Query 018088
Match_columns 361
No_of_seqs 196 out of 1560
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 06:02:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018088.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018088hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02575 haloacid dehalogenase 100.0 2.9E-31 6.3E-36 256.1 27.8 244 89-340 108-355 (381)
2 PLN03243 haloacid dehalogenase 100.0 3.9E-30 8.5E-35 239.2 26.1 224 116-340 21-248 (260)
3 PLN02770 haloacid dehalogenase 100.0 7.2E-29 1.6E-33 229.6 24.0 205 118-324 21-233 (248)
4 PRK13288 pyrophosphatase PpaX; 100.0 6.4E-28 1.4E-32 218.1 23.5 203 118-326 2-210 (214)
5 PRK13226 phosphoglycolate phos 100.0 1.1E-27 2.4E-32 219.1 23.8 205 119-325 12-223 (229)
6 COG0546 Gph Predicted phosphat 100.0 1.7E-27 3.7E-32 216.5 23.7 207 118-327 3-218 (220)
7 PRK13225 phosphoglycolate phos 100.0 2.1E-27 4.6E-32 222.3 24.5 207 116-328 59-269 (273)
8 TIGR01449 PGP_bact 2-phosphogl 100.0 2.1E-27 4.5E-32 214.1 23.3 203 122-325 1-212 (213)
9 PRK10826 2-deoxyglucose-6-phos 100.0 1.3E-27 2.8E-32 217.3 22.2 210 116-326 4-219 (222)
10 COG0637 Predicted phosphatase/ 100.0 4.7E-28 1E-32 220.3 19.2 205 119-326 2-216 (221)
11 PRK13222 phosphoglycolate phos 100.0 6.6E-27 1.4E-31 212.5 26.0 216 114-330 1-225 (226)
12 TIGR01422 phosphonatase phosph 100.0 1.9E-27 4.1E-32 220.6 21.9 205 119-325 2-251 (253)
13 PRK11587 putative phosphatase; 100.0 3E-27 6.4E-32 214.5 22.0 200 118-323 2-204 (218)
14 TIGR03351 PhnX-like phosphonat 100.0 7.5E-27 1.6E-31 211.8 22.9 206 119-325 1-218 (220)
15 PRK13478 phosphonoacetaldehyde 100.0 1.3E-26 2.9E-31 216.6 22.8 207 118-326 3-254 (267)
16 PLN02779 haloacid dehalogenase 99.9 5.9E-26 1.3E-30 214.2 25.0 217 115-332 36-278 (286)
17 PRK13223 phosphoglycolate phos 99.9 1.1E-25 2.3E-30 211.1 24.5 206 118-325 12-228 (272)
18 PRK10563 6-phosphogluconate ph 99.9 4.9E-26 1.1E-30 206.7 18.8 205 119-327 4-213 (221)
19 TIGR01454 AHBA_synth_RP 3-amin 99.9 2.5E-25 5.5E-30 199.8 22.6 195 122-325 1-202 (205)
20 PLN02940 riboflavin kinase 99.9 1.4E-25 3E-30 219.6 21.6 206 118-326 10-220 (382)
21 TIGR02009 PGMB-YQAB-SF beta-ph 99.9 3.6E-25 7.7E-30 195.0 19.9 178 119-300 1-185 (185)
22 PRK06698 bifunctional 5'-methy 99.9 1.1E-24 2.4E-29 218.7 23.3 207 118-327 240-454 (459)
23 PRK10725 fructose-1-P/6-phosph 99.9 7E-25 1.5E-29 193.9 19.0 180 118-301 4-186 (188)
24 TIGR02253 CTE7 HAD superfamily 99.9 1.7E-24 3.7E-29 196.3 21.5 198 119-322 2-220 (221)
25 TIGR01990 bPGM beta-phosphoglu 99.9 1E-24 2.2E-29 192.1 19.3 176 121-300 1-184 (185)
26 PRK09449 dUMP phosphatase; Pro 99.9 1.1E-24 2.5E-29 198.0 19.4 203 118-326 2-222 (224)
27 TIGR02254 YjjG/YfnB HAD superf 99.9 4E-24 8.6E-29 193.9 22.9 203 119-325 1-223 (224)
28 PRK14988 GMP/IMP nucleotidase; 99.9 1.8E-23 4E-28 190.6 18.3 125 200-325 90-217 (224)
29 PLN02919 haloacid dehalogenase 99.9 8E-23 1.7E-27 221.9 23.6 224 118-345 74-310 (1057)
30 PRK10748 flavin mononucleotide 99.9 3.7E-23 8.1E-28 190.2 18.0 201 118-325 9-237 (238)
31 TIGR02252 DREG-2 REG-2-like, H 99.9 9.7E-23 2.1E-27 182.5 16.8 177 120-299 1-203 (203)
32 PLN02811 hydrolase 99.9 1.4E-22 3E-27 184.2 17.2 194 126-325 1-209 (220)
33 TIGR01428 HAD_type_II 2-haloal 99.9 1.7E-22 3.6E-27 180.4 15.3 103 201-303 90-194 (198)
34 PF13419 HAD_2: Haloacid dehal 99.9 1.9E-22 4.2E-27 174.3 14.5 172 122-300 1-176 (176)
35 KOG2914 Predicted haloacid-hal 99.9 3.7E-21 7.9E-26 173.1 19.1 202 118-322 9-218 (222)
36 TIGR01548 HAD-SF-IA-hyp1 haloa 99.9 4E-21 8.8E-26 171.5 19.2 172 121-293 2-197 (197)
37 TIGR02247 HAD-1A3-hyp Epoxide 99.9 2E-21 4.3E-26 175.2 16.8 180 119-302 2-197 (211)
38 TIGR01993 Pyr-5-nucltdase pyri 99.9 1.9E-21 4.1E-26 171.7 15.4 167 121-300 2-184 (184)
39 PHA02597 30.2 hypothetical pro 99.9 2.8E-21 6.2E-26 172.4 16.1 187 119-323 2-195 (197)
40 TIGR01509 HAD-SF-IA-v3 haloaci 99.9 1.4E-20 3E-25 165.1 17.7 98 202-300 84-183 (183)
41 TIGR00338 serB phosphoserine p 99.9 2.6E-21 5.5E-26 175.4 13.4 189 118-325 13-218 (219)
42 COG1011 Predicted hydrolase (H 99.9 2.5E-20 5.4E-25 169.5 19.0 126 201-327 97-227 (229)
43 PRK11133 serB phosphoserine ph 99.8 6E-21 1.3E-25 182.3 13.1 182 117-317 108-304 (322)
44 PLN02954 phosphoserine phospha 99.8 1.5E-19 3.3E-24 164.2 19.2 191 119-325 12-222 (224)
45 PRK09456 ?-D-glucose-1-phospha 99.8 8.5E-20 1.8E-24 163.3 14.5 101 203-303 84-187 (199)
46 TIGR01549 HAD-SF-IA-v1 haloaci 99.8 3.5E-19 7.5E-24 152.4 16.8 152 121-294 1-154 (154)
47 TIGR01691 enolase-ppase 2,3-di 99.8 4.1E-18 8.8E-23 154.4 20.6 200 119-321 1-219 (220)
48 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.8 2.4E-18 5.3E-23 153.3 14.6 100 201-300 78-189 (201)
49 PRK13582 thrH phosphoserine ph 99.8 8.4E-18 1.8E-22 150.7 16.1 186 119-330 1-199 (205)
50 TIGR01493 HAD-SF-IA-v2 Haloaci 99.8 1.9E-18 4.1E-23 151.0 10.3 157 121-293 1-175 (175)
51 PRK08942 D,D-heptose 1,7-bisph 99.8 9.7E-18 2.1E-22 147.8 14.5 123 203-327 29-177 (181)
52 KOG3085 Predicted hydrolase (H 99.8 4.5E-18 9.7E-23 153.8 12.0 186 116-302 4-214 (237)
53 TIGR01672 AphA HAD superfamily 99.7 5.2E-17 1.1E-21 148.5 17.4 151 116-305 60-216 (237)
54 PRK09552 mtnX 2-hydroxy-3-keto 99.7 4.1E-17 9E-22 148.1 14.4 193 120-330 4-216 (219)
55 TIGR01685 MDP-1 magnesium-depe 99.7 7.9E-18 1.7E-22 146.8 7.4 102 201-302 43-158 (174)
56 TIGR00213 GmhB_yaeD D,D-heptos 99.7 1.8E-16 4E-21 139.1 13.4 119 203-323 26-175 (176)
57 PRK06769 hypothetical protein; 99.7 1.1E-16 2.5E-21 140.1 11.5 124 203-326 28-171 (173)
58 COG0560 SerB Phosphoserine pho 99.7 1.6E-16 3.5E-21 143.4 10.9 165 119-299 5-185 (212)
59 TIGR01489 DKMTPPase-SF 2,3-dik 99.7 1.2E-15 2.5E-20 134.4 16.1 92 202-296 71-184 (188)
60 cd01427 HAD_like Haloacid deha 99.7 7.7E-16 1.7E-20 127.0 10.9 101 200-300 21-139 (139)
61 TIGR02137 HSK-PSP phosphoserin 99.6 3.8E-15 8.2E-20 133.7 14.4 179 120-329 2-198 (203)
62 KOG3109 Haloacid dehalogenase- 99.6 9.5E-15 2.1E-19 128.2 15.8 202 118-330 14-231 (244)
63 TIGR03333 salvage_mtnX 2-hydro 99.6 5.9E-15 1.3E-19 133.6 13.5 192 122-330 2-212 (214)
64 KOG1615 Phosphoserine phosphat 99.6 1.6E-15 3.4E-20 130.6 7.5 187 119-323 16-222 (227)
65 TIGR01488 HAD-SF-IB Haloacid D 99.6 2.3E-14 5E-19 125.1 11.0 93 201-293 71-177 (177)
66 PRK11009 aphA acid phosphatase 99.6 4.9E-14 1.1E-18 128.8 13.5 99 200-305 111-216 (237)
67 TIGR01656 Histidinol-ppas hist 99.6 2.2E-14 4.8E-19 122.2 10.1 98 203-301 27-145 (147)
68 TIGR01662 HAD-SF-IIIA HAD-supe 99.5 3.8E-14 8.3E-19 118.2 10.9 97 203-301 25-131 (132)
69 TIGR01261 hisB_Nterm histidino 99.5 1.5E-14 3.2E-19 125.1 8.6 99 203-303 29-149 (161)
70 TIGR01681 HAD-SF-IIIC HAD-supe 99.5 1.8E-14 3.9E-19 119.9 8.6 88 203-292 29-126 (128)
71 TIGR01490 HAD-SF-IB-hyp1 HAD-s 99.5 1.4E-13 3E-18 123.0 14.2 119 176-299 65-196 (202)
72 PF00702 Hydrolase: haloacid d 99.5 3.7E-14 8.1E-19 127.1 6.7 87 203-294 127-215 (215)
73 TIGR02726 phenyl_P_delta pheny 99.5 1.8E-13 3.8E-18 119.1 9.8 115 212-335 43-159 (169)
74 smart00577 CPDc catalytic doma 99.5 6.8E-14 1.5E-18 119.4 6.2 96 202-299 44-140 (148)
75 TIGR01668 YqeG_hyp_ppase HAD s 99.4 1.3E-12 2.7E-17 114.2 13.1 97 203-306 43-142 (170)
76 TIGR01452 PGP_euk phosphoglyco 99.4 6.6E-14 1.4E-18 131.8 5.2 118 204-322 144-279 (279)
77 PRK11590 hypothetical protein; 99.4 1E-11 2.2E-16 112.1 17.9 174 118-299 5-201 (211)
78 TIGR01670 YrbI-phosphatas 3-de 99.4 9.2E-13 2E-17 113.1 10.3 114 211-333 36-152 (154)
79 TIGR01664 DNA-3'-Pase DNA 3'-p 99.4 1E-12 2.2E-17 114.2 9.3 95 203-299 42-160 (166)
80 PRK09484 3-deoxy-D-manno-octul 99.4 2.4E-12 5.1E-17 113.8 9.6 108 211-327 56-169 (183)
81 PRK05446 imidazole glycerol-ph 99.4 7.3E-12 1.6E-16 120.8 12.7 99 202-302 29-149 (354)
82 PHA02530 pseT polynucleotide k 99.4 3E-12 6.5E-17 121.6 9.8 99 202-300 186-295 (300)
83 TIGR01458 HAD-SF-IIA-hyp3 HAD- 99.3 1.8E-12 3.8E-17 120.7 5.9 124 204-327 121-255 (257)
84 TIGR01686 FkbH FkbH-like domai 99.3 4.9E-12 1.1E-16 121.4 8.6 91 203-296 31-125 (320)
85 PLN02645 phosphoglycolate phos 99.3 2.9E-12 6.2E-17 122.6 6.7 116 211-326 178-307 (311)
86 TIGR01544 HAD-SF-IE haloacid d 99.3 9.4E-11 2E-15 109.1 16.5 93 201-293 119-230 (277)
87 PRK10530 pyridoxal phosphate ( 99.3 6.6E-11 1.4E-15 110.5 13.3 115 205-321 139-260 (272)
88 PRK10444 UMP phosphatase; Prov 99.3 5.3E-11 1.1E-15 110.1 12.2 67 257-323 174-246 (248)
89 PF06888 Put_Phosphatase: Puta 99.2 1.8E-10 3.8E-15 105.0 13.5 161 121-299 2-194 (234)
90 PF13242 Hydrolase_like: HAD-h 99.2 3.8E-11 8.2E-16 90.3 7.6 67 256-322 3-75 (75)
91 TIGR01457 HAD-SF-IIA-hyp2 HAD- 99.2 1.2E-10 2.6E-15 107.9 11.3 116 205-322 123-249 (249)
92 PRK08238 hypothetical protein; 99.2 3.7E-10 8E-15 113.6 14.5 94 203-302 72-166 (479)
93 COG2179 Predicted hydrolase of 99.2 1.6E-10 3.4E-15 98.0 9.3 90 203-301 46-138 (175)
94 PRK01158 phosphoglycolate phos 99.1 2.2E-09 4.7E-14 97.8 12.8 96 222-321 118-218 (230)
95 COG4229 Predicted enolase-phos 99.0 1.3E-08 2.8E-13 87.3 15.8 119 201-320 101-224 (229)
96 TIGR02244 HAD-IG-Ncltidse HAD 99.0 1.5E-09 3.2E-14 104.2 11.0 102 200-301 181-323 (343)
97 TIGR01545 YfhB_g-proteo haloac 99.0 1.4E-08 3E-13 91.7 16.7 119 176-299 71-200 (210)
98 PF12689 Acid_PPase: Acid Phos 99.0 2.4E-10 5.2E-15 99.1 4.9 99 201-302 43-152 (169)
99 TIGR01512 ATPase-IB2_Cd heavy 99.0 1.4E-09 3E-14 111.5 10.6 114 202-326 361-478 (536)
100 TIGR01525 ATPase-IB_hvy heavy 99.0 1.5E-09 3.3E-14 111.8 10.9 114 202-326 383-499 (556)
101 PF12710 HAD: haloacid dehalog 99.0 2.2E-09 4.7E-14 94.7 9.9 84 206-291 92-192 (192)
102 TIGR01482 SPP-subfamily Sucros 99.0 4.4E-10 9.6E-15 101.9 4.6 98 222-321 110-210 (225)
103 TIGR01533 lipo_e_P4 5'-nucleot 99.0 1.9E-08 4.2E-13 93.6 14.7 86 201-291 116-205 (266)
104 TIGR01511 ATPase-IB1_Cu copper 98.9 5.6E-09 1.2E-13 107.6 11.2 113 202-326 404-518 (562)
105 COG0647 NagD Predicted sugar p 98.9 4.9E-09 1.1E-13 97.4 9.7 69 259-327 190-266 (269)
106 COG0241 HisB Histidinol phosph 98.9 3.3E-08 7.1E-13 86.3 14.2 119 203-323 31-173 (181)
107 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.9 8.6E-10 1.9E-14 101.7 4.0 96 205-301 140-241 (242)
108 KOG3120 Predicted haloacid deh 98.9 1.5E-08 3.3E-13 89.5 11.4 100 201-300 82-209 (256)
109 TIGR01487 SPP-like sucrose-pho 98.9 1.3E-09 2.9E-14 98.4 4.2 99 221-321 109-208 (215)
110 PF09419 PGP_phosphatase: Mito 98.9 2.6E-08 5.7E-13 86.1 11.7 91 204-302 60-165 (168)
111 PRK00192 mannosyl-3-phosphogly 98.9 2.8E-08 6.1E-13 93.2 12.7 82 214-299 143-232 (273)
112 TIGR02251 HIF-SF_euk Dullard-l 98.8 2.2E-09 4.9E-14 92.9 2.7 99 202-302 41-140 (162)
113 TIGR01456 CECR5 HAD-superfamil 98.8 1.1E-07 2.3E-12 91.4 14.4 69 258-326 232-320 (321)
114 TIGR01663 PNK-3'Pase polynucle 98.8 1.7E-08 3.7E-13 102.2 8.7 90 204-295 198-305 (526)
115 COG0561 Cof Predicted hydrolas 98.8 5.9E-09 1.3E-13 97.1 4.4 63 257-321 188-250 (264)
116 PRK15126 thiamin pyrimidine py 98.7 7.1E-09 1.5E-13 97.1 3.9 63 257-321 187-251 (272)
117 KOG2882 p-Nitrophenyl phosphat 98.7 4.9E-08 1.1E-12 90.4 9.1 68 258-325 223-302 (306)
118 PRK10671 copA copper exporting 98.7 4.8E-08 1E-12 105.3 10.6 114 203-327 650-765 (834)
119 PRK10513 sugar phosphate phosp 98.7 5.6E-08 1.2E-12 90.7 9.4 63 257-321 195-257 (270)
120 TIGR01459 HAD-SF-IIA-hyp4 HAD- 98.7 3.1E-08 6.7E-13 91.3 7.1 92 201-295 22-116 (242)
121 TIGR01460 HAD-SF-IIA Haloacid 98.7 1E-07 2.2E-12 87.6 10.3 45 257-301 188-234 (236)
122 COG4087 Soluble P-type ATPase 98.7 1.5E-07 3.2E-12 76.6 9.2 121 200-328 27-148 (152)
123 TIGR01522 ATPase-IIA2_Ca golgi 98.7 9.3E-08 2E-12 103.6 10.8 123 203-327 528-671 (884)
124 KOG3040 Predicted sugar phosph 98.7 6.6E-08 1.4E-12 84.7 7.7 74 257-330 181-260 (262)
125 PLN02887 hydrolase family prot 98.7 2.1E-08 4.6E-13 102.8 5.4 63 257-321 506-568 (580)
126 PRK03669 mannosyl-3-phosphogly 98.6 1.6E-07 3.5E-12 87.9 7.9 63 257-320 186-256 (271)
127 PTZ00445 p36-lilke protein; Pr 98.6 3.6E-07 7.9E-12 81.1 9.4 100 203-302 75-206 (219)
128 COG1778 Low specificity phosph 98.6 5.1E-08 1.1E-12 81.8 3.8 97 212-317 44-140 (170)
129 TIGR01684 viral_ppase viral ph 98.5 2.6E-07 5.6E-12 86.2 8.4 56 205-260 148-203 (301)
130 TIGR00099 Cof-subfamily Cof su 98.5 1.1E-07 2.5E-12 88.1 5.5 63 257-321 187-249 (256)
131 PRK11033 zntA zinc/cadmium/mer 98.5 9.9E-07 2.1E-11 93.8 12.3 110 203-325 568-679 (741)
132 COG4359 Uncharacterized conser 98.4 3.2E-06 7E-11 72.9 11.2 188 121-331 5-216 (220)
133 TIGR02471 sucr_syn_bact_C sucr 98.4 6.2E-07 1.3E-11 82.2 7.0 60 257-318 158-221 (236)
134 TIGR01116 ATPase-IIA1_Ca sarco 98.4 2.3E-06 5E-11 93.1 11.9 123 203-327 537-683 (917)
135 PRK14010 potassium-transportin 98.3 3.2E-06 7E-11 88.3 11.4 120 203-333 441-564 (673)
136 PHA03398 viral phosphatase sup 98.3 3.5E-06 7.6E-11 78.8 9.4 50 205-254 150-199 (303)
137 TIGR01497 kdpB K+-transporting 98.3 3.4E-06 7.5E-11 88.0 10.3 122 203-335 446-571 (675)
138 TIGR01485 SPP_plant-cyano sucr 98.3 1.1E-05 2.3E-10 74.7 11.8 45 257-301 166-210 (249)
139 TIGR01675 plant-AP plant acid 98.2 5.1E-05 1.1E-09 69.0 15.5 162 88-300 49-221 (229)
140 PRK01122 potassium-transportin 98.2 8.2E-06 1.8E-10 85.3 11.1 123 203-336 445-571 (679)
141 PF06941 NT5C: 5' nucleotidase 98.2 1.9E-05 4.1E-10 70.1 11.4 112 199-329 69-188 (191)
142 PF08282 Hydrolase_3: haloacid 98.2 1.5E-05 3.3E-10 72.4 10.8 58 262-321 190-247 (254)
143 COG2217 ZntA Cation transport 98.1 1.3E-05 2.9E-10 84.0 10.5 113 202-325 536-650 (713)
144 TIGR02461 osmo_MPG_phos mannos 98.1 3.2E-06 6.9E-11 77.1 4.9 43 256-298 179-223 (225)
145 TIGR02463 MPGP_rel mannosyl-3- 98.1 1.3E-05 2.9E-10 72.5 8.8 70 226-298 146-219 (221)
146 PF03767 Acid_phosphat_B: HAD 98.1 1.4E-05 3.1E-10 73.0 8.8 87 203-293 115-211 (229)
147 KOG2630 Enolase-phosphatase E- 98.1 0.00026 5.7E-09 63.3 16.3 122 203-324 123-250 (254)
148 PRK10976 putative hydrolase; P 98.0 7.9E-06 1.7E-10 76.1 5.6 63 257-321 189-253 (266)
149 PF08645 PNK3P: Polynucleotide 98.0 2.2E-05 4.8E-10 67.7 7.6 92 204-297 30-152 (159)
150 TIGR01524 ATPase-IIIB_Mg magne 98.0 4.8E-05 1E-09 82.4 11.5 120 203-326 515-654 (867)
151 TIGR01517 ATPase-IIB_Ca plasma 98.0 4.3E-05 9.3E-10 83.6 11.1 122 203-326 579-721 (941)
152 PRK10517 magnesium-transportin 97.9 2.5E-05 5.4E-10 84.8 8.5 121 203-327 550-690 (902)
153 TIGR01523 ATPase-IID_K-Na pota 97.9 5.4E-05 1.2E-09 83.4 11.1 122 203-326 646-798 (1053)
154 PRK15122 magnesium-transportin 97.9 6E-05 1.3E-09 81.9 10.9 121 203-327 550-690 (903)
155 PF05761 5_nucleotid: 5' nucle 97.9 6.9E-05 1.5E-09 74.8 9.6 101 202-302 182-325 (448)
156 TIGR01647 ATPase-IIIA_H plasma 97.8 3.4E-05 7.3E-10 82.4 7.2 116 203-323 442-583 (755)
157 COG2503 Predicted secreted aci 97.8 0.0004 8.8E-09 62.7 12.1 85 202-290 121-209 (274)
158 PF11019 DUF2608: Protein of u 97.7 0.002 4.4E-08 59.8 16.7 96 203-300 81-208 (252)
159 PLN02645 phosphoglycolate phos 97.7 0.00033 7.1E-09 67.1 11.6 90 203-299 44-136 (311)
160 PF05116 S6PP: Sucrose-6F-phos 97.7 0.00016 3.4E-09 67.0 8.3 45 257-302 164-208 (247)
161 smart00775 LNS2 LNS2 domain. T 97.7 0.00047 1E-08 59.3 10.3 94 204-297 28-142 (157)
162 TIGR01106 ATPase-IIC_X-K sodiu 97.7 0.00022 4.8E-09 78.5 10.3 123 203-327 568-737 (997)
163 PLN03190 aminophospholipid tra 97.6 0.00012 2.7E-09 81.2 8.0 52 275-327 872-923 (1178)
164 TIGR02250 FCP1_euk FCP1-like p 97.6 0.00012 2.7E-09 62.9 6.3 80 201-285 56-138 (156)
165 KOG0207 Cation transport ATPas 97.6 0.00027 5.9E-09 74.3 9.3 111 202-323 722-834 (951)
166 TIGR01652 ATPase-Plipid phosph 97.6 0.00017 3.7E-09 79.9 8.3 123 203-326 631-819 (1057)
167 TIGR01680 Veg_Stor_Prot vegeta 97.5 0.0032 7E-08 58.5 14.8 96 201-300 143-248 (275)
168 COG0474 MgtA Cation transport 97.5 0.00031 6.7E-09 76.6 9.4 98 202-299 546-663 (917)
169 TIGR00685 T6PP trehalose-phosp 97.5 0.00041 8.8E-09 64.0 8.8 68 257-327 166-240 (244)
170 PRK14502 bifunctional mannosyl 97.4 0.00053 1.1E-08 71.2 8.5 44 256-299 611-656 (694)
171 KOG0202 Ca2+ transporting ATPa 97.4 0.00048 1E-08 71.9 8.2 98 202-299 583-702 (972)
172 TIGR01658 EYA-cons_domain eyes 97.4 0.0076 1.6E-07 54.8 14.7 76 223-302 179-258 (274)
173 COG3700 AphA Acid phosphatase 97.4 0.00053 1.2E-08 59.1 6.6 91 203-300 114-210 (237)
174 PLN02177 glycerol-3-phosphate 97.3 0.0066 1.4E-07 61.7 15.5 112 176-297 88-211 (497)
175 PF13344 Hydrolase_6: Haloacid 97.3 0.002 4.4E-08 51.1 8.8 86 201-295 12-100 (101)
176 TIGR01494 ATPase_P-type ATPase 97.2 0.002 4.4E-08 65.7 10.7 97 203-318 347-443 (499)
177 TIGR01486 HAD-SF-IIB-MPGP mann 97.2 0.0012 2.7E-08 61.1 8.4 43 257-299 175-219 (256)
178 PRK12702 mannosyl-3-phosphogly 97.2 0.003 6.6E-08 59.4 10.8 43 257-299 207-251 (302)
179 TIGR01657 P-ATPase-V P-type AT 97.2 0.0029 6.2E-08 70.3 12.3 41 203-243 656-696 (1054)
180 PRK14501 putative bifunctional 97.1 0.017 3.6E-07 61.8 16.7 64 257-327 656-721 (726)
181 TIGR01484 HAD-SF-IIB HAD-super 97.1 0.00055 1.2E-08 61.0 4.3 42 257-298 162-203 (204)
182 COG4996 Predicted phosphatase 97.1 0.003 6.6E-08 51.8 7.8 84 202-287 40-129 (164)
183 COG4030 Uncharacterized protei 97.1 0.0036 7.8E-08 56.1 8.9 120 202-323 82-256 (315)
184 PLN02205 alpha,alpha-trehalose 97.0 0.022 4.9E-07 61.6 15.7 67 257-328 761-843 (854)
185 KOG0206 P-type ATPase [General 96.8 0.0029 6.3E-08 69.3 7.5 60 273-337 793-852 (1151)
186 PLN02382 probable sucrose-phos 96.8 0.0065 1.4E-07 60.5 9.0 44 257-300 174-220 (413)
187 KOG2470 Similar to IMP-GMP spe 96.7 0.028 6.1E-07 53.5 12.5 98 204-301 241-375 (510)
188 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.7 0.0073 1.6E-07 56.2 8.5 49 204-252 22-73 (257)
189 PF05152 DUF705: Protein of un 96.7 0.013 2.7E-07 54.6 9.6 49 205-253 144-192 (297)
190 COG2216 KdpB High-affinity K+ 96.6 0.0042 9.1E-08 61.9 6.2 91 203-302 447-537 (681)
191 PRK10187 trehalose-6-phosphate 96.6 0.011 2.4E-07 55.2 8.9 66 257-328 173-242 (266)
192 TIGR01452 PGP_euk phosphoglyco 96.6 0.022 4.8E-07 53.5 10.9 89 202-298 17-108 (279)
193 PF08235 LNS2: LNS2 (Lipin/Ned 96.3 0.043 9.2E-07 47.0 9.9 92 204-296 28-141 (157)
194 PF03031 NIF: NLI interacting 96.3 0.0031 6.8E-08 53.9 2.9 83 202-286 35-118 (159)
195 TIGR02245 HAD_IIID1 HAD-superf 95.9 0.029 6.4E-07 49.9 7.3 91 203-296 45-151 (195)
196 COG4502 5'(3')-deoxyribonucleo 95.7 0.028 6E-07 46.8 5.7 107 201-330 66-178 (180)
197 COG3882 FkbH Predicted enzyme 95.6 0.058 1.3E-06 53.6 8.6 84 207-295 259-348 (574)
198 KOG0210 P-type ATPase [Inorgan 95.3 0.036 7.9E-07 57.2 6.3 120 204-327 712-833 (1051)
199 PRK10976 putative hydrolase; P 95.3 0.043 9.2E-07 50.9 6.5 37 209-245 25-61 (266)
200 COG5610 Predicted hydrolase (H 95.2 0.064 1.4E-06 52.9 7.2 97 203-299 99-200 (635)
201 KOG3107 Predicted haloacid deh 95.2 0.43 9.3E-06 46.1 12.6 77 222-301 373-451 (468)
202 TIGR01457 HAD-SF-IIA-hyp2 HAD- 95.0 0.23 5.1E-06 45.8 10.4 98 203-300 17-142 (249)
203 KOG0204 Calcium transporting A 93.9 0.23 4.9E-06 52.7 8.2 117 202-323 646-788 (1034)
204 PTZ00174 phosphomannomutase; P 93.8 0.15 3.3E-06 47.0 6.3 28 274-301 200-231 (247)
205 COG5663 Uncharacterized conser 93.8 0.19 4.2E-06 43.2 6.3 115 203-330 72-190 (194)
206 PRK10444 UMP phosphatase; Prov 93.7 0.63 1.4E-05 43.0 10.2 83 203-285 17-119 (248)
207 KOG2961 Predicted hydrolase (H 93.4 0.84 1.8E-05 38.8 9.3 90 204-301 62-167 (190)
208 PTZ00174 phosphomannomutase; P 93.0 0.093 2E-06 48.3 3.4 35 117-151 3-41 (247)
209 PLN02580 trehalose-phosphatase 92.6 0.45 9.7E-06 46.8 7.8 69 256-328 299-375 (384)
210 TIGR01460 HAD-SF-IIA Haloacid 92.2 1.5 3.3E-05 40.0 10.5 86 202-296 13-102 (236)
211 PLN02423 phosphomannomutase 91.7 0.16 3.4E-06 46.9 3.3 41 257-302 188-232 (245)
212 KOG0203 Na+/K+ ATPase, alpha s 91.7 0.58 1.3E-05 49.7 7.6 97 203-299 590-730 (1019)
213 KOG3128 Uncharacterized conser 91.4 1.9 4.1E-05 39.7 9.7 91 203-293 138-247 (298)
214 PLN02499 glycerol-3-phosphate 91.3 2.9 6.3E-05 42.4 11.8 109 176-294 74-192 (498)
215 PF05822 UMPH-1: Pyrimidine 5' 89.1 0.72 1.6E-05 42.5 5.1 92 201-293 88-198 (246)
216 KOG2882 p-Nitrophenyl phosphat 88.8 3.3 7.1E-05 39.1 9.3 93 201-300 36-131 (306)
217 KOG0209 P-type ATPase [Inorgan 88.3 0.49 1.1E-05 50.2 3.9 42 202-243 674-715 (1160)
218 PRK00192 mannosyl-3-phosphogly 87.5 1.1 2.4E-05 41.8 5.5 43 204-246 22-64 (273)
219 TIGR01456 CECR5 HAD-superfamil 86.0 3.3 7.1E-05 39.8 8.0 87 202-299 15-109 (321)
220 PRK10513 sugar phosphate phosp 85.7 2.3 5E-05 39.3 6.6 42 203-244 20-61 (270)
221 TIGR02463 MPGP_rel mannosyl-3- 85.3 1.7 3.6E-05 39.0 5.3 39 205-243 18-56 (221)
222 TIGR02461 osmo_MPG_phos mannos 85.2 1.7 3.8E-05 39.4 5.4 42 204-245 16-57 (225)
223 KOG4549 Magnesium-dependent ph 83.8 3.9 8.5E-05 33.6 6.1 83 203-285 44-133 (144)
224 TIGR01487 SPP-like sucrose-pho 82.6 2.1 4.6E-05 38.2 4.8 42 204-245 19-60 (215)
225 KOG3040 Predicted sugar phosph 82.6 5.6 0.00012 35.7 7.1 41 203-243 23-66 (262)
226 KOG2469 IMP-GMP specific 5'-nu 81.8 4.2 9.2E-05 39.9 6.6 95 208-302 203-334 (424)
227 PRK01158 phosphoglycolate phos 81.8 2.9 6.3E-05 37.5 5.4 43 203-245 20-62 (230)
228 TIGR00099 Cof-subfamily Cof su 80.8 3.7 8E-05 37.6 5.8 42 203-244 16-57 (256)
229 KOG2116 Protein involved in pl 80.5 5.1 0.00011 41.6 6.9 122 119-297 530-673 (738)
230 PRK12702 mannosyl-3-phosphogly 80.1 3.2 7E-05 39.3 5.1 42 205-246 20-61 (302)
231 TIGR01486 HAD-SF-IIB-MPGP mann 79.9 3.6 7.7E-05 37.9 5.4 41 205-245 18-58 (256)
232 PRK15126 thiamin pyrimidine py 79.5 3.9 8.5E-05 37.9 5.6 43 203-245 19-61 (272)
233 PF13580 SIS_2: SIS domain; PD 79.5 19 0.00041 29.8 9.2 98 205-302 21-138 (138)
234 KOG0323 TFIIF-interacting CTD 79.0 3.5 7.5E-05 43.1 5.4 57 202-259 200-258 (635)
235 PLN02423 phosphomannomutase 78.6 1.2 2.7E-05 40.9 1.8 20 117-136 4-25 (245)
236 COG4850 Uncharacterized conser 78.3 9.5 0.00021 36.5 7.5 95 202-300 195-308 (373)
237 COG0561 Cof Predicted hydrolas 78.0 4.4 9.6E-05 37.3 5.4 42 203-244 20-61 (264)
238 TIGR01482 SPP-subfamily Sucros 78.0 4 8.6E-05 36.4 4.9 42 203-244 15-56 (225)
239 TIGR01689 EcbF-BcbF capsule bi 77.0 7.2 0.00016 32.2 5.7 49 203-253 24-87 (126)
240 PRK10530 pyridoxal phosphate ( 76.9 5.3 0.00011 36.8 5.6 43 203-245 20-62 (272)
241 cd04728 ThiG Thiazole synthase 75.1 34 0.00074 31.5 10.1 96 201-302 102-205 (248)
242 PRK03669 mannosyl-3-phosphogly 74.6 8.4 0.00018 35.7 6.3 40 204-243 25-64 (271)
243 PRK00208 thiG thiazole synthas 73.5 31 0.00067 31.9 9.4 96 201-302 102-205 (250)
244 PLN03017 trehalose-phosphatase 69.7 14 0.00031 36.1 6.7 71 257-331 282-359 (366)
245 COG1877 OtsB Trehalose-6-phosp 68.7 1E+02 0.0022 28.8 13.4 200 120-342 19-263 (266)
246 COG2179 Predicted hydrolase of 66.9 5.8 0.00013 34.3 3.0 34 118-151 27-65 (175)
247 KOG0208 Cation transport ATPas 66.3 13 0.00028 40.6 6.0 45 203-247 705-749 (1140)
248 COG0731 Fe-S oxidoreductases [ 65.5 24 0.00051 33.5 7.1 46 201-252 90-136 (296)
249 TIGR01484 HAD-SF-IIB HAD-super 65.5 12 0.00025 32.9 4.9 38 203-240 17-54 (204)
250 PTZ00445 p36-lilke protein; Pr 64.9 5.9 0.00013 35.7 2.8 36 116-151 40-94 (219)
251 COG5083 SMP2 Uncharacterized p 64.3 25 0.00055 35.1 7.1 41 257-297 472-517 (580)
252 COG0647 NagD Predicted sugar p 62.9 3.4 7.5E-05 38.7 1.0 35 117-151 6-43 (269)
253 TIGR01485 SPP_plant-cyano sucr 62.8 16 0.00034 33.4 5.4 46 205-251 23-68 (249)
254 PLN02151 trehalose-phosphatase 62.0 19 0.00042 35.1 6.0 71 257-332 268-346 (354)
255 TIGR01670 YrbI-phosphatas 3-de 61.7 4.4 9.6E-05 34.3 1.4 14 119-132 1-15 (154)
256 PF02358 Trehalose_PPase: Treh 60.3 14 0.0003 33.5 4.5 62 257-318 164-233 (235)
257 TIGR02468 sucrsPsyn_pln sucros 60.0 28 0.00061 38.8 7.4 70 230-302 923-1002(1050)
258 KOG2832 TFIIF-interacting CTD 57.9 27 0.00059 34.0 6.0 82 202-285 213-294 (393)
259 TIGR01689 EcbF-BcbF capsule bi 57.7 5.6 0.00012 32.8 1.3 13 120-132 2-15 (126)
260 COG2896 MoaA Molybdenum cofact 56.1 73 0.0016 30.7 8.7 82 203-298 71-154 (322)
261 TIGR01662 HAD-SF-IIIA HAD-supe 54.8 6.1 0.00013 32.1 1.1 13 120-132 1-14 (132)
262 COG2099 CobK Precorrin-6x redu 53.8 1.4E+02 0.003 27.8 9.7 95 204-303 113-231 (257)
263 COG3769 Predicted hydrolase (H 53.4 19 0.00042 32.7 4.0 37 208-244 28-64 (274)
264 PRK09484 3-deoxy-D-manno-octul 52.4 7.9 0.00017 33.8 1.5 15 118-132 20-35 (183)
265 PRK13762 tRNA-modifying enzyme 52.0 49 0.0011 31.8 6.9 29 203-231 142-170 (322)
266 PRK10187 trehalose-6-phosphate 51.8 22 0.00049 33.0 4.5 40 203-242 36-76 (266)
267 COG1737 RpiR Transcriptional r 51.7 2.1E+02 0.0045 26.8 12.6 172 129-315 28-225 (281)
268 PRK11840 bifunctional sulfur c 51.0 1.2E+02 0.0026 29.3 9.1 96 200-301 175-278 (326)
269 PF08282 Hydrolase_3: haloacid 49.4 6.8 0.00015 34.9 0.6 23 205-227 81-103 (254)
270 TIGR03470 HpnH hopanoid biosyn 48.8 2.5E+02 0.0053 26.8 11.2 28 203-230 84-111 (318)
271 KOG1618 Predicted phosphatase 48.5 61 0.0013 31.2 6.6 87 200-298 48-143 (389)
272 cd05007 SIS_Etherase N-acetylm 48.2 2.3E+02 0.0049 26.2 13.0 59 259-317 103-168 (257)
273 PRK14502 bifunctional mannosyl 48.0 32 0.00069 36.5 5.3 41 205-245 435-475 (694)
274 TIGR00715 precor6x_red precorr 47.9 2.3E+02 0.005 26.2 11.6 59 264-329 190-254 (256)
275 TIGR00236 wecB UDP-N-acetylglu 47.7 1.4E+02 0.003 28.6 9.5 92 208-301 16-117 (365)
276 TIGR02471 sucr_syn_bact_C sucr 47.7 39 0.00086 30.4 5.4 41 210-252 22-62 (236)
277 PRK00994 F420-dependent methyl 46.1 2.4E+02 0.0053 26.0 10.3 86 212-302 23-117 (277)
278 PF03332 PMM: Eukaryotic phosp 46.0 24 0.00052 31.9 3.5 45 208-253 1-45 (220)
279 PLN02887 hydrolase family prot 45.1 49 0.0011 34.6 6.1 41 203-243 325-365 (580)
280 TIGR02726 phenyl_P_delta pheny 44.9 13 0.00027 32.3 1.5 16 118-133 6-22 (169)
281 PF02350 Epimerase_2: UDP-N-ac 44.8 61 0.0013 31.4 6.5 87 214-303 2-100 (346)
282 PF03031 NIF: NLI interacting 43.3 12 0.00025 31.6 1.0 14 120-133 1-15 (159)
283 TIGR03140 AhpF alkyl hydropero 42.1 1.1E+02 0.0025 31.2 8.3 98 200-300 127-241 (515)
284 PRK11337 DNA-binding transcrip 41.7 2.9E+02 0.0063 25.6 13.1 99 205-316 127-236 (292)
285 cd04256 AAK_P5CS_ProBA AAK_P5C 41.6 24 0.00053 33.3 3.0 75 208-282 36-128 (284)
286 COG0761 lytB 4-Hydroxy-3-methy 41.3 1.2E+02 0.0025 28.8 7.3 90 203-303 168-266 (294)
287 TIGR01656 Histidinol-ppas hist 40.7 14 0.0003 30.8 1.2 15 120-134 1-16 (147)
288 PRK15317 alkyl hydroperoxide r 39.6 1.3E+02 0.0027 30.9 8.1 98 200-300 126-240 (517)
289 PF04413 Glycos_transf_N: 3-De 38.6 40 0.00087 29.6 3.8 71 210-287 109-184 (186)
290 KOG0205 Plasma membrane H+-tra 37.4 82 0.0018 33.4 6.1 95 203-297 492-607 (942)
291 PF06014 DUF910: Bacterial pro 37.0 26 0.00057 25.0 1.9 24 264-291 8-31 (62)
292 TIGR00262 trpA tryptophan synt 36.6 2.7E+02 0.0059 25.7 9.2 91 203-300 124-226 (256)
293 KOG2134 Polynucleotide kinase 36.3 81 0.0018 31.1 5.6 94 203-298 104-230 (422)
294 TIGR01664 DNA-3'-Pase DNA 3'-p 36.3 20 0.00042 30.8 1.4 15 119-133 13-28 (166)
295 TIGR02495 NrdG2 anaerobic ribo 35.4 76 0.0016 27.4 5.0 39 203-241 74-112 (191)
296 PRK13125 trpA tryptophan synth 34.8 3.2E+02 0.007 24.8 9.3 91 206-300 116-213 (244)
297 TIGR00290 MJ0570_dom MJ0570-re 34.0 2.2E+02 0.0048 25.9 7.8 80 217-300 56-140 (223)
298 PRK12570 N-acetylmuramic acid- 33.9 4.1E+02 0.009 25.1 10.7 58 260-317 113-177 (296)
299 COG5190 FCP1 TFIIF-interacting 33.7 78 0.0017 31.3 5.2 83 203-287 252-334 (390)
300 PRK10076 pyruvate formate lyas 33.3 77 0.0017 28.5 4.8 35 204-238 51-88 (213)
301 PRK15482 transcriptional regul 33.3 4E+02 0.0086 24.7 13.1 99 205-316 122-231 (285)
302 TIGR02329 propionate_PrpR prop 33.2 2.5E+02 0.0054 29.1 9.0 86 207-302 85-171 (526)
303 COG1778 Low specificity phosph 33.2 24 0.00052 30.3 1.4 16 118-133 7-23 (170)
304 TIGR02244 HAD-IG-Ncltidse HAD 33.2 48 0.001 32.2 3.6 35 116-150 9-50 (343)
305 PF10307 DUF2410: Hypothetical 33.1 3.3E+02 0.0071 24.3 8.6 85 206-293 57-152 (197)
306 COG3785 Uncharacterized conser 33.1 24 0.00051 27.9 1.2 24 108-133 19-43 (116)
307 TIGR02250 FCP1_euk FCP1-like p 33.0 25 0.00054 29.9 1.5 15 119-133 6-21 (156)
308 PRK14129 heat shock protein Hs 32.8 32 0.00069 27.2 1.9 17 117-133 17-34 (105)
309 PF14336 DUF4392: Domain of un 32.2 1.5E+02 0.0032 28.1 6.7 25 205-229 62-86 (291)
310 PF03603 DNA_III_psi: DNA poly 31.3 1.3E+02 0.0028 24.8 5.3 105 214-323 8-112 (128)
311 PF05761 5_nucleotid: 5' nucle 30.6 44 0.00095 33.8 3.0 36 116-151 9-51 (448)
312 TIGR03151 enACPred_II putative 30.5 4.8E+02 0.01 24.8 10.9 82 210-300 100-189 (307)
313 PF08645 PNK3P: Polynucleotide 30.4 22 0.00048 30.3 0.7 14 120-133 1-15 (159)
314 PRK15424 propionate catabolism 29.8 2.6E+02 0.0057 29.0 8.5 85 207-301 95-180 (538)
315 TIGR02826 RNR_activ_nrdG3 anae 29.5 98 0.0021 26.1 4.5 26 205-230 74-99 (147)
316 PRK05752 uroporphyrinogen-III 29.1 3.4E+02 0.0074 24.7 8.5 23 203-225 10-32 (255)
317 smart00540 LEM in nuclear memb 28.3 56 0.0012 21.7 2.2 32 209-240 9-40 (44)
318 PRK03692 putative UDP-N-acetyl 28.0 2.1E+02 0.0046 26.3 6.8 81 208-292 94-177 (243)
319 cd06533 Glyco_transf_WecG_TagA 27.4 2.5E+02 0.0055 24.0 6.9 82 208-292 35-119 (171)
320 PLN02580 trehalose-phosphatase 27.3 89 0.0019 30.9 4.4 39 202-241 140-178 (384)
321 COG0156 BioF 7-keto-8-aminopel 27.2 71 0.0015 31.6 3.7 226 47-303 104-355 (388)
322 PRK11303 DNA-binding transcrip 27.2 4.5E+02 0.0097 24.4 9.2 22 206-227 165-187 (328)
323 COG0381 WecB UDP-N-acetylgluco 26.2 2.2E+02 0.0047 28.2 6.7 89 208-300 19-122 (383)
324 TIGR03590 PseG pseudaminic aci 26.1 5.3E+02 0.011 23.9 12.6 130 210-349 22-161 (279)
325 PF04413 Glycos_transf_N: 3-De 26.0 4.1E+02 0.0089 23.1 8.0 89 208-305 37-129 (186)
326 PRK08649 inosine 5-monophospha 25.7 6.4E+02 0.014 24.7 10.8 86 207-300 119-214 (368)
327 smart00052 EAL Putative diguan 25.5 2.9E+02 0.0064 24.1 7.3 84 208-298 135-228 (241)
328 cd05015 SIS_PGI_1 Phosphogluco 25.0 4.2E+02 0.009 22.3 9.7 81 218-299 48-135 (158)
329 TIGR00289 conserved hypothetic 24.6 4.5E+02 0.0098 23.8 8.2 85 214-300 53-139 (222)
330 TIGR03365 Bsubt_queE 7-cyano-7 24.5 72 0.0016 29.1 3.1 28 204-231 85-112 (238)
331 PRK05301 pyrroloquinoline quin 24.3 1.3E+02 0.0029 29.2 5.1 95 203-300 74-188 (378)
332 TIGR02886 spore_II_AA anti-sig 23.7 1.5E+02 0.0034 22.6 4.5 36 210-247 62-97 (106)
333 KOG1359 Glycine C-acetyltransf 23.7 2.1E+02 0.0045 27.5 5.8 93 204-302 272-376 (417)
334 PF04123 DUF373: Domain of unk 23.6 2.3E+02 0.005 27.6 6.4 69 210-300 55-127 (344)
335 KOG1605 TFIIF-interacting CTD 23.5 16 0.00035 34.1 -1.5 94 203-298 131-225 (262)
336 PLN02334 ribulose-phosphate 3- 23.5 5.4E+02 0.012 23.0 10.6 95 206-301 102-202 (229)
337 PF06437 ISN1: IMP-specific 5' 23.3 65 0.0014 31.7 2.5 37 90-132 124-161 (408)
338 TIGR01668 YqeG_hyp_ppase HAD s 22.8 47 0.001 28.5 1.4 16 118-133 24-40 (170)
339 KOG1154 Gamma-glutamyl kinase 22.8 2.4E+02 0.0052 26.1 5.9 85 208-292 37-133 (285)
340 PLN02151 trehalose-phosphatase 22.8 1.2E+02 0.0025 29.7 4.2 36 203-239 120-155 (354)
341 TIGR02109 PQQ_syn_pqqE coenzym 22.7 1.6E+02 0.0034 28.4 5.2 41 203-243 65-107 (358)
342 TIGR00696 wecB_tagA_cpsF bacte 22.6 4.1E+02 0.0089 23.0 7.3 81 208-292 37-120 (177)
343 PRK02947 hypothetical protein; 22.4 4.9E+02 0.011 23.7 8.2 42 263-304 95-143 (246)
344 PRK11302 DNA-binding transcrip 22.2 6.1E+02 0.013 23.2 12.4 98 205-316 115-223 (284)
345 cd07043 STAS_anti-anti-sigma_f 21.9 1.8E+02 0.0038 21.5 4.4 38 208-247 59-96 (99)
346 PF00389 2-Hacid_dh: D-isomer 21.8 4.2E+02 0.0091 21.2 8.4 85 205-305 8-94 (133)
347 PLN03017 trehalose-phosphatase 21.8 1.3E+02 0.0028 29.6 4.3 35 203-238 133-167 (366)
348 cd06423 CESA_like CESA_like is 21.6 4.1E+02 0.0089 21.0 7.7 73 208-282 12-87 (180)
349 TIGR02668 moaA_archaeal probab 21.5 2.4E+02 0.0052 26.4 6.1 40 203-242 68-109 (302)
350 TIGR00377 ant_ant_sig anti-ant 21.5 1.6E+02 0.0035 22.4 4.2 38 209-248 65-102 (108)
351 PRK11382 frlB fructoselysine-6 21.2 5.3E+02 0.011 24.7 8.5 46 272-317 90-142 (340)
352 PF00875 DNA_photolyase: DNA p 21.2 1.9E+02 0.0041 24.3 4.9 46 205-254 52-97 (165)
353 PF02593 dTMP_synthase: Thymid 21.2 95 0.0021 28.1 3.0 95 203-299 59-159 (217)
354 PRK06100 DNA polymerase III su 21.1 4.5E+02 0.0097 21.8 6.8 74 248-323 41-115 (132)
355 COG1834 N-Dimethylarginine dim 20.9 4.5E+02 0.0098 24.6 7.5 70 209-292 41-146 (267)
356 PRK08304 stage V sporulation p 20.7 1.6E+02 0.0035 28.5 4.6 64 241-304 33-111 (337)
357 TIGR02765 crypto_DASH cryptoch 20.6 2.8E+02 0.006 27.6 6.6 65 205-273 60-127 (429)
358 TIGR02151 IPP_isom_2 isopenten 20.3 3.3E+02 0.0071 26.2 6.8 66 276-341 256-324 (333)
359 PF05116 S6PP: Sucrose-6F-phos 20.2 1.6E+02 0.0035 26.9 4.5 43 210-253 26-68 (247)
360 PRK06856 DNA polymerase III su 20.2 4.8E+02 0.01 21.4 6.8 103 215-323 8-111 (128)
361 cd01948 EAL EAL domain. This d 20.2 3.1E+02 0.0067 24.0 6.3 85 207-298 133-227 (240)
362 PF05550 Peptidase_C53: Pestiv 20.1 81 0.0018 26.5 2.1 59 31-89 39-109 (168)
363 TIGR02193 heptsyl_trn_I lipopo 20.0 7.1E+02 0.015 23.1 9.3 88 205-308 197-287 (319)
No 1
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=100.00 E-value=2.9e-31 Score=256.08 Aligned_cols=244 Identities=29% Similarity=0.498 Sum_probs=203.0
Q ss_pred CCcccchhhhHHHHHHhHHHHHhhhcCCCCceEEEEece-eccccHH-HHHHHHHHHHHHhCCCCCchHHHHHHHhcCCH
Q 018088 89 GPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADTRA-LKLNAWKQLAFEEGKEIPQEGDVLRQILNAGA 166 (361)
Q Consensus 89 g~l~~dv~~~~~~~~~~~~~rir~~m~~~~~k~VIFDlD-TL~ds~~-~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~ 166 (361)
...+.|.+.+.+-+- ..+|| ...+++|||||| ||+|+.. .+..+|.++++++|++.+.. .....+.|.+.
T Consensus 108 ~~~~~~~~~~~~~~~--~~~~~-----~~~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~-e~~~~~~G~~~ 179 (381)
T PLN02575 108 PENRADNPSLHNPLL--RQERM-----GCGWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPA-FILRRVEGMKN 179 (381)
T ss_pred CCCccccccccCHHH--HHHhc-----cCCCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHH-HHHHHhcCCCH
Confidence 345566665555331 13342 234899999999 9999987 66689999999999876543 34456778888
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc
Q 018088 167 DHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF 246 (361)
Q Consensus 167 ~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F 246 (361)
...+..++.+..+...++.+...+.+.|.+.......++||+.++|+.|+++|++++|+||+.+..+...++.+|+..||
T Consensus 180 ~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yF 259 (381)
T PLN02575 180 EQAISEVLCWSRDPAELRRMATRKEEIYQALQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFF 259 (381)
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHc
Confidence 88888877665566667777777788777766556688999999999999999999999999999999999999999999
Q ss_pred ceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHH
Q 018088 247 QAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSV 324 (361)
Q Consensus 247 d~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~ 324 (361)
+.+++++++...| |++|..+++++|+.|++|+||||+..|+++|+++||.+|+|.+.+.......+|++++++.||..
T Consensus 260 d~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 260 SVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSI 339 (381)
T ss_pred eEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHH
Confidence 9999999976555 67999999999999999999999999999999999999999655555555679999999999999
Q ss_pred HHHHhhHhcCCCChhh
Q 018088 325 INLRRLFANKGSTFME 340 (361)
Q Consensus 325 ~ll~~l~~~~~~~~~~ 340 (361)
..++.+++..++||=-
T Consensus 340 ~~l~~l~~~~~~~~~~ 355 (381)
T PLN02575 340 VDLKNLADIESPEFGP 355 (381)
T ss_pred HHHhhhhhcCccccCC
Confidence 9999999999999833
No 2
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.97 E-value=3.9e-30 Score=239.24 Aligned_cols=224 Identities=29% Similarity=0.499 Sum_probs=187.0
Q ss_pred CCCceEEEEece-eccccH-HHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTR-ALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQL 193 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~-~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~ 193 (361)
...+++|||||| ||+|+. ..+..+|.++++++|++.+.. ...+.+.|.+....+..++.+.........+...+...
T Consensus 21 ~~~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~-e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~ 99 (260)
T PLN03243 21 GCGWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPA-FLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDL 99 (260)
T ss_pred cCCceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHH-HHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence 345899999999 999995 677889999999999876543 33455778888888877766544444455555555555
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
+.........++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.+++++++..+| |++|..+++++|
T Consensus 100 ~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~ 179 (260)
T PLN03243 100 YEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLG 179 (260)
T ss_pred HHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhC
Confidence 543333456789999999999999999999999999999999999999999999999999886555 679999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhhHhcCCCChhh
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGSTFME 340 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l~~~~~~~~~~ 340 (361)
+.|++|+||||+..|+.+|+++||.+|+|.+......+..+|++++++.+|....+..|..-...||-=
T Consensus 180 ~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~~~~~~~~~~~~~~~~ 248 (260)
T PLN03243 180 FIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVVDLKNLSDLDSPEFQI 248 (260)
T ss_pred CChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHHHHhhhhccCCccccC
Confidence 999999999999999999999999999998766666666799999999999999999987777777744
No 3
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.97 E-value=7.2e-29 Score=229.60 Aligned_cols=205 Identities=17% Similarity=0.229 Sum_probs=163.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCC--Cc-hHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEI--PQ-EGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQL 193 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~--~~-~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~ 193 (361)
++++|||||| ||+|+...+..+|.++++++|... +. .+...+.+.|.+....+..++... ......+...+...
T Consensus 21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 98 (248)
T PLN02770 21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDD--LERGLKFTDDKEAL 98 (248)
T ss_pred ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcc--hhhHHHHHHHHHHH
Confidence 3789999999 999999999999999999997531 22 222344556777777776654432 12222333444555
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
|.........++||+.++|+.|+++|++++|+||+.+..+...++++|+.++|+.+++++++..+| |++|..+++++|
T Consensus 99 y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~ 178 (248)
T PLN02770 99 FRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLK 178 (248)
T ss_pred HHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhC
Confidence 555444556889999999999999999999999999999999999999999999999999987666 579999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccc--cCcceEeCChhhhHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDL--VQADLAVANFNELSV 324 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l--~~ad~vi~sl~EL~~ 324 (361)
++|++|+||||+..|+++|+++|+.+|+|........+ .++++++.++.|+..
T Consensus 179 ~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~~~ 233 (248)
T PLN02770 179 VSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDPKL 233 (248)
T ss_pred CChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhhHH
Confidence 99999999999999999999999999999433333333 369999999999653
No 4
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.96 E-value=6.4e-28 Score=218.10 Aligned_cols=203 Identities=15% Similarity=0.220 Sum_probs=164.7
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
++++||||+| ||+|+...+..+|.++++++|......+ ......|.+....+..+ .....+.+...+...+..
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~G~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 75 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKRE-DVLPFIGPSLHDTFSKI-----DESKVEEMITTYREFNHE 75 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHH-HHHHHhCcCHHHHHHhc-----CHHHHHHHHHHHHHHHHH
Confidence 3789999999 9999999999999999999986532222 33455677766666543 223344444445554444
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.......++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++...| |+.|..++++++++|
T Consensus 76 ~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 155 (214)
T PRK13288 76 HHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKP 155 (214)
T ss_pred hhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH
Confidence 444456889999999999999999999999999999999999999999999999999876555 689999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~l 326 (361)
++|++|||+.+|+++|+++|+.+|+| ++......+ .+++++++++.++..++
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 99999999999999999999999999 554444433 36999999999998864
No 5
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=1.1e-27 Score=219.08 Aligned_cols=205 Identities=20% Similarity=0.221 Sum_probs=166.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++|||||| ||+|+...+..+|..+++++|.+....+ ......|.+....+...... .......++...+.+.|.+.
T Consensus 12 ~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 89 (229)
T PRK13226 12 PRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLA-QLRPVVSKGARAMLAVAFPE-LDAAARDALIPEFLQRYEAL 89 (229)
T ss_pred CCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHH-HHHHHhhhHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHh
Confidence 689999999 9999999999999999999998643332 33445566666666554332 23444455556666666665
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++...| |++|.++++++|++|+
T Consensus 90 ~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~ 169 (229)
T PRK13226 90 IGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPT 169 (229)
T ss_pred hhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChh
Confidence 55556889999999999999999999999999999999999999999999999988765555 6799999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEE-eCCCCc-cc--ccCcceEeCChhhhHHH
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGL-IGAHRA-YD--LVQADLAVANFNELSVI 325 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~-~~--l~~ad~vi~sl~EL~~~ 325 (361)
+|++|||+.+|+.+|+++|+.+|+| +|.... .. ..+++++++++.||..+
T Consensus 170 ~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 170 DCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred hEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999999999999999999999998 554322 22 24699999999999765
No 6
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.96 E-value=1.7e-27 Score=216.53 Aligned_cols=207 Identities=25% Similarity=0.346 Sum_probs=170.1
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChH---HHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEES---ELDRLNSRLTQL 193 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~---~~~~l~~~~~~~ 193 (361)
.++.|+||+| ||+|+...+..+++.+++++|.+.... .....+.|.+....+...+....... ..+.+...+...
T Consensus 3 ~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (220)
T COG0546 3 MIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDE-EEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA 81 (220)
T ss_pred CCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCH-HHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999885333 34566778888888888766554443 333344444444
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
+.+.. ...++||+.++|..|++.|++++|+||.....+...++++|+..+|+.+++.++...+| |+.+..+++++|
T Consensus 82 ~~~~~--~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 82 YAELL--ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred HHhhc--cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 44433 35789999999999999999999999999999999999999999999999977777776 568899999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCccc--ccCcceEeCChhhhHHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYD--LVQADLAVANFNELSVINL 327 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~--l~~ad~vi~sl~EL~~~ll 327 (361)
++|++++||||+.+|+.||++||+.+|+| +|...... ..++|+++.++.||..++.
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 99889999999999999999999999998 55432233 3469999999999987754
No 7
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=2.1e-27 Score=222.31 Aligned_cols=207 Identities=18% Similarity=0.233 Sum_probs=168.6
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~ 194 (361)
|+.+++|||||| ||+|++..+..+|.++++++|.+....+ ....+.+.....++... +.+.....++...+.+.+
T Consensus 59 ~~~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~-~~~~~~g~~~~~i~~~~---~~~~~~~~~~~~~~~~~~ 134 (273)
T PRK13225 59 PQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDER-DYAQLRQWSSRTIVRRA---GLSPWQQARLLQRVQRQL 134 (273)
T ss_pred hhhcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHH-HHHHHhCccHHHHHHHc---CCCHHHHHHHHHHHHHHH
Confidence 556899999999 9999999999999999999998644333 34455666666665552 233344455555555555
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCC
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKP 274 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p 274 (361)
.+. ....+++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+.++++++. ..||+.+..+++++++.|
T Consensus 135 ~~~-~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~-~~k~~~~~~~l~~~~~~p 212 (273)
T PRK13225 135 GDC-LPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI-LSKRRALSQLVAREGWQP 212 (273)
T ss_pred Hhh-cccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC-CCCHHHHHHHHHHhCcCh
Confidence 443 345688999999999999999999999999999999999999999999998888765 468999999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVINLR 328 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ll~ 328 (361)
++|++|||+.+|+.+|+++|+.+|+| +|.+....+ ..||++++++.+|..++.+
T Consensus 213 ~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~~ 269 (273)
T PRK13225 213 AAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVTQ 269 (273)
T ss_pred hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHHH
Confidence 99999999999999999999999999 444444433 3699999999999987633
No 8
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.96 E-value=2.1e-27 Score=214.09 Aligned_cols=203 Identities=20% Similarity=0.267 Sum_probs=165.6
Q ss_pred EEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHHHHh
Q 018088 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~~~~ 197 (361)
|||||| ||+|+...+..+|.++++++|.+...... .....|.+....+..++.. ..+......+...+...|.+.
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLAR-VIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEV 79 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHH-HHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHh
Confidence 689999 99999999999999999999986433333 3344577766666665432 223444556666666666666
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPS 275 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~ 275 (361)
......++||+.++|+.|+++|++++|+||+....+...++++|+.++|+.+++++++...| |++|..+++++|++|+
T Consensus 80 ~~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 80 AGELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 55556899999999999999999999999999999999999999999999999998876555 6899999999999999
Q ss_pred cEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHH
Q 018088 276 KCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+|++|||+.+|+.+|+++|+.+++| +|.+....+ ..|++++.++.||..+
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 9999999999999999999999999 444443333 3699999999998754
No 9
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.96 E-value=1.3e-27 Score=217.33 Aligned_cols=210 Identities=20% Similarity=0.254 Sum_probs=164.8
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccC-CChHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWG-KEESELDRLNSRLTQL 193 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~-~~~~~~~~l~~~~~~~ 193 (361)
...+++|+||+| ||+|+...+..++.++++++|.+...... .....|...+.......... ............+.+.
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREE-LPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIAR 82 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHH-HHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 445899999999 99999999999999999999987654333 33455666555554432211 1111222333444444
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
+.+.......++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++++..+| |+.|+.+++++|
T Consensus 83 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 162 (222)
T PRK10826 83 VISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLG 162 (222)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcC
Confidence 444444556899999999999999999999999999999999999999999999999999876555 679999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc--cccCcceEeCChhhhHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY--DLVQADLAVANFNELSVIN 326 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~--~l~~ad~vi~sl~EL~~~l 326 (361)
+.|++|++|||+.+|+++|++||+.+|++....... ....+++++.++.+|....
T Consensus 163 ~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~~~ 219 (222)
T PRK10826 163 VDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTAAD 219 (222)
T ss_pred CCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhhhh
Confidence 999999999999999999999999999996554332 2346899999999987653
No 10
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.96 E-value=4.7e-28 Score=220.32 Aligned_cols=205 Identities=31% Similarity=0.454 Sum_probs=156.1
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCCh--HHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEE--SELDRLNSRLTQLYY 195 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~--~~~~~l~~~~~~~~~ 195 (361)
+++|||||| ||+|++..+.++|.++++++|+..+.+ ......|......+..+....... ........ ......
T Consensus 2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 78 (221)
T COG0637 2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDE--EIRELHGGGIARIIDLLRKLAAGEDPADLAELER-LLYEAE 78 (221)
T ss_pred CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHH--HHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHH-HHHHHH
Confidence 689999999 999999999999999999999887654 233445554444333332221111 11111111 111222
Q ss_pred HhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCC
Q 018088 196 DNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRK 273 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~ 273 (361)
.......+++||+.++|..|+++|++++++|++.+..+...|+.+|+.++|+.+++++++..+| |++|+.+++++|+.
T Consensus 79 ~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~ 158 (221)
T COG0637 79 ALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVD 158 (221)
T ss_pred HhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCC
Confidence 2333556899999999999999999999999999999999999999999999999999988777 58999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-----cccCcceEeCChhhhHHHH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-----DLVQADLAVANFNELSVIN 326 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-----~l~~ad~vi~sl~EL~~~l 326 (361)
|++||+|+|+++++.+|++|||.+|+|.+.+... ....++.+..++.++...+
T Consensus 159 P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 216 (221)
T COG0637 159 PEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPALL 216 (221)
T ss_pred hHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhccHHHHHHHH
Confidence 9999999999999999999999999996644421 1124566666666666543
No 11
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=6.6e-27 Score=212.55 Aligned_cols=216 Identities=23% Similarity=0.314 Sum_probs=178.3
Q ss_pred cCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHH
Q 018088 114 MKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSR 189 (361)
Q Consensus 114 m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~ 189 (361)
|..+++++|+||+| ||+|+...+..+|..+++++|.+..... ......+.+....+...+.+ .............
T Consensus 1 ~~~~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (226)
T PRK13222 1 MKFMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEE-RVRTWVGNGADVLVERALTWAGREPDEELLEKLREL 79 (226)
T ss_pred CCCCcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHH-HHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHH
Confidence 45567899999999 9999999999999999999998754433 33456677777777665543 3455666777777
Q ss_pred HHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHH
Q 018088 190 LTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAA 267 (361)
Q Consensus 190 ~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~ 267 (361)
+.+.|.........++||+.++|+.|++.|++++++||+....+..+++.+|+..+|+.++++++....| |++|..++
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~ 159 (226)
T PRK13222 80 FDRHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLAC 159 (226)
T ss_pred HHHHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHH
Confidence 7777777665567899999999999999999999999999999999999999999999999998865554 68999999
Q ss_pred HHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc--cCcceEeCChhhhHHHHHHhh
Q 018088 268 VKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL--VQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 268 ~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~ll~~l 330 (361)
++++++|++|++|||+.+|+++|+++|+.+|+|. |.....+. ..+++++.++.+|..++.+.|
T Consensus 160 ~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~~~ 225 (226)
T PRK13222 160 EKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGLAL 225 (226)
T ss_pred HHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHHhc
Confidence 9999999999999999999999999999999994 43322222 469999999999998876654
No 12
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.96 E-value=1.9e-27 Score=220.56 Aligned_cols=205 Identities=20% Similarity=0.271 Sum_probs=160.6
Q ss_pred ceEEEEece-eccccHHH-HHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHH-------------HccCCChHHH
Q 018088 119 AYGLIFSWD-VVADTRAL-KLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKV-------------LLWGKEESEL 183 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~-------------l~~~~~~~~~ 183 (361)
+++|||||| ||+|+... +..+|.++++++|.+.+.. ......|.+....+... ++.......+
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLE--EARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADI 79 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHH--HHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHH
Confidence 689999999 99998653 5789999999999765433 22334555543333221 2223344455
Q ss_pred HHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCCCCC--h
Q 018088 184 DRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGMESM--A 260 (361)
Q Consensus 184 ~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~~~K--P 260 (361)
..+...+...+.+.......++||+.++|+.|+++|++++|+||+....+...++.+|+..+| +.+++++++...| |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p 159 (253)
T TIGR01422 80 EAIYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAP 159 (253)
T ss_pred HHHHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCH
Confidence 566666666555555556789999999999999999999999999999999999999999986 9999999876655 6
Q ss_pred HHHHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC-----------------------cccc--cCcc
Q 018088 261 HRFLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR-----------------------AYDL--VQAD 313 (361)
Q Consensus 261 ~~~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~-----------------------~~~l--~~ad 313 (361)
++|..+++++|+. |++|+||||+++|+.+|++||+.+|+| +|.+. ...+ .+||
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 239 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAH 239 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCC
Confidence 7999999999995 999999999999999999999999999 45431 1233 3699
Q ss_pred eEeCChhhhHHH
Q 018088 314 LAVANFNELSVI 325 (361)
Q Consensus 314 ~vi~sl~EL~~~ 325 (361)
++++++.||..+
T Consensus 240 ~v~~~~~el~~~ 251 (253)
T TIGR01422 240 YVIDTLAELPAV 251 (253)
T ss_pred EehhcHHHHHHh
Confidence 999999998765
No 13
>PRK11587 putative phosphatase; Provisional
Probab=99.96 E-value=3e-27 Score=214.53 Aligned_cols=200 Identities=21% Similarity=0.281 Sum_probs=157.0
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+++|||||| ||+|+...+..+|.++++++|++. . .....+.|.+....++.+.. ......+......+ ..+..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~--~-~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~ 76 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP--D-EVLNFIHGKQAITSLRHFMA-GASEAEIQAEFTRL-EQIEA 76 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH--H-HHHHHHcCCCHHHHHHHHhc-cCCcHHHHHHHHHH-HHHHH
Confidence 3789999999 999999999999999999999754 2 33445567777777766543 22333332222221 12223
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.......++||+.++|+.|+++|++++|+||+........++..++ .+|+.+++++++...| |+.|..+++++|+.|
T Consensus 77 ~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p 155 (218)
T PRK11587 77 TDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAP 155 (218)
T ss_pred hhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCc
Confidence 3334568899999999999999999999999988888888888998 5678899988776555 579999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
++|+||||+..|+++|+++|+.+|+|...........++++++++.||.
T Consensus 156 ~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 156 QECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999955443344457999999999975
No 14
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.95 E-value=7.5e-27 Score=211.81 Aligned_cols=206 Identities=20% Similarity=0.252 Sum_probs=167.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-CCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-GKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~~~~~~~~l~~~~~~~~~~ 196 (361)
+++|||||| ||+|+...+..+|.++++++|.+.+.. .....+.|......+..++.. +.......+....+.+.+..
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPE-EVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAE 79 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHH-HHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 478999999 999999999999999999999876543 233336677777777776543 23444455556666666555
Q ss_pred hcc-cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--cccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 197 NLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--KYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 197 ~l~-~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
... ....++||+.++|+.|+++|++++|+||+....+...++.+|+. .+|+.++++++....| |++|..+++++|
T Consensus 80 ~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 80 AYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred HhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 433 24579999999999999999999999999999999999999998 9999999999876555 689999999999
Q ss_pred CC-CCcEEEEcCChHHHHHHHHcCCeE-EEEe-CCCCcccc--cCcceEeCChhhhHHH
Q 018088 272 RK-PSKCVVFEDDPRAITAAHNCTMMA-VGLI-GAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 272 i~-p~~~v~IGDs~~Di~aA~~aG~~~-v~V~-g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+. |++|+||||+.+|+.+|+++|+.+ +++. +......+ .++++++.++.+|..+
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 97 799999999999999999999999 8884 33343333 3689999999998765
No 15
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.95 E-value=1.3e-26 Score=216.65 Aligned_cols=207 Identities=20% Similarity=0.277 Sum_probs=160.3
Q ss_pred CceEEEEece-eccccHHH-HHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHH-------------HHccCCChHH
Q 018088 118 EAYGLIFSWD-VVADTRAL-KLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHK-------------VLLWGKEESE 182 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~-~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~-------------~l~~~~~~~~ 182 (361)
++++|||||| ||+|+... +..+|.++++++|.+.+.. ......|.+....+.. .++.......
T Consensus 3 ~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (267)
T PRK13478 3 KIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLE--EARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80 (267)
T ss_pred ceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHH--HHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHH
Confidence 3799999999 99998643 4789999999999865432 2234455544332222 2222234445
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCCCCCC--
Q 018088 183 LDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDGMESM-- 259 (361)
Q Consensus 183 ~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~~~~K-- 259 (361)
+.++...+...+.+.......++||+.++|+.|+++|++++|+||.....+...++.+++.++| +.+++++++...|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~ 160 (267)
T PRK13478 81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPY 160 (267)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCC
Confidence 5556666666655555556689999999999999999999999999999999999999988875 8999998876655
Q ss_pred hHHHHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC-----------------------cccc--cCc
Q 018088 260 AHRFLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR-----------------------AYDL--VQA 312 (361)
Q Consensus 260 P~~~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~-----------------------~~~l--~~a 312 (361)
|++|..+++++|+. |++|+||||+++|+.+|+++|+.+|+| +|.+. ...+ .+|
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 67999999999996 699999999999999999999999999 44432 1222 369
Q ss_pred ceEeCChhhhHHHH
Q 018088 313 DLAVANFNELSVIN 326 (361)
Q Consensus 313 d~vi~sl~EL~~~l 326 (361)
|++++++.+|..++
T Consensus 241 ~~vi~~~~~l~~~l 254 (267)
T PRK13478 241 HYVIDTIADLPAVI 254 (267)
T ss_pred CeehhhHHHHHHHH
Confidence 99999999998765
No 16
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.95 E-value=5.9e-26 Score=214.23 Aligned_cols=217 Identities=21% Similarity=0.242 Sum_probs=160.1
Q ss_pred CCCCceEEEEece-eccccH-HHHHHHHHHHHHHhCCC-CCchHHHHH--HHhcCCHHHHHHHHH--ccC--------CC
Q 018088 115 KPDEAYGLIFSWD-VVADTR-ALKLNAWKQLAFEEGKE-IPQEGDVLR--QILNAGADHVLHKVL--LWG--------KE 179 (361)
Q Consensus 115 ~~~~~k~VIFDlD-TL~ds~-~~~~~a~~~~l~~~G~~-~~~~~~~~~--~~~g~~~~~~l~~~l--~~~--------~~ 179 (361)
....+++|||||| ||+|+. ..+..+|.++++++|++ .+....... ...|.+...+...+. .+. .+
T Consensus 36 ~~~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (286)
T PLN02779 36 ASALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYFNENGWPTSTIEKAPKD 115 (286)
T ss_pred cccCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHHHHcCCCccccccCCcc
Confidence 3456899999999 999999 99999999999999983 333222211 114444444433321 111 11
Q ss_pred hHHH----HHHHHHHHHHHHHhcccC-CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc---ceeEe
Q 018088 180 ESEL----DRLNSRLTQLYYDNLLSV-TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF---QAIVS 251 (361)
Q Consensus 180 ~~~~----~~l~~~~~~~~~~~l~~~-~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F---d~iv~ 251 (361)
.+.. ..+.......|.+..... ..++||+.++|+.|+++|++++|+||+....+...++.++...+| +.+ +
T Consensus 116 ~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~ 194 (286)
T PLN02779 116 EEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-A 194 (286)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-e
Confidence 2222 223333344454443322 478999999999999999999999999999999999887443444 444 7
Q ss_pred cCCCCCCC--hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 252 EEDGMESM--AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 252 ~e~~~~~K--P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
++++...| |++|..+++++|++|++|+||||+.+|+++|+++|+.+|+| +|.+...++..+|++++++.++....++
T Consensus 195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~~~~ 274 (286)
T PLN02779 195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLEDFD 274 (286)
T ss_pred ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchhhhH
Confidence 77766556 57999999999999999999999999999999999999999 5545555566799999999999988888
Q ss_pred hhHh
Q 018088 329 RLFA 332 (361)
Q Consensus 329 ~l~~ 332 (361)
.||-
T Consensus 275 ~~~~ 278 (286)
T PLN02779 275 LLFC 278 (286)
T ss_pred HHHH
Confidence 8763
No 17
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.95 E-value=1.1e-25 Score=211.12 Aligned_cols=206 Identities=17% Similarity=0.224 Sum_probs=165.9
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-----CCChHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-----GKEESELDRLNSRLT 191 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-----~~~~~~~~~l~~~~~ 191 (361)
-+++|||||| ||+|+...+..++.++++++|.+....+. ...+.+.+...++...+.. ..+..........+.
T Consensus 12 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
T PRK13223 12 LPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEA-VRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFM 90 (272)
T ss_pred cCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHH-HHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence 4789999999 99999999999999999999987654332 3455677766666654431 233444555555555
Q ss_pred HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHH
Q 018088 192 QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVK 269 (361)
Q Consensus 192 ~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~k 269 (361)
+.|.... ....++||+.++|+.|+++|++++|+||++...+...++.+++..+|+.++++++....| |+.|+.++++
T Consensus 91 ~~~~~~~-~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~ 169 (272)
T PRK13223 91 EAYADSH-ELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKM 169 (272)
T ss_pred HHHHhcC-cCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHH
Confidence 5555432 335789999999999999999999999999999999999999999999999998876555 5799999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHH
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+|+.|++|++|||+.+|+++|+++|+.+++| +|......+ .++|++++++.||..+
T Consensus 170 ~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 170 AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999998 444444333 3699999999998754
No 18
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.94 E-value=4.9e-26 Score=206.68 Aligned_cols=205 Identities=17% Similarity=0.199 Sum_probs=154.4
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++|+||+| ||+|+...+.++|.++++++|++.... .....+.|......+..+..........+.+...+.+.+...
T Consensus 4 ~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (221)
T PRK10563 4 IEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLE-EVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVARL 82 (221)
T ss_pred CCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHH-HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 789999999 999999999999999999999875433 344555666666666665432111111122222333333332
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc-eeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ-AIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd-~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
......++||+.++|+.|+ ++++|+||+....+...++.+|+..+|+ .+++++++...| |++|..+++++|++|
T Consensus 83 ~~~~~~~~~gv~~~L~~L~---~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p 159 (221)
T PRK10563 83 FDSELEPIAGANALLESIT---VPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNV 159 (221)
T ss_pred HHccCCcCCCHHHHHHHcC---CCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCH
Confidence 2345688999999999993 8999999999999999999999999996 678887766555 689999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
++|++|||++.|+++|+++|+.+|++. +.+.......++.++.++.||..++.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 160 ENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWK 213 (221)
T ss_pred HHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999883 33332222345667888888876544
No 19
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.94 E-value=2.5e-25 Score=199.78 Aligned_cols=195 Identities=19% Similarity=0.236 Sum_probs=154.6
Q ss_pred EEEece-eccccHHHHHHHHHHHHHHh-CCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 122 LIFSWD-VVADTRALKLNAWKQLAFEE-GKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~~l~~~-G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|||||| ||+|+...+.++|.++++++ |.+.... .......|......+..+ + .+........ ...+ . ..
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~-~--~~~~~~~~~~---~~~~-~-~~ 71 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPF-EEYRRHLGRYFPDIMRIM-G--LPLEMEEPFV---RESY-R-LA 71 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCH-HHHHHHhCccHHHHHHHc-C--CCHHHHHHHH---HHHH-H-hh
Confidence 689999 99999999999999999884 7643322 234555677666666542 2 2211111111 1112 1 23
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
....++||+.++|+.|+++|++++|+||+....+...++.+|+.++|+.++++++...+| |+.|..+++++|++|++|
T Consensus 72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 456889999999999999999999999999999999999999999999999998865444 679999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEE-eCCCCcccc--cCcceEeCChhhhHHH
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDL--VQADLAVANFNELSVI 325 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l--~~ad~vi~sl~EL~~~ 325 (361)
+||||+.+|+.+|+++|+.+|++ +|.+...++ .+++++++++.||..+
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~ 202 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLAL 202 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHH
Confidence 99999999999999999999988 666555554 3699999999998765
No 20
>PLN02940 riboflavin kinase
Probab=99.94 E-value=1.4e-25 Score=219.59 Aligned_cols=206 Identities=19% Similarity=0.256 Sum_probs=162.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+++||||+| ||+|+...+..+|.++++++|.+.+.. ......|......+..++..........++...+.+.+.+
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~--~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGR--EAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSE 87 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHH--HHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3899999999 999999999999999999999875433 2345667766666665544321111222333333333333
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHH-hCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE-RMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRK 273 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~-~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~ 273 (361)
.. ....++||+.++|+.|+++|++++|+||+....+...++ ..|+.++||.+++++++..+| |++|..+++++|++
T Consensus 88 ~~-~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~ 166 (382)
T PLN02940 88 QW-CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVE 166 (382)
T ss_pred HH-ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCC
Confidence 32 345789999999999999999999999999999999987 789999999999999987666 57999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeCChhhhHHHH
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
|++|++|||+..|+++|+++|+.+|+|.. .........+++++.++.|+...-
T Consensus 167 p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~ 220 (382)
T PLN02940 167 PSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEK 220 (382)
T ss_pred hhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHH
Confidence 99999999999999999999999999943 322334457999999999987543
No 21
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.94 E-value=3.6e-25 Score=195.02 Aligned_cols=178 Identities=30% Similarity=0.471 Sum_probs=148.2
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLY 194 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~ 194 (361)
+++|+||+| ||+|+...+..+|.++++++|.+.+ ......+.|......+..++.. ..+...+..+...+...+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFD--KQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELY 78 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCC--HHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 478999999 9999999999999999999998754 2334455666666666665543 355666666666666666
Q ss_pred HHhc-ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcC
Q 018088 195 YDNL-LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 195 ~~~l-~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klg 271 (361)
.+.+ .....++||+.++|+.|+++|++++++||+ ..+...++.+|+.++|+.++++++....| |++|..+++++|
T Consensus 79 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~ 156 (185)
T TIGR02009 79 RELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLG 156 (185)
T ss_pred HHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcC
Confidence 5554 244689999999999999999999999998 77899999999999999999998876665 579999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
++|++|++|||+..|+++|+++|+.+|+|
T Consensus 157 ~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 157 VSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999875
No 22
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.93 E-value=1.1e-24 Score=218.69 Aligned_cols=207 Identities=16% Similarity=0.100 Sum_probs=161.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCC----CCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGK----EIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQ 192 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~----~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~ 192 (361)
.+++|||||| ||+|++..+..+|.+++++++. ...........+.|.+....+..+.... .....+.....+.+
T Consensus 240 m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 318 (459)
T PRK06698 240 MLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDH-SLEIREQTDAYFLE 318 (459)
T ss_pred hhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhc-chhHHHHHHHHHHH
Confidence 4689999999 9999999999999999999841 1111223445667888777777754321 22222223333333
Q ss_pred HHHHhc-ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC-CCChHHHHHHHHHc
Q 018088 193 LYYDNL-LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM-ESMAHRFLSAAVKL 270 (361)
Q Consensus 193 ~~~~~l-~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~-~~KP~~~~~~~~kl 270 (361)
.+.+.+ ....+++||+.++|+.|+++|++++|+||+....+...++.+|+.+||+.+++++++. .+||++|..+++++
T Consensus 319 ~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l 398 (459)
T PRK06698 319 RLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKY 398 (459)
T ss_pred HhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhc
Confidence 333332 2345889999999999999999999999999999999999999999999999998874 57999999999887
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHHHH
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
+ |++|++|||+.+|+.+|+++|+.+|++. +.........+|++++++.||..++.
T Consensus 399 ~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~ 454 (459)
T PRK06698 399 D--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILS 454 (459)
T ss_pred C--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHH
Confidence 5 6899999999999999999999999994 43344455679999999999988653
No 23
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.93 E-value=7e-25 Score=193.88 Aligned_cols=180 Identities=26% Similarity=0.367 Sum_probs=142.4
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
++++||||+| ||+|+...+..+|.++++++|.+.+. .....+.|......+..+..........+.+...+...+..
T Consensus 4 ~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (188)
T PRK10725 4 RYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDE--QAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVKS 81 (188)
T ss_pred cceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCH--HHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3789999999 99999999999999999999986542 23455667766666665544322111112233333333444
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKP 274 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p 274 (361)
.......++|| .++|..|++. ++++|+||+....+...++++|+..||+.+++++++...| |++|..+++++|++|
T Consensus 82 ~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 159 (188)
T PRK10725 82 MLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQP 159 (188)
T ss_pred HHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCH
Confidence 43445577886 5899999876 8999999999999999999999999999999999887666 579999999999999
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
++||+|||+..|+++|+++|+.+|+|.
T Consensus 160 ~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 160 TQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999974
No 24
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.93 E-value=1.7e-24 Score=196.26 Aligned_cols=198 Identities=19% Similarity=0.259 Sum_probs=142.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHH---HHhCCCCCchHHHHHHHh------cC----CHHHHHHHHHccCCChHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLA---FEEGKEIPQEGDVLRQIL------NA----GADHVLHKVLLWGKEESELD 184 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l---~~~G~~~~~~~~~~~~~~------g~----~~~~~l~~~l~~~~~~~~~~ 184 (361)
+++|+||+| ||+|+...+..+|..+. .++|.+....+. ...+. +. .....+..+. .........
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEA-YEELLKLIKEYGSNYPTHFDYLIRRLW-EEYNPKLVA 79 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHH-HHHHHHHHHHhccccCcchHHHHHHHh-hhcCHHHHH
Confidence 689999999 99999988888877654 456766533322 11111 10 1111222111 111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 185 RLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 185 ~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
.....+.........++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.++++++++..| |++
T Consensus 80 ----~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~ 155 (221)
T TIGR02253 80 ----AFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKI 155 (221)
T ss_pred ----HHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHH
Confidence 11122222222345889999999999999999999999999999999999999999999999999987666 579
Q ss_pred HHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeCCCC-c---ccccCcceEeCChhhh
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIGAHR-A---YDLVQADLAVANFNEL 322 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g~~~-~---~~l~~ad~vi~sl~EL 322 (361)
|..+++++|++|++||+|||+. +|+.+|+++|+.+|+|..... . .....+++++.++.||
T Consensus 156 ~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 156 FYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 9999999999999999999998 899999999999999943332 2 1123589999999886
No 25
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.93 E-value=1e-24 Score=192.13 Aligned_cols=176 Identities=30% Similarity=0.463 Sum_probs=142.1
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc---CCChHHHHHHHHHHHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW---GKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~---~~~~~~~~~l~~~~~~~~~~ 196 (361)
+||||+| ||+|+...+..+|.++++++|++.+.. ....+.|.+....+..++.. ..+.....++...+...|..
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEE--FNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVE 78 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHH--HHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 5899999 999999999999999999999875432 34556666666666665432 33455555555555555544
Q ss_pred hcc--cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCC
Q 018088 197 NLL--SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDR 272 (361)
Q Consensus 197 ~l~--~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi 272 (361)
... ....++||+.++|+.|+++|++++|+||+. .....++.+|+..+|+.++++++....| |++|.++++++++
T Consensus 79 ~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~ 156 (185)
T TIGR01990 79 LLKELTPADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGV 156 (185)
T ss_pred HHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCC
Confidence 332 234789999999999999999999999874 3567899999999999999998876555 6799999999999
Q ss_pred CCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 273 KPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
+|++||+|||+.+|+.+|+++||.+|+|
T Consensus 157 ~~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 157 SPSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred CHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 9999999999999999999999999986
No 26
>PRK09449 dUMP phosphatase; Provisional
Probab=99.93 E-value=1.1e-24 Score=198.03 Aligned_cols=203 Identities=15% Similarity=0.179 Sum_probs=143.7
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHH-----HHH----
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELD-----RLN---- 187 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~-----~l~---- 187 (361)
++++|+||+| ||+|.. ...++.++++++|++.+... . ..+.+.+. ..+.............. .+.
T Consensus 2 ~~k~iiFDlDGTLid~~--~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T PRK09449 2 KYDWILFDADETLFHFD--AFAGLQRMFSRYGVDFTAED-F-QDYQAVNK-PLWVDYQNGAITALQLQHTRFESWAEKLN 76 (224)
T ss_pred CccEEEEcCCCchhcch--hhHHHHHHHHHhCCCCcHHH-H-HHHHHHHH-HHHHHHHcCCCCHHHHHHHHHHHHHHHcC
Confidence 3789999999 999854 45788899999997754322 1 12111111 11111111111111110 000
Q ss_pred ---HHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 188 ---SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 188 ---~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
..+.+.+.+.......++||+.++|+.|+ +|++++|+||+....+...++.+|+..+||.+++++++...| |++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~ 155 (224)
T PRK09449 77 VTPGELNSAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAI 155 (224)
T ss_pred CCHHHHHHHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHH
Confidence 11223333333334578999999999999 579999999999999999999999999999999999886666 579
Q ss_pred HHHHHHHcCCC-CCcEEEEcCCh-HHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHHH
Q 018088 263 FLSAAVKLDRK-PSKCVVFEDDP-RAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 263 ~~~~~~klgi~-p~~~v~IGDs~-~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
|..+++++|+. +++|++|||+. +|+.+|+++|+.+|++. +.........+|+++.++.||..++
T Consensus 156 ~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 156 FDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 99999999985 47999999998 69999999999999984 2222222236899999999998764
No 27
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.93 E-value=4e-24 Score=193.88 Aligned_cols=203 Identities=18% Similarity=0.191 Sum_probs=149.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHH-----HHHH-----
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESEL-----DRLN----- 187 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~-----~~l~----- 187 (361)
+++|+||+| ||+|+...+..++.++++++|++..... .....+.. ...+..+.......... ..+.
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDM--FAQYKEIN-QGLWRAYEEGKITKDEVVNTRFSALLKEYNT 77 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHH--HHHHHHHh-HHHHHHHHcCCCCHHHHHHHHHHHHHHHhCC
Confidence 478999999 9999999999999999999997653221 11111111 11111111111111110 0000
Q ss_pred ----HHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hH
Q 018088 188 ----SRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AH 261 (361)
Q Consensus 188 ----~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~ 261 (361)
..+...+.........++||+.++|+.|+++ ++++|+||+....+...++.+|+..+||.++++++....| |+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~ 156 (224)
T TIGR02254 78 EADEALLNQKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKE 156 (224)
T ss_pred CCcHHHHHHHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHH
Confidence 1233333333333457899999999999999 9999999999999999999999999999999998877655 57
Q ss_pred HHHHHHHHc-CCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEe-CCCCcccccCcceEeCChhhhHHH
Q 018088 262 RFLSAAVKL-DRKPSKCVVFEDDP-RAITAAHNCTMMAVGLI-GAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 262 ~~~~~~~kl-gi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~-g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
+|..+++++ |++|++||+|||+. +|+.+|+++|+.+|++. +.........+++++.++.||..+
T Consensus 157 ~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 223 (224)
T TIGR02254 157 IFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEI 223 (224)
T ss_pred HHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHhh
Confidence 999999999 99999999999998 79999999999999983 333333335689999999998865
No 28
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.91 E-value=1.8e-23 Score=190.59 Aligned_cols=125 Identities=12% Similarity=0.129 Sum_probs=103.5
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
....++||+.++|+.|+++|++++|+||+.+..+...++.+|+..+|+.++++++...+| |++|..+++++|++|++|
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~ 169 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERT 169 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHE
Confidence 456889999999999999999999999999999999999999999999999999877666 579999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeE-EEEeCCCCcccccCcceEeCChhhhHHH
Q 018088 278 VVFEDDPRAITAAHNCTMMA-VGLIGAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~-v~V~g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
++|||+..|+++|+++||.+ ++|..+..... ..+.....+++++..+
T Consensus 170 l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 170 LFIDDSEPILDAAAQFGIRYCLGVTNPDSGIA-EKQYQRHPSLNDYRRL 217 (224)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEEEeCCCCCcc-chhccCCCcHHHHHHH
Confidence 99999999999999999984 67754332222 2333334455544443
No 29
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.91 E-value=8e-23 Score=221.93 Aligned_cols=224 Identities=23% Similarity=0.242 Sum_probs=168.6
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc----CCChHH-HHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW----GKEESE-LDRLNSRLT 191 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~----~~~~~~-~~~l~~~~~ 191 (361)
++++|||||| ||+|++..+.++|.++++++|++.+.. ......|.+...++..+... ..+... .+.+...+.
T Consensus 74 ~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e--~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 151 (1057)
T PLN02919 74 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVE--DFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYL 151 (1057)
T ss_pred CCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHH--HHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999875433 23455676666665554322 112221 122222222
Q ss_pred HHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-cccceeEecCCCCCCC--hHHHHHHHH
Q 018088 192 QLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-KYFQAIVSEEDGMESM--AHRFLSAAV 268 (361)
Q Consensus 192 ~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~~Fd~iv~~e~~~~~K--P~~~~~~~~ 268 (361)
+.|... ....++||+.++|+.|+++|++++|+||.....+...++.+|+. .+|+.+++++++...| |++|+.+++
T Consensus 152 ~~~~~~--~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~ 229 (1057)
T PLN02919 152 EKYAKP--NSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAK 229 (1057)
T ss_pred HHhhhc--ccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHH
Confidence 222211 12357999999999999999999999999999999999999996 7899999999887655 689999999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccc--cCcceEeCChhhhHHHHH-HhhH-hcCCCChhhHHhh
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDL--VQADLAVANFNELSVINL-RRLF-ANKGSTFMERQKQ 344 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l--~~ad~vi~sl~EL~~~ll-~~l~-~~~~~~~~~l~~~ 344 (361)
++|+.|++||+|||+..|+++|+++||.+|+|.......++ .+++++++++.|+....+ .... +....+.||--+.
T Consensus 230 ~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 309 (1057)
T PLN02919 230 ILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPNVTGMDWINT 309 (1057)
T ss_pred HcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCCccchhhhcc
Confidence 99999999999999999999999999999999554444444 368999999999864433 2222 3335677775443
Q ss_pred h
Q 018088 345 I 345 (361)
Q Consensus 345 ~ 345 (361)
+
T Consensus 310 ~ 310 (1057)
T PLN02919 310 I 310 (1057)
T ss_pred c
Confidence 3
No 30
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.91 E-value=3.7e-23 Score=190.23 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=136.8
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCC----c-hH---HHHHHHhcC------CHH----HHHHHHH-ccC
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIP----Q-EG---DVLRQILNA------GAD----HVLHKVL-LWG 177 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~----~-~~---~~~~~~~g~------~~~----~~l~~~l-~~~ 177 (361)
++++|+||+| ||+|+...+..+++++++..+...+ . .. .+...+... ... ..+..++ ..+
T Consensus 9 ~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 88 (238)
T PRK10748 9 RISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLDAG 88 (238)
T ss_pred CceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHHcC
Confidence 4799999999 9999999999999988766532111 0 00 011100000 000 1111111 112
Q ss_pred CChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC
Q 018088 178 KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME 257 (361)
Q Consensus 178 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~ 257 (361)
.+..............+.. ......++||+.++|+.|++. ++++++||+... ++..|+.++|+.++++++...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~ 161 (238)
T PRK10748 89 LSAEEASAGADAAMINFAK-WRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGR 161 (238)
T ss_pred CCHHHHHHHHHHHHHHHHH-HhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCc
Confidence 2222221112222222222 113357899999999999976 999999998754 478899999999999988766
Q ss_pred CC--hHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEEeCCCCc-----ccccCcceEeCChhhhHHH
Q 018088 258 SM--AHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGLIGAHRA-----YDLVQADLAVANFNELSVI 325 (361)
Q Consensus 258 ~K--P~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V~g~~~~-----~~l~~ad~vi~sl~EL~~~ 325 (361)
.| |++|..+++++|++|++|+||||+ ..|+.+|+++|+.+|||...... .....++++|.++.||..+
T Consensus 162 ~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~~ 237 (238)
T PRK10748 162 SKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTSL 237 (238)
T ss_pred CCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHhh
Confidence 55 579999999999999999999999 58999999999999999543221 1123589999999999875
No 31
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.90 E-value=9.7e-23 Score=182.53 Aligned_cols=177 Identities=15% Similarity=0.174 Sum_probs=130.5
Q ss_pred eEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHH---HHHH-------------hcCCHHH----HHHHHHcc-C
Q 018088 120 YGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDV---LRQI-------------LNAGADH----VLHKVLLW-G 177 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~---~~~~-------------~g~~~~~----~l~~~l~~-~ 177 (361)
++|+||+| ||+|+...+..++.++++++|++.+..+.. ...+ .|....+ .+...+.. +
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 57999999 999999999999999999999876543211 0111 0223222 22222221 1
Q ss_pred -CChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC
Q 018088 178 -KEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM 256 (361)
Q Consensus 178 -~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~ 256 (361)
............+...+.. .....++||+.++|+.|+++|++++|+||+... +...++.+|+..+|+.++++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 81 VPDPESFEKIFEELYSYFAT--PEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG 157 (203)
T ss_pred CCCchhHHHHHHHHHHHhcC--CCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC
Confidence 1222233333333222211 123468999999999999999999999998765 578899999999999999999887
Q ss_pred CCC--hHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEE
Q 018088 257 ESM--AHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVG 299 (361)
Q Consensus 257 ~~K--P~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~ 299 (361)
..| |++|.++++++|++|++|++|||+. +|+.+|+++|+.+|+
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 666 4689999999999999999999997 799999999999875
No 32
>PLN02811 hydrolase
Probab=99.90 E-value=1.4e-22 Score=184.18 Aligned_cols=194 Identities=18% Similarity=0.239 Sum_probs=146.7
Q ss_pred ce-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHcc-CC----ChHHHHHHHHHHHHHHHHhcc
Q 018088 126 WD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLW-GK----EESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 126 lD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~-~~----~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|| ||+|++..+..+|.++++++|++.+. .....+.|......+..+... +. ..+.+.. .....+... .
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~--~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~ 74 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDW--SLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLV---EREAMLQDL-F 74 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCH--HHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHH---HHHHHHHHH-H
Confidence 79 99999999999999999999987432 244556777766665554432 22 1222222 222222222 2
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH-HHhCCCCcccceeEecC--CCCCCC--hHHHHHHHHHcC---
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA-LERMGLLKYFQAIVSEE--DGMESM--AHRFLSAAVKLD--- 271 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~-L~~lgl~~~Fd~iv~~e--~~~~~K--P~~~~~~~~klg--- 271 (361)
....++||+.++|+.|+++|++++|+||+.+..+... ++..++..+|+.+++++ ++...| |++|..++++++
T Consensus 75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~ 154 (220)
T PLN02811 75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154 (220)
T ss_pred hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence 3457899999999999999999999999987655543 33457889999999999 665555 679999999997
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcccccCcceEeCChhhhHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAYDLVQADLAVANFNELSVI 325 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~~l~~ad~vi~sl~EL~~~ 325 (361)
+.|++|+||||+..|+++|+++|+.+|+| ++........++|+++.++.|+...
T Consensus 155 ~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~~ 209 (220)
T PLN02811 155 VDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKPE 209 (220)
T ss_pred CCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCHH
Confidence 99999999999999999999999999999 4443434455789999999987643
No 33
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.89 E-value=1.7e-22 Score=180.41 Aligned_cols=103 Identities=15% Similarity=0.148 Sum_probs=96.3
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
...++||+.++|+.|+++|++++++||+....+...++.+|+..+||.++++++++..| |++|..+++++|+.|++|+
T Consensus 90 ~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 90 RLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred cCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 34789999999999999999999999999999999999999999999999999987766 5799999999999999999
Q ss_pred EEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 279 VFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
+|||+.+|+.+|+++||.+|+|...
T Consensus 170 ~vgD~~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred EEeCCHHHHHHHHHCCCcEEEecCC
Confidence 9999999999999999999999543
No 34
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.89 E-value=1.9e-22 Score=174.34 Aligned_cols=172 Identities=26% Similarity=0.400 Sum_probs=134.4
Q ss_pred EEEece-eccccHHHHHHHHHH-HHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 122 LIFSWD-VVADTRALKLNAWKQ-LAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~-~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|+||+| ||+++...+.++|.. +++.+|.+. .....+...+......+..++..... ........+.+. ...
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~ 73 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEI--SAEELRELFGKSYEEALERLLERFGI--DPEEIQELFREY---NLE 73 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHH--HHHHHHHHTTSHHHHHHHHHHHHHHH--HHHHHHHHHHHH---HHH
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCC--CHHHHHHHhCCCHHHHHHHhhhccch--hHHHHHHHhhhh---hhh
Confidence 799999 999999988888887 477777652 22233444455555555554432211 111122222221 112
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~ 277 (361)
...+++||+.++|+.|+++|++++++||++...+...++++|+.++|+.++++++.+..|| +.|..+++++|++|++|
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 4458899999999999999999999999999999999999999999999999998877775 79999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEE
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
++|||+..|+.+|+++|+.+|+|
T Consensus 154 ~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEESSHHHHHHHHHTTSEEEEE
T ss_pred EEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999986
No 35
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=99.88 E-value=3.7e-21 Score=173.09 Aligned_cols=202 Identities=21% Similarity=0.315 Sum_probs=163.2
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.+.+++|||| ||+|++..+.++|.+++.++|.+.+.+ ...++.|....+....+..+..+.-..++...+..+....
T Consensus 9 ~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~--~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~~~~~ 86 (222)
T KOG2914|consen 9 KVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWD--VKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEEILDR 86 (222)
T ss_pred ceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHH--HHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 3679999999 999999999999999999999855544 5567889998888888775554555555555555554444
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCC-CCcccceeEe--cCCCCCCC--hHHHHHHHHHcC
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMG-LLKYFQAIVS--EEDGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lg-l~~~Fd~iv~--~e~~~~~K--P~~~~~~~~klg 271 (361)
.+ ....++||+..+++.|+.+|++++++|+..+......+++++ +...|+.++. +.++..+| |++|+.+++.+|
T Consensus 87 ~~-~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~ 165 (222)
T KOG2914|consen 87 LF-MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLG 165 (222)
T ss_pred hc-cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcC
Confidence 43 456889999999999999999999999999999999999996 8888988887 55566666 679999999999
Q ss_pred CCC-CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-cccCcceEeCChhhh
Q 018088 272 RKP-SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-DLVQADLAVANFNEL 322 (361)
Q Consensus 272 i~p-~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-~l~~ad~vi~sl~EL 322 (361)
..| ++|++|+|++.++.+|++|||.+|+|....-.. ...+++.++.++.+.
T Consensus 166 ~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~ 218 (222)
T KOG2914|consen 166 VPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDF 218 (222)
T ss_pred CCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceeccccccc
Confidence 998 999999999999999999999999996522221 123577777776654
No 36
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.88 E-value=4e-21 Score=171.51 Aligned_cols=172 Identities=19% Similarity=0.164 Sum_probs=127.9
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCH--------HHHHHHHHccCC-----ChHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGA--------DHVLHKVLLWGK-----EESELDRL 186 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~--------~~~l~~~l~~~~-----~~~~~~~l 186 (361)
+|||||| ||+|++..+..+|.++++++|......+ ....+.|.+. ...+...+.... .....+.+
T Consensus 2 ~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T TIGR01548 2 ALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHA-DIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV 80 (197)
T ss_pred ceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHH-HHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence 6999999 9999999999999999999984332222 2334444321 122222232111 22233444
Q ss_pred HHHHHHHHHHhccc---------CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC
Q 018088 187 NSRLTQLYYDNLLS---------VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME 257 (361)
Q Consensus 187 ~~~~~~~~~~~l~~---------~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~ 257 (361)
...+.+.|...... ...+.+++.++|+.|++.|++++|+||+....+...++.+|+..+|+.+++++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~ 160 (197)
T TIGR01548 81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP 160 (197)
T ss_pred HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC
Confidence 44455544432111 124566779999999999999999999999999999999999999999999988654
Q ss_pred -CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 258 -SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 258 -~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
++|+.|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 446899999999999999999999999999999975
No 37
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.87 E-value=2e-21 Score=175.17 Aligned_cols=180 Identities=13% Similarity=0.099 Sum_probs=124.6
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHH-H------
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSR-L------ 190 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~-~------ 190 (361)
+++|||||| ||+|+.. ...+|...+...|++ .......+.+.........+.....+..++.....+ +
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 77 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK---DFIVTVNITGPDFNPWARTFERGELTAEAFDGLFRHEYGLRLGH 77 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc---cHHHHHHhcCCCCChHHHHHHcCCCCHHHHHHHHHHHhccccCC
Confidence 579999999 9999976 667777665555543 222233444544333333221111222222211111 1
Q ss_pred ----HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHH--HHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 191 ----TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK--MVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 191 ----~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~--~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
...+.........++||+.++|+.|+++|++++|+||+.... ....+...++..+||.++++++....| |++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~ 157 (211)
T TIGR02247 78 DVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRI 157 (211)
T ss_pred CcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHH
Confidence 011111112245789999999999999999999999986543 333445568889999999998876666 579
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
|..+++++|+.|++|+||||+..|+.+|+++|+.+|++.+
T Consensus 158 ~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 158 YQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 9999999999999999999999999999999999999843
No 38
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.87 E-value=1.9e-21 Score=171.66 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=123.2
Q ss_pred EEEEece-eccccHHHHHHHHHHHHH-----HhCCCCCchHHHHH---HHhcCCHHHHHHHHHccCCChHHHHHHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAF-----EEGKEIPQEGDVLR---QILNAGADHVLHKVLLWGKEESELDRLNSRLT 191 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~-----~~G~~~~~~~~~~~---~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~ 191 (361)
+|||||| ||+|+...+..+|.+.+. ++|++......+.. ...|......... ....... +.
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~---~~~~~~~-------~~ 71 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL---HEIDADE-------YL 71 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh---hCCCHHH-------HH
Confidence 7999999 999999888888887654 45654432221211 1123323332222 1222221 22
Q ss_pred HHHHHhc-ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC------CChHHHH
Q 018088 192 QLYYDNL-LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME------SMAHRFL 264 (361)
Q Consensus 192 ~~~~~~l-~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~------~KP~~~~ 264 (361)
..+.+.. .....++||+.++|+.|+ .+++|+||+....+...++.+|+.++||.++++++... ++|++|.
T Consensus 72 ~~~~~~~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~ 148 (184)
T TIGR01993 72 RYVHGRLPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYE 148 (184)
T ss_pred HHHhccCCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHH
Confidence 2222211 123478999999999998 58999999999999999999999999999999988653 4568999
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.+++++|+.|++|++|||+..|+.+|+++|+.+|+|
T Consensus 149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 149 KALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999999999999875
No 39
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.87 E-value=2.8e-21 Score=172.38 Aligned_cols=187 Identities=11% Similarity=0.157 Sum_probs=133.7
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
+++||||+| ||+|+. .++.++++++|++. + ... ...+.+....+...++ .+.....++...+.. ..
T Consensus 2 ~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~-~~~-~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~ 68 (197)
T PHA02597 2 KPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--D-HIL-KMIQDERFRDPGELFG--CDQELAKKLIEKYNN---SD 68 (197)
T ss_pred CcEEEEecCCceEchh----hccHHHHHhcCCCH--H-HHH-HHHhHhhhcCHHHHhc--ccHHHHHHHhhhhhH---HH
Confidence 589999999 999944 56788888898753 2 222 2233332222333333 233333343333332 22
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc----ccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK----YFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~----~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
......++||+.++|+.|++. ++++++||.........++.+++.. +|+.++++++. .+||++|..+++++|
T Consensus 69 ~~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~-~~kp~~~~~a~~~~~-- 144 (197)
T PHA02597 69 FIRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD-ESKEKLFIKAKEKYG-- 144 (197)
T ss_pred HHHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC-cccHHHHHHHHHHhC--
Confidence 233457899999999999987 5788889987777666777777765 45777777764 568999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHc--CCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 274 PSKCVVFEDDPRAITAAHNC--TMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~a--G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
|++|+||||+..|+.+|++| |+.+|++..... .....+++.|.++.|+.
T Consensus 145 ~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 145 DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER-DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh-ccccchhhhhccHHHHh
Confidence 89999999999999999999 999999943333 33345779999999975
No 40
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.86 E-value=1.4e-20 Score=165.06 Aligned_cols=98 Identities=24% Similarity=0.407 Sum_probs=90.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
..++||+.++|+.|+++|++++++||+.... ...+.++|+..+|+.++++++...+| |+.|..+++++|++|++|++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 162 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLF 162 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEE
Confidence 5889999999999999999999999999888 66666799999999999998877777 57999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEE
Q 018088 280 FEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V 300 (361)
|||+..|+.+|+++|+.+|+|
T Consensus 163 vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 163 VDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EcCCHHHHHHHHHcCCEEEeC
Confidence 999999999999999999875
No 41
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.86 E-value=2.6e-21 Score=175.35 Aligned_cols=189 Identities=13% Similarity=0.100 Sum_probs=130.5
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHc-cCCChHHHHHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLL-WGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~-~~~~~~~~~~l~~~~~~~~ 194 (361)
++++++||+| ||++++ .|.++++.+|.+............|. .....+...+. +..... +.+
T Consensus 13 ~~k~iiFD~DGTL~~~~-----~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~ 77 (219)
T TIGR00338 13 SKKLVVFDMDSTLINAE-----TIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKGLPV----------ELL 77 (219)
T ss_pred cCCEEEEeCcccCCCch-----HHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCH----------HHH
Confidence 4689999999 999986 67788888886533222222222221 22222222111 111111 011
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeE-------ecC----CC-CCCChHH
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIV-------SEE----DG-MESMAHR 262 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv-------~~e----~~-~~~KP~~ 262 (361)
.......+++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+..+ ++. .. ..+||+.
T Consensus 78 -~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (219)
T TIGR00338 78 -KEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYKGKT 156 (219)
T ss_pred -HHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence 1111234789999999999999999999999999999999999999998885432 221 11 2348999
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHH
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVI 325 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ 325 (361)
|..++++++++|++|++|||+.+|+.+|+++|+.+++ .+ .......|++++. ++.++..+
T Consensus 157 ~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~--~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 157 LLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NA--KPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CC--CHHHHHhchhccCCCCHHHHHhh
Confidence 9999999999999999999999999999999998543 22 2222346889987 55666654
No 42
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.86 E-value=2.5e-20 Score=169.47 Aligned_cols=126 Identities=21% Similarity=0.217 Sum_probs=111.9
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcEE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~v 278 (361)
..+++|++.+.|+.++.. ++++++||+....+...++++|+.++||.++++++.+..|| ++|..+++++|++|++|+
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l 175 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEAL 175 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEE
Confidence 358899999999999999 99999999999999999999999999999999999998886 599999999999999999
Q ss_pred EEcCChH-HHHHHHHcCCeEEEEeCCCC--cccccCcceEeCChhhhHHHHH
Q 018088 279 VFEDDPR-AITAAHNCTMMAVGLIGAHR--AYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 279 ~IGDs~~-Di~aA~~aG~~~v~V~g~~~--~~~l~~ad~vi~sl~EL~~~ll 327 (361)
+|||+.. |+.+|+++||.+||+...+. ......+++.+.++.++..++.
T Consensus 176 ~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 176 FVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHh
Confidence 9999986 77999999999999844332 1222568999999999988754
No 43
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.85 E-value=6e-21 Score=182.26 Aligned_cols=182 Identities=11% Similarity=0.042 Sum_probs=132.4
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHH-ccCCChHHHHHHHHHHHHH
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVL-LWGKEESELDRLNSRLTQL 193 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l-~~~~~~~~~~~l~~~~~~~ 193 (361)
..+++|+|||| ||+..+ +|.++++.+|..........+.+.|. ...+.+...+ ........+
T Consensus 108 ~~~~LvvfDmDGTLI~~e-----~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g~~~~i---------- 172 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQIE-----CIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKGADANI---------- 172 (322)
T ss_pred cCCCEEEEECCCCCcchH-----HHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCCCCHHH----------
Confidence 45799999999 999665 89999999987665544444555543 2333332221 111111111
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc-------eeEecC----C-CCCCChH
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ-------AIVSEE----D-GMESMAH 261 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd-------~iv~~e----~-~~~~KP~ 261 (361)
.+.+....+++||++++|+.|++.|++++|+|+++....+..++.+|+...+. ..+++. . ...+||+
T Consensus 173 -l~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~ 251 (322)
T PRK11133 173 -LQQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKAD 251 (322)
T ss_pred -HHHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHH
Confidence 11112335789999999999999999999999999999999999999976553 222222 1 1346899
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA 317 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~ 317 (361)
.+..+++++|+++++|++|||+.||+.|++.||+++++ +..+.....||++++
T Consensus 252 ~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~---nAkp~Vk~~Ad~~i~ 304 (322)
T PRK11133 252 TLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY---HAKPKVNEQAQVTIR 304 (322)
T ss_pred HHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe---CCCHHHHhhCCEEec
Confidence 99999999999999999999999999999999998776 334444568999997
No 44
>PLN02954 phosphoserine phosphatase
Probab=99.84 E-value=1.5e-19 Score=164.23 Aligned_cols=191 Identities=17% Similarity=0.110 Sum_probs=132.8
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
+|+|||||| ||++++ .+..+++.+|.+....+.....+.+. ...+.+...+...... . ..+.+.+.+
T Consensus 12 ~k~viFDfDGTL~~~~-----~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~ 80 (224)
T PLN02954 12 ADAVCFDVDSTVCVDE-----GIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKPS--L----SQVEEFLEK 80 (224)
T ss_pred CCEEEEeCCCcccchH-----HHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCCC--H----HHHHHHHHH
Confidence 689999999 999986 67888999987543333332222222 3444444322221111 1 111222222
Q ss_pred hcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--cccceeE--------ecCC------CCCCCh
Q 018088 197 NLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--KYFQAIV--------SEED------GMESMA 260 (361)
Q Consensus 197 ~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--~~Fd~iv--------~~e~------~~~~KP 260 (361)
....++||+.++|+.|+++|++++|+|++....+...++.+|+. .+|+..+ .+.+ ...+||
T Consensus 81 ---~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~ 157 (224)
T PLN02954 81 ---RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKA 157 (224)
T ss_pred ---ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHH
Confidence 12468999999999999999999999999999999999999996 4664321 1111 234589
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC-cc-cccCcceEeCChhhhHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR-AY-DLVQADLAVANFNELSVI 325 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~-~~-~l~~ad~vi~sl~EL~~~ 325 (361)
+.+..+++++|. ++|++|||+.+|+.+|+++|+.++..++.+. .. ....+++++.++.||..+
T Consensus 158 ~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 158 EAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred HHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 999999999885 6899999999999999999988766555432 22 224689999999998765
No 45
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.83 E-value=8.5e-20 Score=163.27 Aligned_cols=101 Identities=13% Similarity=0.045 Sum_probs=91.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
.++||+.++|+.|+++|++++|+||+........+.. .++..+||.++++++++..| |++|..+++++|++|++|++
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 5799999999999999999999999988877766655 47888999999999987766 57999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCC
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
|||+..|+.+|+++|+.++++.+.
T Consensus 164 vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 164 FDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred eCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999998543
No 46
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.82 E-value=3.5e-19 Score=152.42 Aligned_cols=152 Identities=18% Similarity=0.262 Sum_probs=116.9
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
+|+||+| ||+|+...+..+|.++++++|.+. . ......|...... .... ..+.+ +.. ..
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~~~--~--~~~~~~g~~~~~~-~~~~-------------~~~~~-~~~-~~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGEDF--Q--ALKALRGLAEELL-YRIA-------------TSFEE-LLG-YD 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcccH--H--HHHHHHccChHHH-HHHH-------------HHHHH-HhC-cc
Confidence 4899999 999999999999999999998522 1 1122333322222 1111 01111 111 11
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC-CCChHHHHHHHHHcCCCCCcEE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM-ESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~-~~KP~~~~~~~~klgi~p~~~v 278 (361)
.....+||+.++|+.|+++|++++++||+....+...++.+ +..+|+.+++.++.. +++|+.|.++++++|++| +|+
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEE
Confidence 23356899999999999999999999999999999999998 888999999988776 334689999999999999 999
Q ss_pred EEcCChHHHHHHHHcC
Q 018088 279 VFEDDPRAITAAHNCT 294 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG 294 (361)
+|||+..|+.+|+++|
T Consensus 139 ~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 139 HVGDNLNDIEGARNAG 154 (154)
T ss_pred EEeCCHHHHHHHHHcc
Confidence 9999999999999997
No 47
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.81 E-value=4.1e-18 Score=154.44 Aligned_cols=200 Identities=14% Similarity=0.123 Sum_probs=136.0
Q ss_pred ceEEEEece-eccccHHH-------HHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHH---HHHHHccCCChHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRAL-------KLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHV---LHKVLLWGKEESELDRL 186 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~-------~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~---l~~~l~~~~~~~~~~~l 186 (361)
+++|++|+. |..+..-. ..+.+..++..+.-.. .-.. .+...+. ....+ +...+..+.....+..+
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~l 78 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYEST-IVEN-LRELGKTPEELILLRKLHAEMDKDRKATPLKTL 78 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCH-HHHH-HHHhccCCcHHHHHHHHHHHHHcCCCcchHHHH
Confidence 468999999 99886532 2223333343332111 1111 1111111 11232 23334455555666677
Q ss_pred HHH-HHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCCCCChHH
Q 018088 187 NSR-LTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGMESMAHR 262 (361)
Q Consensus 187 ~~~-~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~~~KP~~ 262 (361)
... +.+.|.. ......++||+.++|+.|+++|++++|+||++...+...++.. ++..+|+.++....+.+++|+.
T Consensus 79 qg~iw~~~Y~~-~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~ 157 (220)
T TIGR01691 79 QGLIWRQGYES-GELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQS 157 (220)
T ss_pred HHHHHHHHHhc-CCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHH
Confidence 666 4555544 3445678999999999999999999999999999888888875 6777888877655555666889
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCc--ccc-cCcceEeCChhh
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA--YDL-VQADLAVANFNE 321 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~--~~l-~~ad~vi~sl~E 321 (361)
|..+++++|++|++|++|||+..|+.+|+++||.++++...++. .+. ..-..++.||++
T Consensus 158 y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~~~~~~~~~~~~~~~~~~~~ 219 (220)
T TIGR01691 158 YVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGNDPVVDPSFPVYPQFPDLNA 219 (220)
T ss_pred HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCCCCCCcccCCCCCeecCccc
Confidence 99999999999999999999999999999999999998443322 111 111556777765
No 48
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.78 E-value=2.4e-18 Score=153.27 Aligned_cols=100 Identities=9% Similarity=-0.010 Sum_probs=87.0
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------CCChHHHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------ESMAHRFLSAAV 268 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------~~KP~~~~~~~~ 268 (361)
...++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+..+..++.+ ..|++.+..+++
T Consensus 78 ~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 78 EISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred hCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 34789999999999999999999999999999999999999988887766554332 234568888999
Q ss_pred HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
++|++|++|++|||+.+|+.+|++||+.++..
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~ 189 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISLG 189 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC
Confidence 99999999999999999999999999987663
No 49
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.77 E-value=8.4e-18 Score=150.67 Aligned_cols=186 Identities=12% Similarity=0.118 Sum_probs=124.4
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhc-CCHHHHHHHHH----ccCCChHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILN-AGADHVLHKVL----LWGKEESELDRLNSRLTQ 192 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g-~~~~~~l~~~l----~~~~~~~~~~~l~~~~~~ 192 (361)
+++|+|||| ||++ +.|..+++++|++... ..+.+ ......+...+ ..+.+.+.+
T Consensus 1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i--------- 60 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELR-----ATTRDIPDYDVLMKQRLDILDEHGLGLADI--------- 60 (205)
T ss_pred CeEEEEeCCCCChh------hHHHHHHHHcCChHHH-----HHhcCCCCHHHHHHHHHHHHHHcCCCHHHH---------
Confidence 478999999 9993 2677788888864311 00111 11222222111 111111111
Q ss_pred HHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC----C--CCChHHHHHH
Q 018088 193 LYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG----M--ESMAHRFLSA 266 (361)
Q Consensus 193 ~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~----~--~~KP~~~~~~ 266 (361)
.. ......++||+.++|+.|+++ ++++|+||+....+...++.+|+..+|+..+..++. + .++|+....+
T Consensus 61 --~~-~~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~ 136 (205)
T PRK13582 61 --QE-VIATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQA 136 (205)
T ss_pred --HH-HHHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHH
Confidence 11 123447899999999999999 999999999999999999999999888765443211 1 2356666777
Q ss_pred HHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcce-EeCChhhhHHHHHHhh
Q 018088 267 AVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADL-AVANFNELSVINLRRL 330 (361)
Q Consensus 267 ~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~-vi~sl~EL~~~ll~~l 330 (361)
+++++..+++|+||||+.+|+.+++++|+++. + +.........+++ +++++.||..++.+.+
T Consensus 137 l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~-~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 137 VKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-F-RPPANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred HHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-E-CCCHHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 77787788999999999999999999998653 2 2221111124555 8999999988766544
No 50
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.77 E-value=1.9e-18 Score=151.01 Aligned_cols=157 Identities=15% Similarity=0.135 Sum_probs=111.5
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCC---CCc---hHHHHHHHhcC--CHHH----HHHHHHc---cCCChHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKE---IPQ---EGDVLRQILNA--GADH----VLHKVLL---WGKEESELD 184 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~---~~~---~~~~~~~~~g~--~~~~----~l~~~l~---~~~~~~~~~ 184 (361)
+|+||+| ||+|++..+..++.+++++.+.. ... .........+. .... .+..+.. ......
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--- 77 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK--- 77 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH---
Confidence 5899999 99999999999999888775421 000 00111112121 1112 2222222 111221
Q ss_pred HHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHH
Q 018088 185 RLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHR 262 (361)
Q Consensus 185 ~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~ 262 (361)
....+...+ ....++||+.++|+ +++|+||+....+...++++|+..+|+.+++++++...| |++
T Consensus 78 -~~~~~~~~~-----~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~ 144 (175)
T TIGR01493 78 -YGERLRDAY-----KNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVV 144 (175)
T ss_pred -HHHHHHHHH-----hcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHH
Confidence 111122212 23478999999998 379999999999999999999999999999999877666 579
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
|+.+++++|++|++|+||||+..|+.+|+++
T Consensus 145 f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 145 YELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999999874
No 51
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.76 E-value=9.7e-18 Score=147.82 Aligned_cols=123 Identities=18% Similarity=0.091 Sum_probs=97.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEecC-----CCCCCC--h
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVSEE-----DGMESM--A 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~~e-----~~~~~K--P 260 (361)
.++||+.++|+.|+++|++++|+||... ..+...++.+|+ +|+.++.+. +....| |
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~~KP~p 106 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDCRKPKP 106 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcCCCCCH
Confidence 5799999999999999999999999862 344556777777 477776542 333445 6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCcccc-cCc--ceEeCChhhhHHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRAYDL-VQA--DLAVANFNELSVINL 327 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~~~l-~~a--d~vi~sl~EL~~~ll 327 (361)
++|..+++++|+.|++|+||||+.+|+.+|+++|+.++++. |....... ..+ ++++.++.|+..++.
T Consensus 107 ~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 107 GMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 79999999999999999999999999999999999999884 33322222 246 999999999987654
No 52
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.76 E-value=4.5e-18 Score=153.76 Aligned_cols=186 Identities=18% Similarity=0.114 Sum_probs=132.5
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHH---HHHHHh-------------c-CCHHHHHHHHHccC
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGD---VLRQIL-------------N-AGADHVLHKVLLWG 177 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~---~~~~~~-------------g-~~~~~~l~~~l~~~ 177 (361)
.+.+|+|+||++ ||+.........|.++++.+|++...... ....+. | -..++++..+....
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~ 83 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST 83 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence 345899999999 99988778888999999999988543211 111110 1 12333333222111
Q ss_pred C---ChHHHHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC
Q 018088 178 K---EESELDRLNS-RLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 178 ~---~~~~~~~l~~-~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
. .....+++.. -....|........+..+++.++++.|++.|..++++||.+...- ..+..+|+..+||.++.+.
T Consensus 84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD~vv~S~ 162 (237)
T KOG3085|consen 84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFDFVVESC 162 (237)
T ss_pred hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhhhhhhhh
Confidence 1 1111111111 111222222122446788888999999999999999999876654 8888899999999999999
Q ss_pred CCCCCChH--HHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEEeC
Q 018088 254 DGMESMAH--RFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 254 ~~~~~KP~--~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V~g 302 (361)
+.+..||+ +|+.+++++++.|++|++|||.. ||+++|+++||.++.|..
T Consensus 163 e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~ 214 (237)
T KOG3085|consen 163 EVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDN 214 (237)
T ss_pred hhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcc
Confidence 99888865 99999999999999999999986 589999999999998843
No 53
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.75 E-value=5.2e-17 Score=148.48 Aligned_cols=151 Identities=12% Similarity=0.037 Sum_probs=113.4
Q ss_pred CCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHH
Q 018088 116 PDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~ 194 (361)
.++.-+|+||+| ||+|+...+ .+|.+...... .....+......+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~---------~~G~~~~s~~~-~~~l~g~~~w~~~~----------------------- 106 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGF---------WRGKKTFSPGS-EDYLKNQVFWEKVN----------------------- 106 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHH---------hCCcccCCHHH-hhhhcChHHHHHHH-----------------------
Confidence 444459999999 999999765 26766432211 22233332222222
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCC----CHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHc
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGL----DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKL 270 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~----~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl 270 (361)
........+.+++.++|+.|+++|++++++||. ....+..+++.+|+..+|+.+++++....+||+.. .+++++
T Consensus 107 -~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~-~~l~~~ 184 (237)
T TIGR01672 107 -NGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT-QWIQDK 184 (237)
T ss_pred -HhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH-HHHHhC
Confidence 122233467888999999999999999999998 67789999999999999999999988877888765 466777
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR 305 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~ 305 (361)
++ ++||||+.+|+.+|++||+.+++| ++.+.
T Consensus 185 ~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 185 NI----RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred CC----eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 76 799999999999999999999988 55543
No 54
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.73 E-value=4.1e-17 Score=148.13 Aligned_cols=193 Identities=16% Similarity=0.098 Sum_probs=126.1
Q ss_pred eEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 120 YGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
++|+||+| ||++++..+ .++++++. ....+.....+.|. +....+...+..-... .. ....+.+
T Consensus 4 ~~vifDfDgTi~~~d~~~-----~~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~-~~----~~~~~~~--- 69 (219)
T PRK09552 4 IQIFCDFDGTITNNDNII-----AIMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN-LK----EEIIQFL--- 69 (219)
T ss_pred cEEEEcCCCCCCcchhhH-----HHHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC-ch----HHHHHHH---
Confidence 48999999 999998543 24444542 11122222222233 3444444444332111 11 1111222
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc--cc--ceeEecCCCCCCChH--H---------
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK--YF--QAIVSEEDGMESMAH--R--------- 262 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~--~F--d~iv~~e~~~~~KP~--~--------- 262 (361)
.....++||+.++|+.|+++|++++|+|++....+...++.+ +.. ++ +..++++.....||+ .
T Consensus 70 -~~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 70 -LETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGC 147 (219)
T ss_pred -HhCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence 234588999999999999999999999999999999999998 643 33 334455444444543 2
Q ss_pred -HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCc--ccccCcceEeCChhhhHHHHHHhh
Q 018088 263 -FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA--YDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 263 -~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~--~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
...++++++..+++|+||||+.+|+.+|++||+..+ .+.... .....+.+.+.++.|+...+.+.+
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f~ei~~~l~~~~ 216 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETFHDVQTELKHLL 216 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCHHHHHHHHHHHh
Confidence 357889999999999999999999999999999433 221111 133458888999999998865544
No 55
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.72 E-value=7.9e-18 Score=146.81 Aligned_cols=102 Identities=11% Similarity=0.037 Sum_probs=90.4
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCC-CHHHHHHHHHhCCCC---------cccceeEecCCCCCCChH--HHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGL-DRRKMVEALERMGLL---------KYFQAIVSEEDGMESMAH--RFLSAAV 268 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~-~~~~~~~~L~~lgl~---------~~Fd~iv~~e~~~~~KP~--~~~~~~~ 268 (361)
...++||+.++|+.|+++|++++|+||+ ....+...++.+|+. ++|+.++++++....||. ++..+.+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 4478999999999999999999999998 889999999999998 999999999886556653 5666666
Q ss_pred Hc--CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 269 KL--DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 269 kl--gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
.+ |++|++|+||||++.|+.+|+++|+.++++..
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 66 79999999999999999999999999999843
No 56
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.70 E-value=1.8e-16 Score=139.08 Aligned_cols=119 Identities=14% Similarity=0.109 Sum_probs=95.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEecC-----------CC-
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVSEE-----------DG- 255 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~~e-----------~~- 255 (361)
.++||+.++|+.|+++|++++|+||.+. ..+...++.+++. |+.++.+. +.
T Consensus 26 ~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 103 (176)
T TIGR00213 26 EFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEFRQVCD 103 (176)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccccCCCC
Confidence 6799999999999999999999999874 4455667777775 66665431 22
Q ss_pred -CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE-EEE-eCCCCcccc-cCcceEeCChhhhH
Q 018088 256 -MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA-VGL-IGAHRAYDL-VQADLAVANFNELS 323 (361)
Q Consensus 256 -~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~-v~V-~g~~~~~~l-~~ad~vi~sl~EL~ 323 (361)
.+++|++|..+++++|++|++|+||||+..|+++|+++|+.+ ++| +|....... ..||++++++.||.
T Consensus 104 ~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 104 CRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 244578999999999999999999999999999999999997 687 444332233 35999999999985
No 57
>PRK06769 hypothetical protein; Validated
Probab=99.70 E-value=1.1e-16 Score=140.07 Aligned_cols=124 Identities=15% Similarity=0.125 Sum_probs=97.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHH--------HHHHHHHhCCCCcccceeE-ecCCCCCC--ChHHHHHHHHHcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRR--------KMVEALERMGLLKYFQAIV-SEEDGMES--MAHRFLSAAVKLD 271 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~--------~~~~~L~~lgl~~~Fd~iv-~~e~~~~~--KP~~~~~~~~klg 271 (361)
.++||+.++|+.|+++|++++|+||.... .....++.+|+..+|.... +++++... +|++|+.++++++
T Consensus 28 ~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~ 107 (173)
T PRK06769 28 TLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHG 107 (173)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcC
Confidence 57999999999999999999999998631 2344467778766554333 34444444 4689999999999
Q ss_pred CCCCcEEEEcCChHHHHHHHHcCCeEEEEe-CCCCc------ccc--cCcceEeCChhhhHHHH
Q 018088 272 RKPSKCVVFEDDPRAITAAHNCTMMAVGLI-GAHRA------YDL--VQADLAVANFNELSVIN 326 (361)
Q Consensus 272 i~p~~~v~IGDs~~Di~aA~~aG~~~v~V~-g~~~~------~~l--~~ad~vi~sl~EL~~~l 326 (361)
++|++|+||||+.+|+.+|+++|+.+|+|. +.... ..+ ..+++++.++.|+..++
T Consensus 108 ~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~l 171 (173)
T PRK06769 108 LDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNWI 171 (173)
T ss_pred CCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHHH
Confidence 999999999999999999999999999993 43221 222 35899999999998764
No 58
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.6e-16 Score=143.36 Aligned_cols=165 Identities=17% Similarity=0.141 Sum_probs=124.3
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCC-HHHHHHHH--HccCCChHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAG-ADHVLHKV--LLWGKEESELDRLNSRLTQLY 194 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~-~~~~l~~~--l~~~~~~~~~~~l~~~~~~~~ 194 (361)
.++++|||| ||++. ++|..+++..|..........+.+.+.- ....+... ...+.+...+.+....+
T Consensus 5 ~~L~vFD~D~TLi~~-----~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~~~~---- 75 (212)
T COG0560 5 KKLAVFDLDGTLINA-----ELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVREEF---- 75 (212)
T ss_pred cceEEEecccchhhH-----HHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHHHhc----
Confidence 579999999 99994 4888888888876655555555555543 22222211 11222333333222211
Q ss_pred HHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC---C---------CCChHH
Q 018088 195 YDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG---M---------ESMAHR 262 (361)
Q Consensus 195 ~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~---~---------~~KP~~ 262 (361)
..++||+.++++.+++.|++++|+|+++...+..+.+.+|++..+...+..+++ + ..|-+.
T Consensus 76 -------~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~ 148 (212)
T COG0560 76 -------LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKA 148 (212)
T ss_pred -------CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHH
Confidence 588999999999999999999999999999999999999999888766555541 1 236678
Q ss_pred HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 263 FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
+..+++++|+++++++++|||.||+.|.+.+|.+.+.
T Consensus 149 l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~ 185 (212)
T COG0560 149 LRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV 185 (212)
T ss_pred HHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe
Confidence 9999999999999999999999999999999998665
No 59
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=99.68 E-value=1.2e-15 Score=134.38 Aligned_cols=92 Identities=14% Similarity=0.095 Sum_probs=81.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC----------------------CCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED----------------------GMESM 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~----------------------~~~~K 259 (361)
.++.||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++++. .+..|
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCH
Confidence 47899999999999999999999999999999999999999999999997543 22348
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCe
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
++++..+.++. +++|++|||+.+|+.+|++|++.
T Consensus 151 ~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 151 GKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred HHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 88888887765 89999999999999999999754
No 60
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.65 E-value=7.7e-16 Score=126.99 Aligned_cols=101 Identities=23% Similarity=0.376 Sum_probs=91.9
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChH
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAH 261 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~ 261 (361)
....++|++.++|+.|+++|++++++|++....+...++.+|+..+|+.+++.+... ++|++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 345889999999999999999999999999999999999999988899888876544 55788
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.+..+.++++..++++++|||+.+|+.+++++|+.+++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 999999999999999999999999999999999998874
No 61
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.64 E-value=3.8e-15 Score=133.68 Aligned_cols=179 Identities=12% Similarity=0.119 Sum_probs=115.0
Q ss_pred eEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHH---Hc-cCCChHHHHHHHHHHHHH
Q 018088 120 YGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKV---LL-WGKEESELDRLNSRLTQL 193 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~---l~-~~~~~~~~~~l~~~~~~~ 193 (361)
++++|||| ||++. .|.+++.+.|..... ....+. .....+... +. .+.+...+
T Consensus 2 ~la~FDlD~TLi~~------~w~~~~~~~g~~~~~-----~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i---------- 60 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIAFAEKTGIDALK-----ATTRDIPDYDVLMKQRLRILDEHGLKLGDI---------- 60 (203)
T ss_pred eEEEEeCCcccHHH------HHHHHHHHcCCcHHH-----HHhcCCcCHHHHHHHHHHHHHHCCCCHHHH----------
Confidence 57999999 99964 488899998853211 111111 122222211 11 12233222
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce--------eEecCCCC--CCChHHH
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA--------IVSEEDGM--ESMAHRF 263 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~--------iv~~e~~~--~~KP~~~ 263 (361)
.+.+ ....++||+.++|+.|++.+ +++|+|+++...+..+++.+|+..+|.. .+++.... ..|...+
T Consensus 61 -~~~~-~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~~~~~~~~K~~~l 137 (203)
T TIGR02137 61 -QEVI-ATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV 137 (203)
T ss_pred -HHHH-HhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECeeecCcchHHHHH
Confidence 1111 23478999999999999984 9999999999999999999999988863 22222111 1233344
Q ss_pred HHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccC-cc-eEeCChhhhHHHHHHh
Q 018088 264 LSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQ-AD-LAVANFNELSVINLRR 329 (361)
Q Consensus 264 ~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~-ad-~vi~sl~EL~~~ll~~ 329 (361)
..+ ++.+. +|++|||+.||+.|++.||+++++-. .+....+ +| .++.+++||...+.+.
T Consensus 138 ~~l-~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~a---k~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 138 IAF-KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHA---PENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHH-HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecC---CHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 433 55553 89999999999999999999977722 1222222 22 5677999988876554
No 62
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=99.63 E-value=9.5e-15 Score=128.19 Aligned_cols=202 Identities=15% Similarity=0.130 Sum_probs=136.6
Q ss_pred CceEEEEece-eccccHHHHHHHHH----HHH-HHhCCCCCchHHHHHHHhc-CCHHHHHHHHHccCCChHHHHHHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWK----QLA-FEEGKEIPQEGDVLRQILN-AGADHVLHKVLLWGKEESELDRLNSRL 190 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~----~~l-~~~G~~~~~~~~~~~~~~g-~~~~~~l~~~l~~~~~~~~~~~l~~~~ 190 (361)
.+++++||+| ||+.....+..+.. +++ +++|++......+.....- .+....-....+...+..+..+.....
T Consensus 14 ~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~~ 93 (244)
T KOG3109|consen 14 NYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHGR 93 (244)
T ss_pred cceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhcc
Confidence 4799999999 99987655444433 443 5578776544333222111 111111112223333444433322211
Q ss_pred HHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC---CC---C--hHH
Q 018088 191 TQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM---ES---M--AHR 262 (361)
Q Consensus 191 ~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~---~~---K--P~~ 262 (361)
.- .+..+|-+-++.+|-.|++.+ .++.||+.+..+.+.|+.+|+.+.|+.+++.+... .. | +..
T Consensus 94 LP------lq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~a 165 (244)
T KOG3109|consen 94 LP------LQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEA 165 (244)
T ss_pred Cc------HhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCCCCceeecCCHHH
Confidence 11 122478889999999999875 89999999999999999999999999999987543 11 4 469
Q ss_pred HHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 263 FLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 263 ~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
|..+.+..|+. |.+|++|+||.++|..|++.|+++++|.-.+.. .++|+++.+.-+....+...|
T Consensus 166 fE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~---~~~d~~l~~ih~~k~a~p~l~ 231 (244)
T KOG3109|consen 166 FEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKI---KGVDYALEQIHNNKEALPELW 231 (244)
T ss_pred HHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecc---cchHHHHHHhhchhhhchHHh
Confidence 99999999998 999999999999999999999999987432222 345666665555554444433
No 63
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=99.62 E-value=5.9e-15 Score=133.57 Aligned_cols=192 Identities=14% Similarity=0.038 Sum_probs=121.3
Q ss_pred EEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHHhcc
Q 018088 122 LIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYDNLL 199 (361)
Q Consensus 122 VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~ 199 (361)
|+||+| ||.+.+ .+..+++.++.+ ...+.....+.+. +..+.+...+..-.... .+ . +.+.+.
T Consensus 2 ~~fDFDgTit~~d-----~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~-~~----~----~~~~~~ 66 (214)
T TIGR03333 2 IICDFDGTITNND-----NIISIMKQFAPP-EWEALKDGVLSKTLSIQEGVGRMFGLLPSSL-KE----E----ITSFVL 66 (214)
T ss_pred EEeccCCCCCcch-----hHHHHHHHhCcH-HHHHHHHHHHcCCccHHHHHHHHHhhCCCch-HH----H----HHHHHH
Confidence 799999 999877 333444444321 1122222333333 25555555443322221 11 1 111111
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc---ceeEecCCCCCCCh--HHH----------H
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF---QAIVSEEDGMESMA--HRF----------L 264 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F---d~iv~~e~~~~~KP--~~~----------~ 264 (361)
....++||+.++|+.|+++|++++|+|++....+..+++.++...++ +.++.++.....|| +.+ .
T Consensus 67 ~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~ 146 (214)
T TIGR03333 67 ETAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKP 146 (214)
T ss_pred hcCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHH
Confidence 23578999999999999999999999999999999999987544443 23444433333344 332 4
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC--cccccCcceEeCChhhhHHHHHHhh
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR--AYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~--~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
.++++++..+++|+||||+.+|+.+|++||+. .+.+... ......+...+.++.|+...+.+++
T Consensus 147 ~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~--~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~ 212 (214)
T TIGR03333 147 SLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLC--FARDYLLNECEELGLNHAPFQDFYDVRKELENVK 212 (214)
T ss_pred HHHHHHhhcCCcEEEEeCCHHHHHHHHhCCee--EehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHh
Confidence 67777778899999999999999999999983 2222111 1222347777899999988876544
No 64
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.60 E-value=1.6e-15 Score=130.64 Aligned_cols=187 Identities=16% Similarity=0.097 Sum_probs=131.5
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC-CHHHHHHHHHccCCChHHHHHHHHHHHHHHHH
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA-GADHVLHKVLLWGKEESELDRLNSRLTQLYYD 196 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~ 196 (361)
.++|+||+| |++..+ .++++++..|+.....+...+.|-|. +.++.+...+.. .+-......+
T Consensus 16 ~~aVcFDvDSTvi~eE-----gIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~l----------lqp~~~qv~~ 80 (227)
T KOG1615|consen 16 ADAVCFDVDSTVIQEE-----GIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSL----------LQPLQVQVEQ 80 (227)
T ss_pred cCeEEEecCcchhHHh-----hHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHH----------hcccHHHHHH
Confidence 589999999 999888 88999999998877777777777665 455555544322 1222222222
Q ss_pred hcc-cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc--ccc--------eeEecCCC------CCCC
Q 018088 197 NLL-SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK--YFQ--------AIVSEEDG------MESM 259 (361)
Q Consensus 197 ~l~-~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~--~Fd--------~iv~~e~~------~~~K 259 (361)
.+. ....+.||++++.+.|+++|.+++++|++++..+..+-+.+|+.. .|. .-+.+.+. ..+|
T Consensus 81 ~v~~~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggK 160 (227)
T KOG1615|consen 81 FVIKQKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGK 160 (227)
T ss_pred HHhcCCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCcc
Confidence 222 355789999999999999999999999999999999999999975 332 22222111 1348
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcc-cccCcceEeCChhhhH
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAY-DLVQADLAVANFNELS 323 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~-~l~~ad~vi~sl~EL~ 323 (361)
++.+..+.+ |.+-+.++||||+.+|++|..- |.-.++..+..-.+ ....+.|.+.+|..|.
T Consensus 161 a~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk~nak~~~~~f~~L~ 222 (227)
T KOG1615|consen 161 AEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVKANAKWYVTDFYVLG 222 (227)
T ss_pred HHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhHhccHHHHHHHHHHc
Confidence 888888888 7788999999999999998776 33334433332222 2245778777777653
No 65
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=99.56 E-value=2.3e-14 Score=125.10 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=79.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC--------------CCCCChHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED--------------GMESMAHRFLSA 266 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~--------------~~~~KP~~~~~~ 266 (361)
...+.||+.++++.++++|++++|+|++....+...++.+|+..+|...+..++ ....|+..+..+
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~ 150 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKEL 150 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHHHH
Confidence 346799999999999999999999999999999999999999887765444321 123367888888
Q ss_pred HHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 267 AVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 267 ~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
++++++++++|++|||+.+|+.|++.|
T Consensus 151 ~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 151 LEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 999999999999999999999999865
No 66
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.56 E-value=4.9e-14 Score=128.83 Aligned_cols=99 Identities=12% Similarity=0.090 Sum_probs=81.4
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCC----CHHHHHHHHHhCCC--CcccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGL----DRRKMVEALERMGL--LKYFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~----~~~~~~~~L~~lgl--~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
....|.||++++|+.|+++|++++++||. ....+..+++.+|+ .++|+.+++++.. .||+... +++++++
T Consensus 111 ~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~-~l~~~~i- 186 (237)
T PRK11009 111 EFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQ-WLKKKNI- 186 (237)
T ss_pred ccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHH-HHHhcCC-
Confidence 34578999999999999999999999994 46678888888999 8999999988764 4544332 4556666
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCC
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHR 305 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~ 305 (361)
+++|||+.+|+.+|++||+.+|+| +|.++
T Consensus 187 ---~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 187 ---RIFYGDSDNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred ---eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence 999999999999999999999988 55543
No 67
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.55 E-value=2.2e-14 Score=122.20 Aligned_cols=98 Identities=21% Similarity=0.257 Sum_probs=81.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEe----cCCC--CCCChH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVS----EEDG--MESMAH 261 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~----~e~~--~~~KP~ 261 (361)
+++||+.++|+.|+++|++++|+||... ..+...++.+|+... ..+++ ++.. .+++|+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~~~~~~KP~~~ 105 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPADNCSCRKPKPG 105 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCCCCCCCCCCHH
Confidence 5799999999999999999999999873 466778888998521 12222 3333 355678
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
+|+.+++++|++|++|+||||+..|+++|+++|+.+|+|.
T Consensus 106 ~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~ 145 (147)
T TIGR01656 106 LILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLV 145 (147)
T ss_pred HHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEec
Confidence 9999999999999999999999999999999999999984
No 68
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.55 E-value=3.8e-14 Score=118.21 Aligned_cols=97 Identities=15% Similarity=0.210 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC--------HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHc-CCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD--------RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKL-DRK 273 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~--------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl-gi~ 273 (361)
.++||+.++|+.|+++|++++++||+. ...+...++++|+.. +.++......+++|+.|..+++++ +++
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~KP~~~~~~~~~~~~~~~~ 102 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPI--DVLYACPHCRKPKPGMFLEALKRFNEID 102 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCE--EEEEECCCCCCCChHHHHHHHHHcCCCC
Confidence 579999999999999999999999998 788999999999863 333333334455678999999999 599
Q ss_pred CCcEEEEcC-ChHHHHHHHHcCCeEEEEe
Q 018088 274 PSKCVVFED-DPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 274 p~~~v~IGD-s~~Di~aA~~aG~~~v~V~ 301 (361)
|++|+|||| +..|+.+|+++|+.+|++.
T Consensus 103 ~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 103 PEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred hhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 999999999 7999999999999999974
No 69
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.55 E-value=1.5e-14 Score=125.15 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=85.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC---------------CHHHHHHHHHhCCCCcccceeE-e----cCCCCCCC--h
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL---------------DRRKMVEALERMGLLKYFQAIV-S----EEDGMESM--A 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~---------------~~~~~~~~L~~lgl~~~Fd~iv-~----~e~~~~~K--P 260 (361)
.++||+.++|+.|+++|++++|+||. ....+...++.+|+. |+.++ + +++....| |
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~~KP~~ 106 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDCRKPKI 106 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCCCCCCH
Confidence 78999999999999999999999996 355778889999996 77554 4 35554444 6
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
+++..++++++++|++|+||||+.+|+++|+++|+.++++...
T Consensus 107 ~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 107 KLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 8999999999999999999999999999999999999998543
No 70
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.54 E-value=1.8e-14 Score=119.92 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC-CHHHHHHHHHhCC-------CCcccceeEecCCCCCCChHHHHHHHHHcC--C
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL-DRRKMVEALERMG-------LLKYFQAIVSEEDGMESMAHRFLSAAVKLD--R 272 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~-~~~~~~~~L~~lg-------l~~~Fd~iv~~e~~~~~KP~~~~~~~~klg--i 272 (361)
+++||+.++|+.|+++|++++++||+ ....+...++..+ +..+|+.++++++ .+||++|..+++++| +
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~--~pkp~~~~~a~~~lg~~~ 106 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW--LPKSPRLVEIALKLNGVL 106 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--CcHHHHHHHHHHHhcCCC
Confidence 57999999999999999999999999 8888999999988 8899999998865 378999999999999 9
Q ss_pred CCCcEEEEcCChHHHHHHHH
Q 018088 273 KPSKCVVFEDDPRAITAAHN 292 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~ 292 (361)
.|++|+||||+..|+...+.
T Consensus 107 ~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 107 KPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CcceEEEECCCHhHHHHHHh
Confidence 99999999999999876653
No 71
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=99.54 E-value=1.4e-13 Score=122.95 Aligned_cols=119 Identities=9% Similarity=0.005 Sum_probs=92.8
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce-eEecCC
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA-IVSEED 254 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~-iv~~e~ 254 (361)
.+.+.+++......+.+.+ + ...++||+.++|+.++++|++++|+|++....+...++.+|+..+|.. +...++
T Consensus 65 ~g~~~~~l~~~~~~~~~~~---~--~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~ 139 (202)
T TIGR01490 65 AGLLEEDVRAIVEEFVNQK---I--ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED 139 (202)
T ss_pred cCCCHHHHHHHHHHHHHHH---H--HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC
Confidence 3556666655554443322 1 226799999999999999999999999999999999999999888755 222111
Q ss_pred ------------CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 255 ------------GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 255 ------------~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
.+..|+..+..++++.++++++|+++|||.+|+.+++.+|..++.
T Consensus 140 g~~~g~~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 140 GIYTGNIDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred CEEeCCccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 113366788999999999999999999999999999999988655
No 72
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.49 E-value=3.7e-14 Score=127.11 Aligned_cols=87 Identities=20% Similarity=0.253 Sum_probs=76.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChH--HHHHHHHHcCCCCCcEEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAH--RFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~--~~~~~~~klgi~p~~~v~I 280 (361)
+++|++.++|+.|++.|++++++|+.....+....+.+|+.+ .++.++.. +||+ +|..+++++++.+++|+||
T Consensus 127 ~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~---~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~~v 201 (215)
T PF00702_consen 127 PLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD---SIVFARVI--GKPEPKIFLRIIKELQVKPGEVAMV 201 (215)
T ss_dssp EBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS---EEEEESHE--TTTHHHHHHHHHHHHTCTGGGEEEE
T ss_pred cchhhhhhhhhhhhccCcceeeeecccccccccccccccccc---cccccccc--ccccchhHHHHHHHHhcCCCEEEEE
Confidence 679999999999999999999999999999999999999943 33333222 5664 7799999999999999999
Q ss_pred cCChHHHHHHHHcC
Q 018088 281 EDDPRAITAAHNCT 294 (361)
Q Consensus 281 GDs~~Di~aA~~aG 294 (361)
||+.||+.|+++||
T Consensus 202 GDg~nD~~al~~Ag 215 (215)
T PF00702_consen 202 GDGVNDAPALKAAG 215 (215)
T ss_dssp ESSGGHHHHHHHSS
T ss_pred ccCHHHHHHHHhCc
Confidence 99999999999997
No 73
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.48 E-value=1.8e-13 Score=119.14 Aligned_cols=115 Identities=9% Similarity=0.095 Sum_probs=92.6
Q ss_pred HHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 212 LDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 212 L~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
+..|++.|++++|+||.....+...++.+|+..+|+.+ ++||+.+..++++++++|++|++|||+.||+.|++
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~ 115 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMK 115 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHH
Confidence 56688899999999999999999999999999888743 58899999999999999999999999999999999
Q ss_pred HcCCeEEEEeCCCCcccccCcceEeCChhh--hHHHHHHhhHhcCC
Q 018088 292 NCTMMAVGLIGAHRAYDLVQADLAVANFNE--LSVINLRRLFANKG 335 (361)
Q Consensus 292 ~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E--L~~~ll~~l~~~~~ 335 (361)
.+|++.+. .+........|++++.+-.+ ....+.+.++.++|
T Consensus 116 ~ag~~~am--~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~il~~~~ 159 (169)
T TIGR02726 116 RVGLAVAV--GDAVADVKEAAAYVTTARGGHGAVREVAELILKAQG 159 (169)
T ss_pred HCCCeEEC--cCchHHHHHhCCEEcCCCCCCCHHHHHHHHHHHhcC
Confidence 99999776 23334444568888754332 33445555555555
No 74
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.46 E-value=6.8e-14 Score=119.37 Aligned_cols=96 Identities=14% Similarity=0.128 Sum_probs=88.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..++||+.++|+.|+ .+++++|+|++...+++..++.+++.. +|+.+++.+++...||+ |.++++++|++|++||+|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~-~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGK-YVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCe-EeecHHHcCCChhcEEEE
Confidence 467999999999998 569999999999999999999999965 56999999999999998 999999999999999999
Q ss_pred cCChHHHHHHHHcCCeEEE
Q 018088 281 EDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~ 299 (361)
||+++|+.+++++|+.+--
T Consensus 122 ~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 122 DDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred ECCHHHhhcCccCEEEecC
Confidence 9999999999999977543
No 75
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.45 E-value=1.3e-12 Score=114.15 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC-HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD-RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~-~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.++||+.++|+.|++.|++++++||+. ...+...++.+|+..++ ...+++|++|..++++++++|++|+|||
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~-------~~~KP~p~~~~~~l~~~~~~~~~~l~IG 115 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP-------HAVKPPGCAFRRAHPEMGLTSEQVAVVG 115 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc-------CCCCCChHHHHHHHHHcCCCHHHEEEEC
Confidence 679999999999999999999999998 57777777788874332 1235678899999999999999999999
Q ss_pred CCh-HHHHHHHHcCCeEEEE-eCCCCc
Q 018088 282 DDP-RAITAAHNCTMMAVGL-IGAHRA 306 (361)
Q Consensus 282 Ds~-~Di~aA~~aG~~~v~V-~g~~~~ 306 (361)
|+. .|+.+|+++|+.+|+| +|.+..
T Consensus 116 Ds~~~Di~aA~~aGi~~i~v~~g~~~~ 142 (170)
T TIGR01668 116 DRLFTDVMGGNRNGSYTILVEPLVHPD 142 (170)
T ss_pred CcchHHHHHHHHcCCeEEEEccCcCCc
Confidence 998 6999999999999999 443333
No 76
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=99.45 E-value=6.6e-14 Score=131.80 Aligned_cols=118 Identities=17% Similarity=0.194 Sum_probs=89.7
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHH-HHHHhCCCCcccceeEe---cCCCCCCC--hHHHHHHHHHcCCCCCcE
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMV-EALERMGLLKYFQAIVS---EEDGMESM--AHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~-~~L~~lgl~~~Fd~iv~---~e~~~~~K--P~~~~~~~~klgi~p~~~ 277 (361)
.++++.++++.|++.|+ ++|+||.+..... ..+...|+..+|+.+.. .+....+| |++|..+++++|++|++|
T Consensus 144 ~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~ 222 (279)
T TIGR01452 144 SYAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPART 222 (279)
T ss_pred CHHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhE
Confidence 37899999999998887 7899998764432 22334466666665543 33333345 579999999999999999
Q ss_pred EEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----------cCcceEeCChhhh
Q 018088 278 VVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----------VQADLAVANFNEL 322 (361)
Q Consensus 278 v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----------~~ad~vi~sl~EL 322 (361)
+||||+. .|+.+|+++|+.+++| +|.+...++ .+||++++++.||
T Consensus 223 lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 223 LMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999995 8999999999999999 666654433 2599999999875
No 77
>PRK11590 hypothetical protein; Provisional
Probab=99.43 E-value=1e-11 Score=112.14 Aligned_cols=174 Identities=12% Similarity=0.092 Sum_probs=113.7
Q ss_pred CceEEEEece-eccccHHHHHHHHHHHH-HHhCCCCCchHHHHHHHhcCCHHHHHHH-H---------HccCCChHHHHH
Q 018088 118 EAYGLIFSWD-VVADTRALKLNAWKQLA-FEEGKEIPQEGDVLRQILNAGADHVLHK-V---------LLWGKEESELDR 185 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~~~~~~a~~~~l-~~~G~~~~~~~~~~~~~~g~~~~~~l~~-~---------l~~~~~~~~~~~ 185 (361)
+.+++|||+| ||++. .....+..++ +++|+....... ...+.|.+....... . ...+.+..++++
T Consensus 5 ~~k~~iFD~DGTL~~~--d~~~~~~~~~~~~~g~~~~~~~~-~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 81 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQ--DMFGSFLRYLLRRQPLNLLLVLP-LLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARLQA 81 (211)
T ss_pred cceEEEEecCCCCccc--chHHHHHHHHHHhcchhhHHHhH-HHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHHHH
Confidence 4689999999 99933 3556677776 778865433222 223344433322211 1 012346666677
Q ss_pred HHHHHHHHHHHhcccCCCCCccHHHHH-HHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC----CCC--C
Q 018088 186 LNSRLTQLYYDNLLSVTEPMEGLQEWL-DAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED----GME--S 258 (361)
Q Consensus 186 l~~~~~~~~~~~l~~~~~~~pgv~elL-~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~----~~~--~ 258 (361)
+...+.+.|.+. ..++||+.+.| +.+++.|++++|+||++...++..++.+|+.. .+.+++++- .+. +
T Consensus 82 ~~~~f~~~~~~~----~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g 156 (211)
T PRK11590 82 LEADFVRWFRDN----VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLT 156 (211)
T ss_pred HHHHHHHHHHHh----CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECC
Confidence 777776666554 36799999999 57888999999999999999999999998632 333444431 100 0
Q ss_pred ---C-hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 259 ---M-AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 259 ---K-P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
. .+=...+.+.++.+...+.+.|||.+|+.|...+|-..+.
T Consensus 157 ~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 157 LRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred ccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEE
Confidence 0 1222333333466778899999999999999999987443
No 78
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.42 E-value=9.2e-13 Score=113.14 Aligned_cols=114 Identities=16% Similarity=0.192 Sum_probs=92.8
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
.|+.|+++|++++|+||.+...+...++.+|+..+|+. ..+||+.+..+++++|+++++|+||||+.+|+.|+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~-------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~ 108 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG-------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVM 108 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec-------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 68899999999999999999999999999999887763 25789999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeCChhh---hHHHHHHhhHhc
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVANFNE---LSVINLRRLFAN 333 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E---L~~~ll~~l~~~ 333 (361)
+++|+. +++.... ......|++++.+..+ +..+....+.+|
T Consensus 109 ~~ag~~-~~v~~~~-~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 109 EKVGLS-VAVADAH-PLLIPRADYVTRIAGGRGAVREVCELLLLAQ 152 (154)
T ss_pred HHCCCe-EecCCcC-HHHHHhCCEEecCCCCCcHHHHHHHHHHHhh
Confidence 999998 6653332 2333468988887653 555555555444
No 79
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.40 E-value=1e-12 Score=114.23 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=80.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHH------------HHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRR------------KMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAV 268 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~------------~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~ 268 (361)
.++||+.++|+.|+++|++++|+||+... .+...++.+|+.. +.+++++....+| |+.+..+++
T Consensus 42 ~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 42 FLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred EecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCCCCCCCccHHHHHHHH
Confidence 36899999999999999999999998653 4678899999843 5666666554445 579999999
Q ss_pred HcC--CCCCcEEEEcCCh--------HHHHHHHHcCCeEEE
Q 018088 269 KLD--RKPSKCVVFEDDP--------RAITAAHNCTMMAVG 299 (361)
Q Consensus 269 klg--i~p~~~v~IGDs~--------~Di~aA~~aG~~~v~ 299 (361)
++| ++|++|+||||+. +|+++|+++|+.+++
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 9999999999986 699999999999875
No 80
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.37 E-value=2.4e-12 Score=113.79 Aligned_cols=108 Identities=16% Similarity=0.238 Sum_probs=87.6
Q ss_pred HHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHH
Q 018088 211 WLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAA 290 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA 290 (361)
.++.|+++|++++|+||.....+...++.+|+..+|+ ....||+.+..+++++|+.|++|+||||+.+|+.++
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~-------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a 128 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ-------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVM 128 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec-------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 4666778999999999999999999999999987775 235689999999999999999999999999999999
Q ss_pred HHcCCeEEEEeCCCCcccccCcceEeC------ChhhhHHHHH
Q 018088 291 HNCTMMAVGLIGAHRAYDLVQADLAVA------NFNELSVINL 327 (361)
Q Consensus 291 ~~aG~~~v~V~g~~~~~~l~~ad~vi~------sl~EL~~~ll 327 (361)
+++|+.++ + +.........+++++. .+.|+..+++
T Consensus 129 ~~aG~~~~-v-~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~ 169 (183)
T PRK09484 129 EKVGLSVA-V-ADAHPLLLPRADYVTRIAGGRGAVREVCDLLL 169 (183)
T ss_pred HHCCCeEe-c-CChhHHHHHhCCEEecCCCCCCHHHHHHHHHH
Confidence 99999843 4 2222222346899996 5677665544
No 81
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.35 E-value=7.3e-12 Score=120.78 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=83.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCC---------------CHHHHHHHHHhCCCCcccceeE-e----cCCCCC--CC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGL---------------DRRKMVEALERMGLLKYFQAIV-S----EEDGME--SM 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~---------------~~~~~~~~L~~lgl~~~Fd~iv-~----~e~~~~--~K 259 (361)
..++||+.++|+.|+++|++++|+||. ....+...++.+|+ +|+.++ + .++... ++
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl--~fd~i~i~~~~~sd~~~~rKP~ 106 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGI--KFDEVLICPHFPEDNCSCRKPK 106 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCC--ceeeEEEeCCcCcccCCCCCCC
Confidence 478999999999999999999999995 24556777888888 366654 3 244333 45
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
|+++..++++++++|++++||||+.+|+++|+++|+.+|+|..
T Consensus 107 p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 107 TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 6799999999999999999999999999999999999999843
No 82
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.35 E-value=3e-12 Score=121.56 Aligned_cols=99 Identities=12% Similarity=0.073 Sum_probs=89.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccceeEecC-------CCCCCC--hHHHHHHHHHcC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQAIVSEE-------DGMESM--AHRFLSAAVKLD 271 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~iv~~e-------~~~~~K--P~~~~~~~~klg 271 (361)
..++||+.++|+.|+++|++++++||.+.......++.+++.+ +|+.+++.+ +....| |+++..++++++
T Consensus 186 ~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~ 265 (300)
T PHA02530 186 DKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKI 265 (300)
T ss_pred CCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHh
Confidence 3679999999999999999999999999999999999999987 999998887 233334 679999999999
Q ss_pred C-CCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 272 R-KPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 272 i-~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
. .|++|+||||+.+|+.+|+++|+.+++|
T Consensus 266 ~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 266 APKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred ccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 8 6899999999999999999999999998
No 83
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=99.32 E-value=1.8e-12 Score=120.68 Aligned_cols=124 Identities=19% Similarity=0.213 Sum_probs=100.2
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC-----CCCChHHHHHHHHHcCCCCCcEE
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG-----MESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~-----~~~KP~~~~~~~~klgi~p~~~v 278 (361)
.++++.+.++.|+..+++++++||.+.......+..+|+..+|+.+.+.... ++++|++|..++++++++|++|+
T Consensus 121 ~y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 121 SYQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred CHHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence 3678899999999999999999998877776666777888888866654332 34557899999999999999999
Q ss_pred EEcCCh-HHHHHHHHcCCeEEEE-eCCCCccc----ccCcceEeCChhhhHHHHH
Q 018088 279 VFEDDP-RAITAAHNCTMMAVGL-IGAHRAYD----LVQADLAVANFNELSVINL 327 (361)
Q Consensus 279 ~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~----l~~ad~vi~sl~EL~~~ll 327 (361)
||||+. +|+.+|+++|+.+++| +|.+...+ ..+||++++++.|+..+++
T Consensus 201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l~ 255 (257)
T TIGR01458 201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLIL 255 (257)
T ss_pred EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHHh
Confidence 999996 8999999999999999 44333221 2368999999999987654
No 84
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.31 E-value=4.9e-12 Score=121.45 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=84.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh----CCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER----MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~----lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v 278 (361)
.+++|+.++|+.|+++|+.++|+|++....+...++. +++.++|+.+..+ .++||+.+..+++++|+.+++||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~v 107 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN---WGPKSESLRKIAKKLNLGTDSFL 107 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe---cCchHHHHHHHHHHhCCCcCcEE
Confidence 3589999999999999999999999999999999999 8999999988776 45899999999999999999999
Q ss_pred EEcCChHHHHHHHHcCCe
Q 018088 279 VFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~ 296 (361)
||||++.|+.++++++-.
T Consensus 108 fidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 108 FIDDNPAERANVKITLPV 125 (320)
T ss_pred EECCCHHHHHHHHHHCCC
Confidence 999999999999997764
No 85
>PLN02645 phosphoglycolate phosphatase
Probab=99.31 E-value=2.9e-12 Score=122.56 Aligned_cols=116 Identities=14% Similarity=0.078 Sum_probs=84.2
Q ss_pred HHHHHhhCCCcEEEEeCCCHHH-HHHHHHhCCCCcccceeEecCCCC-----CCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 211 WLDAVSSARIPCAVVSGLDRRK-MVEALERMGLLKYFQAIVSEEDGM-----ESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 211 lL~~L~~~Gi~vaivSn~~~~~-~~~~L~~lgl~~~Fd~iv~~e~~~-----~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
....|+.++-..+|+||.+... ....+...|+..+|+.+.+..... +++|++|..+++++++++++|+||||+.
T Consensus 178 a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~ 257 (311)
T PLN02645 178 ATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRL 257 (311)
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCc
Confidence 3444544323577888876543 223334556666777776654422 3445799999999999999999999997
Q ss_pred -HHHHHHHHcCCeEEEE-eCCCCcccc------cCcceEeCChhhhHHHH
Q 018088 285 -RAITAAHNCTMMAVGL-IGAHRAYDL------VQADLAVANFNELSVIN 326 (361)
Q Consensus 285 -~Di~aA~~aG~~~v~V-~g~~~~~~l------~~ad~vi~sl~EL~~~l 326 (361)
+|+.+|+++|+.+++| +|.+...++ .+||++++++.+|..++
T Consensus 258 ~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~~ 307 (311)
T PLN02645 258 DTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTLK 307 (311)
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHHh
Confidence 8999999999999999 666554432 35899999999987754
No 86
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=99.30 E-value=9.4e-11 Score=109.13 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=77.1
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccccee------EecCCCCCC----------Ch-HHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAI------VSEEDGMES----------MA-HRF 263 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~i------v~~e~~~~~----------KP-~~~ 263 (361)
...+.||+.++++.|+++|++++|+|++....+...++++|+.+.+..+ ++.+....+ |. ..+
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 5688999999999999999999999999999999999999997666555 322222222 33 356
Q ss_pred HHHHHHcC--CCCCcEEEEcCChHHHHHHHHc
Q 018088 264 LSAAVKLD--RKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 264 ~~~~~klg--i~p~~~v~IGDs~~Di~aA~~a 293 (361)
+.+++.++ +.+++||+||||.+|+.||.-+
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 67889998 8999999999999999998776
No 87
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.26 E-value=6.6e-11 Score=110.48 Aligned_cols=115 Identities=12% Similarity=0.060 Sum_probs=77.2
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCC-----HHHHHHHHHhCCCCcccc--eeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLD-----RRKMVEALERMGLLKYFQ--AIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~-----~~~~~~~L~~lgl~~~Fd--~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
++++.++++.++..+..+.++++.. ........+.+++...+. ..+..-.....|+..+..+++++|+++++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~ 218 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNV 218 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHe
Confidence 5667777777777666667776643 223334444455431111 111111223459999999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
++|||+.||++|++.+|+++++ ++........||+++.+-+|
T Consensus 219 i~~GD~~NDi~m~~~ag~~vam--gna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 219 VAFGDNFNDISMLEAAGLGVAM--GNADDAVKARADLVIGDNTT 260 (272)
T ss_pred EEeCCChhhHHHHHhcCceEEe--cCchHHHHHhCCEEEecCCC
Confidence 9999999999999999986554 44443334568999887655
No 88
>PRK10444 UMP phosphatase; Provisional
Probab=99.26 E-value=5.3e-11 Score=110.14 Aligned_cols=67 Identities=12% Similarity=0.184 Sum_probs=57.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhhH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNELS 323 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL~ 323 (361)
+++|++|..++++++++|++|+||||+. .|+.+|+++|+.+++| +|.+...++ .++|++++++.|+.
T Consensus 174 KP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el~ 246 (248)
T PRK10444 174 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADID 246 (248)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHhh
Confidence 4456899999999999999999999997 7999999999999999 666655544 35999999999984
No 89
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=99.22 E-value=1.8e-10 Score=105.02 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=106.5
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHH----HHHHHHccCCChHHHHHHHHHHHHHHH
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADH----VLHKVLLWGKEESELDRLNSRLTQLYY 195 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~----~l~~~l~~~~~~~~~~~l~~~~~~~~~ 195 (361)
+|+||+| ||+|.... ..+.+.++.... ...+...+....... ++..+...+.+.+.+.+
T Consensus 2 LvvfDFD~TIvd~dsd-----~~v~~~l~~~~~-~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~---------- 65 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSD-----DWVIELLPPEEL-PEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRD---------- 65 (234)
T ss_pred EEEEeCCCCccCCccH-----HHHHHhcCCccc-HHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHH----------
Confidence 6899999 99987733 334455543321 112223332222222 33333333333332222
Q ss_pred HhcccCCCCCccHHHHHHHH--hhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC----------------
Q 018088 196 DNLLSVTEPMEGLQEWLDAV--SSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME---------------- 257 (361)
Q Consensus 196 ~~l~~~~~~~pgv~elL~~L--~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~---------------- 257 (361)
. ....++.||+.++++.+ ++.|+.++|+|++...+++..|+..|+...|+.|++......
T Consensus 66 -~-l~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~ 143 (234)
T PF06888_consen 66 -A-LRSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCS 143 (234)
T ss_pred -H-HHcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCC
Confidence 1 14558899999999999 457999999999999999999999999999998888632110
Q ss_pred C------ChHHHHHHHHH---cCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 258 S------MAHRFLSAAVK---LDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 258 ~------KP~~~~~~~~k---lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
. |-.++...... -|+.-++++|||||.||+-++.+.+-.-++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v 194 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVV 194 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEE
Confidence 0 22345555444 477889999999999999999987775333
No 90
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.22 E-value=3.8e-11 Score=90.29 Aligned_cols=67 Identities=24% Similarity=0.323 Sum_probs=57.9
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEEcCC-hHHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhh
Q 018088 256 MESMAHRFLSAAVKLDRKPSKCVVFEDD-PRAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNEL 322 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi~p~~~v~IGDs-~~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL 322 (361)
+++.|.+|..++++++++|++|+||||+ ..|+.+|+++|+.+|+| +|......+ ..||++++++.|+
T Consensus 3 gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 3 GKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp STTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 4566789999999999999999999999 78999999999999999 555555443 4799999999985
No 91
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=99.20 E-value=1.2e-10 Score=107.85 Aligned_cols=116 Identities=14% Similarity=0.094 Sum_probs=74.8
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH--H-HhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEE
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA--L-ERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~--L-~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~ 279 (361)
++.+...+..|+ +|.+ .++||.+....... + ..-.+...++...+.+.+..+| |++|..++++++++|++|+|
T Consensus 123 y~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 200 (249)
T TIGR01457 123 YEKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLM 200 (249)
T ss_pred HHHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEE
Confidence 444555555553 4555 66677544332110 0 0001112233334444443445 57999999999999999999
Q ss_pred EcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhh
Q 018088 280 FEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNEL 322 (361)
Q Consensus 280 IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL 322 (361)
|||+. .|+.+|+++|+.+++| +|.....+. ..+|++++++.++
T Consensus 201 VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 201 VGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred ECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 99997 7999999999999999 554443333 3589999998874
No 92
>PRK08238 hypothetical protein; Validated
Probab=99.18 E-value=3.7e-10 Score=113.55 Aligned_cols=94 Identities=11% Similarity=0.082 Sum_probs=77.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHH-HHHHHHHcCCCCCcEEEEc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHR-FLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~-~~~~~~klgi~p~~~v~IG 281 (361)
+.+||+.+++++++++|++++++|++++..++..++++|+ ||.++++++....||+. ...+.+.++ .++++++|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~yvG 146 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDYAG 146 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeEec
Confidence 5689999999999999999999999999999999999987 89999998876555431 122334454 35689999
Q ss_pred CChHHHHHHHHcCCeEEEEeC
Q 018088 282 DDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g 302 (361)
|+.+|+.+++.+| ..+.|++
T Consensus 147 DS~~Dlp~~~~A~-~av~Vn~ 166 (479)
T PRK08238 147 NSAADLPVWAAAR-RAIVVGA 166 (479)
T ss_pred CCHHHHHHHHhCC-CeEEECC
Confidence 9999999999999 5566643
No 93
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.16 E-value=1.6e-10 Score=97.96 Aligned_cols=90 Identities=20% Similarity=0.314 Sum_probs=80.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHHHHcCCCCCcEEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~~klgi~p~~~v~I 280 (361)
...|.+++|+.+++.+|+++.|+||+....+....+.+|+. ++.. +.|| ..|.+++++++++|++|+||
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~-----A~KP~~~~fr~Al~~m~l~~~~vvmV 116 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYR-----AKKPFGRAFRRALKEMNLPPEEVVMV 116 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeec-----ccCccHHHHHHHHHHcCCChhHEEEE
Confidence 56888999999999999999999999999999999999984 3333 4676 58999999999999999999
Q ss_pred cCChH-HHHHHHHcCCeEEEEe
Q 018088 281 EDDPR-AITAAHNCTMMAVGLI 301 (361)
Q Consensus 281 GDs~~-Di~aA~~aG~~~v~V~ 301 (361)
||..- |+.+++.+||.+|.|.
T Consensus 117 GDqL~TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 117 GDQLFTDVLGGNRAGMRTILVE 138 (175)
T ss_pred cchhhhhhhcccccCcEEEEEE
Confidence 99976 9999999999999983
No 94
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.06 E-value=2.2e-09 Score=97.76 Aligned_cols=96 Identities=13% Similarity=0.031 Sum_probs=67.6
Q ss_pred EEEEeCCCHHHHHHHHHhCCCCcccceeEe---cCCC--CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCe
Q 018088 222 CAVVSGLDRRKMVEALERMGLLKYFQAIVS---EEDG--MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 222 vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~---~e~~--~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
+.+.++.....+...++.++.. +..+.+ .+.. ...|+..+..+++++|+++++|++|||+.||+.|++.+|++
T Consensus 118 ~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~ 195 (230)
T PRK01158 118 VALRRTVPVEEVRELLEELGLD--LEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFG 195 (230)
T ss_pred eeecccccHHHHHHHHHHcCCc--EEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCce
Confidence 4455555556667777766531 222111 1212 23589999999999999999999999999999999999998
Q ss_pred EEEEeCCCCcccccCcceEeCChhh
Q 018088 297 AVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 297 ~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
+++ ++........|++++.+..+
T Consensus 196 vam--~Na~~~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 196 VAV--ANADEELKEAADYVTEKSYG 218 (230)
T ss_pred EEe--cCccHHHHHhcceEecCCCc
Confidence 766 44444444568998876554
No 95
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=99.04 E-value=1.3e-08 Score=87.30 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=96.5
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...++|++.+.|++-++.|+++.|.|+++....+....+. +|..+|+..+....+.+..-.-|.+++...|++|.++
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence 3478999999999999999999999999877777666553 5677888888886655556678999999999999999
Q ss_pred EEEcCChHHHHHHHHcCCeEEEEe--CCCCcccccCcceEeCChh
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGLI--GAHRAYDLVQADLAVANFN 320 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V~--g~~~~~~l~~ad~vi~sl~ 320 (361)
+++.|.+..+.+|+.+||.++.+. |+++..+ .+-..++.+|.
T Consensus 181 lFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d-~~~~~~~~sf~ 224 (229)
T COG4229 181 LFLSDNPEELKAAAGVGLATGLAVRPGNAPVPD-GQGFLVYKSFE 224 (229)
T ss_pred EEecCCHHHHHHHHhcchheeeeecCCCCCCCC-CcCceeeechh
Confidence 999999999999999999998773 3333222 34456666766
No 96
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=99.03 E-value=1.5e-09 Score=104.19 Aligned_cols=102 Identities=10% Similarity=0.109 Sum_probs=86.1
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC-C-------CCcccceeEecCCCC---------------
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM-G-------LLKYFQAIVSEEDGM--------------- 256 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l-g-------l~~~Fd~iv~~e~~~--------------- 256 (361)
..+.+.||+.++|+.|+++|++++|+||+...+++..++.+ | +.++||.++++..-+
T Consensus 181 ~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~ 260 (343)
T TIGR02244 181 KYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVE 260 (343)
T ss_pred HHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCC
Confidence 34567999999999999999999999999999999999996 7 899999999874311
Q ss_pred --CCC--------h-H-----HHHHHHHHcCCCCCcEEEEcCChH-HHHHHH-HcCCeEEEEe
Q 018088 257 --ESM--------A-H-----RFLSAAVKLDRKPSKCVVFEDDPR-AITAAH-NCTMMAVGLI 301 (361)
Q Consensus 257 --~~K--------P-~-----~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~-~aG~~~v~V~ 301 (361)
..+ + . ......+.+|+.+++|++|||... |+..++ .+||.+++|.
T Consensus 261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~ 323 (343)
T TIGR02244 261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAII 323 (343)
T ss_pred CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEc
Confidence 001 1 1 357788889999999999999987 999998 9999999974
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=99.03 E-value=1.4e-08 Score=91.68 Aligned_cols=119 Identities=11% Similarity=0.146 Sum_probs=83.3
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHH-HHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC-
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLD-AVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE- 253 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~-~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e- 253 (361)
.+.+.++++++...+.+.+.+. ..++||+.+.|+ .++++|++++|+||++...++...+..++..- +.+++++
T Consensus 71 ~g~~~~~l~~~~~~f~~~~~~~----~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~l 145 (210)
T TIGR01545 71 FGHREAHLQDLEADFVAAFRDK----VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQI 145 (210)
T ss_pred cCCCHHHHHHHHHHHHHHHHHh----CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEe
Confidence 4667777777777777666543 367999999996 78889999999999999999999988655332 2333432
Q ss_pred ---CCCC--C---C-hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 254 ---DGME--S---M-AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 254 ---~~~~--~---K-P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
+++. + . ++=...+.+.++.+...+.+.|||.+|+.|...||-..+.
T Consensus 146 e~~~gg~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 146 ERGNGGWVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred EEeCCceEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEE
Confidence 1111 0 0 1222233333455667889999999999999999987443
No 98
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=99.03 E-value=2.4e-10 Score=99.06 Aligned_cols=99 Identities=17% Similarity=0.140 Sum_probs=73.4
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEe-CCCHHHHHHHHHhCCCC----------cccceeEecCCCCCCChHHHHHHHHH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVS-GLDRRKMVEALERMGLL----------KYFQAIVSEEDGMESMAHRFLSAAVK 269 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivS-n~~~~~~~~~L~~lgl~----------~~Fd~iv~~e~~~~~KP~~~~~~~~k 269 (361)
...++|++.++|+.|+++|++++++| +...+.++.+|+.+++. ++|+..-. ....|-.-|..+.++
T Consensus 43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI---~~gsK~~Hf~~i~~~ 119 (169)
T PF12689_consen 43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEI---YPGSKTTHFRRIHRK 119 (169)
T ss_dssp EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEE---SSS-HHHHHHHHHHH
T ss_pred EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhhe---ecCchHHHHHHHHHh
Confidence 45789999999999999999999999 45678999999999999 78877322 234677889999999
Q ss_pred cCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 270 LDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 270 lgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
.|++.+++++|+|-..++...+..|+.++.|..
T Consensus 120 tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~ 152 (169)
T PF12689_consen 120 TGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPD 152 (169)
T ss_dssp H---GGGEEEEES-HHHHHHHHTTT-EEEE-SS
T ss_pred cCCChhHEEEecCchhcceeeEecCcEEEEeCC
Confidence 999999999999999999999999999998854
No 99
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=99.01 E-value=1.4e-09 Score=111.49 Aligned_cols=114 Identities=14% Similarity=0.160 Sum_probs=90.8
Q ss_pred CCCCccHHHHHHHHhhCCC-cEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARI-PCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi-~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..++||+.+.|+.|+++|+ +++++||.+...+...++.+|+.++|..+. +..|++ ++++++..+++|+||
T Consensus 361 d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~-----p~~K~~----~i~~l~~~~~~v~~v 431 (536)
T TIGR01512 361 DEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELL-----PEDKLE----IVKELREKYGPVAMV 431 (536)
T ss_pred ccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccC-----cHHHHH----HHHHHHhcCCEEEEE
Confidence 4689999999999999999 999999999999999999999988875332 234444 555555566899999
Q ss_pred cCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEe--CChhhhHHHH
Q 018088 281 EDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
||+.||+.++++||+...+ | .........+|+++ +++.+|..++
T Consensus 432 GDg~nD~~al~~A~vgia~--g~~~~~~~~~~ad~vl~~~~l~~l~~~i 478 (536)
T TIGR01512 432 GDGINDAPALAAADVGIAM--GASGSDVAIETADVVLLNDDLSRLPQAI 478 (536)
T ss_pred eCCHHHHHHHHhCCEEEEe--CCCccHHHHHhCCEEEECCCHHHHHHHH
Confidence 9999999999999975443 4 23333445799999 8999997643
No 100
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=99.01 E-value=1.5e-09 Score=111.76 Aligned_cols=114 Identities=14% Similarity=0.127 Sum_probs=89.0
Q ss_pred CCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..++||+.++|+.|+++| ++++++||.+...+...++++|+.++|+.+ .+..|++. +++++..+.+|+||
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~-----~p~~K~~~----v~~l~~~~~~v~~v 453 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAEL-----LPEDKLAI----VKELQEEGGVVAMV 453 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccC-----CHHHHHHH----HHHHHHcCCEEEEE
Confidence 468999999999999999 999999999999999999999998877643 12345554 44444467799999
Q ss_pred cCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHHH
Q 018088 281 EDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVIN 326 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~l 326 (361)
||+.||+.++++||+.+.+ |.........||+++. ++..+..++
T Consensus 454 GDg~nD~~al~~A~vgia~--g~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 454 GDGINDAPALAAADVGIAM--GAGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred ECChhHHHHHhhCCEeEEe--CCCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 9999999999999955443 4333333356999988 677776543
No 101
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=99.00 E-value=2.2e-09 Score=94.65 Aligned_cols=84 Identities=14% Similarity=0.155 Sum_probs=66.5
Q ss_pred ccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEe------------cCCCCCCChHHHHHH---HH
Q 018088 206 EGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVS------------EEDGMESMAHRFLSA---AV 268 (361)
Q Consensus 206 pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~------------~e~~~~~KP~~~~~~---~~ 268 (361)
|++.++|+.++++|++++|+|++....+..+++.+|+...+ ..-+. +.... .|...+..+ ..
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~K~~~l~~~~~~~~ 170 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCG-GKAEALKELYIRDE 170 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEES-HHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCC-cHHHHHHHHHHHhh
Confidence 66679999999999999999999999999999999987632 22111 00001 388877777 55
Q ss_pred HcCCCCCcEEEEcCChHHHHHHH
Q 018088 269 KLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 269 klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
+ +.....+++||||.+|+.|++
T Consensus 171 ~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 171 E-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp H-THTCCEEEEEESSGGGHHHHH
T ss_pred c-CCCCCeEEEEECCHHHHHHhC
Confidence 5 889999999999999999986
No 102
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.97 E-value=4.4e-10 Score=101.92 Aligned_cols=98 Identities=14% Similarity=0.001 Sum_probs=68.5
Q ss_pred EEEEeCCCHHHHHHHHHhCCCCccc-ceeEecCCC--CCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 222 CAVVSGLDRRKMVEALERMGLLKYF-QAIVSEEDG--MESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 222 vaivSn~~~~~~~~~L~~lgl~~~F-d~iv~~e~~--~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
..+.+......+...++.++....+ ......+.. ...|+..+.++++++|++++++++|||+.||+.|++.+|.+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~va 189 (225)
T TIGR01482 110 VKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVA 189 (225)
T ss_pred EEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEE
Confidence 3455555666777777777653111 001111222 2458899999999999999999999999999999999999877
Q ss_pred EEeCCCCcccccCcceEeCChhh
Q 018088 299 GLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 299 ~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
+ ++........|++++.+..+
T Consensus 190 m--~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 190 V--ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred c--CChhHHHHHhcCeecCCCCC
Confidence 6 44445555678988876544
No 103
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.95 E-value=1.9e-08 Score=93.56 Aligned_cols=86 Identities=16% Similarity=0.247 Sum_probs=69.6
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCccc-ceeEecCCCCCCChHHHHHHHHHcCCCCCc
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYF-QAIVSEEDGMESMAHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~F-d~iv~~e~~~~~KP~~~~~~~~klgi~p~~ 276 (361)
...++||+.++|+.|+++|++++++||.. +..+...|+.+|+..++ +.++..++ ...|+..+..+.+.+++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~-~~~K~~rr~~I~~~y~I---- 190 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD-KSSKESRRQKVQKDYEI---- 190 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC-CCCcHHHHHHHHhcCCE----
Confidence 34789999999999999999999999976 34455778889997654 56666543 46789989888888887
Q ss_pred EEEEcCChHHHHHHH
Q 018088 277 CVVFEDDPRAITAAH 291 (361)
Q Consensus 277 ~v~IGDs~~Di~aA~ 291 (361)
+++|||..+|+..+.
T Consensus 191 vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 VLLFGDNLLDFDDFF 205 (266)
T ss_pred EEEECCCHHHhhhhh
Confidence 899999999996643
No 104
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.93 E-value=5.6e-09 Score=107.62 Aligned_cols=113 Identities=15% Similarity=0.146 Sum_probs=86.7
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.+++||+.++|+.|++.|++++++|+.....++..++.+|+. +| .+..+..|++.+. ++...+++|+|||
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-~~-----~~~~p~~K~~~v~----~l~~~~~~v~~VG 473 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-VR-----AEVLPDDKAALIK----ELQEKGRVVAMVG 473 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-EE-----ccCChHHHHHHHH----HHHHcCCEEEEEe
Confidence 367999999999999999999999999999999999999995 22 2222334554444 4444678999999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
|+.||+.++++||++..+ +.........+|+++ +++.++..++
T Consensus 474 Dg~nD~~al~~A~vgia~--g~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 474 DGINDAPALAQADVGIAI--GAGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred CCCccHHHHhhCCEEEEe--CCcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 999999999999976433 433333445689998 4888877654
No 105
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=98.92 E-value=4.9e-09 Score=97.37 Aligned_cols=69 Identities=22% Similarity=0.198 Sum_probs=58.5
Q ss_pred Ch--HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCcccc----cCcceEeCChhhhHHHHH
Q 018088 259 MA--HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYDL----VQADLAVANFNELSVINL 327 (361)
Q Consensus 259 KP--~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~l----~~ad~vi~sl~EL~~~ll 327 (361)
|| .+|..++++++..+++|+||||+.. ||.+|+++||.++.| +|.+..++. ..++++++++.++...+.
T Consensus 190 KP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~ 266 (269)
T COG0647 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALK 266 (269)
T ss_pred CCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhh
Confidence 55 4899999999999999999999987 999999999999999 666655543 358999999999886643
No 106
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=98.92 E-value=3.3e-08 Score=86.32 Aligned_cols=119 Identities=20% Similarity=0.194 Sum_probs=90.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---------------HHHHHHHHHhCCCCcccceeEecC-------CCCCCCh
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---------------RRKMVEALERMGLLKYFQAIVSEE-------DGMESMA 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---------------~~~~~~~L~~lgl~~~Fd~iv~~e-------~~~~~KP 260 (361)
.+.||+.+.+..|++.|++++++||.+ ...+...|+..|+ .||.++..- +.-++||
T Consensus 31 ~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv--~id~i~~Cph~p~~~c~cRKP~~ 108 (181)
T COG0241 31 QFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGV--KIDGILYCPHHPEDNCDCRKPKP 108 (181)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcccCCCh
Confidence 679999999999999999999999932 3335555666676 566666542 2223456
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE-eCCCCcc-cccCcceEeCChhhhH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL-IGAHRAY-DLVQADLAVANFNELS 323 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V-~g~~~~~-~l~~ad~vi~sl~EL~ 323 (361)
-.+..+++++++++++.++|||...|+++|.++|+..+.+ .+..... .....+++.+++.++.
T Consensus 109 gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 109 GMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred HHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 7999999999999999999999999999999999997665 3322211 1125678888888877
No 107
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.91 E-value=8.6e-10 Score=101.67 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=79.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccccee--EecCCCCCCC--hHHHHHHHHHcCCC-CCcEEE
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAI--VSEEDGMESM--AHRFLSAAVKLDRK-PSKCVV 279 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~i--v~~e~~~~~K--P~~~~~~~~klgi~-p~~~v~ 279 (361)
++++.++++.|.++|+++ ++||.+..+....+..+|...+|+.+ .+.+....+| |+.|..++++++.. +++|+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 789999999998899997 88999888777677777877777754 4554433445 67999999999975 679999
Q ss_pred EcCC-hHHHHHHHHcCCeEEEEe
Q 018088 280 FEDD-PRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 280 IGDs-~~Di~aA~~aG~~~v~V~ 301 (361)
|||+ .+|+.+|+++|+.+++|.
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999 589999999999999874
No 108
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=98.90 E-value=1.5e-08 Score=89.47 Aligned_cols=100 Identities=11% Similarity=0.105 Sum_probs=75.1
Q ss_pred CCCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC-----------------CChH-
Q 018088 201 VTEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME-----------------SMAH- 261 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~-----------------~KP~- 261 (361)
..+..||+.++++.+++.| +.+.|+|.++..+++..|+.+|+.+.|+.|++...... .-|.
T Consensus 82 ~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 82 SIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred cCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchh
Confidence 4588999999999999998 59999999999999999999999999998887642110 0121
Q ss_pred -----HHHH---HHHHcCCCCCcEEEEcCChHHHHHHHHcCC-eEEEE
Q 018088 262 -----RFLS---AAVKLDRKPSKCVVFEDDPRAITAAHNCTM-MAVGL 300 (361)
Q Consensus 262 -----~~~~---~~~klgi~p~~~v~IGDs~~Di~aA~~aG~-~~v~V 300 (361)
.+.+ -..+-|+.-++.+|+||+.||+........ ..++-
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 2222 223347778899999999999776665544 44443
No 109
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.88 E-value=1.3e-09 Score=98.43 Aligned_cols=99 Identities=13% Similarity=-0.006 Sum_probs=70.4
Q ss_pred cEEEEeCCCHHHHHHHHHhCCCCcccce-eEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 221 PCAVVSGLDRRKMVEALERMGLLKYFQA-IVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 221 ~vaivSn~~~~~~~~~L~~lgl~~~Fd~-iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
.++++++.....+...++..++..++.. .+..-.....|...+..+++++|++++++++|||+.||+.|++.+|+.+++
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam 188 (215)
T TIGR01487 109 LVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV 188 (215)
T ss_pred EEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc
Confidence 3445566666777777777766443221 111112234688999999999999999999999999999999999999777
Q ss_pred EeCCCCcccccCcceEeCChhh
Q 018088 300 LIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 300 V~g~~~~~~l~~ad~vi~sl~E 321 (361)
++..+.....|++++.+-.+
T Consensus 189 --~na~~~~k~~A~~v~~~~~~ 208 (215)
T TIGR01487 189 --ANADDQLKEIADYVTSNPYG 208 (215)
T ss_pred --CCccHHHHHhCCEEcCCCCC
Confidence 34444444568888875443
No 110
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=98.87 E-value=2.6e-08 Score=86.12 Aligned_cols=91 Identities=13% Similarity=0.134 Sum_probs=69.9
Q ss_pred CCccHHHHHHHHhhCCCc--EEEEeCC-------CHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCC--
Q 018088 204 PMEGLQEWLDAVSSARIP--CAVVSGL-------DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDR-- 272 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~--vaivSn~-------~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi-- 272 (361)
+.|.+.+++++|++.+.. ++||||+ ....++..-+.+|+. .+... ..||..+..+.+.++.
T Consensus 60 i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~----~kKP~~~~~i~~~~~~~~ 131 (168)
T PF09419_consen 60 IPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHR----AKKPGCFREILKYFKCQK 131 (168)
T ss_pred CCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeC----CCCCccHHHHHHHHhhcc
Confidence 355566778888887654 9999997 366677777888863 22222 4689878788877764
Q ss_pred ---CCCcEEEEcCChH-HHHHHHHcCCeEEEEeC
Q 018088 273 ---KPSKCVVFEDDPR-AITAAHNCTMMAVGLIG 302 (361)
Q Consensus 273 ---~p~~~v~IGDs~~-Di~aA~~aG~~~v~V~g 302 (361)
.|+++++|||-.- |+.+|...|+.+|+|..
T Consensus 132 ~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~ 165 (168)
T PF09419_consen 132 VVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD 165 (168)
T ss_pred CCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence 4999999999986 99999999999999853
No 111
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.86 E-value=2.8e-08 Score=93.23 Aligned_cols=82 Identities=15% Similarity=0.202 Sum_probs=57.5
Q ss_pred HHhhCCCcEEEE---eCCCHHHHHHHHHhCCCC----cccceeEecCCCCCCChHHHHHHHHHcCCCC-CcEEEEcCChH
Q 018088 214 AVSSARIPCAVV---SGLDRRKMVEALERMGLL----KYFQAIVSEEDGMESMAHRFLSAAVKLDRKP-SKCVVFEDDPR 285 (361)
Q Consensus 214 ~L~~~Gi~vaiv---Sn~~~~~~~~~L~~lgl~----~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p-~~~v~IGDs~~ 285 (361)
.++..++..+++ +......+...++..++. .+|..++.. . .|...+.++++.+|+++ ++|++|||+.|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~---~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~N 218 (273)
T PRK00192 143 LAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGG---G-DKGKAVRWLKELYRRQDGVETIALGDSPN 218 (273)
T ss_pred HHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCC---C-CHHHHHHHHHHHHhccCCceEEEEcCChh
Confidence 344555555555 433344455555555553 222222222 3 67889999999999999 99999999999
Q ss_pred HHHHHHHcCCeEEE
Q 018088 286 AITAAHNCTMMAVG 299 (361)
Q Consensus 286 Di~aA~~aG~~~v~ 299 (361)
|+.|++.+|.++++
T Consensus 219 Di~m~~~ag~~vam 232 (273)
T PRK00192 219 DLPMLEAADIAVVV 232 (273)
T ss_pred hHHHHHhCCeeEEe
Confidence 99999999999887
No 112
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=98.80 E-value=2.2e-09 Score=92.90 Aligned_cols=99 Identities=10% Similarity=0.112 Sum_probs=88.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc-ccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK-YFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~-~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
+...||+.++|+.|.+. ++++|.|++.+.++..+++.++... +|+.+++.+.....++. +.+.+.++|.++++||+|
T Consensus 41 v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~-~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGK-YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCC-EEeEchhcCCChhhEEEE
Confidence 36799999999999988 9999999999999999999999876 89999998887666665 677788899999999999
Q ss_pred cCChHHHHHHHHcCCeEEEEeC
Q 018088 281 EDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v~V~g 302 (361)
||++.++.++..+|+.+....|
T Consensus 119 DD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 119 DNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred eCChhhhccCccCEeecCCCCC
Confidence 9999999999999988776544
No 113
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=98.80 E-value=1.1e-07 Score=91.44 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=53.2
Q ss_pred CCh--HHHHHHHHHc--------CC-----CCCcEEEEcCCh-HHHHHHHHcCCeEEEE-eCCCCcccc---cCcceEeC
Q 018088 258 SMA--HRFLSAAVKL--------DR-----KPSKCVVFEDDP-RAITAAHNCTMMAVGL-IGAHRAYDL---VQADLAVA 317 (361)
Q Consensus 258 ~KP--~~~~~~~~kl--------gi-----~p~~~v~IGDs~-~Di~aA~~aG~~~v~V-~g~~~~~~l---~~ad~vi~ 317 (361)
+|| ..|..+++.+ ++ ++++++||||++ .|+.+|+++|+.+++| +|.....+. ..++++++
T Consensus 232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~vv~ 311 (321)
T TIGR01456 232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLIVN 311 (321)
T ss_pred CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEEEC
Confidence 465 5788877777 43 457999999998 6999999999999999 443333222 25899999
Q ss_pred ChhhhHHHH
Q 018088 318 NFNELSVIN 326 (361)
Q Consensus 318 sl~EL~~~l 326 (361)
++.|+...+
T Consensus 312 ~l~e~~~~i 320 (321)
T TIGR01456 312 DVFDAVTKI 320 (321)
T ss_pred CHHHHHHHh
Confidence 999998765
No 114
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.78 E-value=1.7e-08 Score=102.24 Aligned_cols=90 Identities=10% Similarity=0.169 Sum_probs=77.3
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCH------------HHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDR------------RKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVK 269 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~------------~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~k 269 (361)
++||+.+.|+.|++.|++++|+||... ..+..+++.+|+ .|+.+++.+....+| |.++..++++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi--pfdviia~~~~~~RKP~pGm~~~a~~~ 275 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV--PFQVFIAIGAGFYRKPLTGMWDHLKEE 275 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC--ceEEEEeCCCCCCCCCCHHHHHHHHHh
Confidence 589999999999999999999999655 457888899998 489888887766666 4699999999
Q ss_pred cC----CCCCcEEEEcCChHHHHHHHHcCC
Q 018088 270 LD----RKPSKCVVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 270 lg----i~p~~~v~IGDs~~Di~aA~~aG~ 295 (361)
++ +++++++||||+..|+.+++++|.
T Consensus 276 ~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 276 ANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred cCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 85 899999999999989888777775
No 115
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.76 E-value=5.9e-09 Score=97.15 Aligned_cols=63 Identities=17% Similarity=0.070 Sum_probs=51.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++++|+++++|++|||+.||++|.+.+|.++++ ++..+.....|+++..+-++
T Consensus 188 ~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam--~Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 188 VSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM--GNADEELKELADYVTTSNDE 250 (264)
T ss_pred CchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec--cCCCHHHHhhCCcccCCccc
Confidence 3488899999999999999999999999999999999999777 45544445567766565544
No 116
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.73 E-value=7.1e-09 Score=97.08 Aligned_cols=63 Identities=8% Similarity=0.017 Sum_probs=51.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcce--EeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADL--AVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~--vi~sl~E 321 (361)
..|...+..+++.+|+++++|++|||+.||++|.+.+|.+.++ ++........|++ ++.+.+|
T Consensus 187 ~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm--~Na~~~vK~~A~~~~v~~~n~e 251 (272)
T PRK15126 187 CNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM--GNAMPQLRAELPHLPVIGHCRN 251 (272)
T ss_pred CChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec--cCChHHHHHhCCCCeecCCCcc
Confidence 4589999999999999999999999999999999999998777 4444555556664 6655444
No 117
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=98.73 E-value=4.9e-08 Score=90.43 Aligned_cols=68 Identities=18% Similarity=0.226 Sum_probs=55.1
Q ss_pred CCh--HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCccc--------ccCcceEeCChhhhHHH
Q 018088 258 SMA--HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYD--------LVQADLAVANFNELSVI 325 (361)
Q Consensus 258 ~KP--~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~--------l~~ad~vi~sl~EL~~~ 325 (361)
+|| .++..+.+++++.|++|+||||+.+ ||.-++++|+++++| +|.+..++ ...||++++++.++...
T Consensus 223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~~~~ 302 (306)
T KOG2882|consen 223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDLLPL 302 (306)
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHHhhh
Confidence 355 4889999999999999999999998 999999999999988 55553222 12488988888887654
No 118
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.73 E-value=4.8e-08 Score=105.28 Aligned_cols=114 Identities=10% Similarity=0.045 Sum_probs=90.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
+++||+.+.|+.|++.|++++++|+.....+....+.+|+.++|..+ .|+.-..++++++..+++|+||||
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~---------~p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV---------LPDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC---------CHHHHHHHHHHHhhcCCEEEEEeC
Confidence 67999999999999999999999999999999999999997655432 244444566677777889999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcc--eEeCChhhhHHHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQAD--LAVANFNELSVINL 327 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad--~vi~sl~EL~~~ll 327 (361)
+.||+.++++||++..+ |.+.......+| +..+++.++..++.
T Consensus 721 g~nD~~al~~Agvgia~--g~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 721 GINDAPALAQADVGIAM--GGGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred CHHHHHHHHhCCeeEEe--cCCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 99999999999996554 444444444455 45578888887665
No 119
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.71 E-value=5.6e-08 Score=90.75 Aligned_cols=63 Identities=16% Similarity=0.058 Sum_probs=54.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++.+|++++++++|||+.||++|.+.+|.++++ ++..+.....|++++.+.++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm--~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM--GNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe--cCccHHHHHhcCeeccCCCc
Confidence 4589999999999999999999999999999999999998777 55555556679999876544
No 120
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=98.70 E-value=3.1e-08 Score=91.30 Aligned_cols=92 Identities=15% Similarity=0.194 Sum_probs=77.8
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHH--HHHHhCCCCc-ccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV--EALERMGLLK-YFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~--~~L~~lgl~~-~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...++||+.++|+.|+++|++++++||+.+.... ..++.+|+.. +|+.+++++++. .+.+..+++++++.|++|
T Consensus 22 ~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~---~~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 22 GNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA---VQMILESKKRFDIRNGII 98 (242)
T ss_pred CCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH---HHHHHhhhhhccCCCceE
Confidence 3478999999999999999999999998877655 7889999998 999999986532 256777788899999999
Q ss_pred EEEcCChHHHHHHHHcCC
Q 018088 278 VVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~ 295 (361)
++|||+..|+.....+|.
T Consensus 99 ~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 99 YLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEeCCcccchhhhcCCCc
Confidence 999999999887765554
No 121
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=98.69 E-value=1e-07 Score=87.63 Aligned_cols=45 Identities=18% Similarity=0.242 Sum_probs=40.7
Q ss_pred CCChHHHHHHHHHcCCCCCcE-EEEcCCh-HHHHHHHHcCCeEEEEe
Q 018088 257 ESMAHRFLSAAVKLDRKPSKC-VVFEDDP-RAITAAHNCTMMAVGLI 301 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~-v~IGDs~-~Di~aA~~aG~~~v~V~ 301 (361)
+++|+.|..+++++++.++++ +||||+. .|+.+|+++|+.+++|.
T Consensus 188 KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 188 KPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred CCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 455789999999999999887 9999998 79999999999999983
No 122
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=98.67 E-value=1.5e-07 Score=76.64 Aligned_cols=121 Identities=12% Similarity=0.141 Sum_probs=95.4
Q ss_pred cCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 200 SVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
...++++.+.+.+++|++. +.++|+|+...-.+.+.++..|+. .+.++.+ ..|+.-..++..++-+-+.|+|
T Consensus 27 tgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~-----a~~e~K~~ii~eLkk~~~k~vm 98 (152)
T COG4087 27 TGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIP--VERVFAG-----ADPEMKAKIIRELKKRYEKVVM 98 (152)
T ss_pred cCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCc--eeeeecc-----cCHHHHHHHHHHhcCCCcEEEE
Confidence 3457899999999999999 999999999989999999999873 2344443 3366666677777777789999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCC-CCcccccCcceEeCChhhhHHHHHH
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGA-HRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
|||+.||+.|.++|-++.+-+... .+...+..||+++.+..|+.+++.+
T Consensus 99 VGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 99 VGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred ecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 999999999999998876555333 3344456799999999999887543
No 123
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=98.67 E-value=9.3e-08 Score=103.57 Aligned_cols=123 Identities=14% Similarity=0.149 Sum_probs=97.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC------------------CChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME------------------SMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~------------------~KP~~~~ 264 (361)
+++||+.+.++.|++.|++++++||.....+....+.+|+...++.++++++... ..|+--.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~ 607 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKM 607 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHH
Confidence 6799999999999999999999999999999999999999887777766654321 3476556
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC-CCcccccCcceEe--CChhhhHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA-HRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
.+.+.++...+.|.|+||+.||+.|+++|+++..+ |. +..-....||+++ +++..+...+.
T Consensus 608 ~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~--g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 608 KIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM--GQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred HHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec--CCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 66666666668899999999999999999976444 32 2223335689999 66888876544
No 124
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=98.67 E-value=6.6e-08 Score=84.73 Aligned_cols=74 Identities=24% Similarity=0.331 Sum_probs=62.3
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHcCCeEEEE-eCCCCccccc----CcceEeCChhhhHHHHHHhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNCTMMAVGL-IGAHRAYDLV----QADLAVANFNELSVINLRRL 330 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~aG~~~v~V-~g~~~~~~l~----~ad~vi~sl~EL~~~ll~~l 330 (361)
++.|..|..++..+|++|+++|||||..+ |+..|..+||..|.| +|...+.+.. .||.++++|.+-..++++..
T Consensus 181 KP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd~I~q~~ 260 (262)
T KOG3040|consen 181 KPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVDLIIQNG 260 (262)
T ss_pred CCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHHHHHhhc
Confidence 34456899999999999999999999998 899999999999999 6766653332 47899999999988887654
No 125
>PLN02887 hydrolase family protein
Probab=98.67 E-value=2.1e-08 Score=102.83 Aligned_cols=63 Identities=13% Similarity=0.050 Sum_probs=54.5
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++.+|+++++|++|||+.||++|.+.||.++++ +++.......||+++.+.+|
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM--gNA~eeVK~~Ad~VT~sNdE 568 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL--SNGAEKTKAVADVIGVSNDE 568 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe--CCCCHHHHHhCCEEeCCCCc
Confidence 4589999999999999999999999999999999999998777 55555556679999876554
No 126
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.56 E-value=1.6e-07 Score=87.95 Aligned_cols=63 Identities=10% Similarity=-0.002 Sum_probs=49.1
Q ss_pred CCChHHHHHHHHHcCC---CCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCc-ccc----cCcceEeCChh
Q 018088 257 ESMAHRFLSAAVKLDR---KPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRA-YDL----VQADLAVANFN 320 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi---~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~-~~l----~~ad~vi~sl~ 320 (361)
..|...+..+++.+|+ +++++++|||+.||++|.+.+|.++++ .+.... ..+ ..++++.+..+
T Consensus 186 ~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 186 AGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred CCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCCceEeccCCC
Confidence 4588999999999999 999999999999999999999988766 222212 122 25777777655
No 127
>PTZ00445 p36-lilke protein; Provisional
Probab=98.56 E-value=3.6e-07 Score=81.07 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=76.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH---------------HHHHHHHHhCCCCcccceeEecCC-----------CC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR---------------RKMVEALERMGLLKYFQAIVSEED-----------GM 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~---------------~~~~~~L~~lgl~~~Fd~iv~~e~-----------~~ 256 (361)
.+.|.+..|+.+|++.|++++|||=++. +.+...|+.-+-..-...+++... .+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 4688899999999999999999996654 356777776544333333433211 11
Q ss_pred CCCh--HH--H--HHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 257 ESMA--HR--F--LSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 257 ~~KP--~~--~--~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
..|| ++ | ..+++++|+.|++|++|+|...++++|++.|+.++.+.+
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 2254 46 7 999999999999999999999999999999999998754
No 128
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.56 E-value=5.1e-08 Score=81.85 Aligned_cols=97 Identities=15% Similarity=0.219 Sum_probs=79.0
Q ss_pred HHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 212 LDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 212 L~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
++.|.+.|++++|+|+.....++...+.+|+..+|..+ ..|-..|..+++++++.+++|.++||..+|+.+.+
T Consensus 44 ik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~-------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~ 116 (170)
T COG1778 44 IKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI-------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVME 116 (170)
T ss_pred HHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech-------HhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHH
Confidence 56678899999999999999999999999997666433 35778999999999999999999999999999999
Q ss_pred HcCCeEEEEeCCCCcccccCcceEeC
Q 018088 292 NCTMMAVGLIGAHRAYDLVQADLAVA 317 (361)
Q Consensus 292 ~aG~~~v~V~g~~~~~~l~~ad~vi~ 317 (361)
++|.+++. . ...+.....++++.+
T Consensus 117 ~vGls~a~-~-dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 117 KVGLSVAV-A-DAHPLLKQRADYVTS 140 (170)
T ss_pred HcCCcccc-c-ccCHHHHHhhHhhhh
Confidence 99998554 1 222333345666654
No 129
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.54 E-value=2.6e-07 Score=86.20 Aligned_cols=56 Identities=21% Similarity=0.256 Sum_probs=52.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA 260 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP 260 (361)
-||+.++|++|+++|++++|+|++.+..+...++.+|+..+|+.++++++....||
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp 203 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYS 203 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCC
Confidence 48899999999999999999999999999999999999999999999988776665
No 130
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.52 E-value=1.1e-07 Score=88.08 Aligned_cols=63 Identities=19% Similarity=0.074 Sum_probs=51.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
..|...+..+++.+|+++++|++|||+.||+.|++.+|+.+++ ++........|++++.+.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~--~na~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM--GNADEELKALADYVTDSNNE 249 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe--cCchHHHHHhCCEEecCCCC
Confidence 4588999999999999999999999999999999999998666 33344444568888876554
No 131
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=98.49 E-value=9.9e-07 Score=93.79 Aligned_cols=110 Identities=13% Similarity=0.100 Sum_probs=83.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
+++||+.+.++.|++.|++++++|+.....+....+.+|+..++ +..+..|++.+.. ++ .+..|+||||
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~------~~~p~~K~~~v~~----l~-~~~~v~mvGD 636 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRA------GLLPEDKVKAVTE----LN-QHAPLAMVGD 636 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeec------CCCHHHHHHHHHH----Hh-cCCCEEEEEC
Confidence 67999999999999999999999999999999999999996332 2233446664444 33 2368999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHH
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVI 325 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ 325 (361)
+.||..+++.|+++.++ +.+.......+|+++ +++.+|...
T Consensus 637 giNDapAl~~A~vgia~--g~~~~~a~~~adivl~~~~l~~l~~~ 679 (741)
T PRK11033 637 GINDAPAMKAASIGIAM--GSGTDVALETADAALTHNRLRGLAQM 679 (741)
T ss_pred CHHhHHHHHhCCeeEEe--cCCCHHHHHhCCEEEecCCHHHHHHH
Confidence 99999999999976555 444443344567665 567777644
No 132
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=98.42 E-value=3.2e-06 Score=72.90 Aligned_cols=188 Identities=13% Similarity=0.053 Sum_probs=111.6
Q ss_pred EEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcC--CHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 121 GLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNA--GADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 121 ~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~--~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
.++.|+| |+.-.. ..+-+...+|...-. .+...+... ..++.+.++++.-.... +...+.
T Consensus 5 vi~sDFDGTITl~D-----s~~~itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~----------~Eile~ 67 (220)
T COG4359 5 VIFSDFDGTITLND-----SNDYITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSL----------EEILEF 67 (220)
T ss_pred EEEecCCCceEecc-----hhHHHHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCH----------HHHHHH
Confidence 6888999 886444 334444555533211 222222222 23444444443322211 111222
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce--eEecC---------------CC--CCC
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA--IVSEE---------------DG--MES 258 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~--iv~~e---------------~~--~~~ 258 (361)
+.....+.||.+++++.+++++++++|+|++...++..+++.++-.+..+. +++.+ +. +.-
T Consensus 68 llk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~d 147 (220)
T COG4359 68 LLKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHD 147 (220)
T ss_pred HHhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCC
Confidence 233458899999999999999999999999999999999999863322221 22221 11 112
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCC--cccccCcceEeCChhhhHHHHHHhhH
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHR--AYDLVQADLAVANFNELSVINLRRLF 331 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~--~~~l~~ad~vi~sl~EL~~~ll~~l~ 331 (361)
|+. .++.+.-+++.++|.|||..|+.+|+..-.-.+- ..-. -.+.....+...++.|+..-+.+.++
T Consensus 148 K~~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK--~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl~ 216 (220)
T COG4359 148 KSS----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAK--DDLLNYCREQNLNFLEFETFYEILKEIEKVLE 216 (220)
T ss_pred cch----hHHHhhcCCceEEEecCCcccccHhhhhhhHhhH--HHHHHHHHHcCCCCcccccHHHHHHHHHHHHh
Confidence 443 4455555778899999999999999987654321 0000 01112356777888888877766664
No 133
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.40 E-value=6.2e-07 Score=82.20 Aligned_cols=60 Identities=13% Similarity=-0.027 Sum_probs=48.1
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcc----eEeCC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQAD----LAVAN 318 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad----~vi~s 318 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.+|.+.++ ++...+....++ +++++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav--~na~~~~k~~a~~~~~~v~~~ 221 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV--GNHDPELEGLRHQQRIYFANN 221 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE--cCCcHHHHHhhcCCcEEEcCC
Confidence 4689999999999999999999999999999999999988655 444444444566 55554
No 134
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=98.38 E-value=2.3e-06 Score=93.15 Aligned_cols=123 Identities=11% Similarity=0.115 Sum_probs=90.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc----cceeEecCCC-----------------C-CCCh
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY----FQAIVSEEDG-----------------M-ESMA 260 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~----Fd~iv~~e~~-----------------~-~~KP 260 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+... ....+++.+. . ...|
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P 616 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEP 616 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCH
Confidence 6899999999999999999999999999999999999998541 1122332111 0 1235
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC--hhhhHHHHH
Q 018088 261 HRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN--FNELSVINL 327 (361)
Q Consensus 261 ~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s--l~EL~~~ll 327 (361)
+--..+++.++...+.|.|+||+.||+.|.+.|+++.++ +.+.......||+++.+ +..+...+.
T Consensus 617 ~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~--g~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 617 SHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM--GSGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred HHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC--CCCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 544556666666667888999999999999999987544 33333333469999987 888877654
No 135
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=98.34 E-value=3.2e-06 Score=88.27 Aligned_cols=120 Identities=13% Similarity=0.120 Sum_probs=92.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.||+++.+++|++.|+++.++|+.....+...-+.+|++++|. .-+|+--..+.++++-.-+-|.|+||
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~A---------~~~PedK~~iV~~lQ~~G~~VaMtGD 511 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFVA---------ECKPEDKINVIREEQAKGHIVAMTGD 511 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEEc---------CCCHHHHHHHHHHHHhCCCEEEEECC
Confidence 679999999999999999999999999999999999999975432 34677555566666555567889999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH--HhhHhc
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL--RRLFAN 333 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll--~~l~~~ 333 (361)
+.||..+.+.|.++.++ +.+.....+.+|.++ +++..+...+. ++.|.|
T Consensus 512 GvNDAPALa~ADVGIAM--gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n 564 (673)
T PRK14010 512 GTNDAPALAEANVGLAM--NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564 (673)
T ss_pred ChhhHHHHHhCCEEEEe--CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999988665 444444445688777 46777766544 355444
No 136
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.29 E-value=3.5e-06 Score=78.81 Aligned_cols=50 Identities=20% Similarity=0.184 Sum_probs=47.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED 254 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~ 254 (361)
.|++.++|++|+++|++++|+||+.+..+...++.+|+..+|+.+++++.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 48889999999999999999999999999999999999999999998875
No 137
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=98.29 E-value=3.4e-06 Score=88.01 Aligned_cols=122 Identities=11% Similarity=0.120 Sum_probs=88.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.||+.+.++.|++.|+++.++|+.+...+....+.+|+++++. .-+|+--..+.+++.-....+.|+||
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~a---------~~~PedK~~~v~~lq~~g~~VamvGD 516 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIA---------EATPEDKIALIRQEQAEGKLVAMTGD 516 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEEc---------CCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 679999999999999999999999999999999999999965432 23454333333333333457999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHHHH--HhhHhcCC
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVINL--RRLFANKG 335 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ll--~~l~~~~~ 335 (361)
+.||..+.+.|+++.++ +.+.......+|+++- ++..+...+. ++++.++|
T Consensus 517 G~NDapAL~~AdvGiAm--~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~ 571 (675)
T TIGR01497 517 GTNDAPALAQADVGVAM--NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRG 571 (675)
T ss_pred CcchHHHHHhCCEeEEe--CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988666 3444444456787764 5666665443 34444443
No 138
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.26 E-value=1.1e-05 Score=74.70 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=40.1
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEe
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~ 301 (361)
..|+..+..+++++|+++++|++|||+.||+.|++.++..++++.
T Consensus 166 ~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~ 210 (249)
T TIGR01485 166 SGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS 210 (249)
T ss_pred CChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEEC
Confidence 468899999999999999999999999999999999776666663
No 139
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.24 E-value=5.1e-05 Score=69.02 Aligned_cols=162 Identities=12% Similarity=-0.016 Sum_probs=97.2
Q ss_pred CCCcccchhhhHHHHHHhHHHHHhhhcCCCCceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCH
Q 018088 88 DGPLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGA 166 (361)
Q Consensus 88 ~g~l~~dv~~~~~~~~~~~~~rir~~m~~~~~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~ 166 (361)
.|.-+.|+..+.+......... ....+...+||||+| |++++.+..... .+|...-....+
T Consensus 49 ~~~Y~~D~~~v~~~a~~y~~~~---~~~~dg~~A~V~DIDET~LsN~py~~~~------~~g~~~~~~~~~--------- 110 (229)
T TIGR01675 49 SKQYKRDVKRVVDEAYFYAKSL---ALSGDGMDAWIFDVDDTLLSNIPYYKKH------GYGTEKTDPTAF--------- 110 (229)
T ss_pred ccccHHHHHHHHHHHHHHHHHh---hccCCCCcEEEEccccccccCHHHHHHh------ccCCCcCCHHHH---------
Confidence 3477788888777665443333 122456789999999 999887432111 112111000000
Q ss_pred HHHHHHHHccCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHH---HHHHHHhCCCC
Q 018088 167 DHVLHKVLLWGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRK---MVEALERMGLL 243 (361)
Q Consensus 167 ~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~---~~~~L~~lgl~ 243 (361)
.. + .. ....++.|++.++++.|+++|++++++||..... +...|...|+.
T Consensus 111 ----~~-----------------w---v~---~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 111 ----WL-----------------W---LG---KGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred ----HH-----------------H---HH---cCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 00 0 00 1344789999999999999999999999987555 67778888886
Q ss_pred cccceeEecCCCCCC------ChHHHHHHHH-HcCCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 244 KYFQAIVSEEDGMES------MAHRFLSAAV-KLDRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 244 ~~Fd~iv~~e~~~~~------KP~~~~~~~~-klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.+ +.++--...... |-+....+.+ .+.| +..|||..+|+.. ..+|..++-+
T Consensus 164 ~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI----v~~iGDq~sDl~G-~~~~~RtFKL 221 (229)
T TIGR01675 164 GW-KHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI----WGNIGDQWSDLLG-SPPGRRTFKL 221 (229)
T ss_pred Cc-CeeeecCCCCCCchHhHHHHHHHHHHHhCCceE----EEEECCChHHhcC-CCccCceeeC
Confidence 55 555544322223 3333333332 1222 5689999999955 3455555543
No 140
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=98.21 E-value=8.2e-06 Score=85.34 Aligned_cols=123 Identities=11% Similarity=0.113 Sum_probs=94.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.||+++.+++|++.|+++.++|+.+...+...-+.+|++++|. .-+|+--..+.++++-..+-|.|+||
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v~A---------~~~PedK~~iV~~lQ~~G~~VaMtGD 515 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFLA---------EATPEDKLALIRQEQAEGRLVAMTGD 515 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEEEc---------cCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 579999999999999999999999999999999999999965332 24676555555555545566899999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHHHH--HhhHhcCCC
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVINL--RRLFANKGS 336 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ll--~~l~~~~~~ 336 (361)
+.||..+.+.|.++.++ +.+..-..+.+|.++- ++..+...+. ++++-.+|.
T Consensus 516 GvNDAPALa~ADVGIAM--gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~ 571 (679)
T PRK01122 516 GTNDAPALAQADVGVAM--NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGA 571 (679)
T ss_pred CcchHHHHHhCCEeEEe--CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHh
Confidence 99999999999988666 4444444456887764 6777776554 455555554
No 141
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=98.19 E-value=1.9e-05 Score=70.11 Aligned_cols=112 Identities=17% Similarity=0.193 Sum_probs=69.9
Q ss_pred ccCCCCCccHHHHHHHHhhCCCcEEEEeCCCH-------HHHHHHHHhC-CCCcccceeEecCCCCCCChHHHHHHHHHc
Q 018088 199 LSVTEPMEGLQEWLDAVSSARIPCAVVSGLDR-------RKMVEALERM-GLLKYFQAIVSEEDGMESMAHRFLSAAVKL 270 (361)
Q Consensus 199 ~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~-------~~~~~~L~~l-gl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl 270 (361)
....+|.||+.+.|+.|.+.|+.+.++|..+. ......+++. |...+-+.+++. .|- .+
T Consensus 69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~-----~K~--------~v 135 (191)
T PF06941_consen 69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTG-----DKT--------LV 135 (191)
T ss_dssp TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEES-----SGG--------GC
T ss_pred hcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEec-----CCC--------eE
Confidence 34568999999999999999977777776432 2334445544 432222344443 231 12
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHh
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRR 329 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~ 329 (361)
+. + ++|+|++..+..+.+.|+.++.+..+++.... .-..+.+++|+..+++..
T Consensus 136 ~~--D--vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~--~~~Rv~~W~ei~~~i~~~ 188 (191)
T PF06941_consen 136 GG--D--VLIDDRPHNLEQFANAGIPVILFDQPYNRDES--NFPRVNNWEEIEDLILSS 188 (191)
T ss_dssp ----S--EEEESSSHHHSS-SSESSEEEEE--GGGTT----TSEEE-STTSHHHHHHHT
T ss_pred ec--c--EEecCChHHHHhccCCCceEEEEcCCCCCCCC--CCccCCCHHHHHHHHHhc
Confidence 21 2 89999999999999999999988544444333 568899999999887764
No 142
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.17 E-value=1.5e-05 Score=72.39 Aligned_cols=58 Identities=16% Similarity=0.076 Sum_probs=49.4
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhh
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNE 321 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~E 321 (361)
.+..+++.+|++++++++|||+.||+.|.+.+|.+.++ +++...-...|++++.+-.+
T Consensus 190 ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am--~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 190 AIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM--GNATPELKKAADYITPSNND 247 (254)
T ss_dssp HHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE--TTS-HHHHHHSSEEESSGTC
T ss_pred HHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE--cCCCHHHHHhCCEEecCCCC
Confidence 48999999999999999999999999999999999777 55555555679999888776
No 143
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=98.13 E-value=1.3e-05 Score=84.01 Aligned_cols=113 Identities=13% Similarity=0.146 Sum_probs=86.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
..+.|++.+.+++|++.|+++.++|+..+..++..-+.+|+++++.. -+|+--....+++.-.-..+.|||
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Ae---------llPedK~~~V~~l~~~g~~VamVG 606 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAE---------LLPEDKAEIVRELQAEGRKVAMVG 606 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhhecc---------CCcHHHHHHHHHHHhcCCEEEEEe
Confidence 36899999999999999999999999999999999999999665532 345544445555554447899999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhHHH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELSVI 325 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~~~ 325 (361)
|+.||..+...|-++.++ |.+..-..+-||.++- ++..+...
T Consensus 607 DGINDAPALA~AdVGiAm--G~GtDvA~eaADvvL~~~dL~~v~~a 650 (713)
T COG2217 607 DGINDAPALAAADVGIAM--GSGTDVAIEAADVVLMRDDLSAVPEA 650 (713)
T ss_pred CCchhHHHHhhcCeeEee--cCCcHHHHHhCCEEEecCCHHHHHHH
Confidence 999999999999987655 4444444456787654 46666543
No 144
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.11 E-value=3.2e-06 Score=77.14 Aligned_cols=43 Identities=5% Similarity=-0.086 Sum_probs=37.6
Q ss_pred CCCChHHHHHHHHHcCC--CCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 256 MESMAHRFLSAAVKLDR--KPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi--~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
...|+..+..+++.+++ .+++|++|||+.||+.|.+.+|++++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 45689999999888876 67799999999999999999999754
No 145
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.10 E-value=1.3e-05 Score=72.48 Aligned_cols=70 Identities=14% Similarity=0.169 Sum_probs=51.4
Q ss_pred eCCCHHHHHHHHHhCCCC----cccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 226 SGLDRRKMVEALERMGLL----KYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 226 Sn~~~~~~~~~L~~lgl~----~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
++.....+...++..++. .+|..+... ...|+..+..+++++|+++++|++|||+.||+.|.+.+|.+++
T Consensus 146 ~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~---~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 146 SDSRMPRFTALLADLGLAIVQGNRFSHVLGA---SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred chhHHHHHHHHHHHcCCeEEecCCeeEEecC---CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 344445555666665654 222222222 2358999999999999999999999999999999999998855
No 146
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.09 E-value=1.4e-05 Score=73.02 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=63.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC---CHHHHHHHHHhCCCCcccceeEecCCCC------CCChHHHHHHHHH-cCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL---DRRKMVEALERMGLLKYFQAIVSEEDGM------ESMAHRFLSAAVK-LDR 272 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~---~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------~~KP~~~~~~~~k-lgi 272 (361)
++.||+.++++.++++|+.|+++||. .+......|...|...+-..++-.+... ..|......+.++ +.+
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~I 194 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRI 194 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcE
Confidence 67999999999999999999999984 4566777788889765433344443321 2366666666666 444
Q ss_pred CCCcEEEEcCChHHHHHHHHc
Q 018088 273 KPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~a 293 (361)
++.|||..+|+..++..
T Consensus 195 ----i~~iGD~~~D~~~~~~~ 211 (229)
T PF03767_consen 195 ----IANIGDQLSDFSGAKTA 211 (229)
T ss_dssp ----EEEEESSGGGCHCTHHH
T ss_pred ----EEEeCCCHHHhhccccc
Confidence 78999999999885443
No 147
>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]
Probab=98.09 E-value=0.00026 Score=63.33 Aligned_cols=122 Identities=14% Similarity=0.113 Sum_probs=91.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
..++++...++.-+..|++++|.|.+.....+.+...- .+..|++..+....+.+..-..|.++.+.+|.++.+.++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~K~e~~sy~~I~~~Ig~s~~eiLf 202 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGLKVESQSYKKIGHLIGKSPREILF 202 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhccccceehhHHHHHHHHHhCCChhheEE
Confidence 67999999999999999999999999877776666554 344455555544333233356999999999999999999
Q ss_pred EcCChHHHHHHHHcCCeEEEEeCCCCcc---cccCcceEeCChhhhHH
Q 018088 280 FEDDPRAITAAHNCTMMAVGLIGAHRAY---DLVQADLAVANFNELSV 324 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~V~g~~~~~---~l~~ad~vi~sl~EL~~ 324 (361)
.-|-+....+|+.+|+.+..+..+++.. +..-.--++.+|..|..
T Consensus 203 LTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~~ 250 (254)
T KOG2630|consen 203 LTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILEN 250 (254)
T ss_pred eccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhhc
Confidence 9999999999999999988774433322 22223566777777653
No 148
>PRK10976 putative hydrolase; Provisional
Probab=98.01 E-value=7.9e-06 Score=76.10 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=52.0
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcc--eEeCChhh
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQAD--LAVANFNE 321 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad--~vi~sl~E 321 (361)
..|...+..+++.+|++++++++|||+.||++|.+.+|.+.++ ++........|+ +++.+.+|
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm--~NA~~~vK~~A~~~~v~~~n~e 253 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM--GNAHQRLKDLLPELEVIGSNAD 253 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee--cCCcHHHHHhCCCCeecccCch
Confidence 4589999999999999999999999999999999999998777 444555555565 67766554
No 149
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=97.99 E-value=2.2e-05 Score=67.73 Aligned_cols=92 Identities=14% Similarity=0.134 Sum_probs=65.2
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCC--------------HHHHHHHHHhCCCCcccceeEecCCCCCCCh--HHHHHHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLD--------------RRKMVEALERMGLLKYFQAIVSEEDGMESMA--HRFLSAA 267 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~--------------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP--~~~~~~~ 267 (361)
..|++.+.|++|.+.|+.++|+||.. ...+..+++.+++. +..+++......+|| -++..++
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~~ 107 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--IQVYAAPHKDPCRKPNPGMWEFAL 107 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---EEEEECGCSSTTSTTSSHHHHHHC
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--eEEEecCCCCCCCCCchhHHHHHH
Confidence 35689999999999999999999841 23355566667764 444555544456676 5889999
Q ss_pred HHcCC----CCCcEEEEcCC-----------hHHHHHHHHcCCeE
Q 018088 268 VKLDR----KPSKCVVFEDD-----------PRAITAAHNCTMMA 297 (361)
Q Consensus 268 ~klgi----~p~~~v~IGDs-----------~~Di~aA~~aG~~~ 297 (361)
+.++. +.++++||||. -.|..-|.|+|+..
T Consensus 108 ~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 108 KDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp CCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred HhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 88874 88999999996 57999999999874
No 150
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.97 E-value=4.8e-05 Score=82.40 Aligned_cols=120 Identities=12% Similarity=0.035 Sum_probs=86.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.. +.++++.+.. .-.|+--.
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~ 592 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKS 592 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHH
Confidence 679999999999999999999999999999999999999952 2344433211 12466444
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVIN 326 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~l 326 (361)
.+.+.+.-....|.|+||+.||..+.+.|.++.++ +.+..-....||+++ ++|..+...+
T Consensus 593 ~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm--g~gtdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 593 RIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV--DTAADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe--CCccHHHHHhCCEEEecCChHHHHHHH
Confidence 44554544446788999999999999999988665 333333345678776 4566665443
No 151
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.96 E-value=4.3e-05 Score=83.59 Aligned_cols=122 Identities=14% Similarity=0.079 Sum_probs=89.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|+++|+++.++|+.....+....+..|+..--..++++++.. .-.|+--.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~ 658 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQ 658 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHH
Confidence 679999999999999999999999999999999999999964323344443311 12466444
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeC--ChhhhHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVA--NFNELSVIN 326 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~--sl~EL~~~l 326 (361)
.+.+.+.-.-..|.|+||+.||..|.+.|.++.++ | .+.......||+++. +|..+...+
T Consensus 659 ~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm--g~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 659 LLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM--GISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred HHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec--CCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 44444444445799999999999999999988654 3 233334456888887 677766544
No 152
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.93 E-value=2.5e-05 Score=84.78 Aligned_cols=121 Identities=12% Similarity=0.054 Sum_probs=89.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+.. +.++++.+.. .-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~ 627 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKE 627 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHH
Confidence 679999999999999999999999999999999999999952 3445544321 12466445
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
.+.+.+.-...-|.|+||+.||..+.+.|.++.++ |.+..-....||+++ +++..+...+.
T Consensus 628 ~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm--g~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 628 RIVTLLKREGHVVGFMGDGINDAPALRAADIGISV--DGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred HHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe--CCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 55555554456788999999999999999988665 333333445688877 45666655443
No 153
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.93 E-value=5.4e-05 Score=83.45 Aligned_cols=122 Identities=10% Similarity=0.093 Sum_probs=88.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc----------cceeEecCCCC----------------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY----------FQAIVSEEDGM---------------- 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~----------Fd~iv~~e~~~---------------- 256 (361)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..- -+.++++.+..
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V 725 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLV 725 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeE
Confidence 7899999999999999999999999999999999999999532 12355554321
Q ss_pred --CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC-CCCcccccCcceEeCC--hhhhHHHH
Q 018088 257 --ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG-AHRAYDLVQADLAVAN--FNELSVIN 326 (361)
Q Consensus 257 --~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g-~~~~~~l~~ad~vi~s--l~EL~~~l 326 (361)
.-.|+--..+.+.+.-....|.|+||+.||..|.+.|.++.++ | .+.......||+++.+ |..+...+
T Consensus 726 ~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm--g~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 726 IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM--GINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred EEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec--CCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 1136544444555544456789999999999999999988664 2 2222333468888854 66665543
No 154
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.91 E-value=6e-05 Score=81.91 Aligned_cols=121 Identities=11% Similarity=0.031 Sum_probs=89.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC------------------CCChHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM------------------ESMAHRFL 264 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~------------------~~KP~~~~ 264 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.. +.++++.+.. .-.|+--.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~ 627 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKS 627 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHH
Confidence 679999999999999999999999999999999999999952 2344443321 11476555
Q ss_pred HHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhHHHHH
Q 018088 265 SAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELSVINL 327 (361)
Q Consensus 265 ~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~~~ll 327 (361)
.+.+.+.-.-.-|.|+||+.||..+.+.|-++.++ |.+..-....||+++ ++|..+...+.
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm--g~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISV--DSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe--CcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 55555554556789999999999999999988555 333433445688887 56777665443
No 155
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=97.87 E-value=6.9e-05 Score=74.82 Aligned_cols=101 Identities=11% Similarity=0.122 Sum_probs=71.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---------CCCcccceeEecCCC-----------------
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---------GLLKYFQAIVSEEDG----------------- 255 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---------gl~~~Fd~iv~~e~~----------------- 255 (361)
+...|.+..+|+.|+++|-++.++||+.-.++...++.+ ...++||.||+...-
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 345789999999999999999999999999999999985 246789998875210
Q ss_pred CC---C-------Ch-----HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHHHc-CCeEEEEeC
Q 018088 256 ME---S-------MA-----HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAHNC-TMMAVGLIG 302 (361)
Q Consensus 256 ~~---~-------KP-----~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~~a-G~~~v~V~g 302 (361)
+. . |. -......+.+|...++|++|||+.- |+..++.. |+.+++|..
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 00 0 01 1366777888999999999999987 98777776 999999853
No 156
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.83 E-value=3.4e-05 Score=82.44 Aligned_cols=116 Identities=14% Similarity=0.144 Sum_probs=83.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC-----------------------CC-CC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED-----------------------GM-ES 258 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~-----------------------~~-~~ 258 (361)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+.+. ++++++ +. .-
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~ 518 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAEV 518 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEec
Confidence 6799999999999999999999999999999999999999642 222111 11 12
Q ss_pred ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeC--ChhhhH
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVA--NFNELS 323 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~--sl~EL~ 323 (361)
.|+--..+.+.+.-....|.|+||+.||..+.+.|.++.++ +.+..-....||+++- ++..+.
T Consensus 519 ~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm--~~gtdvAkeaADivLl~d~l~~I~ 583 (755)
T TIGR01647 519 FPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV--AGATDAARSAADIVLTEPGLSVIV 583 (755)
T ss_pred CHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe--cCCcHHHHHhCCEEEEcCChHHHH
Confidence 46644555555555556799999999999999999988554 3333333345776653 444443
No 157
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=97.78 E-value=0.0004 Score=62.71 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=60.3
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHH----HHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRK----MVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~----~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
..+.||+.++++...++|..|..+||..... ...-|++.|+...-..-+---....+|...+..+.+-+ +-|
T Consensus 121 sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~~k~Ke~R~~~v~k~~----~iV 196 (274)
T COG2503 121 SKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKDKKSKEVRRQAVEKDY----KIV 196 (274)
T ss_pred cccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeCCCcHHHHHHHHhhcc----cee
Confidence 4789999999999999999999999987666 45556667776544322211133445666777776644 448
Q ss_pred EEEcCChHHHHHH
Q 018088 278 VVFEDDPRAITAA 290 (361)
Q Consensus 278 v~IGDs~~Di~aA 290 (361)
+.|||...|....
T Consensus 197 m~vGDNl~DF~d~ 209 (274)
T COG2503 197 MLVGDNLDDFGDN 209 (274)
T ss_pred eEecCchhhhcch
Confidence 9999999876443
No 158
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=97.75 E-value=0.002 Score=59.76 Aligned_cols=96 Identities=13% Similarity=0.221 Sum_probs=70.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH---HHhCCCCcc---c----------------------ceeEecCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA---LERMGLLKY---F----------------------QAIVSEED 254 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~---L~~lgl~~~---F----------------------d~iv~~e~ 254 (361)
..-+.+.++++.|++.|+++..+|........+. |+.+|++.- | ++|+.+
T Consensus 81 lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft-- 158 (252)
T PF11019_consen 81 LIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT-- 158 (252)
T ss_pred EcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe--
Confidence 4578899999999999999999998775555444 445576411 1 011111
Q ss_pred CCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHH----cCCeEEEE
Q 018088 255 GMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHN----CTMMAVGL 300 (361)
Q Consensus 255 ~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~----aG~~~v~V 300 (361)
.+..|...+...+.++|..|+++|||+|+...+....+ .|+..+|+
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~ 208 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGF 208 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEE
Confidence 11346789999999999999999999999988766554 57777776
No 159
>PLN02645 phosphoglycolate phosphatase
Probab=97.73 E-value=0.00033 Score=67.09 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=70.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
.++||+.++|+.|+++|++++++||.. .......++.+|+...++.|+++. ......+++.+....+.++
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-------~~~~~~l~~~~~~~~~~V~ 116 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-------FAAAAYLKSINFPKDKKVY 116 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH-------HHHHHHHHhhccCCCCEEE
Confidence 678999999999999999999999987 444455667889987777787762 2444455555655556688
Q ss_pred EcCChHHHHHHHHcCCeEEE
Q 018088 280 FEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 280 IGDs~~Di~aA~~aG~~~v~ 299 (361)
++++..+...++.+|+.++.
T Consensus 117 viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 117 VIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEcCHHHHHHHHHCCCEEec
Confidence 88888899999999998765
No 160
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.68 E-value=0.00016 Score=66.98 Aligned_cols=45 Identities=11% Similarity=0.008 Sum_probs=36.3
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g 302 (361)
.+|.+.+.++++++++++++++++|||.||+.|. ..+...|.|.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 4588999999999999999999999999999999 66667777643
No 161
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.65 E-value=0.00047 Score=59.32 Aligned_cols=94 Identities=5% Similarity=0.020 Sum_probs=60.2
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHH---HHHHhC---CCCcccceeEecCCC---------CCCCh-----HHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMV---EALERM---GLLKYFQAIVSEEDG---------MESMA-----HRF 263 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~---~~L~~l---gl~~~Fd~iv~~e~~---------~~~KP-----~~~ 263 (361)
..|++.++++.++++|++++++|+.+..... ..++.+ |..-....+++.... ...+| +.+
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~~~l 107 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKIACL 107 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHHHHH
Confidence 4689999999999999999999998877664 566652 211111344444321 12234 344
Q ss_pred HHHHHHcCCCCCc-EEEEcCChHHHHHHHHcCCeE
Q 018088 264 LSAAVKLDRKPSK-CVVFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 264 ~~~~~klgi~p~~-~v~IGDs~~Di~aA~~aG~~~ 297 (361)
..+.+.+.-.--. +..+||+.+|+++=+++|+..
T Consensus 108 ~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 108 RDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred HHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 4444443211223 346899999999999999963
No 162
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.65 E-value=0.00022 Score=78.46 Aligned_cols=123 Identities=15% Similarity=0.111 Sum_probs=86.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc------------------------ceeEecCCCC--
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF------------------------QAIVSEEDGM-- 256 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F------------------------d~iv~~e~~~-- 256 (361)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+..-- ..++++.+..
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 77999999999999999999999999999999999999884210 1344543321
Q ss_pred ------------------CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCC-CCcccccCcceEeC
Q 018088 257 ------------------ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGA-HRAYDLVQADLAVA 317 (361)
Q Consensus 257 ------------------~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~-~~~~~l~~ad~vi~ 317 (361)
...|+--..+.+.+.-...-|.|+||+.||+.|.+.|.++.++ |. +.......||+++.
T Consensus 648 ~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam--g~~G~~vak~aADivL~ 725 (997)
T TIGR01106 648 TSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM--GIAGSDVSKQAADMILL 725 (997)
T ss_pred CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec--CCcccHHHHHhhceEEe
Confidence 1135533334444443345688999999999999999988654 32 22223345788877
Q ss_pred C--hhhhHHHHH
Q 018088 318 N--FNELSVINL 327 (361)
Q Consensus 318 s--l~EL~~~ll 327 (361)
+ |.-+...+.
T Consensus 726 dd~f~~Iv~ai~ 737 (997)
T TIGR01106 726 DDNFASIVTGVE 737 (997)
T ss_pred cCCHHHHHHHHH
Confidence 6 776665433
No 163
>PLN03190 aminophospholipid translocase; Provisional
Probab=97.63 E-value=0.00012 Score=81.23 Aligned_cols=52 Identities=15% Similarity=0.271 Sum_probs=42.3
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
.-|++||||.||+.|.+.|.+++ ++.|..-.+....+|+.|..|..|..+++
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 45899999999999999998775 76665444444568999999999988776
No 164
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=97.63 E-value=0.00012 Score=62.86 Aligned_cols=80 Identities=19% Similarity=0.172 Sum_probs=64.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-ccc-ceeEecCCCCCCChHHHHHHH-HHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-KYF-QAIVSEEDGMESMAHRFLSAA-VKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~~F-d~iv~~e~~~~~KP~~~~~~~-~klgi~p~~~ 277 (361)
...++||+.++|+.|++. ++++|+|++.+.++...++.++.. .+| +.+++.+++... +.+-+ .-++.+.+.+
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~----~~KdL~~i~~~d~~~v 130 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP----HTKSLLRLFPADESMV 130 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC----ccccHHHHcCCCcccE
Confidence 347899999999999966 999999999999999999999988 488 677887765321 11123 3357788999
Q ss_pred EEEcCChH
Q 018088 278 VVFEDDPR 285 (361)
Q Consensus 278 v~IGDs~~ 285 (361)
|+|+|++.
T Consensus 131 vivDd~~~ 138 (156)
T TIGR02250 131 VIIDDRED 138 (156)
T ss_pred EEEeCCHH
Confidence 99999985
No 165
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.59 E-value=0.00027 Score=74.34 Aligned_cols=111 Identities=12% Similarity=0.127 Sum_probs=80.3
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.++.|++...++.|++.|++++++|+.+...++...++.|+ +.+++ +..+..|.+.++.+.+ ....+.|||
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi----~~V~a-ev~P~~K~~~Ik~lq~----~~~~VaMVG 792 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGI----DNVYA-EVLPEQKAEKIKEIQK----NGGPVAMVG 792 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCc----ceEEe-ccCchhhHHHHHHHHh----cCCcEEEEe
Confidence 36799999999999999999999999999999999999994 44444 3334445555544444 446799999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEe--CChhhhH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAV--ANFNELS 323 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi--~sl~EL~ 323 (361)
|+.||-.+...|.++.+. +.+..-..+.||+++ .++.++.
T Consensus 793 DGINDaPALA~AdVGIai--g~gs~vAieaADIVLmrn~L~~v~ 834 (951)
T KOG0207|consen 793 DGINDAPALAQADVGIAI--GAGSDVAIEAADIVLMRNDLRDVP 834 (951)
T ss_pred CCCCccHHHHhhccceee--ccccHHHHhhCCEEEEccchhhhH
Confidence 999999999888877544 222333334567654 3444444
No 166
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=97.58 E-value=0.00017 Score=79.89 Aligned_cols=123 Identities=13% Similarity=0.163 Sum_probs=83.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc-----------------------------------
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ----------------------------------- 247 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd----------------------------------- 247 (361)
++.||+.+.++.|+++|+++.++|+.....+.......|+...-.
T Consensus 631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 710 (1057)
T TIGR01652 631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLG 710 (1057)
T ss_pred hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhc
Confidence 789999999999999999999999998888888877776642111
Q ss_pred ------eeEecCCCC------------------------CCChHHHHHHHHHcCCC-CCcEEEEcCChHHHHHHHHcCCe
Q 018088 248 ------AIVSEEDGM------------------------ESMAHRFLSAAVKLDRK-PSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 248 ------~iv~~e~~~------------------------~~KP~~~~~~~~klgi~-p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
.+++++... .-.|+--..+.+.+.-. ...|.++|||.||+.|.+.|.++
T Consensus 711 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVG 790 (1057)
T TIGR01652 711 DSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVG 790 (1057)
T ss_pred cCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCee
Confidence 133332100 00132111122222211 45799999999999999999877
Q ss_pred EEEEeCCCCcccccCcceEeCChhhhHHHH
Q 018088 297 AVGLIGAHRAYDLVQADLAVANFNELSVIN 326 (361)
Q Consensus 297 ~v~V~g~~~~~~l~~ad~vi~sl~EL~~~l 326 (361)
. ++.|.........+|+++.+|..|..++
T Consensus 791 I-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 791 V-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred e-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 5 6655432233356999999998887765
No 167
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.55 E-value=0.0032 Score=58.49 Aligned_cols=96 Identities=8% Similarity=0.069 Sum_probs=59.2
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCH---HHHHHHHHhCCCCcccceeEecCCCC-CCCh------HHHHHHHHHc
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERMGLLKYFQAIVSEEDGM-ESMA------HRFLSAAVKL 270 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~---~~~~~~L~~lgl~~~Fd~iv~~e~~~-~~KP------~~~~~~~~kl 270 (361)
..++.|++.++.+.++++|++|.++||... ......|...|...+ +.++--.... ..+. +....+. +-
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li-~e 220 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLI-QE 220 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHH-Hc
Confidence 457899999999999999999999999764 345556667787644 4444433221 2222 2222222 22
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
|. .=+..|||..+|+......+..+.-+
T Consensus 221 GY--rIv~~iGDq~sDl~G~~~g~~RtFKL 248 (275)
T TIGR01680 221 GY--NIVGIIGDQWNDLKGEHRGAIRSFKL 248 (275)
T ss_pred Cc--eEEEEECCCHHhccCCCccCcceecC
Confidence 22 12578999999995544222455543
No 168
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.54 E-value=0.00031 Score=76.60 Aligned_cols=98 Identities=10% Similarity=0.080 Sum_probs=76.8
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCC------------------ChH
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMES------------------MAH 261 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~------------------KP~ 261 (361)
.+|.+++++.++.|+++|+++..+|+.....+...-+..|+..-- +.++++.+...- .|+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~ 625 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE 625 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence 488999999999999999999999999999999999999986544 336666542211 255
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
--..+.+.+.-.-.-|.|.|||.||+.|.+.|-++..+
T Consensus 626 qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam 663 (917)
T COG0474 626 QKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM 663 (917)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe
Confidence 44445555544456788999999999999999988655
No 169
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.53 E-value=0.00041 Score=64.00 Aligned_cols=68 Identities=9% Similarity=-0.100 Sum_probs=55.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc-------CCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC-------TMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a-------G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
..|...+..+++++++.++++++|||+.+|+.|++.+ |..++.|.. ......|++++++.+++..++.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~---g~~~~~A~~~~~~~~~v~~~L~ 240 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGS---GSKKTVAKFHLTGPQQVLEFLG 240 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEec---CCcCCCceEeCCCHHHHHHHHH
Confidence 3477899999999999999999999999999999999 666666641 1223468999999999877653
No 170
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.41 E-value=0.00053 Score=71.18 Aligned_cols=44 Identities=5% Similarity=-0.090 Sum_probs=40.0
Q ss_pred CCCChHHHHHHHHHcCCCCCcEEEE--cCChHHHHHHHHcCCeEEE
Q 018088 256 MESMAHRFLSAAVKLDRKPSKCVVF--EDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi~p~~~v~I--GDs~~Di~aA~~aG~~~v~ 299 (361)
...|...+..+++.+++..+++++| ||+.||+.|.+.||.++++
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM 656 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILV 656 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEE
Confidence 3568999999999999999999999 9999999999999998665
No 171
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=97.41 E-value=0.00048 Score=71.92 Aligned_cols=98 Identities=9% Similarity=0.101 Sum_probs=78.5
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc----eeEecCCCCCC------------------C
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ----AIVSEEDGMES------------------M 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd----~iv~~e~~~~~------------------K 259 (361)
.+|.|++++.++.|++.|+++..+|+.+...+....+++|+...-+ ..+++.+...- .
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~ 662 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAE 662 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecC
Confidence 3789999999999999999999999999999999999999765444 45555443221 2
Q ss_pred hHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 260 AHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
|.--.++.+.|+-.-+=|-|-||+.||..+.|.|-++.++
T Consensus 663 P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM 702 (972)
T KOG0202|consen 663 PQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM 702 (972)
T ss_pred chhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee
Confidence 4445666777766667788999999999999999988765
No 172
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=97.40 E-value=0.0076 Score=54.76 Aligned_cols=76 Identities=13% Similarity=0.031 Sum_probs=58.2
Q ss_pred EEEeCCCHHHHHHHHHh--CCCCccc--ceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 223 AVVSGLDRRKMVEALER--MGLLKYF--QAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 223 aivSn~~~~~~~~~L~~--lgl~~~F--d~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
++||++. .+..+.+. +||..+| +.|+++-. .+|..+|+++.+++|-+...-++|||+...-.+|+..+++.+
T Consensus 179 vLVTs~q--LVPaLaKcLLy~L~~~f~ieNIYSa~k--vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wPFw 254 (274)
T TIGR01658 179 VLVTSGQ--LIPSLAKCLLFRLDTIFRIENVYSSIK--VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWPFV 254 (274)
T ss_pred EEEEcCc--cHHHHHHHHHhccCCccccccccchhh--cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCCeE
Confidence 5666663 33333333 4676666 45666644 579999999999999988999999999999999999999988
Q ss_pred EEeC
Q 018088 299 GLIG 302 (361)
Q Consensus 299 ~V~g 302 (361)
-|..
T Consensus 255 ~I~~ 258 (274)
T TIGR01658 255 KIDL 258 (274)
T ss_pred Eeec
Confidence 7743
No 173
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=97.36 E-value=0.00053 Score=59.08 Aligned_cols=91 Identities=13% Similarity=0.128 Sum_probs=61.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHH---H-HHHhCCCCcccceeEecCCCCCCChHHH--HHHHHHcCCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMV---E-ALERMGLLKYFQAIVSEEDGMESMAHRF--LSAAVKLDRKPSK 276 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~---~-~L~~lgl~~~Fd~iv~~e~~~~~KP~~~--~~~~~klgi~p~~ 276 (361)
-|.+-+++++....++|-.++++|+..+-.++ . +.+.+.+....-.++.++- +||.-| -.++..-++
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk---~k~~qy~Kt~~i~~~~~---- 186 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK---PKPGQYTKTQWIQDKNI---- 186 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC---CCcccccccHHHHhcCc----
Confidence 45666788999999999999999986443332 2 2334566555555666543 344322 123444444
Q ss_pred EEEEcCChHHHHHHHHcCCeEEEE
Q 018088 277 CVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 277 ~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
-|+.|||-+|+.+|+.||+..|-+
T Consensus 187 ~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 187 RIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred eEEecCCchhhhHHHhcCccceeE
Confidence 589999999999999999998855
No 174
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=97.34 E-value=0.0066 Score=61.67 Aligned_cols=112 Identities=8% Similarity=0.018 Sum_probs=67.3
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCccc--------
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYF-------- 246 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~F-------- 246 (361)
.+....+++....++...+... .+.|.+.+.+ +++|. .+|+|.+++.+++...+. +|++...
T Consensus 88 ~G~~~~el~~~~r~~l~~f~~~-----~l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~ 158 (497)
T PLN02177 88 AGLKIRDIELVSRSVLPKFYAE-----DVHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGADKVLGTELEVSK 158 (497)
T ss_pred cCCCHHHHHHHHHHHHHHHHHH-----hcCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCCEEEecccEECc
Confidence 3556666655554443333322 2566666554 45664 499999999999999976 7885331
Q ss_pred ceeEecCCCCC---CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE
Q 018088 247 QAIVSEEDGME---SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 247 d~iv~~e~~~~---~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~ 297 (361)
++.+++.-.+. .-.+-...+.+.+|.+... ++.||+.+|..+...|+-..
T Consensus 159 ~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 159 SGRATGFMKKPGVLVGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred CCEEeeeecCCCCCccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccE
Confidence 33333332111 1011222233556654444 89999999999999999663
No 175
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=97.27 E-value=0.002 Score=51.07 Aligned_cols=86 Identities=17% Similarity=0.222 Sum_probs=57.8
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...++||+.++|+.|+++|.+++++||+. +......|+.+|+.--.+.++++ .......+++. ....++
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts-------~~~~~~~l~~~-~~~~~v 83 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITS-------GMAAAEYLKEH-KGGKKV 83 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEH-------HHHHHHHHHHH-TTSSEE
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEECh-------HHHHHHHHHhc-CCCCEE
Confidence 34689999999999999999999999975 35566667888987555667766 33344444432 335778
Q ss_pred EEEcCChHHHHHHHHcCC
Q 018088 278 VVFEDDPRAITAAHNCTM 295 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~ 295 (361)
.++|-. ...+.++.+|+
T Consensus 84 ~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 84 YVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEES-H-HHHHHHHHTTE
T ss_pred EEEcCH-HHHHHHHHcCC
Confidence 888865 45666676664
No 176
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=97.24 E-value=0.002 Score=65.71 Aligned_cols=97 Identities=12% Similarity=0.132 Sum_probs=74.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
++.|++.+.++.|++.|+++.++|+.....+...-+.+|+ + + .-.|+--..+.+++.-....+.|+||
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~----~~~p~~K~~~v~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A----RVTPEEKAALVEALQKKGRVVAMTGD 414 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e----ccCHHHHHHHHHHHHHCCCEEEEECC
Confidence 6799999999999999999999999999999999999986 1 1 23455333444444333367999999
Q ss_pred ChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCC
Q 018088 283 DPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVAN 318 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~s 318 (361)
+.||..+.+.|+++... + ....+|+++.+
T Consensus 415 g~nD~~al~~Advgia~--~-----a~~~adivl~~ 443 (499)
T TIGR01494 415 GVNDAPALKKADVGIAM--G-----AKAAADIVLLD 443 (499)
T ss_pred ChhhHHHHHhCCCcccc--c-----hHHhCCeEEec
Confidence 99999999999977433 2 23347888775
No 177
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=97.24 E-value=0.0012 Score=61.09 Aligned_cols=43 Identities=12% Similarity=0.073 Sum_probs=40.0
Q ss_pred CCChHHHHHHHHHcCCC--CCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 257 ESMAHRFLSAAVKLDRK--PSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~--p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
..|...+.++++.+|++ ++++++|||+.||+.|.+.+|.++++
T Consensus 175 ~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam 219 (256)
T TIGR01486 175 SDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV 219 (256)
T ss_pred CCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe
Confidence 45888999999999999 99999999999999999999999776
No 178
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.23 E-value=0.003 Score=59.38 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=32.9
Q ss_pred CCChHHHHHHHHHcCCC--CCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 257 ESMAHRFLSAAVKLDRK--PSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~--p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
..|......+.+.+... +-.+|.+|||+||+.|.+.+-..+|.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi 251 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVL 251 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEe
Confidence 35666666666666543 45899999999999999999988654
No 179
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=97.22 E-value=0.0029 Score=70.25 Aligned_cols=41 Identities=15% Similarity=0.226 Sum_probs=38.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999999999999984
No 180
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.14 E-value=0.017 Score=61.82 Aligned_cols=64 Identities=9% Similarity=0.008 Sum_probs=48.6
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCC--eEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM--MAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~--~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
..|...+..+++ ++.++.+++|||+.||+.|.+.++. .+|.| |. ....|++++++.+|+..++.
T Consensus 656 vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~v-G~----~~s~A~~~l~~~~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKV-GP----GESRARYRLPSQREVRELLR 721 (726)
T ss_pred CCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEE-CC----CCCcceEeCCCHHHHHHHHH
Confidence 357888888888 7888999999999999999999853 23443 32 12468899999999766543
No 181
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.10 E-value=0.00055 Score=60.98 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=39.2
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
..|+..+..+++++++++++|++|||+.||+.|++.+|++++
T Consensus 162 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 162 VDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 458999999999999999999999999999999999998865
No 182
>COG4996 Predicted phosphatase [General function prediction only]
Probab=97.06 E-value=0.003 Score=51.79 Aligned_cols=84 Identities=21% Similarity=0.184 Sum_probs=65.6
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHH------HHcCCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAA------VKLDRKPS 275 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~------~klgi~p~ 275 (361)
..++|.++++++.++..|+-+..+|=++...+..+|..+++..||+.++...- ..|--++.+++ ....+.|+
T Consensus 40 v~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePh--P~K~~ML~~llr~i~~er~~~ikP~ 117 (164)
T COG4996 40 VHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPH--PYKFLMLSQLLREINTERNQKIKPS 117 (164)
T ss_pred EEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCC--ChhHHHHHHHHHHHHHhhccccCcc
Confidence 47899999999999999999999999899999999999999999999887522 12322332222 23356899
Q ss_pred cEEEEcCChHHH
Q 018088 276 KCVVFEDDPRAI 287 (361)
Q Consensus 276 ~~v~IGDs~~Di 287 (361)
++++++|..--+
T Consensus 118 ~Ivy~DDR~iH~ 129 (164)
T COG4996 118 EIVYLDDRRIHF 129 (164)
T ss_pred eEEEEecccccH
Confidence 999999976433
No 183
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.06 E-value=0.0036 Score=56.15 Aligned_cols=120 Identities=16% Similarity=0.099 Sum_probs=78.3
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-c-------cccee-------------------EecC-
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-K-------YFQAI-------------------VSEE- 253 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~-------~Fd~i-------------------v~~e- 253 (361)
.++.||+.+.++.|... +.-.|+|.+-+.++.+....+|+- . -+|.+ +.++
T Consensus 82 a~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 82 AKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred cccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 47899999999999887 788888888888888888877661 0 01210 0111
Q ss_pred -------------------------CCCCC-ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCC-eEEEEeCCCCc
Q 018088 254 -------------------------DGMES-MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTM-MAVGLIGAHRA 306 (361)
Q Consensus 254 -------------------------~~~~~-KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~-~~v~V~g~~~~ 306 (361)
.++.+ |..+....++.-+++-+ +++||||..|+.|.+.+.- +.++|.-+++.
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 01111 33445555555555544 8999999999999998743 33555445566
Q ss_pred ccccCcceEeCChhhhH
Q 018088 307 YDLVQADLAVANFNELS 323 (361)
Q Consensus 307 ~~l~~ad~vi~sl~EL~ 323 (361)
+.+..||+.|-+.+-..
T Consensus 240 Yal~eAdVAvisp~~~a 256 (315)
T COG4030 240 YALKEADVAVISPTAMA 256 (315)
T ss_pred ccccccceEEeccchhh
Confidence 67777887766555443
No 184
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.96 E-value=0.022 Score=61.61 Aligned_cols=67 Identities=13% Similarity=0.016 Sum_probs=49.1
Q ss_pred CCChHHHHHHH---HHcCCCCCcEEEEcCChHHHHHHHHcCC-------------eEEEEeCCCCcccccCcceEeCChh
Q 018088 257 ESMAHRFLSAA---VKLDRKPSKCVVFEDDPRAITAAHNCTM-------------MAVGLIGAHRAYDLVQADLAVANFN 320 (361)
Q Consensus 257 ~~KP~~~~~~~---~klgi~p~~~v~IGDs~~Di~aA~~aG~-------------~~v~V~g~~~~~~l~~ad~vi~sl~ 320 (361)
..|...+..++ +.+|+.++.+++|||+.||..|.+.++- -+|-| |. ....|.+.+++.+
T Consensus 761 vnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~----~~S~A~y~L~d~~ 835 (854)
T PLN02205 761 VSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQ----KPSKAKYYLDDTA 835 (854)
T ss_pred CCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CC----CCccCeEecCCHH
Confidence 34777777765 4569999999999999999999998862 12222 22 1245789999999
Q ss_pred hhHHHHHH
Q 018088 321 ELSVINLR 328 (361)
Q Consensus 321 EL~~~ll~ 328 (361)
|+..++..
T Consensus 836 eV~~lL~~ 843 (854)
T PLN02205 836 EIVRLMQG 843 (854)
T ss_pred HHHHHHHH
Confidence 99876543
No 185
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=96.81 E-value=0.0029 Score=69.32 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=41.3
Q ss_pred CCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhhHhcCCCC
Q 018088 273 KPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFANKGST 337 (361)
Q Consensus 273 ~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l~~~~~~~ 337 (361)
.+..+++|||+.||+.|.+.|.++ |||.|..-.+....+|+.|.-+.=|..+ |+=.++|.
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVG-VGIsG~EGmQAvmsSD~AIaqFrfL~rL----LLVHGhW~ 852 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVG-VGISGQEGMQAVMSSDFAIAQFRFLERL----LLVHGHWS 852 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcC-eeeccchhhhhhhcccchHHHHHHHhhh----heeeccee
Confidence 346799999999999999998876 6665654444445578887776655443 44444443
No 186
>PLN02382 probable sucrose-phosphatase
Probab=96.75 E-value=0.0065 Score=60.50 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=38.6
Q ss_pred CCChHHHHHHHHHc---CCCCCcEEEEcCChHHHHHHHHcCCeEEEE
Q 018088 257 ESMAHRFLSAAVKL---DRKPSKCVVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 257 ~~KP~~~~~~~~kl---gi~p~~~v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
..|...+.++++++ |++++++++|||+.||++|.+.+|...|++
T Consensus 174 ~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam 220 (413)
T PLN02382 174 AGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV 220 (413)
T ss_pred CCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE
Confidence 45889999999999 999999999999999999999999533444
No 187
>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=96.74 E-value=0.028 Score=53.54 Aligned_cols=98 Identities=8% Similarity=0.065 Sum_probs=73.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCCC-----CCCh---------------
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDGM-----ESMA--------------- 260 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~~-----~~KP--------------- 260 (361)
-.|....+|+.|+++|-++.++||++..++..-+..+ ...++||.++.-.+-+ ..+|
T Consensus 241 r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdk 320 (510)
T KOG2470|consen 241 RNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDK 320 (510)
T ss_pred ccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhh
Confidence 4667889999999999999999999999988888776 3456788776542211 1111
Q ss_pred ------------HHHHHHHHHcCCCCCcEEEEcCChH-HHHHHH-HcCCeEEEEe
Q 018088 261 ------------HRFLSAAVKLDRKPSKCVVFEDDPR-AITAAH-NCTMMAVGLI 301 (361)
Q Consensus 261 ------------~~~~~~~~klgi~p~~~v~IGDs~~-Di~aA~-~aG~~~v~V~ 301 (361)
..+...++--|....+|++|||..- |+.... .+|+.+.++.
T Consensus 321 v~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII 375 (510)
T KOG2470|consen 321 VDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAII 375 (510)
T ss_pred hhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccch
Confidence 0245566666788889999999976 988877 8999887764
No 188
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=96.70 E-value=0.0073 Score=56.15 Aligned_cols=49 Identities=18% Similarity=0.319 Sum_probs=39.1
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHH---HHHHHHHhCCCCcccceeEec
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRR---KMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~---~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
+.||+.++|+.|+++|++++++||.... .....++.+|+.--.+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcH
Confidence 6889999999999999999999996544 477778888886444556665
No 189
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=96.68 E-value=0.013 Score=54.56 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=44.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
.|.+.+.|.+|++.|.-+++=|.|.++.+...++.++|.++||.++++.
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGG 192 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCC
Confidence 5666778889999999899999999999999999999999999999875
No 190
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=96.59 E-value=0.0042 Score=61.90 Aligned_cols=91 Identities=11% Similarity=0.100 Sum_probs=77.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
...||.+|-+.+|++-|++.+.+|+.++-.....-+..|++++.. +.||+--....++.+-.-.=+-|.||
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiA---------eatPEdK~~~I~~eQ~~grlVAMtGD 517 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIA---------EATPEDKLALIRQEQAEGRLVAMTGD 517 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhh---------cCChHHHHHHHHHHHhcCcEEEEcCC
Confidence 358999999999999999999999999999999999999987654 46888777777777777777889999
Q ss_pred ChHHHHHHHHcCCeEEEEeC
Q 018088 283 DPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 283 s~~Di~aA~~aG~~~v~V~g 302 (361)
+.||..+...|..+.++-.|
T Consensus 518 GTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 518 GTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred CCCcchhhhhcchhhhhccc
Confidence 99999999999877666433
No 191
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=96.58 E-value=0.011 Score=55.22 Aligned_cols=66 Identities=12% Similarity=-0.009 Sum_probs=53.0
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc----CCeEEEEeCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC----TMMAVGLIGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a----G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
..|...+.++++.+|+..+++++|||+.||+.|.+.+ |.. |.| |... ..|.+.+++..++..++-.
T Consensus 173 ~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~-vav-g~a~----~~A~~~l~~~~~v~~~L~~ 242 (266)
T PRK10187 173 TNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGIS-VKV-GTGA----TQASWRLAGVPDVWSWLEM 242 (266)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeE-EEE-CCCC----CcCeEeCCCHHHHHHHHHH
Confidence 3578899999999999999999999999999999988 544 444 3221 4488999999999876544
No 192
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.58 E-value=0.022 Score=53.52 Aligned_cols=89 Identities=15% Similarity=0.142 Sum_probs=62.9
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v 278 (361)
..++||+.++|+.|+++|++++++||+. +......++.+|+....+.++++ .......+++......+++
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts-------~~~~~~~l~~~~~~~~~v~ 89 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSS-------ALCAARLLRQPPDAPKAVY 89 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecH-------HHHHHHHHHhhCcCCCEEE
Confidence 3579999999999999999999999964 44555677888886544555554 2334444555444567899
Q ss_pred EEcCChHHHHHHHHcCCeEE
Q 018088 279 VFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 279 ~IGDs~~Di~aA~~aG~~~v 298 (361)
++|+.. ....++..|+..+
T Consensus 90 ~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 90 VIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred EEcCHH-HHHHHHHCCCEEe
Confidence 999853 3456677888754
No 193
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.30 E-value=0.043 Score=47.03 Aligned_cols=92 Identities=8% Similarity=0.051 Sum_probs=58.6
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCH---HHHHHHHHhC---CCCcccce-eEec---------CCCCCCChHHHHH--
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDR---RKMVEALERM---GLLKYFQA-IVSE---------EDGMESMAHRFLS-- 265 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~---~~~~~~L~~l---gl~~~Fd~-iv~~---------e~~~~~KP~~~~~-- 265 (361)
..+|+.++.+.++++||++..+|+.+. ...+..|+.. |. .+.++ ++.+ .++...+|+.|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~-~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~~~ 106 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGH-NLPDGPVLLSPDSLFSALHREVISKDPEEFKIAC 106 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCc-cCCCCCEEECCcchhhhhhccccccChHHHHHHH
Confidence 478999999999999999999999763 3344445544 21 22232 3333 1343456764433
Q ss_pred ---HHHHcCCCCC-cEEEEcCChHHHHHHHHcCCe
Q 018088 266 ---AAVKLDRKPS-KCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 266 ---~~~klgi~p~-~~v~IGDs~~Di~aA~~aG~~ 296 (361)
+...+.-... =...+|+..+|+.+=+++|+.
T Consensus 107 L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 107 LRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 3333321122 245799999999999999996
No 194
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=96.28 E-value=0.0031 Score=53.91 Aligned_cols=83 Identities=19% Similarity=0.277 Sum_probs=61.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCC-CcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGL-LKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl-~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..+.||+.++|+.+.+. +.++|.|.+...++..+++.+.- ..+|+.++..+.....+... .+-++++|.+++++|+|
T Consensus 35 v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~~-~KdL~~l~~~~~~vviv 112 (159)
T PF03031_consen 35 VKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGSY-IKDLSKLGRDLDNVVIV 112 (159)
T ss_dssp EEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTEE-E--GGGSSS-GGGEEEE
T ss_pred EeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccccccc-ccchHHHhhccccEEEE
Confidence 36799999999999777 99999999999999999999987 56889888877653222111 25667778889999999
Q ss_pred cCChHH
Q 018088 281 EDDPRA 286 (361)
Q Consensus 281 GDs~~D 286 (361)
+|++.-
T Consensus 113 DD~~~~ 118 (159)
T PF03031_consen 113 DDSPRK 118 (159)
T ss_dssp ES-GGG
T ss_pred eCCHHH
Confidence 999974
No 195
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=95.89 E-value=0.029 Score=49.89 Aligned_cols=91 Identities=12% Similarity=0.135 Sum_probs=58.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc--cc--eeEecC---------CCC-CCChHHHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY--FQ--AIVSEE---------DGM-ESMAHRFLSAAV 268 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~--Fd--~iv~~e---------~~~-~~KP~~~~~~~~ 268 (361)
...|++.++|+.+.+. +.++|-|.+...++..+++.+|+... +. .+.... ... .-|+ +..+-.
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l~~l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKd--L~~lw~ 121 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKMTELGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKP--LGVIWA 121 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHHHHhcccCCccceEEEEeccccceeeEeeccCcEEEee--cHHhhh
Confidence 3599999999999996 99999999999999999999876321 11 111111 110 1233 222223
Q ss_pred HcC--CCCCcEEEEcCChHHHHHHHHcCCe
Q 018088 269 KLD--RKPSKCVVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 269 klg--i~p~~~v~IGDs~~Di~aA~~aG~~ 296 (361)
+++ .+.+++|+|.|++.-..+==..|+.
T Consensus 122 ~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~ 151 (195)
T TIGR02245 122 LLPEFYSMKNTIMFDDLRRNFLMNPQNGLK 151 (195)
T ss_pred hcccCCCcccEEEEeCCHHHHhcCCCCccc
Confidence 554 3779999999999753332223443
No 196
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=95.67 E-value=0.028 Score=46.82 Aligned_cols=107 Identities=13% Similarity=0.097 Sum_probs=70.5
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCC------CHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGL------DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKP 274 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~------~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p 274 (361)
....+|++++.+++|-+. +.++|+|.. ...-.+++.+.+..-.+-..++|+.- |+ .
T Consensus 66 nL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgnK----------------ni-v 127 (180)
T COG4502 66 NLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGNK----------------NI-V 127 (180)
T ss_pred hcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecCC----------------Ce-E
Confidence 347899999999999988 999999975 23445566666666555556777632 11 0
Q ss_pred CcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 275 SKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
.-=++|+|++..++..+ |++ |.+...|...+ .-...+.++.|....+++.+
T Consensus 128 kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~ne--nRF~Rv~~W~e~eq~ll~~~ 178 (180)
T COG4502 128 KADILIDDNPLNLENFK--GNK-ILFDAHHNKNE--NRFVRVRDWYEAEQALLESL 178 (180)
T ss_pred EeeEEecCCchhhhhcc--Cce-EEEecccccCc--cceeeeccHHHHHHHHHHhh
Confidence 11368999998887665 444 44433443322 23467889999988777654
No 197
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=95.61 E-value=0.058 Score=53.65 Aligned_cols=84 Identities=19% Similarity=0.214 Sum_probs=67.3
Q ss_pred cHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCC------CCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 207 GLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDG------MESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 207 gv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~------~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
..+..+..|++.|+-++|+|-+....+..+...+. |-++..++. ..+|.+-++++++++|+..+..+++
T Consensus 259 ~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFi 333 (574)
T COG3882 259 TFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFI 333 (574)
T ss_pred HHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEe
Confidence 34567888999999999999988888888877653 233333321 2468899999999999999999999
Q ss_pred cCChHHHHHHHHcCC
Q 018088 281 EDDPRAITAAHNCTM 295 (361)
Q Consensus 281 GDs~~Di~aA~~aG~ 295 (361)
+|++...+-.++-+-
T Consensus 334 DD~p~ErE~vk~~~~ 348 (574)
T COG3882 334 DDNPAERELVKRELP 348 (574)
T ss_pred cCCHHHHHHHHhcCc
Confidence 999998888888775
No 198
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.31 E-value=0.036 Score=57.21 Aligned_cols=120 Identities=14% Similarity=0.162 Sum_probs=81.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh--CCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER--MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~--lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
-..++..-|..|+.++...-++++..-.......+. ..+......++++--.+..|+++.+.+-++-| .++..||
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~---krvc~IG 788 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTG---KRVCAIG 788 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhC---ceEEEEc
Confidence 356777888888888766666677554444333332 13333345677766666678888777777766 6789999
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
|+-||+.|...|.++ |++.|....+.-..||+.|.-|..+..+++
T Consensus 789 DGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLLl 833 (1051)
T KOG0210|consen 789 DGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLLL 833 (1051)
T ss_pred CCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHhh
Confidence 999999998887655 455455444444568998888887776654
No 199
>PRK10976 putative hydrolase; Provisional
Probab=95.30 E-value=0.043 Score=50.93 Aligned_cols=37 Identities=14% Similarity=0.237 Sum_probs=31.9
Q ss_pred HHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 209 QEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 209 ~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+.|++++++|++++++|+.....+...++.+++..+
T Consensus 25 ~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (266)
T PRK10976 25 KETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSY 61 (266)
T ss_pred HHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCe
Confidence 4667889999999999999999999999999988644
No 200
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.16 E-value=0.064 Score=52.93 Aligned_cols=97 Identities=12% Similarity=0.012 Sum_probs=79.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeC--CCHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSG--LDRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn--~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v 278 (361)
.|.....++.+.+.++|-+|+++|. .+...++..|...|.+..--.++.+.+....| .+.|..+++..+++|.+.+
T Consensus 99 ypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w~ 178 (635)
T COG5610 99 YPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKWI 178 (635)
T ss_pred eccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhheE
Confidence 3444566889999999999999998 46778888888888865544466666655555 5799999999999999999
Q ss_pred EEcCChH-HHHHHHHcCCeEEE
Q 018088 279 VFEDDPR-AITAAHNCTMMAVG 299 (361)
Q Consensus 279 ~IGDs~~-Di~aA~~aG~~~v~ 299 (361)
.+||... |..++++.|+.+..
T Consensus 179 H~GDN~~aD~l~pk~LgI~Tlf 200 (635)
T COG5610 179 HCGDNWVADYLKPKNLGISTLF 200 (635)
T ss_pred EecCchhhhhcCccccchhHHH
Confidence 9999876 99999999998764
No 201
>KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only]
Probab=95.16 E-value=0.43 Score=46.13 Aligned_cols=77 Identities=18% Similarity=0.107 Sum_probs=51.9
Q ss_pred EEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 222 CAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 222 vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
-++||+..-.-....+=..||...| ..|++.-. .+|-.+|+++.+++|. ...-|+|||+...-.+|++..|++.-
T Consensus 373 nVlvTttqLipalaKvLL~gLg~~fpiENIYSa~k--iGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~Pfwr 449 (468)
T KOG3107|consen 373 NVLVTTTQLIPALAKVLLYGLGSSFPIENIYSATK--IGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNMPFWR 449 (468)
T ss_pred EEEEeccchhHHHHHHHHHhcCCcccchhhhhhhh--ccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCCceEe
Confidence 4566665322222222223554333 55665533 4678899999999998 56678999999999999999998766
Q ss_pred Ee
Q 018088 300 LI 301 (361)
Q Consensus 300 V~ 301 (361)
+.
T Consensus 450 I~ 451 (468)
T KOG3107|consen 450 IS 451 (468)
T ss_pred ec
Confidence 53
No 202
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=94.99 E-value=0.23 Score=45.81 Aligned_cols=98 Identities=12% Similarity=0.141 Sum_probs=66.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeC---CCHHHHHHHHHhCCCCcccceeEecCCCC--------CCC------hHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSG---LDRRKMVEALERMGLLKYFQAIVSEEDGM--------ESM------AHRFLS 265 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn---~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~--------~~K------P~~~~~ 265 (361)
.+.|++.++|+.|+++|++++++|| .....+...++.+|+....+.++++.... ..+ .+.+..
T Consensus 17 ~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~~~~~~v~~lg~~~l~~ 96 (249)
T TIGR01457 17 ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDLKLEKTVYVIGEEGLKE 96 (249)
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhcCCCCEEEEEcChhHHH
Confidence 5688999999999999999999998 45777888889999987777788764211 111 235667
Q ss_pred HHHHcCCC----CCcEEEEcCCh----HHHHHHH---HcCCeEEEE
Q 018088 266 AAVKLDRK----PSKCVVFEDDP----RAITAAH---NCTMMAVGL 300 (361)
Q Consensus 266 ~~~klgi~----p~~~v~IGDs~----~Di~aA~---~aG~~~v~V 300 (361)
.++..|+. ..+.|++|... .++..|. +.|+..++.
T Consensus 97 ~l~~~g~~~~~~~~~~Vvvg~~~~~~y~~l~~a~~~l~~g~~~i~t 142 (249)
T TIGR01457 97 AIKEAGYVEDKEKPDYVVVGLDRQIDYEKFATATLAIRKGAHFIGT 142 (249)
T ss_pred HHHHcCCEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCeEEEE
Confidence 77777753 23567777532 2333222 347775553
No 203
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=93.89 E-value=0.23 Score=52.73 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=76.4
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc--eeEecCCCCCC------------------ChH
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ--AIVSEEDGMES------------------MAH 261 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd--~iv~~e~~~~~------------------KP~ 261 (361)
.+..||+.+.++.|+.+|+.+-.||+.+-..++.....-|+...=+ .++.+.+.-.- .|.
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~ 725 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSPN 725 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCCc
Confidence 3669999999999999999999999999888888888888754433 23333222111 131
Q ss_pred ---HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEE-EEeCCCCcccccCcceEeC--ChhhhH
Q 018088 262 ---RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAV-GLIGAHRAYDLVQADLAVA--NFNELS 323 (361)
Q Consensus 262 ---~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v-~V~g~~~~~~l~~ad~vi~--sl~EL~ 323 (361)
.+-+.+.+.| +=+.+-||+.||-.+.+.|-++.+ ++.|. ....+.+|+++- +|.-+.
T Consensus 726 DK~lLVk~L~~~g---~VVAVTGDGTNDaPALkeADVGlAMGIaGT--eVAKEaSDIIi~DDNFssIV 788 (1034)
T KOG0204|consen 726 DKHLLVKGLIKQG---EVVAVTGDGTNDAPALKEADVGLAMGIAGT--EVAKEASDIIILDDNFSSIV 788 (1034)
T ss_pred hHHHHHHHHHhcC---cEEEEecCCCCCchhhhhcccchhccccch--hhhhhhCCeEEEcCchHHHH
Confidence 2333333222 234577999999999999998865 44332 223345676653 454443
No 204
>PTZ00174 phosphomannomutase; Provisional
Probab=93.83 E-value=0.15 Score=46.98 Aligned_cols=28 Identities=7% Similarity=0.011 Sum_probs=21.9
Q ss_pred CCcEEEEcC----ChHHHHHHHHcCCeEEEEe
Q 018088 274 PSKCVVFED----DPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 274 p~~~v~IGD----s~~Di~aA~~aG~~~v~V~ 301 (361)
++++++||| +.||++|.+.++...++|.
T Consensus 200 ~~eviafGD~~~~~~NDieMl~~~~~~g~~v~ 231 (247)
T PTZ00174 200 FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK 231 (247)
T ss_pred hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC
Confidence 478888888 7888888888777666664
No 205
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=93.82 E-value=0.19 Score=43.16 Aligned_cols=115 Identities=11% Similarity=0.011 Sum_probs=71.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHH---HHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEA---LERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV 279 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~---L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~ 279 (361)
....++...|..++++ .+++.+|...+...... +..-.+ .+|.+.-.+- ..| ..+++.++++ ++
T Consensus 72 l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~~~l~~q~i--h~~~l~i~g~--h~K----V~~vrth~id----lf 138 (194)
T COG5663 72 LLAQLVKQVLPSLKEE-HRLIYITARKADLTRITYAWLFIQNI--HYDHLEIVGL--HHK----VEAVRTHNID----LF 138 (194)
T ss_pred HHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHHHHHHHhcc--chhhhhhhcc--ccc----chhhHhhccC----cc
Confidence 4466788888888887 68888887644443332 332222 3344322211 234 2355666664 78
Q ss_pred EcCChH-HHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhh
Q 018088 280 FEDDPR-AITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRL 330 (361)
Q Consensus 280 IGDs~~-Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l 330 (361)
++|+.. -++.|+++|++++.+..+.......++-..+.++.|...++-+++
T Consensus 139 ~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~ 190 (194)
T COG5663 139 FEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRL 190 (194)
T ss_pred ccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHh
Confidence 999864 688889999999998665555544445555667777776655443
No 206
>PRK10444 UMP phosphatase; Provisional
Probab=93.69 E-value=0.63 Score=43.02 Aligned_cols=83 Identities=8% Similarity=0.129 Sum_probs=53.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHH---HHHHHHhCCCCcccceeEecCCC--------CCCC-----hHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRK---MVEALERMGLLKYFQAIVSEEDG--------MESM-----AHRFLSA 266 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~---~~~~L~~lgl~~~Fd~iv~~e~~--------~~~K-----P~~~~~~ 266 (361)
.+.||+.++++.|+++|.+++++||..... ....|+.+|+.---+.++++... ...+ ...+...
T Consensus 17 ~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~~~~~v~~~g~~~l~~~ 96 (248)
T PRK10444 17 VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVIGEGALIHE 96 (248)
T ss_pred eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhCCCCEEEEEcCHHHHHH
Confidence 679999999999999999999999976544 45556667875444566665211 0111 1234455
Q ss_pred HHHcCCC----CCcEEEEcCChH
Q 018088 267 AVKLDRK----PSKCVVFEDDPR 285 (361)
Q Consensus 267 ~~klgi~----p~~~v~IGDs~~ 285 (361)
++..|+. ..++|++|...+
T Consensus 97 l~~~g~~~~~~~~~~Vvvg~~~~ 119 (248)
T PRK10444 97 LYKAGFTITDINPDFVIVGETRS 119 (248)
T ss_pred HHHCcCEecCCCCCEEEEeCCCC
Confidence 5555543 235777776554
No 207
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.41 E-value=0.84 Score=38.75 Aligned_cols=90 Identities=12% Similarity=-0.009 Sum_probs=55.5
Q ss_pred CCccHHHHHHHHhhC-C-CcEEEEeCCC--------HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHc-C-
Q 018088 204 PMEGLQEWLDAVSSA-R-IPCAVVSGLD--------RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKL-D- 271 (361)
Q Consensus 204 ~~pgv~elL~~L~~~-G-i~vaivSn~~--------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~kl-g- 271 (361)
+.|....-+++++.. | ..++++||+. ...+..+-+..|+-- +--+ ..||.+-.+..+.+ |
T Consensus 62 Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV----lRHs----~kKP~ct~E~~~y~~~N 133 (190)
T KOG2961|consen 62 IWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV----LRHS----VKKPACTAEEVEYHFGN 133 (190)
T ss_pred cCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce----Eeec----ccCCCccHHHHHHHhCC
Confidence 445555555555542 3 5688999842 122333333345521 1111 24676555554443 3
Q ss_pred ---CCCCcEEEEcCChH-HHHHHHHcCCeEEEEe
Q 018088 272 ---RKPSKCVVFEDDPR-AITAAHNCTMMAVGLI 301 (361)
Q Consensus 272 ---i~p~~~v~IGDs~~-Di~aA~~aG~~~v~V~ 301 (361)
..+++++||||..- ||.+|...|...||+.
T Consensus 134 shv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~ 167 (190)
T KOG2961|consen 134 SHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTE 167 (190)
T ss_pred cccCChhHeEEEccchhhhHhhhhhccceeEEec
Confidence 57999999999986 9999999999999974
No 208
>PTZ00174 phosphomannomutase; Provisional
Probab=92.96 E-value=0.093 Score=48.35 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=22.2
Q ss_pred CCceEEEEece-eccccHHHHHHHHHHHH---HHhCCCC
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNAWKQLA---FEEGKEI 151 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a~~~~l---~~~G~~~ 151 (361)
+++|+|+||+| ||+++...+.+...+++ .+.|+.+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~ 41 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKI 41 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEE
Confidence 45899999999 99987653333333333 3345543
No 209
>PLN02580 trehalose-phosphatase
Probab=92.64 E-value=0.45 Score=46.80 Aligned_cols=69 Identities=9% Similarity=-0.139 Sum_probs=50.8
Q ss_pred CCCChHHHHHHHHHcCCCCCc---EEEEcCChHHHHHHHHc-----CCeEEEEeCCCCcccccCcceEeCChhhhHHHHH
Q 018088 256 MESMAHRFLSAAVKLDRKPSK---CVVFEDDPRAITAAHNC-----TMMAVGLIGAHRAYDLVQADLAVANFNELSVINL 327 (361)
Q Consensus 256 ~~~KP~~~~~~~~klgi~p~~---~v~IGDs~~Di~aA~~a-----G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll 327 (361)
...|...+..+++.+|+...+ .++|||+.+|..|.+.+ |+. |.|. .. .....|.+.+++..|+..++.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~-I~Vg-n~--~~~t~A~y~L~dp~eV~~~L~ 374 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYG-ILVS-SV--PKESNAFYSLRDPSEVMEFLK 374 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceE-EEEe-cC--CCCccceEEcCCHHHHHHHHH
Confidence 345788999999999998764 38999999999999963 544 3332 21 123468999999999987653
Q ss_pred H
Q 018088 328 R 328 (361)
Q Consensus 328 ~ 328 (361)
.
T Consensus 375 ~ 375 (384)
T PLN02580 375 S 375 (384)
T ss_pred H
Confidence 3
No 210
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.25 E-value=1.5 Score=39.98 Aligned_cols=86 Identities=13% Similarity=0.111 Sum_probs=53.5
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHh-CCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALER-MGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~-lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
..++|++.++|+.++++|+++.++||+. .......|.. +|+.--.+.++++. ......+++.+ ..+.+
T Consensus 13 ~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~-------~~~~~~l~~~~-~~~~v 84 (236)
T TIGR01460 13 HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSG-------SVTKDLLRQRF-EGEKV 84 (236)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHH-------HHHHHHHHHhC-CCCEE
Confidence 3679999999999999999999999754 4444455555 67765566666652 22222222211 22457
Q ss_pred EEEcCChHHHHHHHHcCCe
Q 018088 278 VVFEDDPRAITAAHNCTMM 296 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~ 296 (361)
+++|.. ...+.++..|+.
T Consensus 85 ~v~G~~-~~~~~l~~~g~~ 102 (236)
T TIGR01460 85 YVIGVG-ELRESLEGLGFR 102 (236)
T ss_pred EEECCH-HHHHHHHHcCCc
Confidence 777753 334555666653
No 211
>PLN02423 phosphomannomutase
Probab=91.72 E-value=0.16 Score=46.89 Aligned_cols=41 Identities=5% Similarity=-0.112 Sum_probs=34.8
Q ss_pred CCChHHHHHHHHHcCCCCCcEEEEcC----ChHHHHHHHHcCCeEEEEeC
Q 018088 257 ESMAHRFLSAAVKLDRKPSKCVVFED----DPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~~~v~IGD----s~~Di~aA~~aG~~~v~V~g 302 (361)
..|...+..++ ++++|++||| +.||++|.+.-|+.++.|.+
T Consensus 188 vnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 188 WDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 34777777777 8999999999 79999999998988888754
No 212
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=91.66 E-value=0.58 Score=49.73 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=64.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc----c--------------------ceeEecCCCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY----F--------------------QAIVSEEDGMES 258 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~----F--------------------d~iv~~e~~~~~ 258 (361)
+|.+.+.+.+..++.+|+++..||+.....+++..+..|+..- + ..++.+.+...-
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~ 669 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDM 669 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEeccccccc
Confidence 5678888999999999999999999887777777777664210 0 123444443322
Q ss_pred ChHHHHHHHHHcC------CCC--------------CcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 259 MAHRFLSAAVKLD------RKP--------------SKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 259 KP~~~~~~~~klg------i~p--------------~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
.++-+..++.... -+| +=|-+.||+.||-.+.+.|-+++++
T Consensus 670 ~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM 730 (1019)
T KOG0203|consen 670 SSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM 730 (1019)
T ss_pred CHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee
Confidence 3333333333322 122 2255789999999999999998776
No 213
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.41 E-value=1.9 Score=39.71 Aligned_cols=91 Identities=16% Similarity=0.182 Sum_probs=63.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec----CCCC----CCCh--H-------HHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE----EDGM----ESMA--H-------RFLS 265 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~----e~~~----~~KP--~-------~~~~ 265 (361)
.+..|+.+++..|+++++++.+.|.+.-..++.++.+......+..+++. ++++ ..+| + .+..
T Consensus 138 ~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~~v~~~ 217 (298)
T KOG3128|consen 138 ALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNSSVLQN 217 (298)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHHHHccchHHHHh
Confidence 56889999999999999999999999888888888876544433333322 1111 1222 1 3444
Q ss_pred HHHHcCC--CCCcEEEEcCChHHHHHHHHc
Q 018088 266 AAVKLDR--KPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 266 ~~~klgi--~p~~~v~IGDs~~Di~aA~~a 293 (361)
..+.++. ....+++.||+.-|+.||.-+
T Consensus 218 ~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 218 ESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred hhHHHhhccCCceEEEeccccccchhhcCC
Confidence 4555543 346799999999999998765
No 214
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=91.28 E-value=2.9 Score=42.39 Aligned_cols=109 Identities=11% Similarity=0.030 Sum_probs=60.0
Q ss_pred cCCChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh-CCCCcccc-------
Q 018088 176 WGKEESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER-MGLLKYFQ------- 247 (361)
Q Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~-lgl~~~Fd------- 247 (361)
.+...++++.....+...+... .+.+. .++..+..| +++|+|..++.+++..++. +|.+...-
T Consensus 74 ~Gl~~~die~vaRavlpkf~~~-----dv~~e---~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~D~VvGTEL~v~~ 144 (498)
T PLN02499 74 AGVHESEIESVARAVLPKFYMD-----DVDME---AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRADEVIGSELVVNR 144 (498)
T ss_pred CCCCHHHHHHHHHHHhhHHHHh-----hCCHH---HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCCceEEeeeEEEee
Confidence 3455555655554443332222 12333 445566677 9999999999999999998 78743210
Q ss_pred -eeEecCCCCCCChHH-HHHHHHHcCCCCCcEEEEcCChHHHHHHHHcC
Q 018088 248 -AIVSEEDGMESMAHR-FLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT 294 (361)
Q Consensus 248 -~iv~~e~~~~~KP~~-~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG 294 (361)
..+++--.+....+. ...+.+.+| .....+-+||+..|-.-..-+.
T Consensus 145 ~G~~TG~~~G~n~~ek~~~rl~~~~g-~~~~~vg~~~~~~~~~f~~~ck 192 (498)
T PLN02499 145 FGFATGFIRGTDVDQSVANRVANLFV-DERPQLGLGRISASSSFLSLCK 192 (498)
T ss_pred ccEEEEEEecCccHHHHHHHHHHHhC-ccCceecccCCcccchhhhhCc
Confidence 122221111112332 333444455 2345788888876655555544
No 215
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=89.06 E-value=0.72 Score=42.46 Aligned_cols=92 Identities=16% Similarity=0.214 Sum_probs=54.9
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec----CCCC------------CCChH-HH
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE----EDGM------------ESMAH-RF 263 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~----e~~~------------~~KP~-~~ 263 (361)
...+.+|+.++++.|.++++|+.|.|.|--..+..+|++.|...---.|++. ++.+ ..|-+ .+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 3578999999999999999999999999999999999998653221122222 1110 11211 11
Q ss_pred HH--HHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 264 LS--AAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 264 ~~--~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
.. ..+++ -...+++..||+..|+.||.-+
T Consensus 168 ~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 168 EDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp TTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred cCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 10 01111 1346799999999999999877
No 216
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=88.85 E-value=3.3 Score=39.11 Aligned_cols=93 Identities=16% Similarity=0.127 Sum_probs=57.7
Q ss_pred CCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHH---hCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcE
Q 018088 201 VTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE---RMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~---~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~ 277 (361)
...+.||+.++++.|+..|-.+.++||++...-+..++ .+|+.. +..++...+- ......+++..-..+.+
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~~i~ssa-~~~a~ylk~~~~~~k~V 109 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEENIFSSA-YAIADYLKKRKPFGKKV 109 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCcccccChH-HHHHHHHHHhCcCCCeE
Confidence 44789999999999999999999999987666555554 456643 2222222221 11112222222445778
Q ss_pred EEEcCChHHHHHHHHcCCeEEEE
Q 018088 278 VVFEDDPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 278 v~IGDs~~Di~aA~~aG~~~v~V 300 (361)
.++|-..- -+-++++|+..++.
T Consensus 110 yvig~~gi-~~eL~~aG~~~~g~ 131 (306)
T KOG2882|consen 110 YVIGEEGI-REELDEAGFEYFGG 131 (306)
T ss_pred EEecchhh-hHHHHHcCceeecC
Confidence 88885432 35677788766653
No 217
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=88.35 E-value=0.49 Score=50.17 Aligned_cols=42 Identities=5% Similarity=0.143 Sum_probs=36.2
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
+++.|++++.++.|.+.+++++.+|+.+.-.+..+-+.+|+.
T Consensus 674 CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv 715 (1160)
T KOG0209|consen 674 CPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV 715 (1160)
T ss_pred CCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence 467999999999999999999999998877777777776653
No 218
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=87.48 E-value=1.1 Score=41.78 Aligned_cols=43 Identities=19% Similarity=0.202 Sum_probs=37.9
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF 246 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F 246 (361)
..+.+.++|+.|++.|++++++||.+...+...++.+|+..++
T Consensus 22 ~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~ 64 (273)
T PRK00192 22 SYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPF 64 (273)
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCE
Confidence 3466788999999999999999999999999999999987654
No 219
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=85.99 E-value=3.3 Score=39.75 Aligned_cols=87 Identities=14% Similarity=0.192 Sum_probs=58.5
Q ss_pred CCCCccHHHHHHHHhhC----CCcEEEEeCCC---HHHHHH-HHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 202 TEPMEGLQEWLDAVSSA----RIPCAVVSGLD---RRKMVE-ALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~----Gi~vaivSn~~---~~~~~~-~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
..+.||+.++++.|+.+ |+++.++||+. ...... +.+.+|+.--.+.++++. ......+++++
T Consensus 15 ~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~-------~~~~~ll~~~~-- 85 (321)
T TIGR01456 15 KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH-------SPYKSLVNKYE-- 85 (321)
T ss_pred ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh-------HHHHHHHHHcC--
Confidence 36799999999999998 99999999975 444344 447888753333444331 12333444442
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEE
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
..++++|.+. -...++.+|+..+.
T Consensus 86 -~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 86 -KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred -CceEEEeChH-HHHHHHHcCCcccc
Confidence 3688999764 46777789987653
No 220
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=85.71 E-value=2.3 Score=39.29 Aligned_cols=42 Identities=7% Similarity=0.112 Sum_probs=37.2
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+.+...+.|++|+++|++++++|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (270)
T PRK10513 20 TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQ 61 (270)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCC
Confidence 456678899999999999999999999999999999998864
No 221
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=85.29 E-value=1.7 Score=38.97 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=35.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
.+..+++|+.|+++|++++++||.+...+...++.+++.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 444789999999999999999999999999999999986
No 222
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=85.20 E-value=1.7 Score=39.38 Aligned_cols=42 Identities=19% Similarity=0.141 Sum_probs=37.5
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
..+...+.|++|+++|++++++|+.....+...++.+|+..+
T Consensus 16 ~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~ 57 (225)
T TIGR02461 16 EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP 57 (225)
T ss_pred CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 456789999999999999999999999999999999998653
No 223
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=83.83 E-value=3.9 Score=33.64 Aligned_cols=83 Identities=13% Similarity=0.035 Sum_probs=58.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCC-CHHHHHHHHHhCCCCcccce-----eEecCCC-CCCChHHHHHHHHHcCCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGL-DRRKMVEALERMGLLKYFQA-----IVSEEDG-MESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~-~~~~~~~~L~~lgl~~~Fd~-----iv~~e~~-~~~KP~~~~~~~~klgi~p~ 275 (361)
..+++++..|..|++.|+.++++|++ ....+.+.|+.+.+..-+-. .++...+ ...|-..|...-...|+.-.
T Consensus 44 ~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k 123 (144)
T KOG4549|consen 44 IFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQTGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEK 123 (144)
T ss_pred eeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcccccchhhhcCceeeecCcccchhHHHHhhccCcchh
Confidence 56999999999999999999999986 45677888887755332211 1111122 13465667777777788888
Q ss_pred cEEEEcCChH
Q 018088 276 KCVVFEDDPR 285 (361)
Q Consensus 276 ~~v~IGDs~~ 285 (361)
+..++.|-..
T Consensus 124 ~~~~fdDesr 133 (144)
T KOG4549|consen 124 NKQVFDDESR 133 (144)
T ss_pred ceeeeccccc
Confidence 8888888544
No 224
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=82.61 E-value=2.1 Score=38.15 Aligned_cols=42 Identities=17% Similarity=0.048 Sum_probs=36.9
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
+.|...+.|++|++.|++++++|+.+...+...++.+++..+
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~ 60 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP 60 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc
Confidence 466778899999999999999999999999999999988644
No 225
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=82.60 E-value=5.6 Score=35.74 Aligned_cols=41 Identities=22% Similarity=0.389 Sum_probs=33.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC---HHHHHHHHHhCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD---RRKMVEALERMGLL 243 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~---~~~~~~~L~~lgl~ 243 (361)
...||+.+.|+.|+..+.++-++||.. +..+...|.++|++
T Consensus 23 ~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 23 AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 469999999999999999999999965 44555666667764
No 226
>KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]
Probab=81.84 E-value=4.2 Score=39.92 Aligned_cols=95 Identities=8% Similarity=-0.002 Sum_probs=70.1
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC---CCCcccceeEecCCC---------------CCC--------Ch-
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERM---GLLKYFQAIVSEEDG---------------MES--------MA- 260 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l---gl~~~Fd~iv~~e~~---------------~~~--------KP- 260 (361)
...+|..+++.|-++.++||+...+....+..+ +...+||.++....- ..+ +|
T Consensus 203 ~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~ 282 (424)
T KOG2469|consen 203 IVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPL 282 (424)
T ss_pred cccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcc
Confidence 444999999999999999999888888887764 567788877765210 011 12
Q ss_pred --------HHHHHHHHHcCCCCCcEEEEcCChH-HH-HHHHHcCCeEEEEeC
Q 018088 261 --------HRFLSAAVKLDRKPSKCVVFEDDPR-AI-TAAHNCTMMAVGLIG 302 (361)
Q Consensus 261 --------~~~~~~~~klgi~p~~~v~IGDs~~-Di-~aA~~aG~~~v~V~g 302 (361)
.....+++.++....+++++||... |+ ..-+.-|..++.|..
T Consensus 283 e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 283 EQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred hhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 2567788888888899999999987 64 444566888887643
No 227
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=81.80 E-value=2.9 Score=37.48 Aligned_cols=43 Identities=14% Similarity=-0.024 Sum_probs=37.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+.|...+.|++|+++|++++++|+.+...+...++.+++..+
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 62 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGP 62 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc
Confidence 3567788999999999999999999999999998999988654
No 228
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=80.78 E-value=3.7 Score=37.64 Aligned_cols=42 Identities=17% Similarity=0.220 Sum_probs=37.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+.+...+.|++|+++|++++++|+.....+...++.+++..
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDT 57 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 467888999999999999999999999999999999998864
No 229
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=80.48 E-value=5.1 Score=41.65 Aligned_cols=122 Identities=11% Similarity=0.074 Sum_probs=75.3
Q ss_pred ceEEEEece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHHHHHh
Q 018088 119 AYGLIFSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQLYYDN 197 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~~~~~ 197 (361)
-+.||-|+| ||..+. +|-.++...|.+++
T Consensus 530 ~kIVISDIDGTITKSD-----vLGh~lp~iGkDWT--------------------------------------------- 559 (738)
T KOG2116|consen 530 DKIVISDIDGTITKSD-----VLGHVLPMIGKDWT--------------------------------------------- 559 (738)
T ss_pred CcEEEecCCCceEhhh-----hhhhhhhhhcCcch---------------------------------------------
Confidence 478999999 998777 77666666664431
Q ss_pred cccCCCCCccHHHHHHHHhhCCCcEEEEeCC---CHHHHHHHHHhCCCC--cccce--eEecC--------CCCCCChHH
Q 018088 198 LLSVTEPMEGLQEWLDAVSSARIPCAVVSGL---DRRKMVEALERMGLL--KYFQA--IVSEE--------DGMESMAHR 262 (361)
Q Consensus 198 l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~---~~~~~~~~L~~lgl~--~~Fd~--iv~~e--------~~~~~KP~~ 262 (361)
.-|+..+..+++++||++..+|.. .....+..|..+.-+ .+-|+ +++.+ ++..+||+-
T Consensus 560 -------h~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~ 632 (738)
T KOG2116|consen 560 -------HTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEV 632 (738)
T ss_pred -------hhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchh
Confidence 235667777788999999999873 334444444443211 12232 22222 334568875
Q ss_pred HHHH-----HHHcCCCCCc-EEEEcCChHHHHHHHHcCCeE
Q 018088 263 FLSA-----AVKLDRKPSK-CVVFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 263 ~~~~-----~~klgi~p~~-~v~IGDs~~Di~aA~~aG~~~ 297 (361)
|.-+ ..-+.-..+- ...||...+|+..=+..|+..
T Consensus 633 FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~ 673 (738)
T KOG2116|consen 633 FKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPL 673 (738)
T ss_pred hhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCc
Confidence 5443 3333311222 457899999999999999974
No 230
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=80.15 E-value=3.2 Score=39.33 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=37.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCccc
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYF 246 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~F 246 (361)
.+-+.+.|++|+++|++++++|+.....+..+++.+++..+|
T Consensus 20 ~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~ 61 (302)
T PRK12702 20 YGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPF 61 (302)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeE
Confidence 455778899999999999999999999999999999987654
No 231
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=79.94 E-value=3.6 Score=37.86 Aligned_cols=41 Identities=15% Similarity=0.132 Sum_probs=36.1
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+...+.|+.|+++|++++++|+.....+...++.+|+..+
T Consensus 18 ~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~ 58 (256)
T TIGR01486 18 WGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDP 58 (256)
T ss_pred chHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCc
Confidence 44578999999999999999999999999999999998543
No 232
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=79.55 E-value=3.9 Score=37.87 Aligned_cols=43 Identities=19% Similarity=0.135 Sum_probs=38.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+.+..++.|++|+++|++++++|+.+...+...++.+++..+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 61 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAY 61 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 4677788999999999999999999999999999999998654
No 233
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=79.49 E-value=19 Score=29.83 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=51.0
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHH-HHHHHHH----hCCCCcccceeEecCCCC--------CCChHHHHHHHHHcC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRR-KMVEALE----RMGLLKYFQAIVSEEDGM--------ESMAHRFLSAAVKLD 271 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~-~~~~~L~----~lgl~~~Fd~iv~~e~~~--------~~KP~~~~~~~~klg 271 (361)
...+.+++.+...+|-++.++-|+... ....... ..++.......+...... ...+.....+...++
T Consensus 21 i~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (138)
T PF13580_consen 21 IEKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYD 100 (138)
T ss_dssp HHHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcC
Confidence 445556666666777788888766322 2222222 234444443333332211 112334566777788
Q ss_pred CCCCcEEEE----cCChHH---HHHHHHcCCeEEEEeC
Q 018088 272 RKPSKCVVF----EDDPRA---ITAAHNCTMMAVGLIG 302 (361)
Q Consensus 272 i~p~~~v~I----GDs~~D---i~aA~~aG~~~v~V~g 302 (361)
+.|.+++++ |.+++= +..|++.|+.+|++++
T Consensus 101 ~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalTg 138 (138)
T PF13580_consen 101 IRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALTG 138 (138)
T ss_dssp --TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEEE
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 999998877 566764 5556677999998853
No 234
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=79.02 E-value=3.5 Score=43.09 Aligned_cols=57 Identities=18% Similarity=0.152 Sum_probs=48.1
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC-ccc-ceeEecCCCCCCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL-KYF-QAIVSEEDGMESM 259 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~-~~F-d~iv~~e~~~~~K 259 (361)
+++.|++.++|+++.+. +.+.|.|-+.+.++..+++-+.-. .|| |.|++.++.+..|
T Consensus 200 vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~~liDP~~~lF~dRIisrde~~~~k 258 (635)
T KOG0323|consen 200 VKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIAKLIDPEGKYFGDRIISRDESPFFK 258 (635)
T ss_pred EEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHHHHhCCCCccccceEEEecCCCccc
Confidence 47899999999999987 999999999999999999988543 355 7799988855555
No 235
>PLN02423 phosphomannomutase
Probab=78.56 E-value=1.2 Score=40.91 Aligned_cols=20 Identities=15% Similarity=0.149 Sum_probs=14.0
Q ss_pred CCceEEE-Eece-eccccHHHH
Q 018088 117 DEAYGLI-FSWD-VVADTRALK 136 (361)
Q Consensus 117 ~~~k~VI-FDlD-TL~ds~~~~ 136 (361)
+++++++ |||| ||++....+
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i 25 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEA 25 (245)
T ss_pred CccceEEEEeccCCCcCCCCcC
Confidence 3456555 9999 999876433
No 236
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=78.26 E-value=9.5 Score=36.49 Aligned_cols=95 Identities=13% Similarity=0.156 Sum_probs=63.3
Q ss_pred CCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCC-------------cccceeEecCCCCCCChHHHHHHH
Q 018088 202 TEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLL-------------KYFQAIVSEEDGMESMAHRFLSAA 267 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~-------------~~Fd~iv~~e~~~~~KP~~~~~~~ 267 (361)
..++||+-.|.+.|.+.| .++..|||++......+.+.++-. ..+|.++.+. ...|-..+..++
T Consensus 195 r~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~GPl~L~~~g~~~~~i~~sg--a~rK~~~l~nil 272 (373)
T COG4850 195 RQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPYGPLLLRRWGGVLDNIIESG--AARKGQSLRNIL 272 (373)
T ss_pred cCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCCCchhHhhcCCcccccccch--hhhcccHHHHHH
Confidence 378999999999999987 899999999876665555544322 1234444432 245666777777
Q ss_pred HHcCCCCCcEEEEcCC-hHHH----HHHHHcCCeEEEE
Q 018088 268 VKLDRKPSKCVVFEDD-PRAI----TAAHNCTMMAVGL 300 (361)
Q Consensus 268 ~klgi~p~~~v~IGDs-~~Di----~aA~~aG~~~v~V 300 (361)
.++. -.+.|.|||+ ..|. +|++..--...+|
T Consensus 273 ~~~p--~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I 308 (373)
T COG4850 273 RRYP--DRKFVLVGDSGEHDPEIYAEMVRCFPNRILGI 308 (373)
T ss_pred HhCC--CceEEEecCCCCcCHHHHHHHHHhCccceeeE
Confidence 7774 3678999996 4474 4555554444443
No 237
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=77.97 E-value=4.4 Score=37.29 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=38.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+.+..++.|+++++.|++++++|+.+...+...++.+++..
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 467788899999999999999999999999999999999976
No 238
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=77.96 E-value=4 Score=36.42 Aligned_cols=42 Identities=19% Similarity=0.151 Sum_probs=36.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
.+.+...+.|++|++.|++++++|+.+...+...++.+|+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~ 56 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD 56 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC
Confidence 356777889999999999999999999999999999988643
No 239
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=76.95 E-value=7.2 Score=32.15 Aligned_cols=49 Identities=14% Similarity=0.175 Sum_probs=36.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHH---------------HHHHHHHhCCCCcccceeEecC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRR---------------KMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~---------------~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
.+.+++.+.|+.++++|+.++++|+.+.. .+..+|++.++ .+|.++-+.
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~i--pYd~l~~~k 87 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNV--PYDEIYVGK 87 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCC--CCceEEeCC
Confidence 56888999999999999999999987544 44566677776 345555443
No 240
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=76.85 E-value=5.3 Score=36.76 Aligned_cols=43 Identities=14% Similarity=0.062 Sum_probs=37.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+.|...+.|++++++|++++++|+.+...+...++.+++..+
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~ 62 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTP 62 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCC
Confidence 4566778999999999999999999999999999999988643
No 241
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=75.13 E-value=34 Score=31.52 Aligned_cols=96 Identities=15% Similarity=-0.024 Sum_probs=62.2
Q ss_pred CCCCCccHHHHHHHHhhC---CCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSA---RIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~---Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
.-.++|+..++++..+.. |+.+.-+.+.+....++ +..+|-.-.- -..+++. .+...|+.+..+.+..++
T Consensus 102 ~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~-l~~~G~~~vmPlg~pIGsg-~Gi~~~~~I~~I~e~~~v--- 176 (248)
T cd04728 102 DKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKR-LEDAGCAAVMPLGSPIGSG-QGLLNPYNLRIIIERADV--- 176 (248)
T ss_pred ccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HHHcCCCEeCCCCcCCCCC-CCCCCHHHHHHHHHhCCC---
Confidence 446799999999887776 99999455544444444 4445653221 1233333 233358888888776543
Q ss_pred cEEEEcC---ChHHHHHHHHcCCeEEEEeC
Q 018088 276 KCVVFED---DPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 276 ~~v~IGD---s~~Di~aA~~aG~~~v~V~g 302 (361)
.|++|- ++.|+..|.+.|...|.|..
T Consensus 177 -pVI~egGI~tpeda~~AmelGAdgVlV~S 205 (248)
T cd04728 177 -PVIVDAGIGTPSDAAQAMELGADAVLLNT 205 (248)
T ss_pred -cEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 355554 46799999999999998843
No 242
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=74.63 E-value=8.4 Score=35.74 Aligned_cols=40 Identities=20% Similarity=0.402 Sum_probs=35.8
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
+.+...+.|++|+++|++++++|+.+...+...++.+|+.
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 3456778899999999999999999999999999999985
No 243
>PRK00208 thiG thiazole synthase; Reviewed
Probab=73.49 E-value=31 Score=31.86 Aligned_cols=96 Identities=16% Similarity=-0.030 Sum_probs=61.4
Q ss_pred CCCCCccHHHHHHHHhhC---CCcEEEEeCCCHHHHHHHHHhCCCCccc--ceeEecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 201 VTEPMEGLQEWLDAVSSA---RIPCAVVSGLDRRKMVEALERMGLLKYF--QAIVSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~---Gi~vaivSn~~~~~~~~~L~~lgl~~~F--d~iv~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
.-.++|+..++++..+.. |+.+.-+.+.+... -+.+..+|-+-.- -..+++. .+...|+.+..+.+..++
T Consensus 102 ~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~-ak~l~~~G~~~vmPlg~pIGsg-~gi~~~~~i~~i~e~~~v--- 176 (250)
T PRK00208 102 DKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVL-AKRLEEAGCAAVMPLGAPIGSG-LGLLNPYNLRIIIEQADV--- 176 (250)
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHcCCCEeCCCCcCCCCC-CCCCCHHHHHHHHHhcCC---
Confidence 345689999998887776 99999444444444 4445555653221 1233333 223358888877776544
Q ss_pred cEEEEcC---ChHHHHHHHHcCCeEEEEeC
Q 018088 276 KCVVFED---DPRAITAAHNCTMMAVGLIG 302 (361)
Q Consensus 276 ~~v~IGD---s~~Di~aA~~aG~~~v~V~g 302 (361)
.|++|- ++.|+..|.+.|...|.|..
T Consensus 177 -pVIveaGI~tpeda~~AmelGAdgVlV~S 205 (250)
T PRK00208 177 -PVIVDAGIGTPSDAAQAMELGADAVLLNT 205 (250)
T ss_pred -eEEEeCCCCCHHHHHHHHHcCCCEEEECh
Confidence 355554 45699999999999998843
No 244
>PLN03017 trehalose-phosphatase
Probab=69.69 E-value=14 Score=36.13 Aligned_cols=71 Identities=13% Similarity=-0.030 Sum_probs=49.4
Q ss_pred CCChHHHHHHHHHcCCCC---CcEEEEcCChHHHHHHHHcC-C---eEEEEeCCCCcccccCcceEeCChhhhHHHHHHh
Q 018088 257 ESMAHRFLSAAVKLDRKP---SKCVVFEDDPRAITAAHNCT-M---MAVGLIGAHRAYDLVQADLAVANFNELSVINLRR 329 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p---~~~v~IGDs~~Di~aA~~aG-~---~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~ 329 (361)
..|...+..+++.++... .-.|+|||...|-.|.+.+. . -.|.| |..+ ....|.+.+++.+|+..+| ++
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~--k~T~A~y~L~dp~eV~~fL-~~ 357 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFP--KDTDASYSLQDPSEVMDFL-AR 357 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCC--CCCcceEeCCCHHHHHHHH-HH
Confidence 357778999999988753 34899999999988887663 1 23333 3221 2256899999999998765 44
Q ss_pred hH
Q 018088 330 LF 331 (361)
Q Consensus 330 l~ 331 (361)
|.
T Consensus 358 L~ 359 (366)
T PLN03017 358 LV 359 (366)
T ss_pred HH
Confidence 43
No 245
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=68.75 E-value=1e+02 Score=28.82 Aligned_cols=200 Identities=14% Similarity=0.012 Sum_probs=0.0
Q ss_pred eEEEEece-eccc---------cHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCC-----------
Q 018088 120 YGLIFSWD-VVAD---------TRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGK----------- 178 (361)
Q Consensus 120 k~VIFDlD-TL~d---------s~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~----------- 178 (361)
++++||+| ||.+ ......+.+..++....-.. .+........++.+++...
T Consensus 19 ~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v--------~iiSGR~~~~l~~~~~v~~i~l~aehGa~~ 90 (266)
T COG1877 19 RLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVV--------AIISGRSLAELERLFGVPGIGLIAEHGAEV 90 (266)
T ss_pred eEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeE--------EEEeCCCHHHHHHhcCCCCccEEEecceEE
Q ss_pred -----------ChHHHHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeC--CCHHHHHHHHHhCCCCcc
Q 018088 179 -----------EESELDRLNSRLTQLYYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSG--LDRRKMVEALERMGLLKY 245 (361)
Q Consensus 179 -----------~~~~~~~l~~~~~~~~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn--~~~~~~~~~L~~lgl~~~ 245 (361)
.......+.....+.+++.+ ...||+ .+..+|+-+++..- .+.......+...-....
T Consensus 91 r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v----~r~pGs-----~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~ 161 (266)
T COG1877 91 RDPNGKWWINLAEEADLRWLKEVAAILEYYV----ERTPGS-----YIERKGFAVALHYRNAEDDEGAALALAEAATLIN 161 (266)
T ss_pred ecCCCCeeEecCHHHHhhHHHHHHHHHHHHh----hcCCCe-----EEEEcCcEEEEeeccCCchhhHHHHHHHHHhccc
Q ss_pred cc--------eeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcC---CeEEEEeCCCCcccccCcce
Q 018088 246 FQ--------AIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCT---MMAVGLIGAHRAYDLVQADL 314 (361)
Q Consensus 246 Fd--------~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG---~~~v~V~g~~~~~~l~~ad~ 314 (361)
.. .+|........|...+.++.++......-+++.||...|-.+...+. ..+|-+.-. ..++++
T Consensus 162 ~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~-----~t~a~~ 236 (266)
T COG1877 162 ELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVG-----STQAKF 236 (266)
T ss_pred cccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCC-----cccccc
Q ss_pred EeCChhhhHHHHHHhhHhcCCCChhhHH
Q 018088 315 AVANFNELSVINLRRLFANKGSTFMERQ 342 (361)
Q Consensus 315 vi~sl~EL~~~ll~~l~~~~~~~~~~l~ 342 (361)
...........+.+.+..++ .+.-+++
T Consensus 237 ~~~~~~~~~~~l~~~~~~~~-~~~~~~~ 263 (266)
T COG1877 237 RLAGVYGFLRSLYKLLEALG-NEARTLR 263 (266)
T ss_pred cccccHHHHHHHHHHHHHhh-hhHhhhh
No 246
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=66.86 E-value=5.8 Score=34.29 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=25.9
Q ss_pred CceEEEEece-eccccH----HHHHHHHHHHHHHhCCCC
Q 018088 118 EAYGLIFSWD-VVADTR----ALKLNAWKQLAFEEGKEI 151 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~----~~~~~a~~~~l~~~G~~~ 151 (361)
.+++|++|+| ||+... .....+|..-+++.|+..
T Consensus 27 Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~gi~v 65 (175)
T COG2179 27 GIKGVILDLDNTLVPWDNPDATPELRAWLAELKEAGIKV 65 (175)
T ss_pred CCcEEEEeccCceecccCCCCCHHHHHHHHHHHhcCCEE
Confidence 4899999999 999753 345567777777787654
No 247
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=66.26 E-value=13 Score=40.65 Aligned_cols=45 Identities=13% Similarity=0.192 Sum_probs=36.4
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd 247 (361)
++.+.....+++|.+++++++.+|+.+-....-+-+.-|+-..+.
T Consensus 705 kLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~ 749 (1140)
T KOG0208|consen 705 KLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQV 749 (1140)
T ss_pred ccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCC
Confidence 678899999999999999999999987776666666666655443
No 248
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=65.48 E-value=24 Score=33.53 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=34.5
Q ss_pred CCCCCccHHHHHHHHhhCC-CcEEEEeCCCHHHHHHHHHhCCCCcccceeEec
Q 018088 201 VTEPMEGLQEWLDAVSSAR-IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 201 ~~~~~pgv~elL~~L~~~G-i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
...++|.+-++++.+++.| ++++||||+.. ..+++.+. .+|.++-+
T Consensus 90 EPTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L~---~~dql~~s 136 (296)
T COG0731 90 EPTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEELK---LPDQLYVS 136 (296)
T ss_pred CcccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHhc---cCCEEEEE
Confidence 3467999999999999999 79999999987 44444443 34554443
No 249
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=65.45 E-value=12 Score=32.87 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=33.7
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l 240 (361)
.+.+.+.+.|++|++.|++++++|+.....+...++.+
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~ 54 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQL 54 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhC
Confidence 45678889999999999999999999999999988874
No 250
>PTZ00445 p36-lilke protein; Provisional
Probab=64.85 E-value=5.9 Score=35.69 Aligned_cols=36 Identities=6% Similarity=-0.069 Sum_probs=25.4
Q ss_pred CCCceEEEEece-eccc-----cH-------------HHHHHHHHHHHHHhCCCC
Q 018088 116 PDEAYGLIFSWD-VVAD-----TR-------------ALKLNAWKQLAFEEGKEI 151 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~d-----s~-------------~~~~~a~~~~l~~~G~~~ 151 (361)
...+|+|++|+| ||+. .. ..-...|...+.+.|++.
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 345999999999 9997 11 223456777777778764
No 251
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=64.28 E-value=25 Score=35.06 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=29.7
Q ss_pred CCChHH----HHHHHHHcCCCCCcEE-EEcCChHHHHHHHHcCCeE
Q 018088 257 ESMAHR----FLSAAVKLDRKPSKCV-VFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 257 ~~KP~~----~~~~~~klgi~p~~~v-~IGDs~~Di~aA~~aG~~~ 297 (361)
..||+. |+.-++.+.+.+.-.+ -||....|+.+=++.|+.-
T Consensus 472 lrkpE~FKiayLndl~slf~e~~PFyAGFGNriTDvisY~~vgIp~ 517 (580)
T COG5083 472 LRKPEVFKIAYLNDLKSLFIEFDPFYAGFGNRITDVISYSNVGIPK 517 (580)
T ss_pred hcChHHHHHHHHHHHHHhhCcCChhhccccccchhheeeccccCCh
Confidence 457874 4444556666666544 7899999999999999863
No 252
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=62.92 E-value=3.4 Score=38.66 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=24.1
Q ss_pred CCceEEEEece-eccccHHHHHHH--HHHHHHHhCCCC
Q 018088 117 DEAYGLIFSWD-VVADTRALKLNA--WKQLAFEEGKEI 151 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~~~~~~a--~~~~l~~~G~~~ 151 (361)
+.+++++||+| ||++....+..+ +.+.+++.|++.
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~ 43 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPV 43 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeE
Confidence 34789999999 999877654433 334455667664
No 253
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=62.77 E-value=16 Score=33.42 Aligned_cols=46 Identities=15% Similarity=0.089 Sum_probs=36.7
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEe
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVS 251 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~ 251 (361)
.|.+.++++.++++|++++++|+.....+...++.+++.. .+.+++
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~-p~~~I~ 68 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLT-PDIWVT 68 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCC-CCEEEE
Confidence 3556788889999999999999999999999988888653 344444
No 254
>PLN02151 trehalose-phosphatase
Probab=62.02 E-value=19 Score=35.05 Aligned_cols=71 Identities=11% Similarity=-0.004 Sum_probs=48.2
Q ss_pred CCChHHHHHHHHHcCCCCC---cEEEEcCChHHHHHHHHc-----CCeEEEEeCCCCcccccCcceEeCChhhhHHHHHH
Q 018088 257 ESMAHRFLSAAVKLDRKPS---KCVVFEDDPRAITAAHNC-----TMMAVGLIGAHRAYDLVQADLAVANFNELSVINLR 328 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~p~---~~v~IGDs~~Di~aA~~a-----G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~ 328 (361)
..|...+..+++.++..-. -.|+|||...|-.|.+.+ |+ .|.| +... ....|++.+++.+|+..++ +
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~V-g~~~--k~T~A~y~L~dp~eV~~~L-~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILV-SKYA--KETNASYSLQEPDEVMEFL-E 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEe-ccCC--CCCcceEeCCCHHHHHHHH-H
Confidence 3577788889998876533 289999999998887754 32 2333 2111 2236899999999998765 4
Q ss_pred hhHh
Q 018088 329 RLFA 332 (361)
Q Consensus 329 ~l~~ 332 (361)
.|..
T Consensus 343 ~L~~ 346 (354)
T PLN02151 343 RLVE 346 (354)
T ss_pred HHHH
Confidence 4433
No 255
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=61.74 E-value=4.4 Score=34.30 Aligned_cols=14 Identities=36% Similarity=0.358 Sum_probs=12.3
Q ss_pred ceEEEEece-ecccc
Q 018088 119 AYGLIFSWD-VVADT 132 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds 132 (361)
+|+|+||+| ||++.
T Consensus 1 ~~~~~~D~Dgtl~~~ 15 (154)
T TIGR01670 1 IRLLILDVDGVLTDG 15 (154)
T ss_pred CeEEEEeCceeEEcC
Confidence 479999999 99983
No 256
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=60.32 E-value=14 Score=33.53 Aligned_cols=62 Identities=10% Similarity=0.013 Sum_probs=29.7
Q ss_pred CCChHHHHHHHHHcCCC---CCcEEEEcCChHHHHHHHHcCCe-----EEEEeCCCCcccccCcceEeCC
Q 018088 257 ESMAHRFLSAAVKLDRK---PSKCVVFEDDPRAITAAHNCTMM-----AVGLIGAHRAYDLVQADLAVAN 318 (361)
Q Consensus 257 ~~KP~~~~~~~~klgi~---p~~~v~IGDs~~Di~aA~~aG~~-----~v~V~g~~~~~~l~~ad~vi~s 318 (361)
..|......++++++.. +.-++++||...|-.|.+.+.-. .+.|...........|.+.+++
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 34778899999999876 78899999999999998887553 3344222222223446666554
No 257
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=60.05 E-value=28 Score=38.85 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=46.3
Q ss_pred HHHHHHHHHhCCCCcccceeEecC-------CCCCCChHHHHHHHHHcCCCCCcEE-EEcCChH-HHHHHHHcCCe-EEE
Q 018088 230 RRKMVEALERMGLLKYFQAIVSEE-------DGMESMAHRFLSAAVKLDRKPSKCV-VFEDDPR-AITAAHNCTMM-AVG 299 (361)
Q Consensus 230 ~~~~~~~L~~lgl~~~Fd~iv~~e-------~~~~~KP~~~~~~~~klgi~p~~~v-~IGDs~~-Di~aA~~aG~~-~v~ 299 (361)
...+...|...|+... .+++.. -...+|.+.++++..++|++.++++ ++||+-| |++.. -.|.+ +|.
T Consensus 923 v~elr~~Lr~~gLr~~--~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~tvi 999 (1050)
T TIGR02468 923 VKELRKLLRIQGLRCH--AVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKTVI 999 (1050)
T ss_pred HHHHHHHHHhCCCceE--EEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeEEE
Confidence 3455555666565322 233322 1235689999999999999999995 5999999 98866 33443 554
Q ss_pred EeC
Q 018088 300 LIG 302 (361)
Q Consensus 300 V~g 302 (361)
+.|
T Consensus 1000 ~~g 1002 (1050)
T TIGR02468 1000 LKG 1002 (1050)
T ss_pred Eec
Confidence 444
No 258
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=57.88 E-value=27 Score=33.98 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=59.9
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
..-.||+.-+|..|... ++++++|+...-++..+++.++-..++..-+..+....--++- .+=+.++|.++++||+|.
T Consensus 213 f~kRPgvD~FL~~~a~~-yEIVi~sse~gmt~~pl~d~lDP~g~IsYkLfr~~t~y~~G~H-vKdls~LNRdl~kVivVd 290 (393)
T KOG2832|consen 213 FKKRPGVDYFLGHLAKY-YEIVVYSSEQGMTVFPLLDALDPKGYISYKLFRGATKYEEGHH-VKDLSKLNRDLQKVIVVD 290 (393)
T ss_pred eccCchHHHHHHhhccc-ceEEEEecCCccchhhhHhhcCCcceEEEEEecCcccccCccc-hhhhhhhccccceeEEEE
Confidence 35589999999999854 9999999988888888999987766766654444322222221 223677999999999998
Q ss_pred CChH
Q 018088 282 DDPR 285 (361)
Q Consensus 282 Ds~~ 285 (361)
=..+
T Consensus 291 ~d~~ 294 (393)
T KOG2832|consen 291 FDAN 294 (393)
T ss_pred cccc
Confidence 6555
No 259
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=57.68 E-value=5.6 Score=32.77 Aligned_cols=13 Identities=23% Similarity=0.317 Sum_probs=11.6
Q ss_pred eEEEEece-ecccc
Q 018088 120 YGLIFSWD-VVADT 132 (361)
Q Consensus 120 k~VIFDlD-TL~ds 132 (361)
|+|+||+| ||+..
T Consensus 2 K~i~~DiDGTL~~~ 15 (126)
T TIGR01689 2 KRLVMDLDNTITLT 15 (126)
T ss_pred CEEEEeCCCCcccC
Confidence 68999999 99875
No 260
>COG2896 MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism]
Probab=56.13 E-value=73 Score=30.69 Aligned_cols=82 Identities=18% Similarity=0.161 Sum_probs=51.3
Q ss_pred CCCccHHHHHHHHhhCCC-cEEEEeCCC-HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEE
Q 018088 203 EPMEGLQEWLDAVSSARI-PCAVVSGLD-RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVF 280 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi-~vaivSn~~-~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~I 280 (361)
.+..++.+++..+++.++ .+++-||+. .......|+..|+... -|+-+ .-.|+.|.++- ..|. +
T Consensus 71 llR~dl~eIi~~l~~~~~~~islTTNG~~L~~~a~~Lk~AGl~rV---NVSLD---sld~e~f~~IT-~~~~-------~ 136 (322)
T COG2896 71 LLRKDLDEIIARLARLGIRDLSLTTNGVLLARRAADLKEAGLDRV---NVSLD---SLDPEKFRKIT-GRDR-------L 136 (322)
T ss_pred hhhcCHHHHHHHHhhcccceEEEecchhhHHHHHHHHHHcCCcEE---Eeecc---cCCHHHHHHHh-CCCc-------H
Confidence 458999999999998765 467777873 2334455666787532 22222 23577777766 2222 2
Q ss_pred cCChHHHHHHHHcCCeEE
Q 018088 281 EDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 281 GDs~~Di~aA~~aG~~~v 298 (361)
..-..++.+|..+|+.-|
T Consensus 137 ~~Vl~GI~~A~~~Gl~pV 154 (322)
T COG2896 137 DRVLEGIDAAVEAGLTPV 154 (322)
T ss_pred HHHHHHHHHHHHcCCCce
Confidence 333467888888888633
No 261
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=54.79 E-value=6.1 Score=32.09 Aligned_cols=13 Identities=23% Similarity=0.590 Sum_probs=11.2
Q ss_pred eEEEEece-ecccc
Q 018088 120 YGLIFSWD-VVADT 132 (361)
Q Consensus 120 k~VIFDlD-TL~ds 132 (361)
|+++||+| ||.+.
T Consensus 1 k~~~~D~dgtL~~~ 14 (132)
T TIGR01662 1 KGVVLDLDGTLTDD 14 (132)
T ss_pred CEEEEeCCCceecC
Confidence 58999999 99963
No 262
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=53.83 E-value=1.4e+02 Score=27.76 Aligned_cols=95 Identities=9% Similarity=0.070 Sum_probs=54.4
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC-----C---------C-h---HHHHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME-----S---------M-A---HRFLS 265 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~-----~---------K-P---~~~~~ 265 (361)
-.+...+..+.+++.|-++.+.++. ..+..+........++-.++..-+... . + | +.=..
T Consensus 113 ~V~d~~ea~~~~~~~~~rVflt~G~--~~l~~f~~~~~~~~~~~Rvlp~~~~~~~~~~~~~p~~~Iia~~GPfs~~~n~a 190 (257)
T COG2099 113 EVADIEEAAEAAKQLGRRVFLTTGR--QNLAHFVAADAHSHVLARVLPPPDVLAKCEDLGVPPARIIAMRGPFSEEDNKA 190 (257)
T ss_pred EecCHHHHHHHHhccCCcEEEecCc--cchHHHhcCcccceEEEEEcCchHHHHHHHhcCCChhhEEEecCCcChHHHHH
Confidence 3556777777777776555555665 444444444444445544544322211 0 0 1 12234
Q ss_pred HHHHcCCCCCcEEEEcCChH------HHHHHHHcCCeEEEEeCC
Q 018088 266 AAVKLDRKPSKCVVFEDDPR------AITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 266 ~~~klgi~p~~~v~IGDs~~------Di~aA~~aG~~~v~V~g~ 303 (361)
.++++++ ++|+-=||-. =+.+|...|+.+|+|..+
T Consensus 191 ll~q~~i---d~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 191 LLEQYRI---DVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred HHHHhCC---CEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 5566666 4555544433 499999999999998554
No 263
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=53.45 E-value=19 Score=32.69 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=33.3
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCc
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLK 244 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~ 244 (361)
+.+++.+|++.|++|+++|+..+..+....+.+|+..
T Consensus 28 A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 28 AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 4578999999999999999999999999999998863
No 264
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=52.43 E-value=7.9 Score=33.79 Aligned_cols=15 Identities=33% Similarity=0.266 Sum_probs=13.5
Q ss_pred CceEEEEece-ecccc
Q 018088 118 EAYGLIFSWD-VVADT 132 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds 132 (361)
.+|+|+||+| ||++.
T Consensus 20 ~ikli~~D~Dgtl~~~ 35 (183)
T PRK09484 20 NIRLLICDVDGVFSDG 35 (183)
T ss_pred CceEEEEcCCeeeecC
Confidence 4899999999 99985
No 265
>PRK13762 tRNA-modifying enzyme; Provisional
Probab=51.99 E-value=49 Score=31.80 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=25.8
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRR 231 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~ 231 (361)
.++|.+.++++.+++.|+.++|.||+...
T Consensus 142 lL~p~l~eli~~~k~~Gi~~~L~TNG~~~ 170 (322)
T PRK13762 142 TLYPYLPELIEEFHKRGFTTFLVTNGTRP 170 (322)
T ss_pred cchhhHHHHHHHHHHcCCCEEEECCCCCH
Confidence 45889999999999999999999999653
No 266
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=51.81 E-value=22 Score=33.00 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=33.8
Q ss_pred CCCccHHHHHHHHhh-CCCcEEEEeCCCHHHHHHHHHhCCC
Q 018088 203 EPMEGLQEWLDAVSS-ARIPCAVVSGLDRRKMVEALERMGL 242 (361)
Q Consensus 203 ~~~pgv~elL~~L~~-~Gi~vaivSn~~~~~~~~~L~~lgl 242 (361)
.+.|.+.+.|+.|++ .|++++|+|+.+...+..+++.+++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~ 76 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRF 76 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccc
Confidence 457888899999998 7999999999999988888766553
No 267
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=51.69 E-value=2.1e+02 Score=26.76 Aligned_cols=172 Identities=17% Similarity=0.094 Sum_probs=81.5
Q ss_pred ccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHH---Hcc-----------CCC-hHHHHHHHHHHHHH
Q 018088 129 VADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKV---LLW-----------GKE-ESELDRLNSRLTQL 193 (361)
Q Consensus 129 L~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~---l~~-----------~~~-~~~~~~l~~~~~~~ 193 (361)
|-+........+.+++++.|+.....--+.+++-..++.++-..+ +.. ... ..............
T Consensus 28 l~~~~~~~~~si~elA~~a~VS~aTv~Rf~~kLGf~Gf~efk~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (281)
T COG1737 28 LANPDEVALLSIAELAERAGVSPATVVRFARKLGFEGFSEFKLALAQELAEGRAQLLREIAEDDGPESILEKLLAANIAA 107 (281)
T ss_pred HhCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCCCHHHHHHHHHHHHhhccchhhcccCCCCCHHHHHHHHHHHHHHH
Confidence 334444555667778888887655443444444444544432222 211 111 11223333333333
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCC----HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHH
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLD----RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVK 269 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~----~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~k 269 (361)
+..... ..-...+.+..+.|.+.. ++.++..+. ..++...+.++|+. ..... + ++... ...
T Consensus 108 l~~t~~--~l~~~~l~~av~~L~~A~-rI~~~G~g~S~~vA~~~~~~l~~ig~~----~~~~~-d-----~~~~~--~~~ 172 (281)
T COG1737 108 LERTLN--LLDEEALERAVELLAKAR-RIYFFGLGSSGLVASDLAYKLMRIGLN----VVALS-D-----THGQL--MQL 172 (281)
T ss_pred HHHHHH--hcCHHHHHHHHHHHHcCC-eEEEEEechhHHHHHHHHHHHHHcCCc----eeEec-c-----hHHHH--HHH
Confidence 222221 011344556667777764 444444332 33445555556652 12211 1 33232 244
Q ss_pred cCCCCCcEE-EEcCChH------HHHHHHHcCCeEEEEeCCCCcccccCcceE
Q 018088 270 LDRKPSKCV-VFEDDPR------AITAAHNCTMMAVGLIGAHRAYDLVQADLA 315 (361)
Q Consensus 270 lgi~p~~~v-~IGDs~~------Di~aA~~aG~~~v~V~g~~~~~~l~~ad~v 315 (361)
..+.|++++ +|.-+.. =++.|+..|+++|++++.....-...+|++
T Consensus 173 ~~~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~spla~~Ad~~ 225 (281)
T COG1737 173 ALLTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSADSPLAKLADIV 225 (281)
T ss_pred HhCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCCCCCchhhhhceE
Confidence 455677655 4544432 256777889999999766444333334444
No 268
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=51.01 E-value=1.2e+02 Score=29.29 Aligned_cols=96 Identities=13% Similarity=-0.036 Sum_probs=63.0
Q ss_pred cCCCCCccHHHHHHHHhhC---CCcEEEEeCCCHHHHHHHHHhCCCCc--ccceeEecCCCCCCChHHHHHHHHHcCCCC
Q 018088 200 SVTEPMEGLQEWLDAVSSA---RIPCAVVSGLDRRKMVEALERMGLLK--YFQAIVSEEDGMESMAHRFLSAAVKLDRKP 274 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~---Gi~vaivSn~~~~~~~~~L~~lgl~~--~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p 274 (361)
+...++|+..++++..+.. |+.+.++.+.+....++ +..+|-.- ..-..|++.. +-.+|+.+..+.+...+
T Consensus 175 e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~-l~~~g~~avmPl~~pIGsg~-gv~~p~~i~~~~e~~~v-- 250 (326)
T PRK11840 175 DAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKR-LEDAGAVAVMPLGAPIGSGL-GIQNPYTIRLIVEGATV-- 250 (326)
T ss_pred CCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHH-HHhcCCEEEeeccccccCCC-CCCCHHHHHHHHHcCCC--
Confidence 3446789999998887776 99995665555454444 44455410 0122233222 23379999999988443
Q ss_pred CcEEEEcCC---hHHHHHHHHcCCeEEEEe
Q 018088 275 SKCVVFEDD---PRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 275 ~~~v~IGDs---~~Di~aA~~aG~~~v~V~ 301 (361)
-|++|-+ +.|+..|-..|...|.+.
T Consensus 251 --pVivdAGIg~~sda~~AmelGadgVL~n 278 (326)
T PRK11840 251 --PVLVDAGVGTASDAAVAMELGCDGVLMN 278 (326)
T ss_pred --cEEEeCCCCCHHHHHHHHHcCCCEEEEc
Confidence 4667764 469999999999999884
No 269
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=49.37 E-value=6.8 Score=34.94 Aligned_cols=23 Identities=9% Similarity=0.146 Sum_probs=15.9
Q ss_pred CccHHHHHHHHhhCCCcEEEEeC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSG 227 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn 227 (361)
..-+..+++.+.++++.+.+.++
T Consensus 81 ~~~~~~i~~~~~~~~~~~~~~~~ 103 (254)
T PF08282_consen 81 SDDVKKILKYLKEHNISFFFYTD 103 (254)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEES
T ss_pred ccchhheeehhhhcccccccccc
Confidence 34466777888887777777664
No 270
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=48.84 E-value=2.5e+02 Score=26.82 Aligned_cols=28 Identities=4% Similarity=-0.092 Sum_probs=24.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR 230 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~ 230 (361)
.+.|++.++++.+++.|..+.+.||+..
T Consensus 84 LL~pdl~eiv~~~~~~g~~v~l~TNG~l 111 (318)
T TIGR03470 84 LLHPEIDEIVRGLVARKKFVYLCTNALL 111 (318)
T ss_pred cccccHHHHHHHHHHcCCeEEEecCcee
Confidence 4589999999999999999999999853
No 271
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=48.50 E-value=61 Score=31.18 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=55.0
Q ss_pred cCCCCCccHHHHHHHHhhC----CCcEEEEeCCC----HHHHHHHHHhCCCCcccceeEecCCCCCC-ChHHHHHHHHHc
Q 018088 200 SVTEPMEGLQEWLDAVSSA----RIPCAVVSGLD----RRKMVEALERMGLLKYFQAIVSEEDGMES-MAHRFLSAAVKL 270 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~----Gi~vaivSn~~----~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~-KP~~~~~~~~kl 270 (361)
....+.||+.+.|+.|.++ .++.+++||+. ...+..+=+.+|+. ++.+++..+ .| |+... .
T Consensus 48 RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~------Vs~dqviqSHsP--~r~l~-~- 117 (389)
T KOG1618|consen 48 RGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE------VSADQVIQSHSP--FRLLV-E- 117 (389)
T ss_pred ecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc------cCHHHHHhhcCh--HHHHh-h-
Confidence 3457899999999999998 89999999963 22233333334543 222222211 23 33333 1
Q ss_pred CCCCCcEEEEcCChHHHHHHHHcCCeEE
Q 018088 271 DRKPSKCVVFEDDPRAITAAHNCTMMAV 298 (361)
Q Consensus 271 gi~p~~~v~IGDs~~Di~aA~~aG~~~v 298 (361)
..-++++++|++.. .+.|+.-|++-|
T Consensus 118 -~~~k~vLv~G~~~v-r~vAegyGFk~V 143 (389)
T KOG1618|consen 118 -YHYKRVLVVGQGSV-REVAEGYGFKNV 143 (389)
T ss_pred -hhhceEEEecCCcH-HHHhhccCccce
Confidence 23478999997654 577888888754
No 272
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=48.23 E-value=2.3e+02 Score=26.21 Aligned_cols=59 Identities=17% Similarity=0.125 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHcCCCCCcEEEE----cCChH---HHHHHHHcCCeEEEEeCCCCcccccCcceEeC
Q 018088 259 MAHRFLSAAVKLDRKPSKCVVF----EDDPR---AITAAHNCTMMAVGLIGAHRAYDLVQADLAVA 317 (361)
Q Consensus 259 KP~~~~~~~~klgi~p~~~v~I----GDs~~---Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~ 317 (361)
-++.....+...++.+++++++ |.++. -++.|++.|+.++++++.....-...+|+.+.
T Consensus 103 d~~~~~~~l~a~~l~~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~I~It~~~~s~L~~~aD~~I~ 168 (257)
T cd05007 103 DEEAGAADLQAINLTERDVVIGIAASGRTPYVLGALRYARARGALTIGIACNPGSPLLQLADIAIA 168 (257)
T ss_pred hHHHHHHHHHHcCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhHHhCCEEEE
Confidence 3666777777888888887743 23333 47788889999999976554443344565543
No 273
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=48.03 E-value=32 Score=36.54 Aligned_cols=41 Identities=10% Similarity=0.051 Sum_probs=36.1
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcc
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKY 245 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~ 245 (361)
.+...+.|+.|+++|++++++|+.....+...++.+++..+
T Consensus 435 ~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~ 475 (694)
T PRK14502 435 YSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDP 475 (694)
T ss_pred CHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCe
Confidence 45678899999999999999999999999999999987543
No 274
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=47.91 E-value=2.3e+02 Score=26.23 Aligned_cols=59 Identities=10% Similarity=0.091 Sum_probs=39.6
Q ss_pred HHHHHHcCCCCCcEEEEcCC------hHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHh
Q 018088 264 LSAAVKLDRKPSKCVVFEDD------PRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRR 329 (361)
Q Consensus 264 ~~~~~klgi~p~~~v~IGDs------~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~ 329 (361)
..+++++++ ++++-=|| ..=+.+|++.|+.++.|..+.. ..+..++.+++|+...+.+.
T Consensus 190 ~al~~~~~i---~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~----~~~~~~~~~~~el~~~l~~~ 254 (256)
T TIGR00715 190 KALLREYRI---DAVVTKASGEQGGELEKVKAAEALGINVIRIARPQT----IPGVAIFDDISQLNQFVARL 254 (256)
T ss_pred HHHHHHcCC---CEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCCC----CCCCccCCCHHHHHHHHHHh
Confidence 455677776 35555444 3458999999999998854321 22346788999998876654
No 275
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=47.75 E-value=1.4e+02 Score=28.64 Aligned_cols=92 Identities=14% Similarity=0.158 Sum_probs=55.9
Q ss_pred HHHHHHHHhhC-CCc-EEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCC---C-hHHHHHHHHHc-CCCCCcEEEE
Q 018088 208 LQEWLDAVSSA-RIP-CAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES---M-AHRFLSAAVKL-DRKPSKCVVF 280 (361)
Q Consensus 208 v~elL~~L~~~-Gi~-vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~---K-P~~~~~~~~kl-gi~p~~~v~I 280 (361)
+..++++|+++ ++. ..++|+.........++.+++..-++..+.. . +.. + +..+..+.+.+ ...|+=+++.
T Consensus 16 ~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~l~~~~pDiv~~~ 93 (365)
T TIGR00236 16 MAPLIRALKKYPEIDSYVIVTAQHREMLDQVLDLFHLPPDYDLNIMS-P-GQTLGEITSNMLEGLEELLLEEKPDIVLVQ 93 (365)
T ss_pred HHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeeeecCC-C-CCCHHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 45678888875 444 4677888877888888788886333333332 1 122 1 22333333222 2347777888
Q ss_pred cCChH---HHHHHHHcCCeEEEEe
Q 018088 281 EDDPR---AITAAHNCTMMAVGLI 301 (361)
Q Consensus 281 GDs~~---Di~aA~~aG~~~v~V~ 301 (361)
||... ...+|+..|++.+.+.
T Consensus 94 gd~~~~la~a~aa~~~~ipv~h~~ 117 (365)
T TIGR00236 94 GDTTTTLAGALAAFYLQIPVGHVE 117 (365)
T ss_pred CCchHHHHHHHHHHHhCCCEEEEe
Confidence 99654 4567777899988774
No 276
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=47.72 E-value=39 Score=30.38 Aligned_cols=41 Identities=12% Similarity=0.179 Sum_probs=31.6
Q ss_pred HHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec
Q 018088 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE 252 (361)
Q Consensus 210 elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~ 252 (361)
++++ ++++|++++++|+.....+..+++.+++. ..+.+++.
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~-~~~~~I~~ 62 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLP-SPDVLIAR 62 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCC-CCCEEEEC
Confidence 3455 57789999999999999999999999885 33444443
No 277
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=46.05 E-value=2.4e+02 Score=25.97 Aligned_cols=86 Identities=16% Similarity=0.134 Sum_probs=55.5
Q ss_pred HHHHhhC-CCcEEEEeCCC---HHHHHHHHHhC--CCCcccce-eEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 212 LDAVSSA-RIPCAVVSGLD---RRKMVEALERM--GLLKYFQA-IVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 212 L~~L~~~-Gi~vaivSn~~---~~~~~~~L~~l--gl~~~Fd~-iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
|++..++ ++.+-+++++. ...+......+ .+. .|. |+.+.....+-|..-+++++..|+ -||+|||++
T Consensus 23 lDErAdRedI~vrv~gsGaKm~pe~~~~~~~~~~~~~~--pDf~i~isPN~a~PGP~~ARE~l~~~~i---P~IvI~D~p 97 (277)
T PRK00994 23 LDERADREDIDVRVVGSGAKMGPEEVEEVVKKMLEEWK--PDFVIVISPNPAAPGPKKAREILKAAGI---PCIVIGDAP 97 (277)
T ss_pred HHhhhcccCceEEEeccCCCCCHHHHHHHHHHHHHhhC--CCEEEEECCCCCCCCchHHHHHHHhcCC---CEEEEcCCC
Confidence 4444444 78999998764 33333332222 222 243 444444445557777888888888 499999998
Q ss_pred H--HHHHHHHcCCeEEEEeC
Q 018088 285 R--AITAAHNCTMMAVGLIG 302 (361)
Q Consensus 285 ~--Di~aA~~aG~~~v~V~g 302 (361)
. +....++.|++-|.+..
T Consensus 98 ~~K~~d~l~~~g~GYIivk~ 117 (277)
T PRK00994 98 GKKVKDAMEEQGLGYIIVKA 117 (277)
T ss_pred ccchHHHHHhcCCcEEEEec
Confidence 6 67889999999887743
No 278
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=45.96 E-value=24 Score=31.95 Aligned_cols=45 Identities=29% Similarity=0.456 Sum_probs=30.3
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
+.++|..|++. +.|+|||+++..-+...+....+...||.++...
T Consensus 1 M~~~L~~L~~~-~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~en 45 (220)
T PF03332_consen 1 MAELLQKLRKK-VPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPEN 45 (220)
T ss_dssp HHHHHHHHHTT-SEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGG
T ss_pred CHHHHHHHHhc-CeEEEEcchhHHHHHHHHcccchHhhCCeeecCC
Confidence 46789999976 9999999997766665553223445678777553
No 279
>PLN02887 hydrolase family protein
Probab=45.11 E-value=49 Score=34.63 Aligned_cols=41 Identities=17% Similarity=0.223 Sum_probs=37.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL 243 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~ 243 (361)
.+.+...+.|++++++|++++++|+.....+...++.+++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 46778899999999999999999999999999999988874
No 280
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=44.85 E-value=13 Score=32.27 Aligned_cols=16 Identities=31% Similarity=0.374 Sum_probs=14.0
Q ss_pred CceEEEEece-eccccH
Q 018088 118 EAYGLIFSWD-VVADTR 133 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~ 133 (361)
.+|++|||+| ||.|..
T Consensus 6 ~i~~~v~d~dGv~tdg~ 22 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGR 22 (169)
T ss_pred cCeEEEEeCceeeECCe
Confidence 4899999999 999864
No 281
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=44.80 E-value=61 Score=31.40 Aligned_cols=87 Identities=14% Similarity=0.139 Sum_probs=50.9
Q ss_pred HHhhC-CCcEE-EEeCCC--HHHHHHHHHhCCCCcccceeEecCCCCCCC--hHH---HHHHHHHcCCCCCcEEEEcCCh
Q 018088 214 AVSSA-RIPCA-VVSGLD--RRKMVEALERMGLLKYFQAIVSEEDGMESM--AHR---FLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 214 ~L~~~-Gi~va-ivSn~~--~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~---~~~~~~klgi~p~~~v~IGDs~ 284 (361)
+|++. ++++. |+|+.. ..+...+.+.+++ ...+..+..+.....+ ... +..++.+. .|+=+++.||+.
T Consensus 2 ~l~~~~~~~~~li~tG~H~~~~~g~~~~~~f~i-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~Pd~Vlv~GD~~ 78 (346)
T PF02350_consen 2 ALQKDPGFELILIVTGQHLDPEMGDTFFEGFGI-PKPDYLLDSDSQSMAKSTGLAIIELADVLERE--KPDAVLVLGDRN 78 (346)
T ss_dssp HHHCSTTEEEEEEEECSS--CHHHHHHHHHTT---SEEEE--STTS-HHHHHHHHHHHHHHHHHHH--T-SEEEEETTSH
T ss_pred hhhhCCCCCEEEEEeCCCCCHHHHHHHHhhCCC-CCCCcccccccchHHHHHHHHHHHHHHHHHhc--CCCEEEEEcCCc
Confidence 45554 55554 557765 7788888888888 6777777754421122 223 33333333 789999999998
Q ss_pred H---HHHHHHHcCCeEEEEeCC
Q 018088 285 R---AITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 285 ~---Di~aA~~aG~~~v~V~g~ 303 (361)
. ...+|...+++.+.|.++
T Consensus 79 ~~la~alaA~~~~ipv~HieaG 100 (346)
T PF02350_consen 79 EALAAALAAFYLNIPVAHIEAG 100 (346)
T ss_dssp HHHHHHHHHHHTT-EEEEES--
T ss_pred hHHHHHHHHHHhCCCEEEecCC
Confidence 6 456677789999988443
No 282
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=43.29 E-value=12 Score=31.60 Aligned_cols=14 Identities=14% Similarity=0.335 Sum_probs=11.3
Q ss_pred eEEEEece-eccccH
Q 018088 120 YGLIFSWD-VVADTR 133 (361)
Q Consensus 120 k~VIFDlD-TL~ds~ 133 (361)
|++|||+| ||+++.
T Consensus 1 k~LVlDLD~TLv~~~ 15 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSS 15 (159)
T ss_dssp EEEEEE-CTTTEEEE
T ss_pred CEEEEeCCCcEEEEe
Confidence 57999999 999876
No 283
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=42.13 E-value=1.1e+02 Score=31.22 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=57.0
Q ss_pred cCCCCCccHHHHHHHHhhC--CCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh---HHHHHHHHH-----
Q 018088 200 SVTEPMEGLQEWLDAVSSA--RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA---HRFLSAAVK----- 269 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~--Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP---~~~~~~~~k----- 269 (361)
..++.-|.+.+.++.+... ++..-.+- ......+.+.+++...-..++..+....+++ +....+.+.
T Consensus 127 ~~Cp~Cp~~v~~~~~~a~~~p~i~~~~id---~~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~l~~~~~~~~ 203 (515)
T TIGR03140 127 LTCQNCPDVVQALNQMALLNPNISHTMID---GALFQDEVEALGIQGVPAVFLNGEEFHNGRMDLAELLEKLEETAGVEA 203 (515)
T ss_pred CCCCCCHHHHHHHHHHHHhCCCceEEEEE---chhCHHHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHhhccCccc
Confidence 3455677888888777665 23322222 2334445566676654455555443333432 233333222
Q ss_pred ----cCCCCCcEEEEcCChHHHHHHHHc---CCeEEEE
Q 018088 270 ----LDRKPSKCVVFEDDPRAITAAHNC---TMMAVGL 300 (361)
Q Consensus 270 ----lgi~p~~~v~IGDs~~Di~aA~~a---G~~~v~V 300 (361)
-...+.++++||=++.++.+|..+ |..++.+
T Consensus 204 ~~~~~~~~~~dVvIIGgGpAGl~AA~~la~~G~~v~li 241 (515)
T TIGR03140 204 ASALEQLDPYDVLVVGGGPAGAAAAIYAARKGLRTAMV 241 (515)
T ss_pred chhccccCCCCEEEECCCHHHHHHHHHHHHCCCcEEEE
Confidence 224567899999999999888775 7777665
No 284
>PRK11337 DNA-binding transcriptional repressor RpiR; Provisional
Probab=41.71 E-value=2.9e+02 Score=25.63 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=51.8
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHH-H---HHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEE-E
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRK-M---VEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCV-V 279 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~-~---~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v-~ 279 (361)
.+.+.++.+.+.+.. ++.++..+.... + ...+.++|+. ..+ ..+ .+..... ...+.+++++ +
T Consensus 127 ~~~l~~~~~~i~~A~-~I~i~G~G~S~~~A~~l~~~l~~~g~~----~~~-~~d-----~~~~~~~--~~~~~~~Dl~I~ 193 (292)
T PRK11337 127 VDEFHRAARFFYQAR-QRDLYGAGGSAAIARDVQHKFLRIGVR----CQA-YDD-----AHIMLMS--AALLQEGDVVLV 193 (292)
T ss_pred HHHHHHHHHHHHcCC-eEEEEEecHHHHHHHHHHHHHhhCCCe----EEE-cCC-----HHHHHHH--HhcCCCCCEEEE
Confidence 356777778887774 455554443222 2 2223334431 111 111 2322222 2245677755 4
Q ss_pred EcCC---hH---HHHHHHHcCCeEEEEeCCCCcccccCcceEe
Q 018088 280 FEDD---PR---AITAAHNCTMMAVGLIGAHRAYDLVQADLAV 316 (361)
Q Consensus 280 IGDs---~~---Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi 316 (361)
|.-+ .. =++.|+..|+++|++++.........+|+++
T Consensus 194 iS~sG~t~~~~~~~~~ak~~g~~ii~IT~~~~s~la~~ad~~l 236 (292)
T PRK11337 194 VSHSGRTSDVIEAVELAKKNGAKIICITNSYHSPIAKLADYVI 236 (292)
T ss_pred EeCCCCCHHHHHHHHHHHHCCCeEEEEeCCCCChhHHhCCEEE
Confidence 4332 22 2567788899999997765555445566655
No 285
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=41.61 E-value=24 Score=33.26 Aligned_cols=75 Identities=9% Similarity=-0.074 Sum_probs=45.6
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCC-Ccc-------cceeEecCCCC-------CCC---hHHHHHHHHH
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGL-LKY-------FQAIVSEEDGM-------ESM---AHRFLSAAVK 269 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl-~~~-------Fd~iv~~e~~~-------~~K---P~~~~~~~~k 269 (361)
+.+-|..|++.|+++++||++.-..-...+...+. ..- ++.+-...... .+. ...|.....+
T Consensus 36 l~~~i~~l~~~g~~vilVssGAv~~G~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~qa~aa~gq~~L~~~y~~~f~~ 115 (284)
T cd04256 36 IVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDMPQMELDGRACAAVGQSGLMALYEAMFTQ 115 (284)
T ss_pred HHHHHHHHHHCCCEEEEEeeCcHHhChHHhhhccccccchhhhcccccccCCcchhHHHHHHHHcccHHHHHHHHHHHHH
Confidence 44567778889999999998876666666654332 000 00000000000 011 3478899999
Q ss_pred cCCCCCcEEEEcC
Q 018088 270 LDRKPSKCVVFED 282 (361)
Q Consensus 270 lgi~p~~~v~IGD 282 (361)
+++.+.|++.-.+
T Consensus 116 ~~~~~~q~llt~~ 128 (284)
T cd04256 116 YGITVAQVLVTKP 128 (284)
T ss_pred cCCcHHHeeeecc
Confidence 9999999976665
No 286
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=41.31 E-value=1.2e+02 Score=28.78 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=55.3
Q ss_pred CCCccHHHHHHHHhhCCCc---------EEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCC
Q 018088 203 EPMEGLQEWLDAVSSARIP---------CAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRK 273 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~---------vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~ 273 (361)
.-.++..++++.|+.+ ++ ++.+|....+.++.+... .|.++-...-..+--.-+.+++++.|.
T Consensus 168 ls~ddt~~Iv~~l~~r-~p~~~~~~~~~ICyAT~nRQ~Avk~la~~------~Dl~iVVG~~nSSNs~rL~eiA~~~g~- 239 (294)
T COG0761 168 LSVDDTAEIVAALKER-FPKIEVPPFNDICYATQNRQDAVKELAPE------VDLVIVVGSKNSSNSNRLAEIAKRHGK- 239 (294)
T ss_pred cCHHHHHHHHHHHHHh-CccccCCcccccchhhhhHHHHHHHHhhc------CCEEEEECCCCCccHHHHHHHHHHhCC-
Confidence 3477788888888877 55 344444333333333332 344333222112235678899999998
Q ss_pred CCcEEEEcCChHHHHHHHHcCCeEEEEeCC
Q 018088 274 PSKCVVFEDDPRAITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 274 p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~ 303 (361)
+. +.| |++.||....-.|..+|+|+..
T Consensus 240 ~a--ylI-d~~~ei~~~w~~~~~~VGvTAG 266 (294)
T COG0761 240 PA--YLI-DDAEEIDPEWLKGVKTVGVTAG 266 (294)
T ss_pred Ce--EEe-CChHhCCHHHhcCccEEEEecC
Confidence 44 344 6677899999999999999533
No 287
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=40.72 E-value=14 Score=30.80 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=12.9
Q ss_pred eEEEEece-eccccHH
Q 018088 120 YGLIFSWD-VVADTRA 134 (361)
Q Consensus 120 k~VIFDlD-TL~ds~~ 134 (361)
++++||+| ||.++..
T Consensus 1 ~~~~~d~dgtl~~~~~ 16 (147)
T TIGR01656 1 PALFLDRDGVINEDTV 16 (147)
T ss_pred CeEEEeCCCceeccCC
Confidence 47999999 9998874
No 288
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=39.61 E-value=1.3e+02 Score=30.87 Aligned_cols=98 Identities=10% Similarity=0.099 Sum_probs=56.7
Q ss_pred cCCCCCccHHHHHHHHhhC--CCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC-h--HHHHHHHHHcC---
Q 018088 200 SVTEPMEGLQEWLDAVSSA--RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM-A--HRFLSAAVKLD--- 271 (361)
Q Consensus 200 ~~~~~~pgv~elL~~L~~~--Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K-P--~~~~~~~~klg--- 271 (361)
..++.-|.+...++.+... .+..-.+ +......+.+.+++...-..++..+....++ | +.+..+.+..+
T Consensus 126 ~~Cp~Cp~~v~~~~~~a~~~~~i~~~~i---d~~~~~~~~~~~~v~~VP~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~ 202 (517)
T PRK15317 126 LSCHNCPDVVQALNLMAVLNPNITHTMI---DGALFQDEVEARNIMAVPTVFLNGEEFGQGRMTLEEILAKLDTGAAARA 202 (517)
T ss_pred CCCCCcHHHHHHHHHHHHhCCCceEEEE---EchhCHhHHHhcCCcccCEEEECCcEEEecCCCHHHHHHHHhccccccc
Confidence 3345577888888777664 2333333 2244455555667664444455443333333 2 33333333222
Q ss_pred ------CCCCcEEEEcCChHHHHHHHHc---CCeEEEE
Q 018088 272 ------RKPSKCVVFEDDPRAITAAHNC---TMMAVGL 300 (361)
Q Consensus 272 ------i~p~~~v~IGDs~~Di~aA~~a---G~~~v~V 300 (361)
...-++++||=++.++.+|..+ |..++.+
T Consensus 203 ~~~~~~~~~~dvvIIGgGpaGl~aA~~la~~G~~v~li 240 (517)
T PRK15317 203 AEELNAKDPYDVLVVGGGPAGAAAAIYAARKGIRTGIV 240 (517)
T ss_pred hhhcccCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEE
Confidence 3345899999999999998875 7777666
No 289
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=38.59 E-value=40 Score=29.56 Aligned_cols=71 Identities=18% Similarity=0.200 Sum_probs=29.8
Q ss_pred HHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC-----CCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERM-----GLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 210 elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l-----gl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
.+|..++++|++++++.+............+ .+...||.|...++ .-..-..++|++++++.+.||--
T Consensus 109 nll~~a~~~~ip~~LvNarls~~s~~~~~~~~~~~r~~l~~f~~i~aqs~-------~da~r~~~lG~~~~~v~v~GnlK 181 (186)
T PF04413_consen 109 NLLREAKRRGIPVVLVNARLSERSFRRYRRFPFLFRPLLSRFDRILAQSE-------ADAERFRKLGAPPERVHVTGNLK 181 (186)
T ss_dssp HHHHH-----S-EEEEEE--------------HHHHHHGGG-SEEEESSH-------HHHHHHHTTT-S--SEEE---GG
T ss_pred HHHHHHhhcCCCEEEEeeeeccccchhhhhhHHHHHHHHHhCCEEEECCH-------HHHHHHHHcCCCcceEEEeCcch
Confidence 4688899999999999874333222221111 12345677776533 23445667999999999999977
Q ss_pred HHH
Q 018088 285 RAI 287 (361)
Q Consensus 285 ~Di 287 (361)
-|.
T Consensus 182 fd~ 184 (186)
T PF04413_consen 182 FDQ 184 (186)
T ss_dssp G--
T ss_pred hcc
Confidence 664
No 290
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=37.36 E-value=82 Score=33.36 Aligned_cols=95 Identities=13% Similarity=0.107 Sum_probs=62.9
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--cccc-eeEecC--CCCCC----------------ChH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--KYFQ-AIVSEE--DGMES----------------MAH 261 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--~~Fd-~iv~~e--~~~~~----------------KP~ 261 (361)
+|..+..+.+..-...|..+-.+|+.........-.++|.. -|-. ...+.+ +.... -|+
T Consensus 492 pprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpe 571 (942)
T KOG0205|consen 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPE 571 (942)
T ss_pred CCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHH
Confidence 34667788888888899999999998777777777777543 2221 111111 11111 143
Q ss_pred HHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeE
Q 018088 262 RFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMA 297 (361)
Q Consensus 262 ~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~ 297 (361)
--..+.+++.-..--|-|.||+.||..+.+.|-.+.
T Consensus 572 hKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigi 607 (942)
T KOG0205|consen 572 HKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGI 607 (942)
T ss_pred HHHHHHHHHhhcCceecccCCCcccchhhcccccce
Confidence 334456666555566889999999999999997763
No 291
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=37.00 E-value=26 Score=25.03 Aligned_cols=24 Identities=13% Similarity=0.005 Sum_probs=14.6
Q ss_pred HHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 264 LSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 264 ~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
+..++++|+ .|++||...|++++.
T Consensus 8 qQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 8 QQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHCCE----EEEeCChHHHHHHHH
Confidence 557788887 899999999998875
No 292
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=36.64 E-value=2.7e+02 Score=25.70 Aligned_cols=91 Identities=12% Similarity=0.069 Sum_probs=53.5
Q ss_pred CCCccHHHHHHHHhhCCCcEE-EEeCCC-HHHHHHHHHhCCCCcccceeEecCCCCCC----ChH---HHHHHHHHcCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCA-VVSGLD-RRKMVEALERMGLLKYFQAIVSEEDGMES----MAH---RFLSAAVKLDRK 273 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~va-ivSn~~-~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~----KP~---~~~~~~~klgi~ 273 (361)
.+.+...++++.++++|+..+ +++-.. .+.+...++.. +-|..+++....... .++ .+..+.+..+.
T Consensus 124 lp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~---~gfiy~vs~~G~TG~~~~~~~~~~~~i~~lr~~~~~- 199 (256)
T TIGR00262 124 LPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS---QGFVYLVSRAGVTGARNRAASALNELVKRLKAYSAK- 199 (256)
T ss_pred CChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC---CCCEEEEECCCCCCCcccCChhHHHHHHHHHhhcCC-
Confidence 345678889999999998866 555443 34555555543 224455554322211 133 33333333333
Q ss_pred CCcEEEEcCCh---HHHHHHHHcCCeEEEE
Q 018088 274 PSKCVVFEDDP---RAITAAHNCTMMAVGL 300 (361)
Q Consensus 274 p~~~v~IGDs~---~Di~aA~~aG~~~v~V 300 (361)
-|++|=+. .++..+..+|...+.|
T Consensus 200 ---pi~vgfGI~~~e~~~~~~~~GADgvVv 226 (256)
T TIGR00262 200 ---PVLVGFGISKPEQVKQAIDAGADGVIV 226 (256)
T ss_pred ---CEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 36677655 4888888899987765
No 293
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=36.35 E-value=81 Score=31.12 Aligned_cols=94 Identities=10% Similarity=0.054 Sum_probs=57.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCC------------HHHHHHHHHhCCCCcccceeEecCCCCCCChH--HHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLD------------RRKMVEALERMGLLKYFQAIVSEEDGMESMAH--RFLSAAV 268 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~------------~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~--~~~~~~~ 268 (361)
.+.|.+..=|+.|.+.||.++|.||.. +.-+....+.+++ .|......-....+||- ++....+
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~v--Pi~~~~A~~~~~yRKP~tGMwe~~~~ 181 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGV--PIQLLAAIIKGKYRKPSTGMWEFLKR 181 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCC--ceEEeeeccCCcccCcchhHHHHHHH
Confidence 346667777899999999999999742 2334444444454 34333333334456873 4444443
Q ss_pred Hc----CCCCCcEEEEcCC---------------hHHHHHHHHcCCeEE
Q 018088 269 KL----DRKPSKCVVFEDD---------------PRAITAAHNCTMMAV 298 (361)
Q Consensus 269 kl----gi~p~~~v~IGDs---------------~~Di~aA~~aG~~~v 298 (361)
.+ -+.-..++++||. -.|+.-|.|+|+...
T Consensus 182 ~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 182 LENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 33 3444556677763 237889999998754
No 294
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=36.32 E-value=20 Score=30.85 Aligned_cols=15 Identities=27% Similarity=0.299 Sum_probs=13.0
Q ss_pred ceEEEEece-eccccH
Q 018088 119 AYGLIFSWD-VVADTR 133 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~ 133 (361)
.|.++||+| ||+.+.
T Consensus 13 ~k~~~~D~Dgtl~~~~ 28 (166)
T TIGR01664 13 SKVAAFDLDGTLITTR 28 (166)
T ss_pred CcEEEEeCCCceEecC
Confidence 689999999 999754
No 295
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein. This enzyme is a member of the radical-SAM family (pfam04055). It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, TIGR02487) and presumably fulfills the identical function as NrdG which utilizes S-adenosyl methionine, an iron-sulfur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centered radical in NrdD.
Probab=35.39 E-value=76 Score=27.43 Aligned_cols=39 Identities=18% Similarity=0.259 Sum_probs=28.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMG 241 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lg 241 (361)
.+.+.+.++++.+++.|+.+.+.||+........+...|
T Consensus 74 ll~~~l~~li~~~~~~g~~v~i~TNg~~~~~l~~l~~~g 112 (191)
T TIGR02495 74 TLQAGLPDFLRKVRELGFEVKLDTNGSNPRVLEELLEEG 112 (191)
T ss_pred cCcHhHHHHHHHHHHCCCeEEEEeCCCCHHHHHHHHhcC
Confidence 346778999999999999999999996443333333344
No 296
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=34.78 E-value=3.2e+02 Score=24.84 Aligned_cols=91 Identities=7% Similarity=-0.050 Sum_probs=52.0
Q ss_pred ccHHHHHHHHhhCCCcEEEEeCC--CHHHHHHHHHhCCCCcccceeEecCCCCCCC--hHHHHHHHHHcCCCCCcEEEEc
Q 018088 206 EGLQEWLDAVSSARIPCAVVSGL--DRRKMVEALERMGLLKYFQAIVSEEDGMESM--AHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 206 pgv~elL~~L~~~Gi~vaivSn~--~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K--P~~~~~~~~klgi~p~~~v~IG 281 (361)
+...++++.++++|++.+++-+. +.+.+...++.. +.|-.+ +...+...+ ++....+.+--.+.++..+.+|
T Consensus 116 ~~~~~~~~~~~~~Gl~~~~~v~p~T~~e~l~~~~~~~---~~~l~m-sv~~~~g~~~~~~~~~~i~~lr~~~~~~~i~v~ 191 (244)
T PRK13125 116 DDLEKYVEIIKNKGLKPVFFTSPKFPDLLIHRLSKLS---PLFIYY-GLRPATGVPLPVSVERNIKRVRNLVGNKYLVVG 191 (244)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhC---CCEEEE-EeCCCCCCCchHHHHHHHHHHHHhcCCCCEEEe
Confidence 56778999999999999888665 334555555543 222211 322221122 3322222211122223347788
Q ss_pred CCh---HHHHHHHHcCCeEEEE
Q 018088 282 DDP---RAITAAHNCTMMAVGL 300 (361)
Q Consensus 282 Ds~---~Di~aA~~aG~~~v~V 300 (361)
=+. .++..+..+|...+.+
T Consensus 192 gGI~~~e~i~~~~~~gaD~vvv 213 (244)
T PRK13125 192 FGLDSPEDARDALSAGADGVVV 213 (244)
T ss_pred CCcCCHHHHHHHHHcCCCEEEE
Confidence 776 4788888899987765
No 297
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=34.03 E-value=2.2e+02 Score=25.87 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=46.0
Q ss_pred hCCCcEEEE--eCCCHHH---HHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 217 SARIPCAVV--SGLDRRK---MVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 217 ~~Gi~vaiv--Sn~~~~~---~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
.-|+++..+ ++....+ +...++..| ++.+++++..-..--.....+|+++|+.+--=+-=-|...=+...-
T Consensus 56 algipl~~~~~~~~~e~~~e~l~~~l~~~g----v~~vv~GdI~s~~qr~~~e~v~~~lgl~~~~PLW~~~~~~ll~e~i 131 (223)
T TIGR00290 56 SIGIPLIKLYTEGTEEDEVEELKGILHTLD----VEAVVFGAIYSEYQKTRIERVCRELGLKSFAPLWHRDPEKLMEEFV 131 (223)
T ss_pred HcCCCeEEeecCCCccHHHHHHHHHHHHcC----CCEEEECCcccHHHHHHHHHHHHhcCCEEeccccCCCHHHHHHHHH
Confidence 347776542 2222233 334444455 5788888764433345678899999986432222223333466777
Q ss_pred HcCCeEEEE
Q 018088 292 NCTMMAVGL 300 (361)
Q Consensus 292 ~aG~~~v~V 300 (361)
+.|+.++.+
T Consensus 132 ~~G~~aiIv 140 (223)
T TIGR00290 132 EEKFEARII 140 (223)
T ss_pred HcCCeEEEE
Confidence 899988765
No 298
>PRK12570 N-acetylmuramic acid-6-phosphate etherase; Reviewed
Probab=33.93 E-value=4.1e+02 Score=25.11 Aligned_cols=58 Identities=16% Similarity=0.053 Sum_probs=38.9
Q ss_pred hHHHHHHHHHcCCCCCcEEEE----cCChH---HHHHHHHcCCeEEEEeCCCCcccccCcceEeC
Q 018088 260 AHRFLSAAVKLDRKPSKCVVF----EDDPR---AITAAHNCTMMAVGLIGAHRAYDLVQADLAVA 317 (361)
Q Consensus 260 P~~~~~~~~klgi~p~~~v~I----GDs~~---Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~ 317 (361)
++.+..-+...++.+.+++++ |.++. -++.|+..|+.+|++++.....-...+|+.+.
T Consensus 113 ~~~~~~~l~a~~l~~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~s~La~~aD~~I~ 177 (296)
T PRK12570 113 PELGAQDLKAIGLTADDVVVGIAASGRTPYVIGALEYAKQIGATTIALSCNPDSPIAKIADIAIS 177 (296)
T ss_pred HHHHHHHHHHcCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhHHhCCEEEe
Confidence 567777777788888887644 23332 37888899999999976544333344666554
No 299
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=33.71 E-value=78 Score=31.30 Aligned_cols=83 Identities=14% Similarity=0.205 Sum_probs=63.5
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
.-.|++..++..+.+- +++++.|.....+...+++.++-.+.|...+..+.+-..-+. |.+=+.+.+.+-.+++.|..
T Consensus 252 ~kRp~l~~fl~~ls~~-~~l~~ft~s~~~y~~~v~d~l~~~k~~~~~lfr~sc~~~~G~-~ikDis~i~r~l~~viiId~ 329 (390)
T COG5190 252 SKRPELDYFLGKLSKI-HELVYFTASVKRYADPVLDILDSDKVFSHRLFRESCVSYLGV-YIKDISKIGRSLDKVIIIDN 329 (390)
T ss_pred cCChHHHHHHhhhhhh-EEEEEEecchhhhcchHHHhccccceeehhhhcccceeccCc-hhhhHHhhccCCCceEEeeC
Confidence 3489999999999888 999999999999999988888777766655544443333333 55566678888999999999
Q ss_pred ChHHH
Q 018088 283 DPRAI 287 (361)
Q Consensus 283 s~~Di 287 (361)
++.-.
T Consensus 330 ~p~SY 334 (390)
T COG5190 330 SPASY 334 (390)
T ss_pred Chhhh
Confidence 99844
No 300
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=33.31 E-value=77 Score=28.49 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=26.6
Q ss_pred CCcc-HHHHHHHHhhCCCcEEEEeCCC--HHHHHHHHH
Q 018088 204 PMEG-LQEWLDAVSSARIPCAVVSGLD--RRKMVEALE 238 (361)
Q Consensus 204 ~~pg-v~elL~~L~~~Gi~vaivSn~~--~~~~~~~L~ 238 (361)
+.++ +.++++.+++.|+.+++.||+. ......++.
T Consensus 51 lq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~ 88 (213)
T PRK10076 51 MQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAK 88 (213)
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHH
Confidence 4666 6899999999999999999984 344444444
No 301
>PRK15482 transcriptional regulator MurR; Provisional
Probab=33.29 E-value=4e+02 Score=24.69 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=50.8
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHH----HHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE-
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKM----VEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV- 279 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~----~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~- 279 (361)
...+.++.+.+.+.+ ++.++..+....+ ...+.++|.. +....+ ++.....+. .+.++++++
T Consensus 122 ~~~l~~~~~~i~~A~-~I~i~G~G~S~~~A~~l~~~l~~~g~~-----~~~~~d-----~~~~~~~~~--~~~~~Dv~i~ 188 (285)
T PRK15482 122 YARLQKIIEVISKAP-FIQITGLGGSALVGRDLSFKLMKIGYR-----VACEAD-----THVQATVSQ--ALKKGDVQIA 188 (285)
T ss_pred HHHHHHHHHHHHhCC-eeEEEEeChhHHHHHHHHHHHHhCCCe-----eEEecc-----HhHHHHHHh--cCCCCCEEEE
Confidence 345666777777775 4555544332222 2233334431 111111 122222222 456777654
Q ss_pred EcCC---h---HHHHHHHHcCCeEEEEeCCCCcccccCcceEe
Q 018088 280 FEDD---P---RAITAAHNCTMMAVGLIGAHRAYDLVQADLAV 316 (361)
Q Consensus 280 IGDs---~---~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi 316 (361)
|.-+ . .=+..|+..|+.+|++++.....-...+|+++
T Consensus 189 iS~sg~t~~~~~~~~~a~~~g~~iI~IT~~~~s~la~~ad~~l 231 (285)
T PRK15482 189 ISYSGSKKEIVLCAEAARKQGATVIAITSLADSPLRRLAHFTL 231 (285)
T ss_pred EeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhCCEEE
Confidence 4322 2 23667778899999997765554445566664
No 302
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=33.25 E-value=2.5e+02 Score=29.06 Aligned_cols=86 Identities=15% Similarity=0.031 Sum_probs=50.3
Q ss_pred cHHHHHHHHhhCCCcEEEEeCCC-HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChH
Q 018088 207 GLQEWLDAVSSARIPCAVVSGLD-RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPR 285 (361)
Q Consensus 207 gv~elL~~L~~~Gi~vaivSn~~-~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~ 285 (361)
++...|...+..+-++++++-.. ...+..+-+.+++.-..-.+.+.+ .......-+++.|+ -++|||...
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~i~~~~~~~~~-----e~~~~~~~l~~~G~----~~viG~~~~ 155 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLDIVQRSYVTEE-----DARSCVNDLRARGI----GAVVGAGLI 155 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceEEEEecCHH-----HHHHHHHHHHHCCC----CEEECChHH
Confidence 34555555666677899998643 344555555556531111111111 12233334444565 467899976
Q ss_pred HHHHHHHcCCeEEEEeC
Q 018088 286 AITAAHNCTMMAVGLIG 302 (361)
Q Consensus 286 Di~aA~~aG~~~v~V~g 302 (361)
...|+.+|+..|.+..
T Consensus 156 -~~~A~~~gl~~ili~s 171 (526)
T TIGR02329 156 -TDLAEQAGLHGVFLYS 171 (526)
T ss_pred -HHHHHHcCCceEEEec
Confidence 7899999999998854
No 303
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=33.24 E-value=24 Score=30.30 Aligned_cols=16 Identities=31% Similarity=0.382 Sum_probs=14.0
Q ss_pred CceEEEEece-eccccH
Q 018088 118 EAYGLIFSWD-VVADTR 133 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~ 133 (361)
.+|++|||+| ||.|..
T Consensus 7 ~IkLli~DVDGvLTDG~ 23 (170)
T COG1778 7 NIKLLILDVDGVLTDGK 23 (170)
T ss_pred hceEEEEeccceeecCe
Confidence 4899999999 999854
No 304
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=33.23 E-value=48 Score=32.23 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=21.8
Q ss_pred CCCceEEEEece-eccccHH-----HHHHHHHHHH-HHhCCC
Q 018088 116 PDEAYGLIFSWD-VVADTRA-----LKLNAWKQLA-FEEGKE 150 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~~-----~~~~a~~~~l-~~~G~~ 150 (361)
-+.+++|-|||| ||+.-.. ..++...+.+ +.+|.+
T Consensus 9 l~~i~~~GFDmDyTLa~Y~~~~~e~L~y~~~~~~LV~~~gYp 50 (343)
T TIGR02244 9 LEKIQVFGFDMDYTLAQYKSPELEALIYDLAKERLVKRFGYP 50 (343)
T ss_pred cccCCEEEECccccccccChHHHHHHHHHHHHHHHHHhcCCC
Confidence 456999999999 9986432 3444333333 334655
No 305
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=33.12 E-value=3.3e+02 Score=24.28 Aligned_cols=85 Identities=14% Similarity=0.230 Sum_probs=57.7
Q ss_pred ccHHHHHHH-HhhCCCcEEEEeCCC----HHHHHHHHHhCCCCcccceeEecCC------CCCCChHHHHHHHHHcCCCC
Q 018088 206 EGLQEWLDA-VSSARIPCAVVSGLD----RRKMVEALERMGLLKYFQAIVSEED------GMESMAHRFLSAAVKLDRKP 274 (361)
Q Consensus 206 pgv~elL~~-L~~~Gi~vaivSn~~----~~~~~~~L~~lgl~~~Fd~iv~~e~------~~~~KP~~~~~~~~klgi~p 274 (361)
..+.++.+. .++...-++++|+.. ...+..+++.-||. ||.++--.. .+.-|-..+..+++.+. ..
T Consensus 57 e~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s~~L~--Fd~v~LKp~~~~~~sTm~fK~~~l~~ll~~Y~-~~ 133 (197)
T PF10307_consen 57 ENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLASKGLE--FDAVCLKPENQRFSSTMDFKQAFLEDLLHTYK-NA 133 (197)
T ss_pred HHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhcCCCC--ccEEEeCcccccCccccHHHHHHHHHHHHhcC-CC
Confidence 334444433 445566778889854 45566666666875 887765443 11225567888888888 78
Q ss_pred CcEEEEcCChHHHHHHHHc
Q 018088 275 SKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~a 293 (361)
+++-+.+|.+.-+.+.+..
T Consensus 134 ~eI~IYeDR~~hvk~Fr~F 152 (197)
T PF10307_consen 134 EEIRIYEDRPKHVKGFRDF 152 (197)
T ss_pred CEEEEEcCCHHHHHHHHHH
Confidence 9999999999988887763
No 306
>COG3785 Uncharacterized conserved protein [Function unknown]
Probab=33.06 E-value=24 Score=27.93 Aligned_cols=24 Identities=25% Similarity=0.348 Sum_probs=18.0
Q ss_pred HHHhhhcCCCCceEEEEece-eccccH
Q 018088 108 KRIRYAMKPDEAYGLIFSWD-VVADTR 133 (361)
Q Consensus 108 ~rir~~m~~~~~k~VIFDlD-TL~ds~ 133 (361)
|..|+.+- ++++|+||+| ....++
T Consensus 19 QvVRHrlf--pfrGVV~DvDPeyante 43 (116)
T COG3785 19 QVVRHRLF--PFRGVVFDVDPEYANTE 43 (116)
T ss_pred hhhhhhhc--ccceEEEecCcccccCc
Confidence 33455443 4899999999 998888
No 307
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=32.96 E-value=25 Score=29.95 Aligned_cols=15 Identities=20% Similarity=0.346 Sum_probs=13.2
Q ss_pred ceEEEEece-eccccH
Q 018088 119 AYGLIFSWD-VVADTR 133 (361)
Q Consensus 119 ~k~VIFDlD-TL~ds~ 133 (361)
...+++|+| ||+++.
T Consensus 6 kl~LVLDLDeTLihs~ 21 (156)
T TIGR02250 6 KLHLVLDLDQTLIHTT 21 (156)
T ss_pred ceEEEEeCCCCccccc
Confidence 468999999 999987
No 308
>PRK14129 heat shock protein HspQ; Provisional
Probab=32.77 E-value=32 Score=27.23 Aligned_cols=17 Identities=12% Similarity=0.049 Sum_probs=14.1
Q ss_pred CCceEEEEece-eccccH
Q 018088 117 DEAYGLIFSWD-VVADTR 133 (361)
Q Consensus 117 ~~~k~VIFDlD-TL~ds~ 133 (361)
..+++||||+| +.-.++
T Consensus 17 ~~yrGVV~DVDP~fs~~e 34 (105)
T PRK14129 17 LGYLGVVVDIDPEYSLEE 34 (105)
T ss_pred cCCCeEEEeeCCCcCCCc
Confidence 35899999999 887666
No 309
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=32.18 E-value=1.5e+02 Score=28.14 Aligned_cols=25 Identities=12% Similarity=0.081 Sum_probs=22.1
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLD 229 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~ 229 (361)
-||+..+-..|+..|.++.++|...
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~ 86 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDER 86 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHH
Confidence 5789999999999999999999853
No 310
>PF03603 DNA_III_psi: DNA polymerase III psi subunit; InterPro: IPR004615 DNA-directed DNA polymerase (2.7.7.7 from EC) catalyzes DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The enzyme also has 3' to 5' exonuclease activity. It has a core composed of alpha, epsilon and theta chains, that associate with a tau subunit which allows the core dimerization to form the PolIII' complex. PolIII' associates with the gamma complex (gamma, delta, delta', psi and chi chains) and with the beta chain. This family is the psi subunit, the small subunit of the DNA polymerase III holoenzyme in Escherichia coli and related species, whose exact function is not known. It appears to have a narrow taxonomic distribution, being restricted to the gammaproteobacteria.; GO: 0003887 DNA-directed DNA polymerase activity, 0008408 3'-5' exonuclease activity, 0006260 DNA replication; PDB: 1EM8_B 3GLI_O 3SXU_B.
Probab=31.26 E-value=1.3e+02 Score=24.84 Aligned_cols=105 Identities=10% Similarity=0.051 Sum_probs=47.3
Q ss_pred HHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 214 AVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 214 ~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
.|.+-||....+.....-.. -...-+......++.+++.+...-..|..+++.+++++++|..+.=.. +.+...-
T Consensus 8 ~LqeMGItqW~Lr~P~~L~g---~~~i~lp~~~rLliVs~~~p~~~~~L~~dVLrsl~L~~~q~~~ltpeq--~~~L~~~ 82 (128)
T PF03603_consen 8 LLQEMGITQWQLRRPEVLQG---EIAISLPESCRLLIVSDELPQLDDPLFQDVLRSLKLTPEQVLHLTPEQ--LAMLPED 82 (128)
T ss_dssp HHHHCT--EEEES-GGGTS-----S-----TT--EEEE-SS---TTSHHHHHHHHHTT--GGGEEEE-CCG--GGGS-TT
T ss_pred HHHHcCCCeEEeCCccccCC---CccccCcccceEEEEeCCCCCccChHHHHHHHHcCCCHHHhhccCHHH--HhhCcCC
Confidence 35566666666665411111 111223334455666666555532299999999999999999886433 3333333
Q ss_pred CCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 294 TMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 294 G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
+..-+|..|........+.-+.-..+.+|.
T Consensus 83 ~~~~~W~lg~~~~~~~~~~~l~Sp~L~~L~ 112 (128)
T PF03603_consen 83 HPCWCWFLGCEQQEILAGKQLQSPSLSELD 112 (128)
T ss_dssp -B-EEEEES--S--SSBS-EEEE--HHHHH
T ss_pred CCCcEEEccCCCcccccceeecCcCHHHHh
Confidence 344566666655555566667778888874
No 311
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=30.64 E-value=44 Score=33.76 Aligned_cols=36 Identities=17% Similarity=0.089 Sum_probs=18.8
Q ss_pred CCCceEEEEece-eccccH-----HHHHHHHHHHH-HHhCCCC
Q 018088 116 PDEAYGLIFSWD-VVADTR-----ALKLNAWKQLA-FEEGKEI 151 (361)
Q Consensus 116 ~~~~k~VIFDlD-TL~ds~-----~~~~~a~~~~l-~~~G~~~ 151 (361)
-+.+++|-|||| ||+.-. ...++...+.+ ++.|.|.
T Consensus 9 l~~i~~iGFDmDyTLa~Y~~~~~~~L~y~~~~~~LV~~~gYP~ 51 (448)
T PF05761_consen 9 LKDIDVIGFDMDYTLARYKSPELEELIYELARERLVEEKGYPE 51 (448)
T ss_dssp CCC--EEEE-TBTTTBEE-CCHHHHHHHHHHHHHHHHHTT--G
T ss_pred cccCCEEEECcccchhhcCHHHHHHHHHHHHHHHHHhccCCCH
Confidence 456899999999 998643 33444444444 3367664
No 312
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II. This oxidoreductase of the 2-nitropropane dioxygenase family (pfam03060) is commonly found in apparent operons with genes involved in fatty acid biosynthesis. Furthermore, this genomic context generally includes the fabG 3-oxoacyl-[ACP] reductase and lacks the fabI enoyl-[ACP] reductase.
Probab=30.49 E-value=4.8e+02 Score=24.78 Aligned_cols=82 Identities=13% Similarity=0.169 Sum_probs=49.7
Q ss_pred HHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEe-cCC-CCC-CC---hHHHHHHHHHcCCCCCcEEEEcC-
Q 018088 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVS-EED-GME-SM---AHRFLSAAVKLDRKPSKCVVFED- 282 (361)
Q Consensus 210 elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~-~e~-~~~-~K---P~~~~~~~~klgi~p~~~v~IGD- 282 (361)
++++.+++.|+++...-. ..+.. ..+...|. |.++. +-+ .+. +. -..+..+.+..+++ +|+-|+
T Consensus 100 ~~i~~lk~~g~~v~~~v~-s~~~a-~~a~~~Ga----D~Ivv~g~eagGh~g~~~~~~ll~~v~~~~~iP---viaaGGI 170 (307)
T TIGR03151 100 KYIPRLKENGVKVIPVVA-SVALA-KRMEKAGA----DAVIAEGMESGGHIGELTTMALVPQVVDAVSIP---VIAAGGI 170 (307)
T ss_pred HHHHHHHHcCCEEEEEcC-CHHHH-HHHHHcCC----CEEEEECcccCCCCCCCcHHHHHHHHHHHhCCC---EEEECCC
Confidence 588888988877654322 22333 34445565 44442 222 111 11 24566677766653 888887
Q ss_pred -ChHHHHHHHHcCCeEEEE
Q 018088 283 -DPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 283 -s~~Di~aA~~aG~~~v~V 300 (361)
+..|+..+-..|...|++
T Consensus 171 ~~~~~~~~al~~GA~gV~i 189 (307)
T TIGR03151 171 ADGRGMAAAFALGAEAVQM 189 (307)
T ss_pred CCHHHHHHHHHcCCCEeec
Confidence 446888888899998877
No 313
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=30.38 E-value=22 Score=30.34 Aligned_cols=14 Identities=21% Similarity=0.273 Sum_probs=10.1
Q ss_pred eEEEEece-eccccH
Q 018088 120 YGLIFSWD-VVADTR 133 (361)
Q Consensus 120 k~VIFDlD-TL~ds~ 133 (361)
|.++||+| ||+.+.
T Consensus 1 Kia~fD~DgTLi~~~ 15 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTK 15 (159)
T ss_dssp SEEEE-SCTTTEE-S
T ss_pred CEEEEeCCCCccCCC
Confidence 57899999 999764
No 314
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=29.79 E-value=2.6e+02 Score=28.96 Aligned_cols=85 Identities=15% Similarity=0.056 Sum_probs=50.5
Q ss_pred cHHHHHHHHhhCCCcEEEEeCCC-HHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChH
Q 018088 207 GLQEWLDAVSSARIPCAVVSGLD-RRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPR 285 (361)
Q Consensus 207 gv~elL~~L~~~Gi~vaivSn~~-~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~ 285 (361)
++...|...++.+-++++++-.. ...+..+-+.+++.-..-.+.+.++ ......-+++.|+ -++|||+..
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~i~~~~~~~~~e-----~~~~v~~lk~~G~----~~vvG~~~~ 165 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLRIEQRSYVTEED-----ARGQINELKANGI----EAVVGAGLI 165 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCceEEEEecCHHH-----HHHHHHHHHHCCC----CEEEcCchH
Confidence 35555556666677899998643 3444445555565311111111111 2233344555665 367899877
Q ss_pred HHHHHHHcCCeEEEEe
Q 018088 286 AITAAHNCTMMAVGLI 301 (361)
Q Consensus 286 Di~aA~~aG~~~v~V~ 301 (361)
...|..+|+..+.+.
T Consensus 166 -~~~A~~~g~~g~~~~ 180 (538)
T PRK15424 166 -TDLAEEAGMTGIFIY 180 (538)
T ss_pred -HHHHHHhCCceEEec
Confidence 799999999999875
No 315
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=29.47 E-value=98 Score=26.06 Aligned_cols=26 Identities=19% Similarity=0.307 Sum_probs=22.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCH
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDR 230 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~ 230 (361)
.+.+.++++.+++.|+++.+.||...
T Consensus 74 ~~~l~~ll~~lk~~Gl~i~l~Tg~~~ 99 (147)
T TIGR02826 74 REALLSLLKIFKEKGLKTCLYTGLEP 99 (147)
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 46688999999999999999999754
No 316
>PRK05752 uroporphyrinogen-III synthase; Validated
Probab=29.10 E-value=3.4e+02 Score=24.67 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=16.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEE
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVV 225 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaiv 225 (361)
++.++..++.+.|++.|+.+..+
T Consensus 10 Rp~~~~~~l~~~l~~~G~~~~~~ 32 (255)
T PRK05752 10 RPAEECAALAASLAEAGIFSSSL 32 (255)
T ss_pred CcHHHHHHHHHHHHHcCCCEEEc
Confidence 56677777777788877776654
No 317
>smart00540 LEM in nuclear membrane-associated proteins. LEM, domain in nuclear membrane-associated proteins, including lamino-associated polypeptide 2 and emerin.
Probab=28.34 E-value=56 Score=21.66 Aligned_cols=32 Identities=13% Similarity=0.235 Sum_probs=26.7
Q ss_pred HHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhC
Q 018088 209 QEWLDAVSSARIPCAVVSGLDRRKMVEALERM 240 (361)
Q Consensus 209 ~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~l 240 (361)
.++.+.|++.|++.+-+|...+......|..+
T Consensus 9 ~eL~~~L~~~G~~~gPIt~sTR~vy~kkL~~~ 40 (44)
T smart00540 9 AELRAELKQYGLPPGPITDTTRKLYEKKLRKL 40 (44)
T ss_pred HHHHHHHHHcCCCCCCcCcchHHHHHHHHHHH
Confidence 36788899999999999998888888877654
No 318
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=28.04 E-value=2.1e+02 Score=26.30 Aligned_cols=81 Identities=14% Similarity=0.199 Sum_probs=48.2
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc-eeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCC-hH
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ-AIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDD-PR 285 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd-~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs-~~ 285 (361)
+.++++...++|++++++-+. ...++...+.+.-. | . .+++...+ .-.|+-...++++.+-...++|+||=+ +.
T Consensus 94 ~~~ll~~~~~~~~~v~llG~~-~~v~~~a~~~l~~~-y-~l~i~g~~~G-yf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 94 WEALMARAGKEGTPVFLVGGK-PEVLAQTEAKLRTQ-W-NVNIVGSQDG-YFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred HHHHHHHHHhcCCeEEEECCC-HHHHHHHHHHHHHH-h-CCEEEEEeCC-CCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 345667777788999999444 44444444443221 2 2 23333332 224655566778888888899999966 44
Q ss_pred -HHHHHHH
Q 018088 286 -AITAAHN 292 (361)
Q Consensus 286 -Di~aA~~ 292 (361)
..-+.++
T Consensus 170 QE~~~~~~ 177 (243)
T PRK03692 170 QEIFMRDC 177 (243)
T ss_pred HHHHHHHH
Confidence 6665554
No 319
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=27.40 E-value=2.5e+02 Score=24.00 Aligned_cols=82 Identities=11% Similarity=0.120 Sum_probs=44.0
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce-eEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCCh-H
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA-IVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDP-R 285 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~-iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~-~ 285 (361)
+.++++.+.+++.+++++-+. ...+....+.+.- .|... +++..+... +++--..+++..+-...++|+||=+. .
T Consensus 35 ~~~ll~~~~~~~~~v~llG~~-~~~~~~~~~~l~~-~yp~l~i~g~~~g~~-~~~~~~~i~~~I~~~~pdiv~vglG~Pk 111 (171)
T cd06533 35 MPALLELAAQKGLRVFLLGAK-PEVLEKAAERLRA-RYPGLKIVGYHHGYF-GPEEEEEIIERINASGADILFVGLGAPK 111 (171)
T ss_pred HHHHHHHHHHcCCeEEEECCC-HHHHHHHHHHHHH-HCCCcEEEEecCCCC-ChhhHHHHHHHHHHcCCCEEEEECCCCH
Confidence 557788888889999999554 3444443333311 12222 333223222 23322336666666667888888653 3
Q ss_pred -HHHHHHH
Q 018088 286 -AITAAHN 292 (361)
Q Consensus 286 -Di~aA~~ 292 (361)
..-+.++
T Consensus 112 QE~~~~~~ 119 (171)
T cd06533 112 QELWIARH 119 (171)
T ss_pred HHHHHHHH
Confidence 4444333
No 320
>PLN02580 trehalose-phosphatase
Probab=27.26 E-value=89 Score=30.89 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=33.0
Q ss_pred CCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCC
Q 018088 202 TEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMG 241 (361)
Q Consensus 202 ~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lg 241 (361)
..+.|++++.|+.|.+. .+++|||+.....+..++.-.+
T Consensus 140 A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L~~~l~~~~ 178 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKY-FPTAIISGRSRDKVYELVGLTE 178 (384)
T ss_pred ccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHHHHHhCCCC
Confidence 36788999999999988 6899999999999888876533
No 321
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=27.17 E-value=71 Score=31.64 Aligned_cols=226 Identities=19% Similarity=0.168 Sum_probs=114.1
Q ss_pred eccCCCCCCCCCCCcccccCccccccc-------cccccccc-cccccCCCCcccchhhhHHHHHHhHHHHHhhhcCCCC
Q 018088 47 RNACGFDENGSFNGFPITPNKLFMQEA-------IGAEYGEG-FETFRQDGPLKVDVDFLNDRLQEGFLKRIRYAMKPDE 118 (361)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~g~l~~dv~~~~~~~~~~~~~rir~~m~~~~ 118 (361)
=..||+..|.++--.=..++.+...|+ -|+.++.. ...|+| .|++.+...++.....+ + .
T Consensus 104 ~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-----nD~~~Le~~l~~~~~~~------~-~ 171 (388)
T COG0156 104 LFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-----NDLDHLEALLEEARENG------A-R 171 (388)
T ss_pred EEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-----CCHHHHHHHHHhhhccC------C-C
Confidence 356777755433222222334433333 46677766 566666 67777777666322111 1 2
Q ss_pred ceEEE----Eece-eccccHHHHHHHHHHHHHHhCCCCCchHHHHHHHhcCCHHHHHHHHHccCCChHHHHHHHHHHHHH
Q 018088 119 AYGLI----FSWD-VVADTRALKLNAWKQLAFEEGKEIPQEGDVLRQILNAGADHVLHKVLLWGKEESELDRLNSRLTQL 193 (361)
Q Consensus 119 ~k~VI----FDlD-TL~ds~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~~~~~l~~~~~~~ 193 (361)
.+.|+ |-|| ++.+-. .+.++.++|+.-.-.++...--+.|..-+-..+.. +....++.-+...+.+.
T Consensus 172 ~~~IvtegVfSMdGdiApL~-----~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~---g~~~~~vdi~~gTlsKA 243 (388)
T COG0156 172 RKLIVTEGVFSMDGDIAPLP-----ELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHF---GLEPEEVDIIVGTLGKA 243 (388)
T ss_pred ceEEEEeccccCCCCcCCHH-----HHHHHHHHhCcEEEEEccccccccCCCCccHHHHh---CCCCccceEEEEEchhh
Confidence 34554 5699 999887 77888999985443333222233343222233222 11111111011111111
Q ss_pred HHHhcccCCCCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCC----hHHHHHHHHH
Q 018088 194 YYDNLLSVTEPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESM----AHRFLSAAVK 269 (361)
Q Consensus 194 ~~~~l~~~~~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K----P~~~~~~~~k 269 (361)
+ ....-...|-..+.+.|+...-+...-|+.+...+...+..+.+..... ....+ ...+....+.
T Consensus 244 l----Gs~Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~-------~~r~~L~~~~~~~~~~~~~ 312 (388)
T COG0156 244 L----GSSGGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGP-------ERRERLQELAAFFRSLLKA 312 (388)
T ss_pred h----cccCceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCH-------HHHHHHHHHHHHHHHHHHh
Confidence 1 1222456777888888888765666666666666656666554432110 00111 2345545565
Q ss_pred cCCC--C----CcEEEEcCChHH---HHHHHHcCCeEEEEeCC
Q 018088 270 LDRK--P----SKCVVFEDDPRA---ITAAHNCTMMAVGLIGA 303 (361)
Q Consensus 270 lgi~--p----~~~v~IGDs~~D---i~aA~~aG~~~v~V~g~ 303 (361)
.++. + =..+++||...= ..+..+.|+.+.++..+
T Consensus 313 ~~~~~~~s~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~P 355 (388)
T COG0156 313 LGLVLLPSESPIIPVILGDEERALEASRALLEEGIYVSAIRPP 355 (388)
T ss_pred cCCccCCCCCCeeeeEeCCHHHHHHHHHHHHHCCeeEeeecCC
Confidence 5654 2 235799996543 33444458777776433
No 322
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=27.16 E-value=4.5e+02 Score=24.35 Aligned_cols=22 Identities=0% Similarity=0.013 Sum_probs=13.7
Q ss_pred ccHHHHHHHHhhCCCc-EEEEeC
Q 018088 206 EGLQEWLDAVSSARIP-CAVVSG 227 (361)
Q Consensus 206 pgv~elL~~L~~~Gi~-vaivSn 227 (361)
.+.....+.|.+.|++ ++++++
T Consensus 165 ~~~~~a~~~L~~~G~r~I~~i~~ 187 (328)
T PRK11303 165 DDAEMLAESLLKFPAESILLLGA 187 (328)
T ss_pred HHHHHHHHHHHHCCCCeEEEEeC
Confidence 3556667777777655 566654
No 323
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=26.16 E-value=2.2e+02 Score=28.17 Aligned_cols=89 Identities=13% Similarity=0.212 Sum_probs=55.5
Q ss_pred HHHHHHHHhhCC-Cc-EEEEeCCCH--HHHHHHHHhCCCC-cccceeEecCCCCCCChH-------HHHHHHHHcCCCCC
Q 018088 208 LQEWLDAVSSAR-IP-CAVVSGLDR--RKMVEALERMGLL-KYFQAIVSEEDGMESMAH-------RFLSAAVKLDRKPS 275 (361)
Q Consensus 208 v~elL~~L~~~G-i~-vaivSn~~~--~~~~~~L~~lgl~-~~Fd~iv~~e~~~~~KP~-------~~~~~~~klgi~p~ 275 (361)
+..+++++.+.+ +. ..|+|+..+ .+....++.+++. .-++.-+. .-...-.+ .+..+++ ...|+
T Consensus 19 mapli~~~~~~~~~~~~vi~TGQH~d~em~~~~le~~~i~~pdy~L~i~--~~~~tl~~~t~~~i~~~~~vl~--~~kPD 94 (383)
T COG0381 19 MAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVLELFGIRKPDYDLNIM--KPGQTLGEITGNIIEGLSKVLE--EEKPD 94 (383)
T ss_pred HhHHHHHHHhCCCCceEEEEecccccHHHHHHHHHHhCCCCCCcchhcc--ccCCCHHHHHHHHHHHHHHHHH--hhCCC
Confidence 345778888875 55 456688877 8999999999997 33333222 11111112 2333443 45799
Q ss_pred cEEEEcCChHHHH---HHHHcCCeEEEE
Q 018088 276 KCVVFEDDPRAIT---AAHNCTMMAVGL 300 (361)
Q Consensus 276 ~~v~IGDs~~Di~---aA~~aG~~~v~V 300 (361)
-+++-||+..=+. +|..-.+.+..|
T Consensus 95 ~VlVhGDT~t~lA~alaa~~~~IpV~Hv 122 (383)
T COG0381 95 LVLVHGDTNTTLAGALAAFYLKIPVGHV 122 (383)
T ss_pred EEEEeCCcchHHHHHHHHHHhCCceEEE
Confidence 9999999987544 444457777766
No 324
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=26.09 E-value=5.3e+02 Score=23.85 Aligned_cols=130 Identities=8% Similarity=0.008 Sum_probs=68.1
Q ss_pred HHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCC-ChHHHHHHHHHcCCCCCcEEEEcCChH---
Q 018088 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMES-MAHRFLSAAVKLDRKPSKCVVFEDDPR--- 285 (361)
Q Consensus 210 elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~-KP~~~~~~~~klgi~p~~~v~IGDs~~--- 285 (361)
.+-+.|++.|..+.++++.........++..|.. .+.-.+..... ..+-+...+++. .| + ++|=|+.+
T Consensus 22 ~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~----v~~~~~~~~~~~d~~~~~~~l~~~--~~-d-~vV~D~y~~~~ 93 (279)
T TIGR03590 22 TLARALHAQGAEVAFACKPLPGDLIDLLLSAGFP----VYELPDESSRYDDALELINLLEEE--KF-D-ILIVDHYGLDA 93 (279)
T ss_pred HHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCe----EEEecCCCchhhhHHHHHHHHHhc--CC-C-EEEEcCCCCCH
Confidence 4566777788899999887766666677766652 22222211111 122355555554 33 2 44445432
Q ss_pred -HHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhHHHHHHhhHh-----cCCCChhhHHhhhcccC
Q 018088 286 -AITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELSVINLRRLFA-----NKGSTFMERQKQIVEKV 349 (361)
Q Consensus 286 -Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~~~ll~~l~~-----~~~~~~~~l~~~~~~~~ 349 (361)
.....+..|...+.+.+.... ...+|+++...-.........+.. --|.+|.=|++++.+..
T Consensus 94 ~~~~~~k~~~~~l~~iDD~~~~--~~~~D~vin~~~~~~~~~y~~~~~~~~~~l~G~~Y~~lr~eF~~~~ 161 (279)
T TIGR03590 94 DWEKLIKEFGRKILVIDDLADR--PHDCDLLLDQNLGADASDYQGLVPANCRLLLGPSYALLREEFYQLA 161 (279)
T ss_pred HHHHHHHHhCCeEEEEecCCCC--CcCCCEEEeCCCCcCHhHhcccCcCCCeEEecchHHhhhHHHHHhh
Confidence 456666667777766543321 126788776543332222222111 11666777777765543
No 325
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=26.00 E-value=4.1e+02 Score=23.14 Aligned_cols=89 Identities=6% Similarity=-0.030 Sum_probs=42.2
Q ss_pred HHHHHHHHhhC--CCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChH
Q 018088 208 LQEWLDAVSSA--RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPR 285 (361)
Q Consensus 208 v~elL~~L~~~--Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~ 285 (361)
+..+++.|+++ ++++.+-|...+.. +...+.+ .+....++.. .--|......++++ .|+-+|+++-..+
T Consensus 37 ~~~Li~~l~~~~p~~~illT~~T~tg~-~~~~~~~--~~~v~~~~~P----~D~~~~~~rfl~~~--~P~~~i~~EtElW 107 (186)
T PF04413_consen 37 ARPLIKRLRKQRPDLRILLTTTTPTGR-EMARKLL--PDRVDVQYLP----LDFPWAVRRFLDHW--RPDLLIWVETELW 107 (186)
T ss_dssp HHHHHHHHTT---TS-EEEEES-CCHH-HHHHGG---GGG-SEEE-------SSHHHHHHHHHHH----SEEEEES----
T ss_pred HHHHHHHHHHhCCCCeEEEEecCCchH-HHHHHhC--CCCeEEEEeC----ccCHHHHHHHHHHh--CCCEEEEEccccC
Confidence 66788888876 78888877753222 1122222 1111222211 22366677777766 6888999998754
Q ss_pred --HHHHHHHcCCeEEEEeCCCC
Q 018088 286 --AITAAHNCTMMAVGLIGAHR 305 (361)
Q Consensus 286 --Di~aA~~aG~~~v~V~g~~~ 305 (361)
=+..|++.|++++.|++.-+
T Consensus 108 Pnll~~a~~~~ip~~LvNarls 129 (186)
T PF04413_consen 108 PNLLREAKRRGIPVVLVNARLS 129 (186)
T ss_dssp HHHHHH-----S-EEEEEE---
T ss_pred HHHHHHHhhcCCCEEEEeeeec
Confidence 58888999999999866543
No 326
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated
Probab=25.74 E-value=6.4e+02 Score=24.72 Aligned_cols=86 Identities=10% Similarity=0.074 Sum_probs=52.6
Q ss_pred cHHHHHHHHhhCCCcEEEEeC-CCHHHHHHHHHhCCCCcccceeEec----CCC--CCC-ChHHHHHHHHHcCCCCCcEE
Q 018088 207 GLQEWLDAVSSARIPCAVVSG-LDRRKMVEALERMGLLKYFQAIVSE----EDG--MES-MAHRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 207 gv~elL~~L~~~Gi~vaivSn-~~~~~~~~~L~~lgl~~~Fd~iv~~----e~~--~~~-KP~~~~~~~~klgi~p~~~v 278 (361)
-+.+.++.+++.++.+.+-.+ ......-..+...|. |.++.. +.. ... .|..+.+.+++.+++ ++
T Consensus 119 l~~~iv~~~~~~~V~v~vr~~~~~~~e~a~~l~eaGv----d~I~vhgrt~~~~h~~~~~~~~~i~~~ik~~~ip---VI 191 (368)
T PRK08649 119 LITERIAEIRDAGVIVAVSLSPQRAQELAPTVVEAGV----DLFVIQGTVVSAEHVSKEGEPLNLKEFIYELDVP---VI 191 (368)
T ss_pred HHHHHHHHHHhCeEEEEEecCCcCHHHHHHHHHHCCC----CEEEEeccchhhhccCCcCCHHHHHHHHHHCCCC---EE
Confidence 356788999988766655332 334455555556676 443331 221 122 467777788877653 33
Q ss_pred EEcC--ChHHHHHHHHcCCeEEEE
Q 018088 279 VFED--DPRAITAAHNCTMMAVGL 300 (361)
Q Consensus 279 ~IGD--s~~Di~aA~~aG~~~v~V 300 (361)
.|| +..+...+..+|+..|.|
T Consensus 192 -aG~V~t~e~A~~l~~aGAD~V~V 214 (368)
T PRK08649 192 -VGGCVTYTTALHLMRTGAAGVLV 214 (368)
T ss_pred -EeCCCCHHHHHHHHHcCCCEEEE
Confidence 366 445777777899999987
No 327
>smart00052 EAL Putative diguanylate phosphodiesterase. Putative diguanylate phosphodiesterase, present in a variety of bacteria.
Probab=25.53 E-value=2.9e+02 Score=24.15 Aligned_cols=84 Identities=11% Similarity=0.025 Sum_probs=51.1
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec-----CCCC-CCCh---HHHHHHHHHcCCCCCcEE
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE-----EDGM-ESMA---HRFLSAAVKLDRKPSKCV 278 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~-----e~~~-~~KP---~~~~~~~~klgi~p~~~v 278 (361)
+.+.++.|++.|+++++=--+........+..+.+ |.+--. .... ..+. ..+..+++.+|+ ++|
T Consensus 135 ~~~~i~~l~~~G~~ialddfg~~~~~~~~l~~l~~----d~iKld~~~~~~~~~~~~~~~~l~~l~~~~~~~~~---~vi 207 (241)
T smart00052 135 AVATLQRLRELGVRIALDDFGTGYSSLSYLKRLPV----DLLKIDKSFVRDLQTDPEDEAIVQSIIELAQKLGL---QVV 207 (241)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCcHHHHHHHHhCCC----CeEEECHHHHhhhccChhHHHHHHHHHHHHHHCCC---eEE
Confidence 44789999999999988643333334445555543 332211 1111 1122 244556666665 466
Q ss_pred EEc-CChHHHHHHHHcCCeEE
Q 018088 279 VFE-DDPRAITAAHNCTMMAV 298 (361)
Q Consensus 279 ~IG-Ds~~Di~aA~~aG~~~v 298 (361)
+=| ++..+...+++.|+..+
T Consensus 208 a~gVe~~~~~~~l~~~Gi~~~ 228 (241)
T smart00052 208 AEGVETPEQLDLLRSLGCDYG 228 (241)
T ss_pred EecCCCHHHHHHHHHcCCCEE
Confidence 666 78889999999999765
No 328
>cd05015 SIS_PGI_1 Phosphoglucose isomerase (PGI) contains two SIS (Sugar ISomerase) domains. This classification is based on the alignment of the first SIS domain. PGI is a multifunctional enzyme which as an intracellular dimer catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate. As an extracellular protein, PGI also has functions equivalent to neuroleukin (NLK), autocrine motility factor (AMF), and maturation factor (MF). Evidence suggests that PGI, NLK, AMF, and MF are closely related or identical. NLK is a neurotrophic growth factor that promotes regeneration and survival of neurons. The dimeric form of NLK has isomerase function, whereas its monomeric form carries out neurotrophic activity. AMF is a cytokine that stimulates cell migration and metastasis. MF mediates the differentiation of human myeloid leukemic HL-60 cells to terminal monocytic cells.
Probab=25.01 E-value=4.2e+02 Score=22.27 Aligned_cols=81 Identities=14% Similarity=0.085 Sum_probs=45.0
Q ss_pred CCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh----HHHHHHHHHcCC--CCCcEEEEcCChHHHHH-H
Q 018088 218 ARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA----HRFLSAAVKLDR--KPSKCVVFEDDPRAITA-A 290 (361)
Q Consensus 218 ~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP----~~~~~~~~klgi--~p~~~v~IGDs~~Di~a-A 290 (361)
.+.++.+++|.+...+...+..+...+-. .++.+..+.-..+ ..+..++++.+. ...++|+|-|...-+.. |
T Consensus 48 ~~~~i~~~~~~D~~~~~~~~~~~~~~~tl-vi~iSkSG~T~Et~~~~~~a~~~l~~~~~~~~~~~~vaiT~~~s~l~~~a 126 (158)
T cd05015 48 GGLRLHFVSNVDPDDLAELLKKLDPETTL-FIVISKSGTTLETLANARLAREWLEEAGGDDLAKHFVAITDNGSGLLKKA 126 (158)
T ss_pred CCceEEEEeCCCHHHHHHHHHhCCcccEE-EEEEECCcCCHHHHHHHHHHHHHHHHhccccccceEEEEcCCChHHHHHc
Confidence 46778889998888888888877543321 2333322211222 234444444443 56689999995544444 4
Q ss_pred HHcCCeEEE
Q 018088 291 HNCTMMAVG 299 (361)
Q Consensus 291 ~~aG~~~v~ 299 (361)
...+.....
T Consensus 127 ~~~~~~~~~ 135 (158)
T cd05015 127 GIEGLNTFE 135 (158)
T ss_pred CCCcceeee
Confidence 444444443
No 329
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=24.59 E-value=4.5e+02 Score=23.79 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=47.1
Q ss_pred HHhhCCCcEEEEe-CC-CHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHH
Q 018088 214 AVSSARIPCAVVS-GL-DRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAH 291 (361)
Q Consensus 214 ~L~~~Gi~vaivS-n~-~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~ 291 (361)
....-|+++..+. .+ ....++.+.+.+.-. -++.+++++..-..--.....+|+++|+.+--=+- +-....+...-
T Consensus 53 qA~algiPl~~~~~~~~~e~~~~~l~~~l~~~-gv~~vv~GdI~s~~qr~~~e~vc~~~gl~~~~PLW-~~d~~~l~e~i 130 (222)
T TIGR00289 53 VAEAVGIPLIKLYTSGEEEKEVEDLAGQLGEL-DVEALCIGAIESNYQKSRIDKVCRELGLKSIAPLW-HADPEKLMYEV 130 (222)
T ss_pred HHHHcCCCeEEEEcCCchhHHHHHHHHHHHHc-CCCEEEECccccHHHHHHHHHHHHHcCCEEecccc-CCCHHHHHHHH
Confidence 3445578865443 22 233444443333110 15788888764333345788899999986432222 33334444455
Q ss_pred HcCCeEEEE
Q 018088 292 NCTMMAVGL 300 (361)
Q Consensus 292 ~aG~~~v~V 300 (361)
..|+.++.+
T Consensus 131 ~~Gf~aiIv 139 (222)
T TIGR00289 131 AEKFEVIIV 139 (222)
T ss_pred HcCCeEEEE
Confidence 899998765
No 330
>TIGR03365 Bsubt_queE 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. This uncharacterized enzyme, designated QueE, participates in the biosynthesis, from GTP, of 7-cyano-7-deazaguanosine, also called preQ0 because in many species it is a precursor of queuosine. In most Archaea, it is instead the precursor of a different tRNA modified base, archaeosine.
Probab=24.54 E-value=72 Score=29.09 Aligned_cols=28 Identities=14% Similarity=-0.022 Sum_probs=24.6
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCCCHH
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGLDRR 231 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~~~~ 231 (361)
+.+++.++++.+++.|+++.+-||+...
T Consensus 85 l~~~l~~li~~l~~~g~~v~leTNGtl~ 112 (238)
T TIGR03365 85 LQKPLGELIDLGKAKGYRFALETQGSVW 112 (238)
T ss_pred hhHhHHHHHHHHHHCCCCEEEECCCCCc
Confidence 3688999999999999999999999643
No 331
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=24.27 E-value=1.3e+02 Score=29.21 Aligned_cols=95 Identities=14% Similarity=0.068 Sum_probs=53.1
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH--HHHHHHHHhCCCCcccceeEecCCCC-------CCChHHHH------HHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR--RKMVEALERMGLLKYFQAIVSEEDGM-------ESMAHRFL------SAA 267 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~--~~~~~~L~~lgl~~~Fd~iv~~e~~~-------~~KP~~~~------~~~ 267 (361)
.+.|++.++++.+++.|+.+.+.||+.. ......+...|+.. ..++-+... .+.+..|. ..+
T Consensus 74 ll~~~~~~il~~~~~~g~~~~i~TNG~ll~~~~~~~L~~~g~~~---v~iSldg~~~e~~d~irg~~g~f~~~~~~i~~l 150 (378)
T PRK05301 74 LLRKDLEELVAHARELGLYTNLITSGVGLTEARLAALKDAGLDH---IQLSFQDSDPELNDRLAGTKGAFAKKLAVARLV 150 (378)
T ss_pred CCchhHHHHHHHHHHcCCcEEEECCCccCCHHHHHHHHHcCCCE---EEEEecCCCHHHHHHHcCCCchHHHHHHHHHHH
Confidence 4589999999999999999999999852 22334455556532 222222110 11121121 234
Q ss_pred HHcCCCCC-cEEEEcCChHH----HHHHHHcCCeEEEE
Q 018088 268 VKLDRKPS-KCVVFEDDPRA----ITAAHNCTMMAVGL 300 (361)
Q Consensus 268 ~klgi~p~-~~v~IGDs~~D----i~aA~~aG~~~v~V 300 (361)
.+.|+... .+++-..+..+ +..++..|+..+.+
T Consensus 151 ~~~g~~v~i~~vv~~~N~~~i~~~~~~~~~lgv~~i~~ 188 (378)
T PRK05301 151 KAHGYPLTLNAVIHRHNIDQIPRIIELAVELGADRLEL 188 (378)
T ss_pred HHCCCceEEEEEeecCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44565422 23344455544 45677788887655
No 332
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=23.71 E-value=1.5e+02 Score=22.64 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=29.0
Q ss_pred HHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc
Q 018088 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247 (361)
Q Consensus 210 elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd 247 (361)
.+.+.++++|.++.++.-. ..+...++..|+.+.|.
T Consensus 62 ~~~~~~~~~g~~l~l~~~~--~~v~~~l~~~gl~~~~~ 97 (106)
T TIGR02886 62 GRYKKIKNEGGEVIVCNVS--PAVKRLFELSGLFKIIR 97 (106)
T ss_pred HHHHHHHHcCCEEEEEeCC--HHHHHHHHHhCCceEEE
Confidence 5567788899988888766 77889999999987773
No 333
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=23.65 E-value=2.1e+02 Score=27.46 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=56.8
Q ss_pred CCccHHHHHHHHhhCCCcEEEEeCC-CHHHHHHHHHhCCCCcccceeEecCCCCCC--ChHHHHHHHHHcCCC------C
Q 018088 204 PMEGLQEWLDAVSSARIPCAVVSGL-DRRKMVEALERMGLLKYFQAIVSEEDGMES--MAHRFLSAAVKLDRK------P 274 (361)
Q Consensus 204 ~~pgv~elL~~L~~~Gi~vaivSn~-~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~--KP~~~~~~~~klgi~------p 274 (361)
...|-.+|++.|++++ +-++.||. +...+-...+.+.+ ......++... +.+.|.+..+.-|+. |
T Consensus 272 yttgp~~li~llrqr~-RpylFSnslppavV~~a~ka~dl-----lm~s~~~i~~~~a~~qrfr~~me~aGftIsg~~hP 345 (417)
T KOG1359|consen 272 YTTGPKPLISLLRQRS-RPYLFSNSLPPAVVGMAAKAYDL-----LMVSSKEIQSRQANTQRFREFMEAAGFTISGASHP 345 (417)
T ss_pred CccCChhHHHHHHhcC-CceeecCCCChhhhhhhHHHHHH-----HHhhHHHHHHHHHHHHHHHHHHHhcCceecCCCCC
Confidence 3556678888898886 55666665 33333333333322 11222222222 245788888877764 4
Q ss_pred CcEEEEcCChHHHHHHHH---cCCeEEEEeC
Q 018088 275 SKCVVFEDDPRAITAAHN---CTMMAVGLIG 302 (361)
Q Consensus 275 ~~~v~IGDs~~Di~aA~~---aG~~~v~V~g 302 (361)
=--||+||..--..||.. -|+.++++..
T Consensus 346 I~pv~lGda~lA~~~ad~lLk~Gi~Vigfs~ 376 (417)
T KOG1359|consen 346 ICPVMLGDARLASKMADELLKRGIYVIGFSY 376 (417)
T ss_pred ccceecccHHHHHHHHHHHHhcCceEEeecC
Confidence 457899999888888876 4888887743
No 334
>PF04123 DUF373: Domain of unknown function (DUF373); InterPro: IPR007254 This archaeal family of unknown function is predicted to be an integral membrane protein with six transmembrane regions.
Probab=23.65 E-value=2.3e+02 Score=27.60 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=39.6
Q ss_pred HHHHHHhhCC--CcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCChHHH
Q 018088 210 EWLDAVSSAR--IPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDPRAI 287 (361)
Q Consensus 210 elL~~L~~~G--i~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~~Di 287 (361)
.+-++|++.| .+++++|+.....++.-++- .+-+..+++++ +|+.|++|.||+.|-
T Consensus 55 kiydeL~~~GedveVA~VsG~~~~~v~ad~~I--------------------~~qld~vl~~~--~~~~~i~VsDGaeDE 112 (344)
T PF04123_consen 55 KIYDELKAEGEDVEVAVVSGSPDVGVEADRKI--------------------AEQLDEVLSKF--DPDSAIVVSDGAEDE 112 (344)
T ss_pred HHHHHHHhcCCCeEEEEEECCCCCchhhHHHH--------------------HHHHHHHHHhC--CCCEEEEEecChhhh
Confidence 4445566655 77888888754333222211 12234455554 567999999999984
Q ss_pred HH--HHHcCCeEEEE
Q 018088 288 TA--AHNCTMMAVGL 300 (361)
Q Consensus 288 ~a--A~~aG~~~v~V 300 (361)
.. .-..-.+.++|
T Consensus 113 ~vlPiIqSr~~V~sV 127 (344)
T PF04123_consen 113 RVLPIIQSRVPVDSV 127 (344)
T ss_pred hhhHhhhccCceEEE
Confidence 43 33444455554
No 335
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=23.49 E-value=16 Score=34.06 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=64.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCC-CcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEc
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGL-LKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl-~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IG 281 (361)
.-.|++.++|....+. +.+++.|.+...+...++..+.- ...+..-+-.+.+. -++-.|.+-+..+|.+.+++++|+
T Consensus 131 ~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~-~~~g~yvKdls~~~~dL~~viIiD 208 (262)
T KOG1605|consen 131 RKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCT-LKDGNYVKDLSVLGRDLSKVIIVD 208 (262)
T ss_pred EcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceE-eECCcEEEEcceeccCcccEEEEc
Confidence 4489999999999888 89999999999999999998864 33333222221110 011112222256777889999999
Q ss_pred CChHHHHHHHHcCCeEE
Q 018088 282 DDPRAITAAHNCTMMAV 298 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v 298 (361)
|++.-..+=-+.|++.-
T Consensus 209 NsP~sy~~~p~NgIpI~ 225 (262)
T KOG1605|consen 209 NSPQSYRLQPENGIPIK 225 (262)
T ss_pred CChHHhccCccCCCccc
Confidence 99987777667777643
No 336
>PLN02334 ribulose-phosphate 3-epimerase
Probab=23.47 E-value=5.4e+02 Score=23.02 Aligned_cols=95 Identities=12% Similarity=0.026 Sum_probs=51.5
Q ss_pred ccHHHHHHHHhhCCCcEEEEeCC--CHHHHHHHHHhCCCCcccc--eeEecCCCCCCChHHHHHHHHHcCC-CCCcEEEE
Q 018088 206 EGLQEWLDAVSSARIPCAVVSGL--DRRKMVEALERMGLLKYFQ--AIVSEEDGMESMAHRFLSAAVKLDR-KPSKCVVF 280 (361)
Q Consensus 206 pgv~elL~~L~~~Gi~vaivSn~--~~~~~~~~L~~lgl~~~Fd--~iv~~e~~~~~KP~~~~~~~~klgi-~p~~~v~I 280 (361)
+...+.++.+++.|.++++..+. +.......++.-|+ +|+- .+..+.......|..+..+.+--.. ....++++
T Consensus 102 d~~~~~~~~i~~~g~~iGls~~~~t~~~~~~~~~~~~~~-Dyi~~~~v~pg~~~~~~~~~~~~~i~~~~~~~~~~~I~a~ 180 (229)
T PLN02334 102 IHLHRLIQQIKSAGMKAGVVLNPGTPVEAVEPVVEKGLV-DMVLVMSVEPGFGGQSFIPSMMDKVRALRKKYPELDIEVD 180 (229)
T ss_pred hhHHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHhccCC-CEEEEEEEecCCCccccCHHHHHHHHHHHHhCCCCcEEEe
Confidence 34567888899999999999873 33334433332113 3321 1221111112234444333221111 11246666
Q ss_pred c-CChHHHHHHHHcCCeEEEEe
Q 018088 281 E-DDPRAITAAHNCTMMAVGLI 301 (361)
Q Consensus 281 G-Ds~~Di~aA~~aG~~~v~V~ 301 (361)
| =+..++....++|...+.+.
T Consensus 181 GGI~~e~i~~l~~aGad~vvvg 202 (229)
T PLN02334 181 GGVGPSTIDKAAEAGANVIVAG 202 (229)
T ss_pred CCCCHHHHHHHHHcCCCEEEEC
Confidence 4 46778999999999988764
No 337
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=23.27 E-value=65 Score=31.70 Aligned_cols=37 Identities=19% Similarity=0.077 Sum_probs=27.0
Q ss_pred CcccchhhhHHHHHHhHHHHHhhhcCCCCceEEEEece-ecccc
Q 018088 90 PLKVDVDFLNDRLQEGFLKRIRYAMKPDEAYGLIFSWD-VVADT 132 (361)
Q Consensus 90 ~l~~dv~~~~~~~~~~~~~rir~~m~~~~~k~VIFDlD-TL~ds 132 (361)
|-=-||-.+-+..|...+.+ ...+++|-||=| ||++.
T Consensus 124 PSFNDvR~ILN~AQi~al~~------~~~L~LvTFDgDvTLY~D 161 (408)
T PF06437_consen 124 PSFNDVRHILNTAQIMALAK------NYGLKLVTFDGDVTLYED 161 (408)
T ss_pred CCHHHHHHHHHHHHHHHhcc------cCCceEEEEcCCcccccC
Confidence 44556667777777666644 336899999999 99974
No 338
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=22.85 E-value=47 Score=28.47 Aligned_cols=16 Identities=13% Similarity=0.219 Sum_probs=13.4
Q ss_pred CceEEEEece-eccccH
Q 018088 118 EAYGLIFSWD-VVADTR 133 (361)
Q Consensus 118 ~~k~VIFDlD-TL~ds~ 133 (361)
.+++|++|+| ||....
T Consensus 24 ~v~~vv~D~Dgtl~~~~ 40 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPD 40 (170)
T ss_pred CCCEEEEecCCccccCC
Confidence 4799999999 998644
No 339
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=22.84 E-value=2.4e+02 Score=26.08 Aligned_cols=85 Identities=12% Similarity=0.014 Sum_probs=53.8
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCC--------cc---ccee-EecCCCCCCChHHHHHHHHHcCCCCC
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLL--------KY---FQAI-VSEEDGMESMAHRFLSAAVKLDRKPS 275 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~--------~~---Fd~i-v~~e~~~~~KP~~~~~~~~klgi~p~ 275 (361)
..|-+.+|+..|.++.+||++.-..-.+.|..--+. +. .+.. -+...+..+--..|..+..++++...
T Consensus 37 IVEqV~~L~~~G~evilVSSGaVA~G~qrLr~~~~~s~s~r~~l~~~~~l~e~rA~AAvGQ~~Lmalye~lF~Qy~~~iA 116 (285)
T KOG1154|consen 37 IVEQVSELQRMGREVILVSSGAVAFGRQRLRQELLPSSSMRQTLKPQSELAEKRACAAVGQSGLMALYETLFTQYGITIA 116 (285)
T ss_pred HHHHHHHHHhcCceEEEEecchhhhhHHHhhhhhccchhHHHhhCCccchhhHHHHHHhCcchHHHHHHHHHHHhccchh
Confidence 456678899999999999998776666666543221 00 0000 00001111123478889999999999
Q ss_pred cEEEEcCChHHHHHHHH
Q 018088 276 KCVVFEDDPRAITAAHN 292 (361)
Q Consensus 276 ~~v~IGDs~~Di~aA~~ 292 (361)
|+++--.+..|-.--+|
T Consensus 117 QvLvT~~Di~d~~~r~N 133 (285)
T KOG1154|consen 117 QVLVTRNDILDEQQRKN 133 (285)
T ss_pred eeeecCcchhhHHHHHH
Confidence 99988777666554444
No 340
>PLN02151 trehalose-phosphatase
Probab=22.81 E-value=1.2e+02 Score=29.71 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=30.6
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHh
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALER 239 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~ 239 (361)
.+.|++++.|+.|.+ +.+++|+|+.....+...+.-
T Consensus 120 ~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~~~ 155 (354)
T PLN02151 120 FMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFVKL 155 (354)
T ss_pred cCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHcCC
Confidence 578899999999995 479999999998888887754
No 341
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E. This model describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.
Probab=22.69 E-value=1.6e+02 Score=28.45 Aligned_cols=41 Identities=15% Similarity=0.093 Sum_probs=30.0
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCH--HHHHHHHHhCCCC
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDR--RKMVEALERMGLL 243 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~--~~~~~~L~~lgl~ 243 (361)
.+.|++.++++.+++.|+.+.+.||+.. ......+...|+.
T Consensus 65 ll~~~~~~ii~~~~~~g~~~~l~TNG~ll~~e~~~~L~~~g~~ 107 (358)
T TIGR02109 65 LARPDLVELVAHARRLGLYTNLITSGVGLTEARLDALADAGLD 107 (358)
T ss_pred cccccHHHHHHHHHHcCCeEEEEeCCccCCHHHHHHHHhCCCC
Confidence 4589999999999999999999999852 2233334445653
No 342
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=22.64 E-value=4.1e+02 Score=23.04 Aligned_cols=81 Identities=15% Similarity=0.140 Sum_probs=44.7
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce-eEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCC-hH
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA-IVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDD-PR 285 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~-iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs-~~ 285 (361)
+.++++...++|++++++-+. ...+....+.+.- .|-.. +++. . +.-+|+--..+++..+-...++|+||=+ +.
T Consensus 37 ~~~l~~~~~~~~~~vfllG~~-~~v~~~~~~~l~~-~yP~l~i~g~-~-g~f~~~~~~~i~~~I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 37 MEELCQRAGKEKLPIFLYGGK-PDVLQQLKVKLIK-EYPKLKIVGA-F-GPLEPEERKAALAKIARSGAGIVFVGLGCPK 112 (177)
T ss_pred HHHHHHHHHHcCCeEEEECCC-HHHHHHHHHHHHH-HCCCCEEEEE-C-CCCChHHHHHHHHHHHHcCCCEEEEEcCCcH
Confidence 456777778888999999554 3444444443321 12111 2222 2 2224544445666666666789999865 44
Q ss_pred -HHHHHHH
Q 018088 286 -AITAAHN 292 (361)
Q Consensus 286 -Di~aA~~ 292 (361)
.+-+.+.
T Consensus 113 QE~~~~~~ 120 (177)
T TIGR00696 113 QEIWMRNH 120 (177)
T ss_pred hHHHHHHh
Confidence 5555544
No 343
>PRK02947 hypothetical protein; Provisional
Probab=22.43 E-value=4.9e+02 Score=23.73 Aligned_cols=42 Identities=10% Similarity=0.135 Sum_probs=27.6
Q ss_pred HHHHHHHcCCCCCcEEEEcC-C---hH---HHHHHHHcCCeEEEEeCCC
Q 018088 263 FLSAAVKLDRKPSKCVVFED-D---PR---AITAAHNCTMMAVGLIGAH 304 (361)
Q Consensus 263 ~~~~~~klgi~p~~~v~IGD-s---~~---Di~aA~~aG~~~v~V~g~~ 304 (361)
.........+.+++++++=. + .. =++.|+..|+.+|++++..
T Consensus 95 ~~~~~~~~~~~~~Dv~i~iS~sG~t~~~i~~~~~a~~~g~~vI~iT~~~ 143 (246)
T PRK02947 95 AKAILDRYDIRPGDVLIVVSNSGRNPVPIEMALEAKERGAKVIAVTSLA 143 (246)
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 34445567888888775532 2 22 2567788899999996653
No 344
>PRK11302 DNA-binding transcriptional regulator HexR; Provisional
Probab=22.17 E-value=6.1e+02 Score=23.19 Aligned_cols=98 Identities=10% Similarity=0.086 Sum_probs=50.4
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHH----HHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEE-
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVE----ALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVV- 279 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~----~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~- 279 (361)
.+.+.++.+.+.+.+ ++.++..+....+-. .+.++|+. .+... +..........+.++++++
T Consensus 115 ~~~i~~~~~~i~~a~-~I~i~G~G~S~~~a~~~~~~l~~~g~~----~~~~~--------~~~~~~~~~~~~~~~D~vI~ 181 (284)
T PRK11302 115 PSAINRAVDLLTQAK-KISFFGLGASAAVAHDAQNKFFRFNVP----VVYFD--------DIVMQRMSCMNSSDGDVVVL 181 (284)
T ss_pred HHHHHHHHHHHHcCC-eEEEEEcchHHHHHHHHHHHHHhcCCc----eEecC--------CHHHHHHHHHhCCCCCEEEE
Confidence 455677778887775 566666554333322 23334442 11111 1111112234556776654
Q ss_pred E---cCChH---HHHHHHHcCCeEEEEeCCCCcccccCcceEe
Q 018088 280 F---EDDPR---AITAAHNCTMMAVGLIGAHRAYDLVQADLAV 316 (361)
Q Consensus 280 I---GDs~~---Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi 316 (361)
| |-+.. =+..|+..|+.+|++++. .......+|+++
T Consensus 182 iS~sG~t~~~~~~~~~ak~~g~~vI~IT~~-~s~l~~~ad~~l 223 (284)
T PRK11302 182 ISHTGRTKSLVELAQLARENGATVIAITSA-GSPLAREATLAL 223 (284)
T ss_pred EeCCCCCHHHHHHHHHHHHcCCeEEEECCC-CChhHHhCCEEE
Confidence 4 44433 255667789999999763 333333466655
No 345
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=21.92 E-value=1.8e+02 Score=21.54 Aligned_cols=38 Identities=21% Similarity=0.124 Sum_probs=26.8
Q ss_pred HHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccc
Q 018088 208 LQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQ 247 (361)
Q Consensus 208 v~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd 247 (361)
+.++.+.++++|..+.++.-. ..+...++..|+.++|.
T Consensus 59 L~~l~~~~~~~g~~v~i~~~~--~~~~~~l~~~gl~~~~~ 96 (99)
T cd07043 59 LLGAYKRARAAGGRLVLVNVS--PAVRRVLELTGLDRLFP 96 (99)
T ss_pred HHHHHHHHHHcCCeEEEEcCC--HHHHHHHHHhCcceeee
Confidence 345667777888776666544 67888889888876653
No 346
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=21.83 E-value=4.2e+02 Score=21.19 Aligned_cols=85 Identities=14% Similarity=0.100 Sum_probs=48.4
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcCCh
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFEDDP 284 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGDs~ 284 (361)
.+...+.|+. |+.+.+............++. +|.++..... .-.++.+..+ .++.+ +...|-+.
T Consensus 8 ~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~------~d~ii~~~~~-~~~~~~l~~~-~~Lk~----I~~~~~G~ 71 (133)
T PF00389_consen 8 PDEEIERLEE----GFEVEFCDSPSEEELAERLKD------ADAIIVGSGT-PLTAEVLEAA-PNLKL----ISTAGAGV 71 (133)
T ss_dssp SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTT------ESEEEESTTS-TBSHHHHHHH-TT-SE----EEESSSSC
T ss_pred CHHHHHHHHC----CceEEEeCCCCHHHHHHHhCC------CeEEEEcCCC-CcCHHHHhcc-ceeEE----EEEccccc
Confidence 3444444444 677777776555555554443 5777776432 1124444433 44432 55666666
Q ss_pred H--HHHHHHHcCCeEEEEeCCCC
Q 018088 285 R--AITAAHNCTMMAVGLIGAHR 305 (361)
Q Consensus 285 ~--Di~aA~~aG~~~v~V~g~~~ 305 (361)
+ |+..|++.|+.+.-+.|.+.
T Consensus 72 d~id~~~a~~~gI~V~n~~g~~~ 94 (133)
T PF00389_consen 72 DNIDLEAAKERGIPVTNVPGYNA 94 (133)
T ss_dssp TTB-HHHHHHTTSEEEE-TTTTH
T ss_pred CcccHHHHhhCeEEEEEeCCcCC
Confidence 5 99999999999887655443
No 347
>PLN03017 trehalose-phosphatase
Probab=21.80 E-value=1.3e+02 Score=29.56 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=29.3
Q ss_pred CCCccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHH
Q 018088 203 EPMEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALE 238 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~ 238 (361)
.+.+++.+.|+.|. ++++++|+|+.....+..++.
T Consensus 133 ~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 133 FMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhc
Confidence 46778888999999 679999999999888887743
No 348
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=21.63 E-value=4.1e+02 Score=20.97 Aligned_cols=73 Identities=15% Similarity=0.191 Sum_probs=37.7
Q ss_pred HHHHHHHHhhC---CCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCcEEEEcC
Q 018088 208 LQEWLDAVSSA---RIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSKCVVFED 282 (361)
Q Consensus 208 v~elL~~L~~~---Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~~v~IGD 282 (361)
+.++|+.+.++ .+++.|+-++........+...........++.......++......+++.. ..+-+++++|
T Consensus 12 l~~~l~sl~~q~~~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~n~~~~~~--~~~~i~~~D~ 87 (180)
T cd06423 12 IERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRHA--KGDIVVVLDA 87 (180)
T ss_pred HHHHHHHHHhCCCCceEEEEEeCCCccchHHHHHHHhccccceEEEEEecccCCchHHHHHHHHhc--CCCEEEEECC
Confidence 44455555544 5788888887776666666655332211122222222344555555555544 3344555543
No 349
>TIGR02668 moaA_archaeal probable molybdenum cofactor biosynthesis protein A, archaeal. This model describes an archaeal family related, and predicted to be functionally equivalent, to molybdenum cofactor biosynthesis protein A (MoaA) of bacteria (see TIGR02666).
Probab=21.53 E-value=2.4e+02 Score=26.39 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=28.2
Q ss_pred CCCccHHHHHHHHhhCCC-cEEEEeCCCHH-HHHHHHHhCCC
Q 018088 203 EPMEGLQEWLDAVSSARI-PCAVVSGLDRR-KMVEALERMGL 242 (361)
Q Consensus 203 ~~~pgv~elL~~L~~~Gi-~vaivSn~~~~-~~~~~L~~lgl 242 (361)
.+.+++.++++.+++.|+ .+.+.||+... .....+...|+
T Consensus 68 ll~~~l~~iv~~l~~~g~~~v~i~TNG~ll~~~~~~l~~~g~ 109 (302)
T TIGR02668 68 LLRKDLIEIIRRIKDYGIKDVSMTTNGILLEKLAKKLKEAGL 109 (302)
T ss_pred ccccCHHHHHHHHHhCCCceEEEEcCchHHHHHHHHHHHCCC
Confidence 458889999999999998 89999998432 12223444555
No 350
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=21.49 E-value=1.6e+02 Score=22.45 Aligned_cols=38 Identities=18% Similarity=0.154 Sum_probs=28.1
Q ss_pred HHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccce
Q 018088 209 QEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQA 248 (361)
Q Consensus 209 ~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~ 248 (361)
.++.+.++++|..+.++.-. ..+...++..|+...|+.
T Consensus 65 ~~~~~~~~~~~~~~~l~~~~--~~~~~~l~~~~l~~~~~i 102 (108)
T TIGR00377 65 LGRYKQVRRVGGQLVLVSVS--PRVARLLDITGLLRIIPI 102 (108)
T ss_pred HHHHHHHHhcCCEEEEEeCC--HHHHHHHHHhChhheecc
Confidence 34566678888887777655 778888999998876653
No 351
>PRK11382 frlB fructoselysine-6-P-deglycase; Provisional
Probab=21.25 E-value=5.3e+02 Score=24.73 Aligned_cols=46 Identities=7% Similarity=0.102 Sum_probs=28.7
Q ss_pred CCCCc-EEEE---cCChH---HHHHHHHcCCeEEEEeCCCCcccccCcceEeC
Q 018088 272 RKPSK-CVVF---EDDPR---AITAAHNCTMMAVGLIGAHRAYDLVQADLAVA 317 (361)
Q Consensus 272 i~p~~-~v~I---GDs~~---Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~ 317 (361)
++++. +|.| |-+.. =++.|++.|..+|++++.....-...+|+++.
T Consensus 90 ~~~~~lvI~iS~SGeT~e~i~al~~ak~~Ga~~I~IT~~~~S~L~~~ad~~l~ 142 (340)
T PRK11382 90 LDDRCAVIGVSDYGKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSID 142 (340)
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHcCCeEEEEECCCCChHHHhCCEEEE
Confidence 45555 4555 54443 35666777999999976655444455776654
No 352
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=21.21 E-value=1.9e+02 Score=24.33 Aligned_cols=46 Identities=22% Similarity=0.342 Sum_probs=34.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEED 254 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~ 254 (361)
..++.++=+.|++.|+++.++.+.....+..+.+..++ +.|++..+
T Consensus 52 ~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~----~~V~~~~~ 97 (165)
T PF00875_consen 52 LESLADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGA----TAVYFNEE 97 (165)
T ss_dssp HHHHHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTE----SEEEEE--
T ss_pred HHHHHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCc----CeeEeccc
Confidence 44556777788999999999999988888888888886 56666655
No 353
>PF02593 dTMP_synthase: Thymidylate synthase; InterPro: IPR003745 This entry describes proteins of unknown function.
Probab=21.15 E-value=95 Score=28.11 Aligned_cols=95 Identities=11% Similarity=0.089 Sum_probs=63.3
Q ss_pred CCCccHH-HHHHHHhhCCCcEEEEeCCCHH-----HHHHHHHhCCCCcccceeEecCCCCCCChHHHHHHHHHcCCCCCc
Q 018088 203 EPMEGLQ-EWLDAVSSARIPCAVVSGLDRR-----KMVEALERMGLLKYFQAIVSEEDGMESMAHRFLSAAVKLDRKPSK 276 (361)
Q Consensus 203 ~~~pgv~-elL~~L~~~Gi~vaivSn~~~~-----~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP~~~~~~~~klgi~p~~ 276 (361)
.+.|++. ++...+++.|++..|+-..... .++..++.+|+.-.|...+|+-+- ..+| .+...++.+|.+-=+
T Consensus 59 ~lHPDl~~~l~~~~~e~g~kavIvp~~~~~~g~~~~lk~~~e~~gi~~~~P~~~CsL~~-~~~p-~i~~F~~~fGkP~~e 136 (217)
T PF02593_consen 59 GLHPDLTYELPEIAKEAGVKAVIVPSESPKPGLRRQLKKQLEEFGIEVEFPKPFCSLEE-NGNP-QIDEFAEYFGKPKVE 136 (217)
T ss_pred ccCchhHHHHHHHHHHcCCCEEEEecCCCccchHHHHHHHHHhcCceeecCccccccCC-CCCh-hHHHHHHHhCCceEE
Confidence 5678876 6677788899999999776555 889999999987777777776331 2233 455566668875444
Q ss_pred EEEEcCChHHHHHHHHcCCeEEE
Q 018088 277 CVVFEDDPRAITAAHNCTMMAVG 299 (361)
Q Consensus 277 ~v~IGDs~~Di~aA~~aG~~~v~ 299 (361)
+.+=+|...|+...+.|-+++.|
T Consensus 137 i~v~~~~I~~V~VlR~aPCGsT~ 159 (217)
T PF02593_consen 137 IEVENGKIKDVKVLRSAPCGSTW 159 (217)
T ss_pred EEecCCcEEEEEEEecCCCccHH
Confidence 44334444566666666555443
No 354
>PRK06100 DNA polymerase III subunit psi; Provisional
Probab=21.11 E-value=4.5e+02 Score=21.76 Aligned_cols=74 Identities=11% Similarity=0.078 Sum_probs=44.4
Q ss_pred eeEecCCCCCC-ChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHcCCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 248 AIVSEEDGMES-MAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNCTMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 248 ~iv~~e~~~~~-KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~aG~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
.++-+++.+.. .|-.|..+++.+++++++|..+- +..+.+.-.-+...+|..|..........-+.-..++||.
T Consensus 41 LliV~~~~p~~~~~~L~~dVLrsm~l~~~q~~~lt--~eq~~~L~~~~~~~~W~lg~~~~~~~~~~~L~Sp~L~eL~ 115 (132)
T PRK06100 41 LLLVAPQCPQNETALLFERILKSMQLELSQARHIE--PEQLSQLGYHSLEWVWFAGCDPLSLPAAKQLQSPLLSDID 115 (132)
T ss_pred EEEEcCCCCCccchHHHHHHHHHcCCCHHHeeeeC--HHHHhhCCcCCCCeEEECCCCccccccCcEEeCcCHHHHh
Confidence 44444443322 34488999999999999999884 3345555455555667655333333334455555666654
No 355
>COG1834 N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism]
Probab=20.86 E-value=4.5e+02 Score=24.61 Aligned_cols=70 Identities=7% Similarity=0.110 Sum_probs=44.1
Q ss_pred HHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCC----------CCC------hHHHHHHHHHcCC
Q 018088 209 QEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGM----------ESM------AHRFLSAAVKLDR 272 (361)
Q Consensus 209 ~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~----------~~K------P~~~~~~~~klgi 272 (361)
..+.+.+.++|+.|-++. ....+-|.+++.|.+- .+. ...+..+.+++|+
T Consensus 41 ~~lve~l~~~gv~V~ll~--------------~~~~~Pd~VFt~D~~~v~~~~avl~r~~~p~R~gE~~~~~~~~~~lgi 106 (267)
T COG1834 41 EALVEALEKNGVEVHLLP--------------PIEGLPDQVFTRDPGLVTGEGAVLARMGAPERRGEEEAIKETLESLGI 106 (267)
T ss_pred HHHHHHHHHCCCEEEEcC--------------cccCCCcceEeccceeEecccEEEeccCChhhccCHHHHHHHHHHcCC
Confidence 456777888899888887 2334444444443211 111 3478888888888
Q ss_pred CC-------------------CcEEEEcCChH-HHHHHHH
Q 018088 273 KP-------------------SKCVVFEDDPR-AITAAHN 292 (361)
Q Consensus 273 ~p-------------------~~~v~IGDs~~-Di~aA~~ 292 (361)
++ .++|+||.|.. +.+++..
T Consensus 107 ~i~~~~~~~~~eG~GD~l~~~~~~v~iG~s~RTn~egi~~ 146 (267)
T COG1834 107 PIYPRVEAGVFEGAGDVLMDGGDTVYIGYSFRTNLEGIEQ 146 (267)
T ss_pred cccccccCCCccccccEEEeCCcEEEEEeccccchHHHHH
Confidence 51 56778888865 6666554
No 356
>PRK08304 stage V sporulation protein AD; Validated
Probab=20.65 E-value=1.6e+02 Score=28.52 Aligned_cols=64 Identities=30% Similarity=0.252 Sum_probs=43.6
Q ss_pred CCCcccceeEecCCCCCC---Ch------HHHHHHHHHcCCCCCc--EEEEcCChH----HHHHHHHcCCeEEEEeCCC
Q 018088 241 GLLKYFQAIVSEEDGMES---MA------HRFLSAAVKLDRKPSK--CVVFEDDPR----AITAAHNCTMMAVGLIGAH 304 (361)
Q Consensus 241 gl~~~Fd~iv~~e~~~~~---KP------~~~~~~~~klgi~p~~--~v~IGDs~~----Di~aA~~aG~~~v~V~g~~ 304 (361)
.|.++||.++.-...... |. +....++++-|+++++ .+++||..+ -...++..|+.+..|.+..
T Consensus 33 pl~~~fd~~~~d~~~Ge~swEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q~~sAs~vA~~LGIPa~dV~gAC 111 (337)
T PRK08304 33 PLGKYFDKILDDDYCGEKSWEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQIISANFAARELGIPFLGLYGAC 111 (337)
T ss_pred CChhhCCeEecccccCCcCccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCcchHHHHHHHhCCcEEEEeccC
Confidence 467889988766544433 22 3677888888999884 788998753 2235677888877775543
No 357
>TIGR02765 crypto_DASH cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes.
Probab=20.60 E-value=2.8e+02 Score=27.56 Aligned_cols=65 Identities=14% Similarity=0.191 Sum_probs=45.5
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCCCCh---HHHHHHHHHcCCC
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGMESMA---HRFLSAAVKLDRK 273 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~~KP---~~~~~~~~klgi~ 273 (361)
..++.++=+.|++.|+++.+..+.....+..+++.+++ +.|++..+...... +.+...+.+.|+.
T Consensus 60 ~esL~~L~~~L~~~g~~L~v~~G~~~~vl~~L~~~~~~----~~V~~~~~~~~~~~~rd~~v~~~l~~~~i~ 127 (429)
T TIGR02765 60 LESLKDLRTSLRKLGSDLLVRSGKPEDVLPELIKELGV----RTVFLHQEVGSEEKSVERLLQQALARLGIH 127 (429)
T ss_pred HHHHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHHhCC----CEEEEeccCCHHHHHHHHHHHHHHHhcCce
Confidence 44566777788889999999999888888888888877 55666655332222 2455556666774
No 358
>TIGR02151 IPP_isom_2 isopentenyl-diphosphate delta-isomerase, type 2. Isopentenyl-diphosphate delta-isomerase (IPP isomerase) interconverts isopentenyl diphosphate and dimethylallyl diphosphate. This model represents the type 2 enzyme. FMN, NADPH, and Mg2+ are required by this form, which lacks homology to the type 1 enzyme (TIGR02150). IPP is precursor to many compounds, including enzyme cofactors, sterols, and isoprenoids.
Probab=20.27 E-value=3.3e+02 Score=26.21 Aligned_cols=66 Identities=12% Similarity=0.036 Sum_probs=40.5
Q ss_pred cEEEEcC--ChHHHHHHHHcCCeEEEEeCCCCcccc-cCcceEeCChhhhHHHHHHhhHhcCCCChhhH
Q 018088 276 KCVVFED--DPRAITAAHNCTMMAVGLIGAHRAYDL-VQADLAVANFNELSVINLRRLFANKGSTFMER 341 (361)
Q Consensus 276 ~~v~IGD--s~~Di~aA~~aG~~~v~V~g~~~~~~l-~~ad~vi~sl~EL~~~ll~~l~~~~~~~~~~l 341 (361)
.+++.|. +..|+.-+-.+|...|++.+..-..-. .+++.+..-++.+..-+...++..+-..--||
T Consensus 256 pVIasGGI~~~~di~kaLalGAd~V~igr~~L~~~~~~g~~~v~~~i~~~~~eL~~~m~~~G~~~i~el 324 (333)
T TIGR02151 256 PIIASGGLRTGLDVAKAIALGADAVGMARPFLKAALDEGEEAVIEEIELIIEELKVAMFLTGAKTIAEL 324 (333)
T ss_pred eEEEECCCCCHHHHHHHHHhCCCeehhhHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH
Confidence 4777776 455888888899998887443222111 45666666677766665555555554444444
No 359
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=20.19 E-value=1.6e+02 Score=26.88 Aligned_cols=43 Identities=19% Similarity=0.223 Sum_probs=30.1
Q ss_pred HHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecC
Q 018088 210 EWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEE 253 (361)
Q Consensus 210 elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e 253 (361)
++++...+.++.++++|+.....+..+++..++ ...|.+|++.
T Consensus 26 ~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l-~~Pd~~I~sv 68 (247)
T PF05116_consen 26 ELLEQQARPEILFVYVTGRSLESVLRLLREYNL-PQPDYIITSV 68 (247)
T ss_dssp HHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT--EE-SEEEETT
T ss_pred HHHHHhhCCCceEEEECCCCHHHHHHHHHhCCC-CCCCEEEecC
Confidence 344434566799999999999999999999887 3568888763
No 360
>PRK06856 DNA polymerase III subunit psi; Validated
Probab=20.17 E-value=4.8e+02 Score=21.43 Aligned_cols=103 Identities=13% Similarity=0.122 Sum_probs=55.4
Q ss_pred HhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEecCCCCC-CChHHHHHHHHHcCCCCCcEEEEcCChHHHHHHHHc
Q 018088 215 VSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSEEDGME-SMAHRFLSAAVKLDRKPSKCVVFEDDPRAITAAHNC 293 (361)
Q Consensus 215 L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~e~~~~-~KP~~~~~~~~klgi~p~~~v~IGDs~~Di~aA~~a 293 (361)
|++-||....+.+...-... ...-+..-..-++-+++.+. .-| .|..+++.+++++++|.++- +.-+.+...-
T Consensus 8 LqemGItqW~Lr~P~~L~g~---~~i~lp~~~rLliV~~~~~~~~~~-L~~dVLrsl~L~~~q~~~lt--~eq~~~L~~~ 81 (128)
T PRK06856 8 LQQLGITQWVLRRPGVLQGE---IAISLPEHIRLVIVAEELPALTDP-LLQDVLRSLTLSPDQVLCLT--PEQVAMLPQG 81 (128)
T ss_pred HHHcCCceEEecCccccCCC---ccccCCccceEEEEeCCCCcccCh-HHHHHHHHcCCCHHHeeeeC--HHHHhhCCCC
Confidence 55556666666654211111 11223333344555555443 345 89999999999999999874 3334444222
Q ss_pred CCeEEEEeCCCCcccccCcceEeCChhhhH
Q 018088 294 TMMAVGLIGAHRAYDLVQADLAVANFNELS 323 (361)
Q Consensus 294 G~~~v~V~g~~~~~~l~~ad~vi~sl~EL~ 323 (361)
.-..+|..|........++-+.-..++||.
T Consensus 82 ~~~~~W~lg~~~~~~~~~~~l~Sp~L~eL~ 111 (128)
T PRK06856 82 HRCNSWLLGTDEPLSLAGAQWQSPALTELK 111 (128)
T ss_pred CCceEEECCCcccccccCCeEeCcCHHHHh
Confidence 222236545443333345566666777764
No 361
>cd01948 EAL EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.
Probab=20.16 E-value=3.1e+02 Score=23.97 Aligned_cols=85 Identities=11% Similarity=-0.011 Sum_probs=52.1
Q ss_pred cHHHHHHHHhhCCCcEEEEeCCCHHHHHHHHHhCCCCcccceeEec-CC----CC-CCCh---HHHHHHHHHcCCCCCcE
Q 018088 207 GLQEWLDAVSSARIPCAVVSGLDRRKMVEALERMGLLKYFQAIVSE-ED----GM-ESMA---HRFLSAAVKLDRKPSKC 277 (361)
Q Consensus 207 gv~elL~~L~~~Gi~vaivSn~~~~~~~~~L~~lgl~~~Fd~iv~~-e~----~~-~~KP---~~~~~~~~klgi~p~~~ 277 (361)
.+.+.++.|++.|+++++---+........+..+.. |.+--. .. .. .... ..+...++.+|+ .+
T Consensus 133 ~~~~~~~~l~~~G~~l~ld~~g~~~~~~~~l~~~~~----d~iKld~~~~~~~~~~~~~~~~l~~l~~~~~~~~~---~v 205 (240)
T cd01948 133 EALATLRRLRALGVRIALDDFGTGYSSLSYLKRLPV----DYLKIDRSFVRDIETDPEDRAIVRAIIALAHSLGL---KV 205 (240)
T ss_pred HHHHHHHHHHHCCCeEEEeCCCCcHhhHHHHHhCCC----CEEEECHHHHHhHhcChhhHHHHHHHHHHHHHCCC---eE
Confidence 367889999999999998543322333344554443 332211 11 00 1122 244555666665 57
Q ss_pred EEEc-CChHHHHHHHHcCCeEE
Q 018088 278 VVFE-DDPRAITAAHNCTMMAV 298 (361)
Q Consensus 278 v~IG-Ds~~Di~aA~~aG~~~v 298 (361)
|+=| ++..+..+++..|+..+
T Consensus 206 ia~gVe~~~~~~~~~~~gi~~~ 227 (240)
T cd01948 206 VAEGVETEEQLELLRELGCDYV 227 (240)
T ss_pred EEEecCCHHHHHHHHHcCCCee
Confidence 7777 88999999999999765
No 362
>PF05550 Peptidase_C53: Pestivirus Npro endopeptidase C53; InterPro: IPR008751 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C53 (clan C-). The active site residues occur in the order E, H, C in the sequence which is unlike that in any other family. They are unique to pestiviruses. The N-terminal cysteine peptidase (Npro) encoded by the bovine viral diarrhoea virus genome is responsible for the self-cleavage that releases the N terminus of the core protein. This unique protease is dispensable for viral replication, and its coding region can be replaced by a ubiquitin gene directly fused in frame to the core [, , , ].; GO: 0016032 viral reproduction, 0019082 viral protein processing
Probab=20.08 E-value=81 Score=26.52 Aligned_cols=59 Identities=25% Similarity=0.416 Sum_probs=40.3
Q ss_pred CCC-Cccccccc--ccee--------eeccCCCC-CCCCCCCcccccCccccccccccccccccccccCCC
Q 018088 31 FFP-STLKLSKF--KRLV--------IRNACGFD-ENGSFNGFPITPNKLFMQEAIGAEYGEGFETFRQDG 89 (361)
Q Consensus 31 ~~~-~~~~~~~~--~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 89 (361)
-+| +.|++|+- .+.| -|--|-++ .+|.+.|.++.|.-+|-++--|--|-+-|+++.-..
T Consensus 39 iHpqsTLkLPH~RG~~ei~t~l~~LPkkGDCRsGN~~GpVSGIYikpGPv~YQDY~gpVYHRAPLElf~e~ 109 (168)
T PF05550_consen 39 IHPQSTLKLPHKRGRAEIPTTLRSLPKKGDCRSGNHRGPVSGIYIKPGPVFYQDYKGPVYHRAPLELFTET 109 (168)
T ss_pred ccccccccCccccCccccccchhhCCcCCcccCCCcCCCcceEEecCCceeeccCCCcccccchHHhhccc
Confidence 344 67888872 1111 23345555 789999999999999999999888855555554433
No 363
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=20.01 E-value=7.1e+02 Score=23.13 Aligned_cols=88 Identities=17% Similarity=0.057 Sum_probs=48.6
Q ss_pred CccHHHHHHHHhhCCCcEEEEeCCCH--HHHHHHHHhCCCCcccceeEecCCCCCCC-hHHHHHHHHHcCCCCCcEEEEc
Q 018088 205 MEGLQEWLDAVSSARIPCAVVSGLDR--RKMVEALERMGLLKYFQAIVSEEDGMESM-AHRFLSAAVKLDRKPSKCVVFE 281 (361)
Q Consensus 205 ~pgv~elL~~L~~~Gi~vaivSn~~~--~~~~~~L~~lgl~~~Fd~iv~~e~~~~~K-P~~~~~~~~klgi~p~~~v~IG 281 (361)
.+...++++.|.++|++++++-+++. .......+..+-. .+.+ ... ++ +..++++ .++++-.
T Consensus 197 ~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~-----~l~g----~~sL~e-l~ali~~-----a~l~I~~ 261 (319)
T TIGR02193 197 EERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGA-----VVLP----KMSLAE-VAALLAG-----ADAVVGV 261 (319)
T ss_pred HHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCC-----eecC----CCCHHH-HHHHHHc-----CCEEEeC
Confidence 44677888888777887776644432 2344444433211 1111 111 22 2222222 3455555
Q ss_pred CChHHHHHHHHcCCeEEEEeCCCCccc
Q 018088 282 DDPRAITAAHNCTMMAVGLIGAHRAYD 308 (361)
Q Consensus 282 Ds~~Di~aA~~aG~~~v~V~g~~~~~~ 308 (361)
||-. +.+|...|.+++++.|+..+..
T Consensus 262 DSgp-~HlAaa~g~P~i~lfg~t~p~~ 287 (319)
T TIGR02193 262 DTGL-THLAAALDKPTVTLYGATDPGR 287 (319)
T ss_pred CChH-HHHHHHcCCCEEEEECCCCHhh
Confidence 6654 7888899999999977665433
Done!