Your job contains 1 sequence.
>018092
MYPWPLVKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILY
RFCDGQECQTDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKEIRRHLDFPGRDK
YVVVAFSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEMIPCVPNALIALGHGCNSDQQQDG
MLLWLEEHGRRLHNGIIRLRDEENLKFINLFPEEPPLCSIAVTNGVKIRASAVFIPELAD
PESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHANNVVVSVVSGEAVIGM
YPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQRPDYI
F
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 018092
(361 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198826 - symbol:SKIP16 "SKP1/ASK-interacting ... 1122 9.4e-114 1
UNIPROTKB|A6H7H7 - symbol:FBXO3 "F-box only protein 3" sp... 147 1.6e-14 2
UNIPROTKB|Q9UK99 - symbol:FBXO3 "F-box only protein 3" sp... 147 1.6e-14 2
RGD|1593433 - symbol:Fbxo3 "F-box protein 3" species:1011... 146 2.3e-14 2
MGI|MGI:1929084 - symbol:Fbxo3 "F-box protein 3" species:... 146 1.5e-13 2
ZFIN|ZDB-GENE-050522-269 - symbol:fbxo3 "F-box protein 3"... 134 4.4e-13 2
UNIPROTKB|Q60C69 - symbol:apaG "Protein ApaG" species:243... 143 2.5e-09 1
DICTYBASE|DDB_G0282285 - symbol:DDB_G0282285 "ApaG domain... 149 2.2e-08 2
UNIPROTKB|Q8EB92 - symbol:apaG "Protein ApaG" species:211... 119 1.0e-06 1
TIGR_CMR|SO_3640 - symbol:SO_3640 "apaG protein" species:... 119 1.0e-06 1
UNIPROTKB|Q0BYU0 - symbol:apaG "ApaG protein" species:228... 114 3.6e-06 1
UNIPROTKB|Q9KUS3 - symbol:apaG "Protein ApaG" species:243... 109 1.3e-05 1
TIGR_CMR|VC_0442 - symbol:VC_0442 "apaG protein" species:... 109 1.3e-05 1
UNIPROTKB|Q2GIY5 - symbol:apaG "ApaG protein" species:212... 100 0.00012 1
TIGR_CMR|APH_1120 - symbol:APH_1120 "apaG protein" specie... 100 0.00012 1
UNIPROTKB|Q2GFG4 - symbol:apaG "Protein ApaG" species:205... 98 0.00020 1
TIGR_CMR|ECH_1033 - symbol:ECH_1033 "apaG protein" specie... 98 0.00020 1
UNIPROTKB|F1NNL9 - symbol:TSR1 "Uncharacterized protein" ... 114 0.00070 1
RGD|1307022 - symbol:Poldip2 "polymerase (DNA-directed), ... 114 0.00077 1
UNIPROTKB|A5D9H9 - symbol:POLDIP2 "Polymerase (DNA-direct... 114 0.00077 1
UNIPROTKB|E2QVV7 - symbol:POLDIP2 "Uncharacterized protei... 114 0.00077 1
UNIPROTKB|Q9Y2S7 - symbol:POLDIP2 "Polymerase delta-inter... 114 0.00077 1
MGI|MGI:1915061 - symbol:Poldip2 "polymerase (DNA-directe... 114 0.00077 1
UNIPROTKB|I3LMX3 - symbol:POLDIP2 "Uncharacterized protei... 114 0.00078 1
>TAIR|locus:2198826 [details] [associations]
symbol:SKIP16 "SKP1/ASK-interacting protein 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IPI] [GO:0019243 "methylglyoxal
catabolic process to D-lactate" evidence=RCA] PROSITE:PS50181
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0016567 EMBL:AC024174 GO:GO:0019005 HSSP:Q7VU61
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 KO:K10290 EMBL:AF419599
EMBL:AY099571 EMBL:BT002142 IPI:IPI00545043 PIR:D86196
RefSeq:NP_563759.1 UniGene:At.15468 ProteinModelPortal:Q9LND7
SMR:Q9LND7 IntAct:Q9LND7 STRING:Q9LND7 PaxDb:Q9LND7 PRIDE:Q9LND7
EnsemblPlants:AT1G06110.1 GeneID:837120 KEGG:ath:AT1G06110
TAIR:At1g06110 eggNOG:NOG296925 HOGENOM:HOG000243753
InParanoid:Q9LND7 OMA:VNVYLLP PhylomeDB:Q9LND7
ProtClustDB:CLSN2687703 Genevestigator:Q9LND7 Uniprot:Q9LND7
Length = 436
Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
Identities = 214/362 (59%), Positives = 260/362 (71%)
Query: 1 MYPWPLVKRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILY 60
MYPW LVKRV+ CWD LK WL NFPEAKATLRKG +E D+Q+ E SLKVKLP+PTR+LY
Sbjct: 80 MYPWNLVKRVRLCWDNLKQWLTLNFPEAKATLRKGVTEDDLQEFETSLKVKLPLPTRLLY 139
Query: 61 RFCDGQECQTDDFESIGAMGLIGGYSFYGHLVNVYLIPLSHIIMETKE-IRRHLDFPGRD 119
RF DGQE + + G++GLIGGYS Y H VNVYL+PL ++ ETKE R L F R
Sbjct: 140 RFVDGQELSSPNGLD-GSLGLIGGYSAYSHDVNVYLLPLKEVMRETKESFMRDLGFSSRL 198
Query: 120 KYVVVAFSSTYSEKFFFLNCTNGQLYVGTKNLLSDGEMIPCVPNALIALGHGCNSDQQQD 179
+V+A S S K F L+CT GQL+ GT N +++PCVP+AL+ H N DQQQD
Sbjct: 199 DLIVMAASVVASLKIFLLDCTTGQLFTGTSNR----QLLPCVPDALVRSVHDTNGDQQQD 254
Query: 180 GMLLWLEEHGRRLHNGIIRLRDEENLKFINLFPEEPPLCSIAVTNGVKIRASAVFIPELA 239
MLLWLEEHGRRL G I +R + N+K I+LFPE PPLCS++VTNGV++RAS+VFIPE++
Sbjct: 255 AMLLWLEEHGRRLQTGTINVRQQNNVKSISLFPEIPPLCSVSVTNGVQVRASSVFIPEIS 314
Query: 240 DPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIG 299
+ Y +AYSIRMSL+PEGC++NG SSCQL RHW+I A GEAVIG
Sbjct: 315 NLRDQPPAYWYAYSIRMSLMPEGCILNGTHHSSCQLYWRHWVIRADNEVIDNVNGEAVIG 374
Query: 300 MYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQRPDY 359
YPLL G+ EF Y+SC++ P + GS+ GSFTFVPG L DPKGS FEV V EFPL+ PDY
Sbjct: 375 KYPLLQAGEEEFVYESCSSFPTTAGSIDGSFTFVPGSLRDPKGSQFEVKVVEFPLELPDY 434
Query: 360 IF 361
IF
Sbjct: 435 IF 436
>UNIPROTKB|A6H7H7 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 GO:GO:0005634 SUPFAM:SSF81383
eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:BC146250 IPI:IPI00690261
RefSeq:NP_001092532.1 UniGene:Bt.91417 ProteinModelPortal:A6H7H7
Ensembl:ENSBTAT00000013287 GeneID:534287 KEGG:bta:534287 CTD:26273
GeneTree:ENSGT00390000009225 HOGENOM:HOG000232174
HOVERGEN:HBG005647 InParanoid:A6H7H7 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 NextBio:20876340 InterPro:IPR018958 SMART:SM00860
Uniprot:A6H7H7
Length = 469
Score = 147 (56.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 39/144 (27%), Positives = 62/144 (43%)
Query: 216 PLCSIAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQL 275
P C +A T + + S F+PEL+ Y F Y IR+ + + + +CQL
Sbjct: 275 PEC-VATTGDITVSVSTSFLPELSSVHPP--HYFFTYRIRIEMSKDA-----LPEKACQL 326
Query: 276 QRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPG 335
R+W I G V+G +P++ PG+ + Y SCT + G + G +TF
Sbjct: 327 DSRYWRITNAKGDVEEVQGPGVVGEFPIISPGR-VYEYTSCTTFSTTSGYMEGYYTF--- 382
Query: 336 RLADPKGSPFEVVVAEFPLQRPDY 359
K F V + F + P +
Sbjct: 383 HFLYFKDKIFNVAIPRFHMACPTF 406
Score = 110 (43.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ WD LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLV 155
Query: 70 TDDFESIGAMGLIGGY 85
+G+M L Y
Sbjct: 156 VPGL--LGSMALSNHY 169
>UNIPROTKB|Q9UK99 [details] [associations]
symbol:FBXO3 "F-box only protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0006508
"proteolysis" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016567 "protein ubiquitination" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
GO:GO:0005634 Reactome:REACT_6900 EMBL:CH471064 GO:GO:0006508
SUPFAM:SSF81383 GO:GO:0004842 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
CTD:26273 HOGENOM:HOG000232174 HOVERGEN:HBG005647 KO:K10290
OMA:DLGRYIQ OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860
EMBL:AK001943 EMBL:AK128454 EMBL:AL136625 EMBL:AC113192
EMBL:AL049629 EMBL:BC046110 EMBL:AF176702 IPI:IPI00296789
IPI:IPI00472624 IPI:IPI00969390 RefSeq:NP_036307.2
RefSeq:NP_208385.1 UniGene:Hs.406787 ProteinModelPortal:Q9UK99
SMR:Q9UK99 IntAct:Q9UK99 STRING:Q9UK99 PhosphoSite:Q9UK99
DMDM:145559474 PaxDb:Q9UK99 PRIDE:Q9UK99 DNASU:26273
Ensembl:ENST00000265651 Ensembl:ENST00000448981
Ensembl:ENST00000530401 GeneID:26273 KEGG:hsa:26273 UCSC:uc001muy.3
UCSC:uc001mva.1 UCSC:uc001mvb.1 GeneCards:GC11M033762
HGNC:HGNC:13582 MIM:609089 neXtProt:NX_Q9UK99 PharmGKB:PA28040
InParanoid:Q9UK99 PhylomeDB:Q9UK99 GenomeRNAi:26273 NextBio:48571
ArrayExpress:Q9UK99 Bgee:Q9UK99 CleanEx:HS_FBXO3
Genevestigator:Q9UK99 GermOnline:ENSG00000110429 Uniprot:Q9UK99
Length = 471
Score = 147 (56.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 39/144 (27%), Positives = 62/144 (43%)
Query: 216 PLCSIAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQL 275
P C +A T + + S F+PEL+ Y F Y IR+ + + + +CQL
Sbjct: 275 PEC-VATTGDITVSVSTSFLPELSSVHPP--HYFFTYRIRIEMSKDA-----LPEKACQL 326
Query: 276 QRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPG 335
R+W I G V+G +P++ PG+ + Y SCT + G + G +TF
Sbjct: 327 DSRYWRITNAKGDVEEVQGPGVVGEFPIISPGR-VYEYTSCTTFSTTSGYMEGYYTF--- 382
Query: 336 RLADPKGSPFEVVVAEFPLQRPDY 359
K F V + F + P +
Sbjct: 383 HFLYFKDKIFNVAIPRFHMACPTF 406
Score = 110 (43.8 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ WD LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLV 155
Query: 70 TDDFESIGAMGLIGGY 85
+G+M L Y
Sbjct: 156 VPGL--LGSMALSNHY 169
>RGD|1593433 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 RGD:1593433 GO:GO:0005634
SUPFAM:SSF81383 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:CH473949 CTD:26273
GeneTree:ENSGT00390000009225 KO:K10290 OMA:DLGRYIQ
OrthoDB:EOG4GF3F9 InterPro:IPR018958 SMART:SM00860 IPI:IPI00210722
RefSeq:NP_001103076.1 UniGene:Rn.201745 PRIDE:D4ABP9
Ensembl:ENSRNOT00000014478 GeneID:690634 KEGG:rno:690634
UCSC:RGD:1593433 NextBio:741350 Uniprot:D4ABP9
Length = 480
Score = 146 (56.5 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 39/144 (27%), Positives = 62/144 (43%)
Query: 216 PLCSIAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQL 275
P C +A T + + S F+PEL+ Y F Y IR+ + + + +CQL
Sbjct: 275 PEC-VATTGDITVSVSTSFLPELSSVHPP--HYFFTYRIRIEMSRDA-----LPEKACQL 326
Query: 276 QRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPG 335
R+W I G V+G +P++ PG+ + Y SCT + G + G +TF
Sbjct: 327 DSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRI-YEYTSCTTFSTTSGYMEGYYTF--- 382
Query: 336 RLADPKGSPFEVVVAEFPLQRPDY 359
K F V + F + P +
Sbjct: 383 HFLYFKDKVFNVAIPRFHMACPTF 406
Score = 110 (43.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ WD LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLV 155
Query: 70 TDDFESIGAMGLIGGY 85
+G+M L Y
Sbjct: 156 VPGL--LGSMALSNHY 169
>MGI|MGI:1929084 [details] [associations]
symbol:Fbxo3 "F-box protein 3" species:10090 "Mus musculus"
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001810
PROSITE:PS50181 SMART:SM00256 MGI:MGI:1929084 GO:GO:0005634
SUPFAM:SSF81383 EMBL:CH466519 eggNOG:COG2967 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
EMBL:BX640578 CTD:26273 GeneTree:ENSGT00390000009225
HOVERGEN:HBG005647 KO:K10290 OMA:DLGRYIQ OrthoDB:EOG4GF3F9
InterPro:IPR018958 SMART:SM00860 EMBL:AF233226 EMBL:AK004544
EMBL:AK019550 EMBL:AK028048 EMBL:AK031428 EMBL:AK049870
EMBL:AK050195 EMBL:AK151130 EMBL:AK151857 EMBL:AK152780
EMBL:AK167075 EMBL:BC010212 EMBL:BC058253 IPI:IPI00120202
IPI:IPI00410808 IPI:IPI00753481 RefSeq:NP_065618.1
RefSeq:NP_997598.1 UniGene:Mm.143768 ProteinModelPortal:Q9DC63
SMR:Q9DC63 STRING:Q9DC63 PhosphoSite:Q9DC63 PaxDb:Q9DC63
PRIDE:Q9DC63 Ensembl:ENSMUST00000028603 Ensembl:ENSMUST00000102565
Ensembl:ENSMUST00000111135 GeneID:57443 KEGG:mmu:57443
UCSC:uc008lji.1 UCSC:uc008ljk.1 InParanoid:Q3U9C1 ChiTaRS:FBXO3
NextBio:313845 Bgee:Q9DC63 CleanEx:MM_FBXO3 Genevestigator:Q9DC63
GermOnline:ENSMUSG00000027180 Uniprot:Q9DC63
Length = 480
Score = 146 (56.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 39/144 (27%), Positives = 62/144 (43%)
Query: 216 PLCSIAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQL 275
P C +A T + + S F+PEL+ Y F Y IR+ + + + +CQL
Sbjct: 275 PEC-VATTGDITVSVSTSFLPELSSVHPP--HYFFTYRIRIEMSRDA-----LPEKACQL 326
Query: 276 QRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPG 335
R+W I G V+G +P++ PG+ + Y SCT + G + G +TF
Sbjct: 327 DSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRI-YEYTSCTTFSTTSGYMEGYYTF--- 382
Query: 336 RLADPKGSPFEVVVAEFPLQRPDY 359
K F V + F + P +
Sbjct: 383 HFLYFKDKVFNVAIPRFHMACPTF 406
Score = 102 (41.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ W LK +L P +L++GA E D+ +E + KLP R YR +GQ+
Sbjct: 96 IKKAWRDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLV 155
Query: 70 TDDFESIGAMGLIGGY 85
+G+M L Y
Sbjct: 156 VPGL--LGSMALSNHY 169
>ZFIN|ZDB-GENE-050522-269 [details] [associations]
symbol:fbxo3 "F-box protein 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:BX957256 IPI:IPI00504452
Ensembl:ENSDART00000139382 ZFIN:ZDB-GENE-050522-269
GeneTree:ENSGT00390000009225 Bgee:F1R287 Gene3D:2.60.40.1470
InterPro:IPR007474 InterPro:IPR018958 InterPro:IPR001810
Pfam:PF04379 SMART:SM00256 SMART:SM00860 SUPFAM:SSF110069
SUPFAM:SSF81383 PROSITE:PS51087 PROSITE:PS50181 Uniprot:F1R287
Length = 451
Score = 134 (52.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 220 IAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRH 279
+A T + + S F+PEL+ + F Y IR+ + + + +CQL R+
Sbjct: 274 VATTGDITVSVSTSFLPELSSVHPP--HFFFTYRIRIEMAK-----SALPEKACQLDSRY 326
Query: 280 WIIHAXXXXXXXXXGEAVIGMYPLLHPGQ-NEFFYQSCTNLPASPGSVRGSFTFVPGRLA 338
W I G V+G +P++ PG+ +E Y SCT + + G +TF RL
Sbjct: 327 WKITNANGNVEEVRGPGVVGEFPVMTPGKVHE--YASCTTFSTTSEYMEGHYTF--HRLK 382
Query: 339 DPKGSPFEVVVAEFPLQRPDY 359
+ K F+V + F + P +
Sbjct: 383 N-KEEVFDVSIPRFHMVCPPF 402
Score = 110 (43.8 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 10 VKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLKVKLPVPTRILYRFCDGQECQ 69
+K+ WD LKN+L + P A+L++G E ++ +E + KLP R YR +GQ+
Sbjct: 92 LKKAWDDLKNFLNQKCPRMIASLKEGVREDELDTIEAQIGCKLPNDYRCSYRIHNGQKLV 151
Query: 70 TDDFESIGAMGLIGGY 85
+G+M L Y
Sbjct: 152 VPGL--MGSMALSNHY 165
>UNIPROTKB|Q60C69 [details] [associations]
symbol:apaG "Protein ApaG" species:243233 "Methylococcus
capsulatus str. Bath" [GO:0003674 "molecular_function" evidence=ND]
EMBL:AE017282 RefSeq:YP_112776.1 HSSP:Q7VU61
ProteinModelPortal:Q60C69 SMR:Q60C69 GeneID:3104089
GenomeReviews:AE017282_GR KEGG:mca:MCA0241 PATRIC:22604217
eggNOG:COG2967 HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT
ProtClustDB:PRK05461 Gene3D:2.60.40.1470 HAMAP:MF_00791
InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069
PROSITE:PS51087 Uniprot:Q60C69
Length = 126
Score = 143 (55.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 44/132 (33%), Positives = 61/132 (46%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAX 285
+K+ AV++ E + P D +Y FAY++ M N T + L RR WII
Sbjct: 8 LKVEVKAVYLREHSRP--DAHQYTFAYTVTME--------NTGTVPAKLLGRR-WIITDA 56
Query: 286 XXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPGRLADPKGSPF 345
GE V+G +P L PG+ F Y S + GS+ GS+ + AD G PF
Sbjct: 57 NGKTVEVVGEGVVGEHPYLRPGE-AFEYTSAATIATPVGSMHGSYQLI----ADD-GMPF 110
Query: 346 EVVVAEFPLQRP 357
E +A F L P
Sbjct: 111 EAPIAAFSLAIP 122
>DICTYBASE|DDB_G0282285 [details] [associations]
symbol:DDB_G0282285 "ApaG domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001810 PROSITE:PS50181 dictyBase:DDB_G0282285
SUPFAM:SSF81383 EMBL:AAFI02000046 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
KO:K10290 RefSeq:XP_001733003.1 ProteinModelPortal:B0G139
EnsemblProtists:DDB0237866 GeneID:8623456 KEGG:ddi:DDB_G0282285
ProtClustDB:CLSZ2734183 Uniprot:B0G139
Length = 525
Score = 149 (57.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 49/147 (33%), Positives = 65/147 (44%)
Query: 188 HGRRLHNGIIRLRDEENLKFINLFPEEPPLCSI-AVTNGVKIRASAVFIPELADPESDTE 246
H L G+ R K + +PE P VT GVKI+ SAV+IPE D
Sbjct: 373 HAFALEKGVFTTRR----KILYRYPEFSPYNGDEVVTQGVKIKCSAVYIPE------DEN 422
Query: 247 KYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHP 306
Y F Y + +S+ + N +CQL R WII + G VIG +P++ P
Sbjct: 423 SYTFFYRVTISMDKDEDPKN-----ACQLTHRFWII-STIDGSSNVNGPGVIGKFPIIKP 476
Query: 307 GQNEFFYQSCTNLPASPGSVRGSFTFV 333
G F Y S + S G + G FT V
Sbjct: 477 GVT-FEYCSRCEIERSQGHMGGYFTMV 502
Score = 50 (22.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 8 KRVKRCWDRLKNWLAENFPEAKATLRKGASEADIQQLEKSLK 49
K ++ WDR +NW+ N ++ S + +L ++K
Sbjct: 198 KTMRYIWDRFENWMDLNSMDSMKKSFHSISHTKLYKLISTIK 239
>UNIPROTKB|Q8EB92 [details] [associations]
symbol:apaG "Protein ApaG" species:211586 "Shewanella
oneidensis MR-1" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 RefSeq:NP_719182.1 PDB:1TZA
PDBsum:1TZA ProteinModelPortal:Q8EB92 SMR:Q8EB92 GeneID:1171301
KEGG:son:SO_3640 PATRIC:23526968 EvolutionaryTrace:Q8EB92
Uniprot:Q8EB92
Length = 126
Score = 119 (46.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ N +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDNSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPGRLADP 340
II G V+G P + P + Y S T L G + G++ G +++
Sbjct: 52 IITDANGKTSEVQGAGVVGETPTIPPN-TAYQYTSGTVLDTPFGIMYGTY----GMVSE- 105
Query: 341 KGSPFEVVVAEFPLQRP 357
G F ++ F L P
Sbjct: 106 SGEHFNAIIKPFRLATP 122
>TIGR_CMR|SO_3640 [details] [associations]
symbol:SO_3640 "apaG protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 RefSeq:NP_719182.1 PDB:1TZA
PDBsum:1TZA ProteinModelPortal:Q8EB92 SMR:Q8EB92 GeneID:1171301
KEGG:son:SO_3640 PATRIC:23526968 EvolutionaryTrace:Q8EB92
Uniprot:Q8EB92
Length = 126
Score = 119 (46.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 37/137 (27%), Positives = 61/137 (44%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
A+ N +++ +I + + PE EKYLF+Y+I + L E + +L+ RHW
Sbjct: 3 ALDNSIRVEVKTEYIEQQSSPED--EKYLFSYTITIINLGE---------QAAKLETRHW 51
Query: 281 IIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPGRLADP 340
II G V+G P + P + Y S T L G + G++ G +++
Sbjct: 52 IITDANGKTSEVQGAGVVGETPTIPPN-TAYQYTSGTVLDTPFGIMYGTY----GMVSE- 105
Query: 341 KGSPFEVVVAEFPLQRP 357
G F ++ F L P
Sbjct: 106 SGEHFNAIIKPFRLATP 122
>UNIPROTKB|Q0BYU0 [details] [associations]
symbol:apaG "ApaG protein" species:228405 "Hyphomonas
neptunium ATCC 15444" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 EMBL:CP000158
GenomeReviews:CP000158_GR RefSeq:YP_761353.1
ProteinModelPortal:Q0BYU0 STRING:Q0BYU0 GeneID:4288594
KEGG:hne:HNE_2671 PATRIC:32218209
BioCyc:HNEP228405:GI69-2681-MONOMER Uniprot:Q0BYU0
Length = 138
Score = 114 (45.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 40/143 (27%), Positives = 63/143 (44%)
Query: 215 PPLCSIAVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQ 274
PP A+T+GV+IR F+ + ++P K+++ Y++ + E + T++
Sbjct: 7 PPQYE-AITDGVRIRVRPKFLHDESEPTR--AKFMWQYTVEVE--NE----SDRTWT--- 54
Query: 275 LQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVP 334
+ RRHW I GE VIG P + PGQ F Y S L G + G++ V
Sbjct: 55 IIRRHWRIVDSAGRLQAVDGEGVIGQTPTVGPGQR-FSYTSGAPLATPSGMMTGTYDLV- 112
Query: 335 GRLADPKGSPFEVVVAEFPLQRP 357
D G ++ F L P
Sbjct: 113 ----DDAGEEMVAMIPAFSLDSP 131
>UNIPROTKB|Q9KUS3 [details] [associations]
symbol:apaG "Protein ApaG" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0008150 "biological_process"
evidence=ND] EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG2967
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
HAMAP:MF_00791 InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 PIR:A82323 RefSeq:NP_230096.1
PDB:1XVS PDBsum:1XVS ProteinModelPortal:Q9KUS3 SMR:Q9KUS3
DNASU:2615774 GeneID:2615774 KEGG:vch:VC0442 PATRIC:20079963
EvolutionaryTrace:Q9KUS3 Uniprot:Q9KUS3
Length = 126
Score = 109 (43.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/132 (25%), Positives = 58/132 (43%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAX 285
+KI+ +I E ++PE ++++FAY I I ++ + QL R W+I
Sbjct: 8 IKIQVQTRYIEEQSNPEY--QRFVFAYLI---------TIKNLSSQTVQLMSRRWLITDA 56
Query: 286 XXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPGRLADPKGSPF 345
G+ V+G P + +E+ Y S T L G ++G + + D +G F
Sbjct: 57 DGKQTVVEGDGVVGEQPRIK-ANDEYTYSSGTALDTPVGVMQGQYLMI-----DEQGESF 110
Query: 346 EVVVAEFPLQRP 357
V + F L P
Sbjct: 111 TVEIEPFRLAVP 122
>TIGR_CMR|VC_0442 [details] [associations]
symbol:VC_0442 "apaG protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0008150 "biological_process" evidence=ND]
EMBL:AE003852 GenomeReviews:AE003852_GR eggNOG:COG2967 KO:K06195
OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470 HAMAP:MF_00791
InterPro:IPR007474 InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069
PROSITE:PS51087 PIR:A82323 RefSeq:NP_230096.1 PDB:1XVS PDBsum:1XVS
ProteinModelPortal:Q9KUS3 SMR:Q9KUS3 DNASU:2615774 GeneID:2615774
KEGG:vch:VC0442 PATRIC:20079963 EvolutionaryTrace:Q9KUS3
Uniprot:Q9KUS3
Length = 126
Score = 109 (43.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/132 (25%), Positives = 58/132 (43%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAX 285
+KI+ +I E ++PE ++++FAY I I ++ + QL R W+I
Sbjct: 8 IKIQVQTRYIEEQSNPEY--QRFVFAYLI---------TIKNLSSQTVQLMSRRWLITDA 56
Query: 286 XXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPASPGSVRGSFTFVPGRLADPKGSPF 345
G+ V+G P + +E+ Y S T L G ++G + + D +G F
Sbjct: 57 DGKQTVVEGDGVVGEQPRIK-ANDEYTYSSGTALDTPVGVMQGQYLMI-----DEQGESF 110
Query: 346 EVVVAEFPLQRP 357
V + F L P
Sbjct: 111 TVEIEPFRLAVP 122
>UNIPROTKB|Q2GIY5 [details] [associations]
symbol:apaG "ApaG protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_505666.1 ProteinModelPortal:Q2GIY5 STRING:Q2GIY5
GeneID:3931308 KEGG:aph:APH_1120 PATRIC:20951010
BioCyc:APHA212042:GHPM-1126-MONOMER Uniprot:Q2GIY5
Length = 135
Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAX 285
+++ + ++ E + P + Y++ YS+R IN + S+ QL +R W I
Sbjct: 13 IEVEVTPSYLEEHSIPHENC--YIWLYSVR---------INNRSDSTVQLLKRSWKIIDS 61
Query: 286 XXXXXXXXGEAVIGMYPLLHPGQNEFF-YQSCTNLPASPGSVRGSFTFVPGRLADPKGSP 344
G V G P+L PG FF Y S T L G + G + FV + K
Sbjct: 62 KGVVNEVSGSGVAGSQPVLKPGA--FFEYTSGTCLSTPSGVMNGWYQFVD----EDKAQV 115
Query: 345 FEVVVAEFPLQRP 357
F V V F L P
Sbjct: 116 FYVDVPAFSLDSP 128
>TIGR_CMR|APH_1120 [details] [associations]
symbol:APH_1120 "apaG protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:CP000235
GenomeReviews:CP000235_GR eggNOG:COG2967 HOGENOM:HOG000255805
KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461 Gene3D:2.60.40.1470
InterPro:IPR007474 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_505666.1 ProteinModelPortal:Q2GIY5 STRING:Q2GIY5
GeneID:3931308 KEGG:aph:APH_1120 PATRIC:20951010
BioCyc:APHA212042:GHPM-1126-MONOMER Uniprot:Q2GIY5
Length = 135
Score = 100 (40.3 bits), Expect = 0.00012, P = 0.00012
Identities = 38/133 (28%), Positives = 56/133 (42%)
Query: 226 VKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHWIIHAX 285
+++ + ++ E + P + Y++ YS+R IN + S+ QL +R W I
Sbjct: 13 IEVEVTPSYLEEHSIPHENC--YIWLYSVR---------INNRSDSTVQLLKRSWKIIDS 61
Query: 286 XXXXXXXXGEAVIGMYPLLHPGQNEFF-YQSCTNLPASPGSVRGSFTFVPGRLADPKGSP 344
G V G P+L PG FF Y S T L G + G + FV + K
Sbjct: 62 KGVVNEVSGSGVAGSQPVLKPGA--FFEYTSGTCLSTPSGVMNGWYQFVD----EDKAQV 115
Query: 345 FEVVVAEFPLQRP 357
F V V F L P
Sbjct: 116 FYVDVPAFSLDSP 128
>UNIPROTKB|Q2GFG4 [details] [associations]
symbol:apaG "Protein ApaG" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000236 GenomeReviews:CP000236_GR eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 HAMAP:MF_00791 InterPro:IPR007474
InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_507819.1 ProteinModelPortal:Q2GFG4 STRING:Q2GFG4
GeneID:3927086 KEGG:ech:ECH_1033 PATRIC:20577426
BioCyc:ECHA205920:GJNR-1036-MONOMER Uniprot:Q2GFG4
Length = 134
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 37/141 (26%), Positives = 60/141 (42%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
++T ++++ ++ E + P + Y++ Y+IR + + S+ QL RR W
Sbjct: 7 SMTKLIEVKVVPSYLEEQSAPHENC--YIWLYNIR---------VKNKSNSTVQLLRRSW 55
Query: 281 IIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFF-YQSCTNLPASPGSVRGSFTFVPGRLAD 339
I G VIG P+L PG EFF Y S L G + G + F+ +
Sbjct: 56 KIIDSTGVINEVTGLGVIGKQPVLKPG--EFFEYTSGAYLSTPSGMMHGEYQFMD----E 109
Query: 340 PKGSPFEVVVAEFPLQRPDYI 360
F V + F L P Y+
Sbjct: 110 DAAQVFYVSIPMFSLDSP-YV 129
>TIGR_CMR|ECH_1033 [details] [associations]
symbol:ECH_1033 "apaG protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000236 GenomeReviews:CP000236_GR eggNOG:COG2967
HOGENOM:HOG000255805 KO:K06195 OMA:SRHWVIT ProtClustDB:PRK05461
Gene3D:2.60.40.1470 HAMAP:MF_00791 InterPro:IPR007474
InterPro:IPR023065 Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087
RefSeq:YP_507819.1 ProteinModelPortal:Q2GFG4 STRING:Q2GFG4
GeneID:3927086 KEGG:ech:ECH_1033 PATRIC:20577426
BioCyc:ECHA205920:GJNR-1036-MONOMER Uniprot:Q2GFG4
Length = 134
Score = 98 (39.6 bits), Expect = 0.00020, P = 0.00020
Identities = 37/141 (26%), Positives = 60/141 (42%)
Query: 221 AVTNGVKIRASAVFIPELADPESDTEKYLFAYSIRMSLLPEGCVINGMTFSSCQLQRRHW 280
++T ++++ ++ E + P + Y++ Y+IR + + S+ QL RR W
Sbjct: 7 SMTKLIEVKVVPSYLEEQSAPHENC--YIWLYNIR---------VKNKSNSTVQLLRRSW 55
Query: 281 IIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFF-YQSCTNLPASPGSVRGSFTFVPGRLAD 339
I G VIG P+L PG EFF Y S L G + G + F+ +
Sbjct: 56 KIIDSTGVINEVTGLGVIGKQPVLKPG--EFFEYTSGAYLSTPSGMMHGEYQFMD----E 109
Query: 340 PKGSPFEVVVAEFPLQRPDYI 360
F V + F L P Y+
Sbjct: 110 DAAQVFYVSIPMFSLDSP-YV 129
>UNIPROTKB|F1NNL9 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0070584 "mitochondrion
morphogenesis" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 SUPFAM:SSF141255
GeneTree:ENSGT00390000010198 OMA:LFERFLM EMBL:AADN02025881
IPI:IPI00883100 Ensembl:ENSGALT00000005087 Uniprot:F1NNL9
Length = 349
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 263 CV-INGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPA 321
C+ + + QL+ RHW I + G V+G P+L Q F Y S +L A
Sbjct: 247 CIRLENLDSEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQA 306
Query: 322 SPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQ 355
S G + G+F F P GS F+V + F L+
Sbjct: 307 SSGHMWGTFRF-----ERPDGSHFDVRIPPFSLE 335
>RGD|1307022 [details] [associations]
symbol:Poldip2 "polymerase (DNA-directed), delta interacting
protein 2" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 IPI:IPI01007599 Ensembl:ENSRNOT00000013100
Uniprot:E9PT51
Length = 367
Score = 114 (45.2 bits), Expect = 0.00077, P = 0.00077
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 263 CV-INGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPA 321
C+ + + QL+ RHW I + G V+G P+L Q F Y S +L A
Sbjct: 265 CIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQA 324
Query: 322 SPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQ 355
S G + G+F F P GS F+V + F L+
Sbjct: 325 SSGHMWGTFRF-----ERPDGSHFDVRIPPFSLE 353
>UNIPROTKB|A5D9H9 [details] [associations]
symbol:POLDIP2 "Polymerase (DNA-directed), delta
interacting protein 2" species:9913 "Bos taurus" [GO:0070584
"mitochondrion morphogenesis" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011722 SMART:SM00992 GO:GO:0005739
GO:GO:0003677 eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 CTD:26073 HOVERGEN:HBG053549
GeneTree:ENSGT00390000010198 HOGENOM:HOG000008122 OMA:LFERFLM
OrthoDB:EOG441QBM EMBL:DAAA02048600 EMBL:BC146200 EMBL:BT030598
IPI:IPI00694541 RefSeq:NP_001091572.1 UniGene:Bt.56102
Ensembl:ENSBTAT00000010675 GeneID:539673 KEGG:bta:539673
InParanoid:A5D9H9 NextBio:20878145 Uniprot:A5D9H9
Length = 368
Score = 114 (45.2 bits), Expect = 0.00077, P = 0.00077
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 263 CV-INGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPA 321
C+ + + QL+ RHW I + G V+G P+L Q F Y S +L A
Sbjct: 266 CIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQA 325
Query: 322 SPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQ 355
S G + G+F F P GS F+V + F L+
Sbjct: 326 SSGHMWGTFRF-----ERPDGSHFDVRIPPFSLE 354
>UNIPROTKB|E2QVV7 [details] [associations]
symbol:POLDIP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070584 "mitochondrion morphogenesis"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR011722 SMART:SM00992
GO:GO:0005739 GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584
SUPFAM:SSF141255 CTD:26073 GeneTree:ENSGT00390000010198 OMA:LFERFLM
EMBL:AAEX03006664 RefSeq:NP_001240832.1 UniGene:Cfa.26302
UniGene:Cfa.42286 Ensembl:ENSCAFT00000029631 GeneID:491162
KEGG:cfa:491162 NextBio:20864045 Uniprot:E2QVV7
Length = 368
Score = 114 (45.2 bits), Expect = 0.00077, P = 0.00077
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 263 CV-INGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPA 321
C+ + + QL+ RHW I + G V+G P+L Q F Y S +L A
Sbjct: 266 CIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQA 325
Query: 322 SPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQ 355
S G + G+F F P GS F+V + F L+
Sbjct: 326 SSGHMWGTFRF-----ERPDGSHFDVRIPPFSLE 354
>UNIPROTKB|Q9Y2S7 [details] [associations]
symbol:POLDIP2 "Polymerase delta-interacting protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR011722 SMART:SM00992 EMBL:AF179891 GO:GO:0005634
GO:GO:0003677 GO:GO:0042645 Gene3D:2.60.40.1470 InterPro:IPR007474
Pfam:PF04379 SUPFAM:SSF110069 PROSITE:PS51087 CleanEx:HS_POLD4
SUPFAM:SSF141255 EMBL:AF077203 EMBL:AK313232 EMBL:BC000655
EMBL:BC009265 IPI:IPI00165506 RefSeq:NP_056399.1 UniGene:Hs.241543
ProteinModelPortal:Q9Y2S7 SMR:Q9Y2S7 IntAct:Q9Y2S7
MINT:MINT-1383241 PhosphoSite:Q9Y2S7 DMDM:50401206 PRIDE:Q9Y2S7
DNASU:26073 GeneID:26073 KEGG:hsa:26073 UCSC:uc002haz.3 CTD:26073
GeneCards:GC17M026673 HGNC:HGNC:23781 MIM:611519 neXtProt:NX_Q9Y2S7
PharmGKB:PA134866227 HOVERGEN:HBG053549 InParanoid:Q9Y2S7
GenomeRNAi:26073 NextBio:47983 CleanEx:HS_POLDIP2
Genevestigator:Q9Y2S7 GermOnline:ENSG00000004142 Uniprot:Q9Y2S7
Length = 368
Score = 114 (45.2 bits), Expect = 0.00077, P = 0.00077
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 263 CV-INGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPA 321
C+ + + QL+ RHW I + G V+G P+L Q F Y S +L A
Sbjct: 266 CIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQA 325
Query: 322 SPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQ 355
S G + G+F F P GS F+V + F L+
Sbjct: 326 SSGHMWGTFRF-----ERPDGSHFDVRIPPFSLE 354
>MGI|MGI:1915061 [details] [associations]
symbol:Poldip2 "polymerase (DNA-directed), delta interacting
protein 2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0030674 "protein binding,
bridging" evidence=ISA] [GO:0042645 "mitochondrial nucleoid"
evidence=ISO] [GO:0070584 "mitochondrion morphogenesis"
evidence=IMP] InterPro:IPR011722 SMART:SM00992 MGI:MGI:1915061
GO:GO:0005739 GO:GO:0005634 GO:GO:0003677 GO:GO:0030674
eggNOG:COG2967 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584 SUPFAM:SSF141255
CTD:26073 HOVERGEN:HBG053549 EMBL:BC006833 EMBL:BC012879
IPI:IPI00126634 RefSeq:NP_080665.1 UniGene:Mm.197493
UniGene:Mm.473921 ProteinModelPortal:Q91VA6 SMR:Q91VA6
STRING:Q91VA6 PhosphoSite:Q91VA6 PaxDb:Q91VA6 PRIDE:Q91VA6
Ensembl:ENSMUST00000001127 GeneID:67811 KEGG:mmu:67811
GeneTree:ENSGT00390000010198 HOGENOM:HOG000008122 InParanoid:Q91VA6
OMA:LFERFLM OrthoDB:EOG441QBM ChiTaRS:POLDIP2 NextBio:325615
Bgee:Q91VA6 Genevestigator:Q91VA6 GermOnline:ENSMUSG00000001100
Uniprot:Q91VA6
Length = 368
Score = 114 (45.2 bits), Expect = 0.00077, P = 0.00077
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 263 CV-INGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPA 321
C+ + + QL+ RHW I + G V+G P+L Q F Y S +L A
Sbjct: 266 CIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQA 325
Query: 322 SPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQ 355
S G + G+F F P GS F+V + F L+
Sbjct: 326 SSGHMWGTFRF-----ERPDGSHFDVRIPPFSLE 354
>UNIPROTKB|I3LMX3 [details] [associations]
symbol:POLDIP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070584 "mitochondrion morphogenesis" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR011722 SMART:SM00992 GO:GO:0005739
GO:GO:0003677 Gene3D:2.60.40.1470 InterPro:IPR007474 Pfam:PF04379
SUPFAM:SSF110069 PROSITE:PS51087 GO:GO:0070584 SUPFAM:SSF141255
GeneTree:ENSGT00390000010198 OMA:LFERFLM EMBL:FP565711
Ensembl:ENSSSCT00000023831 Uniprot:I3LMX3
Length = 370
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00078
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 263 CV-INGMTFSSCQLQRRHWIIHAXXXXXXXXXGEAVIGMYPLLHPGQNEFFYQSCTNLPA 321
C+ + + QL+ RHW I + G V+G P+L Q F Y S +L A
Sbjct: 268 CIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQA 327
Query: 322 SPGSVRGSFTFVPGRLADPKGSPFEVVVAEFPLQ 355
S G + G+F F P GS F+V + F L+
Sbjct: 328 SSGHMWGTFRF-----ERPDGSHFDVRIPPFSLE 356
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.141 0.444 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 361 352 0.00078 117 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 607 (65 KB)
Total size of DFA: 255 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.09u 0.10s 27.19t Elapsed: 00:00:01
Total cpu time: 27.09u 0.10s 27.19t Elapsed: 00:00:01
Start: Fri May 10 17:33:58 2013 End: Fri May 10 17:33:59 2013