BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018088
(361 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O06995|PGMB_BACSU Beta-phosphoglucomutase OS=Bacillus subtilis (strain 168) GN=yvdM
PE=1 SV=1
Length = 226
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+IF D V+ DT AWK +A E +IP + D+ ++ + L +L++G
Sbjct: 3 AVIFDLDGVITDTAEYHFLAWKHIA--EQIDIPFDRDMNERLKGISREESLESILIFGGA 60
Query: 180 ESELDRLNSRLTQLY------YDNLLSVTEP---MEGLQEWLDAVSSARIPCAVVSGLDR 230
E++ N+ +L Y L+S P + G+ L + + I + S
Sbjct: 61 ETKY--TNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASS--S 116
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHR--FLSAAVKLDRKPSKCVVFEDDPRAIT 288
R + L R+ ++ F AIV + FL+AA LD P+ C ED I+
Sbjct: 117 RNAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGIS 176
Query: 289 AAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSV 324
A + M AVG+ + ++ ADL V ++L++
Sbjct: 177 AIKSAGMFAVGV---GQGQPMLGADLVVRQTSDLTL 209
>sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=TM_1254 PE=1 SV=1
Length = 216
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 13/195 (6%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
+IF D V+ DT L A++++A GK P D+ R+I+ L ++ +
Sbjct: 3 AVIFDMDGVLMDTEPLYFEAYRRVAESYGK--PYTEDLHRRIMGVPEREGLPILMEALEI 60
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
+ L+ R+ + + + G++E L+ V S RI A+ + +R+ +E L R
Sbjct: 61 KDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRR 120
Query: 240 MGLLKYFQAIV--SEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297
+ L KYF +V + + +L +L+ P K VVFED + AA +
Sbjct: 121 LDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSA---- 176
Query: 298 VGLIGAHRAYDLVQA 312
G R Y +V +
Sbjct: 177 ----GIERIYGVVHS 187
>sp|P77366|PGMB_ECOLI Beta-phosphoglucomutase OS=Escherichia coli (strain K12) GN=ycjU
PE=1 SV=1
Length = 219
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEI-PQEGDVLRQILNAGADHVLHKVLLWGK 178
G+IF D V+ DT L AW+Q+A E G I Q + L+ I D L ++L G
Sbjct: 5 GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGI---SRDESLRRILQHGG 61
Query: 179 EESELD-----RLNSRLTQLYYDNL--LSVTEPMEGLQEWLDAVSSARIPCAVVS-GLDR 230
+E + + +L R LY +L L+V + G++ L + + +I + S L+
Sbjct: 62 KEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLNA 121
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290
++ ALE F A S+ + FL+A L P C+ ED I A
Sbjct: 122 PTILAALELREFFT-FCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAI 180
Query: 291 HNCTMMAVGLIGA 303
+ M +VG IGA
Sbjct: 181 NASGMRSVG-IGA 192
>sp|P44004|Y488_HAEIN Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1
Length = 200
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
GLIF D + DT + AW + GK+ E D GA +
Sbjct: 12 GLIFDMDGTLIDTMPVHAQAWTMV----GKKFGYEFDFQIMYNFGGATVRTIAGEMMKAA 67
Query: 180 ESELDRLNSRLT---QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA 236
LDR+ L +L Y L+ + E + + + P A+ SG R+ +
Sbjct: 68 NMPLDRIEDVLAAKRELSY-QLIPTQSKLLPTFEIVKSFHQKK-PIALGSGSHRKIIDML 125
Query: 237 LERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294
++++ + YF AIVS +D E H FL A + PS+C+VFED + A +
Sbjct: 126 MDKLAIAPYFNAIVSADDVKEHKPHPETFLRCAELIQANPSRCIVFEDADLGVQAGLSAG 185
Query: 295 M 295
M
Sbjct: 186 M 186
>sp|Q8UEY9|GPH_AGRT5 Phosphoglycolate phosphatase OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=gph PE=3 SV=2
Length = 233
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 180 ESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239
E+++D L R Y + + P G+ E LDA+S A I AV + V LE+
Sbjct: 71 EADIDPLYERFITHYRAEMPGESRPYPGIIETLDALSQAGITLAVCTNKTEILAVPLLEK 130
Query: 240 MGLLKYFQAIVSEEDGM--ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297
+GL +YF AI + + A L K + ++ D I AA N + +
Sbjct: 131 LGLTRYFAAITCGDTFAFRKPDARHILGTIEKAGGDVQRSIMVGDSINDILAARNAAVPS 190
Query: 298 VGLIGAHRAYDLV--QADLAVANFNELSVINLRRLFANKGS 336
+G+ + +V + D+ + +F L+ +L +KG+
Sbjct: 191 IGVTFGYTDVPMVELEPDVVIDDFAALTPALFEKLV-SKGA 230
>sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain
K12) GN=yqaB PE=1 SV=1
Length = 188
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 15/185 (8%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGAD--HVLHKVLLWG 177
GLIF D + DT AW+++ G + D+ I G+ + ++
Sbjct: 7 GLIFDMDGTILDTEPTHRKAWREVLGHYGLQY----DIQAMIALNGSPTWRIAQAIIELN 62
Query: 178 KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSS--ARIPCAVVSGLDRRKMVE 235
+ + + L T+ LL EP+ +D V S R P AV +G +
Sbjct: 63 QADLDPHALAREKTEAVRSMLLDSVEPLP----LVDVVKSWHGRRPMAVGTGSESAIAEA 118
Query: 236 ALERMGLLKYFQAIVSEED--GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293
L +GL YF A+V+ + + FL A ++ +P++CVVFED I AA
Sbjct: 119 LLAHLGLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAA 178
Query: 294 TMMAV 298
M AV
Sbjct: 179 GMDAV 183
>sp|Q65Q22|GPH_MANSM Phosphoglycolate phosphatase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=MS2331 PE=3 SV=1
Length = 224
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 13/175 (7%)
Query: 150 EIPQ--EGDVLRQILNAGADHVLHKVLLWGKEES-------ELDRLNSRLTQLYYDNLLS 200
E+PQ E VL I N GAD ++ + L W KE+S + +L R + Y +NL +
Sbjct: 35 ELPQAPEELVLTWIGN-GADILIGRALDWAKEQSGKSLTDEQTAQLKERFSFYYAENLCN 93
Query: 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED--GMES 258
V+ ++E L+ + AVV+ R + L+ + F + + ++
Sbjct: 94 VSRLYPNVKETLETLKEQGFILAVVTNKPTRHVQPVLKAFAIDHLFSETLGGQSLPAIKP 153
Query: 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQAD 313
K P + + D I AAH+ AVGL + Y++ AD
Sbjct: 154 HPAPLYYLCGKFGLYPHQILFVGDSRNDILAAHSAGCTAVGLTYGYN-YNMPIAD 207
>sp|P71447|PGMB_LACLA Beta-phosphoglucomutase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=pgmB PE=1 SV=2
Length = 221
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 33/199 (16%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEG------------KEIPQEGDVLRQILNAGAD 167
++F D V+ DT AWK LA E G K + +E D L++IL+
Sbjct: 4 AVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSRE-DSLQKILDLADK 62
Query: 168 HVLHKVLLWGKEESEL-DRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVS 226
V +E EL R N ++ D +S + G+ + L + S +I A+ S
Sbjct: 63 KV------SAEEFKELAKRKNDNYVKMIQD--VSPADVYPGILQLLKDLRSNKIKIALAS 114
Query: 227 GLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR-----FLSAAVKLDRKPSKCVVFE 281
+ LE+M L YF AI D E A + F++AA + PS+ + E
Sbjct: 115 ASKNGPFL--LEKMNLTGYFDAIA---DPAEVAASKPAPDIFIAAAHAVGVAPSESIGLE 169
Query: 282 DDPRAITAAHNCTMMAVGL 300
D I A + + +G+
Sbjct: 170 DSQAGIQAIKDSGALPIGV 188
>sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168)
GN=yhcW PE=3 SV=1
Length = 220
Score = 39.3 bits (90), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 13/185 (7%)
Query: 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
LIF +D ++ DT + +++ E G +P V +++ A + L E
Sbjct: 4 ALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPL--SVWGKVIGTAAGFRPFEYL----E 57
Query: 180 ESELDRLN-SRLTQLYYDNLLSVTEPME---GLQEWLDAVSSARIPCAVVSGLDRRKMVE 235
E +LN LTQL + E + G++ +L+A + + S D + +
Sbjct: 58 EQIGKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVSG 117
Query: 236 ALERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293
L+++GL F+ I + +D E + +L AA L P++C+ FED AA
Sbjct: 118 HLKQIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAKRA 177
Query: 294 TMMAV 298
M V
Sbjct: 178 GMKCV 182
>sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1
Length = 234
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 16/130 (12%)
Query: 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYFQAIVSEED--------G 255
M G +E + + R+P A+ + + R G F IV +D G
Sbjct: 97 MPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFHHIVLGDDPEVKNGKPG 156
Query: 256 MESMAHRFLSAAVKLDRKPSK--CVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLV-QA 312
M+ FL+ A + P C+VFED P + AA +C M V + + + DL +A
Sbjct: 157 MDI----FLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSADLTRKA 212
Query: 313 DLAVANFNEL 322
L +++ ++
Sbjct: 213 TLVLSSLHDF 222
>sp|Q32AJ7|GPH_SHIDS Phosphoglycolate phosphatase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=SDY_3694 PE=3 SV=1
Length = 252
Score = 38.1 bits (87), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 87/228 (38%), Gaps = 27/228 (11%)
Query: 121 GLIFSWDVVADTRALKLNAWKQLAFEEGK-EIPQEGDVLRQILNAGADHVLHKVLLWGKE 179
G+ F D AL L A +A K I E V+ I N GAD ++ + L W ++
Sbjct: 9 GVAFDLDGTLVDSALGLAAAVDMALYALKLPIAGEERVITWIGN-GADVLMERALTWARQ 67
Query: 180 E-------------------SELDRLNSRLTQLYYDNLL-SVTEPMEGLQEWLDAVSSAR 219
E E R+ +L YY + T + + L A+ +
Sbjct: 68 ERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKG 127
Query: 220 IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKC 277
+P +V+ + LE + + KYF ++ +D H L A ++ P +
Sbjct: 128 LPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQM 187
Query: 278 VVFEDDPRAITAAHNCTMMAVGLIGAH---RAYDLVQADLAVANFNEL 322
+ D I AA +VGL + A DL Q D+ + N+L
Sbjct: 188 LFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDL 235
>sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila
melanogaster GN=Gs1l PE=2 SV=2
Length = 231
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 205 MEGLQEWLDAVSSARIP-C-AVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR 262
M G + L + + ++P C A SG D ++ A R L F V E + +
Sbjct: 93 MPGAERLLRHLHANKVPFCLATSSGADMVELKTAQHR-ELFSLFNHKVCGSSDKEVVNGK 151
Query: 263 -----FLSAAVK--LDRKPSKCVVFEDDPRAITAAHNCTMMAV 298
FL AA + + KPS C+VFED P +TAA++ M V
Sbjct: 152 PAPDIFLVAAGRFGVPPKPSDCLVFEDSPNGVTAANSAGMQVV 194
>sp|Q8FCW0|GPH_ECOL6 Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=c4155 PE=3 SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADILMERALTWARQERATLRKTMGKPPVDDDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A+ + +P +V+ + LE + + KYF
Sbjct: 96 KLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A ++ P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A DL Q D+ + N+L
Sbjct: 216 YGEAIDLSQPDVIYQSLNDL 235
>sp|P58422|GPH_ECO57 Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph
PE=3 SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALTWARQERATLRKTMGKPPVDDDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A+ + +P +V+ + LE + + KYF
Sbjct: 96 KLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A ++ P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A DL Q D+ + N+L
Sbjct: 216 YGEAIDLSQPDVIYQSINDL 235
>sp|Q83PX1|GPH_SHIFL Phosphoglycolate phosphatase OS=Shigella flexneri GN=SF3403 PE=3
SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALTWARQERATLRKTMGKPPVDDDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A+ + +P +V+ + LE + + KYF
Sbjct: 96 KLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A ++ P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A DL Q D+ + N+L
Sbjct: 216 YGEAIDLSQPDVIYQSINDL 235
>sp|Q31VP9|GPH_SHIBS Phosphoglycolate phosphatase OS=Shigella boydii serotype 4 (strain
Sb227) GN=SBO_3372 PE=3 SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALAWARQERATLRKTMGKPPVDDDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A+ + +P +V+ + LE + + KYF
Sbjct: 96 KLFDRYYSEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A ++ P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A DL Q D+ + N+L
Sbjct: 216 YGEAIDLSQPDVIYQSINDL 235
>sp|P32662|GPH_ECOLI Phosphoglycolate phosphatase OS=Escherichia coli (strain K12)
GN=gph PE=1 SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A+ + +P +V+ + LE + + KYF
Sbjct: 96 KLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A ++ P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A DL Q D+ + N+L
Sbjct: 216 YGEAIDLSQPDVIYQSINDL 235
>sp|Q3YWN8|GPH_SHISS Phosphoglycolate phosphatase OS=Shigella sonnei (strain Ss046)
GN=SSON_3516 PE=3 SV=1
Length = 252
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPIAGEERVITWIGN-GADVLMERALTWARQERATQRKTMGKPPVDDDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A+ + +P +V+ + LE + + KYF
Sbjct: 96 KLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A ++ P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A DL Q D+ + N+L
Sbjct: 216 YGEAIDLSQPDVIYQSINDL 235
>sp|C4L6M4|GPDA_EXISA Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Exiguobacterium sp.
(strain ATCC BAA-1283 / AT1b) GN=gpsA PE=3 SV=1
Length = 341
Score = 36.2 bits (82), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 171 HKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDR 230
H VLL+G+E+ +D +NS T +Y + E + +A+ I VV
Sbjct: 25 HDVLLYGREQEHVDEINSSHTNSFYLKDAPLPESIRATTNLKEALDGRSIVFLVVPSSAI 84
Query: 231 RKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSK 276
R + + L LL IV G+E H LS + + +P+K
Sbjct: 85 RPVSKELNT--LLTEPVTIVHAAKGIEPKTHERLSEIIAEEIEPAK 128
>sp|Q4QMY0|GPH_HAEI8 Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain
86-028NP) GN=NTHI0697 PE=3 SV=1
Length = 224
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 10/153 (6%)
Query: 157 VLRQILNAGADHVLHKVLLWGKE-------ESELDRLNSRLTQLYYDNLLSVTEPMEGLQ 209
VL I N GA ++ + L W K+ E+E+ ++ R Y +NL +V+ ++
Sbjct: 44 VLTWIGN-GAPVLIARALDWAKKQTGKVLTETEVKQVTERFNFYYGENLCNVSRLYPNVK 102
Query: 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED--GMESMAHRFLSAA 267
E L+ + AVV+ R + L G+ F ++ + ++
Sbjct: 103 ETLETLKEKGYVLAVVTNKPTRHVQPVLAAFGIDHLFSEMLGGQSLPAIKPHPAPLYYLC 162
Query: 268 VKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300
K +P + + D I AAH VGL
Sbjct: 163 GKFGFEPRQVLFVGDSKNDIIAAHAAGCAVVGL 195
>sp|Q9JTP5|GPH_NEIMA Phosphoglycolate phosphatase OS=Neisseria meningitidis serogroup A
/ serotype 4A (strain Z2491) GN=gph PE=3 SV=1
Length = 235
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 14/175 (8%)
Query: 152 PQEGDVLRQILNAGADHVLHKVLLWGKE---ESEL-DRLNSRLTQLYYDNLLSVTEPMEG 207
P V+ + G ++H+VL ++ +SEL ++ + Y D+L T P
Sbjct: 41 PLPAKVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPE 100
Query: 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLS-- 265
+ L + S IP AV++ + E L+++GL YF I+ G +S+ + S
Sbjct: 101 TEAGLALLKSLGIPLAVITNKNEILAAELLKQLGLADYFSLIL----GGDSLPEKKPSPL 156
Query: 266 ----AAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV 316
AA L + V+ D I AA ++VG+ + L+ D A
Sbjct: 157 PLRHAAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDAT 211
>sp|P0A8Y1|YJJG_ECOLI Pyrimidine 5'-nucleotidase YjjG OS=Escherichia coli (strain K12)
GN=yjjG PE=1 SV=1
Length = 225
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Query: 177 GKEESELDRLN---SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKM 233
G+ ES +RLN +L + + + + + P+ G L+A+ + +G +
Sbjct: 66 GRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQ 125
Query: 234 VEALERMGLLKYFQ-AIVSEEDGMESMAHRFLSAAVKLDRKP--SKCVVFEDDPRA-ITA 289
V LER GL YF ++SEE G+ + A++ P S+ ++ D + I
Sbjct: 126 VR-LERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILG 184
Query: 290 AHNCTMMAVGLIGAHR 305
N + L HR
Sbjct: 185 GINAGLATCWLNAHHR 200
>sp|P0A8Y2|YJJG_ECO57 Pyrimidine 5'-nucleotidase YjjG OS=Escherichia coli O157:H7 GN=yjjG
PE=3 SV=1
Length = 225
Score = 35.0 bits (79), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Query: 177 GKEESELDRLN---SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKM 233
G+ ES +RLN +L + + + + + P+ G L+A+ + +G +
Sbjct: 66 GRFESWAERLNVEPGKLNEAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQ 125
Query: 234 VEALERMGLLKYFQ-AIVSEEDGMESMAHRFLSAAVKLDRKP--SKCVVFEDDPRA-ITA 289
V LER GL YF ++SEE G+ + A++ P S+ ++ D + I
Sbjct: 126 VR-LERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILG 184
Query: 290 AHNCTMMAVGLIGAHR 305
N + L HR
Sbjct: 185 GINAGLATCWLNAHHR 200
>sp|Q57IZ2|GPH_SALCH Phosphoglycolate phosphatase OS=Salmonella choleraesuis (strain
SC-B67) GN=SCH_3414 PE=3 SV=1
Length = 252
Score = 34.7 bits (78), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W +EE E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALTWAREERATLRKTMGKPPVDEDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A++++ + +V+ + LE + + KYF
Sbjct: 96 KLFDRYYGEVAEEGTFLFPHVADTLGALNASGLSLGLVTNKPTPFVAPLLESLDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A +L P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPEPLLLVASRLGMMPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A L + D+ +FN+L
Sbjct: 216 YGEAIALSEPDVIYDSFNDL 235
>sp|Q5HZL9|HDHD3_XENLA Haloacid dehalogenase-like hydrolase domain-containing protein 3
OS=Xenopus laevis GN=hdhd3 PE=2 SV=1
Length = 244
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 167 DHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPM-EGLQEWLDAVSSARIPCAVV 225
D VL L G E+S D + S QLY D + + G +E LD+ ++ + AV+
Sbjct: 73 DVVLQTFRLSGIEDS--DTVQSLAKQLYQDFSTAHNWALVPGAREALDSCTNLGLRMAVI 130
Query: 226 SGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAH-RFLSAAVKLDRKPSKCVVFEDD 283
S DRR + E L + L +YF +V+ E + H A+ L + P V D
Sbjct: 131 SNFDRR-LEELLRQCCLERYFDFVVTAESAGVAKPHLGIFHKALSLAKVPPHQAVHVGD 188
>sp|Q8ZLK5|GPH_SALTY Phosphoglycolate phosphatase OS=Salmonella typhimurium (strain LT2
/ SGSC1412 / ATCC 700720) GN=gph PE=3 SV=1
Length = 252
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W +EE E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALTWAREERATLRKTMGKPPVDEDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL---SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245
+L YY + +V P + + L A+ ++ + +V+ + LE + + KY
Sbjct: 96 KLFDRYYGEVAEEGTVLFPH--VADTLGALHASGLSLGLVTNKPTPFVAPLLESLDIAKY 153
Query: 246 FQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303
F ++ +D H L A +L P + + D I AA +VGL
Sbjct: 154 FSVVIGGDDVQNKKPHPEPLLLVASRLGMMPEQMLFVGDSRNDIQAAKAAGCPSVGLTYG 213
Query: 304 H---RAYDLVQADLAVANFNEL 322
+ A L + D+ +FN+L
Sbjct: 214 YNYGEAIALSEPDVIYDSFNDL 235
>sp|Q7S055|ATG11_NEUCR Autophagy-related protein 11 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=atg-11 PE=3 SV=1
Length = 1300
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 254 DGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHN 292
DG+E++ HR +L+ + +CVV E + A+T HN
Sbjct: 501 DGLETLIHRTQQLETELNTERERCVVLEREINALTTLHN 539
>sp|P44755|GPH_HAEIN Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=gph PE=3 SV=1
Length = 224
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 12/161 (7%)
Query: 151 IPQ--EGDVLRQILNAGADHVLHKVLLWGKE-------ESELDRLNSRLTQLYYDNLLSV 201
+PQ E VL I N GA ++ + L W K+ E+E+ ++ R Y +NL +V
Sbjct: 36 LPQAPEELVLTWIGN-GAPVLIARALDWAKKQTGKVLTETEVKQVTERFNFYYGENLCNV 94
Query: 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED--GMESM 259
+ ++E L+ + AVV+ R + L G+ F ++ + ++
Sbjct: 95 SRLYPNVKETLEILKEKGYVLAVVTNKPTRHVQPVLAAFGIDHLFSEMLGGQSLPAIKPH 154
Query: 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300
K +P + + D I A H VGL
Sbjct: 155 PAPLYYLCGKFGFEPRQVLFVGDSKNDIIAGHAAGCAVVGL 195
>sp|Q6CZR3|GPH_ERWCT Phosphoglycolate phosphatase OS=Erwinia carotovora subsp.
atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=ECA4088
PE=3 SV=1
Length = 234
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 8/169 (4%)
Query: 162 LNAGADHVLHKVLLWGKEESELDRLNS---RLTQLYYDNLLSVTEPMEGLQEWLDAVSSA 218
+ GAD ++ + L W E R+ R Y + S + ++E L ++
Sbjct: 50 IGNGADVMVERALRWAGVEPTAARVQETRERFDSYYAQTVDSGSTLFLQVKETLAQLAQQ 109
Query: 219 RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAV--KLDRKPSK 276
+P AVV+ + L +G+ YF I+ +D + H V KL + S+
Sbjct: 110 GVPMAVVTNKPTPFVAPLLAGLGIGDYFSLIIGGDDVIVKKPHPAPLYLVLGKLGLRASE 169
Query: 277 CVVFEDDPRAITAAHNCTMMAVGLIGAH---RAYDLVQADLAVANFNEL 322
+ D I AA +VG+ + A +L Q D+ + F ++
Sbjct: 170 LLFVGDSRNDIQAAQAAGCRSVGMTYGYNYGEAIELSQPDVVLDRFADI 218
>sp|Q5PLX6|GPH_SALPA Phosphoglycolate phosphatase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=SPA3347 PE=3 SV=1
Length = 252
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 28/200 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE-------------------SELDRLNS 188
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALTWARQERATLRKTMGKPPVDEDIPAEEQVRILR 95
Query: 189 RLTQLYYDNLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247
+L YY + T + + L A+ ++ + +V+ + LE + + KYF
Sbjct: 96 KLFDRYYGEVAEEGTFLFPHVADTLGALHASGLSLGLVTNKPTPFVAPLLESLDIAKYFS 155
Query: 248 AIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH- 304
++ +D H L A +L P + + D I AA +VGL +
Sbjct: 156 VVIGGDDVQNKKPHPEPLLLVASRLGMTPEQMLFVGDSRNDIQAAKAAGCPSVGLTYGYN 215
Query: 305 --RAYDLVQADLAVANFNEL 322
A L + D+ +FN+L
Sbjct: 216 YGEAIALSEPDVIYDSFNDL 235
>sp|B9DVX9|GPDA_STRU0 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Streptococcus
uberis (strain ATCC BAA-854 / 0140J) GN=gpsA PE=3 SV=1
Length = 338
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 155 GDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDA 214
G L Q+LN H+V LWG + ++D +N + T Y + + E ++ + +A
Sbjct: 15 GTALAQVLNDNG----HQVCLWGDSQEQIDEINQKHTNTRYFKDIVIDEKIKATTDLKEA 70
Query: 215 VSSAR-----IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAV 268
+ A +P V L +++ E L+ ++ + G+E H LS +
Sbjct: 71 LKDANAILFVVPTKVTR-LVAKQVAETLDHKVIMMHAS------KGLEPGTHERLSTVI 122
>sp|Q6PIF6|MYO7B_HUMAN Unconventional myosin-VIIb OS=Homo sapiens GN=MYO7B PE=2 SV=2
Length = 2116
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 70 MQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWDVV 129
++ AIG GFE F + ++ ++F N+ LQ+ F++ + + M+ +E SWD +
Sbjct: 429 VRRAIGLLDIFGFENFENNSFEQLCINFANEHLQQFFVQHV-FTMEQEEYRSENISWDYI 487
Query: 130 --ADTR-ALKLNAWKQLA----FEEGKEIPQEGDV-LRQILNA 164
D R L L A K ++ +E PQ D+ + Q LN+
Sbjct: 488 HYTDNRPTLDLLALKPMSIISLLDEESRFPQGTDLTMLQKLNS 530
>sp|Q9EYY5|GPH_ENTAE Phosphoglycolate phosphatase OS=Enterobacter aerogenes GN=gph PE=3
SV=1
Length = 253
Score = 33.5 bits (75), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 29/201 (14%)
Query: 150 EIPQEGD--VLRQILNAGADHVLHKVLLWGKEE--------------------SELDRLN 187
E+P G+ V+ I N GAD ++ + L W ++E E R+
Sbjct: 37 ELPVAGEERVITWIGN-GADVLMERALTWARQERATLRAAMGKPSVDDHDIPQDEQLRIL 95
Query: 188 SRLTQLYYDNLLSVTEPM-EGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF 246
+L YY + + + L A+ + +P A+++ + L+ + + KYF
Sbjct: 96 RKLFDRYYAEAAEEGSFLFPAVADTLGALHAKGLPLALITNKPTPFVAPLLDALDIAKYF 155
Query: 247 QAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAH 304
++ +D H L A KL P++ + D I AA +VGL +
Sbjct: 156 TVVIGGDDVQNKKPHPEPLLLVAEKLSLAPAELLFVGDSRNDIQAAKAAGCCSVGLTYGY 215
Query: 305 RAYD---LVQADLAVANFNEL 322
+ L + D FNEL
Sbjct: 216 NYGEPLALSEPDYLFDQFNEL 236
>sp|Q7NQ37|Y4303_CHRVO UPF0502 protein CV_4303 OS=Chromobacterium violaceum (strain ATCC
12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 /
NCTC 9757) GN=CV_4303 PE=3 SV=1
Length = 220
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 239 RMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSK-----CVVFEDDPRAITAAHNC 293
R G + F + E + ++A ++ A KL+R+P + C + +P+ I A C
Sbjct: 128 RAGRIYSFSGVDEVETALNALADKYPPLAAKLERQPGEREARWCHLLSGEPQ-ILPAQAC 186
Query: 294 TMMAVGLIG 302
++ VGL G
Sbjct: 187 EVIDVGLTG 195
>sp|Q99MZ6|MYO7B_MOUSE Unconventional myosin-VIIb OS=Mus musculus GN=Myo7b PE=1 SV=3
Length = 2113
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 11/104 (10%)
Query: 70 MQEAIGAEYGEGFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWDVV 129
++ AIG GFE F+ + ++ ++F N+ LQ+ F+K + + M+ +E +W+ +
Sbjct: 429 VRRAIGLLDIFGFENFQNNSFEQLCINFANEHLQQFFVKHV-FTMEQEEYLSENITWNYI 487
Query: 130 A--------DTRALKLNAWKQLAFEEGKEIPQEGDV-LRQILNA 164
D ALK + L EE + PQ DV + Q LN+
Sbjct: 488 HYTDNQPILDMLALKPMSIISLLDEESR-FPQGTDVTMLQKLNS 530
>sp|Q5F7W4|GPH_NEIG1 Phosphoglycolate phosphatase OS=Neisseria gonorrhoeae (strain ATCC
700825 / FA 1090) GN=NGO1052 PE=3 SV=1
Length = 236
Score = 32.3 bits (72), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 19/197 (9%)
Query: 127 DVVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKE---ESEL 183
D V D A +QL + P V+ + G ++H+VL ++ +SEL
Sbjct: 21 DSVPDLAAAAEAMLEQLGMK-----PLPAKVVESYVGDGIGKLVHRVLTNDRDREADSEL 75
Query: 184 -DRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGL 242
++ + Y D+L T P + L + S IP +++ + E L+++GL
Sbjct: 76 WEKGFVSYMKYYRDHLSVFTRPYPETEAGLALLKSLGIPLVIITNKNEILAAELLKQLGL 135
Query: 243 LKYFQAIVSEEDGMESMAHRFLS------AAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296
YF I+ G +S+ + S AA L + ++ D I AA +
Sbjct: 136 ADYFSLIL----GGDSLPEKKPSPLPLRHAAEVLGIDAANMLMVGDSRNDIIAAKAAGCL 191
Query: 297 AVGLIGAHRAYDLVQAD 313
+VG+ + L+ D
Sbjct: 192 SVGVTFGYGDMTLLSQD 208
>sp|A4VY17|GPDA_STRSY Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Streptococcus suis
(strain 05ZYH33) GN=gpsA PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 155 GDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEG---LQEW 211
G L Q+LN H V +WG ++D +N T Y + + E ++G L E
Sbjct: 15 GTALGQVLNDNG----HTVRIWGNVPEQIDEINKEHTNKRYFKDVILDENIKGYKDLSEA 70
Query: 212 LDAVSSA--RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLS 265
LD V + +P V L +++ +A LK+ ++ G+E +H+ LS
Sbjct: 71 LDGVDAVLFVVPTKVTR-LVAKQVAQA------LKHKVVVMHASKGLEPDSHKRLS 119
>sp|A4W4A9|GPDA_STRS2 Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Streptococcus suis
(strain 98HAH33) GN=gpsA PE=3 SV=1
Length = 338
Score = 32.0 bits (71), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 155 GDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEG---LQEW 211
G L Q+LN H V +WG ++D +N T Y + + E ++G L E
Sbjct: 15 GTALGQVLNDNG----HTVRIWGNVPEQIDEINKEHTNKRYFKDVILDENIKGYKDLSEA 70
Query: 212 LDAVSSA--RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLS 265
LD V + +P V L +++ +A LK+ ++ G+E +H+ LS
Sbjct: 71 LDGVDAVLFVVPTKVTR-LVAKQVAQA------LKHKVVVMHASKGLEPDSHKRLS 119
>sp|Q55281|MNTA_SYNY3 Manganese transport system ATP-binding protein MntA
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=mntA
PE=3 SV=1
Length = 260
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 219 RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCV 278
RIP A DRR ++E+LER+G++KY + E G + FL+ A+ + K V
Sbjct: 116 RIPSAK----DRRLVMESLERVGMVKYRDRQIGELSGGQK-KRAFLARALAQEGK----V 166
Query: 279 VFEDDP 284
+ D+P
Sbjct: 167 ILLDEP 172
>sp|B7IRS8|UNG_BACC2 Uracil-DNA glycosylase OS=Bacillus cereus (strain G9842) GN=ung
PE=3 SV=1
Length = 225
Score = 31.6 bits (70), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 116 PDEAYGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLR 159
P++A+GL FS T LN +K+L E G EIP G +++
Sbjct: 70 PNQAHGLSFSVQPGVKTPPSLLNMYKELRDEYGYEIPNNGYLVK 113
>sp|P05661|MYSA_DROME Myosin heavy chain, muscle OS=Drosophila melanogaster GN=Mhc PE=1
SV=4
Length = 1962
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 81 GFETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWDVV 129
GFE F +G ++ ++F N++LQ+ F I + M+ +E +WD +
Sbjct: 463 GFEIFEYNGFEQLCINFTNEKLQQ-FFNHIMFVMEQEEYKKEGINWDFI 510
>sp|Q814M9|UNG_BACCR Uracil-DNA glycosylase OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=ung PE=3 SV=1
Length = 225
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 116 PDEAYGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLR 159
P++A+GL FS T LN +K+L E G EIP G +++
Sbjct: 70 PNQAHGLSFSVQPGVKTPPSLLNMYKELRDEYGYEIPNNGYLVK 113
>sp|B7HG60|UNG_BACC4 Uracil-DNA glycosylase OS=Bacillus cereus (strain B4264) GN=ung
PE=3 SV=1
Length = 225
Score = 31.6 bits (70), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 116 PDEAYGLIFSWDVVADTRALKLNAWKQLAFEEGKEIPQEGDVLR 159
P++A+GL FS T LN +K+L E G EIP G +++
Sbjct: 70 PNQAHGLSFSVQPGVKTPPSLLNMYKELRDEYGYEIPNNGYLVK 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,631,038
Number of Sequences: 539616
Number of extensions: 5319514
Number of successful extensions: 12488
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 12470
Number of HSP's gapped (non-prelim): 73
length of query: 361
length of database: 191,569,459
effective HSP length: 119
effective length of query: 242
effective length of database: 127,355,155
effective search space: 30819947510
effective search space used: 30819947510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)