:Q91WK2 PRIDE:Q91WK2 Ensembl:ENSMUST00000022925 GeneID:68135
KEGG:mmu:68135 InParanoid:Q91WK2 NextBio:326504 Bgee:Q91WK2
Genevestigator:Q91WK2 GermOnline:ENSMUSG00000022312 Uniprot:Q91WK2
Length = 352
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/141 (26%), Positives = 70/141 (49%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+V+I L +LK++ H + G GT V G++ G D + + + F P + TE +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 93
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG +++ + +Q Q E + ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 179 DPTRTVSAGKVEIGAFRTYPE 199
DP +T G + + A+R P+
Sbjct: 153 DPIKTAQ-GSLSLKAYRLTPK 172
>RGD|735178 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3, subunit
H" species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;ISS] [GO:0006413
"translational initiation" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
RGD:735178 GO:GO:0043231 GO:GO:0032403 GO:GO:0006413 GO:GO:0003743
EMBL:CH473950 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:BC060586 IPI:IPI00208038
RefSeq:NP_942046.1 RefSeq:XP_003750149.1 UniGene:Rn.129213
STRING:Q6P9U8 PhosphoSite:Q6P9U8 PRIDE:Q6P9U8
Ensembl:ENSRNOT00000005786 GeneID:100911110 GeneID:299899
KEGG:rno:100911110 KEGG:rno:299899 UCSC:RGD:735178
InParanoid:Q6P9U8 NextBio:645940 Genevestigator:Q6P9U8
Uniprot:Q6P9U8
Length = 352
Score = 126 (49.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/141 (26%), Positives = 70/141 (49%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+V+I L +LK++ H + G GT V G++ G D + + + F P + TE +A
Sbjct: 37 KQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTED--DAD 93
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG +++ + +Q Q E + ++
Sbjct: 94 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVTRALLDSQFSYQHAIEESVVLIY 152
Query: 179 DPTRTVSAGKVEIGAFRTYPE 199
DP +T G + + A+R P+
Sbjct: 153 DPIKTAQ-GSLSLKAYRLTPK 172
>TAIR|locus:2083318 [details] [associations]
symbol:BRCC36B "AT3G06820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002686 GO:GO:0006281 KO:K11864
IPI:IPI00538324 RefSeq:NP_001078118.1 UniGene:At.40457
ProteinModelPortal:F4JC55 SMR:F4JC55 MEROPS:M67.A03 PRIDE:F4JC55
EnsemblPlants:AT3G06820.2 GeneID:819866 KEGG:ath:AT3G06820
Uniprot:F4JC55
Length = 405
Score = 124 (48.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 50/197 (25%), Positives = 84/197 (42%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTD----GDAIIVMDAFALPVEGTETRVN-A 117
V +S L + HA S T E+MGL+ G + G++ M A P ++ + +
Sbjct: 6 VNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDRQKDRV 65
Query: 118 QADAYEYMVDYSQTNKQA---GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFL 174
+ + + +Q ++ GR +GWYHSHP S +DV TQ + Q F+
Sbjct: 66 ETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLDSGFI 125
Query: 175 AVVID--PTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSL 232
++ G++++ AF++ +G KP P S + NK + S
Sbjct: 126 GLIFSCFSEDANKVGRIQVIAFQS-SDG-KPNSIPKS-MSLVLANKDSVIDIESSSSSS- 181
Query: 233 DITYFKSSLDCHLLDLL 249
D Y +SS LD +
Sbjct: 182 DSIYQRSSSSKPELDTI 198
>UNIPROTKB|Q6P381 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 HAMAP:MF_03007
CTD:8667 EMBL:BC064151 RefSeq:NP_989359.1 UniGene:Str.1956
ProteinModelPortal:Q6P381 STRING:Q6P381 GeneID:394989
KEGG:xtr:394989 Xenbase:XB-GENE-958115 InParanoid:Q6P381
OrthoDB:EOG4VQ9PV Uniprot:Q6P381
Length = 335
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 37/141 (26%), Positives = 70/141 (49%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+V+I + +LK++ H + G G+ V G++ G D + + + F P + TE V+
Sbjct: 20 KQVQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDF- 77
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG ++S + +Q Q E + ++
Sbjct: 78 -DEVQYQMEMMRSLRHVNIDHLHVGWYQS-TFYGTFVSRALLDSQFSYQHAIEESVVLIY 135
Query: 179 DPTRTVSAGKVEIGAFRTYPE 199
DP +T G + + A+R P+
Sbjct: 136 DPIKT-GQGSLSLKAYRLTPK 155
>ZFIN|ZDB-GENE-040808-19 [details] [associations]
symbol:eif3ha "eukaryotic translation initiation
factor 3, subunit H, a" species:7955 "Danio rerio" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA;ISS]
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007420 "brain
development" evidence=IMP] [GO:0048882 "lateral line development"
evidence=IMP] [GO:0001944 "vasculature development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040808-19 GO:GO:0007420 GO:GO:0006413 GO:GO:0003743
GO:GO:0001944 GO:GO:0005852 EMBL:BC079514 IPI:IPI00496845
RefSeq:NP_001003763.1 UniGene:Dr.150579 STRING:Q6AXJ2
MEROPS:M67.971 PRIDE:Q6AXJ2 Ensembl:ENSDART00000044634
Ensembl:ENSDART00000110583 GeneID:445306 KEGG:dre:445306 CTD:445306
eggNOG:NOG314046 GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
NextBio:20832051 ArrayExpress:Q6AXJ2 Bgee:Q6AXJ2 GO:GO:0048882
HAMAP:MF_03007 Uniprot:Q6AXJ2
Length = 335
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 55/253 (21%), Positives = 121/253 (47%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K++++ L +LK++ H + G G+ V G++ G D + + + F P + TE V +
Sbjct: 20 KQIQVDGLVVLKIIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDV--E 76
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG ++S + +Q Q E + ++
Sbjct: 77 FDEVQYQMEMMRSLRHVNIDHLHVGWYQS-TYYGSFVSRALLDSQFSYQHAIEESVVLIY 135
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFK 238
DP +T G + + A+R P+ + E ++ L K H + + I + K
Sbjct: 136 DPLKTAQ-GSLCLKAYRLTPKLMEICKE--KDFTPEGLKKAAVAYEH--MFEEVPI-FIK 189
Query: 239 SSLDCHLLD-LLWNKYWVNTLSSSPLLGN---GDYVAGQISDLAEKLEQ-AENQLSHSRY 293
+S HL++ L+W+ +TL+ L N +++ + L ++++ +++ + ++ Y
Sbjct: 190 NS---HLINVLMWDLQEKSTLADKHELLNLSSSNHLEKSLQLLMDRVDDMSQDIVKYNTY 246
Query: 294 GPLIAPPPRRKEQ 306
++ ++K+Q
Sbjct: 247 CRNLSKQQQQKQQ 259
>UNIPROTKB|Q5VVJ2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9606 "Homo sapiens" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0016578 "histone deubiquitination"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 MEROPS:M67.005 CTD:114803 HOVERGEN:HBG079486
OrthoDB:EOG4ZGPBQ EMBL:AB067502 EMBL:AK126835 EMBL:AK292919
EMBL:BX537912 EMBL:CR627323 EMBL:CR749450 EMBL:AL450024
EMBL:AL035411 IPI:IPI00044725 IPI:IPI00740485 IPI:IPI00747702
RefSeq:NP_001078956.1 UniGene:Hs.741265 PDB:2CU7 PDB:2DCE
PDBsum:2CU7 PDBsum:2DCE ProteinModelPortal:Q5VVJ2 SMR:Q5VVJ2
DIP:DIP-58941N STRING:Q5VVJ2 PhosphoSite:Q5VVJ2 DMDM:74756898
PaxDb:Q5VVJ2 PRIDE:Q5VVJ2 DNASU:114803 Ensembl:ENST00000472487
GeneID:114803 KEGG:hsa:114803 UCSC:uc001cza.3 UCSC:uc009wab.2
GeneCards:GC01M059120 H-InvDB:HIX0000634 HGNC:HGNC:29401 MIM:612176
neXtProt:NX_Q5VVJ2 PharmGKB:PA142671301 InParanoid:Q5VVJ2
OMA:ENGLIPW EvolutionaryTrace:Q5VVJ2 GenomeRNAi:114803
NextBio:79254 Bgee:Q5VVJ2 CleanEx:HS_MYSM1 Genevestigator:Q5VVJ2
GermOnline:ENSG00000162601 Uniprot:Q5VVJ2
Length = 828
Score = 114 (45.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+++ ALL M +HA EV+GL+ G+ ++ D ++ + A A P T + + D
Sbjct: 576 QVKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEVDKVVEVCA-AEPCNSLSTGLQCEMD 633
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQE----PFLAV 176
S+T A R + +GWYHSHP + S D+ TQ Q + F+ +
Sbjct: 634 PVS-QTQASET--LAVRGFSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGM 690
Query: 177 VIDP 180
++ P
Sbjct: 691 IVSP 694
Score = 57 (25.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 9 TWELENNIVSMETPPTNSTADTSASDAIFFYDEG-AQTKFQQEKPWVNDPHYFKRVKISA 67
+W EN ++ T S + + + + +E K Q EK W++ K+ S
Sbjct: 41 SWRTENGLIPWTLDNTISEENRAVIEKMLLEEEYYLSKKSQPEKVWLDQKEDDKKYMKSL 100
Query: 68 LALLKMVVHA 77
K++VH+
Sbjct: 101 QKTAKIMVHS 110
>ZFIN|ZDB-GENE-051030-42 [details] [associations]
symbol:eif3hb "eukaryotic translation initiation
factor 3, subunit H, b" species:7955 "Danio rerio" [GO:0006413
"translational initiation" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=IEA;ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-051030-42 GO:GO:0007420 GO:GO:0007507 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF HAMAP:MF_03007
EMBL:BC086809 EMBL:BC107824 IPI:IPI00655366 RefSeq:NP_001030341.1
UniGene:Dr.86151 STRING:Q5PR67 PRIDE:Q5PR67 GeneID:567151
KEGG:dre:567151 CTD:567151 NextBio:20888545 Uniprot:Q5PR67
Length = 333
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 62/264 (23%), Positives = 123/264 (46%)
Query: 61 KRVKISALALLKMVVHARS-G-GTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQ 118
K+++I L ++K++ H + G G+ V G++ G D + + + F P + TE +A
Sbjct: 18 KQIQIEGLVVMKIIKHYQEEGQGSEVVQGVLLGLVVEDQLEITNCFPFP-QHTED--DAD 74
Query: 119 ADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVI 178
D +Y ++ ++ + VGWY S YG ++S + +Q Q E + ++
Sbjct: 75 FDEVQYQMEMMRSLRHVNIDHLHVGWYQSTL-YGSFVSRALLDSQFSYQHAIEESVVLIY 133
Query: 179 DPTRTVSAGKVEIGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFK 238
DP +T G + + A+R P+ + E ++ + L K H + + I K
Sbjct: 134 DPIKTAQ-GSLCLKAYRLTPKLMEICKE--KDFSSEGLKKASVGYEH--MFEEVPIV-IK 187
Query: 239 SSLDCHLLD-LLW---------NKYWVNTLSSSPLLGNG-DYVAGQISDLAEKLEQAEN- 286
+S HL++ LLW +K+ + +LSSS L + ++ D+++ + + N
Sbjct: 188 NS---HLINVLLWELEEKSTAADKHELLSLSSSSHLEKSLQMLMDRVDDMSQDIVKYNNY 244
Query: 287 QLSHSRYGPLIAPPPRRKEQEDSQ 310
S S+ +R++QE++Q
Sbjct: 245 SRSLSKQQQQKHQYVQRRQQENAQ 268
>UNIPROTKB|G4NCJ9 [details] [associations]
symbol:MGG_01059 "26S proteasome regulatory subunit rpn-8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CM001235 GO:GO:0000502 InterPro:IPR024969 Pfam:PF13012
KO:K03038 RefSeq:XP_003717880.1 ProteinModelPortal:G4NCJ9
SMR:G4NCJ9 EnsemblFungi:MGG_01059T0 GeneID:2674847
KEGG:mgr:MGG_01059 Uniprot:G4NCJ9
Length = 357
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 33/124 (26%), Positives = 59/124 (47%)
Query: 61 KRVKISALALLKMVVH-----ARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRV 115
+ V ++ L LL +V H A V+G++ G+ DG + V ++FA+P E E
Sbjct: 14 RNVSVAPLVLLSVVDHYNRESANQTKNKRVVGVLLGQNDGKNVRVSNSFAVPFEEDEKNP 73
Query: 116 NAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLA 175
+ + Y+ + K+ E +GWYHS P S ++++ ++ + P L
Sbjct: 74 SVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRA--SDLEIN-ELFKRYTPNPLL- 129
Query: 176 VVID 179
V+ID
Sbjct: 130 VIID 133
>POMBASE|SPCC1682.10 [details] [associations]
symbol:rpn8 "19S proteasome regulatory subunit Rpn8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPCC1682.10 GO:GO:0005829 GO:GO:0007346
GO:GO:0005635 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0008541 eggNOG:COG1310 GO:GO:0004843 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 MEROPS:M67.973
PIR:T41067 RefSeq:NP_587803.1 ProteinModelPortal:O74440 SMR:O74440
IntAct:O74440 STRING:O74440 PRIDE:O74440 EnsemblFungi:SPCC1682.10.1
GeneID:2538912 KEGG:spo:SPCC1682.10 OMA:KKINANE OrthoDB:EOG4QC4FM
NextBio:20800090 Uniprot:O74440
Length = 324
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 35/122 (28%), Positives = 63/122 (51%)
Query: 61 KRVKISALALLKMV-VHARSG-GTIE-VMGLMQGKTDGDAIIVMDAFALPVEGTETRVNA 117
++V + L LL V + RS GT V+G++ G+ +GD + V +++A+P E E +
Sbjct: 15 QQVIVHPLVLLSAVDSYNRSAKGTKRRVVGILLGQNNGDVVNVANSYAIPFEEDEKNASV 74
Query: 118 QADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVV 177
+ +M ++ K+ E VGWYH+ P S ++++ +L + P L V+
Sbjct: 75 WFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRP--SDLEINN-LLKKYIPNPVL-VI 130
Query: 178 ID 179
ID
Sbjct: 131 ID 132
>UNIPROTKB|A0JMR6 [details] [associations]
symbol:mysm1 "Histone H2A deubiquitinase MYSM1"
species:8355 "Xenopus laevis" [GO:0003713 "transcription
coactivator activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0016578 "histone deubiquitination" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0006508 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 KO:K11865 MEROPS:M67.005 CTD:114803
EMBL:BC125979 RefSeq:NP_001090503.1 UniGene:Xl.3062
ProteinModelPortal:A0JMR6 SMR:A0JMR6 GeneID:779416 KEGG:xla:779416
Xenbase:XB-GENE-1032962 Uniprot:A0JMR6
Length = 818
Score = 121 (47.7 bits), Expect = 0.00043, P = 0.00043
Identities = 37/125 (29%), Positives = 63/125 (50%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+S A+L + +HA EV+GL+ G+ T+ ++++ + A P T + + D
Sbjct: 547 QVKVSCEAMLVLDLHAHVS-MAEVIGLLGGRYTESESVVEICAVE-PCNSLSTGLQCEMD 604
Query: 121 AYEYMVDYSQTNKQ-AGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQE----PFLA 175
V +Q ++ A R + +GWYHSHP + S D+ TQ Q + FL
Sbjct: 605 P----VSQTQASEALASRGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQNYFSRGGAKFLG 660
Query: 176 VVIDP 180
++I P
Sbjct: 661 MIISP 665
>DICTYBASE|DDB_G0277927 [details] [associations]
symbol:mybH "SWIRM domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 dictyBase:DDB_G0277927 GO:GO:0005634
GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000023 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
PROSITE:PS51294 eggNOG:NOG329351 HSSP:Q5VVJ2 RefSeq:XP_642011.1
ProteinModelPortal:Q54Z40 MEROPS:M67.A12 EnsemblProtists:DDB0220617
GeneID:8621224 KEGG:ddi:DDB_G0277927 KO:K11865 OMA:PIQQSPI
Uniprot:Q54Z40
Length = 1217
Score = 122 (48.0 bits), Expect = 0.00054, P = 0.00053
Identities = 70/291 (24%), Positives = 123/291 (42%)
Query: 14 NNIVSMETPPTNSTADTSASDAIF-FYDEGAQTKFQQ----EKPWVNDPHYFK-RVKISA 67
NN+ + +T ++S++ T+ S ++ F D + F E N+P+ + +S+
Sbjct: 725 NNVNNSKT--SSSSSPTNESSKLYNFEDFSSFPSFDPFTLVECKKYNNPNEQPFTIDVSS 782
Query: 68 LALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVD 127
++ M +H+ T EV+G++ GK + D + A+P + + D +
Sbjct: 783 NTMIVMDIHSHISST-EVIGMLGGKFNPDTNHITILLAIPCNSISSDIQCDMDPNSQIAA 841
Query: 128 YSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAG 187
N G + VGWYHSHP + S D+ TQ FQ F A + +
Sbjct: 842 KEMVNS-IGL--DIVGWYHSHPNFEPIPSLRDIETQT---SFQNLF-ATSSNNNNNNNKS 894
Query: 188 KVE--IGAFRTYPEGYKPPDEPISEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDCHL 245
+E IG F P +K + IS + I + K D + Y L +Y S + +L
Sbjct: 895 MIEPFIG-FIVNPY-HK--NGLISNFNCITITKQMDETNQYRIPYQLSTSYTPSLNNQYL 950
Query: 246 ---LDLLWNKY--WVNTLSSSPLLGNGDY--VAGQISDLAEKLEQAENQLS 289
+D L+ KY + + + + NG + + IS ++ L N S
Sbjct: 951 YQQIDNLFEKYKSYSSRIDLKKTMENGGFTHLDKMISSISSNLILNNNSSS 1001
>UNIPROTKB|F1NJR7 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000555
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF01398 Pfam:PF04433 PROSITE:PS50934
SMART:SM00232 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GeneTree:ENSGT00530000063766 EMBL:AADN02012509
IPI:IPI00573219 Ensembl:ENSGALT00000017668 ArrayExpress:F1NJR7
Uniprot:F1NJR7
Length = 829
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+S+ ALL M +H+ EV+GL+ G+ ++ D ++ + A A P T + + D
Sbjct: 576 QVKVSSEALLIMDLHSHVS-MAEVIGLLGGRYSEADKVVEVCA-AEPCNSLSTGLQCEMD 633
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEP----FLAV 176
S+T A R + +GWYHSHP + S D+ TQ Q + F+ +
Sbjct: 634 PVS-QTQASET--LAARGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIGM 690
Query: 177 VIDP 180
++ P
Sbjct: 691 IVSP 694
>UNIPROTKB|F1NCM9 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0016578 "histone deubiquitination"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008237 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0003713 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
GeneTree:ENSGT00530000063766 IPI:IPI00820738 OMA:ENGLIPW
EMBL:AADN02012509 Ensembl:ENSGALT00000038040 ArrayExpress:F1NCM9
Uniprot:F1NCM9
Length = 832
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+S+ ALL M +H+ EV+GL+ G+ ++ D ++ + A A P T + + D
Sbjct: 578 QVKVSSEALLIMDLHSHVS-MAEVIGLLGGRYSEADKVVEVCA-AEPCNSLSTGLQCEMD 635
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEP----FLAV 176
S+T A R + +GWYHSHP + S D+ TQ Q + F+ +
Sbjct: 636 PVS-QTQASET--LAARGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIGM 692
Query: 177 VIDP 180
++ P
Sbjct: 693 IVSP 696
>UNIPROTKB|Q5F3F2 [details] [associations]
symbol:MYSM1 "Histone H2A deubiquitinase MYSM1"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0016578 "histone deubiquitination"
evidence=ISS] [GO:0003713 "transcription coactivator activity"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] InterPro:IPR000555 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398
Pfam:PF04433 PROSITE:PS50934 SMART:SM00232 SMART:SM00717
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 eggNOG:NOG329351
KO:K11865 EMBL:AJ851698 IPI:IPI00820738 RefSeq:NP_001012945.1
UniGene:Gga.6922 ProteinModelPortal:Q5F3F2 SMR:Q5F3F2
MEROPS:M67.005 GeneID:424671 KEGG:gga:424671 CTD:114803
HOGENOM:HOG000113713 HOVERGEN:HBG079486 InParanoid:Q5F3F2
OrthoDB:EOG4ZGPBQ NextBio:20826977 Uniprot:Q5F3F2
Length = 832
Score = 120 (47.3 bits), Expect = 0.00056, P = 0.00056
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+S+ ALL M +H+ EV+GL+ G+ ++ D ++ + A A P T + + D
Sbjct: 578 QVKVSSEALLIMDLHSHVS-MAEVIGLLGGRYSEADKVVEVCA-AEPCNSLSTGLQCEMD 635
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEP----FLAV 176
S+T A R + +GWYHSHP + S D+ TQ Q + F+ +
Sbjct: 636 PVS-QTQASET--LAARGYSVIGWYHSHPAFDPNPSIRDIDTQAKYQSYFSRGGAMFIGM 692
Query: 177 VIDP 180
++ P
Sbjct: 693 IVSP 696
>UNIPROTKB|Q5R9L6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 HOGENOM:HOG000007866 EMBL:CR859371 RefSeq:NP_001125907.1
UniGene:Pab.3487 ProteinModelPortal:Q5R9L6 PRIDE:Q5R9L6
GeneID:100172840 KEGG:pon:100172840 Uniprot:Q5R9L6
Length = 247
Score = 103 (41.3 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVID---PTRTVSAGKVEIG 192
GR VGWYHSHP W S +DV TQ + Q + F+ ++ + G+V
Sbjct: 112 GRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYT 171
Query: 193 AFRT 196
F++
Sbjct: 172 CFQS 175
Score = 47 (21.6 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDA-FALPVEGTETRVNAQ-AD 120
V + + A L + HA S EVMGL G+ + D D+ FA GTE R A+ D
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGELNDDTR--SDSKFAYT--GTEMRTVAEKVD 67
Query: 121 A 121
A
Sbjct: 68 A 68
>RGD|1588543 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase
complex" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO;ISS]
[GO:0010165 "response to X-ray" evidence=IEA;ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA;ISO] [GO:0031572 "G2 DNA
damage checkpoint" evidence=ISO;ISS] [GO:0031593 "polyubiquitin
binding" evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISO;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO;ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO;ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO;ISS] [GO:0070552 "BRISC complex" evidence=ISO;ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1588543
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 EMBL:CH474092 EMBL:BC166833
IPI:IPI00197234 RefSeq:NP_001120772.1 UniGene:Rn.52727
ProteinModelPortal:B2RYM5 PRIDE:B2RYM5 GeneID:316794
KEGG:rno:316794 NextBio:671241 Genevestigator:B2RYM5 Uniprot:B2RYM5
Length = 291
Score = 103 (41.3 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 136 GRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVID---PTRTVSAGKVEIG 192
GR VGWYHSHP W S +DV TQ + Q + F+ ++ + G+V
Sbjct: 112 GRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYT 171
Query: 193 AFRT 196
F++
Sbjct: 172 CFQS 175
Score = 43 (20.2 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 63 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGD 96
V + + A L + HA S EVMGL G+ + D
Sbjct: 12 VHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
Score = 39 (18.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 294 GPLIAPPPRRKEQEDSQLAKITRDSAKITVE 324
GPL+ R EQ L ++ R+ ++ E
Sbjct: 256 GPLLQWLEDRLEQNQQHLRELQREKEELMAE 286
>MGI|MGI:2444584 [details] [associations]
symbol:Mysm1 "myb-like, SWIRM and MPN domains 1"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016578
"histone deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042393 "histone binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 MGI:MGI:2444584
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
PROSITE:PS51293 GO:GO:0042393 InterPro:IPR017930 GO:GO:0016585
GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 EMBL:AL732611
eggNOG:NOG329351 GeneTree:ENSGT00530000063766 KO:K11865 CTD:114803
HOGENOM:HOG000113713 HOVERGEN:HBG079486 OrthoDB:EOG4ZGPBQ
OMA:ENGLIPW EMBL:AK043802 EMBL:AK081684 EMBL:AK164103 EMBL:BC150946
EMBL:BC151172 EMBL:AK173300 IPI:IPI00225524 IPI:IPI00660704
RefSeq:NP_796213.2 UniGene:Mm.208868 UniGene:Mm.468748
ProteinModelPortal:Q69Z66 SMR:Q69Z66 PhosphoSite:Q69Z66
PRIDE:Q69Z66 Ensembl:ENSMUST00000075872 GeneID:320713
KEGG:mmu:320713 UCSC:uc008tsn.1 UCSC:uc008tso.1 InParanoid:Q69Z66
NextBio:397281 Bgee:Q69Z66 CleanEx:MM_MYSM1 Genevestigator:Q69Z66
GermOnline:ENSMUSG00000062627 Uniprot:Q69Z66
Length = 819
Score = 119 (46.9 bits), Expect = 0.00071, P = 0.00071
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK++A ALL M +HA EV+GL+ G+ ++ D ++ + A A P T + + D
Sbjct: 567 QVKVAAEALLIMNLHAHVS-MAEVIGLLGGRYSEADKVLEVCA-AEPCNSLSTGLQCEMD 624
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQE----PFLAV 176
S+T G + +GWYHSHP + S D+ TQ Q + F+ +
Sbjct: 625 PVS-QTQASETLALRGY--SVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGM 681
Query: 177 VIDP 180
++ P
Sbjct: 682 IVSP 685
>UNIPROTKB|E1B741 [details] [associations]
symbol:MYSM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000555 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF01398 Pfam:PF04433
PROSITE:PS50934 SMART:SM00232 SMART:SM00717 GO:GO:0045893
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008237
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003713
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016585 GO:GO:0016578
GO:GO:0004843 GO:GO:0004221 GeneTree:ENSGT00530000063766 KO:K11865
CTD:114803 OMA:ENGLIPW EMBL:DAAA02008758 EMBL:DAAA02008759
IPI:IPI00712636 RefSeq:NP_001179337.1 UniGene:Bt.32576 PRIDE:E1B741
Ensembl:ENSBTAT00000033324 GeneID:515332 KEGG:bta:515332
NextBio:20871773 Uniprot:E1B741
Length = 831
Score = 119 (46.9 bits), Expect = 0.00072, P = 0.00072
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 62 RVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQAD 120
+VK+++ ALL M +HA EV+GL+ G+ ++ D I+ + A A P T + + D
Sbjct: 576 QVKVASEALLIMDLHAHVS-MAEVIGLLGGRYSEADKIVEVCA-AEPCNSLSTGLQCEMD 633
Query: 121 AYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQE----PFLAV 176
S+T A R + +GWYHSHP + S D+ TQ Q + F+ +
Sbjct: 634 PVS-QTQASET--LAVRGYSVIGWYHSHPAFDPNPSLRDIDTQAKYQSYFSRGGAKFIGM 690
Query: 177 VIDP 180
++ P
Sbjct: 691 IVSP 694
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 361 361 0.00082 117 3 11 23 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 70
No. of states in DFA: 610 (65 KB)
Total size of DFA: 249 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.96u 0.11s 30.07t Elapsed: 00:00:02
Total cpu time: 29.97u 0.11s 30.08t Elapsed: 00:00:02
Start: Fri May 10 17:10:18 2013 End: Fri May 10 17:10:20 2013