Citrus Sinensis ID: 018094
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | 2.2.26 [Sep-21-2011] | |||||||
| Q9ZRF1 | 359 | Probable mannitol dehydro | N/A | no | 0.983 | 0.988 | 0.808 | 1e-163 | |
| P93257 | 361 | Probable mannitol dehydro | N/A | no | 0.986 | 0.986 | 0.772 | 1e-158 | |
| Q6V4H0 | 360 | 8-hydroxygeraniol dehydro | N/A | no | 0.994 | 0.997 | 0.768 | 1e-151 | |
| Q2KNL6 | 360 | Geraniol dehydrogenase 1 | N/A | no | 0.991 | 0.994 | 0.701 | 1e-146 | |
| Q38707 | 365 | Mannitol dehydrogenase OS | N/A | no | 0.994 | 0.983 | 0.696 | 1e-145 | |
| Q02972 | 359 | Cinnamyl alcohol dehydrog | yes | no | 0.972 | 0.977 | 0.749 | 1e-143 | |
| P42754 | 337 | Mannitol dehydrogenase (F | N/A | no | 0.930 | 0.997 | 0.744 | 1e-142 | |
| Q02971 | 357 | Cinnamyl alcohol dehydrog | no | no | 0.988 | 1.0 | 0.725 | 1e-142 | |
| P42734 | 360 | Probable cinnamyl alcohol | no | no | 0.988 | 0.991 | 0.661 | 1e-137 | |
| O65621 | 363 | Probable cinnamyl alcohol | no | no | 0.983 | 0.977 | 0.659 | 1e-137 |
| >sp|Q9ZRF1|MTDH_FRAAN Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 576 bits (1484), Expect = e-163, Method: Compositional matrix adjust.
Identities = 287/355 (80%), Positives = 318/355 (89%)
Query: 4 APEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN 63
A EQEH K A GWAARD+SGVLSPF+F RR TGEKDVTFKV +CGICHSDLH++KNEWG
Sbjct: 2 AIEQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGF 61
Query: 64 AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
+ YP+VPGHEIVG VTEVGSKV KFKVGD+VGVGC+VGSCRSC++C LENYCPK I+T
Sbjct: 62 STYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILT 121
Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP 183
Y KY+DG+ TYGGYSDIMVADEHF+VRIP+ PLD APLLCAGIT YSPLR++GLDKP
Sbjct: 122 YGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKP 181
Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP K+ EA++ LGADSFLVSRDQD+MQA
Sbjct: 182 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQA 241
Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI 303
A+GTMDGIIDTVSA HPL+PLIGLL S GKLV+VGAPEKPLELP F LLMGRK+V GS I
Sbjct: 242 AIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGI 301
Query: 304 GGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
GGMKETQEMIDFAA+HNI ADIEVIP DY+NTA+ERL KADVRYRFVID+ NT+K
Sbjct: 302 GGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTLK 356
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Fragaria ananassa (taxid: 3747) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 5EC: 5 |
| >sp|P93257|MTDH_MESCR Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 557 bits (1436), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/356 (77%), Positives = 317/356 (89%)
Query: 4 APEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN 63
APE HP+ AFGWAARDTSG LSP FSRRATGE+DVTFKV +CGICHSDLH IKNEWGN
Sbjct: 5 APENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGN 64
Query: 64 AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
A+YP +PGHEIVGVVTEVG+KV FKVGDKVGVGCMVGSCRSC+SC LENYCPK+I+T
Sbjct: 65 AVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILT 124
Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP 183
Y + Y+DGT+TYGGYSDIMV +EHF VRIP+ LDATAPLLCAG+TVYSPL+ + LDKP
Sbjct: 125 YGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKP 184
Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
G+H+GVVGLGGLGH+AVKF KA G KVTVISTSP+KK EA+ RLGADSF+VSR+ ++MQ+
Sbjct: 185 GLHIGVVGLGGLGHMAVKFGKAFGAKVTVISTSPNKKDEAVNRLGADSFVVSREPEQMQS 244
Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI 303
AMGT+DGIIDTVSA HPL+PL+GLLKSQGK+++VG P+KPLELP F LL GRKI+ GS I
Sbjct: 245 AMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCI 304
Query: 304 GGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
GGMKETQEMIDFAAKH+I++DIEV+P DYVNTA+ERL K DVRYRFVIDVANT+K+
Sbjct: 305 GGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Mesembryanthemum crystallinum (taxid: 3544) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q6V4H0|10HGO_CATRO 8-hydroxygeraniol dehydrogenase OS=Catharanthus roseus GN=10HGO PE=1 SV=1 | Back alignment and function description |
|---|
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 276/359 (76%), Positives = 312/359 (86%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++PE EHP AFGWAARDTSG LSPFHFSRRATGE DV FKV +CGICHSDLH+IKNE
Sbjct: 1 MAKSPEVEHPVKAFGWAARDTSGHLSPFHFSRRATGEHDVQFKVLYCGICHSDLHMIKNE 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG YPIVPGHEIVG+VTEVGSKV KFKVGDKVGVGC+VGSCR CD C DLENYCP
Sbjct: 61 WGFTKYPIVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCLVGSCRKCDMCTKDLENYCPGQ 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I+TY+ Y DGT TYGGYSD+MVADEHFV+R PE P+D APLLCAGIT YSPLR++GL
Sbjct: 121 ILTYSATYTDGTTTYGGYSDLMVADEHFVIRWPENLPMDIGAPLLCAGITTYSPLRYFGL 180
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
DKPG HVGVVGLGGLGHVAVKFAKA G KVTVISTS SKK EA+E+LGADSFLVSRD ++
Sbjct: 181 DKPGTHVGVVGLGGLGHVAVKFAKAFGAKVTVISTSESKKQEALEKLGADSFLVSRDPEQ 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
M+AA ++DGIIDTVSA+HP+MPL+ +LKS GKL+LVGAPEKPLELP+F L+ GRKI+ G
Sbjct: 241 MKAAAASLDGIIDTVSAIHPIMPLLSILKSHGKLILVGAPEKPLELPSFPLIAGRKIIAG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
S IGG+KETQEMIDFAAKHN+ D+E++ DYVNTA+ERL KADV+YRFVIDVANT+KS
Sbjct: 301 SAIGGLKETQEMIDFAAKHNVLPDVELVSMDYVNTAMERLLKADVKYRFVIDVANTLKS 359
|
Dehydrogenase involved in the biosynthesis of oxogeranial from hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine. Catharanthus roseus (taxid: 4058) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 3 EC: 2 EC: 4 |
| >sp|Q2KNL6|GEDH1_OCIBA Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 251/358 (70%), Positives = 297/358 (82%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++PE EHP A GWAA D SG SPF+FSRRATGE+DV F+V +CG+CHSDLH++KNE
Sbjct: 1 MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNE 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG YPIVPGHEIVG+VTEVGSKV K K+GDKVGVG +VGSCR CD C+ DLENYC K
Sbjct: 61 WGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQ 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I+TY Y DGTI GGYSDIMVADEHF++R PE PLDA APLLCAGIT YSPL+++GL
Sbjct: 121 ILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGL 180
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
DKPG+ VGV GLGGLGHVAVKFAKA G KVTVISTS SKK EA++ LG D F+VS D +
Sbjct: 181 DKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQ 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
MQAA+GT+DGIIDTVSA HP++PL+ LLK GKL++VG P+KPL+LP F L+ GR+ + G
Sbjct: 241 MQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
S IGG+KETQEMIDFAAK+NI AD+EVIP DY+NTA++RL K+DV+YRFVIDV ++K
Sbjct: 301 SGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSLK 358
|
Involved in the production of citral, a mixture of geranial and neral with a strong lemony scent. Reversibly oxidizes geraniol and nerol in equal efficiency. Also active, although at a lower efficiency, with cinnamyl alcohol. Ocimum basilicum (taxid: 39350) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 3 |
| >sp|Q38707|MTDH_APIGR Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 250/359 (69%), Positives = 296/359 (82%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++ E EHP AFGWAARDT+G+LSPF FSRRATGEKDV KV CG+CHSD H+I N
Sbjct: 1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNN 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG YPIVPGHEIVGVVTEVGSKV K KVGD VG+GC+VGSCRSC+SC + E++C
Sbjct: 61 WGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENT 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I TY + Y DGT+T+GGYSD MVADEHF++R P+ PLD+ APLLCAGIT YSPL++YGL
Sbjct: 121 IDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGL 180
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
DKPG +GVVGLGGLGHVAVK AKA G +VTVI S SK+ EA+E+LGADSFL++ DQ++
Sbjct: 181 DKPGTKIGVVGLGGLGHVAVKMAKAFGAQVTVIDISESKRKEALEKLGADSFLLNSDQEQ 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
M+ A ++DGIIDTV HPL PL LLK GKLV+VGAPEKP ELP FSLL GRK++GG
Sbjct: 241 MKGARSSLDGIIDTVPVNHPLAPLFDLLKPNGKLVMVGAPEKPFELPVFSLLKGRKLLGG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
++ GG+KETQEM+DFAAKHNI AD+EVIP DYVNTA+ERL K+DVRYRFVID+ANTM++
Sbjct: 301 TINGGIKETQEMLDFAAKHNITADVEVIPMDYVNTAMERLVKSDVRYRFVIDIANTMRT 359
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Apium graveolens (taxid: 4045) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q02972|CADH8_ARATH Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1304), Expect = e-143, Method: Compositional matrix adjust.
Identities = 263/351 (74%), Positives = 298/351 (84%)
Query: 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVP 70
K AFG AA+D SGVLSPF F+RR TGEKDV FKV CGICHSDLH++KNEWG + YP+VP
Sbjct: 7 KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVP 66
Query: 71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
GHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC +ENYCPK I TY Y+D
Sbjct: 67 GHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYD 126
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
TITYGGYSD MV +E FV+RIP+ PLDA APLLCAGITVYSP++++GLDKPGMH+GVV
Sbjct: 127 NTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186
Query: 191 GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
GLGGLGHV VKFAKAMG KVTVISTS K+ EAI RLGAD+FLVSRD +++ AMGTMDG
Sbjct: 187 GLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDG 246
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
IIDTVSA H L+PL+GLLK +GKLV+VGAPEKPLELP L+ RK+V GSMIGG+KETQ
Sbjct: 247 IIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQ 306
Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 361
EMID A KHNI ADIE+I ADYVNTA+ERL KADVRYRFVIDVANT+K P
Sbjct: 307 EMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357
|
Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|P42754|MTDH_PETCR Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 504 bits (1298), Expect = e-142, Method: Compositional matrix adjust.
Identities = 250/336 (74%), Positives = 286/336 (85%)
Query: 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGS 83
+LSPF FSRRATG+ DV FKV +CG+CHSDLH++KNEWG YPIVPGHEIVG VTEVGS
Sbjct: 1 ILSPFKFSRRATGDNDVRFKVLYCGVCHSDLHMVKNEWGMTTYPIVPGHEIVGRVTEVGS 60
Query: 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
KV KFKVGD VGVGC+VGSC SC++C D EN C K + TYA DG+ITYGGY+D MV
Sbjct: 61 KVEKFKVGDAVGVGCLVGSCLSCENCDDDSENNCAKQVQTYAFTNVDGSITYGGYADSMV 120
Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
AD+HFV+R PE PLD+ APLLCAGIT YSPLR++GLDKPG VGVVGLGGLGHVAVK A
Sbjct: 121 ADQHFVLRWPENLPLDSGAPLLCAGITTYSPLRYHGLDKPGTKVGVVGLGGLGHVAVKMA 180
Query: 204 KAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263
KA G VTVISTS SKK EA+E+LGAD FLVS D D+MQAA GT+ GIIDTVSA+HP++P
Sbjct: 181 KAFGAHVTVISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVP 240
Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 323
L+GLLK GKLV+VGAPEKPLELP F LLMGRK++ GS IGG+KETQEM+DFAA+HNI A
Sbjct: 241 LLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITA 300
Query: 324 DIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
D+EVIP DYVNTA+ERL K+DVRYRFVIDVANT+K+
Sbjct: 301 DVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTIKT 336
|
Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level. Petroselinum crispum (taxid: 4043) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 5 EC: 5 |
| >sp|Q02971|CADH7_ARATH Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 503 bits (1296), Expect = e-142, Method: Compositional matrix adjust.
Identities = 262/361 (72%), Positives = 302/361 (83%), Gaps = 4/361 (1%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
MG+ E+E AFG AA+D SG+LSPF FSRRATGEKDV FKV CGICH+DL + KNE
Sbjct: 1 MGKVLEKE----AFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNE 56
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG YP+VPGHEIVGVVTEVG+KV KF GDKVGVG M GSCRSCDSC ENYCPK+
Sbjct: 57 WGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKM 116
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I+T K D T+T+GGYSD MV E F++RIP+ PLD APLLCAG+TVYSP++++GL
Sbjct: 117 ILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGL 176
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
DKPGMH+GVVGLGGLGHVAVKFAKAMG KVTVISTS K+ EA+ RLGAD+FLVSRD +
Sbjct: 177 DKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQ 236
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
M+ AMGTMDGIIDTVSA HPL+PL+GLLK++GKLV+VGAP +PLELP F L+ GRK+V G
Sbjct: 237 MKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVG 296
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
SM+GG+KETQEM+D A KHNI ADIE+I ADYVNTA+ERLAKADV+YRFVIDVANTMK T
Sbjct: 297 SMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356
Query: 361 P 361
P
Sbjct: 357 P 357
|
Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|P42734|CADH9_ARATH Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 487 bits (1254), Expect = e-137, Method: Compositional matrix adjust.
Identities = 236/357 (66%), Positives = 286/357 (80%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++PE EHP FGW ARD SGVLSPFHFSRR GE DVT K+ CG+CH+DLH IKN+
Sbjct: 1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKND 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG + YP+VPGHEIVG+ T+VG V+KFK GD+VGVG + GSC+SC+SC DLENYCP++
Sbjct: 61 WGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQM 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
TY DGT YGGYS+ +V D+ FV+R PE P D+ APLLCAGITVYSP+++YG+
Sbjct: 121 SFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGM 180
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
+ G H+GV GLGGLGHVAVK KA G+KVTVIS+S +K EAI LGADSFLV+ D +
Sbjct: 181 TEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQK 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
M+AA+GTMD IIDT+SAVH L PL+GLLK GKL+ +G PEKPLELP F L++GRK+VGG
Sbjct: 241 MKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
S +GGMKETQEM+DF AKHNI ADIE+I D +NTA+ERLAK+DVRYRFVIDVAN++
Sbjct: 301 SDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357
|
Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
| >sp|O65621|CADH6_ARATH Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 487 bits (1253), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/355 (65%), Positives = 292/355 (82%)
Query: 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI 65
E+E AFGWAARD+SG LSPF FSRR TGE++V KV +CGICHSDLH +KNEW ++I
Sbjct: 7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSI 66
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SCR+C+SC D ENYC K I TY
Sbjct: 67 YPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYN 126
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
+HDGTI YGGYSD +V DE + V+IP PL + APLLCAGI++YSP++++GL P
Sbjct: 127 GVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDK 186
Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
HVG+VGLGGLGH+ V+FAKA G KVTV+S++ K +A++ LGAD FLVS D+D+M+AAM
Sbjct: 187 HVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAM 246
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
GTMDGIIDTVSA H + PLIGLLKS GKLVL+GA EKP ++ AFSL++GRK + GS IGG
Sbjct: 247 GTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGG 306
Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
M+ETQEMIDFAA+H I+A+IE+I DYVNTA++RLAK DVRYRFVID++NT+ +T
Sbjct: 307 MQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAAT 361
|
Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 9 EC: 5 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | ||||||
| 255587709 | 362 | alcohol dehydrogenase, putative [Ricinus | 0.980 | 0.977 | 0.824 | 1e-169 | |
| 255587478 | 359 | alcohol dehydrogenase, putative [Ricinus | 0.983 | 0.988 | 0.814 | 1e-169 | |
| 224138226 | 362 | cinnamyl alcohol dehydrogenase-like prot | 0.986 | 0.983 | 0.823 | 1e-168 | |
| 118489566 | 362 | unknown [Populus trichocarpa x Populus d | 0.986 | 0.983 | 0.820 | 1e-167 | |
| 224104043 | 360 | cinnamyl alcohol dehydrogenase-like prot | 0.977 | 0.980 | 0.832 | 1e-167 | |
| 224144875 | 360 | cinnamyl alcohol dehydrogenase-like prot | 0.977 | 0.980 | 0.832 | 1e-167 | |
| 327202268 | 361 | cinnamyl alcohol dehydrogenase [Sinopodo | 0.997 | 0.997 | 0.819 | 1e-167 | |
| 224104051 | 360 | cinnamyl alcohol dehydrogenase-like prot | 0.977 | 0.980 | 0.835 | 1e-166 | |
| 358248942 | 362 | uncharacterized protein LOC100809071 [Gl | 0.986 | 0.983 | 0.803 | 1e-166 | |
| 359496607 | 360 | PREDICTED: probable mannitol dehydrogena | 0.994 | 0.997 | 0.799 | 1e-165 |
| >gi|255587709|ref|XP_002534367.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525426|gb|EEF28018.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 292/354 (82%), Positives = 326/354 (92%)
Query: 5 PEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA 64
PE++HP+ AFGWAARD SGVLSPF FSRR TGEKDV+FKV +CG+CHSDLH++KNEWG +
Sbjct: 6 PEKDHPRKAFGWAARDQSGVLSPFTFSRRETGEKDVSFKVLYCGMCHSDLHMVKNEWGTS 65
Query: 65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
YP+VPGHEIVGVVTEVGSKV K KVGDKVGVGCMVGSCRSC++C DLENYCPK+I+TY
Sbjct: 66 TYPLVPGHEIVGVVTEVGSKVEKIKVGDKVGVGCMVGSCRSCNNCNKDLENYCPKMILTY 125
Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
KY+DGT TYGGYSDIMV+DEHFVVRIP+ PLDATAPLLCAGITVYSPL++YGLDKPG
Sbjct: 126 GAKYYDGTTTYGGYSDIMVSDEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPG 185
Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
M +GVVGLGGLGH+AVKFAKAMG KVTVISTSP+KK EAIERLGADSFLVSRDQD+M+ A
Sbjct: 186 MQLGVVGLGGLGHMAVKFAKAMGAKVTVISTSPNKKQEAIERLGADSFLVSRDQDQMKGA 245
Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304
+GTMDGIIDTVSA+HPL PLIGLLKS GKLVLVGAPEKPLELPAF L+ GRK+VGGS IG
Sbjct: 246 IGTMDGIIDTVSAMHPLSPLIGLLKSDGKLVLVGAPEKPLELPAFPLIGGRKLVGGSCIG 305
Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
GMKETQEMIDFAAKH+I ADIEVIPA+YVNTA+ER+ KADVRYRFVID+ NT+K
Sbjct: 306 GMKETQEMIDFAAKHSITADIEVIPANYVNTAMERMLKADVRYRFVIDIGNTLK 359
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255587478|ref|XP_002534286.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223525574|gb|EEF28097.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust.
Identities = 289/355 (81%), Positives = 324/355 (91%)
Query: 5 PEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA 64
PE+EHP+ AFGWAARD SGVLSP FSRR TGEKDV+F+V +CG+CHSDLH++KNEWG +
Sbjct: 3 PEEEHPRQAFGWAARDQSGVLSPLKFSRRETGEKDVSFRVMYCGMCHSDLHMVKNEWGIS 62
Query: 65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
YP+VPGHEIVGVVTEVGSKV KFKVG+KVGVGCMVGSCRSCD+C DLENYCP++I+TY
Sbjct: 63 AYPLVPGHEIVGVVTEVGSKVEKFKVGEKVGVGCMVGSCRSCDNCTNDLENYCPEIILTY 122
Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
KY+DGT TYGGYSDIMVA+EHFVVRIP+ PLDATAPLLCAGITVYSPL++YGLDKPG
Sbjct: 123 GAKYYDGTTTYGGYSDIMVANEHFVVRIPDNLPLDATAPLLCAGITVYSPLKYYGLDKPG 182
Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
+ VVGLGGLGH+AVKFAKAMG KVTVISTSP+KK EAIERLGADSFLV+RDQD+M+ A
Sbjct: 183 TQLAVVGLGGLGHMAVKFAKAMGAKVTVISTSPNKKQEAIERLGADSFLVTRDQDQMKGA 242
Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304
MGTMDGIIDTVSA+H L+PLIGLLKS GKLVLVGAPEKPLELPAF LL GRK+VGGS IG
Sbjct: 243 MGTMDGIIDTVSAMHLLLPLIGLLKSHGKLVLVGAPEKPLELPAFPLLAGRKMVGGSGIG 302
Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
GMKETQEM+DFAAKH+I ADIEVIP DYVNTA+ER+ KADVRYRFVID+ NT+KS
Sbjct: 303 GMKETQEMLDFAAKHSITADIEVIPVDYVNTAMERMLKADVRYRFVIDIGNTLKS 357
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224138226|ref|XP_002322761.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222867391|gb|EEF04522.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 293/356 (82%), Positives = 321/356 (90%)
Query: 3 QAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG 62
+ PE+EHPK AFGWAARD SGVLSPF FSRRATGEKDV FKV +CGICHSDLH++KNEWG
Sbjct: 4 KLPEEEHPKPAFGWAARDQSGVLSPFKFSRRATGEKDVAFKVLYCGICHSDLHMVKNEWG 63
Query: 63 NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
YP++PGHEIVGVVTEVGSKV KFKVGDKVGVGCMVGSCRSCDSC +LENYC K I+
Sbjct: 64 VTQYPLIPGHEIVGVVTEVGSKVEKFKVGDKVGVGCMVGSCRSCDSCDNNLENYCSKKIL 123
Query: 123 TYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182
TY KY+DGT+TYGGYSD MVADEHF+VRIP PLDA APLLCAGITVYSPLR++GLDK
Sbjct: 124 TYGAKYYDGTVTYGGYSDNMVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDK 183
Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
PGMHVG+VGLGGLGHVAVKFA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQ
Sbjct: 184 PGMHVGIVGLGGLGHVAVKFARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQ 243
Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302
AAMGT+DGIIDTVSAVHPL+PL+ LLKS GKLVLVGAPEKPLELP F L+ GRK VGGS
Sbjct: 244 AAMGTLDGIIDTVSAVHPLLPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRKTVGGSC 303
Query: 303 IGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
+GG+KETQEMIDFAAKHNI ADIEVIP DYVNTA+ER+ KADVRYRFVIDV T+K
Sbjct: 304 VGGIKETQEMIDFAAKHNITADIEVIPMDYVNTAMERVLKADVRYRFVIDVGKTLK 359
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118489566|gb|ABK96585.1| unknown [Populus trichocarpa x Populus deltoides] | Back alignment and taxonomy information |
|---|
Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust.
Identities = 292/356 (82%), Positives = 319/356 (89%)
Query: 3 QAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG 62
+ PE+EHPK AFGWAARD SGVLSPF FSRRATGEKDV F V +CGICHSDLH++KNEWG
Sbjct: 4 KLPEEEHPKPAFGWAARDQSGVLSPFKFSRRATGEKDVAFTVLYCGICHSDLHMVKNEWG 63
Query: 63 NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
YP++PGHEIVGVVTEVGSKV KFKVGDKVGVGCMVGSCRSCDSC +LENYC K I+
Sbjct: 64 VTQYPLIPGHEIVGVVTEVGSKVEKFKVGDKVGVGCMVGSCRSCDSCDNNLENYCSKKIL 123
Query: 123 TYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182
TY KY+DGT+TYGGYSD MVADEHF+VRIP PLDA APLLCAGITVYSPLR++GLDK
Sbjct: 124 TYGAKYYDGTVTYGGYSDNMVADEHFIVRIPNNLPLDAGAPLLCAGITVYSPLRYFGLDK 183
Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
PGMHVG+VGLGGLGHVAVKFA+AMGVKVTVISTSP+KK EA+E LGADSFLVSRDQD+MQ
Sbjct: 184 PGMHVGIVGLGGLGHVAVKFARAMGVKVTVISTSPNKKQEALENLGADSFLVSRDQDQMQ 243
Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302
AAMGT+DGIIDTVSAVHPL+PL+ LLKS GKLVLVGAPEKPLELP F L+ GRK VGGS
Sbjct: 244 AAMGTLDGIIDTVSAVHPLLPLVALLKSHGKLVLVGAPEKPLELPVFPLITGRKTVGGSC 303
Query: 303 IGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
GG+KETQEMIDFAAKHNI ADIEVIP DYVNTA+ER+ KADVRYRFVIDV T+K
Sbjct: 304 FGGIKETQEMIDFAAKHNITADIEVIPMDYVNTAMERVLKADVRYRFVIDVGKTLK 359
|
Source: Populus trichocarpa x Populus deltoides Species: Populus trichocarpa x Populus deltoides Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224104043|ref|XP_002313294.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849702|gb|EEE87249.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1529), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/353 (83%), Positives = 318/353 (90%)
Query: 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI 65
E+EHP AFGWAARD SGVLSPF FSRR+TGEKDV FKV CGICHSDLH+ KNEWG A
Sbjct: 7 EEEHPNKAFGWAARDQSGVLSPFKFSRRSTGEKDVRFKVLFCGICHSDLHMAKNEWGTAT 66
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGC+VGSC SCDSC +LENYCPK+I+TY+
Sbjct: 67 YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCLVGSCHSCDSCNNNLENYCPKMILTYS 126
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
KYHDGT TYGGYSD MV DEHFV+RIP+ PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186
Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAV 246
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MGRKIVGGS IGG
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRKIVGGSTIGG 306
Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
MKETQEMIDFAAK+NI ADIEVI DYVNTA+ERL+K DVRYRFVID+ NTMK
Sbjct: 307 MKETQEMIDFAAKNNITADIEVISMDYVNTAMERLSKTDVRYRFVIDIGNTMK 359
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224144875|ref|XP_002336182.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222831876|gb|EEE70353.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/353 (83%), Positives = 318/353 (90%)
Query: 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI 65
E+EHP AFGWAARD SGVLSPF FSRR+TGEKDV FKV CGICHSDLH+ KNEWG A
Sbjct: 7 EEEHPTKAFGWAARDQSGVLSPFKFSRRSTGEKDVRFKVLFCGICHSDLHMAKNEWGTAT 66
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGC+VGSC SCDSC +LENYCPK+I+TY+
Sbjct: 67 YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCLVGSCHSCDSCNNNLENYCPKMILTYS 126
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
KYHDGT TYGGYSD MV DEHFV+RIP+ PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVIRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186
Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAA+
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAV 246
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MGRKIVGGS IGG
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRKIVGGSTIGG 306
Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
MKETQEMIDFAAK+NI ADIEVI DYVNTA+ERL+K DVRYRFVID+ NTMK
Sbjct: 307 MKETQEMIDFAAKNNITADIEVISMDYVNTAMERLSKTDVRYRFVIDIGNTMK 359
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|327202268|gb|AEA36767.1| cinnamyl alcohol dehydrogenase [Sinopodophyllum hexandrum] | Back alignment and taxonomy information |
|---|
Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust.
Identities = 295/360 (81%), Positives = 327/360 (90%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M +PEQEHPK A GWAARDTSGVLSPF+FSRR TGEKDV FKV +CGICHSDLH++KNE
Sbjct: 1 MVASPEQEHPKKAIGWAARDTSGVLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMVKNE 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG++ YP+VPGHEIVGVVTEVGSKV KVGDKVGVGCMVGSCRSCDSCA LENYCPK+
Sbjct: 61 WGSSTYPLVPGHEIVGVVTEVGSKVQNIKVGDKVGVGCMVGSCRSCDSCADHLENYCPKM 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I+T++ K +DGTITYGGYSDIMVADEHF+VRIPE PLD APLLCA IT YSPLR +GL
Sbjct: 121 ILTHSAKNYDGTITYGGYSDIMVADEHFIVRIPENLPLDGAAPLLCARITTYSPLRHFGL 180
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
DKPGMHVGVVGLGGLGHVAVKFAKA+GVKVTVISTSP KK+EA+E L ADSFLVS DQ+E
Sbjct: 181 DKPGMHVGVVGLGGLGHVAVKFAKALGVKVTVISTSPKKKTEAVEHLHADSFLVSTDQNE 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
MQAAMGTMDGIIDTVSAVHPL+PLIGLLK+QGK+V+VGAPEKPLELP F L+MGRKI+GG
Sbjct: 241 MQAAMGTMDGIIDTVSAVHPLVPLIGLLKTQGKIVMVGAPEKPLELPVFPLIMGRKIIGG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
S IGGMKETQEMI+FAAKHNI ADIEVIP DYVNTA++RL KADVRYRFVID+ NT+K++
Sbjct: 301 SCIGGMKETQEMINFAAKHNITADIEVIPIDYVNTAMDRLVKADVRYRFVIDIGNTLKAS 360
|
Source: Sinopodophyllum hexandrum Species: Sinopodophyllum hexandrum Genus: Sinopodophyllum Family: Berberidaceae Order: Ranunculales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224104051|ref|XP_002313297.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] gi|222849705|gb|EEE87252.1| cinnamyl alcohol dehydrogenase-like protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 295/353 (83%), Positives = 316/353 (89%)
Query: 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI 65
E+EHP AFGWAARD SGVLSPF FSRR+TGE DV FKV CGICHSDLH+ KNEWG +
Sbjct: 7 EEEHPTKAFGWAARDQSGVLSPFKFSRRSTGENDVRFKVLFCGICHSDLHMAKNEWGTST 66
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP+VPGHEIVG VTEVGSKV KFKVGDKVGVGCMVGSC SC SC DLENYCPK+I+TY+
Sbjct: 67 YPLVPGHEIVGEVTEVGSKVEKFKVGDKVGVGCMVGSCHSCGSCNNDLENYCPKMILTYS 126
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
KYHDGT TYGGYSD MV DEHFVVRIP+ PLDA APLLCAGITVYSPLRF+ LDKPGM
Sbjct: 127 TKYHDGTTTYGGYSDSMVTDEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRFFNLDKPGM 186
Query: 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP KK EA+E LGADSFLVSRDQDEMQAAM
Sbjct: 187 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKKQEALEHLGADSFLVSRDQDEMQAAM 246
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
GTMDG+IDTVSA+HP++PLI LLK+QGKLVLVGAPEKPLELP F L+MGRKIVGGS IGG
Sbjct: 247 GTMDGVIDTVSAIHPILPLISLLKTQGKLVLVGAPEKPLELPVFPLIMGRKIVGGSCIGG 306
Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
MKETQEMIDFAAK+NI ADIEVI DYVNTA+ERL+K DVRYRFVID+ NTMK
Sbjct: 307 MKETQEMIDFAAKNNITADIEVISMDYVNTAMERLSKTDVRYRFVIDIGNTMK 359
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248942|ref|NP_001240222.1| uncharacterized protein LOC100809071 [Glycine max] gi|255642037|gb|ACU21285.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 286/356 (80%), Positives = 324/356 (91%)
Query: 5 PEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA 64
PE EHPK FGWAARD+SG+LSPF+FSRR TGEKD+ FKV +CGICHSDLH++KNEWGN
Sbjct: 6 PEMEHPKKVFGWAARDSSGLLSPFNFSRRETGEKDLVFKVQYCGICHSDLHMLKNEWGNT 65
Query: 65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
YP+VPGHEI GVVTEVGSKV KFKVGD+VGVGCM+GSCRSC+SC +LENYCPK+I+TY
Sbjct: 66 TYPLVPGHEIAGVVTEVGSKVQKFKVGDRVGVGCMIGSCRSCESCDENLENYCPKMILTY 125
Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
KY DGTIT+GGYSD+MVADEHFVVRIP+ PLDA APLLCAGITVYSPLR+YGLDKPG
Sbjct: 126 GVKYFDGTITHGGYSDLMVADEHFVVRIPDNLPLDAAAPLLCAGITVYSPLRYYGLDKPG 185
Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
+++GVVGLGGLGH+AVKFAKA+G VTVISTSP+KK EAIE +GADSF+VSR+QD+MQA
Sbjct: 186 LNLGVVGLGGLGHMAVKFAKALGANVTVISTSPNKKKEAIENIGADSFVVSREQDQMQAV 245
Query: 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304
MGTMDGIIDTVSAVHPL+PLIGLLK GKLV+VGAPEKPLELP FSLLMGRK+VGGS IG
Sbjct: 246 MGTMDGIIDTVSAVHPLVPLIGLLKPHGKLVMVGAPEKPLELPVFSLLMGRKMVGGSSIG 305
Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
GMKETQEMIDFAAKH ++ DIEVIP DYVNTA+ERLAKADV+YRFVID+ NT+K +
Sbjct: 306 GMKETQEMIDFAAKHGVKPDIEVIPIDYVNTAIERLAKADVKYRFVIDIGNTLKPS 361
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359496607|ref|XP_003635278.1| PREDICTED: probable mannitol dehydrogenase-like [Vitis vinifera] gi|297741852|emb|CBI33212.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 287/359 (79%), Positives = 317/359 (88%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++ EQEHP AFGWAA DTSGVLSPF FSRR TGEKDV FKV +CGICHSDLH+ KN+
Sbjct: 1 MAKSAEQEHPTKAFGWAATDTSGVLSPFKFSRRETGEKDVRFKVLYCGICHSDLHMAKND 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG + YPIVPGHEIVG+VTEVGSKV KFKVGD+VGVGCMVG+C SCDSC DLENYCPK+
Sbjct: 61 WGTSTYPIVPGHEIVGIVTEVGSKVGKFKVGDRVGVGCMVGACHSCDSCDNDLENYCPKM 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
+ TY+ YHDGT TYGGYSD+MVA+E +VVRIP+ PLDA APLLCAGITVYSPL+ +GL
Sbjct: 121 VFTYSAPYHDGTTTYGGYSDVMVAEERYVVRIPDNLPLDAGAPLLCAGITVYSPLQHFGL 180
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
KPGMH+GVVGLGGLGHVAVKFAK GVKVTVISTSPSKK EAIE LGAD FLVSR+ D+
Sbjct: 181 TKPGMHIGVVGLGGLGHVAVKFAKGFGVKVTVISTSPSKKKEAIEHLGADYFLVSREPDQ 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
MQAAMGTMDGIIDTVSAVHPL+PLIGLLKSQGKLV+VGAP +PLELP F L+MGRK+V G
Sbjct: 241 MQAAMGTMDGIIDTVSAVHPLLPLIGLLKSQGKLVMVGAPNRPLELPVFPLIMGRKVVAG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
S IGGMKETQEMIDFA KHNI AD+EVIP DYVNTA+ERL KADVRYRFVID+ NT+KS
Sbjct: 301 SCIGGMKETQEMIDFAGKHNITADVEVIPMDYVNTAMERLEKADVRYRFVIDIGNTLKS 359
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 361 | ||||||
| TAIR|locus:2005528 | 359 | ELI3-2 "elicitor-activated gen | 0.972 | 0.977 | 0.712 | 3.3e-134 | |
| TAIR|locus:2005527 | 357 | ELI3-1 "elicitor-activated gen | 0.972 | 0.983 | 0.698 | 1.2e-131 | |
| TAIR|locus:2136278 | 360 | CAD9 "cinnamyl alcohol dehydro | 0.997 | 1.0 | 0.623 | 1.9e-122 | |
| TAIR|locus:2120968 | 363 | CAD6 "cinnamyl alcohol dehydro | 0.983 | 0.977 | 0.625 | 3.1e-122 | |
| TAIR|locus:2052516 | 376 | CAD2 "cinnamyl alcohol dehydro | 0.955 | 0.917 | 0.622 | 2.7e-116 | |
| TAIR|locus:2052494 | 375 | CAD3 "cinnamyl alcohol dehydro | 0.955 | 0.92 | 0.615 | 3.9e-115 | |
| UNIPROTKB|Q0JA75 | 379 | CAD7 "Cinnamyl alcohol dehydro | 0.988 | 0.941 | 0.568 | 3e-108 | |
| TAIR|locus:2090704 | 365 | ATCAD4 [Arabidopsis thaliana ( | 0.980 | 0.969 | 0.511 | 1.7e-91 | |
| TAIR|locus:2124311 | 357 | CAD5 "cinnamyl alcohol dehydro | 0.958 | 0.969 | 0.505 | 1.7e-91 | |
| UNIPROTKB|Q6ZHS4 | 363 | CAD2 "Cinnamyl alcohol dehydro | 0.958 | 0.953 | 0.497 | 9.6e-89 |
| TAIR|locus:2005528 ELI3-2 "elicitor-activated gene 3-2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1315 (468.0 bits), Expect = 3.3e-134, P = 3.3e-134
Identities = 250/351 (71%), Positives = 284/351 (80%)
Query: 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVP 70
K AFG AA+D SGVLSPF F+RR TGEKDV FKV CGICHSDLH++KNEWG + YP+VP
Sbjct: 7 KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVP 66
Query: 71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
GHEIVGVVTEVG+KV+KFK G+KVGVGC+V SC SCDSC +ENYCPK I TY Y+D
Sbjct: 67 GHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYD 126
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
TITYGGYSD MV +E FV+RIP+ PLDA APLLCAGITVYSP++++GLDKPGM
Sbjct: 127 NTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186
Query: 191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
KFAKAMG KVTVISTS K+ EAI RLGAD+FLVSRD +++ AMGTMDG
Sbjct: 187 GLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDG 246
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
IIDTVSA H L+PL+GLLK +GKLV+VGAPEKPLELP L+ RK+V GSMIGG+KETQ
Sbjct: 247 IIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQ 306
Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 361
EMID A KHNI ADIE+I ADYVNTA+ERL KADVRYRFVIDVANT+K P
Sbjct: 307 EMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLKPNP 357
|
|
| TAIR|locus:2005527 ELI3-1 "elicitor-activated gene 3-1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1291 (459.5 bits), Expect = 1.2e-131, P = 1.2e-131
Identities = 245/351 (69%), Positives = 282/351 (80%)
Query: 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVP 70
K AFG AA+D SG+LSPF FSRRATGEKDV FKV CGICH+DL + KNEWG YP+VP
Sbjct: 7 KEAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVP 66
Query: 71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
GHEIVGVVTEVG+KV KF GDKVGVG M GSCRSCDSC ENYCPK+I+T K D
Sbjct: 67 GHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFD 126
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
T+T+GGYSD MV E F++RIP+ PLD APLLCAG+TVYSP++++GLDKPGM
Sbjct: 127 DTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVV 186
Query: 191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
KFAKAMG KVTVISTS K+ EA+ RLGAD+FLVSRD +M+ AMGTMDG
Sbjct: 187 GLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDG 246
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
IIDTVSA HPL+PL+GLLK++GKLV+VGAP +PLELP F L+ GRK+V GSM+GG+KETQ
Sbjct: 247 IIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQ 306
Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKSTP 361
EM+D A KHNI ADIE+I ADYVNTA+ERLAKADV+YRFVIDVANTMK TP
Sbjct: 307 EMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPTP 357
|
|
| TAIR|locus:2136278 CAD9 "cinnamyl alcohol dehydrogenase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1204 (428.9 bits), Expect = 1.9e-122, P = 1.9e-122
Identities = 225/361 (62%), Positives = 274/361 (75%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++PE EHP FGW ARD SGVLSPFHFSRR GE DVT K+ CG+CH+DLH IKN+
Sbjct: 1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKND 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG + YP+VPGHEIVG+ T+VG V+KFK GD+VGVG + GSC+SC+SC DLENYCP++
Sbjct: 61 WGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQM 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
TY DGT YGGYS+ +V D+ FV+R PE P D+ APLLCAGITVYSP+++YG+
Sbjct: 121 SFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGM 180
Query: 181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
+ G K KA G+KVTVIS+S +K EAI LGADSFLV+ D +
Sbjct: 181 TEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQK 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
M+AA+GTMD IIDT+SAVH L PL+GLLK GKL+ +G PEKPLELP F L++GRK+VGG
Sbjct: 241 MKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
S +GGMKETQEM+DF AKHNI ADIE+I D +NTA+ERLAK+DVRYRFVIDVAN++ S
Sbjct: 301 SDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL-SP 359
Query: 361 P 361
P
Sbjct: 360 P 360
|
|
| TAIR|locus:2120968 CAD6 "cinnamyl alcohol dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1202 (428.2 bits), Expect = 3.1e-122, P = 3.1e-122
Identities = 222/355 (62%), Positives = 278/355 (78%)
Query: 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI 65
E+E AFGWAARD+SG LSPF FSRR TGE++V KV +CGICHSDLH +KNEW ++I
Sbjct: 7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSI 66
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP+VPGHEI+G V+E+G+KVSKF +GDKVGVGC+V SCR+C+SC D ENYC K I TY
Sbjct: 67 YPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYN 126
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
+HDGTI YGGYSD +V DE + V+IP PL + APLLCAGI++YSP++++GL P
Sbjct: 127 GVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDK 186
Query: 186 XXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
+FAKA G KVTV+S++ K +A++ LGAD FLVS D+D+M+AAM
Sbjct: 187 HVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAM 246
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
GTMDGIIDTVSA H + PLIGLLKS GKLVL+GA EKP ++ AFSL++GRK + GS IGG
Sbjct: 247 GTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGG 306
Query: 306 MKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
M+ETQEMIDFAA+H I+A+IE+I DYVNTA++RLAK DVRYRFVID++NT+ +T
Sbjct: 307 MQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAAT 361
|
|
| TAIR|locus:2052516 CAD2 "cinnamyl alcohol dehydrogenase homolog 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
Identities = 216/347 (62%), Positives = 265/347 (76%)
Query: 13 AFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGH 72
AFGWAA D SGVLSPFHFSRR GE DVT K+ CG+CHSDLH IKN WG + YPI+PGH
Sbjct: 7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66
Query: 73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
EIVG+ T+VG V+KFK GD+VGVG ++GSC+SC+SC DLENYCPKV+ TY ++ DGT
Sbjct: 67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126
Query: 133 I-TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXX 190
GGYSD++V D FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K G
Sbjct: 127 SRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVN 186
Query: 191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
K KA G++VTVIS S K+ EAI+RLGADSFLV+ D +M+ A+GTMD
Sbjct: 187 GLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDF 246
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
IIDTVSA H L+PL LLK GKLV +G PEKPL+LP FSL++GRK+VGGS IGGMKETQ
Sbjct: 247 IIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQ 306
Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
EM++F AKH I +DIE+I +N+A++RLAK+DVRYRFVIDVAN++
Sbjct: 307 EMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353
|
|
| TAIR|locus:2052494 CAD3 "cinnamyl alcohol dehydrogenase homolog 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
Identities = 213/346 (61%), Positives = 262/346 (75%)
Query: 13 AFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGH 72
AFGWAA D SGVLSPFHFSRR GE DVT K+ CG+CHSDLH IKN WG + YPI+PGH
Sbjct: 7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66
Query: 73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
EIVG+ T+VG V+KFK GD+VGVG ++GSC+SC+SC DLENYCPKV+ TY ++ DGT
Sbjct: 67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126
Query: 133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP-GMXXXXXX 191
GGYSD++V D FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K G
Sbjct: 127 RNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNG 186
Query: 192 XXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
K KA G++VTVIS S K+ EAI+RLGADSFLV+ D +M+ A+GTMD I
Sbjct: 187 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 246
Query: 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE 311
IDTVSA H L+PL LLK GKLV +G EKPL+LP F L++GRK+VGGS IGGMKETQE
Sbjct: 247 IDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQE 306
Query: 312 MIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
M++F AKH I +DIE+I +N+A++RL K+DVRYRFVIDVAN++
Sbjct: 307 MLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352
|
|
| UNIPROTKB|Q0JA75 CAD7 "Cinnamyl alcohol dehydrogenase 7" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 1070 (381.7 bits), Expect = 3.0e-108, P = 3.0e-108
Identities = 208/366 (56%), Positives = 259/366 (70%)
Query: 3 QAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG 62
QAP +H + A G AA D SG L+P SRR TG+ DV KV +CGICHSDLH IKNEW
Sbjct: 13 QAPPPQHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWR 72
Query: 63 NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK-VI 121
NA+YP+V GHEI GVVTEVG V++FK GD+VGVGCMV +C C+SC ENYC V+
Sbjct: 73 NAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVV 132
Query: 122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT--------PLDATAPLLCAGITVYS 173
TY + DGT TYGGYSD +V + FVVR P PLD+ APLLCAG+TVY+
Sbjct: 133 FTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYA 192
Query: 174 PLRFYGLDKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL 233
P+R +GL + G KFA+A G++VTVISTSP K+ EA+ERLGAD F+
Sbjct: 193 PMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFI 252
Query: 234 VSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
VS + EM+AAMGTM GII+T SA + + LLK +GK++LVG PEKPL++P F+L+
Sbjct: 253 VSTNASEMKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVG 312
Query: 294 GRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353
G KI+ GS +G + ETQEMIDFAA+H + ADIE+I AD VNTA+ERLAK DVRYRFV+D+
Sbjct: 313 GGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDI 372
Query: 354 ANTMKS 359
NT++S
Sbjct: 373 GNTLRS 378
|
|
| TAIR|locus:2090704 ATCAD4 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 182/356 (51%), Positives = 233/356 (65%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
MG E K A GWAARD SGVLSP+ ++ R+TG DV KV CGICH+D+H IKN+
Sbjct: 1 MGSVEAGE--KKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKND 58
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
G + YP+VPGHE+VG V EVGS VSKF VGD VGVG +VG C SC C+ +LE YC K
Sbjct: 59 LGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKR 118
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I +Y + Y DG T GG++D M+ ++ FVV+IPEG ++ APLLCAG+TVYSPL +GL
Sbjct: 119 IWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGL 178
Query: 181 DKPGMXXXXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
G+ K AKAMG VTVIS+S KK EAIE LGAD ++VS D E
Sbjct: 179 MASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAE 238
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
MQ ++D IIDTV HPL P + LK GKL+L+G PL+ +++GRK++ G
Sbjct: 239 MQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISG 298
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 356
S IG +KET+E++ F + + + IE + D +N A ERL K DVRYRFV+DVA +
Sbjct: 299 SFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354
|
|
| TAIR|locus:2124311 CAD5 "cinnamyl alcohol dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 175/346 (50%), Positives = 229/346 (66%)
Query: 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP 67
E + GWAARD SG+LSP+ ++ R TG +DV ++ CGICH+DLH KN+ G + YP
Sbjct: 5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64
Query: 68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
+VPGHE+VG V EVGS VSKF VGD VGVGC+VG C C C DLE YCPK I +Y +
Sbjct: 65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXX 187
Y +G T GG++ V + FVV+IPEG ++ APLLCAG+TVYSPL +GL +PG+
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184
Query: 188 XXXXXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
K AKAMG VTVIS+S K+ EA++ LGAD +++ DQ +M +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307
+D +IDTV H L P + LLK GKL+L+G PL+ L++GRK++ GS IG MK
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMK 304
Query: 308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353
ET+EM++F + + + IEV+ DYVNTA ERL K DVRYRFV+DV
Sbjct: 305 ETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDV 350
|
|
| UNIPROTKB|Q6ZHS4 CAD2 "Cinnamyl alcohol dehydrogenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 172/346 (49%), Positives = 229/346 (66%)
Query: 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVP 70
K GWAARD SG L+P++++ R TG +DV KV +CGICH+D+H KN G + YP+VP
Sbjct: 8 KTVTGWAARDASGHLTPYNYTLRKTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVP 67
Query: 71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD 130
GHE+VG V EVG +V+K+ GD VGVG +VG CR C C ++E YC K I +Y + Y D
Sbjct: 68 GHEVVGEVVEVGPEVTKYSAGDVVGVGVIVGCCRECHPCKANVEQYCNKRIWSYNDVYTD 127
Query: 131 GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMXXXXX 190
G T GG++ MV D+ FVV+IP G + APLLCAG+TVYSPL+ +GL PG+
Sbjct: 128 GRPTQGGFASAMVVDQKFVVKIPAGLAPEQAAPLLCAGLTVYSPLKHFGLMSPGLRGGVL 187
Query: 191 XXXXXXXXXXKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
K AK+MG VTVIS+S K+ EA++ LGAD++LVS D M AA ++D
Sbjct: 188 GLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDY 247
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
IIDTV HPL P + LLK GKL+L+G +PL + +++GRK + GS IG M ET+
Sbjct: 248 IIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETE 307
Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 356
E+++F + + IEV+ DYVN ALERL + DVRYRFV+DVA +
Sbjct: 308 EVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGS 353
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P0A4X1 | ADHC_MYCBO | 1, ., 1, ., 1, ., 2 | 0.4882 | 0.9335 | 0.9739 | yes | no |
| P0A4X0 | ADHC_MYCTU | 1, ., 1, ., 1, ., 2 | 0.4882 | 0.9335 | 0.9739 | yes | no |
| P42754 | MTDH_PETCR | 1, ., 1, ., 1, ., 2, 5, 5 | 0.7440 | 0.9307 | 0.9970 | N/A | no |
| C0SPA5 | ADHA_BACSU | 1, ., 1, ., 1, ., - | 0.5107 | 0.8919 | 0.9226 | yes | no |
| P42495 | CADH1_ARACO | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5485 | 0.9667 | 0.9694 | N/A | no |
| P30360 | CADH2_TOBAC | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5462 | 0.9584 | 0.9691 | N/A | no |
| O82035 | CADH2_PICAB | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5530 | 0.9667 | 0.9775 | N/A | no |
| Q42726 | CADH1_EUCGU | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5272 | 0.9612 | 0.9802 | N/A | no |
| P93257 | MTDH_MESCR | 1, ., 1, ., 1, ., 2, 5, 5 | 0.7724 | 0.9861 | 0.9861 | N/A | no |
| Q08350 | CADH7_PICAB | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5533 | 0.9612 | 0.9719 | N/A | no |
| P31657 | CADH_POPDE | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5358 | 0.9667 | 0.9775 | N/A | no |
| P31656 | CADH_MEDSA | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5173 | 0.9584 | 0.9664 | N/A | no |
| P31655 | CADH2_EUCGU | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5358 | 0.9667 | 0.9803 | N/A | no |
| P0CH37 | ADHC2_MYCS2 | 1, ., 1, ., 1, ., 2 | 0.5467 | 0.9362 | 0.9684 | yes | no |
| P30359 | CADH1_TOBAC | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5549 | 0.9584 | 0.9691 | N/A | no |
| Q337Y2 | CADH3_ORYSJ | 1, ., 1, ., 1, ., 1, 9, 5 | 0.6532 | 0.9667 | 0.9535 | yes | no |
| Q43138 | MTDH3_STYHU | 1, ., 1, ., 1, ., 2, 5, 5 | 0.6918 | 0.9806 | 0.9752 | N/A | no |
| O64969 | CADH_EUCGL | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5386 | 0.9667 | 0.9803 | N/A | no |
| P50746 | CADH_EUCBO | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5329 | 0.9639 | 0.9802 | N/A | no |
| Q2KNL5 | CADH1_OCIBA | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5329 | 0.9667 | 0.9775 | N/A | no |
| Q2KNL6 | GEDH1_OCIBA | 1, ., 1, ., 1, ., 1, 8, 3 | 0.7011 | 0.9916 | 0.9944 | N/A | no |
| Q43137 | MTDH1_STYHU | 1, ., 1, ., 1, ., 2, 5, 5 | 0.6436 | 0.9612 | 0.9802 | N/A | no |
| P0CH36 | ADHC1_MYCS2 | 1, ., 1, ., 1, ., 2 | 0.5467 | 0.9362 | 0.9684 | yes | no |
| P41637 | CADH_PINTA | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5472 | 0.9667 | 0.9775 | N/A | no |
| Q9ZRF1 | MTDH_FRAAN | 1, ., 1, ., 1, ., 2, 5, 5 | 0.8084 | 0.9833 | 0.9888 | N/A | no |
| O82515 | MTDH_MEDSA | 1, ., 1, ., 1, ., 2, 5, 5 | 0.6657 | 0.9916 | 0.9972 | N/A | no |
| Q6V4H0 | 10HGO_CATRO | 1, ., 1, ., 1, ., 3, 2, 4 | 0.7688 | 0.9944 | 0.9972 | N/A | no |
| Q40976 | CADH_PINRA | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5444 | 0.9667 | 0.9775 | N/A | no |
| O22380 | CADH_LOLPR | 1, ., 1, ., 1, ., 1, 9, 5 | 0.5224 | 0.9806 | 0.9806 | N/A | no |
| Q38707 | MTDH_APIGR | 1, ., 1, ., 1, ., 2, 5, 5 | 0.6963 | 0.9944 | 0.9835 | N/A | no |
| Q02972 | CADH8_ARATH | 1, ., 1, ., 1, ., 1, 9, 5 | 0.7492 | 0.9722 | 0.9777 | yes | no |
| Q02971 | CADH7_ARATH | 1, ., 1, ., 1, ., 1, 9, 5 | 0.7257 | 0.9889 | 1.0 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.983 |
| 4th Layer | 1.1.1.195 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 361 | |||
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 0.0 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 0.0 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 1e-174 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 1e-161 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 1e-145 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 1e-125 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 1e-81 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 1e-79 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 2e-69 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 3e-59 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 2e-55 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 8e-54 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 6e-53 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 4e-46 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 1e-38 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 4e-38 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 6e-37 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 1e-36 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 6e-34 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 2e-33 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 1e-32 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 2e-32 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 2e-32 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 1e-31 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 7e-31 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 4e-30 | |
| pfam08240 | 108 | pfam08240, ADH_N, Alcohol dehydrogenase GroES-like | 6e-30 | |
| TIGR02822 | 329 | TIGR02822, adh_fam_2, zinc-binding alcohol dehydro | 1e-29 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 5e-29 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 2e-28 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 2e-28 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 2e-28 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 7e-28 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 1e-27 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 5e-26 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 5e-25 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 7e-25 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 2e-24 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 3e-23 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 1e-22 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 4e-22 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 7e-22 | |
| cd08232 | 339 | cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | 1e-21 | |
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 1e-21 | |
| cd08299 | 373 | cd08299, alcohol_DH_class_I_II_IV, class I, II, IV | 3e-21 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 4e-21 | |
| cd08286 | 345 | cd08286, FDH_like_ADH2, formaldehyde dehydrogenase | 2e-19 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 1e-18 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 1e-18 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 3e-18 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 5e-18 | |
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 7e-18 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 1e-17 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 2e-17 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 2e-17 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 2e-16 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 2e-16 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 2e-16 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 4e-16 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 4e-16 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 4e-16 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 1e-15 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 1e-15 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 3e-15 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 5e-15 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 1e-14 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 2e-14 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 2e-14 | |
| PLN02740 | 381 | PLN02740, PLN02740, Alcohol dehydrogenase-like | 3e-14 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 3e-14 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 3e-14 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 6e-14 | |
| cd08262 | 341 | cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD | 7e-14 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 8e-14 | |
| TIGR00692 | 340 | TIGR00692, tdh, L-threonine 3-dehydrogenase | 1e-13 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 1e-13 | |
| cd08287 | 345 | cd08287, FDH_like_ADH3, formaldehyde dehydrogenase | 2e-13 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 2e-13 | |
| cd08265 | 384 | cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD | 3e-13 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 4e-13 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 5e-13 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 7e-13 | |
| PRK05396 | 341 | PRK05396, tdh, L-threonine 3-dehydrogenase; Valida | 1e-12 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 2e-12 | |
| PRK10083 | 339 | PRK10083, PRK10083, putative oxidoreductase; Provi | 3e-12 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 9e-12 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 2e-11 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 3e-11 | |
| PLN02827 | 378 | PLN02827, PLN02827, Alcohol dehydrogenase-like | 5e-11 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 5e-11 | |
| PRK09880 | 343 | PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro | 7e-11 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 1e-10 | |
| cd08289 | 326 | cd08289, MDR_yhfp_like, Yhfp putative quinone oxid | 1e-10 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 6e-10 | |
| cd08248 | 350 | cd08248, RTN4I1, Human Reticulon 4 Interacting Pro | 2e-09 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 2e-09 | |
| cd08256 | 350 | cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD | 2e-09 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 1e-08 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 2e-08 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 2e-08 | |
| TIGR01202 | 308 | TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter | 6e-08 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 3e-07 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 4e-07 | |
| TIGR02817 | 336 | TIGR02817, adh_fam_1, zinc-binding alcohol dehydro | 7e-07 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 8e-07 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 1e-06 | |
| TIGR02819 | 393 | TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas | 2e-06 | |
| TIGR02823 | 323 | TIGR02823, oxido_YhdH, putative quinone oxidoreduc | 5e-06 | |
| cd08288 | 324 | cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu | 1e-05 | |
| cd05300 | 313 | cd05300, 2-Hacid_dh_1, Putative D-isomer specific | 3e-05 | |
| cd08270 | 305 | cd08270, MDR4, Medium chain dehydrogenases/reducta | 4e-05 | |
| pfam02826 | 175 | pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro | 5e-05 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 2e-04 | |
| PRK13243 | 333 | PRK13243, PRK13243, glyoxylate reductase; Reviewed | 6e-04 | |
| cd05198 | 302 | cd05198, formate_dh_like, Formate/glycerate and re | 8e-04 | |
| cd12178 | 317 | cd12178, 2-Hacid_dh_13, Putative D-isomer specific | 0.001 | |
| COG0111 | 324 | COG0111, SerA, Phosphoglycerate dehydrogenase and | 0.002 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 588 bits (1516), Expect = 0.0
Identities = 251/357 (70%), Positives = 302/357 (84%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++PE+EHP+ AFGWAARD SGVLSPFHFSRR G++DVT K+ +CG+CHSDLH IKNE
Sbjct: 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNE 60
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG YPIVPGHEIVG+VT++G V KFK GD+VGVG +VGSC+SC+SC DLENYCPK+
Sbjct: 61 WGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKM 120
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I TY + HDGT YGGYSD++V D+HFV+R P+ PLDA APLLCAGITVYSP+++YG+
Sbjct: 121 IFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGM 180
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
+PG H+GV GLGGLGHVAVK KA G+KVTVIS+S +K+ EAI RLGADSFLVS D ++
Sbjct: 181 TEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK 240
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
M+AA+GTMD IIDTVSAVH L PL+GLLK GKL+ +G PEKPLELP F L++GRK+VGG
Sbjct: 241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGG 300
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
S IGG+KETQEM+DF AKHNI ADIE+I D +NTA+ERLAK+DVRYRFVIDVAN++
Sbjct: 301 SDIGGIKETQEMLDFCAKHNITADIELIRMDEINTAMERLAKSDVRYRFVIDVANSL 357
|
Length = 360 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 567 bits (1464), Expect = 0.0
Identities = 212/339 (62%), Positives = 255/339 (75%), Gaps = 2/339 (0%)
Query: 14 FGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHE 73
G+AARD SG L PF F RR G DV K+T+CG+CHSDLH ++NEWG YP+VPGHE
Sbjct: 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60
Query: 74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
IVG+V VGSKV+KFKVGD+VGVGC V SC +C+ C E YCPK ++TY KY DGTI
Sbjct: 61 IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTI 120
Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
T GGY+D +V DE FV +IPEG A APLLCAGITVYSPL+ G+ PG VGVVG+G
Sbjct: 121 TQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGV-GPGKRVGVVGIG 179
Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
GLGH+AVKFAKA+G +VT S SPSKK +A +LGAD F+ ++D + M+ A G++D IID
Sbjct: 180 GLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIID 238
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMI 313
TVSA H L P + LLK G LVLVGAPE+PL +P F L+ GRK V GS+IGG KETQEM+
Sbjct: 239 TVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEML 298
Query: 314 DFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVID 352
DFAA+H I+ +EVIP D +N ALERL K DVRYRFV+D
Sbjct: 299 DFAAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVLD 337
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 490 bits (1262), Expect = e-174
Identities = 226/346 (65%), Positives = 277/346 (80%), Gaps = 1/346 (0%)
Query: 13 AFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGH 72
AFGWAA D SGVLSPFHFSRR GE DVT K+ CG+CHSDLH IKN WG + YPI+PGH
Sbjct: 7 AFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGH 66
Query: 73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT 132
EIVG+ T+VG V+KFK GD+VGVG ++GSC+SC+SC DLENYCPKV+ TY ++ DGT
Sbjct: 67 EIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGT 126
Query: 133 ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVG 191
GGYSD++V D FV+ IP+G P D+ APLLCAGITVYSP+++YG+ K G +GV G
Sbjct: 127 RNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNG 186
Query: 192 LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
LGGLGH+AVK KA G++VTVIS S K+ EAI+RLGADSFLV+ D +M+ A+GTMD I
Sbjct: 187 LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFI 246
Query: 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE 311
IDTVSA H L+PL LLK GKLV +G PEKPL+LP F L++GRK+VGGS IGGMKETQE
Sbjct: 247 IDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQE 306
Query: 312 MIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
M++F AKH I +DIE+I +N+A++RLAK+DVRYRFVIDVAN++
Sbjct: 307 MLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 352
|
Length = 375 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 455 bits (1173), Expect = e-161
Identities = 196/347 (56%), Positives = 244/347 (70%)
Query: 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP 67
E K GWAARD SG LSP+ ++ R TG +DV KV +CGICH+DLH IKN+ G + YP
Sbjct: 5 EAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYP 64
Query: 68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
+VPGHE+VG V EVGS VSKF VGD VGVG +VG C C C DLE YC K I +Y +
Sbjct: 65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDV 124
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
Y DG T GG++ MV D+ FVV+IPEG + APLLCAG+TVYSPL +GL + G+
Sbjct: 125 YTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRG 184
Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
G++GLGG+GH+ VK AKAMG VTVIS+S K+ EA+E LGAD +LVS D EMQ A +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADS 244
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307
+D IIDTV HPL P + LLK GKL+L+G PL+ L++GRK++ GS IG MK
Sbjct: 245 LDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMK 304
Query: 308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354
ET+EM++F + + + IEV+ DYVNTA ERL K DVRYRFV+DVA
Sbjct: 305 ETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVA 351
|
Length = 357 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 414 bits (1067), Expect = e-145
Identities = 155/339 (45%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 16 WAARDTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHE 73
AA + G L P G +V K+ CG+CH+DLH + +WG + YP+VPGHE
Sbjct: 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60
Query: 74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
IVG V EVG+ V KVGD+VGVG +VGSC C+ C LEN C K + T G
Sbjct: 61 IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYT 113
Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
T GGY++ MVAD + V +P+G PL APLLCAGITVYS LR G +PG V V+G+G
Sbjct: 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRDAGP-RPGERVAVLGIG 172
Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIID 253
GLGH+AV++A+AMG + I+ SP K+ A +LGAD + S + + QAA G D I+
Sbjct: 173 GLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAELDEQAAAGGADVILV 231
Query: 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEM 312
TV + +G L+ G++VLVG PE P P F L+M R+ + GS GG + QE
Sbjct: 232 TVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEA 291
Query: 313 IDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVI 351
+DFAA+ ++ IE P D N A ER+ K DVR+RFV+
Sbjct: 292 LDFAAEGKVKPMIETFPLDQANEAYERMEKGDVRFRFVL 330
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 364 bits (936), Expect = e-125
Identities = 147/341 (43%), Positives = 192/341 (56%), Gaps = 13/341 (3%)
Query: 15 GWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEI 74
+ L G +V KV CG+CH+DLH+ K +W P++PGHEI
Sbjct: 6 AAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEI 65
Query: 75 VGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTIT 134
VG V EVG V+ KVGD+VGVG +V SC C+ C EN CP +T G T
Sbjct: 66 VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTT 118
Query: 135 YGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG 194
GGY++ +V +VV+IPEG L APLLCAGIT Y L+ + KPG V VVG GG
Sbjct: 119 DGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANV-KPGKWVAVVGAGG 177
Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
LGH+AV++AKAMG +V I+ S K A ++LGAD + S D D ++A D IIDT
Sbjct: 178 LGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVINSSDSDALEAVKEIADAIIDT 236
Query: 255 VSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
V L P + L+ G LVLVG P LPAF L++ + GS++G + +E
Sbjct: 237 VGP-ATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEA 295
Query: 313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352
+DFAA+ I+ +I E IP D +N A ER+ K VR R VID
Sbjct: 296 LDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVID 336
|
Length = 339 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 251 bits (644), Expect = 1e-81
Identities = 118/324 (36%), Positives = 176/324 (54%), Gaps = 17/324 (5%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV CG+CHSD + + YP VPGHE+VG + VG VS++KVGD
Sbjct: 21 PLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-GGYSDIMVADEHFVVR 151
+VGVG G C +CD+C +C N G +T GGY++ M+A + R
Sbjct: 81 RVGVGWHGGHCGTCDACRRGDFVHC-------ENGKVTG-VTRDGGYAEYMLAPAEALAR 132
Query: 152 IPEGTPLDAT--APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 209
IP+ LDA APLLCAG+T ++ LR G KPG V V G+GGLGH+AV++A MG +
Sbjct: 133 IPDD--LDAAEAAPLLCAGVTTFNALRNSGA-KPGDLVAVQGIGGLGHLAVQYAAKMGFR 189
Query: 210 VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA--AMGTMDGIIDTVSAVHPLMPLIGL 267
IS K A + LGA ++ + +D +A +G I+ T + L+G
Sbjct: 190 TVAISRGSDKADLARK-LGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGG 248
Query: 268 LKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV 327
L +GKL+++GA +P+ + L+MGRK + G G ++++ + F+A H +R +E
Sbjct: 249 LAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVET 308
Query: 328 IPADYVNTALERLAKADVRYRFVI 351
P + N A +R+ R+R V+
Sbjct: 309 FPLEKANEAYDRMMSGKARFRVVL 332
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 247 bits (632), Expect = 1e-79
Identities = 113/327 (34%), Positives = 170/327 (51%), Gaps = 19/327 (5%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G +V K+ G+CH+DLH +W P++ GHE GVV VG VS KVGD+V
Sbjct: 25 GPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRV 84
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
GV + +C C+ C E CP + G G +++ +AD +V IP+
Sbjct: 85 GVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPD 137
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVI 213
G + APLLCAG+TVY L+ GL KPG V + G GG LGH+ V++AKAMG++V I
Sbjct: 138 GLSFEQAAPLLCAGVTVYKALKKAGL-KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAI 196
Query: 214 STSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM--DGIIDTVSAVHPLMPLIGLL 268
K E + LGAD+F+ + D ++ G ++ T + + L
Sbjct: 197 DVGDEKL-ELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYL 255
Query: 269 KSQGKLVLVGAPEK-PLELPAFSL-LMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE 326
+ G LV VG P + L F L L G IV GS++G ++ QE ++FAA+ ++ I+
Sbjct: 256 RPGGTLVCVGLPPGGFIPLDPFDLVLRGITIV-GSLVGTRQDLQEALEFAARGKVKPHIQ 314
Query: 327 VIPADYVNTALERLAKADVRYRFVIDV 353
V+P + +N E++ + + R V+D
Sbjct: 315 VVPLEDLNEVFEKMEEGKIAGRVVVDF 341
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 220 bits (562), Expect = 2e-69
Identities = 105/327 (32%), Positives = 154/327 (47%), Gaps = 14/327 (4%)
Query: 25 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSK 84
L G +V KV CG+C +DLH+++ + P++PGHEIVG V VG
Sbjct: 17 LRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPG 76
Query: 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVA 144
V++F VGD+VGV + +C C C EN C T G GGY++ MVA
Sbjct: 77 VTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVA 129
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
DE F IPE + APLLCAGI Y L+ GL KPG +G+ G G H+A++ A+
Sbjct: 130 DERFAYPIPEDYDDEEAAPLLCAGIIGYRALKLAGL-KPGQRLGLYGFGASAHLALQIAR 188
Query: 205 AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264
G +V + S + A E LGAD S D +D I +
Sbjct: 189 YQGAEVFAFTRSGEHQELARE-LGADWAGDSDDLPP-----EPLDAAIIFAPVGALVPAA 242
Query: 265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD 324
+ +K G++VL G + + LL G K + ++ +E + AA+ I+ +
Sbjct: 243 LRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPE 302
Query: 325 IEVIPADYVNTALERLAKADVRYRFVI 351
+E P + N AL+ L + +R V+
Sbjct: 303 VETYPLEEANEALQDLKEGRIRGAAVL 329
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 194 bits (495), Expect = 3e-59
Identities = 105/323 (32%), Positives = 145/323 (44%), Gaps = 21/323 (6%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNA---IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
V +V G+CHSDLH+I WG P GHE G V EVGS V K GD V
Sbjct: 27 QVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVV 86
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
V G C +C C ENYC T GG+++ ++ +V++P G
Sbjct: 87 VHPPWG-CGTCRYCRRGEENYCENARFPGIG-------TDGGFAEYLLVPSRRLVKLPRG 138
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVI 213
APL AG+T Y ++ PG V V+G+GGLGH+AV+ +A+ V +
Sbjct: 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAV 198
Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLL 268
S A ERLGAD L + D D ++ G +ID V + L LL
Sbjct: 199 DRSEEALKLA-ERLGADHVLNASD-DVVEEVRELTGGRGADAVIDFVGSDETLALAAKLL 256
Query: 269 KSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVI 328
G+ V+VG LP L+ V GS+ G E E++ A ++ +I
Sbjct: 257 AKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEITKF 315
Query: 329 PADYVNTALERLAKADVRYRFVI 351
P + N AL+RL + V R V+
Sbjct: 316 PLEDANEALDRLREGRVTGRAVL 338
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 2e-55
Identities = 103/332 (31%), Positives = 146/332 (43%), Gaps = 27/332 (8%)
Query: 38 KDVTFKVTHCGICHSDLHLIKNEW--GN----------AIYPIVPGHEIVGVVTEVGSKV 85
+V KVT CG+CHSDLH+ + G P+V GHEIVG V VG
Sbjct: 26 TEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDA 85
Query: 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD 145
+ KVGDKV V +G C C C EN C K G GGY++ ++
Sbjct: 86 ADVKVGDKVLVYPWIG-CGECPVCLAGDENLCAK-------GRALGIFQDGGYAEYVIVP 137
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
+ P G A L C+G+T YS ++ V ++G GGLG +A+ KA
Sbjct: 138 HSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKA 197
Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSAVHP 260
+G + V+ +K A GAD + D D ++AA G +D +ID V+
Sbjct: 198 LGPANIIVVDIDEAKLEAAKAA-GADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSAT 256
Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320
+L GKLVLVG LP L + + GS +G ++E +E++ A
Sbjct: 257 ASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGK 316
Query: 321 I-RADIEVIPADYVNTALERLAKADVRYRFVI 351
+ + P VN AL+ L V R V+
Sbjct: 317 LKPIPLTERPLSDVNDALDDLKAGKVVGRAVL 348
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 178 bits (453), Expect = 8e-54
Identities = 86/283 (30%), Positives = 135/283 (47%), Gaps = 19/283 (6%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
+V +V G+C +DLH+ + + P++ GHE GVV EVG V+ KVGD+V V
Sbjct: 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157
+G C +C+ C G GG+++ +V +V +P+G
Sbjct: 61 PNLG-CGTCELCR-----------ELCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLS 108
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217
L+ A L T Y LR G+ KPG V V+G GG+G +A + AKA G +V V S
Sbjct: 109 LEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSD 168
Query: 218 SKKSEAIERLGADSFLVSRDQDEMQAAMGT----MDGIIDTVSAVHPLMPLIGLLKSQGK 273
K E + LGAD + +++D + T D +ID V L + LL+ G+
Sbjct: 169 EKL-ELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227
Query: 274 LVLVGAPEKPLELPAFSLLMGRKI-VGGSMIGGMKETQEMIDF 315
+V+VG L L+ +++ + GS G ++ +E +D
Sbjct: 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 177 bits (452), Expect = 6e-53
Identities = 106/329 (32%), Positives = 145/329 (44%), Gaps = 28/329 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNE-WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G +V KV G+CHSDLH++ P+ GHEI G V EVG+ V+ FKVGD+V
Sbjct: 25 GPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRV 84
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
V V C +C C N C M G GG+++ +V +V +P+
Sbjct: 85 AV-PAVIPCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPD 136
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214
G P A A +T Y + G KPG V V+GLGGLG AV+ AKAMG V +
Sbjct: 137 GVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVD 196
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV-----------SAVHPLMP 263
K A E LGAD L S D + G D + A
Sbjct: 197 IKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQK---- 251
Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 323
+K G++V+VG L + L+ + GS G ++ E++D AK +
Sbjct: 252 ---AVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDP 308
Query: 324 DIEVIPADYVNTALERLAKADVRYRFVID 352
+E P D + LERL K V+ R V+
Sbjct: 309 QVETRPLDEIPEVLERLHKGKVKGRVVLV 337
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 4e-46
Identities = 95/321 (29%), Positives = 153/321 (47%), Gaps = 16/321 (4%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V KV G+C+ DL K + YP++ GHEIVG V EVG V +FK GD+V
Sbjct: 24 GPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVI 83
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
+ + C C+ C EN C N+ G GG+++ + E +V++P+
Sbjct: 84 LYYYIP-CGKCEYCLSGEENLCR-------NRAEYGEEVDGGFAEYVKVPERSLVKLPDN 135
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS 214
++ A C T L+ G+ K G V V G GG+G A++ AKA+G +V ++
Sbjct: 136 VSDESAALAACVVGTAVHALKRAGV-KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVT 194
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
SP K + ++ LGAD + E +G D +I+ V + + + L G+L
Sbjct: 195 RSPEKL-KILKELGADYVIDGSKFSEDVKKLGGADVVIELVGS-PTIEESLRSLNKGGRL 252
Query: 275 VLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE-VIPAD 331
VL+G P+ P +L +I+ GS+ + +E + + I+ I+ V+ +
Sbjct: 253 VLIGNVTPDPAPLRPGLLILKEIRII-GSISATKADVEEALKLVKEGKIKPVIDRVVSLE 311
Query: 332 YVNTALERLAKADVRYRFVID 352
+N ALE L V R V+
Sbjct: 312 DINEALEDLKSGKVVGRIVLK 332
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 1e-38
Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 19/301 (6%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G DV +VT GIC SDLH+ + E I+ GHE VG V EVG V FKVGD+V
Sbjct: 24 GPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVGV-VRGFKVGDRV 82
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-IMVADEHFVVRIP 153
V + C C C N C + G GG+++ + V + + ++P
Sbjct: 83 VVEPNI-PCGHCRYCRAGEYNLCEN--PGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLP 139
Query: 154 EGTPLDATA--PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KV 210
+G +A A L ++ +PG V VVG G +G +A+ AK +G V
Sbjct: 140 DGIDEEAAALTEPLATAYHGHA---ERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVV 196
Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
V+ SP + A E GAD + + D + G +I+ V + L +
Sbjct: 197 IVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQAL 256
Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGRK--IVGGSMIGGMKETQEMIDFAAKHNIRA 323
L+ G +V+VG L++ ++ + G G ++ + +D A I
Sbjct: 257 EALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDP 316
Query: 324 D 324
+
Sbjct: 317 E 317
|
Length = 350 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 4e-38
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 24/291 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V ++ G+CHSDLH++ + P V GHE GVV EVG V+ K GD V
Sbjct: 24 GPGEVLVRIAAAGLCHSDLHVVTGDLPAP-LPAVLGHEGAGVVEEVGPGVTGVKPGDHV- 81
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-------------ITYGGYSDIM 142
V + +C +C C+ N C + DGT G +++
Sbjct: 82 VLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYT 141
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 202
V E VV+I + PLD A L C T + +PG V V+G GG+G A++
Sbjct: 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQG 201
Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTVS 256
A+ G ++ + P K A R GA + + + D ++A DG + V
Sbjct: 202 ARIAGASRIIAVDPVPEKLELAR-RFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVG 260
Query: 257 AVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGG 305
+ + + + G V+VG P + + LPA L + K + GS+ G
Sbjct: 261 RAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 6e-37
Identities = 89/317 (28%), Positives = 161/317 (50%), Gaps = 19/317 (5%)
Query: 43 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
K+ +CG+CH+DLH+ ++G+ + GHE +G+V EVG V+ KVGD+V +
Sbjct: 31 KMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEG 89
Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD--IMVADEHFVVRIPEGTPLDA 160
C C+ C E C V + G GG ++ I+ AD + V++PEG
Sbjct: 90 CGHCEYCTTGRETLCRSVK-------NAGYTVDGGMAEQCIVTAD--YAVKVPEGLDPAQ 140
Query: 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSK 219
+ + CAG+T Y ++ G+ KPG + + G GGLG++A+++AK KV + + K
Sbjct: 141 ASSITCAGVTTYKAIKVSGI-KPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDK 199
Query: 220 KSEAIERLGADSFLVSRDQD----EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
+ A E +GAD + S+ + +Q G + T A + +++ G++V
Sbjct: 200 LALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVV 258
Query: 276 LVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNT 335
VG P + ++L L++ V GS++G ++ +E F A+ + +++ P + +N
Sbjct: 259 AVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRPLEDIND 318
Query: 336 ALERLAKADVRYRFVID 352
+ + + ++ R VID
Sbjct: 319 IFDEMEQGKIQGRMVID 335
|
Length = 338 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 1e-36
Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 32/335 (9%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V ++T G+CH+D H + + +P V GHE G+V VG V+ K GD V +
Sbjct: 29 EVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPGDHV-ILL 86
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMT-YANKYHDGTITY-------------GGYSDIMVA 144
C C C N C + T DGT +++ V
Sbjct: 87 FTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVV 146
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
E +V+I PL+ L C T + +PG V V GLGG+G A++ AK
Sbjct: 147 HEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAK 206
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAV 258
A G ++ + +P K A ++ GA F+ ++ D++ A+ G D + V V
Sbjct: 207 AAGAGRIIAVDINPEKLELA-KKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNV 265
Query: 259 HPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMIGGMK---ETQEMI 313
+ + G V++G + + F L+ GR GS GG + + ++
Sbjct: 266 EVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWK-GSAFGGARPRSDIPRLV 324
Query: 314 DFAAKHNIRAD---IEVIPADYVNTALERLAKADV 345
D + D IP + +N A + + +
Sbjct: 325 DLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKS 359
|
Length = 366 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 128 bits (323), Expect = 6e-34
Identities = 97/347 (27%), Positives = 153/347 (44%), Gaps = 33/347 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV---SKFKVGD 92
E ++ +V CG+CHSDLH++K E P V GHEI G V EVG V VGD
Sbjct: 24 KEGEILIRVAACGVCHSDLHVLKGELPFPP-PFVLGHEISGEVVEVGPNVENPYGLSVGD 82
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK--YHDGTI-------------TYGG 137
+V VG + C C CA EN C K +DGT + GG
Sbjct: 83 RV-VGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGG 141
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 197
++ V + +PE +A L CAG T Y L+ +PG V V+G+GG+G
Sbjct: 142 LAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGS 201
Query: 198 VAVKFAKAMGVKVTV-ISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM--DGI 251
A++ AKA G + + K ++A E LGA + + +D ++ G D +
Sbjct: 202 SAIQLAKAFGASPIIAVDVRDEKLAKAKE-LGATHTVNAAKEDAVAAIREITGGRGVDVV 260
Query: 252 IDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLM-GRKIVGGSMIGGMKE 308
++ + + +++ G+ V+VG E+P L+ G KI+G ++
Sbjct: 261 VEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQD 320
Query: 309 TQEMIDFAAKHNIRADIEV---IPADYVNTALERLAKADVRYRFVID 352
E++ AA + + V + +N A E L K + R +++
Sbjct: 321 LPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 2e-33
Identities = 87/323 (26%), Positives = 148/323 (45%), Gaps = 20/323 (6%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G+ +V KV + G+C+ DL ++ + YP++ GHE+VG V EVG V FK GD+V
Sbjct: 24 GKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRV- 82
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
+ +C+ C E YC N+ G G +++ +V++P
Sbjct: 83 ASLLYAPDGTCEYCRSGEEAYCK-------NRLGYGEELDGFFAEYAKVKVTSLVKVPPN 135
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214
+ + C VY LR G+ K G V V G GG+G A++ AKA+G KV ++
Sbjct: 136 VSDEGAVIVPCVTGMVYRGLRRAGV-KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVT 194
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKL 274
+S SK + + + AD +V E +G D +I+TV L + L GK+
Sbjct: 195 SSESKA-KIVSKY-ADYVIVGSKFSEEVKKIGGADIVIETV-GTPTLEESLRSLNMGGKI 251
Query: 275 VLVG----APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV-IP 329
+ +G +P L L + +L +I+ G + ++ +E + A+ I+ I +
Sbjct: 252 IQIGNVDPSPTYSLRL-GYIILKDIEII-GHISATKRDVEEALKLVAEGKIKPVIGAEVS 309
Query: 330 ADYVNTALERLAKADVRYRFVID 352
++ ALE L + ++
Sbjct: 310 LSEIDKALEELKDKSRIGKILVK 332
|
Length = 334 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 1e-32
Identities = 68/273 (24%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V KV CGIC SD+ P+V GHE G V EVGS V VGD+V
Sbjct: 23 GPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVA 81
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
V ++ C C+ C + C ++ G +++ + +++IP+
Sbjct: 82 VNPLL-PCGKCEYCKKGEYSLCSNYDY-IGSRRD------GAFAEYVSVPARNLIKIPDH 133
Query: 156 TPLDATA---PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-V 210
+ A P A V + + G V V+G G +G +A+++ K +G K V
Sbjct: 134 VDYEEAAMIEPAAVALHAVRLAGI------TLGDTVVVIGAGTIGLLAIQWLKILGAKRV 187
Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
+ +K LGAD + +++D + +G +I+ + + +
Sbjct: 188 IAVDID-DEKLAVARELGADDTINPKEEDV-EKVRELTEGRGADLVIEAAGSPATIEQAL 245
Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIV 298
L + GK+VLVG P + L + KI+
Sbjct: 246 ALARPGGKVVLVGIPYGDVTLSEEAF---EKIL 275
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 123 bits (310), Expect = 2e-32
Identities = 89/325 (27%), Positives = 135/325 (41%), Gaps = 50/325 (15%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIY---PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV G+ DL + + A P++PGH++ GVV VG V+ FKVGD
Sbjct: 26 GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGD 85
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V G M R G Y++ +V +
Sbjct: 86 EV-FG-MTPFTRG------------------------------GAYAEYVVVPADELALK 113
Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVT 211
P + A L AG+T + L G K G V + G GG+G AV+ AKA G +
Sbjct: 114 PANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-- 171
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQD-EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
VI+T+ + ++ + LGAD + D E AA G +D ++DTV L + L+K
Sbjct: 172 VIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGG-ETLARSLALVKP 230
Query: 271 QGKLV-LVGAPEKPLELPAFSLLMGRKIVGGSMI--GGMKETQEMIDFAAKHNIRADI-E 326
G+LV + G P PA R + G + ++ E+ + +R +
Sbjct: 231 GGRLVSIAGPP------PAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDR 284
Query: 327 VIPADYVNTALERLAKADVRYRFVI 351
V P + A ERL R + V+
Sbjct: 285 VFPLEDAAEAHERLESGHARGKVVL 309
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 2e-32
Identities = 95/315 (30%), Positives = 136/315 (43%), Gaps = 41/315 (13%)
Query: 34 ATGEKDVTFKVTHCGICHSDLH-------LIKNE----WGNAIYPIVPGHEIVGVVTEVG 82
+V KV CGIC SDLH I E P+ GHE GVV EVG
Sbjct: 21 PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80
Query: 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI----TYGGY 138
S V+ FKVGD+V V C +C +C L N C + G I GG+
Sbjct: 81 SGVTGFKVGDRVVVEPT-IKCGTCGACKRGLYNLCDSL----------GFIGLGGGGGGF 129
Query: 139 SDIMVADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
++ +V + V ++P+ PL+ A PL A + +R G KPG V+G G +
Sbjct: 130 AEYVVVPAYHVHKLPDNVPLEEAALVEPLAVA----WHAVRRSGF-KPGDTALVLGAGPI 184
Query: 196 GHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMD 249
G + + KA G K+ V S +++ E E LGA L + D + G +D
Sbjct: 185 GLLTILALKAAGASKIIVSEPSEARR-ELAEELGATIVLDPTEVDVVAEVRKLTGGGGVD 243
Query: 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKET 309
D L I L+ +G V V EKP+ L++ K + GS+ ++
Sbjct: 244 VSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDF 303
Query: 310 QEMIDFAAKHNIRAD 324
+E+ID A I A+
Sbjct: 304 EEVIDLLASGKIDAE 318
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 1e-31
Identities = 91/335 (27%), Positives = 138/335 (41%), Gaps = 51/335 (15%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G +V +V G+ D+ + + P +PG E GVV VGS V+ FKVGD+V
Sbjct: 26 GPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRV 85
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
VG GGY++ +V ++V +P+
Sbjct: 86 AALGGVGR--------------------------------DGGYAEYVVVPADWLVPLPD 113
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVI 213
G + A L AG+T + L KPG V V G GG+G A++ AKA+G V V
Sbjct: 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATV-VA 172
Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM-----DGIIDTVSAVHPLMPLIGLL 268
S S+K E ++ LGAD + R++D ++ D ++DTV + L
Sbjct: 173 VVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAAL 231
Query: 269 KSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGM------KETQEMIDFAAKHN 320
G+LV +GA P+ L LL R + G +G + E+ D A
Sbjct: 232 APGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGK 291
Query: 321 IRADI-EVIP-ADYVNTALERLAKADVRYRFVIDV 353
++ I V P A+ A L + + V+ V
Sbjct: 292 LKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326
|
Length = 326 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 7e-31
Identities = 72/250 (28%), Positives = 109/250 (43%), Gaps = 16/250 (6%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
V +V CG+C SD H + + P VPGHE GVV EVG VS+++VGD+V
Sbjct: 24 PPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVT 83
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD--EHFVVRIP 153
V V C +C C N C + G G +++ + + +VR+P
Sbjct: 84 VP-FVLGCGTCPYCRAGDSNVCEHQVQP-------GFTHPGSFAEYVAVPRADVNLVRLP 135
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVI 213
+ A L C T + L KPG V V G GG+G AV A A+G +V +
Sbjct: 136 DDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAV 195
Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLL 268
K A LGA + + + + +++ AA+ G +D + + L
Sbjct: 196 DIDDDKLELA-RELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASL 254
Query: 269 KSQGKLVLVG 278
+ +G+ V VG
Sbjct: 255 RKRGRHVQVG 264
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 4e-30
Identities = 86/334 (25%), Positives = 121/334 (36%), Gaps = 39/334 (11%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS------KFK 89
V +V G+C SD+H + PI+ GHE VG V +G V+ K
Sbjct: 24 EPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLK 83
Query: 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV--ADEH 147
VGD+V + C C C + C D GGY++ +
Sbjct: 84 VGDRV-TWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTA 142
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
VR+P+ P + AP CA TV + L G G V V G G LG AV AK G
Sbjct: 143 I-VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAG 201
Query: 208 -VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD--------------GII 252
+V VI SP + E GAD+ + + + Q D G
Sbjct: 202 ARRVIVIDGSPERL-ELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHP 260
Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
V + LL+ G VLVG AP + L ++ + G
Sbjct: 261 AAVPEG------LELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLY 314
Query: 311 EMIDFAAKHNIR---ADI--EVIPADYVNTALER 339
+ F + R A++ P + +N ALE
Sbjct: 315 RAVRFLERTQDRFPFAELVTHRYPLEDINEALEL 348
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 6e-30
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 37 EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
+V +V GIC SDLH+ + E P++ GHE G+V EVG V+ KVGD+V V
Sbjct: 1 PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60
Query: 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
++ C C +C EN CP N G GG+++ +V +V +
Sbjct: 61 YPLI-PCGKCAACREGRENLCP-------NGKFLGVHLDGGFAEYVVVPARNLVPL 108
|
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108 |
| >gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 1e-29
Identities = 88/311 (28%), Positives = 130/311 (41%), Gaps = 23/311 (7%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G ++ +V CG+C +DLH+ + + + PGHE+VG V G+ F VGD+VG
Sbjct: 26 GPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVG 85
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
+ + +C C C EN CP A++Y G T GGY++ F R+P G
Sbjct: 86 IAWLRRTCGVCRYCRRGAENLCP------ASRY-TGWDTDGGYAEYTTVPAAFAYRLPTG 138
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
APLLCAGI Y L L PG +G+ G GG H+ + A A G V V++
Sbjct: 139 YDDVELAPLLCAGIIGYRALLRASL-PPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTR 197
Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
+ + A+ LGA S +D I A + P + L G L
Sbjct: 198 GAAARRLALA-LGAASA-----GGAYDTPPEPLDAAILFAPAGGLVPPALEALDRGGVLA 251
Query: 276 LVG-----APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPA 330
+ G P + F R + + +E ++ AA+H +R P
Sbjct: 252 VAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADA----REFLELAAQHGVRVTTHTYPL 307
Query: 331 DYVNTALERLA 341
+ AL L
Sbjct: 308 SEADRALRDLK 318
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 114 bits (289), Expect = 5e-29
Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 38/286 (13%)
Query: 43 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
++ GICH+DL +++ P V GHE GVV VGS V+ K GD V + S
Sbjct: 33 RIVATGICHTDLV-VRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLS--FAS 89
Query: 103 CRSCDSCAIDLENYCPKVI-MTYANKYHDGTITY--GGYSDI-------------MVADE 146
C C +C YC + ++ + DG+ + + V E
Sbjct: 90 CGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHE 149
Query: 147 HFVVRIPEGTPLDATAPLLC-----AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
VV++ + PL+ APL C AG V + L+ +PG + V G G +G AV
Sbjct: 150 RNVVKVDKDVPLELLAPLGCGIQTGAG-AVLNVLK----PRPGSSIAVFGAGAVGLAAVM 204
Query: 202 FAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVS 256
AK G + + S+ A E LGA + +++D ++ G +D +DT
Sbjct: 205 AAKIAGCTTIIAVDIVDSRLELAKE-LGATHVINPKEEDLVAAIREITGGGVDYALDTTG 263
Query: 257 AVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLM-GRKIVG 299
+ + L +G L LVGAP + L LL+ G+ I G
Sbjct: 264 VPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRG 309
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 2e-28
Identities = 93/351 (26%), Positives = 147/351 (41%), Gaps = 51/351 (14%)
Query: 38 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
+V K+ +CH+D+ I+ + ++P++ GHE G+V VG V+ K GDKV +
Sbjct: 28 NEVRIKMLATSVCHTDILAIE-GFKATLFPVILGHEGAGIVESVGEGVTNLKPGDKV-IP 85
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT--ITYGG-----------YSDIMVA 144
+G C C +C N C K + DGT T G +S V
Sbjct: 86 LFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVV 145
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
DE++V +I PL+ L C T Y +PG V V GLG +G A+ AK
Sbjct: 146 DENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAK 205
Query: 205 AMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM------------GT 247
G ++ + + K +A + GA F+ +D D E+ M G
Sbjct: 206 IAGASRIIGVDINEDKFEKA-KEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGN 264
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGM 306
D + + + + G V+VG P L + F L++GR GS GG
Sbjct: 265 ADLMNEALESTK---------LGWGVSVVVGVPPGAELSIRPFQLILGRT-WKGSFFGGF 314
Query: 307 KETQEMIDFAAKH-NIRADIE-----VIPADYVNTALERLAKADVRYRFVI 351
K ++ +K+ N + D++ V+P + +N + L K+ R VI
Sbjct: 315 KSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFD-LMKSGECIRTVI 364
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 112 bits (281), Expect = 2e-28
Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 22/277 (7%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V KV GIC SDLH+ K ++ P+V GHE G + EVG V +KVGD+V
Sbjct: 25 GPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVV 84
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
+C C C N CP ++ GT GG+++ ++ E + +PE
Sbjct: 85 SETTFSTCGRCPYCRRGDYNLCP-------HRKGIGTQADGGFAEYVLVPEESLHELPEN 137
Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
L+A A PL A V +PG V V G G +G +A + AK G V V
Sbjct: 138 LSLEAAALTEPLAVAVHAVAERSGI----RPGDTVVVFGPGPIGLLAAQVAKLQGATVVV 193
Query: 213 ISTSPSKKSEAI-ERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
+ T + + + LGAD+ +D + DG +I+ AV L +
Sbjct: 194 VGTEKDEVRLDVAKELGADAVNGGE-EDLAELVNEITDGDGADVVIECSGAVPALEQALE 252
Query: 267 LLKSQGKLVLVG-APEKPLELPAFSLLMGRKIVGGSM 302
LL+ G++V VG + ++ V GS
Sbjct: 253 LLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSR 289
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 112 bits (283), Expect = 2e-28
Identities = 83/267 (31%), Positives = 119/267 (44%), Gaps = 32/267 (11%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V KV CGIC +DLH+ + E+G A P+VPGHE GVV VGSKV+ FKVGD+V
Sbjct: 23 GPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGDRVA 81
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
V + C C C N C + G GG+++ +V V +IP+
Sbjct: 82 VDPNI-YCGECFYCRRGRPNLCENLTAV-------GVTRNGGFAEYVVVPAKQVYKIPDN 133
Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVAVKFAKAMGV 208
+ A PL CA +GLD KPG V V G G +G + + K G
Sbjct: 134 LSFEEAALAEPLSCA---------VHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGA 184
Query: 209 -KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG---IIDTVSAVHPLMPL 264
+VTV + K E ++LGA + +D G +I+ L
Sbjct: 185 SRVTVAEPNEEKL-ELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQA 243
Query: 265 IGLLKSQGKLVL--VGAPEKPLELPAF 289
I + G +++ V AP+ + + F
Sbjct: 244 IEYARRGGTVLVFGVYAPDARVSISPF 270
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 7e-28
Identities = 87/303 (28%), Positives = 135/303 (44%), Gaps = 17/303 (5%)
Query: 29 HFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP-IVPGHEIVGVVTEVGSKVSK 87
F G +V +V G+C SDLH + Y ++PGHE GVV VG V+
Sbjct: 16 EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTH 75
Query: 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
F+VGD+V V VG C +C +C C Y G GG+++ M+ E
Sbjct: 76 FRVGDRVMVYHYVG-CGACRNCRRGWMQLCTSKRAAY------GWNRDGGHAEYMLVPEK 128
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG 207
++ +P+ A LLC T Y LR G+ V VVG G +G A+ A+A+G
Sbjct: 129 TLIPLPDDLSFADGALLLCGIGTAYHALRRVGV-SGRDTVLVVGAGPVGLGALMLARALG 187
Query: 208 V-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPL 261
V + SP + A LGAD F+++ QD++Q G I+
Sbjct: 188 AEDVIGVDPSPERLELAKA-LGAD-FVINSGQDDVQEIRELTSGAGADVAIECSGNTAAR 245
Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
+ ++ G+LVLVG + + L+ ++ + GS + + +E +F A+H +
Sbjct: 246 RLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKL 305
Query: 322 RAD 324
D
Sbjct: 306 EVD 308
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 1e-27
Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 30/262 (11%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V KV CGIC +D+ I+ + P + GHEI G + EVG V+ FKVGD+V
Sbjct: 23 GPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVF 82
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-GGYSDIM-VADEHF----V 149
V V C C C EN CP Y Y GG+++ + V V
Sbjct: 83 VAPHVP-CGECHYCLRGNENMCP--------NYKKFGNLYDGGFAEYVRVPAWAVKRGGV 133
Query: 150 VRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
+++P+ + A PL C + R G+ KPG V V+G G +G + AKA
Sbjct: 134 LKLPDNVSFEEAALVEPLAC----CINAQRKAGI-KPGDTVLVIGAGPIGLLHAMLAKAS 188
Query: 207 G-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHP 260
G KV V + + A ++LGAD + + ++D ++ DG +I +
Sbjct: 189 GARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEA 247
Query: 261 LMPLIGLLKSQGKLVLVGAPEK 282
+ L++ G+++ G K
Sbjct: 248 QAQALELVRKGGRILFFGGLPK 269
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 5e-26
Identities = 86/296 (29%), Positives = 135/296 (45%), Gaps = 30/296 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V K+ G+CHSD HL+ + YPI+ GHE GVVT+VG V+ K GD V
Sbjct: 25 KAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHEGAGVVTKVGPGVTGVKPGDHV- 83
Query: 96 VGCMVGSCRSCDSCAIDLENYCPK--VIMTYANKYHDGTITY-------------GGYSD 140
V + +C C C+ L+N C ++T ++ DGT + G +S+
Sbjct: 84 VLSFIPACGRCRWCSTGLQNLCDLGAALLT-GSQISDGTYRFHADGQDVGQMCLLGTFSE 142
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
V E VV+I + PLD + C T + +PG V V+G+GG+G AV
Sbjct: 143 YTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMGIGGVGINAV 202
Query: 201 KFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAM----GTM-DGIIDT 254
+ A G + VI+ P + K E + GA S + + +Q G D I T
Sbjct: 203 QGAAVAGAR-KVIAVDPVEFKREQALKFGATHAFASME-EAVQLVRELTNGQGADKTIIT 260
Query: 255 VSAVHPLM--PLIGLLKSQGKLVLVG-AP--EKPLELPAFSLLMGRKIVGGSMIGG 305
V V + + G++V+ G P + +++ F L + +K + G++ GG
Sbjct: 261 VGEVDGEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTLLQKELQGTLFGG 316
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 5e-25
Identities = 87/356 (24%), Positives = 129/356 (36%), Gaps = 60/356 (16%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
+V KV G+CH+DLH+I + P++ GHE G+V +G V+ K GD
Sbjct: 21 APPKAGEVRIKVVATGVCHTDLHVIDGKL-PTPLPVILGHEGAGIVESIGPGVTTLKPGD 79
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-----------------ANKYHDGTITY 135
KV + C C C N C K T + GT T+
Sbjct: 80 KV-IPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTF 138
Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
Y+ V E + +I PL+ + C T Y PG V GLGG+
Sbjct: 139 AEYT---VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGV 195
Query: 196 GHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD--------EMQA--- 243
G + KA G ++ + + K +A + LGA + RDQD EM
Sbjct: 196 GLSVIMGCKAAGASRIIAVDINKDKFEKAKQ-LGATECINPRDQDKPIVEVLTEMTDGGV 254
Query: 244 -----AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRK 296
+G+ D + + A G V+VG P L LL GR
Sbjct: 255 DYAFEVIGSADTLKQALDATR---------LGGGTSVVVGVPPSGTEATLDPNDLLTGRT 305
Query: 297 IVGGSMIGGMKETQEMI----DFAAKHNIRAD---IEVIPADYVNTALERLAKADV 345
I G++ GG K + + K D V+P + +N + + +
Sbjct: 306 IK-GTVFGGWKSKDSVPKLVALYRQK-KFPLDELITHVLPFEEINDGFDLMRSGES 359
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 7e-25
Identities = 96/365 (26%), Positives = 150/365 (41%), Gaps = 39/365 (10%)
Query: 17 AARDTSGVLSPFHFSR---------RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP 67
A +G +P+ SR G +V K+ G+CHSDL +I + + P
Sbjct: 4 AVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-P 62
Query: 68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN- 126
+ GHE GVV EVG V+ +VGD V V V SC C CA C
Sbjct: 63 MALGHEAAGVVVEVGEGVTDLEVGDHV-VLVFVPSCGHCRPCAEGRPALCEPGAAANGAG 121
Query: 127 ---------KYHDGTITY----GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS 173
+ G I + +++ V VV+I + PL+ A CA +T
Sbjct: 122 TLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVG 181
Query: 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF 232
+ +PG V VVGLGG+G A+ A A G +V + + K + A E LGA +
Sbjct: 182 AVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATAT 240
Query: 233 LVSRDQDEMQ----AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLEL 286
+ + D + ++ G +D + +V L + + G V G PE L +
Sbjct: 241 VNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSV 300
Query: 287 PAFSLLMGRKIVGGSMIGGMKETQEM---IDFAAKHNIRAD---IEVIPADYVNTALERL 340
PA SL+ + + GS +G +++ + + D +P D +N +RL
Sbjct: 301 PALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRL 360
Query: 341 AKADV 345
A +
Sbjct: 361 AAGEA 365
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 87/293 (29%), Positives = 130/293 (44%), Gaps = 33/293 (11%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V +V G+ D ++I + P +PG E GVV EVG V K GD+V
Sbjct: 25 GPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPGAEFAGVVEEVGDHVKGVKKGDRVV 83
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
V V +CD C E C N G ++ GGY++ +V E + +IP+
Sbjct: 84 VYNRV-FDGTCDMCLSGNEMLC-------RNGGIIGVVSNGGYAEYIVVPEKNLFKIPDS 135
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVIS 214
+ A L A +T Y L+ GL PG V V G G G AV+ AK MG +V +S
Sbjct: 136 ISDELAASLPVAALTAYHALKTAGL-GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVS 194
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI-----GLLK 269
+ + ++ GAD + D DE++ + + + D V ++ L +L
Sbjct: 195 -----RKDWLKEFGADEVV---DYDEVEEKVKEITKMADVV--INSLGSSFWDLSLSVLG 244
Query: 270 SQGKLVLVGA---PEKPLELPAFSLLMGRKI-VGGSMIGGMKETQEMIDFAAK 318
G+LV G E L+L S L ++I + GS G KE E++ A
Sbjct: 245 RGGRLVTFGTLTGGEVKLDL---SDLYSKQISIIGSTGGTRKELLELVKIAKD 294
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 98.5 bits (246), Expect = 3e-23
Identities = 78/315 (24%), Positives = 121/315 (38%), Gaps = 17/315 (5%)
Query: 35 TGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G D +VT IC SDLH+ + A + ++ GHE VG V EVGS V + K GD+V
Sbjct: 23 QGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRV 82
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI--TYGGYSDIMVADEHFVVRI 152
V C+ C C C +C I Y + AD + + +I
Sbjct: 83 SVPCIT-FCGRCRFCRRGYHAHCEN---GLWGWKLGNRIDGGQAEYVRVPYADMN-LAKI 137
Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVT 211
P+G P + L T + G+ KPG V V+G G +G AV A+ +G ++
Sbjct: 138 PDGLPDEDALMLSDILPTGFHGAELAGI-KPGSTVAVIGAGPVGLCAVAGARLLGAARII 196
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT----MDGIIDTVSAVHPLMPLIGL 267
+ ++P + A E D Q T +D +I+ V + +
Sbjct: 197 AVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKV 256
Query: 268 LKSQGKLVLVGAPEKPLELPAFSLLMGR-KIVGGSMIGGMKETQEMIDFAAKHNIRAD-- 324
++ G + VG KP LP G+ ++ E++D + I
Sbjct: 257 VRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKL 316
Query: 325 -IEVIPADYVNTALE 338
P D + A
Sbjct: 317 ITHRFPLDDILKAYR 331
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 96.5 bits (241), Expect = 1e-22
Identities = 83/315 (26%), Positives = 125/315 (39%), Gaps = 51/315 (16%)
Query: 43 KVTHCGICHSDLHLIKNEWGNAI---YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
KV + D L + + +P +PG + G V VGS V++FKVGD+V G +
Sbjct: 32 KVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEV-FGRL 90
Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPL 158
G ++ +VA E + + PEG +
Sbjct: 91 -------------------------------PPKGGGALAEYVVAPESGLAKKPEGVSFE 119
Query: 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STS 216
+A A L AG+T LR G KPG V + G GG+G AV+ AKA+G VT + ST
Sbjct: 120 EA-AALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST- 177
Query: 217 PSKKSEAIERLGADSFLVSRDQD--EMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGK 273
+ +E + LGAD + +D + A D I D V L LK G+
Sbjct: 178 --RNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGR 235
Query: 274 LVLVGAPEK-----PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EV 327
V VG L LP GR++ ++ +++ + + ++ I V
Sbjct: 236 YVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSV 295
Query: 328 IPADYVNTALERLAK 342
P + A RL
Sbjct: 296 YPLEDAPEAYRRLKS 310
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 95.3 bits (238), Expect = 4e-22
Identities = 79/261 (30%), Positives = 118/261 (45%), Gaps = 25/261 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V +V GIC SDLH+ G A YP + GHE+ G V EVG V+ KVGD
Sbjct: 23 GAGEVLVRVKRVGICGSDLHIYH---GRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V V SC C +C N C + + G GG+++ +V ++ +
Sbjct: 80 RV-VVDPYISCGECYACRKGRPNCCENLQVL-------GVHRDGGFAEYIVVPADALL-V 130
Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
PEG LD A + I ++ R G V VVG G +G ++ AKA G +V V
Sbjct: 131 PEGLSLDQAALVEPLAIGAHAVRR--AGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIV 188
Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------DGIIDTVSAVHPLMPLIG 266
+ + E LGAD + D+D + A + + D +ID + +
Sbjct: 189 VDIDDERL-EFARELGADDTINVGDED-VAARLRELTDGEGADVVIDATGNPASMEEAVE 246
Query: 267 LLKSQGKLVLVGAPEKPLELP 287
L+ G++VLVG + P+ P
Sbjct: 247 LVAHGGRVVLVGLSKGPVTFP 267
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 94.5 bits (236), Expect = 7e-22
Identities = 77/279 (27%), Positives = 119/279 (42%), Gaps = 33/279 (11%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIY----PIVPGHEIVGVVTEVGSKVSKFKVG 91
G +V +V GIC SD+H K+ + P+V GHE G V VGS V+ KVG
Sbjct: 21 GPGEVLVRVRAVGICGSDVHYYKH-GRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79
Query: 92 DKVGV--GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
D+V + G CR+C+ C N CP + A DGT+ + F
Sbjct: 80 DRVAIEPGV---PCRTCEFCKSGRYNLCPDMRF-AATPPVDGTLC-----RYVNHPADFC 130
Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 209
++P+ L+ A + + V++ R +PG V V G G +G + AKA G
Sbjct: 131 HKLPDNVSLEEGALVEPLSVGVHACRR--AGVRPGDTVLVFGAGPIGLLTAAVAKAFGAT 188
Query: 210 VTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMGTM--DGIIDTV---SAV 258
V++ + E + LGA + R +D ++ +G D +I+ S +
Sbjct: 189 KVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCI 248
Query: 259 HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI 297
I + G +VLVG + + LP S R+I
Sbjct: 249 Q---TAIYATRPGGTVVLVGMGKPEVTLP-LSAASLREI 283
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 94.2 bits (235), Expect = 1e-21
Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 35/279 (12%)
Query: 36 GEKDVTFKVTHCGICHSDLH-LIKNEWGNAI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V +V GIC SDLH +G P+V GHE+ GVV VG V+ G
Sbjct: 20 GPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQ 79
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY---ANKY-HDGTITYGGYSDIMVADEHF 148
+V V C +CD C N C M + A ++ H GG+ + +V D
Sbjct: 80 RVAVNPSR-PCGTCDYCRAGRPNLCLN--MRFLGSAMRFPH----VQGGFREYLVVDASQ 132
Query: 149 VVRIPEGTPLDATA---PLLCA--GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
V +P+G L A PL A + L G V V G G +G + V A
Sbjct: 133 CVPLPDGLSLRRAALAEPLAVALHAVNRAGDLA-------GKRVLVTGAGPIGALVVAAA 185
Query: 204 KAMG---VKVTVISTSPSKKSEAIERLGADSFL-VSRDQ-DEMQAAMGTMDGIIDTVSAV 258
+ G + T ++ +P +GAD + ++RD A G D + + A
Sbjct: 186 RRAGAAEIVATDLADAP---LAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAP 242
Query: 259 HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI 297
L + +++ G +V VG P+ LP + L+ +++
Sbjct: 243 AALASALRVVRPGGTVVQVGMLGGPVPLP-LNALVAKEL 280
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 94.3 bits (235), Expect = 1e-21
Identities = 82/313 (26%), Positives = 124/313 (39%), Gaps = 66/313 (21%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V K+ H +CH+D++ + + ++P + GHE G+V VG V+ K GD V +
Sbjct: 29 EVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHV-LPV 87
Query: 99 MVGSCRSCDSCAIDLENYCPKV-------IMTYANK----------YH-DGTITYGGYSD 140
G C+ C C + N C + +M K YH GT T+ Y+
Sbjct: 88 FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYT- 146
Query: 141 IMVADEHFVVRIPEGTPLDATAPLLC-------AGITVYSPLRFYGLDKPGMHVGVVGLG 193
V V +I PLD L C A V K G V + GLG
Sbjct: 147 --VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-------KKGSTVAIFGLG 197
Query: 194 GLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM--- 245
+G + A+ G ++ + +PSK +A ++ G F+ +D D E+ A M
Sbjct: 198 AVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNPKDHDKPVQEVIAEMTGG 256
Query: 246 ---------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMG 294
G +D +I VH G VL+G P K +LL G
Sbjct: 257 GVDYSFECTGNIDAMISAFECVHD---------GWGVTVLLGVPHKDAVFSTHPMNLLNG 307
Query: 295 RKIVGGSMIGGMK 307
R + G++ GG K
Sbjct: 308 RTLK-GTLFGGYK 319
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
| >gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 3e-21
Identities = 95/338 (28%), Positives = 140/338 (41%), Gaps = 44/338 (13%)
Query: 38 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
+V K+ GIC SD H++ + +P++ GHE G+V VG V+ K GDKV +
Sbjct: 33 HEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPGDKV-IP 90
Query: 98 CMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGT--ITYGG-----------YSDIMV 143
V C C +C N C K + DGT T G +S+ V
Sbjct: 91 LFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTV 150
Query: 144 ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFA 203
DE V +I PL+ + C T Y PG V GLGG+G A+
Sbjct: 151 VDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGC 210
Query: 204 KAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM--GTMD------G 250
KA G ++ + + K ++A E LGA + +D E+ M G +D G
Sbjct: 211 KAAGASRIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIG 269
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKE 308
+DT+ A L + G V+VG P + L + LL GR G++ GG K
Sbjct: 270 RLDTMKAA-----LASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGR-TWKGAVFGGWKS 323
Query: 309 TQEM----IDFAAKH-NIRADI-EVIPADYVNTALERL 340
+ D+ AK N+ I +P + +N + L
Sbjct: 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLL 361
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 92.2 bits (230), Expect = 4e-21
Identities = 88/334 (26%), Positives = 127/334 (38%), Gaps = 73/334 (21%)
Query: 34 ATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIY------PIVPGHEIVGVVTEVGSKVSK 87
A GE V +V G+ DL +I+ + Y P VPG E+ GVV VG V+
Sbjct: 26 APGE--VRIRVEAAGVNFPDLLMIQGK-----YQVKPPLPFVPGSEVAGVVEAVGEGVTG 78
Query: 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
FKVGD+V GG+++ +V
Sbjct: 79 FKVGDRVVALTG-----------------------------------QGGFAEEVVVPAA 103
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM 206
V +P+G + A L T Y L +PG V V+G GG+G AV+ AKA+
Sbjct: 104 AVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKAL 163
Query: 207 GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPL 261
G +V ++S +K LGAD + RD D + G + D V
Sbjct: 164 GARVIAAASSE-EKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDV-F 221
Query: 262 MPLIGLLKSQGKLVLVG-----APEKPLELPAFSLLMGRKIVG---GSMIG-----GMKE 308
+ L G+L+++G P+ P L LL +VG G+
Sbjct: 222 EASLRSLAWGGRLLVIGFASGEIPQIPANLL---LLKNISVVGVYWGAYARREPELLRAN 278
Query: 309 TQEMIDFAAKHNIRADI-EVIPADYVNTALERLA 341
E+ D A+ IR + V P + AL LA
Sbjct: 279 LAELFDLLAEGKIRPHVSAVFPLEQAAEALRALA 312
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 88.1 bits (219), Expect = 2e-19
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 23/221 (10%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
D K+ IC +DLH++K + + GHE VGVV EVGS V+ FKVGD+V + C
Sbjct: 27 DAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISC 86
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT------ITYGGYSDIMVADEHFVVRI 152
+ SC +C C L ++C N DGT I + S + ++
Sbjct: 87 IS-SCGTCGYCRKGLYSHCESGGWILGNLI-DGTQAEYVRIPHADNS---------LYKL 135
Query: 153 PEGTPLDATAPLLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VK 209
PEG +D A ++ + I T Y G KPG V +VG G +G A+ A+ K
Sbjct: 136 PEG--VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSK 193
Query: 210 VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
+ ++ ++ E ++LGA + S D ++ + DG
Sbjct: 194 IIMVDLDDNRL-EVAKKLGATHTVNSAKGDAIEQVLELTDG 233
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 62/199 (31%), Positives = 87/199 (43%), Gaps = 18/199 (9%)
Query: 38 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
D KVT IC SDLH+ + + V GHE VG V EVG +V KVGD+V V
Sbjct: 26 TDAIVKVTAAAICGSDLHIYRGHIPST-PGFVLGHEFVGEVVEVGPEVRTLKVGDRV-VS 83
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG----YSDIMVADEHFVVRIP 153
+C C C C K + + G+ G Y + AD ++++P
Sbjct: 84 PFTIACGECFYCRRGQSGRCAKGGLF----GYAGSPNLDGAQAEYVRVPFAD-GTLLKLP 138
Query: 154 EGTPLDATAPLLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KV 210
+G +A LL I T Y + +PG V V+G G +G AV A+ +G +V
Sbjct: 139 DGLSDEAA--LLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARV 195
Query: 211 TVISTSPSKKSEAIERLGA 229
+ P + A LGA
Sbjct: 196 FAVDPVPERLERA-AALGA 213
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 83/332 (25%), Positives = 137/332 (41%), Gaps = 29/332 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G +V +V + H DL + + G + P + G + GVV VG V+ K G +V
Sbjct: 26 GPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRV 85
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
+ + SC C+ C EN C + + G GGY++ + ++ IP+
Sbjct: 86 VIYPGI-SCGRCEYCLAGRENLCAQYGIL-------GEHVDGGYAEYVAVPARNLLPIPD 137
Query: 155 GTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVT 211
+ A APL +T + L +PG V V G G G+G A++ AK G V
Sbjct: 138 NLSFEEAAAAPL--TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVI 195
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEM------QAAMGTMDGIIDTVSAVHPLMPLI 265
+ S K A E LGAD +++ +++ +D +++ V A +
Sbjct: 196 ATAGSEDKLERAKE-LGAD-YVIDYRKEDFVREVRELTGKRGVDVVVEHVGAAT-WEKSL 252
Query: 266 GLLKSQGKLVLVGA---PEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
L G+LV GA E P++L I+G +M G E E + + ++
Sbjct: 253 KSLARGGRLVTCGATTGYEAPIDL-RHVFWRQLSILGSTM-GTKAELDEALRLVFRGKLK 310
Query: 323 ADIE-VIPADYVNTALERLAKADVRYRFVIDV 353
I+ V P + A RL + + V+
Sbjct: 311 PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 84.1 bits (209), Expect = 3e-18
Identities = 74/298 (24%), Positives = 116/298 (38%), Gaps = 54/298 (18%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P++P + G V VG V++FKVGD+V P T+
Sbjct: 58 PLIPLSDGAGEVVAVGEGVTRFKVGDRV----------------------VP----TFFP 91
Query: 127 KYHDGTITY------------GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSP 174
+ DG T G ++ +V E +VR P+ + A L CAG+T ++
Sbjct: 92 NWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA 151
Query: 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
L G KPG V V G GG+ A++FAKA G +V + ++S +K E + LGAD +
Sbjct: 152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARV-IATSSSDEKLERAKALGADHVIN 210
Query: 235 SRDQDEMQAA------MGTMDGIIDTVSAVHPLMPL---IGLLKSQGKLVLVGA-PEKPL 284
R + +D +++ L I + G + L+G
Sbjct: 211 YRTTPDWGEEVLKLTGGRGVDHVVEVGGPGT----LAQSIKAVAPGGVISLIGFLSGFEA 266
Query: 285 ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE-VIPADYVNTALERLA 341
+ LL + G +G + + M H IR I+ V P + A L
Sbjct: 267 PVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYLE 324
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 5e-18
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTM-- 248
G+G AV+ AKA+G + +K E + LGAD + RD+D ++ G
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60
Query: 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMK 307
D +ID V A L + LL+ G++V+VG P P+ P LL+ + GS+ GG +
Sbjct: 61 DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGGRE 120
Query: 308 ETQEMIDFAAK 318
E +E ++ A
Sbjct: 121 EFEEALELLAS 131
|
Length = 131 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 7e-18
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 25/234 (10%)
Query: 40 VTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
V K+ G+CH+D + + ++P++ GHE G+V VG V+ K GD V +
Sbjct: 30 VRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHV-IPLY 88
Query: 100 VGSCRSCDSCAIDLENYCPKV-------IM-------TYANK--YH-DGTITYGGYSDIM 142
C C C N C K+ +M + K YH GT T+ Y+ +
Sbjct: 89 TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYT--V 146
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKF 202
VA+ V +I PLD L C T Y + +PG V V GLG +G ++
Sbjct: 147 VAEIS-VAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQG 205
Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAMGTM-DGIID 253
AKA G ++ I +P K A ++ GA + +D D+ +Q + M DG +D
Sbjct: 206 AKAAGASRIIGIDINPDKFELA-KKFGATDCVNPKDHDKPIQQVLVEMTDGGVD 258
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 82.6 bits (204), Expect = 1e-17
Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 30/280 (10%)
Query: 37 EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
+ DV KV G+C SD+ I G YPI GHE G V VGS V GD V
Sbjct: 25 QDDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSGYVEAVGSGVDDLHPGD--AV 81
Query: 97 GCM-VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
C+ + C +C C + C A G+ GG ++ +V + +P
Sbjct: 82 ACVPLLPCFTCPECLRGFYSLC-------AKYDFIGSRRDGGNAEYIVVKRKNLFALPTD 134
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDK--PGMHVGVVGLGGLGHVAVKFAKAMGVK-VTV 212
P++ A ITV L + L + G +V ++G G +G +A++ A A+G K VT
Sbjct: 135 MPIEDGA--FIEPITV--GLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTA 190
Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMGTM--DGIIDTVSAVHPLMPL-IGL 267
I + K + A + LGA SR+ ++Q+ + + D +I + V + L I +
Sbjct: 191 IDINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEI 249
Query: 268 LKSQGKLVLVGAPEKPLELPA--FSLLMGRK---IVGGSM 302
+ +L LVG L L + F ++ RK ++G M
Sbjct: 250 AGPRAQLALVGTLHHDLHLTSATFGKIL-RKELTVIGSWM 288
|
Length = 347 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 2e-17
Identities = 73/267 (27%), Positives = 105/267 (39%), Gaps = 51/267 (19%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G +V KV G+ D +I YP VPG + GVV VG+KV+ +KVGD+V
Sbjct: 26 GAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVA 85
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
YH G +++ V D V+ +P+
Sbjct: 86 --------------------------------YHASLARGGSFAEYTVVDARAVLPLPDS 113
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG-----VVGLGGLGHVAVKFAKAMGVKV 210
+ A L CAG+T Y L K + G G GG+G AV+ AK G +
Sbjct: 114 LSFEEAAALPCAGLTAYQALF----KKLRIEAGRTILITGGAGGVGSFAVQLAKRAG--L 167
Query: 211 TVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLI 265
VI+T + E ++ LGAD + D+D + G ++DTV L
Sbjct: 168 RVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAA-LA 226
Query: 266 GLLKSQGKLV-LVGAPEKPLELPAFSL 291
L G LV + G P+ P F+
Sbjct: 227 PTLAFNGHLVCIQGRPDAS-PDPPFTR 252
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-17
Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 27/277 (9%)
Query: 25 LSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKN-EWGNAIY--PIVPGHEIVGVVTEV 81
+ PF G DV ++ GIC SD+H +K + + P+V GHE G++ EV
Sbjct: 31 IQPFKLP--PLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEV 88
Query: 82 GSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDI 141
GS+V VGD+V + + SC C+ C N CP++ K+ +G ++
Sbjct: 89 GSEVKHLVVGDRVALEPGI-SCWRCNLCKEGRYNLCPEM------KFFATPPVHGSLANQ 141
Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITV-YSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
+V ++PE L+ A +C ++V R + P +V V+G G +G V +
Sbjct: 142 VVHPADLCFKLPENVSLEEGA--MCEPLSVGVHACRRANIG-PETNVLVMGAGPIGLVTM 198
Query: 201 KFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV--SRDQD------EMQAAMGT-MDG 250
A+A G ++ ++ + S A + LGAD ++ + +D E+Q AMG +D
Sbjct: 199 LAARAFGAPRIVIVDVDDERLSVAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMGGGIDV 257
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP 287
D V + + ++ GK+ LVG + +P
Sbjct: 258 SFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVP 294
|
Length = 364 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 2e-16
Identities = 63/262 (24%), Positives = 100/262 (38%), Gaps = 47/262 (17%)
Query: 43 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
KV + D + + YP + G + G V EVGS V++FKVGD+V G + G
Sbjct: 32 KVKAVALNPVDWKHQDYGFIPS-YPAILGCDFAGTVVEVGSGVTRFKVGDRV-AGFVHG- 88
Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--A 160
+ G + + +VAD +IP+ + A
Sbjct: 89 -------------------------GNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAA 123
Query: 161 TAP--LLCAGITVYS----PLRFYGLDKPGMHVGVVGLGG---LGHVAVKFAKAMGVKVT 211
T P L+ A + ++ PL V+ GG +G +A++ AK G K
Sbjct: 124 TLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-- 181
Query: 212 VISTSPSKKSEAIERLGADSFLVSRD----QDEMQAAMGTMDGIIDTVSAVHPLMPLIGL 267
VI+T+ K + ++ LGAD+ D +D A G + +D +S
Sbjct: 182 VITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEA 241
Query: 268 LKS--QGKLVLVGAPEKPLELP 287
L GKLV + + E
Sbjct: 242 LGRSGGGKLVSLLPVPEETEPR 263
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 79.1 bits (196), Expect = 2e-16
Identities = 64/212 (30%), Positives = 86/212 (40%), Gaps = 26/212 (12%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
D +VT IC SDLHL + GHE +GVV EVG +V KVGD+V V
Sbjct: 27 DAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRV-VVP 85
Query: 99 MVGSCRSCDSCAIDLENYC----PKVIMTYANKYHDGTI-----TYGGYSD-----IMVA 144
+C C C L + C P M + I GGY+ + V
Sbjct: 86 FTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVP 145
Query: 145 DEHF-VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVA 199
+IP+ D A L + I P ++ + KPG V V G G +G A
Sbjct: 146 FADVGPFKIPDDLS-DEKA-LFLSDIL---PTGYHAAELAEVKPGDTVAVWGCGPVGLFA 200
Query: 200 VKFAKAMGVK-VTVISTSPSKKSEAIERLGAD 230
+ AK +G + V I P + A LGA+
Sbjct: 201 ARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 2e-16
Identities = 66/312 (21%), Positives = 105/312 (33%), Gaps = 66/312 (21%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P PG+++VG V +GS V+ F+VGD+V +
Sbjct: 58 PFTPGYDLVGRVDALGSGVTGFEVGDRVA--ALT-------------------------- 89
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
GG ++ + D ++V +PEG L+ +T Y L G
Sbjct: 90 -------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQR 142
Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQA 243
V + G GG+G ++ A G V T+ + A+ LGA + + R +D
Sbjct: 143 VLIHGASGGVGQALLELALLAG--AEVYGTASERNHAALRELGA-TPIDYRTKDWLPAML 199
Query: 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--------EKPLELPAFSLL--- 292
G +D + D V L G LV G + L
Sbjct: 200 TPGGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKL 258
Query: 293 ----MGRKIVGGSMIGG--------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALER 339
GR+ + ++ E++D AK IR I + +P V A
Sbjct: 259 KLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRL 318
Query: 340 LAKADVRYRFVI 351
L V + V+
Sbjct: 319 LESGKVVGKIVL 330
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 4e-16
Identities = 80/330 (24%), Positives = 135/330 (40%), Gaps = 33/330 (10%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V ++ G+CH+D + ++P++ GHE G+V VG V+ KVGD V +
Sbjct: 28 EVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHV-IPL 86
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITY-------------GGYSDIMVA 144
C C C N C V T DGT + +S+ V
Sbjct: 87 YTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVV 146
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
E + +I PL+ L C T + + G V V GLGG+G ++ A+
Sbjct: 147 PEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGAR 206
Query: 205 AMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSA 257
++ I +P+ K E ++LGA + D D+ ++ G +D + +
Sbjct: 207 MAKASRIIAIDINPA-KFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGN 265
Query: 258 VHPL-MPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMGRKIVGGSMIGGMK---ETQE 311
V+ + L K G+ +++G E+ F L+ GR + GS GG+K E
Sbjct: 266 VNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGR-VWRGSAFGGVKGRTELPG 324
Query: 312 MIDFAAKHNIRAD---IEVIPADYVNTALE 338
+++ K I D +P + +N A +
Sbjct: 325 IVEQYMKGEIALDDFVTHTMPLEDINEAFD 354
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 77.6 bits (192), Expect = 4e-16
Identities = 54/228 (23%), Positives = 85/228 (37%), Gaps = 42/228 (18%)
Query: 64 AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT 123
P G+E GVV VG+ V+ F VGD+V V
Sbjct: 55 PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSV------------IPAADLG-------- 94
Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVYSPLRFYGLDK 182
YG Y++ + VV++P+G + ++A A L +T Y L +
Sbjct: 95 ----------QYGTYAEYALVPAAAVVKLPDGLSFVEAAA-LWMQYLTAYGALVELAGLR 143
Query: 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
PG V + +G A++ A A G V + + K+ + LGA +V+ ++D +
Sbjct: 144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVIVTDEEDLV 202
Query: 242 QAAMGTMDG-----IIDTVSAVHPLMP-LIGLLKSQGKLVLVGAPEKP 283
+ G + D V P L L G LV+ GA
Sbjct: 203 AEVLRITGGKGVDVVFDPVGG--PQFAKLADALAPGGTLVVYGALSGE 248
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 4e-16
Identities = 68/251 (27%), Positives = 103/251 (41%), Gaps = 53/251 (21%)
Query: 40 VTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
V +V CG+ +DL + + +A P VPG E G V VG V FKVGD+V
Sbjct: 29 VRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRV---- 84
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158
+G R +GGY++++ V +P+G
Sbjct: 85 -MGLTR------------------------------FGGYAEVVNVPADQVFPLPDGMSF 113
Query: 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSP 217
+ A +T Y L G +PG V V GG+G A + K + VTV+ T+
Sbjct: 114 EEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPN-VTVVGTAS 172
Query: 218 SKKSEAIERLGADSFLVSRDQD---EM-QAAMGTMDGIIDTVSAVHPLMP-----LIGLL 268
+ K EA++ G + R QD E+ + + +D ++D L LL
Sbjct: 173 ASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLD------ALGGEDTRKSYDLL 226
Query: 269 KSQGKLVLVGA 279
K G+LV+ GA
Sbjct: 227 KPMGRLVVYGA 237
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 69/240 (28%), Positives = 101/240 (42%), Gaps = 44/240 (18%)
Query: 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
+ G E+ G V VG VS++KVGD+V CA+
Sbjct: 60 ILGLEVAGEVVAVGEGVSRWKVGDRV--------------CAL----------------- 88
Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
+ GGY++ + V+ +PEG L A L TV+S L G K G V
Sbjct: 89 ----VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVL 144
Query: 189 V-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
+ G G+G A++ AKA G +V + S +K A E LGAD + R++D ++
Sbjct: 145 IHGGASGIGTTAIQLAKAFGARVFTTAGSD-EKCAACEALGADIAINYREEDFVEVVKAE 203
Query: 248 MDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGS 301
G I+D V + L I L G++V +G + EL LL R + GS
Sbjct: 204 TGGKGVDVILDIVGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGS 262
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 1e-15
Identities = 50/205 (24%), Positives = 71/205 (34%), Gaps = 56/205 (27%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKN---EWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G V +V CG+C SDL + P PGHE G V +G V VGD
Sbjct: 18 GPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGD 77
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V ++ G +++ +AD V +
Sbjct: 78 RVAG------------------------------------LSGGAFAEYDLADADHAVPL 101
Query: 153 PEGTPLDATA----PLLCA--GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
P LD A PL CA G V V+G G +G + ++ A A
Sbjct: 102 PSL--LDGQAFPGEPLGCALNVFRRGWIRA-------GKTVAVIGAGFIGLLFLQLAAAA 152
Query: 207 GV-KVTVISTSPSKKSEAIERLGAD 230
G +V I P++ + A LGA
Sbjct: 153 GARRVIAIDRRPARLALA-RELGAT 176
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 3e-15
Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 36/231 (15%)
Query: 43 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
+V GIC++DL + K + +P VPGHE VG+V E VG +V VG + +
Sbjct: 30 RVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEAEL---VGKRV-VGEINIA 82
Query: 103 CRSCDSCAIDLENYCP--KVIMTYANKYHDGTITY-GGYSDIMVADEHFVVRIPEGTPLD 159
C C+ C L +CP V+ G + G +++ + + +P+ P +
Sbjct: 83 CGRCEYCRRGLYTHCPNRTVL---------GIVDRDGAFAEYLTLPLENLHVVPDLVPDE 133
Query: 160 A---TAPLLCAG-ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
PL A I P+ PG V V+G G LG + + G V ++
Sbjct: 134 QAVFAEPLAAALEILEQVPIT------PGDKVAVLGDGKLGLLIAQVLALTGPDVVLVG- 186
Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQA------AMGTMDGIIDTVSAVHP 260
S+K RLG ++ L + E A G+ G+ + V P
Sbjct: 187 RHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRP 237
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 73.8 bits (182), Expect = 5e-15
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 56/219 (25%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P+ PG+ VG V EVGS V+ FK GD+V
Sbjct: 21 PLPPGYSSVGRVVEVGSGVTGFKPGDRVFC------------------------------ 50
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLD--- 181
+G +++ +V + +V +P+G P + A L + G+
Sbjct: 51 --------FGPHAERVVVPANLLVPLPDGLPPERAALTALAATALN--------GVRDAE 94
Query: 182 -KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQD 239
+ G V VVGLG +G +A + AKA G V+ P + E E LG + V+ D
Sbjct: 95 PRLGERVAVVGLGLVGLLAAQLAKAAGA-REVVGVDPDAARRELAEALGP-ADPVAADTA 152
Query: 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
+ G D +I+ + L + LL+ +G++VLVG
Sbjct: 153 DEIGGRG-ADVVIEASGSPSALETALRLLRDRGRVVLVG 190
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 1e-14
Identities = 71/263 (26%), Positives = 120/263 (45%), Gaps = 28/263 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV IC +D+H+ + +EW + P++ GHE G V EVG V++ KVGD
Sbjct: 24 GPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGD 83
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKV-IMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
V + C C C + C I+ G T G +++ +V E + +
Sbjct: 84 YVSAETHI-VCGKCYQCRTGNYHVCQNTKIL--------GVDTDGCFAEYVVVPEENLWK 134
Query: 152 IPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 208
+ P + + PL A TV + D G V + G G +G +A+ AKA G
Sbjct: 135 NDKDIPPEIASIQEPLGNAVHTVLAG------DVSGKSVLITGCGPIGLMAIAVAKAAGA 188
Query: 209 KVTVISTSPSKKSEAIER-LGADSFLVSRDQDEMQAAMGTMDGIIDTV--SAVHPLMPLI 265
VI++ P+ + + +GAD + R++D ++ T +D V + +P
Sbjct: 189 -SLVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQ 247
Query: 266 GL--LKSQGKLVLVGAPEKPLEL 286
GL L G++ ++G P P+++
Sbjct: 248 GLKALTPGGRVSILGLPPGPVDI 270
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 2e-14
Identities = 81/292 (27%), Positives = 116/292 (39%), Gaps = 43/292 (14%)
Query: 36 GEKDVTFKVTHCGICHSDLHL----IKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
G +V + CG+CH+DLH I +E +P + GHE GVV VG V+ G
Sbjct: 25 GPGEVIVDIQACGVCHTDLHYREGGINDE-----FPFLLGHEAAGVVEAVGEGVTDVAPG 79
Query: 92 DKVGVG--CMVGSCRSCDS-----CAIDLENYCPKVIMTYANKYHDGT-----ITYGGYS 139
D V + + G CR+C C D N K+ +T DGT + G ++
Sbjct: 80 DYVVLNWRAVCGQCRACKRGRPWYC-FDTHNATQKMTLT------DGTELSPALGIGAFA 132
Query: 140 DIMVADEHFVVRI-PEGTPLDATAPLLCAGITV-YSPLRFYGLDKPGMHVGVVGLGGLGH 197
+ + ++ P P A A LL G+ G K G V V+G GG+G
Sbjct: 133 EKTLVHAGQCTKVDPAADP--AAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGD 190
Query: 198 VAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----II 252
A+ A G + +K E GA + S D ++A G +I
Sbjct: 191 AAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVI 250
Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSM 302
D V G +VLVG P + LELP + GR GG++
Sbjct: 251 DAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVF-GR---GGAL 298
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 72.9 bits (180), Expect = 2e-14
Identities = 61/218 (27%), Positives = 90/218 (41%), Gaps = 43/218 (19%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
+ G E+ GVV VG V+ +KVGD+V CA+
Sbjct: 58 SDILGLEVAGVVVAVGPGVTGWKVGDRV--------------CAL--------------- 88
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
+ GGY++ +V ++ +PEG L A L T + L G K G
Sbjct: 89 ------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGET 142
Query: 187 VGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
V + G G+G A++ AKA+G +V + S K EA LGAD + R +D +
Sbjct: 143 VLIHGGASGVGTAAIQLAKALGARVIATAGSEE-KLEACRALGADVAINYRTEDFAEEVK 201
Query: 246 GTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVG 278
G I+D V + L + L G+LVL+G
Sbjct: 202 EATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIG 238
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 3e-14
Identities = 87/313 (27%), Positives = 126/313 (40%), Gaps = 41/313 (13%)
Query: 39 DVTFKVTHCGICHSDLHLIK--NEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96
+V K+ + ICH+DL K NE A YP + GHE G+V VG V K GD V +
Sbjct: 37 EVRIKILYTSICHTDLSAWKGENEAQRA-YPRILGHEAAGIVESVGEGVEDLKAGDHV-I 94
Query: 97 GCMVGSCRSCDSCAIDLENYCP-------KVIMTYANK------------YHD-GTITYG 136
G C C C D N C K +M K YH T T+
Sbjct: 95 PIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFT 154
Query: 137 GYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGL 195
Y+ V D VV+I PL + L C G++ + + + G V + GLG +
Sbjct: 155 EYT---VLDSACVVKIDPNAPLKKMSLLSC-GVSTGVGAAWNTANVQAGSSVAIFGLGAV 210
Query: 196 GHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTM 248
G + A+A G K+ + +P K + E +G F+ +D D+ + G +
Sbjct: 211 GLAVAEGARARGASKIIGVDINPEKFEKGKE-MGITDFINPKDSDKPVHERIREMTGGGV 269
Query: 249 DGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELP--AFSLLMGRKIVGGSMIGG 305
D + V L + G VL+G P LP L GR I GS+ G
Sbjct: 270 DYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSIT-GSVFGD 328
Query: 306 MKETQEMIDFAAK 318
K ++ + A +
Sbjct: 329 FKGKSQLPNLAKQ 341
|
Length = 381 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 71.8 bits (177), Expect = 3e-14
Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 50/206 (24%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
+V +V G+ D+ + G E G+VT VGS V+ KVGD+V
Sbjct: 2 EVEVEVKAAGLNFRDVLVALGL--LPGDETPLGLECSGIVTRVGSGVTGLKVGDRV---M 56
Query: 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158
+ G ++ + D VV+IP+
Sbjct: 57 GLAP---------------------------------GAFATHVRVDARLVVKIPDSLSF 83
Query: 159 DATAPLLCAGITVYSPLRFYGLD-----KPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTV 212
+ A L A +T Y Y L + G V + GG+G A++ A+ +G +V
Sbjct: 84 EEAATLPVAYLTAY-----YALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFA 138
Query: 213 ISTSPSKKSEAIERLG-ADSFLVSRD 237
S K+ E G D SRD
Sbjct: 139 TVGSEEKREFLRELGGPVDHIFSSRD 164
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 72.2 bits (178), Expect = 3e-14
Identities = 48/170 (28%), Positives = 71/170 (41%), Gaps = 43/170 (25%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKV-----GVGCMVGSCRSCDSCAIDLENYCPKVI 121
P + G ++ GVV VG V++F+VGD+V G+G + GS
Sbjct: 58 PAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGS------------------- 98
Query: 122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD 181
++ V D + P + A L GIT + L
Sbjct: 99 ----------------LAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAV 142
Query: 182 KPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
+ G V + G GG+GHVAV+ AKA G + V +T+ S+K+ LGAD
Sbjct: 143 QAGQTVLIHGGAGGVGHVAVQLAKAAGAR--VYATASSEKAAFARSLGAD 190
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 6e-14
Identities = 60/234 (25%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P VPG + GVV VG V KVGD+V + +G R
Sbjct: 58 PYVPGSDGAGVVEAVGEGVDGLKVGDRVWL-TNLGWGRR--------------------- 95
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
G ++ +V +V +P+G + A L +T Y L K G
Sbjct: 96 --------QGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGET 147
Query: 187 VGVVG-LGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAA 244
V V G G +GH AV+ A+ G VI+T S ++ +E + + GAD+ R +D
Sbjct: 148 VLVHGGSGAVGHAAVQLARWAG--ARVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205
Query: 245 MGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
+ G II+ ++ V+ L + +L G++V+ G+ +P L+
Sbjct: 206 LAATAGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMA 258
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 7e-14
Identities = 60/231 (25%), Positives = 86/231 (37%), Gaps = 38/231 (16%)
Query: 36 GEKDVTFKVTHCGICHSDLH-------LIKNEWGNAIY----PIVPGHEIVGVVTEVGSK 84
G V KV CGIC SDLH ++ + G ++ IV GHE G V + G
Sbjct: 22 GPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPG 81
Query: 85 VS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
K KVG +V + C SC I L GGY++ M+
Sbjct: 82 TERKLKVGTRV-TSLPLLLCGQGASCGIGL-----------------SPEAPGGYAEYML 123
Query: 144 ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
E ++R+P+G ++ A PL +R L PG V+G G +G +
Sbjct: 124 LSEALLLRVPDGLSMEDAALTEPLAVG----LHAVRRARL-TPGEVALVIGCGPIGLAVI 178
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
KA GV V S ++ +GAD + A +
Sbjct: 179 AALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 71.2 bits (175), Expect = 8e-14
Identities = 58/238 (24%), Positives = 86/238 (36%), Gaps = 44/238 (18%)
Query: 49 ICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD 107
I SDL I +G+ P VPG+E VGVV EVGS VS VG +V +G
Sbjct: 38 INPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRV---LPLGG----- 89
Query: 108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167
G + + +VA ++ +P+ + A L
Sbjct: 90 ---------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYIN 122
Query: 168 GITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER 226
+T + L Y PG V +G + ++ AK +G K + + E ++
Sbjct: 123 PLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE-LKA 181
Query: 227 LGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA 279
LGAD + S +D Q +D V L L+ G LV G
Sbjct: 182 LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESAT-RLARSLRPGGTLVNYGL 238
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 1e-13
Identities = 53/198 (26%), Positives = 83/198 (41%), Gaps = 14/198 (7%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV IC +D+H+ +EW + P V GHE+ G V +G V KVGD
Sbjct: 22 GPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGD 81
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V V + C C +C + C + G T G +++ V + +
Sbjct: 82 YVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKN 133
Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
P+ P + G V++ L G V V G G +G +A+ AKA G +
Sbjct: 134 PKSIPPEYATIQEPLGNAVHTVLAG---PISGKSVLVTGAGPIGLMAIAVAKASGAYPVI 190
Query: 213 ISTSPSKKSEAIERLGAD 230
+S + E +++GA
Sbjct: 191 VSDPNEYRLELAKKMGAT 208
|
This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 71.1 bits (174), Expect = 1e-13
Identities = 65/211 (30%), Positives = 90/211 (42%), Gaps = 18/211 (8%)
Query: 34 ATGEKDVTFKVTHCGICHSDLHLIKNEW-GNAIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G DV KV CG+CH+DL N P+ GHEI G V + G+ + + +G
Sbjct: 20 ELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V V ++ C C+ C C M G GG++ +V + +
Sbjct: 79 AVIVPAVI-PCGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVV 130
Query: 153 PE------GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
E G PL+ + + A T Y GL K G V V+G GG+G V+ AKAM
Sbjct: 131 DEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGL-KKGDLVIVIGAGGVGGYMVQTAKAM 189
Query: 207 GVKVTVISTSPSKKSEAIERLGADSFLVSRD 237
G V I P K E ++ GAD L +D
Sbjct: 190 GAAVVAIDIDPE-KLEMMKGFGADLTLNPKD 219
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 70/290 (24%), Positives = 108/290 (37%), Gaps = 50/290 (17%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVP----GHEIVGVVTEVGSKVSKFKVGDKV 94
D +V +C SDL + P GHE VGVV EVGS+V+ K GD V
Sbjct: 27 DAVIRVVATCVCGSDLW-----PYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFV 81
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
+ S +C C C + + DG G Y + +AD +V++P
Sbjct: 82 -IAPFAISDGTCPFCRAGFTTSCVHG--GFWGAFVDG--GQGEYVRVPLAD-GTLVKVPG 135
Query: 155 GTPLDA--TAPLL--------------CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 198
D LL AG+ +PG V VVG G +G
Sbjct: 136 SPSDDEDLLPSLLALSDVMGTGHHAAVSAGV------------RPGSTVVVVGDGAVGLC 183
Query: 199 AVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----I 252
AV AK +G + + +S +++ A E GA + R ++ + G+ +
Sbjct: 184 AVLAAKRLGAERIIAMSRHEDRQALARE-FGATDIVAERGEEAVARVRELTGGVGADAVL 242
Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302
+ V + I + + G++ VG P +EL L + G
Sbjct: 243 ECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGP 292
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 73/296 (24%), Positives = 115/296 (38%), Gaps = 46/296 (15%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G D + T C SD+H + + ++ GHE VGVV EVGS+V FK GD+V
Sbjct: 23 GPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDRVI 82
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGY--SDIM--VADEHFVV- 150
V + + + P G + GG+ S+ V E+F V
Sbjct: 83 VPA-ITPDWRSVAA----QRGYPS---------QSGGML-GGWKFSNFKDGVFAEYFHVN 127
Query: 151 -------RIPEGTPLDATAPLLCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVA 199
+P+G D A +L ++ F+G + K G V V G+G +G +A
Sbjct: 128 DADANLAPLPDGLT-DEQAVMLPDMMST----GFHGAELANIKLGDTVAVFGIGPVGLMA 182
Query: 200 VKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDT 254
V A+ G + S + E + GA + ++ D ++ + G +I
Sbjct: 183 VAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIA 242
Query: 255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP----AFSLLMGRK-IVGGSMIGG 305
+ +LK G + V + LP + + MG K I GG GG
Sbjct: 243 GGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGG 298
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 3e-13
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 24/209 (11%)
Query: 37 EKDVTFKVTHCGICHSDLHLIK-NEWGNAIY------PIVPGHEIVGVVTEVGSKVSKFK 89
++ +V CGIC SD+HL + ++ G +Y P+V GHE GVV + G V F+
Sbjct: 51 PDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFE 110
Query: 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
GD V M+ C C +C N+C + + D G +++ + + +
Sbjct: 111 KGDPVTAEEMMW-CGMCRACRSGSPNHCKNLKELGFS--AD-----GAFAEYIAVNARYA 162
Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFY-------GLDKPGMHVGVVGLGGLGHVAVKF 202
I E + + AG V Y G +PG +V V G G +G A+
Sbjct: 163 WEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIAL 222
Query: 203 AKAMGV-KVTVISTSPSKKSEAIERLGAD 230
AKA G KV S +++ A E +GAD
Sbjct: 223 AKAAGASKVIAFEISEERRNLAKE-MGAD 250
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 69.0 bits (170), Expect = 4e-13
Identities = 56/175 (32%), Positives = 76/175 (43%), Gaps = 39/175 (22%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P V G E GVV VG V+ FKVGD+V YA
Sbjct: 55 PFVLGVEGAGVVEAVGPGVTGFKVGDRVA----------------------------YAG 86
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
G Y++ V +V++P+G + A LL G+T + LR KPG
Sbjct: 87 -------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT 139
Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQD 239
V V GG+G + ++AKA+G TVI T S +K+E GAD + RD+D
Sbjct: 140 VLVHAAAGGVGLLLTQWAKALG--ATVIGTVSSEEKAELARAAGADHVINYRDED 192
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 69.2 bits (170), Expect = 5e-13
Identities = 67/277 (24%), Positives = 108/277 (38%), Gaps = 37/277 (13%)
Query: 48 GICHSDLHLIKNEWGNAIYP-----IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
G+C +D ++ E+G A P +V GHE +GVV EVG S GD V V +
Sbjct: 36 GVCGTDREIVAGEYGTA--PPGEDFLVLGHEALGVVEEVG-DGSGLSPGDLV-VPTVRRP 91
Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHD-GTITYGGY-SDIMVADEHFVVRIPEG----- 155
C +C I ++C +Y + G G+ + V D ++V++P
Sbjct: 92 PGKCLNCRIGRPDFCET------GEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLADVG 145
Query: 156 ---TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTV 212
PL + V L + + V+G G +G +A + G +V V
Sbjct: 146 VLLEPLSVVEKAIEQAEAVQKRLPTWNPRR----ALVLGAGPIGLLAALLLRLRGFEVYV 201
Query: 213 ISTS--PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
++ P K++ +E LGA S+ +G D II+ + L
Sbjct: 202 LNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAP 261
Query: 271 QGKLVLVGAPEK--PLELPAFSLL----MGRKIVGGS 301
G ++L G P E+ L +G K + GS
Sbjct: 262 NGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGS 298
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 67.8 bits (167), Expect = 7e-13
Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 54/179 (30%)
Query: 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
V G E GVVT VG V+ VGD+V
Sbjct: 25 VLGGECAGVVTRVGPGVTGLAVGDRVMG-------------------------------- 52
Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-----KP 183
+ G ++ +V D VV IP+G + A + +T Y Y L +P
Sbjct: 53 ----LAPGAFATRVVTDARLVVPIPDGWSFEEAATVPVVFLTAY-----YALVDLARLRP 103
Query: 184 GMHVGV-VGLGGLGHVAVKFAKAMGVKV--TVISTSPSKKSEAIERLG--ADSFLVSRD 237
G V + GG+G A++ A+ +G +V T SP K+ + + LG D SRD
Sbjct: 104 GESVLIHAAAGGVGQAAIQLARHLGAEVFATA--GSPEKR-DFLRALGIPDDHIFSSRD 159
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 67.5 bits (166), Expect = 1e-12
Identities = 72/233 (30%), Positives = 106/233 (45%), Gaps = 40/233 (17%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAIY--PIVPGHEIVGVVTEVGSKVSKFKVGD 92
G DV KV IC +D+H+ +EW P+V GHE VG V EVGS+V+ FKVGD
Sbjct: 24 GPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGD 83
Query: 93 KV-GVGCMV-GSCRSCDSCAIDLENYCPKVIMTYANKYH-------DGTITYGGYSDIMV 143
+V G G +V G CR+C A + H G G +++ +V
Sbjct: 84 RVSGEGHIVCGHCRNC-----------------RAGRRHLCRNTKGVGVNRPGAFAEYLV 126
Query: 144 ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
V +IP+ P D A P G V++ L F D G V + G G +G +A
Sbjct: 127 IPAFNVWKIPDDIPDDLAAIFDPF---GNAVHTALSF---DLVGEDVLITGAGPIGIMAA 180
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTMDGI 251
AK +G + VI+ + E ++GA + +D ++ A +G +G
Sbjct: 181 AVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGF 233
|
Length = 341 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98
D ++T IC SDLH+ + G A +V GHE +G V EVGS V KVGD+V V
Sbjct: 27 DAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPF 85
Query: 99 MVGSCRSCDSCAIDLENYC 117
V C C +C L C
Sbjct: 86 NVA-CGRCRNCKRGLTGVC 103
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 3e-12
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 20/260 (7%)
Query: 34 ATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
A GE V KV GIC SD H+ + A YP V GHE GV+ VG V ++G++
Sbjct: 23 AAGE--VRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGER 80
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
V V ++ SC C C+I N C +++ G GG+S+ V RIP
Sbjct: 81 VAVDPVI-SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIP 132
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTV 212
+ D A ++ T+ + + + G G +G V+ K + VK +
Sbjct: 133 DAIA-DQYAVMV-EPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVI 190
Query: 213 ISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV---SAVHP--LMPLIGL 267
++ ++ + GAD ++++ Q+ + A+ GI T+ +A HP L + L
Sbjct: 191 VADRIDERLALAKESGAD-WVINNAQEPLGEAL-EEKGIKPTLIIDAACHPSILEEAVTL 248
Query: 268 LKSQGKLVLVGAPEKPLELP 287
++VL+G +P E+
Sbjct: 249 ASPAARIVLMGFSSEPSEIV 268
|
Length = 339 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 9e-12
Identities = 63/237 (26%), Positives = 83/237 (35%), Gaps = 28/237 (11%)
Query: 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVG-----CMVGSCRSCDSCAIDLENYCPKVIMT 123
V GHEIVG V + + G + +G + C C C L C +
Sbjct: 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60
Query: 124 YANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL--------DAT-APLLCAGITVYSP 174
G GGY+ EH +P GT + DA AP CA TV +
Sbjct: 61 GHEALDSGWPLSGGYA------EHCH--LPAGTAIVPVPDDLPDAVAAPAGCATATVMAA 112
Query: 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234
L G D G V VVG G LG A A A G V + + E GA +
Sbjct: 113 LEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAE 171
Query: 235 SRDQDEMQAAM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG--APEKPLEL 286
E Q + +D ++ A + + L G VL G P P+ L
Sbjct: 172 PEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVAL 228
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 2e-11
Identities = 58/200 (29%), Positives = 78/200 (39%), Gaps = 47/200 (23%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVP---GHEIVGVVTEVGSKVSKFKVGD 92
G +V K GI SD++ + + P P G E VG V VG V+ FKVGD
Sbjct: 29 GPGEVLVKNRFVGINASDINFTAGRYDPGVKP--PFDCGFEGVGEVVAVGEGVTDFKVGD 86
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V T+++G +++ V V +
Sbjct: 87 AVA------------------------------------TMSFGAFAEYQVVPARHAVPV 110
Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GLGGLGHVAVKFAKAMGVKVT 211
PE P PLL +G+T L G K G V V GG G AV+ AK G
Sbjct: 111 PELKP--EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAG--CH 166
Query: 212 VIST-SPSKKSEAIERLGAD 230
VI T S +K+E ++ LG D
Sbjct: 167 VIGTCSSDEKAEFLKSLGCD 186
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 45/183 (24%)
Query: 66 YPIVPGH------EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK 119
YP PG E+ G V +VGS V +FK GD+V + + G
Sbjct: 52 YPPPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRV-MALLPG------------------ 92
Query: 120 VIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG 179
GGY++ VA + V+ IP+G + A + A +T + L+ +G
Sbjct: 93 ----------------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHG 136
Query: 180 LDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
K G V + G G+G A + A+ G T+I+TS +K + ++L A ++ R
Sbjct: 137 DVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAA--IILIRYP 193
Query: 239 DEM 241
DE
Sbjct: 194 DEE 196
|
Length = 334 |
| >gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 5e-11
Identities = 81/333 (24%), Positives = 129/333 (38%), Gaps = 42/333 (12%)
Query: 39 DVTFKVTHCGICHSDLHLIKNEW-GNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97
++ KV +C SDL + W A++P + GHE G+V +G V++F+ GD V +
Sbjct: 39 EIRIKVVSTSLCRSDL----SAWESQALFPRIFGHEASGIVESIGEGVTEFEKGDHV-LT 93
Query: 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD---------GTITY-----GGYSDIMV 143
G C SC C N C + + H G Y +S+ V
Sbjct: 94 VFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTV 153
Query: 144 ADEHFVVRIPEGTPLDATAPLLC---AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
V++ PL L C AG+ + + K G V + GLG +G
Sbjct: 154 VHSGCAVKVDPLAPLHKICLLSCGVAAGLG--AAWNVADVSK-GSSVVIFGLGTVGLSVA 210
Query: 201 KFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE--MQAAMGTMDGIID-TVS 256
+ AK G ++ + +P K +A + G F+ D E Q G D +
Sbjct: 211 QGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFE 269
Query: 257 AVHPLMPLIGLLKS----QGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMIGGMKETQE 311
V L+S G V +G P+ E+ A + L + + + GS+ GG K +
Sbjct: 270 CVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSD 329
Query: 312 ---MIDFAAKHNIRADIEV---IPADYVNTALE 338
++D I D + + D +N A E
Sbjct: 330 LPSLVDKYMNKEIMIDEFITHNLSFDEINKAFE 362
|
Length = 378 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 62.9 bits (154), Expect = 5e-11
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 53/238 (22%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P + G + GVV VGS+V+ FKVGD+V
Sbjct: 60 PKILGWDASGVVEAVGSEVTLFKVGDEV-------------------------------- 87
Query: 127 KYHDGTITY-GGYSDIMVADEHFVVRIPEG-TPLDATA-PLLCAGITVYSPL--RFYGLD 181
Y+ G IT G ++ + DE V P+ + +A A PL +T + L R G+
Sbjct: 88 -YYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPL--TSLTAWEALFDRL-GIS 143
Query: 182 KPGMHVG-----VVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA-IERLGADSFLVS 235
+ + G + G GG+G +A++ AK + +TVI+T+ +S A ++ LGAD +++
Sbjct: 144 EDAENEGKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIATASRPESIAWVKELGAD-HVIN 201
Query: 236 RDQD---EMQA-AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF 289
QD +++A + +D I + L+ QG + L+ P++PL+L
Sbjct: 202 HHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQEPLDLGPL 259
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 7e-11
Identities = 70/270 (25%), Positives = 109/270 (40%), Gaps = 30/270 (11%)
Query: 37 EKDVTFKVTHCGICHSDLHLIKN-EWGNAI--YPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
++T GIC SDLH + + GN + P+V GHE++G + S S K G
Sbjct: 27 NNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSDS--SGLKEGQT 84
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY-----GGYSDIMVADEHF 148
V + C C C EN C M + G+ Y GG++ V D
Sbjct: 85 VAIN-PSKPCGHCKYCLSHNENQC--TTMRFF-----GSAMYFPHVDGGFTRYKVVDTAQ 136
Query: 149 VVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
+ PE A PL A + G D G V V G+G +G + V K
Sbjct: 137 CIPYPEKADEKVMAFAEPLAVAIHAAHQA----G-DLQGKRVFVSGVGPIGCLIVAAVKT 191
Query: 206 MGVKVTVISTSPSKKSEAIER-LGADSFL--VSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262
+G ++ S +S ++ R +GAD + + D D +A G D + +
Sbjct: 192 LGAA-EIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSIN 250
Query: 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
+ + +++G +V VG P E P +L+
Sbjct: 251 TCLEVTRAKGVMVQVGMGGAPPEFPMMTLI 280
|
Length = 343 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 61.3 bits (149), Expect = 1e-10
Identities = 43/165 (26%), Positives = 64/165 (38%), Gaps = 38/165 (23%)
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP PG E GVV VG V++ VGD+V G
Sbjct: 37 YPFTPGFEASGVVRAVGPHVTRLAVGDEVIA--GTGE----------------------- 71
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
+ GG++ ++ E VVR P + L +TV GL G
Sbjct: 72 --------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGL-AKGE 122
Query: 186 HVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLG 228
H+ + GG G +AV+ A+ G + +T+ S K E +++LG
Sbjct: 123 HILIQTATGGTGLMAVQLARLKG--AEIYATASSDDKLEYLKQLG 165
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 1e-10
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 46/210 (21%)
Query: 37 EKDVTFKVTHCGICHSDLHLIKNEWGNAI---YPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
E DV +V + + + D + + G I YP +PG ++ G V E S +FK GD+
Sbjct: 27 EGDVLIRVAYSSVNYKDG--LASIPGGKIVKRYPFIPGIDLAGTVVE--SNDPRFKPGDE 82
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
V I+T Y G +GGYS+ +VV +P
Sbjct: 83 V--------------------------IVT---SYDLGVSHHGGYSEYARVPAEWVVPLP 113
Query: 154 EG-TPLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMG 207
+G T +A TA A ++++ L GL V V G GG+G +AV +G
Sbjct: 114 KGLTLKEAMILGTAG-FTAALSIHR-LEENGLTPEQGPVLVTGATGGVGSLAVSILAKLG 171
Query: 208 VKVTVISTSPSKKSEAIERLGADSFLVSRD 237
+V V ST + ++ +++LGA ++ R+
Sbjct: 172 YEV-VASTGKADAADYLKKLGAKE-VIPRE 199
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 6e-10
Identities = 63/290 (21%), Positives = 105/290 (36%), Gaps = 45/290 (15%)
Query: 48 GICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD 107
G+ S++ + + +P V G E VG V E F G +V M G R+ D
Sbjct: 38 GLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRV-ATAMGGMGRTFD 94
Query: 108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167
G Y++ + V I A L
Sbjct: 95 ----------------------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPET 126
Query: 168 GITVYSPLRFYGLD-KPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225
T + L F L +PG + + G +G A+K AKA+G VT + SP + ++
Sbjct: 127 YYTAWGSL-FRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA-ALLK 184
Query: 226 RLGADSFLVSR--DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP 283
LGAD ++ ++++AA G D +++ V L + L+ G + + G
Sbjct: 185 ELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLGGQ 243
Query: 284 LELPAFSLLM------GRKIVGGSMIGGMKET-QEMIDFAAKHNIRADIE 326
L F+ + + G S + QE+ DF A ++
Sbjct: 244 WTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPS 293
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 56/233 (24%), Positives = 91/233 (39%), Gaps = 44/233 (18%)
Query: 51 HSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCA 110
+ ++ +P+ G + GVV ++GS V F++GD+V
Sbjct: 58 NKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPP---------- 107
Query: 111 IDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170
+ GT +++ +V E+ V + P+ + A L AG+T
Sbjct: 108 -----------------WSQGT-----HAEYVVVPENEVSKKPKNLSHEEAASLPYAGLT 145
Query: 171 VYSPLRFYGLDKPGMHVG--VV---GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225
+S L G P G V+ G GG+G A++ KA G VT T + ++
Sbjct: 146 AWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTT--TCSTDAIPLVK 203
Query: 226 RLGADSFLVSRDQDEMQA--AMGTMDGIIDTV-SAVHPLMPLIGLLKSQGKLV 275
LGAD + ++D + G D I+DTV + LLK G V
Sbjct: 204 SLGADDVIDYNNEDFEEELTERGKFDVILDTVGGDTEKWA--LKLLKKGGTYV 254
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 2e-09
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 29/226 (12%)
Query: 61 WGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK 119
WG + +P + G +IVG V VG V ++G++V V D D P
Sbjct: 71 WGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLV----------DPSIRDPPEDDPA 120
Query: 120 VIMTYANKYHDGTITYGGYSDIMV--ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177
I ++ GG+++ V A+ + V P AT P C+ T + L
Sbjct: 121 DIDYIGSERD------GGFAEYTVVPAENAYPVNSPLSDVELATFP--CSYSTAENMLER 172
Query: 178 YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR 236
G+ G V V G GG+G V+ AK G V + + K EA+ LGAD+ + R
Sbjct: 173 AGV-GAGETVLVTGASGGVGSALVQLAKRRGAIVIAV-AGAA-KEEAVRALGADTV-ILR 228
Query: 237 DQDEMQAAMGTMDGIIDTVSAV--HPLMP-LIGLLKSQGKLVLVGA 279
D + A +D V+ V PL P L+ LL+ G+ V GA
Sbjct: 229 DAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGA 274
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 2e-09
Identities = 60/225 (26%), Positives = 91/225 (40%), Gaps = 56/225 (24%)
Query: 36 GEKDVTFKVTHCGICHSDL---HLIKNEWGNAIY------PIVPGHEIVGVVTEVGSKVS 86
G ++ KV CGIC D+ H + WG+ P++PGHE VG V E+G
Sbjct: 23 GPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAE 82
Query: 87 K--FKVGDKVG----VGCMVGSCRSCDSCAIDLENY--CPKVIMTYANKYHDGTITYGGY 138
+ KVGD+V V C +CR C+ Y C K + Y GG
Sbjct: 83 ERGVKVGDRVISEQIVPC--WNCRFCNR-----GQYWMCQK-----HDLYGFQNNVNGGM 130
Query: 139 SDIMV-ADEHFVVRIPEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHV------- 187
++ M E V ++P+ P + PL CA + +D+ +
Sbjct: 131 AEYMRFPKEAIVHKVPDDIPPEDAILIEPLACA---------LHAVDRANIKFDDVVVLA 181
Query: 188 --GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
G +GLG +G +K K K+ V+ + + A + GAD
Sbjct: 182 GAGPLGLGMIGAARLKNPK----KLIVLDLKDERLALA-RKFGAD 221
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 1e-08
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 25/181 (13%)
Query: 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
+ G + GVV VG V+++KVGD+V V SC D A D + P M + +
Sbjct: 80 IIGSDASGVVWRVGPGVTRWKVGDEV-----VASCLQVDLTAPDGRDGDP---MLSSEQR 131
Query: 129 HDGTIT-YGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVY------SPLRFYGL 180
G T +G +++ + ++ ++ P+ T +A P L T Y +P
Sbjct: 132 IWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGA-TAYRQLVGWNPAAV--- 187
Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
KPG +V + G GGLG A + A+A G V V+S SP +K+E LGA++ + D
Sbjct: 188 -KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVS-SP-EKAEYCRSLGAEAVIDRNDF 244
Query: 239 D 239
Sbjct: 245 G 245
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 45/200 (22%)
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV-GCMVGSCRSCDSCAIDLENYCPKVIMTY 124
YP PG + G V V S +F+ GD+V V G +G M
Sbjct: 57 YPHTPGIDAAGTV--VSSDDPRFREGDEVLVTGYDLG--------------------MNT 94
Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATA---PLLCAGITVYSPLRFYGL 180
GG+++ + +VV +PEG + +A A ++V+ L G
Sbjct: 95 D----------GGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVH-RLEDNGQ 143
Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-- 237
V V G GG+G +AV +G V ++ +++ ++ LGA S ++ R+
Sbjct: 144 TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE-QADYLKSLGA-SEVLDREDL 201
Query: 238 QDEMQAAM--GTMDGIIDTV 255
DE + + G IDTV
Sbjct: 202 LDESKKPLLKARWAGAIDTV 221
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 2e-08
Identities = 49/218 (22%), Positives = 71/218 (32%), Gaps = 61/218 (27%)
Query: 34 ATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPI----------VPGHEIVGVVTEVGS 83
+V K+ I +D++ I +YPI V G+E VG V +VGS
Sbjct: 26 PGPPNEVLVKMLAAPINPADINQI-----QGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80
Query: 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIM 142
V K GD V I GT T+
Sbjct: 81 GVKSLKPGDWV--------------------------IPLRPGL---GTWRTHA------ 105
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV----GLGGLGHV 198
V ++++P + A L T Y L + +PG V +G
Sbjct: 106 VVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPG---DWVIQNGANSAVGQA 162
Query: 199 AVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSFL 233
++ AK +G+K + E ERL GAD L
Sbjct: 163 VIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVL 200
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 6e-08
Identities = 70/268 (26%), Positives = 98/268 (36%), Gaps = 72/268 (26%)
Query: 65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
YP+VPG+E VG V E G F+ GD+V + P
Sbjct: 57 GYPLVPGYESVGRVVEAGPDTG-FRPGDRV---------------------FVPG----- 89
Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRI-----PEGT--PLDATAPLLCAGITVYSPLRF 177
+N Y D +GG S +V V R+ P+G L ATA AG V
Sbjct: 90 SNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQGALLALAATARHAVAGAEVKVL--- 146
Query: 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLV-- 234
+VG G LG + + KA G V T+P + R GA + V
Sbjct: 147 --------PDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRR------RDGATGYEVLD 192
Query: 235 -----SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL--- 286
RD + A G +IDT L+ L G++VL G +P+
Sbjct: 193 PEKDPRRDYRAIYDASGDP-SLIDT---------LVRRLAKGGEIVLAGFYTEPVNFDFV 242
Query: 287 PAFSLLMGRKIVGGSMIGGMKETQEMID 314
PAF +I G + +E+I+
Sbjct: 243 PAFMKEARLRIAAEWQPGDLHAVRELIE 270
|
[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.1 bits (123), Expect = 3e-07
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 16/183 (8%)
Query: 130 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG---ITVYSPLRFYGLDKPGMH 186
D + G+ + ++D + ++ +P +A L G +T Y L G K G
Sbjct: 95 DIVVGVSGWQEYAISDGEGLRKLDP-SPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGET 153
Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EM-- 241
V V G +G V + AK G +V I+ K E LG D+ + + +D +
Sbjct: 154 VVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALK 213
Query: 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA------PEKPLELPAFSLLMGR 295
+A +D + V L ++ LL ++ + GA PE P LLM +
Sbjct: 214 EACPKGIDVYFENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAK 272
Query: 296 KIV 298
++
Sbjct: 273 RLR 275
|
Length = 340 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 47/165 (28%), Positives = 64/165 (38%), Gaps = 36/165 (21%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P VPG E+ GVV VG V +G +V
Sbjct: 60 PYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAG------------------------ 95
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
GGY+++ VAD + +P+G L+A ++ G T L L PG
Sbjct: 96 ---------GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATL-TPGDV 145
Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
V V GGLG + V+ AKA G V + P K+ + LGAD
Sbjct: 146 VLVTAAAGGLGSLLVQLAKAAGATVVGAAGGP-AKTALVRALGAD 189
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 7e-07
Identities = 56/245 (22%), Positives = 96/245 (39%), Gaps = 59/245 (24%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P + G + GVV VG +V+ FK GD+V
Sbjct: 59 PKILGWDAAGVVVAVGDEVTLFKPGDEV-------------------------------- 86
Query: 127 KYHDGTITY-GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKP 183
++ G I G ++ + DE V P+ A L IT + L R G++ P
Sbjct: 87 -WYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL-GINDP 144
Query: 184 GMHVG-----VVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRD 237
+ G GG+G + ++ A+ + +TVI+T S + E + LGA ++
Sbjct: 145 VAGDKRALLIIGGAGGVGSILIQLARQL-TGLTVIATASRPESQEWVLELGAH-HVIDHS 202
Query: 238 QDEMQAAMGTMDGIIDTVSAVHPLM-------PLIGLLKSQGKLVLVGAPE----KPLEL 286
+ ++A + + ++ VS V L ++ LL QG+ L+ P P +
Sbjct: 203 KP-LKAQLEKLG--LEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISPFKR 259
Query: 287 PAFSL 291
+ SL
Sbjct: 260 KSISL 264
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 71 GHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCP-KVIMTYANKYH 129
G + G+V VG V +KVGD+V V C V + D + P + I Y
Sbjct: 86 GSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGD-PMFDPSQRIWGYET--- 141
Query: 130 DGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD--KPGMHV 187
YG ++ + ++ P+ + A + G T Y L + + KPG +V
Sbjct: 142 ----NYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNV 197
Query: 188 GVVG-LGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
+ G GGLG +A++ A+A G V V+S S K+E LGA+ + RD D
Sbjct: 198 LIWGASGGLGSMAIQLARAAGANPVAVVS-SEE-KAEYCRALGAEGVINRRDFD 249
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 1e-06
Identities = 54/212 (25%), Positives = 80/212 (37%), Gaps = 44/212 (20%)
Query: 23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVG 82
VL F+ E +V + GI + D ++ + P G E GVV++VG
Sbjct: 14 EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVG 73
Query: 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM 142
S V KVGD+V YA G YS +
Sbjct: 74 SGVKHIKVGDRV----------------------------VYAQS------ALGAYSSVH 99
Query: 143 VADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG----MHVGVVGLGGLGHV 198
+P+ + A G+TVY LR KP H GG+G +
Sbjct: 100 NVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA---GGVGLI 156
Query: 199 AVKFAKAMGVKVTVISTSPS-KKSEAIERLGA 229
A ++AKA+G K +I T S +K++ ++ GA
Sbjct: 157 ACQWAKALGAK--LIGTVGSAQKAQRAKKAGA 186
|
Length = 327 |
| >gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 2e-06
Identities = 30/83 (36%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 28 FHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP--IVPGHEIVGVVTEVGSKV 85
E V KV IC SD H+++ G P +V GHEI G V E G V
Sbjct: 24 LELPDGRKCEHGVILKVVTTNICGSDQHMVR---GRTTAPTGLVLGHEITGEVIEKGRDV 80
Query: 86 SKFKVGDKVGVGCMV--GSCRSC 106
K+GD V V + G CR+C
Sbjct: 81 EFIKIGDIVSVPFNIACGRCRNC 103
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393 |
| >gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 5e-06
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 51/232 (21%)
Query: 37 EKDVTFKVTHCGICHSDLHLIKNEWGNAI---YPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
E DV KV + + + D I + YP++PG + G V V S+ +F+ GD+
Sbjct: 26 EGDVLIKVAYSSLNYKDALAITG--KGGVVRSYPMIPGIDAAGTV--VSSEDPRFREGDE 81
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
V Y G GGYS ++V +P
Sbjct: 82 V-----------------------------IVTGYGLGVSHDGGYSQYARVPADWLVPLP 112
Query: 154 EG-TPLDATAPLLCAGITVYSPLRFYGLDKPGMH-----VGVVGL-GGLGHVAVKFAKAM 206
EG + +A A L AG T + L L++ G+ V V G GG+G +AV +
Sbjct: 113 EGLSLREAMA-LGTAGFT--AALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKL 169
Query: 207 GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA---AMGTMDGIIDTV 255
G +V V ST +++ + ++ LGA S ++ R+ G +DTV
Sbjct: 170 GYEV-VASTGKAEEEDYLKELGA-SEVIDREDLSPPGKPLEKERWAGAVDTV 219
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323 |
| >gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 48/201 (23%)
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
+P+VPG ++ G V E S +FK GD+V
Sbjct: 57 FPLVPGIDLAGTVVE--SSSPRFKPGDRV-----------------------------VL 85
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGIT----VYSPLRFYGL 180
+ G +GGY+ ++V +PEG + A A + AG T V + L +G+
Sbjct: 86 TGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMA-IGTAGFTAMLCVMA-LEDHGV 143
Query: 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239
V V G GG+G VAV +G +V + P +++ + LGA + D+
Sbjct: 144 TPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE-EADYLRSLGASEII---DRA 199
Query: 240 EMQAAMGTMD-----GIIDTV 255
E+ + G +DTV
Sbjct: 200 ELSEPGRPLQKERWAGAVDTV 220
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324 |
| >gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 184 GMHVGVVGLGGLG-HVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
G V +VGLG +G +A + AKA G++V + S ++ + DE+
Sbjct: 134 GKTVLIVGLGDIGREIA-RRAKAFGMRVIGVRRSGRPAPPVVDEV--------YTPDELD 184
Query: 243 AAMGTMDGII 252
+ D ++
Sbjct: 185 ELLPEADYVV 194
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313 |
| >gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 4e-05
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GG 194
G +++++ ++ +P+G A L AG+T LR G G V V G GG
Sbjct: 86 GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGG-PLLGRRVLVTGASGG 144
Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
+G AV+ A G V + SP ++E + LGA +V + + +D ++D+
Sbjct: 145 VGRFAVQLAALAGAHVVAVVGSP-ARAEGLRELGAAEVVVGGS----ELSGAPVDLVVDS 199
Query: 255 VSAVHPLM-PLIGLLKSQGKLVLVGA 279
V P + + LL G +V VG+
Sbjct: 200 VGG--PQLARALELLAPGGTVVSVGS 223
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305 |
| >gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Score = 42.8 bits (102), Expect = 5e-05
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI 224
+ P G + G VG++GLG +G + KA G+KV P ++EA+
Sbjct: 23 WRPDALLGRELSGKTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEAEAL 75
|
This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 60/249 (24%), Positives = 94/249 (37%), Gaps = 63/249 (25%)
Query: 32 RRATGEKDVTFKVTHCGICHSDLHLIKNE--WGNAIYPIVPGHEIVGVVTEVGSKV-SKF 88
+ ++ KV + DL + N + + G + GV+ +VGS V S++
Sbjct: 23 PNCYKDNEIVVKVHAAALNPVDL-KLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81
Query: 89 KVGDKV-----GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMV 143
KVGD+V G+ +D PK
Sbjct: 82 KVGDEVCGIYPHPYGGQGTL--SQYLLVD-----PKK----------------------- 111
Query: 144 ADEHFVVRIPEGTPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVG----VVGLGG---L 195
D+ + R PE L+ A A L G T Y L+ G +G V+ LGG +
Sbjct: 112 -DKKSITRKPENISLEEAAAWPLVLG-TAYQ-----ILEDLGQKLGPDSKVLVLGGSTSV 164
Query: 196 GHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-------VSRDQDEMQAAMGT- 247
G A++ AK TV+ T S+ +E ++LGAD F+ V + ++ G
Sbjct: 165 GRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQG 224
Query: 248 -MDGIIDTV 255
D I+D V
Sbjct: 225 KFDLILDCV 233
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|183914 PRK13243, PRK13243, glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA 229
+ PL F G D G +G++G G +G + AK G++ ++ S ++K EA + LGA
Sbjct: 136 VAWHPLMFLGYDVYGKTIGIIGFGRIGQAVARRAKGFGMR--ILYYSRTRKPEAEKELGA 193
Query: 230 D 230
+
Sbjct: 194 E 194
|
Length = 333 |
| >gnl|CDD|240622 cd05198, formate_dh_like, Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxy acid dehydrogenase family | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
F G + G VG+VGLG +G K +A G+K V+ ++K E E LG
Sbjct: 130 WAGFPGYELEGKTVGIVGLGRIGQRVAKRLQAFGMK--VLYYDRTRKPEPEEDLGFR 184
|
Formate dehydrogenase, D-specific 2-hydroxy acid dehydrogenase, Phosphoglycerate Dehydrogenase, Lactate dehydrogenase, Thermostable Phosphite Dehydrogenase, and Hydroxy(phenyl)pyruvate reductase, among others, share a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase, among others. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 302 |
| >gnl|CDD|240655 cd12178, 2-Hacid_dh_13, Putative D-isomer specific 2-hydroxyacid dehydrogenases, NAD-binding and catalytic domains | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.001
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER-LGAD 230
+PL F G + G +G++G+G +G + AKA G+K ++ + + SE E+ LGA
Sbjct: 133 APLFFLGHELAGKTLGIIGMGRIGQAVARRAKAFGMK--ILYYNRHRLSEETEKELGAT 189
|
2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 317 |
| >gnl|CDD|223189 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.002
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225
F G + G VG++GLG +G K KA G+KV ++ ++
Sbjct: 133 KAFRGTELAGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVD 183
|
Length = 324 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 99.98 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.97 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.96 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.96 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.95 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.9 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.71 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.51 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.49 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.38 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.67 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.65 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.57 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.56 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 98.51 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.39 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.37 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.34 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 98.26 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.19 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 98.13 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 98.12 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.07 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.01 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.01 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 97.96 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 97.8 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.7 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 97.69 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.64 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 97.59 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 97.57 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.54 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 97.53 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.52 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.45 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.44 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.44 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.38 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.34 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.31 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 97.31 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 97.3 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.29 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.27 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.27 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.22 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.21 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.21 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 97.17 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.16 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.15 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 97.12 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.12 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.11 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.11 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.07 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.06 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.06 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 97.06 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.06 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 97.06 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.05 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.05 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.04 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.04 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.03 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 97.03 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.01 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.01 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.97 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 96.96 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 96.95 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.91 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 96.91 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.91 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.9 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 96.89 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 96.88 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.88 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.88 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.87 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 96.87 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 96.86 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.86 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.85 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.84 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.83 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 96.82 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.81 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK07340 | 304 | ornithine cyclodeaminase; Validated | 96.81 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 96.75 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.74 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 96.74 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 96.73 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 96.71 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.71 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 96.7 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 96.7 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.7 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 96.69 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.69 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 96.68 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.68 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 96.67 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 96.66 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.65 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 96.65 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 96.64 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 96.64 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.64 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.62 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.62 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 96.61 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.59 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 96.59 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 96.58 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.58 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.58 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 96.57 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.57 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.56 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.55 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 96.54 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.53 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.52 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.52 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.51 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 96.51 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.5 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.5 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 96.46 | |
| PRK05717 | 255 | oxidoreductase; Validated | 96.45 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.45 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 96.45 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.45 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 96.44 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 96.43 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.43 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 96.42 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.42 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.41 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 96.41 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 96.41 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.38 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 96.38 | |
| PRK14188 | 296 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.37 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 96.36 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.35 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 96.35 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 96.32 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 96.32 | |
| COG2423 | 330 | Predicted ornithine cyclodeaminase, mu-crystallin | 96.31 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 96.3 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.28 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.26 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.24 | |
| COG1648 | 210 | CysG Siroheme synthase (precorrin-2 oxidase/ferroc | 96.24 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.24 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 96.21 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 96.21 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 96.18 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 96.18 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 96.18 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 96.17 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.17 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 96.16 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 96.15 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.14 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 96.12 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.12 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 96.09 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 96.09 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 96.09 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 96.08 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 96.08 | |
| PRK14178 | 279 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.07 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 96.07 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.06 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.06 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 96.05 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.04 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.04 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.03 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 96.03 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 96.03 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.02 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 96.02 | |
| PRK08643 | 256 | acetoin reductase; Validated | 96.02 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 96.02 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.01 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 96.01 | |
| PRK14179 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.01 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 96.0 | |
| PRK14172 | 278 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.99 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 95.99 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.98 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 95.98 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 95.98 | |
| PRK14176 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.97 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.97 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 95.96 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 95.95 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 95.93 | |
| PRK08291 | 330 | ectoine utilization protein EutC; Validated | 95.93 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 95.92 | |
| PRK14177 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.92 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 95.92 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 95.91 | |
| PRK06823 | 315 | ornithine cyclodeaminase; Validated | 95.9 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.9 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 95.88 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 95.88 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.87 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 95.87 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 95.86 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 95.86 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 95.85 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 95.84 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.84 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 95.83 | |
| PRK05562 | 223 | precorrin-2 dehydrogenase; Provisional | 95.83 | |
| PRK14190 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.81 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 95.8 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 95.8 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 95.79 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 95.79 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 95.78 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.78 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 95.77 | |
| PRK10258 | 251 | biotin biosynthesis protein BioC; Provisional | 95.77 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 95.76 | |
| cd01079 | 197 | NAD_bind_m-THF_DH NAD binding domain of methylene- | 95.76 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 95.74 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 95.73 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 95.73 | |
| TIGR01532 | 325 | E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas | 95.72 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 95.72 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.71 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 95.68 | |
| PRK14180 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.67 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 95.66 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 95.65 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 95.64 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 95.64 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 95.64 | |
| PLN02516 | 299 | methylenetetrahydrofolate dehydrogenase (NADP+) | 95.64 | |
| PRK14170 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.63 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.63 | |
| PRK14187 | 294 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.63 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.63 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 95.62 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.6 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 95.59 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.59 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 95.57 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 95.56 | |
| PRK14186 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.56 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 95.56 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 95.56 | |
| PRK14173 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.56 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 95.53 | |
| PRK14169 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.53 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 95.52 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 95.51 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 95.51 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 95.5 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 95.5 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.49 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 95.48 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 95.48 | |
| PRK14166 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.46 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 95.42 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 95.41 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.39 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.38 | |
| PRK14171 | 288 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.37 | |
| PLN02616 | 364 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 95.37 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.36 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 95.35 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 95.35 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 95.35 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 95.35 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 95.34 | |
| PLN02897 | 345 | tetrahydrofolate dehydrogenase/cyclohydrolase, put | 95.34 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 95.34 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 95.34 | |
| PRK14183 | 281 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.32 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 95.31 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 95.3 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 95.3 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.3 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 95.3 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 95.3 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 95.29 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 95.29 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 95.28 | |
| PRK14182 | 282 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.27 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 95.27 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 95.27 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 95.26 | |
| COG0334 | 411 | GdhA Glutamate dehydrogenase/leucine dehydrogenase | 95.26 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 95.25 | |
| TIGR02371 | 325 | ala_DH_arch alanine dehydrogenase, Archaeoglobus f | 95.25 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 95.24 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 95.24 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 95.23 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.23 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.22 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.22 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.22 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 95.21 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.2 | |
| smart00846 | 149 | Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, | 95.2 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 95.2 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 95.19 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.18 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.17 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.15 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.15 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 95.14 | |
| PRK06407 | 301 | ornithine cyclodeaminase; Provisional | 95.14 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.12 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 95.12 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 95.11 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 95.11 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 95.1 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 95.09 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 95.09 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 95.07 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 95.07 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.06 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.06 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 95.06 | |
| PRK14181 | 287 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.04 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 95.04 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 95.03 | |
| PRK14184 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.02 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 95.02 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 95.02 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.01 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 95.01 | |
| PRK14193 | 284 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.0 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 94.98 | |
| PRK14168 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.98 | |
| PRK14185 | 293 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.98 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 94.97 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 94.96 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 94.94 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 94.94 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 94.9 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.9 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 94.9 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 94.89 | |
| PRK06932 | 314 | glycerate dehydrogenase; Provisional | 94.89 | |
| PTZ00079 | 454 | NADP-specific glutamate dehydrogenase; Provisional | 94.89 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 94.87 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 94.84 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 94.84 | |
| PRK14167 | 297 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.83 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 94.83 | |
| PRK06046 | 326 | alanine dehydrogenase; Validated | 94.81 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 94.77 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 94.75 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 94.75 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 94.74 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 94.74 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 94.74 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 94.74 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 94.74 | |
| PRK06487 | 317 | glycerate dehydrogenase; Provisional | 94.71 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 94.66 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 94.66 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 94.64 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.64 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 94.63 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 94.63 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 94.63 |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-68 Score=474.49 Aligned_cols=333 Identities=45% Similarity=0.732 Sum_probs=308.2
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+|++.++...++| +++++++.|+|+|+||+|+|+++|+|++|+|..+|.++...+|.+||||.+|+|+++|++|++|+
T Consensus 3 ~mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 3 TMKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred ceEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 6666666555555 88999999999999999999999999999999999999989999999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||.+..+..+|++|.||++|.+++|++.... |++.+|+|+||+++|+.+++++|+++++++||++.|++.
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGi 153 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGI 153 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCee
Confidence 9999999788889999999999999999986544 567899999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
|.|++|+. .+++||++|+|+|.|++|.+++|+|+++|++|+++++++++. +++++||++++++.++++...++.+.+|
T Consensus 154 T~y~alk~-~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~-e~a~~lGAd~~i~~~~~~~~~~~~~~~d 231 (339)
T COG1064 154 TTYRALKK-ANVKPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKL-ELAKKLGADHVINSSDSDALEAVKEIAD 231 (339)
T ss_pred eEeeehhh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHH-HHHHHhCCcEEEEcCCchhhHHhHhhCc
Confidence 99999988 558999999999999999999999999999999999999886 4559999999999777666666666699
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEecCCC-CC-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-E
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-E 326 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~ 326 (361)
++||+++ ..+++.+++.|+++|+++.+|.+. .. ..++.+.++.++++|.|+..++..+++++++|.++|++++.+ +
T Consensus 232 ~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e 310 (339)
T COG1064 232 AIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILE 310 (339)
T ss_pred EEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEe
Confidence 9999999 778999999999999999999984 44 568888899999999999999999999999999999999999 7
Q ss_pred EEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 327 VIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
.++++++++|++.|++++..||.|+++.
T Consensus 311 ~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 311 TIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred eECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 9999999999999999999999999875
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-64 Score=435.73 Aligned_cols=351 Identities=58% Similarity=0.989 Sum_probs=328.7
Q ss_pred CcccccccceecccCCCCC--ccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCC
Q 018094 6 EQEHPKNAFGWAARDTSGV--LSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~--l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~ 83 (361)
.|..+.++..|.+++..+. ++..++++|++.++||+|+++++|||++|+|.+.|.++...+|.++|||.+|+|++||+
T Consensus 3 ~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs 82 (360)
T KOG0023|consen 3 SMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGS 82 (360)
T ss_pred cccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECC
Confidence 4566788888888877774 45589999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
+|++|++||||-+....-+|++|.+|.++.+++|++.-+++.+...+|....|+|++|+++++.++++||++++.+.||+
T Consensus 83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAP 162 (360)
T KOG0023|consen 83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAP 162 (360)
T ss_pred CcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccc
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCC-CHHHHH
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR-DQDEMQ 242 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~-~~~~~~ 242 (361)
+.|+..|+|.+|.+.. +.||+++-|.|+|++|.+++|+||++|.+|+++++++.+++++++.||++..++.. ++++++
T Consensus 163 lLCaGITvYspLk~~g-~~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~ 241 (360)
T KOG0023|consen 163 LLCAGITVYSPLKRSG-LGPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMK 241 (360)
T ss_pred hhhcceEEeehhHHcC-CCCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHH
Confidence 9999999999998877 68999999999977999999999999999999999998888999999999988876 788888
Q ss_pred HhcCCccEEEEcCC--CcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018094 243 AAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320 (361)
Q Consensus 243 ~~~~g~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~ 320 (361)
++.+-.|.++|++. ..+.+..++.+++++|++|++|.+...+.++.++++.+.++|.|+..++..+.++++++.+++.
T Consensus 242 ~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ 321 (360)
T KOG0023|consen 242 AIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGL 321 (360)
T ss_pred HHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCC
Confidence 87776677777666 6677999999999999999999998889999999999999999999999999999999999999
Q ss_pred CceeeEEEecccHHHHHHHHHcCCCcEEEEEEeCCcc
Q 018094 321 IRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357 (361)
Q Consensus 321 l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~ 357 (361)
++.+++..+++++++|++.|++++.++|.|+++.+++
T Consensus 322 ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~ 358 (360)
T KOG0023|consen 322 IKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL 358 (360)
T ss_pred CcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence 9999999999999999999999999999999998764
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-58 Score=431.68 Aligned_cols=356 Identities=71% Similarity=1.205 Sum_probs=313.8
Q ss_pred CCCCCCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEE
Q 018094 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTE 80 (361)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~ 80 (361)
|+.+|+..++|++++|...+.++.+++.+++.|.++++||+|||.++|||++|++.+.|.++...+|.++|||++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 88899999999999999998888999999999999999999999999999999999887665446789999999999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccc
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA 160 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~ 160 (361)
+|+++++|++||||++.+....|+.|.+|++|.++.|++..+........|...+|+|+||+.+|++.++++|+++++++
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~ 160 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDA 160 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHH
Confidence 99999999999999877777789999999999999999754321111112233479999999999999999999999999
Q ss_pred ccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 161 aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
|+++++.+.|+|+++.....+++|++|||.|+|++|++++|+||.+|++|++++.+++++.++++++|+++++++.+.+.
T Consensus 161 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~ 240 (360)
T PLN02586 161 GAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEK 240 (360)
T ss_pred hhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHH
Confidence 99999999999999987776789999999999999999999999999999998888877777778999999988766556
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~ 320 (361)
+.+.++++|++||++|...++..++++++++|+++.+|.......++...++.++..+.++..++..+++++++++++|+
T Consensus 241 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~ 320 (360)
T PLN02586 241 MKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHN 320 (360)
T ss_pred HHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCC
Confidence 66666689999999998766889999999999999999765556777777788899999998888889999999999999
Q ss_pred CceeeEEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 321 IRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 321 l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
+++.+++|+|+++++||+.+.+++..||+|+++...
T Consensus 321 i~~~~~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 356 (360)
T PLN02586 321 ITADIELIRMDEINTAMERLAKSDVRYRFVIDVANS 356 (360)
T ss_pred CCCcEEEEeHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 998778999999999999999999889999998543
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-57 Score=389.21 Aligned_cols=333 Identities=24% Similarity=0.335 Sum_probs=287.4
Q ss_pred cccccceecccCCCCCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCCCC---CCCCcccccccEEEEEeCCC
Q 018094 9 HPKNAFGWAARDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWGNA---IYPIVPGHEIVGVVTEVGSK 84 (361)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~~~---~~p~~lG~e~~G~V~~vG~~ 84 (361)
..|++.+| ..+++++++++|.|++ .|+||+|++.++|||+||+|++....... +.|.++|||.+|+|+++|+.
T Consensus 3 ~~~~A~vl---~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~ 79 (354)
T KOG0024|consen 3 ADNLALVL---RGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDE 79 (354)
T ss_pred cccceeEE---EccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccc
Confidence 35666666 4678899999999987 99999999999999999999988655433 57999999999999999999
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccccccc
Q 018094 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (361)
Q Consensus 85 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l 164 (361)
|+++|+||||++.|-. +|+.|++|++|.+|.|+...|-..+ ..+|++++|+++++++++++||+++++++|.+
T Consensus 80 Vk~LkVGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ 152 (354)
T KOG0024|consen 80 VKHLKVGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGALI 152 (354)
T ss_pred ccccccCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcccc
Confidence 9999999999988876 9999999999999999998775555 46799999999999999999999999999755
Q ss_pred chhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCH---HH
Q 018094 165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ---DE 240 (361)
Q Consensus 165 ~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~ 240 (361)
- ++..+||+.++ +.+++|++|||+|+|++|+.+...||++|+ +|++++-.+.| .+++|+||++.+.+.... +.
T Consensus 153 e-PLsV~~HAcr~-~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~R-le~Ak~~Ga~~~~~~~~~~~~~~ 229 (354)
T KOG0024|consen 153 E-PLSVGVHACRR-AGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANR-LELAKKFGATVTDPSSHKSSPQE 229 (354)
T ss_pred c-chhhhhhhhhh-cCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHH-HHHHHHhCCeEEeeccccccHHH
Confidence 4 47889999976 458999999999999999999999999999 66666655555 577799999988765442 22
Q ss_pred HHHhc----C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHH
Q 018094 241 MQAAM----G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMID 314 (361)
Q Consensus 241 ~~~~~----~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 314 (361)
+.+.. + .+|+.|||+|...+++.++.+++.+|+++++|......+++......|++.+.|++.+...+|..+++
T Consensus 230 ~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~ 309 (354)
T KOG0024|consen 230 LAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIE 309 (354)
T ss_pred HHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHH
Confidence 22222 2 49999999999999999999999999999999877888999999999999999999999889999999
Q ss_pred HHHcCCCcee--e-EEEecccHHHHHHHHHcCCC-cEEEEEEeC
Q 018094 315 FAAKHNIRAD--I-EVIPADYVNTALERLAKADV-RYRFVIDVA 354 (361)
Q Consensus 315 ~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~-~gkvvi~~~ 354 (361)
++++|+++.. + ++|+++++.+||+.+.+++. .-|+++..+
T Consensus 310 li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 310 LVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred HHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 9999988754 4 89999999999999988775 358888764
|
|
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-55 Score=412.47 Aligned_cols=347 Identities=65% Similarity=1.136 Sum_probs=299.8
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
..++.++...++++.++..+++.|.|+++||+|||.++|||++|++.+.|.+....+|.++|||++|+|+++|+++++|+
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~ 83 (375)
T PLN02178 4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK 83 (375)
T ss_pred cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence 34567777777788898899999999999999999999999999999988664445688999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+....|+.|.+|++|.++.|++..+........|....|+|+||+.+|++.++++|+++++++|+++++...
T Consensus 84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 163 (375)
T PLN02178 84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI 163 (375)
T ss_pred CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence 99999877766679999999999999999864322111111223479999999999999999999999999999999999
Q ss_pred hhhHHHHhhCC-CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCc
Q 018094 170 TVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM 248 (361)
Q Consensus 170 ~a~~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~ 248 (361)
|+|+++..... .++|++|+|.|+|++|++++|+||.+|++|++++++++++.++++++|+++++++.+.+.+.+.++++
T Consensus 164 ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~ 243 (375)
T PLN02178 164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTM 243 (375)
T ss_pred HHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCC
Confidence 99999876543 36899999999999999999999999999999988877766777899999988876655565655689
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEE
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVI 328 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 328 (361)
|++||++|...++..++++++++|+++.+|.......++...++.+++++.|+..++.+++.++++++++|++++.+++|
T Consensus 244 D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~~ 323 (375)
T PLN02178 244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELI 323 (375)
T ss_pred cEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEEE
Confidence 99999999876689999999999999999986655677777888899999999888888999999999999999888889
Q ss_pred ecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 329 PADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 329 ~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
+|+++++||+.+.+++..||+|+++.+.
T Consensus 324 ~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 351 (375)
T PLN02178 324 KMSDINSAMDRLAKSDVRYRFVIDVANS 351 (375)
T ss_pred eHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence 9999999999999999889999999543
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-56 Score=388.16 Aligned_cols=328 Identities=24% Similarity=0.422 Sum_probs=284.5
Q ss_pred CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018094 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 99 (361)
+..+.|+++++++++|++|||+||+.++|+|++|.+.++|.++.. +|.+||||++|+|++||+.|+.+++||+| +..+
T Consensus 10 ~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpGDhV-I~~f 87 (366)
T COG1062 10 EAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPGDHV-ILLF 87 (366)
T ss_pred cCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCCCCEE-EEcc
Confidence 566779999999999999999999999999999999999999876 99999999999999999999999999999 6677
Q ss_pred cCCCCCCcccccCCCCCCccccc-ccccccCCC-------------cccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 100 VGSCRSCDSCAIDLENYCPKVIM-TYANKYHDG-------------TITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 100 ~~~c~~c~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
.+.||.|.+|++|++++|...+. ...+-..+| +..-++|++|..+++.++++++++.+++.++.+.
T Consensus 88 ~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llG 167 (366)
T COG1062 88 TPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLG 167 (366)
T ss_pred cCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEe
Confidence 88999999999999999997622 111111222 2223699999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCH----HH
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ----DE 240 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~ 240 (361)
|...|.+.+..+.+++++|++|.|+|.|.+|++++|-|+..|+ ++|+++.+++|+ +++++||+++++|..+. +.
T Consensus 168 CgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl-~~A~~fGAT~~vn~~~~~~vv~~ 246 (366)
T COG1062 168 CGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKL-ELAKKFGATHFVNPKEVDDVVEA 246 (366)
T ss_pred eeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHH-HHHHhcCCceeecchhhhhHHHH
Confidence 9999999999999999999999999999999999999999999 888888888776 55699999999998764 34
Q ss_pred HHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc--ccChHHHhhCCcEEEecccCC---HHHHHHHHH
Q 018094 241 MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--ELPAFSLLMGRKIVGGSMIGG---MKETQEMID 314 (361)
Q Consensus 241 ~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~ 314 (361)
+.++++ |+|++|||+|+...++.++.++.++|+.+.+|...... .++...+... .++.|++.++ ..++..+++
T Consensus 247 i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~lv~ 325 (366)
T COG1062 247 IVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPRLVD 325 (366)
T ss_pred HHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCccccchhHHHH
Confidence 556677 89999999999999999999999999999999876544 4455555555 8899998764 468999999
Q ss_pred HHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 315 FAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 315 ~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+..+|+|... + ++++|+|+++||+.|.+++.. |-|+.
T Consensus 326 ~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 326 LYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred HHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 9999998764 3 899999999999999999876 44443
|
|
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-54 Score=399.84 Aligned_cols=347 Identities=56% Similarity=0.977 Sum_probs=302.7
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
.++++++....+.+.+++.+++.|.++++||+||+.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCccccc
Confidence 34456666666667899999999999999999999999999999999888665445788999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|++.+....|++|.+|.+|.++.|.+..+.+.+.+..|....|+|+||+.+|...++++|+++++++|+++++.+.
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 166 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV 166 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence 99999877777789999999999999998864332221222334579999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
+||+++......++|++|+|+|+|++|++++|+||.+|++|++++++++++..+.+++|++.++++.+.+.+.+.+.++|
T Consensus 167 ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D 246 (357)
T PLN02514 167 TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLD 246 (357)
T ss_pred HHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCc
Confidence 99999987776789999999999999999999999999999999988888777778899988777666555666667899
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEEe
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIP 329 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 329 (361)
++||++|...++..++++++++|+++.+|.......++...++.+++++.|++..+..++++++++++++++++.+++|+
T Consensus 247 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~i~~~~ 326 (357)
T PLN02514 247 YIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTSMIEVVK 326 (357)
T ss_pred EEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcCcEEEEc
Confidence 99999997666889999999999999999876556777777888999999998888889999999999999987778899
Q ss_pred cccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 330 ADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 330 l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
|+++++||+.+.+++..||++++++++
T Consensus 327 l~~~~~A~~~~~~~~~~gk~v~~~~~~ 353 (357)
T PLN02514 327 MDYVNTAFERLEKNDVRYRFVVDVAGS 353 (357)
T ss_pred HHHHHHHHHHHHcCCCceeEEEEcccc
Confidence 999999999999999889999999765
|
|
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-53 Score=364.11 Aligned_cols=340 Identities=24% Similarity=0.397 Sum_probs=292.7
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
...++.+++| ++...|.++++.+++|+.+||+||++++++|++|.+.+.|..+...+|++||||++|+|+.+|..|+
T Consensus 5 vI~CKAAV~w---~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 5 VITCKAAVAW---EAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred ceEEeEeeec---cCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 3455667776 5667799999999999999999999999999999999999887778999999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCccccccc--ccccCCCcc-------------cCCccceEEEeccCceEE
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--ANKYHDGTI-------------TYGGYSDIMVADEHFVVR 151 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------------~~g~~~~~~~v~~~~v~~ 151 (361)
++++||+| +..+.+.|+.|.+|++++.|.|.+++... ..+..++.. ...+|+||.++++..+++
T Consensus 82 ~vk~GD~V-iplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 82 TVKPGDHV-IPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred ccCCCCEE-eeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 99999999 78889999999999999999999985433 222223222 225999999999999999
Q ss_pred CCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCc
Q 018094 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD 230 (361)
Q Consensus 152 iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~ 230 (361)
|+++.+.+.++.+.|...|.|.+..+.+++++|+++.|+|-|.+|+++++-||+.|| ++|.++-++++.+. +++||++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~-ak~fGaT 239 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEK-AKEFGAT 239 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHH-HHhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999 99999999988654 5999999
Q ss_pred EEecCCC-----HHHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCCCc--ccChHHHhhCCcEEEec
Q 018094 231 SFLVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPL--ELPAFSLLMGRKIVGGS 301 (361)
Q Consensus 231 ~v~~~~~-----~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~g~ 301 (361)
+.+|..+ .+.+.++++ |+|+.|||+|+.++++.++.+...+ |+-+.+|...... .+..+.++ .+.++.|+
T Consensus 240 e~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs 318 (375)
T KOG0022|consen 240 EFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGS 318 (375)
T ss_pred eecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEE
Confidence 9998764 246777776 8999999999999999999999888 9999999876544 44444444 46667776
Q ss_pred ccC---CHHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 302 MIG---GMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 302 ~~~---~~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
..+ +..++..+++...+++++.. + |++||+++++||+.|.+++.. |.|+.+
T Consensus 319 ~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 319 AFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred ecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 553 45788889988888887754 4 999999999999999999976 887764
|
|
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-51 Score=376.27 Aligned_cols=315 Identities=28% Similarity=0.435 Sum_probs=277.0
Q ss_pred CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018094 23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102 (361)
Q Consensus 23 ~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~ 102 (361)
..++++++|.|.|.++||+||++++|+|++|++...|.++...+|.++|||++|+|+++|+++++|++||||++.+....
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 92 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRT 92 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCc
Confidence 46889999999999999999999999999999999887654445789999999999999999999999999998887778
Q ss_pred CCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCC
Q 018094 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182 (361)
Q Consensus 103 c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 182 (361)
|+.|.+|.+|.++.|++..+. |...+|+|+||+.+|+.+++++|+++++++++++++.+.+||+++.. ..++
T Consensus 93 c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~ 164 (329)
T TIGR02822 93 CGVCRYCRRGAENLCPASRYT-------GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLP 164 (329)
T ss_pred CCCChHHhCcCcccCCCcccC-------CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCC
Confidence 999999999999999875432 33457999999999999999999999999999999999999999965 6789
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
+|++|||+|+|++|++++|+|+.+|++|++++++++++ ++++++|++++++..+.. .+++|+++++.+...++.
T Consensus 165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~-~~a~~~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~ 238 (329)
T TIGR02822 165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAAR-RLALALGAASAGGAYDTP-----PEPLDAAILFAPAGGLVP 238 (329)
T ss_pred CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHhCCceeccccccC-----cccceEEEECCCcHHHHH
Confidence 99999999999999999999999999999988887775 667999999988754311 246899999888777799
Q ss_pred HHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEEecccHHHHHHHHH
Q 018094 263 PLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 341 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~~l~~~~~a~~~~~ 341 (361)
.++++++++|+++.+|...+ ...++...++.+++++.++...+..++.+++++++++++++..++|+|+++++||+.+.
T Consensus 239 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~ 318 (329)
T TIGR02822 239 PALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLK 318 (329)
T ss_pred HHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHH
Confidence 99999999999999997533 23566667778999999998777888999999999999986558999999999999999
Q ss_pred cCCCcEEEEE
Q 018094 342 KADVRYRFVI 351 (361)
Q Consensus 342 ~~~~~gkvvi 351 (361)
+++..||+|+
T Consensus 319 ~~~~~Gkvvl 328 (329)
T TIGR02822 319 AGRFDGAAVL 328 (329)
T ss_pred cCCCceEEEe
Confidence 9999999987
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-51 Score=382.24 Aligned_cols=338 Identities=26% Similarity=0.419 Sum_probs=283.1
Q ss_pred cccceecccCC------CCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCC
Q 018094 11 KNAFGWAARDT------SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSK 84 (361)
Q Consensus 11 ~~~~~~~~~~~------~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~ 84 (361)
|+++.+...+. ++.+++.++|.|+|+++||+||+.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 56666665544 47899999999999999999999999999999999988654 356899999999999999999
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccc-ccc--------CCC-----cccCCccceEEEeccCceE
Q 018094 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKY--------HDG-----TITYGGYSDIMVADEHFVV 150 (361)
Q Consensus 85 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-~~~--------~~~-----~~~~g~~~~~~~v~~~~v~ 150 (361)
+++|++||||++.+. ..|+.|.+|.+|.++.|.+...... +.. ..+ ....|+|+||+.+++..++
T Consensus 80 v~~~~~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFV-PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccC-CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 999999999977554 4899999999999999987532211 100 000 1123799999999999999
Q ss_pred ECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC
Q 018094 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA 229 (361)
Q Consensus 151 ~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~ 229 (361)
++|+++++++|+.+.++..+||+++.....+++|++|||.|+|++|++++|+||.+|+ +|++++.+++++ ++++++|+
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~-~~a~~~Ga 237 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKL-ALARELGA 237 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHH-HHHHHcCC
Confidence 9999999999999999999999998777788999999999999999999999999999 688887777665 56689999
Q ss_pred cEEecCCCHHH---HHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEeccc
Q 018094 230 DSFLVSRDQDE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMI 303 (361)
Q Consensus 230 ~~v~~~~~~~~---~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~ 303 (361)
++++++.+++. +.++++ ++|++||++|...++..++++++++|+++.+|.... ...++...++.|++++.|++.
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 317 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM 317 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence 99998776543 444443 799999999987778999999999999999997643 346777778889999999876
Q ss_pred CC---HHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 304 GG---MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 304 ~~---~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
.+ .++++.+++++++|++++. + ++|+|+++++||+.+++++..+|+|+
T Consensus 318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 53 5678999999999999753 3 89999999999999999998888764
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-50 Score=375.56 Aligned_cols=324 Identities=21% Similarity=0.294 Sum_probs=267.9
Q ss_pred CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhh-CCCC--CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018094 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIK-NEWG--NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
.+++.++++++|.| +.++||||||.++|||++|++.+. |.++ ...+|.++|||++|+|+++ ++++|++||||++
T Consensus 11 ~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~ 87 (343)
T PRK09880 11 AGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAI 87 (343)
T ss_pred ecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEE
Confidence 37778999999987 689999999999999999999875 3332 2357899999999999999 6889999999988
Q ss_pred ccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHH
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 176 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~ 176 (361)
.+. ..|++|.+|.+|.++.|++..+..... ......|+|+||+.++++.++++|+++++++++ +..++.+||+++.
T Consensus 88 ~~~-~~cg~c~~c~~g~~~~c~~~~~~g~~~--~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~ 163 (343)
T PRK09880 88 NPS-KPCGHCKYCLSHNENQCTTMRFFGSAM--YFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAH 163 (343)
T ss_pred CCC-CCCcCChhhcCCChhhCCCcceeeccc--ccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHHHHHHHH
Confidence 765 489999999999999999864321110 011246999999999999999999999987655 4456778999997
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHH--HhcCCccEEEE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ--AAMGTMDGIID 253 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~--~~~~g~d~vid 253 (361)
+.. ..+|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|+++++++.+++... +..+++|++||
T Consensus 164 ~~~-~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid 241 (343)
T PRK09880 164 QAG-DLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFE 241 (343)
T ss_pred hcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHHcCCcEEecCCcccHHHHhccCCCCCEEEE
Confidence 765 4689999999999999999999999999 687787777665 566899999999876643211 22236999999
Q ss_pred cCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCce--ee-EEEec
Q 018094 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA--DI-EVIPA 330 (361)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~--~~-~~~~l 330 (361)
++|+..++..++++++++|+++.+|.......++...++.|++++.|+... .+++++++++++++++++ .+ ++|++
T Consensus 242 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~-~~~~~~~~~l~~~g~i~~~~~i~~~~~l 320 (343)
T PRK09880 242 VSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRF-TEEFNTAVSWLANGVINPLPLLSAEYPF 320 (343)
T ss_pred CCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeec-cccHHHHHHHHHcCCCCchhheEEEEEH
Confidence 999876688999999999999999986655677777888899999998754 467999999999999986 33 89999
Q ss_pred ccHHHHHHHHHcCCCcEEEEEEe
Q 018094 331 DYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 331 ~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++||+.+.+++..||+++.+
T Consensus 321 ~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 321 TDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred HHHHHHHHHHhcCCCceEEEEeC
Confidence 99999999999888789999864
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-50 Score=373.35 Aligned_cols=329 Identities=26% Similarity=0.377 Sum_probs=277.9
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++ ..++.+++.++|.|++.++||+||+.++++|++|++.+.+.+.. ..+|.++|||++|+|+++|+++++|+
T Consensus 1 mka~~~---~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVF---PGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEE---ecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 455554 25678999999999999999999999999999999988765432 23578999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+.. .|++|++|++|+++.|.+.... .|....|+|++|+.+|...++++|+++++++|+++++++.
T Consensus 78 ~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~------~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 150 (339)
T cd08239 78 VGDRVMVYHYV-GCGACRNCRRGWMQLCTSKRAA------YGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIG 150 (339)
T ss_pred CCCEEEECCCC-CCCCChhhhCcCcccCcCcccc------cccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 99999776554 8999999999999999875431 1334679999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHH--HHHHhcC
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG 246 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~ 246 (361)
+||+++... .+++|++|||+|+|.+|++++|+|+.+|++ |+++++++++. ++++++|+++++++++.+ .+.++++
T Consensus 151 ta~~~l~~~-~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~ 228 (339)
T cd08239 151 TAYHALRRV-GVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERL-ELAKALGADFVINSGQDDVQEIRELTS 228 (339)
T ss_pred HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEEcCCcchHHHHHHHhC
Confidence 999999754 578999999999999999999999999998 88887777765 555899999998876543 3334443
Q ss_pred --CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccCh-HHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCce
Q 018094 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 323 (361)
Q Consensus 247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~ 323 (361)
++|++||++|+...+..++++++++|+++.+|..... .+.. ..++.+++++.|++..+.++++++++++.++++++
T Consensus 229 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~ 307 (339)
T cd08239 229 GAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEV 307 (339)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCCh
Confidence 7999999999987668899999999999999975542 3332 45678999999998888889999999999999875
Q ss_pred --ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 324 --DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 324 --~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.+ ++|+++++++||+.++++. .||+|+++
T Consensus 308 ~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 308 DRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred hHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 34 8999999999999998876 69999864
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-50 Score=375.38 Aligned_cols=342 Identities=22% Similarity=0.346 Sum_probs=276.1
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
+|....+.++.+.++++.+++.++|.|.++++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++|++++
T Consensus 7 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~ 83 (378)
T PLN02827 7 QPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVT 83 (378)
T ss_pred CcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCc
Confidence 4443334444445555678889999999999999999999999999999887642 4678999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccC---------CC-----cccCCccceEEEeccCceEEC
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH---------DG-----TITYGGYSDIMVADEHFVVRI 152 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~---------~~-----~~~~g~~~~~~~v~~~~v~~i 152 (361)
+|++||||++.+. ..|++|.+|.+|.+++|.+......+... .| ....|+|+||+.+|+..++++
T Consensus 84 ~~~~GdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~i 162 (378)
T PLN02827 84 EFEKGDHVLTVFT-GECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
T ss_pred ccCCCCEEEEecC-CCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEEC
Confidence 9999999987654 48999999999999999875321111000 01 012489999999999999999
Q ss_pred CCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcE
Q 018094 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADS 231 (361)
Q Consensus 153 P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~ 231 (361)
|+++++++++++.+++.++|+++.....+++|++|||+|+|++|++++|+|+.+|++ |++++.++++. ++++++|+++
T Consensus 163 P~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~-~~a~~lGa~~ 241 (378)
T PLN02827 163 DPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKA-EKAKTFGVTD 241 (378)
T ss_pred CCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCcE
Confidence 999999999999888889998877777789999999999999999999999999995 66655566554 5668999998
Q ss_pred EecCCC--HH---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCCCcccCh-HHHhhCCcEEEeccc
Q 018094 232 FLVSRD--QD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMI 303 (361)
Q Consensus 232 v~~~~~--~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~ 303 (361)
++++.+ ++ .+.++++ ++|++||++|....+..+++.++++ |+++.+|.......+.. ..++.+++++.|+..
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 888754 22 3444444 7999999999876689999999998 99999998654444433 346779999999865
Q ss_pred CC---HHHHHHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 304 GG---MKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 304 ~~---~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
.. ..+++.++++++++++++ .+ ++|+|+++++|++.+++++. +|+||++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 43 457889999999999987 45 89999999999999998876 79999874
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-50 Score=375.98 Aligned_cols=339 Identities=24% Similarity=0.338 Sum_probs=275.6
Q ss_pred cccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 018094 9 HPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
.+|+++.+ .++.+.+++.++|.|.|.++||+||++++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 9 ~~mka~~~--~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 86 (381)
T PLN02740 9 ITCKAAVA--WGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED 86 (381)
T ss_pred eeeEEEEE--ecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence 34555554 433445788899999999999999999999999999999886532 357899999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccc-------cccCC----------CcccCCccceEEEeccCceE
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-------NKYHD----------GTITYGGYSDIMVADEHFVV 150 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-------~~~~~----------~~~~~g~~~~~~~v~~~~v~ 150 (361)
|++||||++.+. ..|++|.+|.++.++.|++...... +.... .....|+|+||+.+|...++
T Consensus 87 ~~vGdrV~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 87 LKAGDHVIPIFN-GECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred CCCCCEEEecCC-CCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 999999977664 5899999999999999998642110 00000 01136999999999999999
Q ss_pred ECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC
Q 018094 151 RIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA 229 (361)
Q Consensus 151 ~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~ 229 (361)
++|+++++++++.+++++.+||+++.....+++|++|||+|+|++|++++|+||.+|+ +|+++++++++. ++++++|+
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~-~~a~~~Ga 244 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKF-EKGKEMGI 244 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHH-HHHHHcCC
Confidence 9999999999999999999999988777788999999999999999999999999999 688888877765 55589999
Q ss_pred cEEecCCCH-----HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCCC--cccChHHHhhCCcEEEe
Q 018094 230 DSFLVSRDQ-----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGRKIVGG 300 (361)
Q Consensus 230 ~~v~~~~~~-----~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g 300 (361)
+++++..+. +.+.++++ ++|++||++|+..++..++.+++++ |+++.+|..... ..++...+ .+++++.|
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g 323 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITG 323 (381)
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEE
Confidence 988886542 23444444 7999999999877789999999996 999999986543 23333333 47889988
Q ss_pred cccCC---HHHHHHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 301 SMIGG---MKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 301 ~~~~~---~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+..++ ..+++++++++.++++++ .+ ++|+|+++++|++.+.+++. .|++|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 86544 457899999999998875 34 89999999999999988875 6999874
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-50 Score=366.28 Aligned_cols=309 Identities=29% Similarity=0.417 Sum_probs=267.1
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCC-CCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE-WGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+.|..++++++|.|.|+++||||||+++++|+.|+....|. .+..++|.++|.|++|+|+++|++++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 56667777677777999999999999999999999999999999999986 33446899999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||+.... ....|+|+||..+|++.++++|+++++++||++++.++
T Consensus 81 ~GdrV~~~~~--------------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~ 128 (326)
T COG0604 81 VGDRVAALGG--------------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL 128 (326)
T ss_pred CCCEEEEccC--------------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence 9999975210 00579999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
|||+++....++++|++|||+|+ |++|.+++|+||++|++++++++++++.. +++++|+++++++.+++ .+++++
T Consensus 129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVINYREEDFVEQVRELT 207 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEEcCCcccHHHHHHHHc
Confidence 99999999898999999999986 99999999999999998888888888776 77999999999987754 455566
Q ss_pred C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccCCH------HHHHHHHHH
Q 018094 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGM------KETQEMIDF 315 (361)
Q Consensus 246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~ 315 (361)
+ ++|+|||++|+.. +..++++|+++|+++.+|..++ ...++...++.+.+++.|...... +.+++++++
T Consensus 208 ~g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 286 (326)
T COG0604 208 GGKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDL 286 (326)
T ss_pred CCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHH
Confidence 5 6999999999986 8889999999999999998763 345677778889999988876544 557779999
Q ss_pred HHcCCCceee-EEEecccHHHHHHHHHc-CCCcEEEEEEe
Q 018094 316 AAKHNIRADI-EVIPADYVNTALERLAK-ADVRYRFVIDV 353 (361)
Q Consensus 316 l~~~~l~~~~-~~~~l~~~~~a~~~~~~-~~~~gkvvi~~ 353 (361)
+.+|++++.+ ++|++++..++...... ++..||+|+++
T Consensus 287 ~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 287 LASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 9999999998 79999996555554444 47889999974
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-49 Score=369.77 Aligned_cols=337 Identities=24% Similarity=0.369 Sum_probs=277.7
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+|+++.+...+ +.++++++|.|+|+++||+|||.++++|++|++...|..+ ..+|.++|||++|+|+++|+++++|+
T Consensus 1 ~mka~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 1 TVRGVIARSKG--APVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred CcEEEEEccCC--CCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccC
Confidence 46666665543 3478899999999999999999999999999999888654 35788999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccc-cCCCc-----ccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK-YHDGT-----ITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
+||||++.+. ..|+.|.+|.+|.+++|.......... ...|. ...|+|+||+.+|+.+++++|+++++++|+.
T Consensus 78 ~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~ 156 (358)
T TIGR03451 78 PGDYVVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL 156 (358)
T ss_pred CCCEEEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence 9999987765 489999999999999998642110000 00010 1369999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHH---
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD--- 239 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~--- 239 (361)
+++.+.++|+++.....+++|++|||+|+|++|++++|+||.+|++ |++++++++++ ++++++|+++++++.+++
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~-~~~~~~Ga~~~i~~~~~~~~~ 235 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKL-EWAREFGATHTVNSSGTDPVE 235 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCceEEcCCCcCHHH
Confidence 9999999998887777889999999999999999999999999995 87777776665 556899999988876543
Q ss_pred HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC--cccChHHHhhCCcEEEecccC---CHHHHHHH
Q 018094 240 EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIG---GMKETQEM 312 (361)
Q Consensus 240 ~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~ 312 (361)
.+.+.++ ++|++||++|+..++..++++++++|+++.+|..... ..++...++.+++++.+++.. ..++++++
T Consensus 236 ~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 315 (358)
T TIGR03451 236 AIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPML 315 (358)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHH
Confidence 3444444 6999999999876789999999999999999986543 456666778899999988643 45778999
Q ss_pred HHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 313 IDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 313 ~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++++++|++++. + ++|+++++++||+.+++++.. |+++.
T Consensus 316 ~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 316 VDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 999999999763 4 899999999999999988765 77764
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-49 Score=368.70 Aligned_cols=331 Identities=23% Similarity=0.379 Sum_probs=269.3
Q ss_pred cCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 19 RDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 19 ~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
...++.++++++|.|+|.++||+|||.++|+|++|++...|.++...+|.++|||++|+|+++|+++++|++||||++.+
T Consensus 8 ~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~ 87 (368)
T TIGR02818 8 WAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLY 87 (368)
T ss_pred ecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcC
Confidence 34556688899999999999999999999999999999988765556789999999999999999999999999997755
Q ss_pred ccCCCCCCcccccCCCCCCcccccccc-ccc--------CCC-----cccCCccceEEEeccCceEECCCCCCccccccc
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVIMTYA-NKY--------HDG-----TITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~~~~~-~~~--------~~~-----~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l 164 (361)
. ..|++|.+|..|.++.|.+...... +.. ..| ....|+|+||+.+|+..++++|+++++++++++
T Consensus 88 ~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l 166 (368)
T TIGR02818 88 T-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLL 166 (368)
T ss_pred C-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhh
Confidence 4 5899999999999999987532100 000 001 112479999999999999999999999999999
Q ss_pred chhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCC--H---
Q 018094 165 LCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD--Q--- 238 (361)
Q Consensus 165 ~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~--- 238 (361)
++++.+||+++.....+++|++|||+|+|++|++++|+||.+|+ +|++++.+++++ ++++++|++++++..+ .
T Consensus 167 ~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~-~~a~~~Ga~~~i~~~~~~~~~~ 245 (368)
T TIGR02818 167 GCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKF-ELAKKLGATDCVNPNDYDKPIQ 245 (368)
T ss_pred cchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHhCCCeEEcccccchhHH
Confidence 99999999998777788999999999999999999999999999 788888877765 5558999999888653 2
Q ss_pred HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC--CcccChHHHhhCCcEEEecccC---CHHHHHH
Q 018094 239 DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG---GMKETQE 311 (361)
Q Consensus 239 ~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~ 311 (361)
+.+.++++ ++|++||++|+..++..++++++++ |+++.+|.... ...+....++. +..+.++... ...++.+
T Consensus 246 ~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~ 324 (368)
T TIGR02818 246 EVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKGRTELPG 324 (368)
T ss_pred HHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCcHHHHHH
Confidence 23445544 7999999999877788999999886 99999997542 23344444443 3456776543 3467899
Q ss_pred HHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 312 MIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 312 ~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++.++++++. + ++|+|+++++||+.+++++. .|+++++
T Consensus 325 ~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 325 IVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred HHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 9999999988643 4 89999999999999988764 7999874
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-49 Score=362.89 Aligned_cols=327 Identities=28% Similarity=0.378 Sum_probs=262.9
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCC-cccccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPI-VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~-~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 99 (361)
+.+..++++.+.|.+.|++|+|||.++|||+||++.+++..+....|. ++|||++|+|+++| .++.+++||||++.+.
T Consensus 9 ~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~ 87 (350)
T COG1063 9 GGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPN 87 (350)
T ss_pred cCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCC
Confidence 333444666766778999999999999999999999999776666666 99999999999999 7788999999988765
Q ss_pred cCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc-eEECCCCCCcccccccchhhhhhhHHHHhh
Q 018094 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-VVRIPEGTPLDATAPLLCAGITVYSPLRFY 178 (361)
Q Consensus 100 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~ 178 (361)
. +|+.|++|+.|.+++|++.++..... .+...+|+|+||+.+|.++ +.++|+++ ..+++++..++.++|++....
T Consensus 88 ~-~Cg~C~~C~~G~~~~C~~~~~~g~~~--~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~ 163 (350)
T COG1063 88 I-PCGHCRYCRAGEYNLCENPGFYGYAG--LGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAER 163 (350)
T ss_pred c-CCCCChhHhCcCcccCCCcccccccc--ccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhc
Confidence 4 99999999999999999654221111 1112689999999999655 55558998 677788888899997774444
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHH-cCCcEEecCCCH---HHHHHhcC--CccEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIER-LGADSFLVSRDQ---DEMQAAMG--TMDGI 251 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~-~g~~~v~~~~~~---~~~~~~~~--g~d~v 251 (361)
...+++++|+|+|+|++|++++++++.+|+ +|++++.+++|+ +++++ +|++.+++...+ ..+.+.++ ++|++
T Consensus 164 ~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl-~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~v 242 (350)
T COG1063 164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL-ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVV 242 (350)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEE
Confidence 445677799999999999999999999998 666666666655 56677 666766665442 23445554 59999
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEeccc-CCHHHHHHHHHHHHcCCCcee---eE
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMI-GGMKETQEMIDFAAKHNIRAD---IE 326 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~-~~~~~~~~~~~~l~~~~l~~~---~~ 326 (361)
|||+|...++..++++++++|+++.+|...... .++...+..|++++.|+.. ....+++.+++++++|++++. .+
T Consensus 243 ie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~ 322 (350)
T COG1063 243 IEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITH 322 (350)
T ss_pred EECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEe
Confidence 999999888999999999999999999987665 6778888999999999955 566789999999999999876 38
Q ss_pred EEecccHHHHHHHHHcCCC-cEEEEEEe
Q 018094 327 VIPADYVNTALERLAKADV-RYRFVIDV 353 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 353 (361)
+++++++++|++.+.+... ..|+++++
T Consensus 323 ~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 323 RLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred eccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9999999999999987554 56988863
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=367.00 Aligned_cols=338 Identities=21% Similarity=0.260 Sum_probs=262.8
Q ss_pred ccccceecccCCCCCccceeeeccCCC-------CCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATG-------EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVG 82 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~-------~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG 82 (361)
-|+++++ ..++.++++++|.|+|+ ++||||||+++|||++|++.+.|.++ ..+|.++|||++|+|+++|
T Consensus 2 ~mka~v~---~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 2 GNRGVVY---LGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKG 77 (393)
T ss_pred CceEEEE---ecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEc
Confidence 3666655 35667888999999874 68999999999999999999988653 3568999999999999999
Q ss_pred CCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccc----cccccCCCcccCCccceEEEeccC--ceEECCCCC
Q 018094 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT----YANKYHDGTITYGGYSDIMVADEH--FVVRIPEGT 156 (361)
Q Consensus 83 ~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~ 156 (361)
+++++|++||||++.+.. .|++|++|++|.++.|.+.... +.+....+ ...|+|+||+.+|.. .++++|+++
T Consensus 78 ~~V~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-~~~G~~aey~~v~~~~~~l~~vP~~~ 155 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNI-ACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-GWVGGQSEYVMVPYADFNLLKFPDRD 155 (393)
T ss_pred CccccccCCCEEEEeccc-CCCCChHHHCcCcccCcCCCCCCccceecccccC-CCCCceEEEEEechhhCceEECCCcc
Confidence 999999999999887665 7999999999999999974311 11110101 246999999999964 799999987
Q ss_pred Cc----ccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE
Q 018094 157 PL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232 (361)
Q Consensus 157 ~~----~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v 232 (361)
+. .+++++.+++.++|+++.. ..+++|++|||.|+|++|++++|+|+.+|++++++++..+.+.++++++|++.+
T Consensus 156 ~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v 234 (393)
T TIGR02819 156 QALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETV 234 (393)
T ss_pred cccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEE
Confidence 54 3467788889999998875 568999999998889999999999999999866665544555677799999754
Q ss_pred ecCCCH---HHHHHhcC--CccEEEEcCCCc--------------ccHHHHHHhhccCCEEEEecCCC-CC---------
Q 018094 233 LVSRDQ---DEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVLVGAPE-KP--------- 283 (361)
Q Consensus 233 ~~~~~~---~~~~~~~~--g~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~--------- 283 (361)
+...+. +.+.++++ ++|++||++|.+ .+++.++++++++|+++.+|... +.
T Consensus 235 ~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~ 314 (393)
T TIGR02819 235 DLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAK 314 (393)
T ss_pred ecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccc
Confidence 333322 34555554 699999999986 36999999999999999999853 11
Q ss_pred ---cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee---e-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 284 ---LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD---I-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 284 ---~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~---~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
.++....++.+++++.+......+.+.++++++.+|++++. . ++|+|+++++||+.+.++. .+|++++++.
T Consensus 315 ~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~~~ 392 (393)
T TIGR02819 315 TGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDPHG 392 (393)
T ss_pred ccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC-ceEEEEeCCC
Confidence 12333445567778877543332334789999999998752 3 6899999999999998875 4999998753
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-48 Score=364.62 Aligned_cols=337 Identities=22% Similarity=0.385 Sum_probs=275.2
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+|+++.+. +.++.++++++|.|+|+++||+||+.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~ka~~~~--~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 2 TCKAAVAW--EAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred ccEEEEEe--cCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccc
Confidence 34555543 3445688999999999999999999999999999999988766567789999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCccccccc-ccccC--------------CCcccCCccceEEEeccCceEECCC
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKYH--------------DGTITYGGYSDIMVADEHFVVRIPE 154 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~g~~~~~~~v~~~~v~~iP~ 154 (361)
+||||++.+ ...|++|.+|.+|.+++|.+..... .+... ......|+|+||+.+++..++++|+
T Consensus 80 ~GdrV~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 80 PGDHVLPVF-TGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred cCCEEEEcc-CCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 999997654 5589999999999999999863211 11100 0011358999999999999999999
Q ss_pred CCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEe
Q 018094 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL 233 (361)
Q Consensus 155 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~ 233 (361)
++++++++.+++++.++|+++.....+++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.. +++++|++.++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~-~~~~~Ga~~~i 237 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE-QAKKFGVTEFV 237 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHcCCceEE
Confidence 999999999999999999988877888999999999999999999999999999 7988888877754 55899998888
Q ss_pred cCCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCCC--cccChHHHhhCCcEEEecccC
Q 018094 234 VSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIG 304 (361)
Q Consensus 234 ~~~~--~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~ 304 (361)
++.+ + +.+.++++ ++|++||++|....+..++++++++ |+++.+|..... ..++...++ +++++.|+...
T Consensus 238 ~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 316 (369)
T cd08301 238 NPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFG 316 (369)
T ss_pred cccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecC
Confidence 7654 2 23444444 7999999999877688999999996 999999986543 344444443 68999987654
Q ss_pred C---HHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 305 G---MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 305 ~---~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+ ..+++.+++++.+++++.. + ++|+|+++++||+.+++++. .|+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~~ 369 (369)
T cd08301 317 GYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCILH 369 (369)
T ss_pred CCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEeC
Confidence 3 3578899999999987653 4 89999999999999998886 588873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-48 Score=361.47 Aligned_cols=319 Identities=25% Similarity=0.365 Sum_probs=272.4
Q ss_pred CccceeeeccCCCCCeEEEEEeeeccccchhhhhhCC-CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018094 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE-WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102 (361)
Q Consensus 24 ~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~ 102 (361)
.++++++|.|.+.++||+||+.++++|++|++...+. .+...+|.++|||++|+|+++|++++.+ +||||++.+.. .
T Consensus 10 ~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~-~ 87 (349)
T TIGR03201 10 PMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVI-P 87 (349)
T ss_pred CceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCC-C
Confidence 3788899999999999999999999999999886443 2233568899999999999999999887 99999877665 9
Q ss_pred CCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCC------CCCcccccccchhhhhhhHHHH
Q 018094 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE------GTPLDATAPLLCAGITVYSPLR 176 (361)
Q Consensus 103 c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~------~~~~~~aa~l~~~~~~a~~~l~ 176 (361)
|++|.+|++|.++.|....+. |....|+|+||+.+|++.++++|+ ++++++++++++++.++|+++.
T Consensus 88 cg~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~ 160 (349)
T TIGR03201 88 CGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV 160 (349)
T ss_pred CCCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH
Confidence 999999999999999764321 233569999999999999999999 8999999999999999999987
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH---H---HHHHhcC--Cc
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ---D---EMQAAMG--TM 248 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~---~---~~~~~~~--g~ 248 (361)
. ..+++|++|+|+|+|++|++++|+|+.+|++|++++++++++. +++++|+++++++.+. + .+.++++ |+
T Consensus 161 ~-~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~ 238 (349)
T TIGR03201 161 Q-AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLE-MMKGFGADLTLNPKDKSAREVKKLIKAFAKARGL 238 (349)
T ss_pred h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHhCCceEecCccccHHHHHHHHHhhcccCCC
Confidence 5 5689999999999999999999999999999999888887765 5589999988886542 2 2334443 56
Q ss_pred c----EEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018094 249 D----GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 249 d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
| ++|||+|+..++..++++++++|+++.+|.......++...++.+++++.|++..+..++++++++++++++++.
T Consensus 239 d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~ 318 (349)
T TIGR03201 239 RSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLG 318 (349)
T ss_pred CCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcc
Confidence 5 899999998778889999999999999998765566677777788899999887778889999999999998753
Q ss_pred --eEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 325 --IEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 325 --~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++|+|+++++||+.+++++..||+++++
T Consensus 319 ~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 319 PFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred cceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 47899999999999999999889999853
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-48 Score=361.37 Aligned_cols=333 Identities=25% Similarity=0.415 Sum_probs=272.2
Q ss_pred eecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEE
Q 018094 15 GWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94 (361)
Q Consensus 15 ~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V 94 (361)
++.+.+.++.++++++|.|.+.++||+||++++++|++|++...|.++ ..+|.++|||++|+|+++|++++++++||||
T Consensus 5 a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV 83 (365)
T cd08277 5 AAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPGDKV 83 (365)
T ss_pred EEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCCCEE
Confidence 333344445688999999999999999999999999999999988654 4578899999999999999999999999999
Q ss_pred EEccccCCCCCCcccccCCCCCCcccccccccccCCC-------------cccCCccceEEEeccCceEECCCCCCcccc
Q 018094 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDG-------------TITYGGYSDIMVADEHFVVRIPEGTPLDAT 161 (361)
Q Consensus 95 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~g~~~~~~~v~~~~v~~iP~~~~~~~a 161 (361)
++. ....|++|.+|.+|.+++|++......+....+ ....|+|+||+.+++..++++|++++++++
T Consensus 84 ~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~a 162 (365)
T cd08277 84 IPL-FIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHV 162 (365)
T ss_pred EEC-CCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHh
Confidence 764 445999999999999999998643322221111 112589999999999999999999999999
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCC---
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD--- 237 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--- 237 (361)
+.+.+++.+||+++.....+++|++|||+|+|.+|++++|+|+.+|+ +|+++++.++++ ++++++|++++++..+
T Consensus 163 a~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~-~~~~~~ga~~~i~~~~~~~ 241 (365)
T cd08277 163 CLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKF-EKAKEFGATDFINPKDSDK 241 (365)
T ss_pred hHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHcCCCcEeccccccc
Confidence 99999999999998777788999999999999999999999999999 688888877765 4558999998887654
Q ss_pred --HHHHHHhc-CCccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC-CcccChHHHhhCCcEEEecccCC---HHHH
Q 018094 238 --QDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG---MKET 309 (361)
Q Consensus 238 --~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~ 309 (361)
.+.+.+++ +++|++||++|+...+..++++++++ |+++.+|...+ ...++...++. ++++.|++.+. ..++
T Consensus 242 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~ 320 (365)
T cd08277 242 PVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKSRSDV 320 (365)
T ss_pred hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCChHHHH
Confidence 23344444 37999999999877688999999885 99999997653 34555555553 78888876653 4578
Q ss_pred HHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 310 QEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 310 ~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+.+++++++++++. .+ ++|+++++++||+.+++++ ..|+++.
T Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 321 PKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred HHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEeeC
Confidence 99999999997664 34 8999999999999998887 4688863
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-48 Score=361.97 Aligned_cols=329 Identities=23% Similarity=0.380 Sum_probs=268.4
Q ss_pred CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018094 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 99 (361)
..++.+++.++|.|.|.++||+||++++|+|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||||++. .
T Consensus 10 ~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~-~ 88 (368)
T cd08300 10 EAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPL-Y 88 (368)
T ss_pred cCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCCCEEEEc-C
Confidence 445668889999999999999999999999999999998876655789999999999999999999999999999765 4
Q ss_pred cCCCCCCcccccCCCCCCcccccc-cccccCC-------------CcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 100 VGSCRSCDSCAIDLENYCPKVIMT-YANKYHD-------------GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 100 ~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
...|++|.+|.++.++.|++.... +.+.... .....|+|+||+.+++..++++|+++++++|+.++
T Consensus 89 ~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~ 168 (368)
T cd08300 89 TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLG 168 (368)
T ss_pred CCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhc
Confidence 469999999999999999875321 1010000 01124799999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCH-----H
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ-----D 239 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~-----~ 239 (361)
+++.+||+++.....+++|++|||+|+|++|++++|+||.+|+ +|++++++++++. +++++|+++++++.+. +
T Consensus 169 ~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~-~~~~lGa~~~i~~~~~~~~~~~ 247 (368)
T cd08300 169 CGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFE-LAKKFGATDCVNPKDHDKPIQQ 247 (368)
T ss_pred cchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH-HHHHcCCCEEEcccccchHHHH
Confidence 9999999998777778999999999999999999999999999 6888888887764 5589999999887642 2
Q ss_pred HHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC--CcccChHHHhhCCcEEEeccc---CCHHHHHHH
Q 018094 240 EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMI---GGMKETQEM 312 (361)
Q Consensus 240 ~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~ 312 (361)
.+.++++ ++|+|||++|+...+..++++++++ |+++.+|.... ...+....+. ++..+.++.. ...++++++
T Consensus 248 ~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~ 326 (368)
T cd08300 248 VLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKL 326 (368)
T ss_pred HHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHH
Confidence 3444444 7999999999876688999999886 99999997642 2333443333 3345555543 245778999
Q ss_pred HHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 313 IDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 313 ~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++++.++++++. + ++|+|+++++||+.+.+++. .|++++
T Consensus 327 ~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 327 VEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred HHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 999999998863 4 89999999999999988765 688874
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-48 Score=361.34 Aligned_cols=330 Identities=22% Similarity=0.319 Sum_probs=258.1
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+.. +.+. +++.++|.|+|+++||||||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|++ ++
T Consensus 1 mka~~~~~-~~~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKP-GKPG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecC-CCCC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 45555543 2233 889999999999999999999999999999999886532 245789999999999999999 99
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
|++||||++.+ ...|++|.+|.+|.+++|.+..+...+ .....|+|+||+.+|+..++++|++++ ++ +++..+
T Consensus 78 ~~vGdrV~~~~-~~~cg~C~~c~~g~~~~c~~~~~~~~g----~~~~~G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p 150 (355)
T cd08230 78 LSPGDLVVPTV-RRPPGKCLNCRIGRPDFCETGEYTERG----IKGLHGFMREYFVDDPEYLVKVPPSLA-DV-GVLLEP 150 (355)
T ss_pred CCCCCEEEecc-ccCCCcChhhhCcCcccCCCcceeccC----cCCCCccceeEEEeccccEEECCCCCC-cc-eeecch
Confidence 99999997655 458999999999999999875432111 012469999999999999999999998 43 444444
Q ss_pred hhhhhHHHHh------hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC--chhHHHHHHHcCCcEEecCCCHH
Q 018094 168 GITVYSPLRF------YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 168 ~~~a~~~l~~------~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~--~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
..+++.++.. ...+++|++|||+|+|++|++++|+||++|++|++++++ .+++.++++++|++.+ ++.+++
T Consensus 151 ~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~~~ 229 (355)
T cd08230 151 LSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV-NSSKTP 229 (355)
T ss_pred HHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe-cCCccc
Confidence 4444443322 122468999999999999999999999999999998873 2344567789999874 544332
Q ss_pred HH-HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccC----hHHHhhCCcEEEecccCCHHHHHHH
Q 018094 240 EM-QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELP----AFSLLMGRKIVGGSMIGGMKETQEM 312 (361)
Q Consensus 240 ~~-~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~g~~~~~~~~~~~~ 312 (361)
.. .+..+++|+|||++|+...+..++++++++|+++.+|...+ ...++ ...++.|++++.|+...+.++++.+
T Consensus 230 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~ 309 (355)
T cd08230 230 VAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQA 309 (355)
T ss_pred hhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHH
Confidence 21 12235899999999987668999999999999999998665 34455 3457789999999988777889999
Q ss_pred HHHHHcCC------Cceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 313 IDFAAKHN------IRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 313 ~~~l~~~~------l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++++.++. +++.+ ++|+++++++||+.+.++. +|+|+++
T Consensus 310 ~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 310 VEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 99999876 44444 8999999999999887554 6999864
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-46 Score=349.70 Aligned_cols=328 Identities=23% Similarity=0.339 Sum_probs=265.4
Q ss_pred cccceecccCCCCCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+. .++.+++.++|.|.+ .++||+|||.++++|++|++.+.+.. ...+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~---~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVND---TDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEe---CCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCC
Confidence 4455543 345688889999997 59999999999999999987543211 123578999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+.. .|+.|.+|..|.++.|.+..+. +....|+|++|+.+|++.++++|+++++++|+.+. ...
T Consensus 77 vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~ 147 (347)
T PRK10309 77 PGDAVACVPLL-PCFTCPECLRGFYSLCAKYDFI-------GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PIT 147 (347)
T ss_pred CCCEEEECCCc-CCCCCcchhCcCcccCCCccee-------ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHH
Confidence 99999887665 7999999999999999864321 23457999999999999999999999999988763 345
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCH--HHHHHhcC
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG 246 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~ 246 (361)
++|+++. ...+++|++|||+|+|++|++++|+|+.+|++ |++++++++++. +++++|+++++++++. +.+.+.+.
T Consensus 148 ~~~~~~~-~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~-~~~~~Ga~~~i~~~~~~~~~~~~~~~ 225 (347)
T PRK10309 148 VGLHAFH-LAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLA-LAKSLGAMQTFNSREMSAPQIQSVLR 225 (347)
T ss_pred HHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH-HHHHcCCceEecCcccCHHHHHHHhc
Confidence 5777764 45678999999999999999999999999996 677777776654 5689999988886542 33444443
Q ss_pred --Ccc-EEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccCh---HHHhhCCcEEEecccCC-----HHHHHHHHHH
Q 018094 247 --TMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA---FSLLMGRKIVGGSMIGG-----MKETQEMIDF 315 (361)
Q Consensus 247 --g~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~i~g~~~~~-----~~~~~~~~~~ 315 (361)
++| ++|||+|+..++..++++++++|+++.+|.......++. ..++.+++++.|++.+. .+++++++++
T Consensus 226 ~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 305 (347)
T PRK10309 226 ELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRL 305 (347)
T ss_pred CCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHH
Confidence 688 999999987778999999999999999998665433332 35677999999986532 4678999999
Q ss_pred HHcCCCc--eee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 316 AAKHNIR--ADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 316 l~~~~l~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++|+++ +.+ ++|+|+++++|++.+.+++..||+|+++
T Consensus 306 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 306 LTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 9999885 334 8999999999999999998889999975
|
|
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-46 Score=345.90 Aligned_cols=331 Identities=35% Similarity=0.623 Sum_probs=285.2
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.+ .++++.++++++|.|++.+++|+||+.++++|++|++...|..+...+|.++|||++|+|+++|++++++++
T Consensus 1 m~a~~~--~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQV--TEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEE--ccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCC
Confidence 344444 333357889999999999999999999999999999988886644456889999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|++.+....|++|.+|..|.++.|....+. +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 151 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVT 151 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHH
Confidence 999998888889999999999999999875421 3334689999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc--CCc
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTM 248 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~g~ 248 (361)
||+++... .+.++++|||+|+|.+|++++++|+.+|++|+++++++++.. .++++|+++++++...+...++. .++
T Consensus 152 a~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~~~~~~~~ 229 (333)
T cd08296 152 TFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKAD-LARKLGAHHYIDTSKEDVAEALQELGGA 229 (333)
T ss_pred HHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHcCCcEEecCCCccHHHHHHhcCCC
Confidence 99998766 789999999999999999999999999999999988877754 45899999988876544322221 479
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEE
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVI 328 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 328 (361)
|++||+.|....+..++++++++|+++.+|.......++...++.+++++.++......++..+++++.++++++.++.|
T Consensus 230 d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~ 309 (333)
T cd08296 230 KLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETF 309 (333)
T ss_pred CEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEEEE
Confidence 99999987666688999999999999999987655667777777899999999887888899999999999888767889
Q ss_pred ecccHHHHHHHHHcCCCcEEEEEE
Q 018094 329 PADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 329 ~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+++++.+||+.+++++.+||+|++
T Consensus 310 ~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 310 PLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred EHHHHHHHHHHHHCCCCceeEEeC
Confidence 999999999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-47 Score=316.45 Aligned_cols=313 Identities=23% Similarity=0.292 Sum_probs=269.5
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
.|...+.+.+...++++.+++++.|+|+|+|+|++||-.++|+|..|..+.+|-|.....|++||.|++|+|++||+.++
T Consensus 5 ~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvt 84 (336)
T KOG1197|consen 5 SPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVT 84 (336)
T ss_pred CCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcc
Confidence 34455666666668889999999999999999999999999999999999999997778999999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccch
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~ 166 (361)
++++||||+.. .+.|.|+|+..+|...++++|+++++.+||++..
T Consensus 85 drkvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~ll 129 (336)
T KOG1197|consen 85 DRKVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLL 129 (336)
T ss_pred ccccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHH
Confidence 99999999641 4789999999999999999999999999999999
Q ss_pred hhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHh-
Q 018094 167 AGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA- 244 (361)
Q Consensus 167 ~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~- 244 (361)
-++|||.-+++...+++|++||++.+ |++|++++|++|+.|+++|.+++..+++ +++++.|+++.|+++.+|.+++.
T Consensus 130 q~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~-~~akenG~~h~I~y~~eD~v~~V~ 208 (336)
T KOG1197|consen 130 QGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKH-EIAKENGAEHPIDYSTEDYVDEVK 208 (336)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHH-HHHHhcCCcceeeccchhHHHHHH
Confidence 99999999999999999999999976 9999999999999999999999999886 56699999999999998766554
Q ss_pred --cC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEec-cc---CCHHH----HHH
Q 018094 245 --MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGS-MI---GGMKE----TQE 311 (361)
Q Consensus 245 --~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~-~~---~~~~~----~~~ 311 (361)
++ |+|+++|.+|... +..++.+|++.|.+|.+|..++. ..++...+.-+++++..- .. ..+.. ..+
T Consensus 209 kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~r 287 (336)
T KOG1197|consen 209 KITNGKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVAR 287 (336)
T ss_pred hccCCCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHH
Confidence 43 8999999999975 99999999999999999986653 234444444455444321 11 12222 345
Q ss_pred HHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 312 MIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 312 ~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
++.++.++.+++.+ ++|||+++.+|+.++++..+.||+++....+
T Consensus 288 l~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 288 LFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred HHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 66777889999999 9999999999999999999999999988765
|
|
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-46 Score=343.93 Aligned_cols=336 Identities=63% Similarity=1.081 Sum_probs=293.7
Q ss_pred eecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEE
Q 018094 15 GWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94 (361)
Q Consensus 15 ~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V 94 (361)
+|..+.+.+.+++.+++.|++.++|++||+.++++|++|++...|.+....+|.++|||++|+|+++|+++++|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V 81 (337)
T cd05283 2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRV 81 (337)
T ss_pred ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCEE
Confidence 35556677889999999999999999999999999999999988876555678899999999999999999999999999
Q ss_pred EEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHH
Q 018094 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSP 174 (361)
Q Consensus 95 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~ 174 (361)
++.+.++.|++|.+|.++.++.|+.....+.+....+....|+|++|+.++.+.++++|+++++++++.+.+...+||++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 161 (337)
T cd05283 82 GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSP 161 (337)
T ss_pred EEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHH
Confidence 87888889999999999999999887555444443444567999999999999999999999999999999999999999
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEc
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~ 254 (361)
++... +++|++++|.|+|.+|++++++|+.+|++++++++++++...+ +++|++.+++....+......+++|++||+
T Consensus 162 ~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~ 239 (337)
T cd05283 162 LKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIIDT 239 (337)
T ss_pred HHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEEC
Confidence 87765 7999999998889999999999999999999998887776554 789999888876655444445689999999
Q ss_pred CCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEEecccHH
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVN 334 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~~l~~~~ 334 (361)
+|....+..++++++++|+++.+|.......++...++.+++++.++.....++++.+++++.++++++.++.+++++++
T Consensus 240 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (337)
T cd05283 240 VSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGIN 319 (337)
T ss_pred CCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHHH
Confidence 99875588999999999999999986554466667777899999999888889999999999999998767899999999
Q ss_pred HHHHHHHcCCCcEEEEEE
Q 018094 335 TALERLAKADVRYRFVID 352 (361)
Q Consensus 335 ~a~~~~~~~~~~gkvvi~ 352 (361)
+||+.+.+++..||+|++
T Consensus 320 ~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 320 EALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHcCCCcceEeeC
Confidence 999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-47 Score=350.20 Aligned_cols=319 Identities=18% Similarity=0.193 Sum_probs=248.6
Q ss_pred ccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC----CCCCCcccccccEEEEEeCCCCCC
Q 018094 12 NAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN----AIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
...++.+ ..|+.++++++|.|+ +++||+|||+++|||++|++.+.|.+.. ..+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~-~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRL-VRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEE-eccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 3444455 467789999999995 9999999999999999999999886532 257999999999999998764 7
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
|++||||++.+.. .|+ |++| +..+.|.+..+. +...+|+|+||+.+|+++++++|+++++++|+ +..+
T Consensus 78 ~~vGdrV~~~~~~-~~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~ 145 (341)
T cd08237 78 YKVGTKVVMVPNT-PVE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTEL 145 (341)
T ss_pred cCCCCEEEECCCC-Cch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhch
Confidence 9999999887765 477 5566 355678764322 22346999999999999999999999998876 4457
Q ss_pred hhhhhHHHHhh--CCCCCCCEEEEEccchHHHHHHHHHHH-CC-CeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHH
Q 018094 168 GITVYSPLRFY--GLDKPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243 (361)
Q Consensus 168 ~~~a~~~l~~~--~~~~~g~~VlI~Gag~vG~~a~~la~~-~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 243 (361)
..++|+++... ..+++|++|||+|+|++|++++|+++. +| .+|++++++++++ +++++++.+..++ +...
T Consensus 146 ~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~-~~a~~~~~~~~~~----~~~~- 219 (341)
T cd08237 146 VSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKL-DLFSFADETYLID----DIPE- 219 (341)
T ss_pred HHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHH-HHHhhcCceeehh----hhhh-
Confidence 78889888653 345889999999999999999999986 65 4888888877665 4456666554321 1111
Q ss_pred hcCCccEEEEcCCC---cccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcC-
Q 018094 244 AMGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH- 319 (361)
Q Consensus 244 ~~~g~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~- 319 (361)
..++|+|||++|+ ..++..++++++++|+++.+|.......++...++.|++++.|+...+.+++++++++++++
T Consensus 220 -~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08237 220 -DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNP 298 (341)
T ss_pred -ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCC
Confidence 1269999999994 34688999999999999999976555667777788899999999887778899999999998
Q ss_pred ----CCceee-EEEecccH---HHHHHHHHcCCCcEEEEEEeC
Q 018094 320 ----NIRADI-EVIPADYV---NTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 320 ----~l~~~~-~~~~l~~~---~~a~~~~~~~~~~gkvvi~~~ 354 (361)
++++.+ ++|+++++ .++|+.+.++ ..||+|++++
T Consensus 299 ~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 299 EVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred cccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 355555 88998655 5555544444 6799999874
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=344.73 Aligned_cols=335 Identities=25% Similarity=0.332 Sum_probs=276.5
Q ss_pred ecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCC------CC
Q 018094 16 WAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSK------FK 89 (361)
Q Consensus 16 ~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~------~~ 89 (361)
+.+.+..+.+++.+++.|.++++||+||+.++++|++|++...|.++...+|.++|||++|+|+++|+++++ |+
T Consensus 4 ~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~ 83 (361)
T cd08231 4 AVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLK 83 (361)
T ss_pred EEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCccC
Confidence 334333357889999999999999999999999999999998887653467889999999999999999986 99
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC-ceEECCCCCCcccccccchhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~v~~iP~~~~~~~aa~l~~~~ 168 (361)
+||+|++.+.. .|++|.+|+.+.++.|.+..++..+.........|+|++|+.++++ +++++|++++.++++.+++++
T Consensus 84 ~Gd~V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~ 162 (361)
T cd08231 84 VGDRVTWSVGA-PCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCAL 162 (361)
T ss_pred CCCEEEEcccC-CCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHH
Confidence 99999776544 9999999999999999986543222111111246999999999986 799999999998899888999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCH------HHH
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ------DEM 241 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~------~~~ 241 (361)
.|||+++......++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++. .+++++|++.++++.+. ..+
T Consensus 163 ~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~i 241 (361)
T cd08231 163 ATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERL-ELAREFGADATIDIDELPDPQRRAIV 241 (361)
T ss_pred HHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCCeEEcCcccccHHHHHHH
Confidence 9999999888876799999999999999999999999999 898888777665 45589999888876542 234
Q ss_pred HHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHH
Q 018094 242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA 317 (361)
Q Consensus 242 ~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~ 317 (361)
.+.++ ++|++||++|+...+..++++++++|+++.+|.... ...++...++.+++++.++...+.++++++++++.
T Consensus 242 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (361)
T cd08231 242 RDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLE 321 (361)
T ss_pred HHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHHHH
Confidence 45544 799999999986668899999999999999997643 24555556788999999998878888999999999
Q ss_pred cC--CCc--eee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 318 KH--NIR--ADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 318 ~~--~l~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++ .++ +.+ ++|+++++++||+.+.+++ .+|+||++
T Consensus 322 ~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 361 (361)
T cd08231 322 RTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVVIDP 361 (361)
T ss_pred hccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEEeCC
Confidence 87 443 333 8899999999999998877 48999863
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-45 Score=338.46 Aligned_cols=327 Identities=28% Similarity=0.422 Sum_probs=273.0
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCC-C--C--------CCCCCCcccccccEEEE
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE-W--G--------NAIYPIVPGHEIVGVVT 79 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~-~--~--------~~~~p~~lG~e~~G~V~ 79 (361)
|+++++. .++.++++++|.|++.++||+||+.++++|++|++...+. . + ...+|.++|||++|+|+
T Consensus 1 mka~~~~---~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYH---GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEe---cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 4555553 3567889999999999999999999999999998866532 1 1 11368899999999999
Q ss_pred EeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcc-cCCccceEEEeccCceEECCCCCCc
Q 018094 80 EVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI-TYGGYSDIMVADEHFVVRIPEGTPL 158 (361)
Q Consensus 80 ~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~v~~iP~~~~~ 158 (361)
++|+++++|++||+|++.+.. .|++|.+|.+|.++.|....+. +.. ..|+|++|+.++...++++|+++++
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~a~~~~~~~~~~~~lP~~~~~ 149 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTI-KCGTCGACKRGLYNLCDSLGFI-------GLGGGGGGFAEYVVVPAYHVHKLPDNVPL 149 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCCcee-------ccCCCCCceeeEEEechHHeEECcCCCCH
Confidence 999999999999999776544 8999999999999999864321 111 2699999999999999999999999
Q ss_pred ccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 159 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
++++.+ .+..+||+++ ....+++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++. ++++++|++.++++.+
T Consensus 150 ~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~-~~~~~~ga~~~i~~~~ 226 (351)
T cd08233 150 EEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARR-ELAEELGATIVLDPTE 226 (351)
T ss_pred HHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEECCCc
Confidence 988765 5778999998 56678999999999999999999999999999 788887777765 4557899999988776
Q ss_pred HHH---HHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHH
Q 018094 238 QDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312 (361)
Q Consensus 238 ~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 312 (361)
.+. +.+.++ ++|++||++|...++..++++++++|+++.+|.......++...++.+++++.++.....++++++
T Consensus 227 ~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 306 (351)
T cd08233 227 VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEV 306 (351)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHH
Confidence 443 334443 599999999976668899999999999999998765567777778889999999887777889999
Q ss_pred HHHHHcCCCce--ee-EEEecccH-HHHHHHHHcCCCc-EEEEE
Q 018094 313 IDFAAKHNIRA--DI-EVIPADYV-NTALERLAKADVR-YRFVI 351 (361)
Q Consensus 313 ~~~l~~~~l~~--~~-~~~~l~~~-~~a~~~~~~~~~~-gkvvi 351 (361)
+++++++++++ .+ ++|+++++ ++|++.+.+++.. ||+||
T Consensus 307 ~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 307 IDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred HHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 99999999964 34 79999996 7899999999875 99987
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-44 Score=328.16 Aligned_cols=293 Identities=18% Similarity=0.214 Sum_probs=235.4
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccc-cchhhhhhCCCCC---CCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGIC-HSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
+|+.+++.++|.|+|+++||+||+++++|| ++|++...|.++. ..+|.++|||++|+|+++|+++ +|++||||++
T Consensus 9 ~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~ 87 (308)
T TIGR01202 9 GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFV 87 (308)
T ss_pred CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEE
Confidence 567799999999999999999999999996 7999988886543 2579999999999999999998 6999999976
Q ss_pred ccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHH
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 176 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~ 176 (361)
. |..|..|.. ...|+|+||+.+|++.++++|++++++. +.+ ....+||+++.
T Consensus 88 ~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~ 139 (308)
T TIGR01202 88 P-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVA 139 (308)
T ss_pred e-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHH
Confidence 2 333433211 1258999999999999999999998764 444 34688999987
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
.. ..+++++||+|+|++|++++|+||.+|++++++.+..+.+.+.+++ ..++++.+. ...++|++|||+|
T Consensus 140 ~~--~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~~-----~~~g~Dvvid~~G 209 (308)
T TIGR01202 140 GA--EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEKD-----PRRDYRAIYDASG 209 (308)
T ss_pred hc--ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhhc-----cCCCCCEEEECCC
Confidence 64 2468899999999999999999999999755554443333333333 334443221 2347999999999
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--e-EEEecccH
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIPADYV 333 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~ 333 (361)
+..++..++++++++|+++.+|......+++...++.|++++.++.....+++++++++++++++++. + ++|+|+++
T Consensus 210 ~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~ 289 (308)
T TIGR01202 210 DPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLITHQRPASDA 289 (308)
T ss_pred CHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccceeecHHHH
Confidence 97768999999999999999998765566666677889999999887777889999999999999863 4 89999999
Q ss_pred HHHHHHHHcCCCcEEEEEE
Q 018094 334 NTALERLAKADVRYRFVID 352 (361)
Q Consensus 334 ~~a~~~~~~~~~~gkvvi~ 352 (361)
++||+.+.++...+|++++
T Consensus 290 ~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 290 AEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHhcCcCceEEEeC
Confidence 9999998877777999874
|
|
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=327.58 Aligned_cols=323 Identities=22% Similarity=0.297 Sum_probs=263.1
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV 100 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 100 (361)
+++.+.+.++|.|.+.+++++||+.++++|++|++...|.++...+|.++|||++|+|+++|++++.+++||+|++.+..
T Consensus 8 ~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 87 (339)
T PRK10083 8 KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVI 87 (339)
T ss_pred cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCEEEEcccc
Confidence 46678889999999999999999999999999999988876544678999999999999999999999999999888766
Q ss_pred CCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCC
Q 018094 101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180 (361)
Q Consensus 101 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~ 180 (361)
.|+.|.+|.++.+++|....+. +....|+|++|+.++...++++|+++++++++ +...+.++|++ ....+
T Consensus 88 -~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~-~~~~~ 157 (339)
T PRK10083 88 -SCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV-TGRTG 157 (339)
T ss_pred -CCCCCccccCcCcccCCCCceE-------EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH-HHhcC
Confidence 6999999999999999764321 22346999999999999999999999988876 55667778854 45567
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcC---CccEEEEcCC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG---TMDGIIDTVS 256 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~-~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~---g~d~vid~~g 256 (361)
+++|++|+|+|+|.+|++++|+|+. +|+++++++...+.+.++++++|++.++++.+.+....+.+ ++|++||++|
T Consensus 158 ~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g 237 (339)
T PRK10083 158 PTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAAC 237 (339)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCC
Confidence 8999999999999999999999996 69965444444444456778999999988765443333322 4679999999
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--e-EEEecccH
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIPADYV 333 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~ 333 (361)
....+..++++++++|+++.+|.......+....+..+++++.+... ..+.++.+++++.++++++. + ++|+++++
T Consensus 238 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~ 316 (339)
T PRK10083 238 HPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRL-NANKFPVVIDWLSKGLIDPEKLITHTFDFQHV 316 (339)
T ss_pred CHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEec-ChhhHHHHHHHHHcCCCChHHheeeeecHHHH
Confidence 76668999999999999999997654334444455568888887754 45679999999999999873 3 89999999
Q ss_pred HHHHHHHHcCC-CcEEEEEEeC
Q 018094 334 NTALERLAKAD-VRYRFVIDVA 354 (361)
Q Consensus 334 ~~a~~~~~~~~-~~gkvvi~~~ 354 (361)
++|++.+.+++ ..+|+++++.
T Consensus 317 ~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 317 ADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred HHHHHHHhcCCCceEEEEEecC
Confidence 99999998653 4699999875
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-43 Score=336.12 Aligned_cols=327 Identities=19% Similarity=0.272 Sum_probs=256.9
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhh-hCCC-CC-----CCCCCcccccccEEEEEeCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLI-KNEW-GN-----AIYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~-~g~~-~~-----~~~p~~lG~e~~G~V~~vG~ 83 (361)
|++.++.+. .++.+++.++|.|++.++||+|||.++|||++|++.+ .|.. +. ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~-~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMY-GKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEE-cCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 445555554 4557999999999999999999999999999999976 4432 11 14688999999999999999
Q ss_pred CCC-CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC----ceEECCCCCCc
Q 018094 84 KVS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPL 158 (361)
Q Consensus 84 ~~~-~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~v~~iP~~~~~ 158 (361)
+++ +|++||||++.+.. .|++|.+|. + . +....|+|+||+.++++ .++++|+++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~-~-------~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~ 140 (410)
T cd08238 80 KWQGKYKPGQRFVIQPAL-ILPDGPSCP-G-------Y----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY 140 (410)
T ss_pred CccCCCCCCCEEEEcCCc-CCCCCCCCC-C-------c----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence 998 59999999876654 688888772 1 0 22357999999999987 68999999999
Q ss_pred cccccc-c--hhhhhhhHHH--------HhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCC---eEEEEeCCchhHHHH
Q 018094 159 DATAPL-L--CAGITVYSPL--------RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEA 223 (361)
Q Consensus 159 ~~aa~l-~--~~~~~a~~~l--------~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~---~Vi~~~~~~~~~~~~ 223 (361)
++|+.+ + +. .+++.++ .....+++|++|+|+|+ |++|++++|+|+.+|+ +|++++.+++++. .
T Consensus 141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~-~ 218 (410)
T cd08238 141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLA-R 218 (410)
T ss_pred HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHH-H
Confidence 988743 2 32 2233332 23456789999999985 9999999999999864 7888888887764 4
Q ss_pred HHHc--------CCc-EEecCCC-H---HHHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCC-CC--Ccc
Q 018094 224 IERL--------GAD-SFLVSRD-Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP-EK--PLE 285 (361)
Q Consensus 224 ~~~~--------g~~-~v~~~~~-~---~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~ 285 (361)
++++ |++ .++++.+ . +.+.++++ ++|++||++|...++..++++++++|+++.++.. .. ...
T Consensus 219 a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~ 298 (410)
T cd08238 219 AQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP 298 (410)
T ss_pred HHHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence 5776 665 4566543 2 23444554 7999999999877799999999999998877542 22 245
Q ss_pred cChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEEeCCcccCC
Q 018094 286 LPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360 (361)
Q Consensus 286 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~~~ 360 (361)
++...++.+++++.|+...+..+++++++++++|++++. + ++|+|+++++|++.+. ++..||+|+.++..++.+
T Consensus 299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~~~~~~~ 375 (410)
T cd08238 299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQKPLPLT 375 (410)
T ss_pred ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECCCCCCCc
Confidence 677778889999999988888899999999999999873 4 8999999999999999 777899999998776544
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=320.57 Aligned_cols=317 Identities=27% Similarity=0.531 Sum_probs=271.5
Q ss_pred ceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCC
Q 018094 27 PFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSC 106 (361)
Q Consensus 27 ~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c 106 (361)
++++|.|.+.++||+||++++++|++|++...|..+. ..|.++|||++|+|+.+|+++.+|++||+|++.++...|+.|
T Consensus 15 ~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~ 93 (338)
T PRK09422 15 VVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHC 93 (338)
T ss_pred EEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCC
Confidence 7889999999999999999999999999988776543 346789999999999999999999999999988888999999
Q ss_pred cccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCE
Q 018094 107 DSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186 (361)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~ 186 (361)
.+|..+..+.|.+... .+....|+|++|+.++..+++++|+++++++++.++..+.+||+++ ....+++|++
T Consensus 94 ~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~ 165 (338)
T PRK09422 94 EYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQW 165 (338)
T ss_pred hhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCE
Confidence 9999999999987532 1334579999999999999999999999999999999999999998 5567899999
Q ss_pred EEEEccchHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-H---HHHHHhcCCccEEEEcCCCcccH
Q 018094 187 VGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~-~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~---~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
|||+|+|.+|++++++|+. .|++|++++++++++..+ +++|++.+++++. . +.+.+..+++|++|++.++...+
T Consensus 166 vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~ 244 (338)
T PRK09422 166 IAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAF 244 (338)
T ss_pred EEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHH
Confidence 9999999999999999998 599999999888876555 8999988888753 2 34445556889555555555568
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEEecccHHHHHHHHH
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLA 341 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~~l~~~~~a~~~~~ 341 (361)
..++++++++|+++.+|.......++...+..++..+.++.....++++.+++++.++++.+.+..+++++++++|+.+.
T Consensus 245 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~~~~~~~~~a~~~~~ 324 (338)
T PRK09422 245 NQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRPLEDINDIFDEME 324 (338)
T ss_pred HHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEEEEcHHHHHHHHHHHH
Confidence 99999999999999998765445556666777889998877666788999999999999877677789999999999999
Q ss_pred cCCCcEEEEEEe
Q 018094 342 KADVRYRFVIDV 353 (361)
Q Consensus 342 ~~~~~gkvvi~~ 353 (361)
+++..||+++.+
T Consensus 325 ~~~~~gkvvv~~ 336 (338)
T PRK09422 325 QGKIQGRMVIDF 336 (338)
T ss_pred cCCccceEEEec
Confidence 999899999864
|
|
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=323.94 Aligned_cols=333 Identities=21% Similarity=0.275 Sum_probs=267.7
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++. .++.+++.+++.|.+.++||+||+.++++|++|++...+.+....+|.++|||++|+|+++|++++++++
T Consensus 1 mka~~~~---~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAML---GIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEc---cCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCC
Confidence 4555553 3445778888999999999999999999999999988876654466889999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCcccccccchhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~~aa~l~~~~ 168 (361)
||+|++.+.. .|+.|..|..|+++.|.+... + +..+....|+|++|+.++.. .++++|+++++++++.++..+
T Consensus 78 Gd~V~~~~~~-~~~~c~~c~~g~~~~~~~~~~---~-~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~ 152 (351)
T cd08285 78 GDRVIVPAIT-PDWRSVAAQRGYPSQSGGMLG---G-WKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMM 152 (351)
T ss_pred CCEEEEcCcC-CCCCCHHHHCcCcccCcCCCC---C-ccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccch
Confidence 9999877654 899999999999999986421 1 11123357999999999974 899999999999999998999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHh
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAA 244 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~ 244 (361)
.+||+++. ...++++++|||+|+|.+|++++|+|+.+|++ ++++++.+++ .++++++|+++++++.+.+ .+.++
T Consensus 153 ~ta~~~~~-~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~~ 230 (351)
T cd08285 153 STGFHGAE-LANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNR-VELAKEYGATDIVDYKNGDVVEQILKL 230 (351)
T ss_pred hhHHHHHH-ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHH-HHHHHHcCCceEecCCCCCHHHHHHHH
Confidence 99999864 45689999999998899999999999999995 6666666555 4667899999988876543 33344
Q ss_pred cC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC--cccCh--HHHhhCCcEEEeccc-CCHHHHHHHHHHHH
Q 018094 245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPA--FSLLMGRKIVGGSMI-GGMKETQEMIDFAA 317 (361)
Q Consensus 245 ~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~--~~~~~~~~~i~g~~~-~~~~~~~~~~~~l~ 317 (361)
.. ++|++||++|+...+..++++++++|+++.+|..... ..++. .....+..++.+... ...+++++++++++
T Consensus 231 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 310 (351)
T cd08285 231 TGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIE 310 (351)
T ss_pred hCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHH
Confidence 43 6999999999876689999999999999999876542 23332 222345666766543 24567899999999
Q ss_pred cCCCce---ee-EEEecccHHHHHHHHHcCCC-cEEEEEEe
Q 018094 318 KHNIRA---DI-EVIPADYVNTALERLAKADV-RYRFVIDV 353 (361)
Q Consensus 318 ~~~l~~---~~-~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 353 (361)
+|++++ .+ +.++++++++|++.+.+++. .+|+++++
T Consensus 311 ~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 311 YGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred cCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 999987 23 56999999999999998874 68999874
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-42 Score=323.84 Aligned_cols=332 Identities=23% Similarity=0.379 Sum_probs=264.9
Q ss_pred cccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018094 17 AARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 17 ~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
....+++.++++++|.|++.+++|+||++++++|++|++.+.|.+. ..+|.++|||++|+|+++|++++.+++||+|++
T Consensus 12 ~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 90 (373)
T cd08299 12 VLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPGDKVIP 90 (373)
T ss_pred EEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCCCCEEEE
Confidence 3345666788999999999999999999999999999999988663 357889999999999999999999999999977
Q ss_pred ccccCCCCCCcccccCCCCCCccccccc-ccccCC-------------CcccCCccceEEEeccCceEECCCCCCccccc
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTY-ANKYHD-------------GTITYGGYSDIMVADEHFVVRIPEGTPLDATA 162 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa 162 (361)
.+ .+.|++|.+|+++.++.|+...... .+...+ .....|+|+||+.++...++++|+++++++++
T Consensus 91 ~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa 169 (373)
T cd08299 91 LF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVC 169 (373)
T ss_pred CC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhh
Confidence 55 6799999999999999998753211 111110 11135899999999999999999999999999
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCH---
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ--- 238 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--- 238 (361)
.+.+++.+||+++.....+++|++|||+|+|.+|++++++|+.+|+ +|++++++++++..+ +++|++++++..+.
T Consensus 170 ~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i~~~~~~~~ 248 (373)
T cd08299 170 LIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECINPQDYKKP 248 (373)
T ss_pred eeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEecccccchh
Confidence 9999999999998777888999999999889999999999999999 799998887776555 88999888876532
Q ss_pred --HHHHHhc-CCccEEEEcCCCcccHHHHHHhh-ccCCEEEEecCCCCC--cccChHHHhhCCcEEEecccCC---HHHH
Q 018094 239 --DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGG---MKET 309 (361)
Q Consensus 239 --~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---~~~~ 309 (361)
+.+.+++ +++|++||++|+...+..++..+ +++|+++.+|..... ..+.... +.++.++.++.... ..++
T Consensus 249 ~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~ 327 (373)
T cd08299 249 IQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPML-LLTGRTWKGAVFGGWKSKDSV 327 (373)
T ss_pred HHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHH-HhcCCeEEEEEecCCccHHHH
Confidence 2233333 37999999999866677767765 579999999976532 3344332 34677888876543 3567
Q ss_pred HHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 310 QEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 310 ~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.++++.+.++.+++ .+ ++|+++++++|++.+.+++. .|+++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 328 PKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 77778777775543 34 89999999999999887764 5887753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=320.41 Aligned_cols=331 Identities=33% Similarity=0.487 Sum_probs=278.7
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+...+ +.+.+.+++.|.+.+++|+||+.++++|++|+....|.++. ..+|.++|||++|+|+++|+++.+
T Consensus 1 ~ka~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYG--KPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCC--CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 3455554322 45777888999999999999999999999999988876542 255789999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
|++||+|+..+.. .|+.|..|..|..++|.+..+. +....|+|++|+.++.++++++|+++++++++++++.
T Consensus 79 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~ 150 (340)
T cd05284 79 LKEGDPVVVHPPW-GCGTCRYCRRGEENYCENARFP-------GIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADA 150 (340)
T ss_pred CcCCCEEEEcCCC-CCCCChHHhCcCcccCCCCccc-------CccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcch
Confidence 9999999776654 8999999999999999986543 2345799999999999999999999999999999999
Q ss_pred hhhhhHHHHhh-CCCCCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEEecCCCH--HHHHH
Q 018094 168 GITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA 243 (361)
Q Consensus 168 ~~~a~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~ 243 (361)
+.+||+++... ..+.++++|||+|+|.+|++++++|+.+| .+|+++++++++...+ +++|+++++++++. +.+.+
T Consensus 151 ~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~ 229 (340)
T cd05284 151 GLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRE 229 (340)
T ss_pred HHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHH
Confidence 99999999876 45788999999999779999999999999 7999998887776544 89999988887654 33444
Q ss_pred hcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCC
Q 018094 244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321 (361)
Q Consensus 244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l 321 (361)
+.+ ++|+++|++|+......++++++++|+++.+|..+. ..++....+.+++++.++.....++++.+++++.++.+
T Consensus 230 ~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l 308 (340)
T cd05284 230 LTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKV 308 (340)
T ss_pred HhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCC
Confidence 443 699999999975568899999999999999987653 34444444578999999877677889999999999998
Q ss_pred ceeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 322 RADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 322 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++.++.|+++++++|++.+++++..||+++.+
T Consensus 309 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 309 KVEITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred CcceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 87668899999999999999999889999763
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=326.14 Aligned_cols=344 Identities=20% Similarity=0.252 Sum_probs=284.3
Q ss_pred cccccccceecc--cCCC-CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC----------CCCCC-Ccccc
Q 018094 7 QEHPKNAFGWAA--RDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG----------NAIYP-IVPGH 72 (361)
Q Consensus 7 ~~~~~~~~~~~~--~~~~-~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~lG~ 72 (361)
++++|++++++. .+.| ..+.+.++|.|.+.+++++||++++++|++|++...+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 577899999965 4444 6788899999999999999999999999999877655321 00223 37999
Q ss_pred cccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEEC
Q 018094 73 EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152 (361)
Q Consensus 73 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~i 152 (361)
|++|+|+++|+++.++++||+|++.+. ..|++|.+|.+|.++.|...... + .....|+|++|+.++...++++
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--g----~~~~~g~~ae~~~v~~~~~~~v 156 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCL-QVDLTAPDGRVGDPMLSSEQRIW--G----YETNFGSFAEFALVKDYQLMPK 156 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccc-cccCCchhhccCccccccccccc--c----ccCCCccceEEEEechHHeEEC
Confidence 999999999999999999999977644 48999999999999999764321 1 0124789999999999999999
Q ss_pred CCCCCcccccccchhhhhhhHHHHh--hCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC
Q 018094 153 PEGTPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA 229 (361)
Q Consensus 153 P~~~~~~~aa~l~~~~~~a~~~l~~--~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~ 229 (361)
|+++++++++.+.+...+||+++.. ...+.++++|+|+|+ |.+|++++++|+.+|+++++++++++++ +.++++|+
T Consensus 157 P~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~-~~~~~~g~ 235 (398)
T TIGR01751 157 PKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA-EYCRELGA 235 (398)
T ss_pred CCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH-HHHHHcCC
Confidence 9999999999999999999999865 466789999999998 9999999999999999998888777665 45578999
Q ss_pred cEEecCCCH-------------------------HHHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC
Q 018094 230 DSFLVSRDQ-------------------------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 230 ~~v~~~~~~-------------------------~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
+.++++.+. ..+.+++. ++|++|||+|... +..++++++++|+++.+|....
T Consensus 236 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~ 314 (398)
T TIGR01751 236 EAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRGGMVVICGGTTG 314 (398)
T ss_pred CEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccCCEEEEEccccC
Confidence 988886432 11223333 6999999999754 8899999999999999997654
Q ss_pred C-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCcccC
Q 018094 283 P-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359 (361)
Q Consensus 283 ~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~~~ 359 (361)
. ..++...++.++.++.++.....++++.+++++.++++.+.+ +++++++++++|+.+.+++..||+|+++..+.|-
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~~~~ 393 (398)
T TIGR01751 315 YNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLAPRPG 393 (398)
T ss_pred CCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCCCCCc
Confidence 3 455666667788899998877778889999999999988766 8999999999999999999999999999988654
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-42 Score=325.83 Aligned_cols=337 Identities=20% Similarity=0.229 Sum_probs=276.2
Q ss_pred cccccccceecc--cCCC-CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC----------CCCCCCccccc
Q 018094 7 QEHPKNAFGWAA--RDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG----------NAIYPIVPGHE 73 (361)
Q Consensus 7 ~~~~~~~~~~~~--~~~~-~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~lG~e 73 (361)
.|.+|+++++.. .+.+ ..+++.++|.|.++++||+||+.++++|++|++...+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 456778777642 2233 3578889999999999999999999999999988766411 11123589999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECC
Q 018094 74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153 (361)
Q Consensus 74 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP 153 (361)
++|+|+++|++++++++||+|++.+.. .|++|..|.++..++|....+... ....|+|++|+.++...++++|
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~g~------~~~~g~~a~y~~v~~~~l~~iP 161 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSV-WDGNDPERAGGDPMFDPSQRIWGY------ETNYGSFAQFALVQATQLMPKP 161 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccc-cccCcccccccccccccccccccc------cCCCCcceeEEEechHHeEECC
Confidence 999999999999999999999776544 799999999999999986533211 1246999999999999999999
Q ss_pred CCCCcccccccchhhhhhhHHHHhh--CCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc
Q 018094 154 EGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230 (361)
Q Consensus 154 ~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~ 230 (361)
+++++++++.+++.+.+||+++... +.++++++|+|+|+ |.+|++++++|+.+|+++++++++++++. +++++|++
T Consensus 162 ~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~-~~~~~G~~ 240 (393)
T cd08246 162 KHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE-YCRALGAE 240 (393)
T ss_pred CCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH-HHHHcCCC
Confidence 9999999999999999999998765 56789999999997 99999999999999999988888777764 55789998
Q ss_pred EEecCCCH-------------------------HHHHHhcC---CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC
Q 018094 231 SFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 231 ~v~~~~~~-------------------------~~~~~~~~---g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
++++.++. +.+.++++ ++|++||++|+. .+..++++++++|+++.+|....
T Consensus 241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 319 (393)
T cd08246 241 GVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTG 319 (393)
T ss_pred EEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCC
Confidence 88875321 12334443 699999999985 48899999999999999986543
Q ss_pred -CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcC-CCcEEEEEE
Q 018094 283 -PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKA-DVRYRFVID 352 (361)
Q Consensus 283 -~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvi~ 352 (361)
...++...++.++.++.++.....+++..+++++.++.+.+.+ ++|++++++++++.+.++ +..||+++-
T Consensus 320 ~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 320 YNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence 2345566677888999998888778899999999999988655 899999999999999988 788999863
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=317.79 Aligned_cols=335 Identities=26% Similarity=0.403 Sum_probs=269.9
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++ .+..+.+++++++.|.+.+++|+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|+++.++++
T Consensus 3 ~~a~~~--~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 3 TTAAVV--REPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred cEEeee--ccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 455544 33334678889999999999999999999999999999888665 346789999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccc-cccccCCC---------------cccCCccceEEEeccCceEECCC
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YANKYHDG---------------TITYGGYSDIMVADEHFVVRIPE 154 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~~~~~~---------------~~~~g~~~~~~~v~~~~v~~iP~ 154 (361)
||+|++.+ . .|+.|.+|+.+..++|...... +.+...+| ....|+|++|+.++..+++++|+
T Consensus 80 Gd~V~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSF-A-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEcc-c-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 99998765 3 7999999999999999864311 01110000 12358999999999999999999
Q ss_pred CCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEe
Q 018094 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFL 233 (361)
Q Consensus 155 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~ 233 (361)
++++++++.+++++.+||.++.....++++++|||+|+|.+|++++|+|+.+|++ ++++++++++ .++++++|++.++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k-~~~~~~~g~~~~i 236 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSR-LELAKELGATHVI 236 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHH-HHHHHHcCCcEEe
Confidence 9999999999999999999988878889999999998899999999999999995 6666666555 4566899999888
Q ss_pred cCCCHH---HHHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC--CCcccChHHHhhCCcEEEecccCC--
Q 018094 234 VSRDQD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMIGG-- 305 (361)
Q Consensus 234 ~~~~~~---~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~~~-- 305 (361)
++.+.+ .+.+.+ .++|++||++|+...+..++++++++|+++.+|... ....++...++.+++++.++....
T Consensus 237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (365)
T cd08278 237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV 316 (365)
T ss_pred cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence 876532 334333 379999999997666899999999999999998753 334566666667889988765432
Q ss_pred -HHHHHHHHHHHHcCCCce--eeEEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 306 -MKETQEMIDFAAKHNIRA--DIEVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 306 -~~~~~~~~~~l~~~~l~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
.+.+.++++++.++++.+ ....|++++++++++.+++++. -|++++
T Consensus 317 ~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 317 PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence 355788999999998864 2378999999999999988775 487764
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=315.42 Aligned_cols=328 Identities=25% Similarity=0.371 Sum_probs=274.6
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++... ...+++.++|.|.+.+++++||++++++|++|++...|.++...+|.++|||++|+|+.+|+++..+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVILPGF--KQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEEcCC--CCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCC
Confidence 445554322 234888999999999999999999999999999988886655566789999999999999999989999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|++.++. .|++|.+|.++.++.|.+.... +....|+|++|+.++...++++|+++++.+++.+.+.+.+
T Consensus 79 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~ 150 (334)
T PRK13771 79 GDRVASLLYA-PDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM 150 (334)
T ss_pred CCEEEECCCC-CCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHH
Confidence 9999877664 9999999999999999885321 2345799999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-HHHHHHhcCCc
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM 248 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~g~ 248 (361)
||+++... .+.++++|+|+|+ |.+|++++++|+.+|++++++++++++...+ +++ ++++++..+ .+.+.+. +++
T Consensus 151 a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~ 226 (334)
T PRK13771 151 VYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGA 226 (334)
T ss_pred HHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCC
Confidence 99998877 7899999999998 9999999999999999999999988776554 777 666665542 1233333 479
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc--ccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI- 325 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~- 325 (361)
|++||++|+.. ...++++++++|+++.+|...... .+.....+.+++++.+......++++.+++++.++.+++.+
T Consensus 227 d~~ld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 305 (334)
T PRK13771 227 DIVIETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIG 305 (334)
T ss_pred cEEEEcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEe
Confidence 99999999865 889999999999999999754322 24444445688899887766788899999999999988655
Q ss_pred EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 326 EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.++++++++||+.+++++..||+++++
T Consensus 306 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 306 AEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred eeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 8999999999999999888889999864
|
|
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=319.30 Aligned_cols=336 Identities=22% Similarity=0.264 Sum_probs=272.2
Q ss_pred cccceecccCCCCCccceeeeccCCC-CCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+. .++.+++.++|.|.+. +++|+||+.++++|++|++...|.++...+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWH---GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEe---cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCC
Confidence 4555552 4678889999999984 99999999999999999999988776556788999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCccccccc----------ccccC---CCcccCCccceEEEeccC--ceEECCC
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY----------ANKYH---DGTITYGGYSDIMVADEH--FVVRIPE 154 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~~g~~~~~~~v~~~--~v~~iP~ 154 (361)
+||+|++.+.+ .|++|.+|..+.++.|++..... .+... ......|+|++|+.++.. .++++|+
T Consensus 78 ~Gd~V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 78 VGDRVVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCEEEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 99999776555 69999999999999999864321 00000 001236999999999987 8999999
Q ss_pred CCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEe
Q 018094 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL 233 (361)
Q Consensus 155 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~ 233 (361)
++++++|+.+++...+||+++ ....++++++|||+|+|.+|++++++|+.+|+ +|+++++++++. +++++++...++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~-~~~~~~~~~~vi 234 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERL-EMARSHLGAETI 234 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHcCCcEEE
Confidence 999999999999999999998 66778999999999889999999999999998 588888887665 455777433566
Q ss_pred cCCCHH-H---HHHhcC--CccEEEEcCCCc---------------------ccHHHHHHhhccCCEEEEecCCCC-Ccc
Q 018094 234 VSRDQD-E---MQAAMG--TMDGIIDTVSAV---------------------HPLMPLIGLLKSQGKLVLVGAPEK-PLE 285 (361)
Q Consensus 234 ~~~~~~-~---~~~~~~--g~d~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~-~~~ 285 (361)
++...+ . +...+. ++|++||++|+. ..+..++++++++|+++.+|..+. ...
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 655432 2 333333 699999999863 247889999999999999987654 234
Q ss_pred cChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCC-CcEEEEEE
Q 018094 286 LPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKAD-VRYRFVID 352 (361)
Q Consensus 286 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~-~~gkvvi~ 352 (361)
++...++.+++++.++.....+.+..+++++.++++.+. . +.|+++++++|++.+.+++ ..+|+|++
T Consensus 315 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred cCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 555556789999999876666789999999999998863 3 8899999999999998877 45899985
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=314.67 Aligned_cols=331 Identities=26% Similarity=0.362 Sum_probs=279.5
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.+...+ ..+++.++|.|.+.+++|+||+.++++|++|+....|.++...+|.++|+|++|+|+.+|+++..+++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFG--EPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCC--CCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCC
Confidence 4566654333 34788889999999999999999999999999988887655566889999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCcccccccchhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~~aa~l~~~~ 168 (361)
||+|+. ++...|++|.+|..|..+.|++... .+....|+|++|+.++.. +++++|+++++++++.+++.+
T Consensus 79 Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~ 150 (345)
T cd08260 79 GDRVTV-PFVLGCGTCPYCRAGDSNVCEHQVQ-------PGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRF 150 (345)
T ss_pred CCEEEE-CCCCCCCCCccccCcCcccCCCCcc-------cccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccch
Confidence 999977 4556899999999999999997421 123347999999999974 899999999999999999999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-HHH---HHHh
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDE---MQAA 244 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~---~~~~ 244 (361)
.+||+++.....+.++++|+|+|+|.+|++++++|+.+|++|+++++++++...+ +++|++.+++.+. .+. +.++
T Consensus 151 ~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~ 229 (345)
T cd08260 151 ATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDL 229 (345)
T ss_pred HHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHH
Confidence 9999999777788999999999999999999999999999999999888887555 7899999888765 332 3333
Q ss_pred cC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC---cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018094 245 MG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP---LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320 (361)
Q Consensus 245 ~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~ 320 (361)
.. ++|++||++|+...+..++++++++|+++.+|..... ..++...++.+++++.++.....+.++.+++++++++
T Consensus 230 ~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 309 (345)
T cd08260 230 TGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGK 309 (345)
T ss_pred hCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCC
Confidence 33 7999999999755588899999999999999975432 3455566668999999987777788999999999998
Q ss_pred Ccee---eEEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 321 IRAD---IEVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 321 l~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+.+. .+.+++++++++++.+++++..||+|++
T Consensus 310 i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 310 LDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 8753 3889999999999999999988998864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=316.44 Aligned_cols=331 Identities=31% Similarity=0.461 Sum_probs=275.7
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC------------CCCCCCcccccccEEE
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG------------NAIYPIVPGHEIVGVV 78 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~~lG~e~~G~V 78 (361)
|+++.+.. ....++++++|.|++.++||+||+.++++|++|++...|.++ ...+|.++|||++|+|
T Consensus 1 ~~a~~~~~--~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVE--PGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEecc--CCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 34544433 334478889999999999999999999999999998877543 1234678999999999
Q ss_pred EEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCc
Q 018094 79 TEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL 158 (361)
Q Consensus 79 ~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~ 158 (361)
+++|++++++++||+|+..++. .|++|..|.++..++|.+..+. +....|++++|+.++.+.++++|+++++
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~~p~~~s~ 150 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL-------GIFQDGGYAEYVIVPHSRYLVDPGGLDP 150 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce-------eeeccCcceeeEEecHHHeeeCCCCCCH
Confidence 9999999999999999877666 8999999999999999774322 1225689999999999999999999999
Q ss_pred ccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 159 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
.+++.+.+.+.+||++++....++++++|||+|+|.+|++++|+|+.+|+ +|+++++++++. ..++++|++.+++.++
T Consensus 151 ~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~ 229 (350)
T cd08240 151 ALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKL-EAAKAAGADVVVNGSD 229 (350)
T ss_pred HHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCcEEecCCC
Confidence 99999999999999999888777789999999889999999999999999 677777776665 4448899988887655
Q ss_pred HH---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHH
Q 018094 238 QD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMI 313 (361)
Q Consensus 238 ~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 313 (361)
.+ .+.+..+ ++|++||+.|....+..++++|+++|+++.+|.......++......+++++.++.....+++..++
T Consensus 230 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 309 (350)
T cd08240 230 PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELV 309 (350)
T ss_pred ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHH
Confidence 33 3444433 7999999999766689999999999999999876554344444455689999998877778899999
Q ss_pred HHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 314 DFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 314 ~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++++++.+++.. ..|++++++++++.+.+++..||++++
T Consensus 310 ~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 310 ALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred HHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 999999988654 899999999999999998888999975
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=314.04 Aligned_cols=303 Identities=20% Similarity=0.262 Sum_probs=246.8
Q ss_pred cccceecccCCC---CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCC
Q 018094 11 KNAFGWAARDTS---GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 11 ~~~~~~~~~~~~---~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
|+++++..++.| ..+++.++|.|.|+++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 456666555544 46788889999999999999999999999999998886643 35688999999999999999999
Q ss_pred C-CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 87 K-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 87 ~-~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
+ |++||+|++.+ ...|+|++|+.+|++.++++|++++++++++++
T Consensus 81 ~~~~vGd~V~~~~----------------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~ 126 (324)
T cd08291 81 AQSLIGKRVAFLA----------------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSF 126 (324)
T ss_pred ccCCCCCEEEecC----------------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhc
Confidence 6 99999997421 014899999999999999999999999999888
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEE-c-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH---
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVV-G-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE--- 240 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~-G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~--- 240 (361)
+...|||..+. .... ++++++|+ | +|.+|++++|+|+.+|++|++++++++++. .++++|+++++++.+.+.
T Consensus 127 ~~~~ta~~~~~-~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~-~~~~~g~~~~i~~~~~~~~~~ 203 (324)
T cd08291 127 VNPLTALGMLE-TARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVD-LLKKIGAEYVLNSSDPDFLED 203 (324)
T ss_pred ccHHHHHHHHH-hhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHcCCcEEEECCCccHHHH
Confidence 88889986553 3444 55566665 5 599999999999999999999988877764 458899999998766443
Q ss_pred HHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-c-ccChHHHhhCCcEEEecccCC------HHHHH
Q 018094 241 MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-ELPAFSLLMGRKIVGGSMIGG------MKETQ 310 (361)
Q Consensus 241 ~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~g~~~~~------~~~~~ 310 (361)
+.+.++ ++|++||++|+.. ....+++++++|+++.+|..... . .++...++.+++++.++.... .+.++
T Consensus 204 v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (324)
T cd08291 204 LKELIAKLNATIFFDAVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVK 282 (324)
T ss_pred HHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHH
Confidence 444443 7999999999876 77789999999999999875432 2 355666778999998876533 34678
Q ss_pred HHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 311 EMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 311 ~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
.++++++ +++++.+ ++|+|+++++||+.+.+++..||+++.
T Consensus 283 ~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 283 KLKKLVK-TELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHh-CccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 8888888 8888877 899999999999999999999999873
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-41 Score=313.95 Aligned_cols=327 Identities=24% Similarity=0.392 Sum_probs=265.6
Q ss_pred CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018094 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 99 (361)
+.++.+.++++|.|.+.+++|+||+.++++|++|++.+.+.+. ..+|.++|||++|+|+++|++++.+++||+|++.+.
T Consensus 8 ~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~ 86 (365)
T cd05279 8 EKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFG 86 (365)
T ss_pred cCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCC
Confidence 4455688899999999999999999999999999999887654 346789999999999999999999999999987665
Q ss_pred cCCCCCCcccccCCCCCCccccccc-ccccCC-------------CcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 100 VGSCRSCDSCAIDLENYCPKVIMTY-ANKYHD-------------GTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 100 ~~~c~~c~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
..|++|.+|.++.+++|+.....+ .+.... +....|+|++|+.++++.++++|+++++++++.+.
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~ 165 (365)
T cd05279 87 -PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIG 165 (365)
T ss_pred -CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhc
Confidence 589999999999999998764321 111111 11134799999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCH--H---
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--D--- 239 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--~--- 239 (361)
+++.+||+++.....+++|++|||+|+|.+|++++++|+.+|++ ++++++++++. ++++++|++++++..+. +
T Consensus 166 ~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~-~~~~~~g~~~~v~~~~~~~~~~~ 244 (365)
T cd05279 166 CGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKF-EKAKQLGATECINPRDQDKPIVE 244 (365)
T ss_pred cchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCCeecccccccchHHH
Confidence 99999999988888899999999998899999999999999996 55555565554 55589999888876554 2
Q ss_pred HHHHhc-CCccEEEEcCCCcccHHHHHHhhc-cCCEEEEecCCC--CCcccChHHHhhCCcEEEeccc---CCHHHHHHH
Q 018094 240 EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMI---GGMKETQEM 312 (361)
Q Consensus 240 ~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~---~~~~~~~~~ 312 (361)
.+.+++ +++|++||++|....+..++++++ ++|+++.+|... ....++...+ .++.++.|+.. ...+.+..+
T Consensus 245 ~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~ 323 (365)
T cd05279 245 VLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKL 323 (365)
T ss_pred HHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHH
Confidence 233333 379999999987666889999999 999999998753 3455666665 67788887643 345678889
Q ss_pred HHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 313 IDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 313 ~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
++++.++.+.+. . ++++++++++||+.+++++. -|+++
T Consensus 324 ~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 324 VALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred HHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence 999999988753 3 89999999999999987765 46665
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-41 Score=312.89 Aligned_cols=328 Identities=21% Similarity=0.265 Sum_probs=263.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC---------CCCCCcccccccEEEEEe
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN---------AIYPIVPGHEIVGVVTEV 81 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~~lG~e~~G~V~~v 81 (361)
|+++++ . .|+.+++++++.|++.+++|+||++++++|++|++...|.... ..+|.++|||++|+|+++
T Consensus 1 mka~~~--~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVC--H-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEE--e-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 344444 2 4567889999999999999999999999999999988775311 145778999999999999
Q ss_pred CCCCC--CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC-ceEECCCCCCc
Q 018094 82 GSKVS--KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH-FVVRIPEGTPL 158 (361)
Q Consensus 82 G~~~~--~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~-~v~~iP~~~~~ 158 (361)
|++++ .|++||+|+..+ ...|++|..|..|.+++|..... .+. .....|+|++|+.++++ .++++|+++++
T Consensus 78 G~~v~~~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~g~---~~~~~g~~~~~~~~~~~~~~~~lP~~~~~ 151 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQ-IVPCWNCRFCNRGQYWMCQKHDL--YGF---QNNVNGGMAEYMRFPKEAIVHKVPDDIPP 151 (350)
T ss_pred CCCcccCCCCCCCEEEECC-cCCCCCChHHhCcCcccCcCccc--eee---ccCCCCcceeeEEcccccceEECCCCCCH
Confidence 99998 899999997654 45999999999999999975421 111 01246999999999988 67999999999
Q ss_pred ccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeE-EEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV-TVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 159 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~V-i~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
++++.+ .++.++|+++ ....++++++|||.|+|.+|++++++|+.+|+++ +++++++++ ..+++++|++.+++..+
T Consensus 152 ~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~-~~~~~~~g~~~v~~~~~ 228 (350)
T cd08256 152 EDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDER-LALARKFGADVVLNPPE 228 (350)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHH-HHHHHHcCCcEEecCCC
Confidence 999888 8889999998 5667899999999777999999999999999864 455555544 46778999988887654
Q ss_pred H---HHHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHH-hhCCcEEEecccCCHHHHHH
Q 018094 238 Q---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSL-LMGRKIVGGSMIGGMKETQE 311 (361)
Q Consensus 238 ~---~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~ 311 (361)
. +.+.+.++ ++|++||++|+...+..++++++++|+++.+|.......++...+ ..+++++.++.... ..+.+
T Consensus 229 ~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~ 307 (350)
T cd08256 229 VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGP-YCYPI 307 (350)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCc-hhHHH
Confidence 3 34444444 699999999975558889999999999999987654444444433 35778888876543 46888
Q ss_pred HHHHHHcCCCcee---eEEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 312 MIDFAAKHNIRAD---IEVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 312 ~~~~l~~~~l~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
+++++.++.+++. .++|+++++++||+.+++++..+|+++
T Consensus 308 ~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 308 AIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred HHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 9999999999863 489999999999999999988899874
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-41 Score=309.24 Aligned_cols=322 Identities=47% Similarity=0.818 Sum_probs=275.8
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV 100 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 100 (361)
..+.+++.++|.|.+.+++++|++.++++|++|++...|.+....+|.++|||++|+|+++|+++.++++||+|++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~ 87 (330)
T cd08245 8 AGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLV 87 (330)
T ss_pred CCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEEEEcccc
Confidence 33578888999999999999999999999999999988866545667899999999999999999999999999887777
Q ss_pred CCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCC
Q 018094 101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180 (361)
Q Consensus 101 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~ 180 (361)
..|++|.+|.++..+.|++..+. +....|+|++|+.++..+++++|+++++++++.+.+.+.+||+++.. ..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~ 159 (330)
T cd08245 88 GSCGRCEYCRRGLENLCQKAVNT-------GYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AG 159 (330)
T ss_pred CCCCCChhhhCcCcccCcCcccc-------CcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hC
Confidence 88999999999999999986432 12246899999999999999999999999999999999999999876 56
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
++++++|||+|+|.+|++++++|+.+|.+|+++++++++...+ +++|++.+++....+...+..+++|++||+++....
T Consensus 160 ~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~ 238 (330)
T cd08245 160 PRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAA 238 (330)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHH
Confidence 8999999999988899999999999999999999988877555 789988887765543333333579999999887666
Q ss_pred HHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEEecccHHHHHHH
Q 018094 261 LMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALER 339 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~~l~~~~~a~~~ 339 (361)
...++++++++|+++.+|..... ..+....++.++.++.++.......++.+++++.++.+.+..+.+++++++++|+.
T Consensus 239 ~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~ 318 (330)
T cd08245 239 AEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQANEAYER 318 (330)
T ss_pred HHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHHHHHHHH
Confidence 88999999999999999865332 23334557788999999888778889999999999998876689999999999999
Q ss_pred HHcCCCcEEEEE
Q 018094 340 LAKADVRYRFVI 351 (361)
Q Consensus 340 ~~~~~~~gkvvi 351 (361)
+.+++..||+|+
T Consensus 319 ~~~~~~~~~~v~ 330 (330)
T cd08245 319 MEKGDVRFRFVL 330 (330)
T ss_pred HHcCCCCcceeC
Confidence 999998899875
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-41 Score=312.09 Aligned_cols=325 Identities=23% Similarity=0.347 Sum_probs=267.3
Q ss_pred CCCCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018094 21 TSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 99 (361)
.++.+.+.++|.|.+ .+++|+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|++++++++||+|+.. .
T Consensus 8 ~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-~ 86 (347)
T cd05278 8 GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVP-C 86 (347)
T ss_pred cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCEEEec-C
Confidence 355688889999999 99999999999999999999998877666778899999999999999999999999999775 5
Q ss_pred cCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCcccccccchhhhhhhHHHHh
Q 018094 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAGITVYSPLRF 177 (361)
Q Consensus 100 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~ 177 (361)
.+.||.|.+|..|++.+|........ .+....|+|++|+.++.+ +++++|+++++++++.+++.+.+||+++ .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~ 161 (347)
T cd05278 87 ITFCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-E 161 (347)
T ss_pred CCCCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-h
Confidence 56999999999999999987432111 123357999999999987 9999999999999999999999999998 5
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGI 251 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~v 251 (361)
...++++++|||.|+|.+|++++|+|+.+|. +++++.+++++ .++++++|++.++++.+.+ .+.+.++ ++|++
T Consensus 162 ~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~v 240 (347)
T cd05278 162 LAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPER-LDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCV 240 (347)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEE
Confidence 5678999999998889999999999999997 78777666555 4566889998888876543 3334433 79999
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEecCCCCCccc-ChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee---eEE
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL-PAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD---IEV 327 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~---~~~ 327 (361)
||++++...+..++++++++|+++.+|........ .....+.+++++.++.....+.++.+++++.++.+++. ...
T Consensus 241 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 320 (347)
T cd05278 241 IEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHR 320 (347)
T ss_pred EEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEE
Confidence 99999854588999999999999999865433211 11223467888887655556788999999999998863 378
Q ss_pred EecccHHHHHHHHHcCCC-cEEEEEE
Q 018094 328 IPADYVNTALERLAKADV-RYRFVID 352 (361)
Q Consensus 328 ~~l~~~~~a~~~~~~~~~-~gkvvi~ 352 (361)
+++++++++++.+..++. .+|++++
T Consensus 321 ~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 321 FPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred ecHHHHHHHHHHHhcCCCCceEEEec
Confidence 999999999999988877 6899875
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-40 Score=308.55 Aligned_cols=333 Identities=32% Similarity=0.583 Sum_probs=282.6
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+ +..+++.+++.|.+.+++++||+.++++|++|+....+.++. ...|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 5666665433 558889999999999999999999999999999988776542 23466889999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+..+....|++|.+|..+..++|....+. +....|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ 152 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV 152 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence 9999988776678999999999999999875322 234568999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
+||+++... .++++++|||+|+ +.+|++++++|+++|++|+++++++++...+ +++|++.++++.+.+ .+.+..
T Consensus 153 ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~ 230 (341)
T cd08297 153 TVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT 230 (341)
T ss_pred HHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence 999998775 6899999999998 7799999999999999999999998876555 789999888876543 344444
Q ss_pred --CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018094 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322 (361)
Q Consensus 246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~ 322 (361)
.++|++||+.+....+..++++++++|+++.+|..... ..++...++.+++++.++.....++++.+++++.+++++
T Consensus 231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 310 (341)
T cd08297 231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK 310 (341)
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc
Confidence 37999999777666688999999999999999876543 355666667899999987766678899999999999998
Q ss_pred eeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 323 ADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 323 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.++.|++++++++++.+..++..||+++++
T Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 311 PHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 7668899999999999999998889999875
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=310.49 Aligned_cols=294 Identities=19% Similarity=0.173 Sum_probs=238.8
Q ss_pred CCcccee---eecc-CCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccc--cccEEEEEeCCCCCCCCCCCEEEE
Q 018094 23 GVLSPFH---FSRR-ATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGH--EIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 23 ~~l~~~~---~~~p-~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~--e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
.++++++ ++.| +++++|||||+.++++|+.|.....+......+|.++|+ |++|+|+.+|+++++|++||+|+.
T Consensus 25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~ 104 (348)
T PLN03154 25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG 104 (348)
T ss_pred ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe
Confidence 3455555 3555 358999999999999999987654432222245789998 889999999999999999999962
Q ss_pred ccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEE--CCCCCCcc-cccccchhhhhh
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVR--IPEGTPLD-ATAPLLCAGITV 171 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~--iP~~~~~~-~aa~l~~~~~~a 171 (361)
.|+|+||..++.. ++++ +|++++++ +|+++++++.||
T Consensus 105 --------------------------------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA 146 (348)
T PLN03154 105 --------------------------------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTA 146 (348)
T ss_pred --------------------------------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHH
Confidence 3679999999875 3544 59999986 688999999999
Q ss_pred hHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH----HHHHHhcC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ----DEMQAAMG 246 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~----~~~~~~~~ 246 (361)
|+++.....+++|++|||+|+ |++|++++|+||.+|++|+++++++++...+.+++|++.++++.+. +.+.+.++
T Consensus 147 ~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~ 226 (348)
T PLN03154 147 YAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP 226 (348)
T ss_pred HHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC
Confidence 999988888899999999998 9999999999999999999988887776554337999999987642 23344443
Q ss_pred -CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-c-----ccChHHHhhCCcEEEecccCC-----HHHHHHHHH
Q 018094 247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGRKIVGGSMIGG-----MKETQEMID 314 (361)
Q Consensus 247 -g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~ 314 (361)
++|++||++|+. .+..++++++++|+++.+|...+. . .++...++.+++++.|+.... .+.++++++
T Consensus 227 ~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~ 305 (348)
T PLN03154 227 EGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSR 305 (348)
T ss_pred CCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHH
Confidence 799999999986 489999999999999999975432 1 124556778999999886542 245788999
Q ss_pred HHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 315 ~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
++++|++++.+ ++|+|+++++||+.+++++..||+|+++.+
T Consensus 306 l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 306 YYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred HHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 99999999877 689999999999999999999999999865
|
|
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=310.20 Aligned_cols=335 Identities=24% Similarity=0.391 Sum_probs=271.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.+...+ +.+++.++|.|.+.+++|+||+.++++|+.|+....|.++ ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~--~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEVG--KPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecCC--CCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCC
Confidence 4555554332 4578889999999999999999999999999998887665 356778999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccc-------------cccCCCcccCCccceEEEeccCceEECCCCCC
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-------------NKYHDGTITYGGYSDIMVADEHFVVRIPEGTP 157 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~ 157 (361)
||+|+..+ .+.|++|++|.++..++|++....-. +.........|+|++|+.++.+.++++|++++
T Consensus 78 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 78 GDHVVLSW-IPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCEEEECC-CCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99997664 55999999999999999987522101 11111112468999999999999999999999
Q ss_pred cccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 158 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
+++++.+++.+.+||.++.....+.++++|||+|+|.+|++++++|+.+|++ |+++++++++. ++++++|++++++.+
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~-~~~~~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKL-ELARRFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHH-HHHHHhCCeEEeCCC
Confidence 9999999999999999988888889999999998899999999999999996 87877777665 455889998888876
Q ss_pred CHH---HHHHhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC--CCcccChHHHhhCCcEEEeccc---CCH
Q 018094 237 DQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGRKIVGGSMI---GGM 306 (361)
Q Consensus 237 ~~~---~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~~---~~~ 306 (361)
..+ .+.+.. .++|++||++++...+..++++++++|+++.+|... ....++...+..++..+.++.. ...
T Consensus 236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (363)
T cd08279 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPR 315 (363)
T ss_pred CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcH
Confidence 533 344443 369999999997666889999999999999998654 2345666666667777777643 235
Q ss_pred HHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEE
Q 018094 307 KETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFV 350 (361)
Q Consensus 307 ~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvv 350 (361)
+.++++++++.++++++. + ++|+++++++||+.+.+++..+.|+
T Consensus 316 ~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 316 RDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 678999999999998752 3 8899999999999999888765554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=307.03 Aligned_cols=321 Identities=26% Similarity=0.367 Sum_probs=265.3
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++...+ ++.+++.+++.|+++++||+||+.++++|++|++...+. ....+|.++|||++|+|+.+|+++++|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKK 78 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCC
Confidence 4555554333 456777888888899999999999999999999887642 22235778999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|++.+.. .|++|.+|..|+++.|++..+. +....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~ 150 (325)
T cd08264 79 GDRVVVYNRV-FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALT 150 (325)
T ss_pred CCEEEECCCc-CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHH
Confidence 9999877655 8999999999999999975332 2335789999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-HHHHHHhcCCc
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM 248 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~g~ 248 (361)
||+++.. ..++++++|+|+|+ |.+|++++++|+.+|++|+++++ . +.++++|++++++.++ .+.+.++++++
T Consensus 151 a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~-~~~~~~g~~~~~~~~~~~~~l~~~~~~~ 224 (325)
T cd08264 151 AYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----K-DWLKEFGADEVVDYDEVEEKVKEITKMA 224 (325)
T ss_pred HHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----H-HHHHHhCCCeeecchHHHHHHHHHhCCC
Confidence 9999876 77899999999998 99999999999999999988863 2 4447899988887654 23344444789
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEecCCC-CCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-E
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-E 326 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~ 326 (361)
|++||++|+. .+..++++++++|+++.+|... ....++...++.++.++.++..++.+.++.+++++...+ ..+ +
T Consensus 225 d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~ 301 (325)
T cd08264 225 DVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK--VKVWK 301 (325)
T ss_pred CEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC--ceeEE
Confidence 9999999985 4899999999999999998742 235566677778889999988888888999999996443 333 8
Q ss_pred EEecccHHHHHHHHHcCCCcEEEE
Q 018094 327 VIPADYVNTALERLAKADVRYRFV 350 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvv 350 (361)
+|+++++++|++.+.+++..+|++
T Consensus 302 ~~~~~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 302 TFKLEEAKEALKELFSKERDGRIL 325 (325)
T ss_pred EEcHHHHHHHHHHHHcCCCccccC
Confidence 999999999999999888777763
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=305.37 Aligned_cols=333 Identities=33% Similarity=0.477 Sum_probs=281.3
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+.+. +...+.|.|.+.+++|+||+.++++|+.|+....|.++ ...+|.++|+|++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 4555555444443 67778899999999999999999999999998888664 234577899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+..+. .+|+.|.+|..+..+.|...... |....|+|++|+.++.+.++++|+++++++++.++..+.
T Consensus 80 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 151 (338)
T cd08254 80 VGDRVAVPAV-IPCGACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVL 151 (338)
T ss_pred CCCEEEECCC-CCCCCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHH
Confidence 9999987775 49999999999999998554221 334679999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc-
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM- 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~- 245 (361)
+||+++.....++++++|||.|+|.+|++++++|+.+|++|+++++++++...+ +++|.+.+++..+.. .+....
T Consensus 152 ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd08254 152 TPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLG 230 (338)
T ss_pred HHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcC
Confidence 999999888888999999998889999999999999999999998888776555 889998887765432 221222
Q ss_pred CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee
Q 018094 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~ 325 (361)
.++|++||+.|....+..++++|+++|+++.+|.......++...++.++.++.+++....+.+..+++++.++.+.+.+
T Consensus 231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~ 310 (338)
T cd08254 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQV 310 (338)
T ss_pred CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcccc
Confidence 37999999998776688999999999999999876555556667778899999998877788899999999999988667
Q ss_pred EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 326 EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.+++++++++++.+.+++..||+|+++
T Consensus 311 ~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 311 ETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred eeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 8999999999999999999999999874
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-40 Score=308.28 Aligned_cols=327 Identities=25% Similarity=0.280 Sum_probs=264.0
Q ss_pred CCCCCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 20 DTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
++++.++.+++|.|.+ +++|++||+.++++|++|++...|.++ ..+|.++|||++|+|+++|+++..+++||+|++.+
T Consensus 7 ~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 85 (375)
T cd08282 7 GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPF 85 (375)
T ss_pred ecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeC
Confidence 4567888999999996 799999999999999999999988665 34688999999999999999999999999996654
Q ss_pred ccCCCCCCcccccCCCCCCcccccccccc---cCCCcccCCccceEEEeccC--ceEECCCCCCcc---cccccchhhhh
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVIMTYANK---YHDGTITYGGYSDIMVADEH--FVVRIPEGTPLD---ATAPLLCAGIT 170 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~---~aa~l~~~~~~ 170 (361)
...|+.|..|.++..+.|.+....+.+. +.......|+|++|+.++.. .++++|++++++ +++.+.+.+.+
T Consensus 86 -~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~t 164 (375)
T cd08282 86 -NVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPT 164 (375)
T ss_pred -CCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHH
Confidence 4579999999999999998743221110 11111236999999999975 899999999998 56788888999
Q ss_pred hhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG 246 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 246 (361)
||+++ ....+++|++|+|.|+|.+|++++|+|+++|+ +|+++++++++ .++++++|+. .+++.+.+ .+.++++
T Consensus 165 a~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~-~~~~~~~g~~-~v~~~~~~~~~~i~~~~~ 241 (375)
T cd08282 165 GWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPER-LDLAESIGAI-PIDFSDGDPVEQILGLEP 241 (375)
T ss_pred HHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHH-HHHHHHcCCe-EeccCcccHHHHHHHhhC
Confidence 99998 56778999999998889999999999999998 78887666655 4666889984 45655433 3334333
Q ss_pred -CccEEEEcCCCcc-----------cHHHHHHhhccCCEEEEecCCCC-------------CcccChHHHhhCCcEEEec
Q 018094 247 -TMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLVGAPEK-------------PLELPAFSLLMGRKIVGGS 301 (361)
Q Consensus 247 -g~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~-------------~~~~~~~~~~~~~~~i~g~ 301 (361)
++|++|||+|+.. ++..++++++++|+++.+|.... ...++...+..++..+.+.
T Consensus 242 ~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (375)
T cd08282 242 GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTG 321 (375)
T ss_pred CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEe
Confidence 7999999999763 37889999999999998876431 1234555667788888877
Q ss_pred ccCCHHHHHHHHHHHHcCCCce---eeEEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 302 MIGGMKETQEMIDFAAKHNIRA---DIEVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 302 ~~~~~~~~~~~~~~l~~~~l~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
.....+.+..+++++.++++++ ..+++++++++++++.+.+++ .+|+|++
T Consensus 322 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 322 QAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred cCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 6666677889999999999986 339999999999999999988 8999975
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=303.81 Aligned_cols=313 Identities=32% Similarity=0.519 Sum_probs=267.2
Q ss_pred CccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCC
Q 018094 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSC 103 (361)
Q Consensus 24 ~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c 103 (361)
.+++.+.+.|.+.++||+||+.++++|++|++...|.++...+|.++|||++|+|+.+|+++.++++||+|++.+....|
T Consensus 16 ~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 95 (329)
T cd08298 16 PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTC 95 (329)
T ss_pred CceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCC
Confidence 57777888888999999999999999999999988876655678899999999999999999999999999887777799
Q ss_pred CCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCC
Q 018094 104 RSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKP 183 (361)
Q Consensus 104 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 183 (361)
++|.+|.++..++|....+. +....|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++ ..+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~ 167 (329)
T cd08298 96 GECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKP 167 (329)
T ss_pred CCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCC
Confidence 99999999999999875432 223468999999999999999999999999999999999999998 6788899
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
++++||+|+|.+|++++++++..|++|++++++++++..+ +++|++.+++.... ...++|+++++.+....+..
T Consensus 168 ~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~ 241 (329)
T cd08298 168 GQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPA 241 (329)
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHH
Confidence 9999999999999999999999999999999888776555 88999877765432 12379999998776666899
Q ss_pred HHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeEEEecccHHHHHHHHHc
Q 018094 264 LIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAK 342 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~~~~l~~~~~a~~~~~~ 342 (361)
++++++++|+++.+|...... .++... +.++..+.++.....+.++.+++++.++.+++.++.|+++++++|++.+++
T Consensus 242 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~~~~ 320 (329)
T cd08298 242 ALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANEALQDLKE 320 (329)
T ss_pred HHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHHHHc
Confidence 999999999999988543222 233333 457778888877777889999999999988876689999999999999999
Q ss_pred CCCcEEEEE
Q 018094 343 ADVRYRFVI 351 (361)
Q Consensus 343 ~~~~gkvvi 351 (361)
++..||+++
T Consensus 321 ~~~~~~~v~ 329 (329)
T cd08298 321 GRIRGAAVL 329 (329)
T ss_pred CCCcceeeC
Confidence 998899874
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=304.96 Aligned_cols=331 Identities=24% Similarity=0.350 Sum_probs=270.5
Q ss_pred cccceecccCCCCCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++. .++.++++++|.|+| .++||+||++++++|++|++.+.|.++...+|.++|||++|+|+++|+++.+++
T Consensus 1 m~a~~~~---~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYH---GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEe---cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccC
Confidence 3444442 445688889999986 899999999999999999999988766555678999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCcccccccchh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~~aa~l~~~ 167 (361)
+||+|++.+.. .|++|++|..+.++.|....+. .+....|+|++|+.++.+ .++++|++++..+++.+++.
T Consensus 78 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~ 150 (345)
T cd08286 78 VGDRVLISCIS-SCGTCGYCRKGLYSHCESGGWI------LGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDI 150 (345)
T ss_pred CCCEEEECCcC-CCCCChHHHCcCcccCCCcccc------cccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccch
Confidence 99999766544 8999999999999999875331 123456999999999987 89999999999999999999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHH
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA 243 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~ 243 (361)
+.+||.++.....+.++++|||.|+|.+|++++|+|+.+| .+|+++.+.+++ ..+++++|++.++++.+.+ .+.+
T Consensus 151 ~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~i~~ 229 (345)
T cd08286 151 LPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNR-LEVAKKLGATHTVNSAKGDAIEQVLE 229 (345)
T ss_pred hHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHH-HHHHHHhCCCceeccccccHHHHHHH
Confidence 9999988777777899999999988999999999999999 688886665555 4566889998888876543 2333
Q ss_pred hcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCC
Q 018094 244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321 (361)
Q Consensus 244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l 321 (361)
.+. ++|++||++|....+..++++++++|+++.+|.......++...++.+++++.+.... .+.+..++++++++.+
T Consensus 230 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l 308 (345)
T cd08286 230 LTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVD-TNTTPMLLKLVSSGKL 308 (345)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCc-hhhHHHHHHHHHcCCC
Confidence 333 6999999998766688888999999999999976544556666667789999875432 3568889999999988
Q ss_pred cee---eEEEecccHHHHHHHHHcCC--CcEEEEEEe
Q 018094 322 RAD---IEVIPADYVNTALERLAKAD--VRYRFVIDV 353 (361)
Q Consensus 322 ~~~---~~~~~l~~~~~a~~~~~~~~--~~gkvvi~~ 353 (361)
++. .+++++++++++++.+.+.. ...|++|++
T Consensus 309 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 309 DPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 752 38999999999999998764 346998864
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-40 Score=302.25 Aligned_cols=328 Identities=28% Similarity=0.427 Sum_probs=273.1
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++. ..++.+.+.++|.|.+.+++|+|+++++++|+.|++...|.++....|.++|||++|+|+++|++++++++
T Consensus 1 m~a~~~~--~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILH--KPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEe--cCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCC
Confidence 3444543 23567888899999999999999999999999999998886665566789999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|++..+. .|+.|.+|..+.+++|.+... .|....|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 150 (332)
T cd08259 79 GDRVILYYYI-PCGKCEYCLSGEENLCRNRAE-------YGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGT 150 (332)
T ss_pred CCEEEECCCC-CCcCChhhhCCCcccCCCccc-------cccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHH
Confidence 9999776554 799999999999999987511 13345799999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-HHHHHHhcCCc
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGTM 248 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~g~ 248 (361)
||++++. ..+.+++++||+|+ |.+|++++++++..|++|+++++++++...+ ++++.+.+++..+ .+.+.+. .++
T Consensus 151 a~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~ 227 (332)
T cd08259 151 AVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGA 227 (332)
T ss_pred HHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCC
Confidence 9999987 77899999999997 9999999999999999999999887765444 7788877776543 1222222 379
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-E
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-E 326 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~ 326 (361)
|++|+++|... ...++++++++|+++.+|...... .+.......++.++.++.....++++.+++++.++.+++.+ +
T Consensus 228 d~v~~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 306 (332)
T cd08259 228 DVVIELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDR 306 (332)
T ss_pred CEEEECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeE
Confidence 99999999876 888999999999999998754332 23444444678888887666778899999999999988666 8
Q ss_pred EEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 327 VIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++++++++++|+.+.+++..||++++
T Consensus 307 ~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 307 VVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred EEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 99999999999999999888999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=302.47 Aligned_cols=320 Identities=26% Similarity=0.391 Sum_probs=267.2
Q ss_pred CCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018094 22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVG 101 (361)
Q Consensus 22 ~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~ 101 (361)
++.+.+.++|.|.+.+++++||+.++++|+.|+....+.++...+|.++|+|++|+|+.+|+++++|++||+|+... .+
T Consensus 9 ~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~-~~ 87 (337)
T cd08261 9 PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDP-YI 87 (337)
T ss_pred CCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEECC-CC
Confidence 45688889999999999999999999999999999888665555678899999999999999999999999997654 44
Q ss_pred CCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCC
Q 018094 102 SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD 181 (361)
Q Consensus 102 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 181 (361)
+|+.|..|..+.++.|.+... .+....|+|++|+.++++ ++++|+++++++++.+ ..+.++++++ ....+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l 157 (337)
T cd08261 88 SCGECYACRKGRPNCCENLQV-------LGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGV 157 (337)
T ss_pred CCCCChhhhCcCcccCCCCCe-------eeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCC
Confidence 999999999999999964321 112246899999999999 9999999999999876 4667888887 56778
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH---HHHHHhcC--CccEEEEcCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--g~d~vid~~g 256 (361)
.++++|||+|+|.+|++++|+|+.+|.+|+++++++++.. .++++|+++++++.+. +.+.+..+ ++|++||+.|
T Consensus 158 ~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~-~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g 236 (337)
T cd08261 158 TAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLE-FARELGADDTINVGDEDVAARLRELTDGEGADVVIDATG 236 (337)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHH-HHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCC
Confidence 9999999998899999999999999999999988876665 4488999999887654 33444433 6999999998
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCce--ee-EEEecccH
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA--DI-EVIPADYV 333 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~ 333 (361)
+...+..++++++++|+++.+|.......++...+..+++++.+......+.++.+++++.++.+++ .. ..++++++
T Consensus 237 ~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~ 316 (337)
T cd08261 237 NPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDV 316 (337)
T ss_pred CHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHH
Confidence 7666888999999999999998765444555556677888888876556677899999999999987 44 89999999
Q ss_pred HHHHHHHHcCC-CcEEEEEEe
Q 018094 334 NTALERLAKAD-VRYRFVIDV 353 (361)
Q Consensus 334 ~~a~~~~~~~~-~~gkvvi~~ 353 (361)
+++++.+.+++ ..+|+|+++
T Consensus 317 ~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 317 PEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHhcCCCceEEEEEeC
Confidence 99999999884 679999864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=280.10 Aligned_cols=317 Identities=22% Similarity=0.273 Sum_probs=269.0
Q ss_pred CCCCcccccccceecccCCC-CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEE
Q 018094 3 QAPEQEHPKNAFGWAARDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTE 80 (361)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~ 80 (361)
++.+++...++++|+..+.| +.++++++++|.....+|+||.+|+.|||+|+..++|-|+- +.+|.+-|.|++|+|+.
T Consensus 12 sa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~ 91 (354)
T KOG0025|consen 12 SASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVA 91 (354)
T ss_pred cccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEE
Confidence 46778888999999988776 56889999999998889999999999999999999998874 47899999999999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccc
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA 160 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~ 160 (361)
||+++.+|++||.|+... ...|+|++|.+.+++.++++++.++.+.
T Consensus 92 vGs~vkgfk~Gd~VIp~~----------------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~ 137 (354)
T KOG0025|consen 92 VGSNVKGFKPGDWVIPLS----------------------------------ANLGTWRTEAVFSESDLIKVDKDIPLAS 137 (354)
T ss_pred ecCCcCccCCCCeEeecC----------------------------------CCCccceeeEeecccceEEcCCcCChhh
Confidence 999999999999997422 4569999999999999999999999999
Q ss_pred ccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcEEecCC
Q 018094 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSFLVSR 236 (361)
Q Consensus 161 aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~v~~~~ 236 (361)
||++.+...|||.+|.+.-.+++||+|+-.|+ +.+|++.+|+||++|.+-+-++++.+..+++ ++.+|+++||...
T Consensus 138 AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTee 217 (354)
T KOG0025|consen 138 AATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEE 217 (354)
T ss_pred hheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHH
Confidence 99999999999999999999999999999998 9999999999999999888888887654444 4568999998754
Q ss_pred CHH--HHHHh---cCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC-CCcccChHHHhhCCcEEEecccCCH----
Q 018094 237 DQD--EMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGM---- 306 (361)
Q Consensus 237 ~~~--~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---- 306 (361)
+.. ...+. ..++.+.|||+|+.+ .....+.|.+||+.+.+|..+ .+..++...+++|.++++|++....
T Consensus 218 el~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~ 296 (354)
T KOG0025|consen 218 ELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEH 296 (354)
T ss_pred HhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhcc
Confidence 321 11222 237999999999987 667888999999999998766 4679999999999999999987432
Q ss_pred -------HHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCC-cEEEEEEeC
Q 018094 307 -------KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADV-RYRFVIDVA 354 (361)
Q Consensus 307 -------~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~-~gkvvi~~~ 354 (361)
+.+.++.+++..|+|+.+. ...+|++...|++...+... .||-++.++
T Consensus 297 ~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 297 KSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred CCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 3356778889999999776 88999999998886544333 367777664
|
|
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=304.44 Aligned_cols=327 Identities=21% Similarity=0.320 Sum_probs=259.3
Q ss_pred eecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCC---CCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 018094 15 GWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEW---GNAIYPIVPGHEIVGVVTEVGSKVSKFKVG 91 (361)
Q Consensus 15 ~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~~~~~~~G 91 (361)
+|.+...++.+++.++|.|.+.++||+||++++++|++|++++.+.. ....+|.++|||++|+|+++|+++..+++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~G 82 (341)
T PRK05396 3 ALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVG 82 (341)
T ss_pred eEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCC
Confidence 33344455679999999999999999999999999999998766531 122467789999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhh
Q 018094 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV 171 (361)
Q Consensus 92 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a 171 (361)
|+|+..+.+ .|++|++|..+.+++|++..+. +...+|+|++|+.++.+.++++|+++++++++.+ ..+.++
T Consensus 83 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~ 153 (341)
T PRK05396 83 DRVSGEGHI-VCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNA 153 (341)
T ss_pred CEEEECCCC-CCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHH
Confidence 999877655 8999999999999999764211 2335799999999999999999999998888744 455555
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc--
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM-- 245 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~-- 245 (361)
++++.. ...+|++|+|.|+|.+|++++|+|+.+|+ +++++++++++ .++++++|+++++++++.+ .+.+.+
T Consensus 154 ~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 230 (341)
T PRK05396 154 VHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYR-LELARKMGATRAVNVAKEDLRDVMAELGMT 230 (341)
T ss_pred HHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH-HHHHHHhCCcEEecCccccHHHHHHHhcCC
Confidence 555433 23689999998889999999999999999 57777555555 4666899999988876543 344444
Q ss_pred CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC-HHHHHHHHHHHHcC-CCce
Q 018094 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-MKETQEMIDFAAKH-NIRA 323 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~~l~~~-~l~~ 323 (361)
.++|++|||.|+...+..++++++++|+++.+|..+....++...+..+++++.++.... .+.+..+++++.++ ++.+
T Consensus 231 ~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (341)
T PRK05396 231 EGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLSP 310 (341)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChhH
Confidence 379999999998777899999999999999999766555555566778888888865322 23456788889888 4444
Q ss_pred ee-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 324 DI-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 324 ~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
.+ +.+++++++++|+.+.+++ .||++++++
T Consensus 311 ~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 311 IITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred heEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 44 8999999999999998877 799999764
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=304.79 Aligned_cols=301 Identities=20% Similarity=0.195 Sum_probs=243.1
Q ss_pred ccceecccCCCCCccceeeec----cCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccc--cEEEEEeCCC
Q 018094 12 NAFGWAARDTSGVLSPFHFSR----RATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEI--VGVVTEVGSK 84 (361)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~----p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~--~G~V~~vG~~ 84 (361)
+++.+.. .+++.|++.+.+. |+|+++||||||++++||+.|++...|.+.. ..+|.++|++. .|++..+|+.
T Consensus 9 ~~~~~~~-~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 9 KAYVTGF-PKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred ecCCCCC-CCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 4444333 2356788888877 8899999999999999999999988875432 35678899754 5666668888
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEecc-CceEECC-CCCCcc-cc
Q 018094 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIP-EGTPLD-AT 161 (361)
Q Consensus 85 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~v~~iP-~~~~~~-~a 161 (361)
++.|++||+|+. .|+|+||+.+|+ ..++++| ++++++ ++
T Consensus 88 v~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~a 129 (338)
T cd08295 88 NPDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYL 129 (338)
T ss_pred CCCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHH
Confidence 889999999962 268999999999 7999995 678877 78
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH-cCCcEEecCCCH-
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER-LGADSFLVSRDQ- 238 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~-~g~~~v~~~~~~- 238 (361)
+++++++.|||+++.....+++|++|||+|+ |.+|++++|+||.+|++|+++++++++...+ ++ +|+++++++.+.
T Consensus 130 a~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~-~~~lGa~~vi~~~~~~ 208 (338)
T cd08295 130 GLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL-KNKLGFDDAFNYKEEP 208 (338)
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhcCCceeEEcCCcc
Confidence 8999999999999988888999999999997 9999999999999999999988887776555 55 999998886432
Q ss_pred H---HHHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-c-----ccChHHHhhCCcEEEecccCCH--
Q 018094 239 D---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-L-----ELPAFSLLMGRKIVGGSMIGGM-- 306 (361)
Q Consensus 239 ~---~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~i~g~~~~~~-- 306 (361)
+ .+.+.+ +++|++||++|+. .+..++++++++|+++.+|..... . ..+...++.+++++.++.....
T Consensus 209 ~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 287 (338)
T cd08295 209 DLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLH 287 (338)
T ss_pred cHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHH
Confidence 2 334443 3899999999985 489999999999999999865432 1 1234556778888888654332
Q ss_pred ---HHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 307 ---KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 307 ---~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.++++++++.++++++.. ..|+++++++|++.+++++..||+|+++
T Consensus 288 ~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 288 RYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 3467889999999998766 7899999999999999999899999874
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=305.48 Aligned_cols=337 Identities=26% Similarity=0.427 Sum_probs=274.1
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCC---
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSK--- 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~--- 87 (361)
|+++++... ...+++.++|.|.+.++||+||+.++++|++|+....+.++. .+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~a~~~~~~--~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGP--NPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecC--CCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCc
Confidence 455555332 245788899999999999999999999999999988886653 56789999999999999999988
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccc-ccc-ccC-------------CCcccCCccceEEEeccCceEEC
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YAN-KYH-------------DGTITYGGYSDIMVADEHFVVRI 152 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~-~~~-------------~~~~~~g~~~~~~~v~~~~v~~i 152 (361)
|++||+|+..+ ...|+.|.+|..+.+++|+...++ +.+ ... ......|+|++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSF-IMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcC-CCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 99999997654 459999999999999999975311 000 000 00124689999999999999999
Q ss_pred CCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcE
Q 018094 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADS 231 (361)
Q Consensus 153 P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~ 231 (361)
|+++++.+++.+++.+.+||+++.....+.++++|||+|+|.+|++++++|+.+|++ ++++++++++. ++++++|++.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~-~~~~~~g~~~ 235 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKL-AKAKELGATH 235 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCce
Confidence 999999999999999999999998888889999999998899999999999999997 77777776665 4558899998
Q ss_pred EecCCCHH---HHHHhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccC
Q 018094 232 FLVSRDQD---EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG 304 (361)
Q Consensus 232 v~~~~~~~---~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~ 304 (361)
+++.++.+ .+.+.. .++|++||++++......++++++++|+++.+|.... ...++...++.+++++.++...
T Consensus 236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 88876543 333443 3699999999987348899999999999999986543 2345555666788888886543
Q ss_pred C-HHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 305 G-MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 305 ~-~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
. .+.++.+++++.++++++. + +.++++++.++++.+++++..||+|++
T Consensus 316 ~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 3 3678999999999998863 3 789999999999999999988999974
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=301.78 Aligned_cols=327 Identities=22% Similarity=0.279 Sum_probs=264.1
Q ss_pred cccceecccCCCCCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.| .+++.+++.++|.|.| .++||+||+.++++|++|++...|.++. ..|.++|||++|+|+++|+++.+++
T Consensus 1 m~~~~~---~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVI---HGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEE---ecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccC
Confidence 445555 2456788999999996 8999999999999999999988876543 4578999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCccccc-----
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATA----- 162 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~~aa----- 162 (361)
+||+|++. +...|++|..|..|..+.|.+..+. +....|+|++|+.++.. .++++|++++++.+.
T Consensus 77 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~ 148 (345)
T cd08287 77 PGDFVIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLL 148 (345)
T ss_pred CCCEEEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhH
Confidence 99999763 4457999999999999999864321 23467999999999975 999999999882221
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHH--
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD-- 239 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~-- 239 (361)
++...+.+||+++. ...+++|++|+|.|+|.+|++++|+|+.+|++ ++++.+++ .+.++++++|++.++++.+.+
T Consensus 149 ~l~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~-~~~~~~~~~ga~~v~~~~~~~~~ 226 (345)
T cd08287 149 ALSDVMGTGHHAAV-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHE-DRQALAREFGATDIVAERGEEAV 226 (345)
T ss_pred hhhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH-HHHHHHHHcCCceEecCCcccHH
Confidence 22356788898885 55689999999988899999999999999996 55555554 445677899999999886643
Q ss_pred -HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHH
Q 018094 240 -EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFA 316 (361)
Q Consensus 240 -~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l 316 (361)
.+.++.+ ++|++||++|+...+..++++++++|+++.+|.......++....+.+++++.+......+.++++++++
T Consensus 227 ~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (345)
T cd08287 227 ARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDV 306 (345)
T ss_pred HHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHH
Confidence 3444443 6999999998866689999999999999999876544555654567799999887666677899999999
Q ss_pred HcCCCce---eeEEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 317 AKHNIRA---DIEVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 317 ~~~~l~~---~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
.++++++ ..+.+++++++++++.+.+++. .|++|+
T Consensus 307 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 307 LAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred HcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence 9999886 2388999999999999887665 499885
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=302.99 Aligned_cols=321 Identities=23% Similarity=0.342 Sum_probs=253.8
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG---NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~ 97 (361)
.++.+++.+++.|.+.++||+||++++++|++|++...+... ...+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (364)
T PLN02702 25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE 104 (364)
T ss_pred cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence 456688888888999999999999999999999998876321 11357789999999999999999999999999877
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHh
Q 018094 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177 (361)
Q Consensus 98 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~ 177 (361)
+.+ .|++|..|.+|.++.|+...+. + .....|+|++|+.++...++++|+++++++++.. ....++|+++ .
T Consensus 105 ~~~-~~~~c~~c~~g~~~~c~~~~~~--~----~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~ 175 (364)
T PLN02702 105 PGI-SCWRCNLCKEGRYNLCPEMKFF--A----TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R 175 (364)
T ss_pred CCC-CCCCCcchhCcCcccCCCcccc--C----CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 665 8999999999999999863211 1 1124699999999999999999999999888742 2344577777 5
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCC--CH---HHHHHh---c-CC
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSR--DQ---DEMQAA---M-GT 247 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~--~~---~~~~~~---~-~g 247 (361)
...+.++++|||+|+|.+|++++|+|+.+|++ +++++++ +.+.++++++|++.++++. .. +.+.++ . ++
T Consensus 176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (364)
T PLN02702 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVD-DERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGG 254 (364)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC-HHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence 56688999999998899999999999999996 4555445 4445667899998876542 22 223222 2 37
Q ss_pred ccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc--eee
Q 018094 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--ADI 325 (361)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~--~~~ 325 (361)
+|++||++|+...+..++++++++|+++.+|.......+....+..+++++.+++.. ...++.+++++.++++. +.+
T Consensus 255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 333 (364)
T PLN02702 255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRY-RNTWPLCLEFLRSGKIDVKPLI 333 (364)
T ss_pred CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccC-hHHHHHHHHHHHcCCCCchHhe
Confidence 999999999766689999999999999999865444444556677899999987653 45788899999999875 223
Q ss_pred -EEEec--ccHHHHHHHHHcCCCcEEEEEE
Q 018094 326 -EVIPA--DYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 326 -~~~~l--~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++|++ +++++|++.+.+++..+|+++.
T Consensus 334 ~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 334 THRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred EEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 77665 7999999999988888999985
|
|
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=298.35 Aligned_cols=262 Identities=24% Similarity=0.321 Sum_probs=215.6
Q ss_pred cccccccEEEEEeCCCCC------CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEE
Q 018094 69 VPGHEIVGVVTEVGSKVS------KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIM 142 (361)
Q Consensus 69 ~lG~e~~G~V~~vG~~~~------~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 142 (361)
++|||++|+|+++|++|+ +|++||||++.+.. .|++|.+|+.|.++.|++..+........+...+|+|+||+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~ 79 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHC 79 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeE
Confidence 589999999999999999 89999999877655 79999999999999998864321111111223579999999
Q ss_pred EeccC-ceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhH
Q 018094 143 VADEH-FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 220 (361)
Q Consensus 143 ~v~~~-~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~ 220 (361)
.+|+. +++++|+++++++++++++...|+|++++... ..++++|||+|+|++|++++|+||.+|++ |+++++++++
T Consensus 80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r- 157 (280)
T TIGR03366 80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAG-DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDR- 157 (280)
T ss_pred EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhcc-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHH-
Confidence 99997 79999999999999999999999999987765 46999999999999999999999999996 7777655555
Q ss_pred HHHHHHcCCcEEecCCCH-HHHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC--CCcccChHHHhhCC
Q 018094 221 SEAIERLGADSFLVSRDQ-DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE--KPLELPAFSLLMGR 295 (361)
Q Consensus 221 ~~~~~~~g~~~v~~~~~~-~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 295 (361)
.++++++|++.+++..+. +.+.+++. ++|++||++|...++..++++++++|+++.+|... ....++...++.|+
T Consensus 158 ~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~ 237 (280)
T TIGR03366 158 RELALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW 237 (280)
T ss_pred HHHHHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence 567799999988876543 33444443 79999999998877899999999999999999753 34577788889999
Q ss_pred cEEEecccCCHHHHHHHHHHHHcC--CCce--ee-EEEecccH
Q 018094 296 KIVGGSMIGGMKETQEMIDFAAKH--NIRA--DI-EVIPADYV 333 (361)
Q Consensus 296 ~~i~g~~~~~~~~~~~~~~~l~~~--~l~~--~~-~~~~l~~~ 333 (361)
+++.|+...+.++++++++++.++ ++.. .+ ++|+++++
T Consensus 238 ~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 238 LTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 999999988888999999999985 4432 23 88998763
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=300.85 Aligned_cols=323 Identities=23% Similarity=0.294 Sum_probs=263.8
Q ss_pred CCCCccceeeeccCCC-CCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018094 21 TSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~-~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 99 (361)
+++.+.++++|+|.|. +++|+||+.++++|+.|++...|.++ ..+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus 8 ~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 86 (344)
T cd08284 8 GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFT 86 (344)
T ss_pred cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCCCEEEEccc
Confidence 4467889999999985 99999999999999999998887665 345788999999999999999999999999987765
Q ss_pred cCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCcccccccchhhhhhhHHHHh
Q 018094 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCAGITVYSPLRF 177 (361)
Q Consensus 100 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~ 177 (361)
. .|++|.+|.++.+.+|++...... .......|+|++|+.++.. .++++|+++++++++.+++.+.+||+++..
T Consensus 87 ~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~ 162 (344)
T cd08284 87 I-ACGECFYCRRGQSGRCAKGGLFGY---AGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR 162 (344)
T ss_pred C-CCCCChHHhCcCcccCCCCccccc---cccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHh
Confidence 4 799999999999999987522100 0111246999999999864 999999999999999999999999999976
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCH---HHHHHhcC--CccEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEMQAAMG--TMDGI 251 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--g~d~v 251 (361)
..+.++++|||+|+|.+|++++++|+.+|+ +++++++.+++. ++++++|+.. ++.... ..+.++.+ ++|++
T Consensus 163 -~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~-~~~~~~g~~~-~~~~~~~~~~~l~~~~~~~~~dvv 239 (344)
T cd08284 163 -AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERL-ERAAALGAEP-INFEDAEPVERVREATEGRGADVV 239 (344)
T ss_pred -cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHHHhCCeE-EecCCcCHHHHHHHHhCCCCCCEE
Confidence 667899999999889999999999999997 888886665554 5567899753 444433 33444443 79999
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCce---eeEE
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA---DIEV 327 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~---~~~~ 327 (361)
||++++...+..++++++++|+++.+|.... .........+.+++++.+......+.++.+++++.++++++ ..+.
T Consensus 240 id~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 319 (344)
T cd08284 240 LEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHR 319 (344)
T ss_pred EECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEeee
Confidence 9999986668899999999999999997652 33444555667888887655556678999999999998875 2388
Q ss_pred EecccHHHHHHHHHcCCCcEEEEEE
Q 018094 328 IPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 328 ~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+++++++++++.+.+++. +|+|++
T Consensus 320 ~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 320 MPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred ecHHHHHHHHHHHhcCCc-eEEEec
Confidence 999999999999988887 999974
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=299.78 Aligned_cols=314 Identities=21% Similarity=0.311 Sum_probs=256.3
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.+. .++.+.+.++|.|++++++|+||+.++++|++|+....|.++ +|.++|||++|+|+++|++ +++
T Consensus 1 ~~a~~~~---~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLD---GGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEe---CCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCC
Confidence 3455553 356788999999999999999999999999999998887553 5778999999999999998 689
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCc-ccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
||||...+.. +|++|.+|.+|.++.|...... +. ...|+|++|+.++.+.++++|++++.++++.+ ....
T Consensus 72 G~~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~ 142 (319)
T cd08242 72 GKRVVGEINI-ACGRCEYCRRGLYTHCPNRTVL-------GIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLA 142 (319)
T ss_pred CCeEEECCCc-CCCCChhhhCcCcccCCCCccc-------CccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHH
Confidence 9999665554 7999999999999988864321 11 24689999999999999999999999888753 3444
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
++|..+ ....++++++|||+|+|.+|++++|+|+.+|++|++++++++++. .++++|++.++++... ....++|
T Consensus 143 ~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~-~~~~~g~~~~~~~~~~----~~~~~~d 216 (319)
T cd08242 143 AALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLA-LARRLGVETVLPDEAE----SEGGGFD 216 (319)
T ss_pred HHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHH-HHHHcCCcEEeCcccc----ccCCCCC
Confidence 666655 556789999999998899999999999999999999888877764 4577999887776432 1123799
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc--eee-E
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--ADI-E 326 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~--~~~-~ 326 (361)
++||++|+...+..++++++++|+++..+.......++...++.++.++.++.... ++.+++++.+++++ +.+ +
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~l~~~~~~~~ 293 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGP---FAPALRLLRKGLVDVDPLITA 293 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEeccc---HHHHHHHHHcCCCChhhceEE
Confidence 99999998666889999999999999987655555666667778999998886543 77889999999984 434 8
Q ss_pred EEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 327 VIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+|+++++++||+.+.++. .+|+|++
T Consensus 294 ~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 294 VYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred EEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 999999999999998776 5899886
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=306.90 Aligned_cols=317 Identities=23% Similarity=0.358 Sum_probs=257.9
Q ss_pred CccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCC------C-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018094 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEW------G-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 24 ~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
.++++++|.|++++++|+||+.++++|++|++...+.. + ...+|.++|||++|+|+++|+++++|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 58889999999999999999999999999998876321 1 1345789999999999999999999999999988
Q ss_pred ccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCC-------Ccccccccchhhh
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT-------PLDATAPLLCAGI 169 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~-------~~~~aa~l~~~~~ 169 (361)
.+.. +|+.|..|..|.+++|.+... .|....|+|++|+.++++.++++|+++ +.+ +++++.++.
T Consensus 118 ~~~~-~~~~~~~c~~~~~~~~~~~~~-------~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ 188 (384)
T cd08265 118 EEMM-WCGMCRACRSGSPNHCKNLKE-------LGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS 188 (384)
T ss_pred CCCC-CCCCChhhhCcCcccCCCcce-------eeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence 8765 999999999999999986431 123347999999999999999999864 344 556677888
Q ss_pred hhhHHHHhh-CCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCH------HHH
Q 018094 170 TVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQ------DEM 241 (361)
Q Consensus 170 ~a~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~------~~~ 241 (361)
+||+++... ..+++|++|||+|+|.+|++++++|+.+|+ +|+++++.+++ .++++++|+++++++.+. +.+
T Consensus 189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~-~~~~~~~g~~~~v~~~~~~~~~~~~~v 267 (384)
T cd08265 189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEER-RNLAKEMGADYVFNPTKMRDCLSGEKV 267 (384)
T ss_pred HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH-HHHHHHcCCCEEEcccccccccHHHHH
Confidence 999998665 678999999999889999999999999999 78888777764 577789999888876532 234
Q ss_pred HHhcC--CccEEEEcCCCc-ccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccC-CHHHHHHHHHHHH
Q 018094 242 QAAMG--TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG-GMKETQEMIDFAA 317 (361)
Q Consensus 242 ~~~~~--g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~l~ 317 (361)
.++++ ++|+|+|+.|+. ..+..++++++++|+++.+|.......+....+..+..++.++... ....+.++++++.
T Consensus 268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~ 347 (384)
T cd08265 268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMA 347 (384)
T ss_pred HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHH
Confidence 44443 699999999973 3478899999999999999876544445555666778888887542 3346889999999
Q ss_pred cCCCcee---eEEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 318 KHNIRAD---IEVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 318 ~~~l~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
++.+++. .+.|+++++++|++.+.++ ..||+|+
T Consensus 348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 348 SGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred cCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 9998863 3889999999999997665 4688875
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-39 Score=299.30 Aligned_cols=333 Identities=24% Similarity=0.328 Sum_probs=276.3
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+.++.+++.+.+.|.+.+++|+||+.++++|++|++.+.|.+.. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 34555543345566777788888899999999999999999999988775432 24577899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|++.+.. .|++|.+|.++.++.|++..+. |....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ 152 (342)
T cd08266 81 PGQRVVIYPGI-SCGRCEYCLAGRENLCAQYGIL-------GEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFL 152 (342)
T ss_pred CCCEEEEcccc-ccccchhhcccccccccccccc-------ccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHH
Confidence 99999876554 7999999999999999875321 334578999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (361)
+||+++.....++++++++|+|+ +.+|++++++++..|++|+++++++++...+ ++++.+.+++..+.+. +.+..
T Consensus 153 ~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (342)
T cd08266 153 TAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELT 231 (342)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHh
Confidence 99999888788899999999998 7999999999999999999998887776554 6788777776655433 33332
Q ss_pred --CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018094 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322 (361)
Q Consensus 246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~ 322 (361)
.++|++++++|... +..++++++++|+++.+|..... ..++....+.+++++.+........+..+++++.++.++
T Consensus 232 ~~~~~d~~i~~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 310 (342)
T cd08266 232 GKRGVDVVVEHVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLK 310 (342)
T ss_pred CCCCCcEEEECCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcc
Confidence 27999999999865 88899999999999999865432 344544556788999998888888899999999999888
Q ss_pred eee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 323 ADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.. +.|++++++++++.+.+++..+|+++++
T Consensus 311 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 311 PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 765 8999999999999999888889999863
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=302.27 Aligned_cols=323 Identities=22% Similarity=0.285 Sum_probs=259.5
Q ss_pred cccceecccCCCCCcccee-eeccCCCCCeEEEEEeeeccccchhhhhhCCCC--------------------CCCCCCc
Q 018094 11 KNAFGWAARDTSGVLSPFH-FSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG--------------------NAIYPIV 69 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~-~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 69 (361)
|+++.+...+.+..+.+.+ ++.|.+.+++|+||+.++++|++|++...|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 4555555444444555543 577888999999999999999999998876542 2346789
Q ss_pred ccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCce
Q 018094 70 PGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149 (361)
Q Consensus 70 lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v 149 (361)
+|||++|+|+++|+++++|++||+|++.+.. .|+.|..|.. |.. .+....|+|++|+.++...+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~----------~~~~~~g~~~~~~~v~~~~~ 144 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDY----------IGSERDGGFAEYTVVPAENA 144 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCc-CCCCcccccc-----ccc----------cCCCCCccceEEEEecHHHc
Confidence 9999999999999999999999999776544 5776655321 111 12224689999999999999
Q ss_pred EECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC
Q 018094 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228 (361)
Q Consensus 150 ~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g 228 (361)
+++|+++++++++.+++.+.+||+++ ....++++++|||+|+ |.+|++++++|+.+|++++.+++++ ++ +.++++|
T Consensus 145 ~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~-~~~~~~g 221 (350)
T cd08274 145 YPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KE-EAVRALG 221 (350)
T ss_pred eeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hh-HHHHhcC
Confidence 99999999999999999999999988 5567899999999998 9999999999999999998888664 44 4558899
Q ss_pred CcEEecCCCHHHH-HHhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccC
Q 018094 229 ADSFLVSRDQDEM-QAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIG 304 (361)
Q Consensus 229 ~~~v~~~~~~~~~-~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~ 304 (361)
++.+++....... ...+ .++|++||++|+.. +..++++++++|+++.+|..... ..++...++.+++++.++...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (350)
T cd08274 222 ADTVILRDAPLLADAKALGGEPVDVVADVVGGPL-FPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLG 300 (350)
T ss_pred CeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHH-HHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecC
Confidence 8766554332211 2223 37999999999864 89999999999999999865444 466777777899999998887
Q ss_pred CHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 305 GMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 305 ~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
..+.+.++++++.++++++.. +.+++++++++++.+.+++..||+++++
T Consensus 301 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 301 TREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 788899999999999988765 8999999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=298.92 Aligned_cols=309 Identities=24% Similarity=0.296 Sum_probs=250.3
Q ss_pred CccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC-----------CCCCCCcccccccEEEEEeCCCCCC-CCCC
Q 018094 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-----------NAIYPIVPGHEIVGVVTEVGSKVSK-FKVG 91 (361)
Q Consensus 24 ~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~lG~e~~G~V~~vG~~~~~-~~~G 91 (361)
.+++++++.|++.+++|+||+.++++|+.|++...|... ...+|.++|+|++|+|+++|+++++ |++|
T Consensus 10 ~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~G 89 (341)
T cd08262 10 PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVG 89 (341)
T ss_pred ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCC
Confidence 688889999999999999999999999999998877221 1235778999999999999999987 9999
Q ss_pred CEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhh
Q 018094 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV 171 (361)
Q Consensus 92 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a 171 (361)
|+|+..++ ..|+.|..|..|.. ....|+|++|+.++.+.++++|+++++++++ ++.++.+|
T Consensus 90 d~V~~~~~-~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a 150 (341)
T cd08262 90 TRVTSLPL-LLCGQGASCGIGLS-----------------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVG 150 (341)
T ss_pred CEEEecCC-cCCCCChhhhCCCC-----------------cCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHH
Confidence 99987766 58999999943211 1246899999999999999999999998876 66778899
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH------HHHhc
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE------MQAAM 245 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~------~~~~~ 245 (361)
|+++ ....++++++|||+|+|.+|.+++|+|+.+|++++++++..+...++++++|+++++++...+. +.+..
T Consensus 151 ~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~ 229 (341)
T cd08262 151 LHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARA 229 (341)
T ss_pred HHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHh
Confidence 9885 5677899999999988999999999999999975555554455556778999988888654321 12222
Q ss_pred --CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCce
Q 018094 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA 323 (361)
Q Consensus 246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~ 323 (361)
+++|++||++|+...+..++++++++|+++.+|.......+.......+++++.++...+.+.+.++++++.++.+.+
T Consensus 230 ~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 309 (341)
T cd08262 230 GGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDV 309 (341)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCCh
Confidence 269999999998545788999999999999998764333333333356788887776666778999999999999875
Q ss_pred e---eEEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 324 D---IEVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 324 ~---~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
. .+.+++++++++++.+.+++..||+|++
T Consensus 310 ~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 310 APMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 3 3899999999999999999988999974
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-39 Score=299.47 Aligned_cols=327 Identities=24% Similarity=0.367 Sum_probs=270.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.++ .++.+.+.+.+.|++.+++|+||++++++|+.|+....|.+.....|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~---~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLH---GPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEe---cCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCC
Confidence 3455553 3456888889999999999999999999999999988776533345678999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc-----eEECCCCCCcccccccc
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-----VVRIPEGTPLDATAPLL 165 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----v~~iP~~~~~~~aa~l~ 165 (361)
||+|+..+ ...|++|+.|.+++.++|.+..+. +....|+|++|+.++... ++++|+++++++|+.+
T Consensus 78 Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~- 148 (343)
T cd08235 78 GDRVFVAP-HVPCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV- 148 (343)
T ss_pred CCEEEEcc-CCCCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-
Confidence 99997765 458899999999999999875321 233579999999999988 9999999999998765
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHHH---H
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDE---M 241 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~ 241 (361)
..+.+||+++... .+++|++|||+|+|.+|++++|+|+..|++ |+++++++++...+ +++|.++++++++.+. +
T Consensus 149 ~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i 226 (343)
T cd08235 149 EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKV 226 (343)
T ss_pred hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHH
Confidence 7788999999765 789999999998899999999999999998 88777777776554 7899988888766443 3
Q ss_pred HHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC--cccChHHHhhCCcEEEecccCCHHHHHHHHHHHH
Q 018094 242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA 317 (361)
Q Consensus 242 ~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~ 317 (361)
.+..+ ++|++||++++...+...+++++++|+++.+|..... ..++...+..+++.+.++.....+.++.+++++.
T Consensus 227 ~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 306 (343)
T cd08235 227 RELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIA 306 (343)
T ss_pred HHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHH
Confidence 34443 6999999999765588899999999999999865432 3445566777899998887777788999999999
Q ss_pred cCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 318 KHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 318 ~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++++.+ .. ..+++++++++++.+.+++ .||+|+.
T Consensus 307 ~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 307 SGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred cCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 998863 23 7899999999999999999 8999873
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=299.16 Aligned_cols=304 Identities=22% Similarity=0.320 Sum_probs=252.7
Q ss_pred cccceecccCCC-CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC-CCCCCCcccccccEEEEEeCCCCCCC
Q 018094 11 KNAFGWAARDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 11 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
|+++++...+.| ..+++.++|.|.+.++||+||+.++++|++|++...|.++ ....|.++|||++|+|+++|+++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 455555433333 3578899999999999999999999999999998888654 23467899999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhh
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
++||+|++. ...|+|++|+.+++..++++|+++++++++.+++..
T Consensus 81 ~~Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~ 125 (324)
T cd08292 81 QVGQRVAVA-----------------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMP 125 (324)
T ss_pred CCCCEEEec-----------------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccH
Confidence 999999742 236899999999999999999999999999998888
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHh
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAA 244 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~ 244 (361)
.++|+++.. ..+++|++|||+|+ |.+|++++|+|+.+|+++++++++++++..+ +++|+++++++.+.+ .+.++
T Consensus 126 ~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~ 203 (324)
T cd08292 126 LSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RALGIGPVVSTEQPGWQDKVREA 203 (324)
T ss_pred HHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HhcCCCEEEcCCCchHHHHHHHH
Confidence 999998855 67899999999987 9999999999999999999999988887666 568998888876543 34444
Q ss_pred cC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCC----------HHHHHH
Q 018094 245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG----------MKETQE 311 (361)
Q Consensus 245 ~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----------~~~~~~ 311 (361)
++ ++|++||++|+.. ...++++++++|+++.+|.... ...++...++.+++++.++.... .+.+..
T Consensus 204 ~~~~~~d~v~d~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (324)
T cd08292 204 AGGAPISVALDSVGGKL-AGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAE 282 (324)
T ss_pred hCCCCCcEEEECCCChh-HHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHH
Confidence 44 7999999999865 8899999999999999987532 34455555667899988876532 245788
Q ss_pred HHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 312 MIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 312 ~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+++++.++.+++.+ +.|+++++++|++.+.+++..||++++
T Consensus 283 ~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 283 LLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 99999999998655 899999999999999988878999874
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=297.47 Aligned_cols=326 Identities=24% Similarity=0.354 Sum_probs=262.5
Q ss_pred CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhh-CCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018094 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIK-NEWGN--AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~-g~~~~--~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
.+++.+.+.++|.|.+.+++|+||+.++++|++|+.... +.+.. ..+|.++|||++|+|+++|+++++|++||+|++
T Consensus 4 ~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~ 83 (339)
T cd08232 4 HAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAV 83 (339)
T ss_pred ccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEE
Confidence 355778889999999999999999999999999988763 32211 135778999999999999999999999999976
Q ss_pred ccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHH
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 176 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~ 176 (361)
.+ .+.|++|.+|..|+.+.|.+..+..... . -....|+|++|+.++.+.++++|+++++++|+. ..++.++|+++.
T Consensus 84 ~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~-~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~ 159 (339)
T cd08232 84 NP-SRPCGTCDYCRAGRPNLCLNMRFLGSAM-R-FPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVN 159 (339)
T ss_pred cc-CCcCCCChHHhCcCcccCccccceeecc-c-cCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHH
Confidence 64 4589999999999999999853211100 0 012479999999999999999999999998875 567788999998
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc---CCccEEE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGII 252 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---~g~d~vi 252 (361)
....+ ++++|||.|+|.+|++++|+|+.+|+ +++++++++++. ++++++|+++++++++.+ ..+.. +++|++|
T Consensus 160 ~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~-~~~~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vl 236 (339)
T cd08232 160 RAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPL-AVARAMGADETVNLARDP-LAAYAADKGDFDVVF 236 (339)
T ss_pred hcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHcCCCEEEcCCchh-hhhhhccCCCccEEE
Confidence 77766 89999998889999999999999999 788887776655 467889998888876543 22222 3699999
Q ss_pred EcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--e-EEEe
Q 018094 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIP 329 (361)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~--~-~~~~ 329 (361)
|+.|+...+...+++|+++|+++.+|........+...++.+++++.+.... .+.++.+++++.++++++. + ++++
T Consensus 237 d~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~ 315 (339)
T cd08232 237 EASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRF-DDEFAEAVRLLAAGRIDVRPLITAVFP 315 (339)
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecC-HHHHHHHHHHHHcCCCCchhheeEEec
Confidence 9999765588999999999999999865433444445556788888877543 4568889999999988642 3 8899
Q ss_pred cccHHHHHHHHHcCCCcEEEEEEe
Q 018094 330 ADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 330 l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++++++.+.+++..||+|+++
T Consensus 316 ~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 316 LEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHHhCCCceeEEEeC
Confidence 999999999999888889999863
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=299.36 Aligned_cols=294 Identities=15% Similarity=0.118 Sum_probs=229.2
Q ss_pred CCCccceeeeccCCC-CCeEEEEEeeeccccchhhhhhCC---CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEc
Q 018094 22 SGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHLIKNE---WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97 (361)
Q Consensus 22 ~~~l~~~~~~~p~~~-~~~vlV~v~~~~i~~~D~~~~~g~---~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~ 97 (361)
++.+++.++|.|+|. ++||||||+++|||+.|....... .....+|.++|||++|+|+++|+++++|++||||+.
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~- 98 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS- 98 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe-
Confidence 456788889999875 999999999999999996433211 111245788999999999999999999999999963
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccc----ccccchhhhhhhH
Q 018094 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA----TAPLLCAGITVYS 173 (361)
Q Consensus 98 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~----aa~l~~~~~~a~~ 173 (361)
..++|+||+.+++++++++|+++++++ +++++.++.+||+
T Consensus 99 ------------------------------------~~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~ 142 (345)
T cd08293 99 ------------------------------------FNWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI 142 (345)
T ss_pred ------------------------------------cCCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence 125799999999999999999875443 4567778999999
Q ss_pred HHHhhCCCCCC--CEEEEEcc-chHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC
Q 018094 174 PLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG 246 (361)
Q Consensus 174 ~l~~~~~~~~g--~~VlI~Ga-g~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 246 (361)
++...+.+++| ++|||+|+ |++|++++|+|+.+|+ +|+++++++++...+.+++|+++++++.+.+ .+.++++
T Consensus 143 al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~ 222 (345)
T cd08293 143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP 222 (345)
T ss_pred HHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC
Confidence 99887778876 99999997 9999999999999999 8999998888776664559999998876543 3444443
Q ss_pred -CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC---Cc----ccC--hHHH-hhCCcEEEecccCC-----HHHHH
Q 018094 247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK---PL----ELP--AFSL-LMGRKIVGGSMIGG-----MKETQ 310 (361)
Q Consensus 247 -g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~----~~~--~~~~-~~~~~~i~g~~~~~-----~~~~~ 310 (361)
++|++||++|+.. +..++++++++|+++.+|..+. .. .+. ...+ ..+++++.++.... .+.++
T Consensus 223 ~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T cd08293 223 EGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIA 301 (345)
T ss_pred CCceEEEECCCcHH-HHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHH
Confidence 7999999999876 7899999999999999985321 11 111 1111 23445443332211 23467
Q ss_pred HHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 311 EMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 311 ~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++++++.++++++.. ..++++++++|++.+.+++..||+|+++
T Consensus 302 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 302 QLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 788999999998765 5679999999999999998889999874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=296.21 Aligned_cols=320 Identities=27% Similarity=0.365 Sum_probs=260.1
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhC-CCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKN-EWGN--AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g-~~~~--~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~ 97 (361)
.+..+.+.++|.|.+.+++|+||+.++++|+.|++...+ ..+. ..+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 85 (343)
T cd05285 6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE 85 (343)
T ss_pred cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence 346788889999999999999999999999999887632 1111 1356789999999999999999999999999876
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHh
Q 018094 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177 (361)
Q Consensus 98 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~ 177 (361)
+. ..|++|.+|+.|.+++|++..+.. .....|+|++|+.++.+.++++|+++++++++.+ .++.+||+++ .
T Consensus 86 ~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~ 156 (343)
T cd05285 86 PG-VPCRTCEFCKSGRYNLCPDMRFAA------TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R 156 (343)
T ss_pred cc-cCCCCChhHhCcCcccCcCccccc------cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence 54 499999999999999998642210 1124689999999999999999999999998776 5778899887 6
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHH------HHHHhcC--Cc
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD------EMQAAMG--TM 248 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~------~~~~~~~--g~ 248 (361)
...++++++|||.|+|.+|++++|+|+.+|++ |+++++++++. ++++++|++.++++++.+ .+.+.+. ++
T Consensus 157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd05285 157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRL-EFAKELGATHTVNVRTEDTPESAEKIAELLGGKGP 235 (343)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence 67789999999998899999999999999997 77777776665 555889999988876533 3444443 59
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc--eee-
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--ADI- 325 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~--~~~- 325 (361)
|++|||.|+...+..++++++++|+++.+|..+....++...+..+++++.++.... +.++.+++++.++.+. +..
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~ 314 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYA-NTYPTAIELLASGKVDVKPLIT 314 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccCh-HHHHHHHHHHHcCCCCchHhEE
Confidence 999999998655889999999999999998755444555556777888888875443 6788899999999875 223
Q ss_pred EEEecccHHHHHHHHHcCC-CcEEEEE
Q 018094 326 EVIPADYVNTALERLAKAD-VRYRFVI 351 (361)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~-~~gkvvi 351 (361)
++|+++++.+|++.+.+++ ..+|++|
T Consensus 315 ~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 315 HRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred EEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 7899999999999998875 4599998
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=296.93 Aligned_cols=288 Identities=18% Similarity=0.191 Sum_probs=235.9
Q ss_pred cCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 19 RDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 19 ~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
+..|+.|++.++|.|.|+++||||||.++++|+.|. .|.+.....|.++|+|++|+|+++|+ +|++||||+.
T Consensus 13 ~~~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~-- 84 (325)
T TIGR02825 13 YPTDSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLA-- 84 (325)
T ss_pred CCCCCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEE--
Confidence 345677888899999999999999999999999654 33333233467999999999999874 5999999962
Q ss_pred ccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEEC----CCCCCcccc-cccchhhhhhhH
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI----PEGTPLDAT-APLLCAGITVYS 173 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~i----P~~~~~~~a-a~l~~~~~~a~~ 173 (361)
.++|++|+.++.++++++ |+++++++| +++++++.|||+
T Consensus 85 ------------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~ 128 (325)
T TIGR02825 85 ------------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYF 128 (325)
T ss_pred ------------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHH
Confidence 236899999999988887 999999987 688999999999
Q ss_pred HHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH-H---HHHHhcC-C
Q 018094 174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-D---EMQAAMG-T 247 (361)
Q Consensus 174 ~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~-~---~~~~~~~-g 247 (361)
++.....+++|++|||+|+ |++|++++|+||.+|++|+++++++++... ++++|++.++++.+. + .+...++ +
T Consensus 129 ~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~-~~~lGa~~vi~~~~~~~~~~~~~~~~~~g 207 (325)
T TIGR02825 129 GLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAY-LKKLGFDVAFNYKTVKSLEETLKKASPDG 207 (325)
T ss_pred HHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCCEEEeccccccHHHHHHHhCCCC
Confidence 9988888999999999996 999999999999999999999988777644 488999999987653 2 2333333 7
Q ss_pred ccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-----Ccc--cChHHHhhCCcEEEecccCC------HHHHHHHHH
Q 018094 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-----PLE--LPAFSLLMGRKIVGGSMIGG------MKETQEMID 314 (361)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~ 314 (361)
+|++||++|+.. +..++++++++|+++.+|.... ... .....++.+++++.++...+ .+.++++++
T Consensus 208 vdvv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T TIGR02825 208 YDCYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLK 286 (325)
T ss_pred eEEEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHH
Confidence 999999999875 7899999999999999986432 111 12334567888888875422 346788999
Q ss_pred HHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 315 ~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++.+|++++.. .+|+++++++|++.+++++..||+|++
T Consensus 287 l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 287 WVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 99999999876 789999999999999999989999974
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=294.65 Aligned_cols=326 Identities=25% Similarity=0.396 Sum_probs=264.5
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.+.. .+.+.+++.+.|++.++||+||+.++++|+.|+....+.+. ..+|.++|+|++|+|+.+|+++..|++
T Consensus 1 ~~a~~~~~---~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTG---PGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEec---CCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCC
Confidence 34555533 34678888999999999999999999999999998877652 345788999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|+..+.. .|+.|.+|..+.+..|+..... +....|+|++|+.++++.++++|+++++++++.+ ..+.+
T Consensus 77 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~t 147 (343)
T cd08236 77 GDRVAVNPLL-PCGKCEYCKKGEYSLCSNYDYI-------GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAV 147 (343)
T ss_pred CCEEEEcCCC-CCCCChhHHCcChhhCCCcceE-------ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHH
Confidence 9999775544 8999999999999999885321 2235799999999999999999999999998877 56789
Q ss_pred hhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCH--HHHHHhcC-
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG- 246 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~- 246 (361)
||+++. ...++++++|||+|+|.+|++++|+|+.+|++ |+++++++++.. +++++|++.++++.+. +.+.+..+
T Consensus 148 a~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~-~l~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (343)
T cd08236 148 ALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLA-VARELGADDTINPKEEDVEKVRELTEG 225 (343)
T ss_pred HHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH-HHHHcCCCEEecCccccHHHHHHHhCC
Confidence 999986 56689999999998899999999999999997 888888776655 4478999888876543 33333443
Q ss_pred -CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc---ccChHHHhhCCcEEEecccCC-----HHHHHHHHHHHH
Q 018094 247 -TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL---ELPAFSLLMGRKIVGGSMIGG-----MKETQEMIDFAA 317 (361)
Q Consensus 247 -g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~ 317 (361)
++|++||+.|....+..++++|+++|+++.+|...... ..+...++.+++++.++...+ .+.++.+++++.
T Consensus 226 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (343)
T cd08236 226 RGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLA 305 (343)
T ss_pred CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHH
Confidence 59999999987666889999999999999998654432 223344567888888876543 466888999999
Q ss_pred cCCCc--eee-EEEecccHHHHHHHHHc-CCCcEEEEE
Q 018094 318 KHNIR--ADI-EVIPADYVNTALERLAK-ADVRYRFVI 351 (361)
Q Consensus 318 ~~~l~--~~~-~~~~l~~~~~a~~~~~~-~~~~gkvvi 351 (361)
++++. +.+ +.+++++++++++.+++ ++..||+|+
T Consensus 306 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 306 SGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 99876 334 89999999999999998 666788874
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=291.74 Aligned_cols=298 Identities=16% Similarity=0.162 Sum_probs=238.1
Q ss_pred ccccceecc-c-CCC--CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCC
Q 018094 10 PKNAFGWAA-R-DTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 10 ~~~~~~~~~-~-~~~--~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
.|+++.+.. + +.+ ..+++.++|.|+|+++||+|||++++||+.|.....+ ...+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 356666655 2 233 6788899999999999999999999999987653221 124578999999999985 44
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC---ceEECCCCCCc----
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH---FVVRIPEGTPL---- 158 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~v~~iP~~~~~---- 158 (361)
++|++||||+. .++|++|+.++.+ .++++|+++++
T Consensus 76 ~~~~~Gd~V~~--------------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~ 117 (329)
T cd08294 76 SKFPVGTIVVA--------------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPP 117 (329)
T ss_pred CCCCCCCEEEe--------------------------------------eCCeeeEEEECCccccceEECCccccccCCh
Confidence 67999999962 2478999999999 99999999982
Q ss_pred -ccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 159 -DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 159 -~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
..++++++++.|||+++.....+++|++|||+|+ |.+|++++|+|+.+|++|+++++++++. ++++++|+++++++.
T Consensus 118 ~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-~~l~~~Ga~~vi~~~ 196 (329)
T cd08294 118 SLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-AWLKELGFDAVFNYK 196 (329)
T ss_pred HHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHcCCCEEEeCC
Confidence 2234678899999999988888999999999996 9999999999999999999998888776 445789999999887
Q ss_pred CHHH---HHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--C-----cccChHHHhhCCcEEEecccCC
Q 018094 237 DQDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--P-----LELPAFSLLMGRKIVGGSMIGG 305 (361)
Q Consensus 237 ~~~~---~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~-----~~~~~~~~~~~~~~i~g~~~~~ 305 (361)
+++. +.+.+ +++|++||++|+.. +..++++++++|+++.+|.... . .......++.+++++.++....
T Consensus 197 ~~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 275 (329)
T cd08294 197 TVSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYR 275 (329)
T ss_pred CccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhh
Confidence 6543 33333 37999999999854 8999999999999999985321 1 1222345677888988875433
Q ss_pred H-----HHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 306 M-----KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 306 ~-----~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
. +.++.+++++.++++++.. .+++++++++|++.+.+++..||+|+++
T Consensus 276 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 276 WQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 2 3367788999999998765 7899999999999999999899999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-38 Score=286.75 Aligned_cols=289 Identities=27% Similarity=0.398 Sum_probs=244.6
Q ss_pred CCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccC
Q 018094 22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVG 101 (361)
Q Consensus 22 ~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~ 101 (361)
+..+++++++.|++.+++|+||+.++++|++|++...+.+.....|.++|+|++|+|+.+|++++.+++||+|+..+.++
T Consensus 11 ~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 90 (306)
T cd08258 11 PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFS 90 (306)
T ss_pred CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcC
Confidence 45688999999999999999999999999999988887654334578899999999999999999999999999888888
Q ss_pred CCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCC
Q 018094 102 SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD 181 (361)
Q Consensus 102 ~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~ 181 (361)
.|+.|++|.++.++.|+.... .+....|+|++|+.++...++++|+++++++++ +.....++|+++.....+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~ 162 (306)
T cd08258 91 TCGRCPYCRRGDYNLCPHRKG-------IGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGI 162 (306)
T ss_pred CCCCCcchhCcCcccCCCCce-------eeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCC
Confidence 999999999999999986311 122356999999999999999999999999886 677788999999888888
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~vid~~ 255 (361)
+++++|||.|+|.+|++++|+|+.+|++|++++. .++.+.++++++|++++ ++...+ .+.+..+ ++|++||+.
T Consensus 163 ~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~ 241 (306)
T cd08258 163 RPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGADVVIECS 241 (306)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCCEEEECC
Confidence 9999999987899999999999999999888743 33434566788999877 665433 3333333 699999999
Q ss_pred CCcccHHHHHHhhccCCEEEEecCCC-CCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 319 (361)
|+...+...+++++++|+++.+|... ....++...++.+++++.|++.++.++++++++++++|
T Consensus 242 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 242 GAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 87666888999999999999999865 24566777788899999999999999999999999875
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=288.11 Aligned_cols=317 Identities=21% Similarity=0.321 Sum_probs=252.1
Q ss_pred CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccc
Q 018094 23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEW---GNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99 (361)
Q Consensus 23 ~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 99 (361)
+.+.+.+.|.|.+.+++++||+.++++|+.|++...+.. ....+|.++|||++|+|+.+|+++..+++||+|+..+.
T Consensus 11 ~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~ 90 (341)
T cd05281 11 PGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETH 90 (341)
T ss_pred CceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCc
Confidence 468888999999999999999999999999988754421 12245678999999999999999999999999977654
Q ss_pred cCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhC
Q 018094 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG 179 (361)
Q Consensus 100 ~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~ 179 (361)
+ +|+.|++|..+.+++|.+. ++.+ ....|+|++|+.++.+.++++|++++.+++ ++...+.++++++. .
T Consensus 91 ~-~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~ 159 (341)
T cd05281 91 I-VCGKCYQCRTGNYHVCQNT--KILG-----VDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--A 159 (341)
T ss_pred c-CCCCChHHHCcCcccCccc--ceEe-----ccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--h
Confidence 4 9999999999999999753 2222 235689999999999999999999988544 56667778887765 2
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH--HHHHhcC--CccEEEEc
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMG--TMDGIIDT 254 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~~~~--g~d~vid~ 254 (361)
..++|++|||.|+|.+|++++|+|+.+|. +|+++.+++++ ..+++++|++++++.+..+ .+.++.+ ++|++||+
T Consensus 160 ~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~ 238 (341)
T cd05281 160 GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYR-LELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEM 238 (341)
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHH-HHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEEC
Confidence 35789999998889999999999999999 68887555544 4666889998888765433 3344443 79999999
Q ss_pred CCCcccHHHHHHhhccCCEEEEecCCCCCcccChH-HHhhCCcEEEecccCC-HHHHHHHHHHHHcCCCce--ee-EEEe
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGRKIVGGSMIGG-MKETQEMIDFAAKHNIRA--DI-EVIP 329 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~~-~~~~~~~~~~l~~~~l~~--~~-~~~~ 329 (361)
+|+......++++|+++|+++.+|.......++.. .+..+++.+.++.... .+.+..+++++.++.+++ .+ ..++
T Consensus 239 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 318 (341)
T cd05281 239 SGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLP 318 (341)
T ss_pred CCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEec
Confidence 98876688999999999999999865543333322 3566788887765322 356788999999998863 33 7899
Q ss_pred cccHHHHHHHHHcCCCcEEEEEE
Q 018094 330 ADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 330 l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+++++++|+.+.+++ .||+|++
T Consensus 319 ~~~~~~a~~~~~~~~-~gk~vv~ 340 (341)
T cd05281 319 LEDFEEAFELMRSGK-CGKVVLY 340 (341)
T ss_pred HHHHHHHHHHHhcCC-CceEEec
Confidence 999999999999998 8999986
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=288.53 Aligned_cols=304 Identities=19% Similarity=0.265 Sum_probs=244.6
Q ss_pred cceeccc---CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 13 AFGWAAR---DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 13 ~~~~~~~---~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
++.+... +.++.++..++|.|+++++||+||++++++|+.|+....+..+...+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (336)
T TIGR02817 2 AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFK 81 (336)
T ss_pred ceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 3444443 5577888889999999999999999999999999988877655456688999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+... .....|+|++|+.++.+.++++|+++++++++.+++...
T Consensus 82 ~Gd~V~~~~--------------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ 129 (336)
T TIGR02817 82 PGDEVWYAG--------------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSI 129 (336)
T ss_pred CCCEEEEcC--------------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHH
Confidence 999997311 012368999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCC-----CCEEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCC--HHH
Q 018094 170 TVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDE 240 (361)
Q Consensus 170 ~a~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~ 240 (361)
+||+++.....+++ |++|||+|+ |.+|++++|+|+.+ |++|+++++++++...+ +++|+++++++.. ...
T Consensus 130 ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~ 208 (336)
T TIGR02817 130 TAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKAQ 208 (336)
T ss_pred HHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHHH
Confidence 99999988777776 999999997 99999999999998 99999999888776555 8899999887543 233
Q ss_pred HHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccC------C------HH
Q 018094 241 MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG------G------MK 307 (361)
Q Consensus 241 ~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~------~------~~ 307 (361)
+.+.. +++|++||++++.......+++++++|+++.++.. ..++...+..+++++.+.... . ..
T Consensus 209 i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
T TIGR02817 209 LEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHH 285 (336)
T ss_pred HHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHH
Confidence 44443 37999999987655588999999999999988532 233444445565665543221 0 13
Q ss_pred HHHHHHHHHHcCCCceee-EEE---ecccHHHHHHHHHcCCCcEEEEEE
Q 018094 308 ETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 308 ~~~~~~~~l~~~~l~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
.++++++++.++++++.+ +.+ +++++++|++.+.+++..||++++
T Consensus 286 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 286 LLNRVARLVDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 468889999999988654 455 468999999999999988999875
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=289.25 Aligned_cols=308 Identities=22% Similarity=0.280 Sum_probs=251.6
Q ss_pred cccceecccCCC-CCccceeeeccCCCC-CeEEEEEeeeccccchhhhhhCCCCCC-C----CCCcccccccEEEEEeCC
Q 018094 11 KNAFGWAARDTS-GVLSPFHFSRRATGE-KDVTFKVTHCGICHSDLHLIKNEWGNA-I----YPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 11 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~-~~vlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~~lG~e~~G~V~~vG~ 83 (361)
|+++.+...+.+ +.+.+.++|.|+|.+ ++|+||+.++++|++|+....|..+.. . +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 556666554333 357888999999888 999999999999999999888765422 2 577899999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
++..|++||+|+... ...|+|++|+.++...++++|+++++++++.
T Consensus 81 ~v~~~~~Gd~V~~~~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~ 126 (341)
T cd08290 81 GVKSLKPGDWVIPLR----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAAT 126 (341)
T ss_pred CCCCCCCCCEEEecC----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHH
Confidence 999999999997421 1358999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCCcEEecCCCH-
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSFLVSRDQ- 238 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~~~v~~~~~~- 238 (361)
+++...+||+++.....++++++|||+|+ |.+|++++|+|+.+|+++++++++++ ...+.++++|+++++++...
T Consensus 127 ~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 206 (341)
T cd08290 127 LSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR 206 (341)
T ss_pred hhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc
Confidence 99999999999988778899999999987 99999999999999999999988762 22344478999998876543
Q ss_pred --H---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCH-----
Q 018094 239 --D---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM----- 306 (361)
Q Consensus 239 --~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----- 306 (361)
+ .+....+ ++|++||++|+.. ...++++++++|+++.+|.... ...++...++.+++++.+......
T Consensus 207 ~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (341)
T cd08290 207 SLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRAN 285 (341)
T ss_pred cccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcC
Confidence 2 2333333 6999999999876 7789999999999999986432 344555566789999988765321
Q ss_pred -----HHHHHHHHHHHcCCCceee-EEE---ecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 307 -----KETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 307 -----~~~~~~~~~l~~~~l~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
..+..+++++.++++.+.. ..+ ++++++++++.+.+++..||+|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 286 PEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 2477788999999988755 667 9999999999999988889999875
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=286.47 Aligned_cols=319 Identities=19% Similarity=0.257 Sum_probs=253.6
Q ss_pred CCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCC---CCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 22 SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEW---GNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 22 ~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
...++++++|.|.+.++||+||+.++++|++|+..+.+.. ....+|.++|||++|+|+++|+++++|++||+|+..+
T Consensus 8 ~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 87 (340)
T TIGR00692 8 GYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVET 87 (340)
T ss_pred CCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECC
Confidence 3457788899999999999999999999999998765531 1123566899999999999999999999999997664
Q ss_pred ccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhh
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 178 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~ 178 (361)
+ +.|+.|..|..+.+++|.+..+. +....|+|++|+.++++.++++|++++++++ +++..+.+|++++.
T Consensus 88 ~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~-- 156 (340)
T TIGR00692 88 H-IVCGKCYACRRGQYHVCQNTKIF-------GVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL-- 156 (340)
T ss_pred c-CCCCCChhhhCcChhhCcCcceE-------eecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH--
Confidence 4 49999999999999999986322 1235789999999999999999999998655 56677888888763
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGII 252 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~vi 252 (361)
..+++|++++|.|+|.+|++++|+|+.+|++ |+++.+ ++++.++++++|++.+++....+ .+.++.+ ++|++|
T Consensus 157 ~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vl 235 (340)
T TIGR00692 157 AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDP-NEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFL 235 (340)
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECC-CHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEE
Confidence 3467999999988899999999999999997 777744 44445666889998888765433 3334433 799999
Q ss_pred EcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChH-HHhhCCcEEEecccC-CHHHHHHHHHHHHcCCCc--eee-EE
Q 018094 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGRKIVGGSMIG-GMKETQEMIDFAAKHNIR--ADI-EV 327 (361)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~~~~-~~~~~~~~~~~l~~~~l~--~~~-~~ 327 (361)
|++|+...+...+++++++|+++.+|.......++.. .++.+++++.+.... ..+.+.++++++.+++++ +.+ +.
T Consensus 236 d~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 315 (340)
T TIGR00692 236 EMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHK 315 (340)
T ss_pred ECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeee
Confidence 9988766688899999999999999876433333333 456678888775422 234578899999999987 333 89
Q ss_pred EecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 328 IPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 328 ~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++++++++.+.+++ .||+|+++
T Consensus 316 ~~l~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 316 FKFDKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred eeHHHHHHHHHHHhcCC-CceEEEeC
Confidence 99999999999999887 49999864
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=281.09 Aligned_cols=317 Identities=27% Similarity=0.417 Sum_probs=261.0
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV 100 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 100 (361)
+++.+.+.++|.|++.+++|+||++++++|+.|+....|.++. .+|.++|+|++|+|+.+|++++++++||+|+..+..
T Consensus 8 ~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~ 86 (334)
T cd08234 8 GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNI 86 (334)
T ss_pred CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCc
Confidence 4457888899999999999999999999999999988886653 377899999999999999999999999999887766
Q ss_pred CCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCC
Q 018094 101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180 (361)
Q Consensus 101 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~ 180 (361)
.|++|.+|..+..+.|..... .+....|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++ ....
T Consensus 87 -~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~ 156 (334)
T cd08234 87 -YCGECFYCRRGRPNLCENLTA-------VGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLG 156 (334)
T ss_pred -CCCCCccccCcChhhCCCcce-------eccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcC
Confidence 599999999999999887531 11225689999999999999999999999998765 6778889888 5677
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHHHH--HHhc-CCccEEEEcCC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEM--QAAM-GTMDGIIDTVS 256 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~--~~~~-~g~d~vid~~g 256 (361)
++++++|||+|+|.+|++++++|+.+|++ |+++++++++... ++++|++.++++.+.+.. +... .++|++||+.|
T Consensus 157 ~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~ 235 (334)
T cd08234 157 IKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLEL-AKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATG 235 (334)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCC
Confidence 89999999998899999999999999997 7777777766544 488998877776543321 2222 37999999998
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee--e-EEEecc
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD--I-EVIPAD 331 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~--~-~~~~l~ 331 (361)
....+..++++++++|+++.+|.... ...+....++.+++++.+... ..+.++.+++++.++++++. . .+++++
T Consensus 236 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (334)
T cd08234 236 VPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI-NPYTFPRAIALLESGKIDVKGLVSHRLPLE 314 (334)
T ss_pred ChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc-CHHHHHHHHHHHHcCCCChhhhEEEEecHH
Confidence 76668899999999999999987543 234555555668888888764 34568889999999988742 3 789999
Q ss_pred cHHHHHHHHHcCCCcEEEEE
Q 018094 332 YVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 332 ~~~~a~~~~~~~~~~gkvvi 351 (361)
+++++++.+.+ +..||+++
T Consensus 315 ~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 315 EVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHhc-CCceEEEe
Confidence 99999999998 77899986
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=280.28 Aligned_cols=327 Identities=25% Similarity=0.316 Sum_probs=266.1
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++..++....+++++.+.|.+++++++|++.++++|++|++...|.++. ...|.++|||++|+|+++|+++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 55666665545567778888888899999999999999999999988876543 24678899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|++..+. .|+.| .+..|..... .|....|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 81 ~Gd~V~~~~~~-~~~~~------~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ 146 (336)
T cd08276 81 VGDRVVPTFFP-NWLDG------PPTAEDEASA-------LGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGL 146 (336)
T ss_pred CCCEEEEeccc-ccccc------cccccccccc-------cccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHH
Confidence 99999764432 34433 3334422111 1234578999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-H---HHHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~---~~~~~~~ 245 (361)
+||+++.....+++|++|+|+|+|.+|+++++++++.|++|++++++++++..+ +++|.+.+++... . +.+.+.+
T Consensus 147 ~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 225 (336)
T cd08276 147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLT 225 (336)
T ss_pred HHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHc
Confidence 999999888888999999999889999999999999999999999888776555 6689888887654 3 2344444
Q ss_pred C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018094 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322 (361)
Q Consensus 246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~ 322 (361)
+ ++|++||+++... +..++++++++|+++.+|..... .......++.+++++.++.....+.+.++++++.++.+.
T Consensus 226 ~~~~~d~~i~~~~~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 304 (336)
T cd08276 226 GGRGVDHVVEVGGPGT-LAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR 304 (336)
T ss_pred CCCCCcEEEECCChHH-HHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc
Confidence 3 7999999998654 88999999999999999875432 244556667899999998877778899999999988887
Q ss_pred eee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 323 ADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.. +.+++++++++++.+.+++..+|+++++
T Consensus 305 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 305 PVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred cccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 655 8999999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=281.97 Aligned_cols=306 Identities=23% Similarity=0.289 Sum_probs=249.6
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+|+++.+...+.+..+++.+++.|.+.++||+||+.++|+|++|++...|.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 47778877666778899999999999999999999999999999998888766555688899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+.. ....|+|++|+.++.+.++++|+++++++++.+++...
T Consensus 81 ~Gd~V~~~----------------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ 126 (327)
T PRK10754 81 VGDRVVYA----------------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL 126 (327)
T ss_pred CCCEEEEC----------------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence 99999631 12358899999999999999999999999999899999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
+||.++.....+++|++|+|+|+ |.+|++++++|+.+|++|+.++++++++..+ +++|++++++....+ .+.+.+
T Consensus 127 ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 205 (327)
T PRK10754 127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEIT 205 (327)
T ss_pred HHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHc
Confidence 99999888888899999999986 9999999999999999999999888776554 889998888765533 344444
Q ss_pred C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCc------EEEecccCCH----HHHHHH
Q 018094 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRK------IVGGSMIGGM----KETQEM 312 (361)
Q Consensus 246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~------~i~g~~~~~~----~~~~~~ 312 (361)
+ ++|++||++|+.. ...++++++++|+++.+|..... ..++...+..++. .+.+.. .+. +.+..+
T Consensus 206 ~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 283 (327)
T PRK10754 206 GGKKVRVVYDSVGKDT-WEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYI-TTREELTEASNEL 283 (327)
T ss_pred CCCCeEEEEECCcHHH-HHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeeccc-CCHHHHHHHHHHH
Confidence 3 6999999999854 88899999999999999875432 2233333322221 122221 122 234567
Q ss_pred HHHHHcCCCcee---eEEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 313 IDFAAKHNIRAD---IEVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 313 ~~~l~~~~l~~~---~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++++.++.+++. .+.|++++++++++.+.+++..||+|+.
T Consensus 284 ~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 284 FSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 899999998854 3899999999999999999989999985
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=277.92 Aligned_cols=307 Identities=24% Similarity=0.265 Sum_probs=250.0
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC---CCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+...+.+..+++.+.+.|.+.+++|+||+.++++|++|++...|..+. ..+|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 45666644444556667777777789999999999999999999888775432 345678999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
+++||+|+.... ...|+|++|+.++..+++++|+++++++++.+++.
T Consensus 81 ~~~Gd~V~~~~~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~ 127 (324)
T cd08244 81 AWLGRRVVAHTG---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHD 127 (324)
T ss_pred CCCCCEEEEccC---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcch
Confidence 999999974210 13789999999999999999999999999999999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH---HHH
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQA 243 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~ 243 (361)
+.+|| ++.....++++++|+|+|+ |.+|++++++|+.+|++|+++++++++...+ +++|++.+++..+.+. +.+
T Consensus 128 ~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 205 (324)
T cd08244 128 GRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVRE 205 (324)
T ss_pred HHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHH
Confidence 99995 4555677899999999996 9999999999999999999999888776554 8899988887765433 333
Q ss_pred hcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCC------HHHHHHHHH
Q 018094 244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGG------MKETQEMID 314 (361)
Q Consensus 244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~ 314 (361)
..+ ++|+++|++|+.. ...++++++++|+++.+|..... ..++....+.+++++.++.... .+.+..+++
T Consensus 206 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (324)
T cd08244 206 ALGGGGVTVVLDGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALA 284 (324)
T ss_pred HcCCCCceEEEECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHH
Confidence 333 6999999999876 78899999999999999875432 3455455567888888775433 245777889
Q ss_pred HHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 315 ~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++.++++.+.+ +.++++++++|++.+.+++..||+++++
T Consensus 285 ~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 285 EAAAGRLVPVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHCCCccCccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999887655 8999999999999999999889999863
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=279.46 Aligned_cols=311 Identities=23% Similarity=0.289 Sum_probs=255.9
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
+|+++++...+....+++.+.+.|.+.+++++||+.++++|+.|+....+.++. ...|.++|||++|+|+++|+++.++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 577788766555556777777888899999999999999999999888775532 2446789999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhh
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
++||+|+. ...+|+|++|+.++.+.++++|+++++++++.+++.+
T Consensus 81 ~~Gd~V~~-----------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~ 125 (334)
T PTZ00354 81 KEGDRVMA-----------------------------------LLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF 125 (334)
T ss_pred CCCCEEEE-----------------------------------ecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence 99999963 1235899999999999999999999999999999999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH----HHHH
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQA 243 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~ 243 (361)
.+||+++.....++++++|+|+|+ |.+|++++++|+.+|++++++++++++...+ +++|++++++....+ .+.+
T Consensus 126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~ 204 (334)
T PTZ00354 126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK 204 (334)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence 999999988888899999999996 9999999999999999988888877776555 789998888765533 3334
Q ss_pred hc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-Ccc-cChHHHhhCCcEEEecccCCH----------HHH
Q 018094 244 AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLE-LPAFSLLMGRKIVGGSMIGGM----------KET 309 (361)
Q Consensus 244 ~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~~~~~i~g~~~~~~----------~~~ 309 (361)
.+ .++|++||+.++.. +..++++++++|+++.+|...+ ... ++...++.++.++.++..... +.+
T Consensus 205 ~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (334)
T PTZ00354 205 LTGEKGVNLVLDCVGGSY-LSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFE 283 (334)
T ss_pred HhCCCCceEEEECCchHH-HHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHH
Confidence 44 37999999998754 8899999999999999986543 222 666666778778888654331 224
Q ss_pred HHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCcc
Q 018094 310 QEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANTM 357 (361)
Q Consensus 310 ~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~ 357 (361)
+.+++++.++.+.+.+ +.+++++++++++.+.+++..||+++++.+++
T Consensus 284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~~ 332 (334)
T PTZ00354 284 REVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPL 332 (334)
T ss_pred HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence 6778889999888655 89999999999999998888899999988765
|
|
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-36 Score=274.94 Aligned_cols=295 Identities=22% Similarity=0.297 Sum_probs=243.0
Q ss_pred ccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 018094 12 NAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVG 91 (361)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~G 91 (361)
+++.+...+ |..+++++.+.|.+.++||+||+.++++|+.|++...+ ...|.++|||++|+|+++|+++..|++|
T Consensus 2 ~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 2 RALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred eEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 445554332 66777888999999999999999999999999987652 1235689999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhh
Q 018094 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV 171 (361)
Q Consensus 92 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a 171 (361)
|+|+. ....|+|++|+.++.++++++|+++++++++++++.+.+|
T Consensus 77 d~V~~-----------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta 121 (305)
T cd08270 77 ARVVG-----------------------------------LGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTA 121 (305)
T ss_pred CEEEE-----------------------------------ecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHH
Confidence 99973 1236899999999999999999999999999999999999
Q ss_pred hHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018094 172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~ 250 (361)
|+++...... +|++|+|+|+ |.+|++++++++.+|++|+.+++++++... ++++|++.++...+ + ...+++|+
T Consensus 122 ~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~-~~~~g~~~~~~~~~-~---~~~~~~d~ 195 (305)
T cd08270 122 LRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG-LRELGAAEVVVGGS-E---LSGAPVDL 195 (305)
T ss_pred HHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCcEEEeccc-c---ccCCCceE
Confidence 9999887765 5999999998 999999999999999999999888776544 47799876554322 1 11247999
Q ss_pred EEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhh--CCcEEEecccCC----HHHHHHHHHHHHcCCCce
Q 018094 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLM--GRKIVGGSMIGG----MKETQEMIDFAAKHNIRA 323 (361)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~--~~~~i~g~~~~~----~~~~~~~~~~l~~~~l~~ 323 (361)
+||++|+.. +..++++++++|+++.+|.... ...++...+.. ++.++.++.... .+.++.+++++.++++++
T Consensus 196 vl~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 274 (305)
T cd08270 196 VVDSVGGPQ-LARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDP 274 (305)
T ss_pred EEECCCcHH-HHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccc
Confidence 999999875 8999999999999999987543 23445555544 688888876553 356888899999999987
Q ss_pred ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 324 DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 324 ~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.. +++++++++++++.+.+++..||+++++
T Consensus 275 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 275 RIGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred eeccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 66 8999999999999999998889999875
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=277.27 Aligned_cols=305 Identities=24% Similarity=0.301 Sum_probs=234.9
Q ss_pred cceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCC----CCCCcccccccEEEE---EeC-CC
Q 018094 13 AFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA----IYPIVPGHEIVGVVT---EVG-SK 84 (361)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~----~~p~~lG~e~~G~V~---~vG-~~ 84 (361)
.......+++..+..++.++|.|++++++|++.++++|+.|+.+..|.+... .+|.+.+.++.|.+. .+| ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~ 87 (347)
T KOG1198|consen 8 VSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDV 87 (347)
T ss_pred EEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEecccccc
Confidence 3333333445556677899999999999999999999999999999876543 366555555555533 334 22
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccccccc
Q 018094 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (361)
Q Consensus 85 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l 164 (361)
+..+..||++. .....|+|+||+++|...++++|+++++++||++
T Consensus 88 ~~~~~~g~~~~-----------------------------------~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~ 132 (347)
T KOG1198|consen 88 VGGWVHGDAVV-----------------------------------AFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAAL 132 (347)
T ss_pred ccceEeeeEEe-----------------------------------eccCCCceeeEEEcchhhccCCCCccChhhhhcC
Confidence 23355566554 3467899999999999999999999999999999
Q ss_pred chhhhhhhHHHHhhC------CCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 165 LCAGITVYSPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 165 ~~~~~~a~~~l~~~~------~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
+.++.|||.++.... +.++|++|||+|+ |++|++++|+|+..|+..++++.+.++ .++++++|+++++|+++
T Consensus 133 p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~lGAd~vvdy~~ 211 (347)
T KOG1198|consen 133 PLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKLGADEVVDYKD 211 (347)
T ss_pred chHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHcCCcEeecCCC
Confidence 999999999999999 8899999999987 999999999999999655555555554 46779999999999999
Q ss_pred HHHHHHhcC----CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC---CcccC-----hHH-----HhhCCc-EEE
Q 018094 238 QDEMQAAMG----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK---PLELP-----AFS-----LLMGRK-IVG 299 (361)
Q Consensus 238 ~~~~~~~~~----g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~~~-----~~~-----~~~~~~-~i~ 299 (361)
++.+++... ++|+||||+|+.. ......++...|+...++.... ..... ... ...++. ...
T Consensus 212 ~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (347)
T KOG1198|consen 212 ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRW 290 (347)
T ss_pred HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceee
Confidence 776665543 7999999999975 7788888988887665554332 11111 000 011111 122
Q ss_pred ecccCCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 300 GSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 300 g~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
.....+.+.++.+.++++++++++.+ +.||++++.+|++.+.+++..||+++.++
T Consensus 291 ~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 291 LYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred eeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 33345667789999999999999998 99999999999999999999999999875
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-36 Score=274.54 Aligned_cols=310 Identities=22% Similarity=0.247 Sum_probs=243.2
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++..++++..+++.++|.|.+++++|+||+.++++|++|+....|.++. ..+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 56666665555557889999999999999999999999999999988886542 235778999999999998 456899
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+...+ ..|....|+|++|+.++.++++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~-----------------------------~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ 129 (325)
T cd05280 79 EGDEVLVTGY-----------------------------DLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGF 129 (325)
T ss_pred CCCEEEEccc-----------------------------ccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHH
Confidence 9999975321 01223578999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCC--C-CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH--HHHH
Q 018094 170 TVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQA 243 (361)
Q Consensus 170 ~a~~~l~~~~~~--~-~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~~~~ 243 (361)
++|.+++..... . .+++|+|+|+ |.+|++++|+|+.+|++|++++++++++..+ +++|++++++..+.+ ..+.
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 208 (325)
T cd05280 130 TAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKP 208 (325)
T ss_pred HHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHH
Confidence 999998765433 4 4579999998 9999999999999999999999988876555 789998888765432 2222
Q ss_pred hc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCH------HHHHHHHHH
Q 018094 244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM------KETQEMIDF 315 (361)
Q Consensus 244 ~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~------~~~~~~~~~ 315 (361)
.. +++|++||+.|+.. +..++++++++|+++.+|.... ...++...++.+++++.+...... +.++.+.++
T Consensus 209 ~~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
T cd05280 209 LLKARWAGAIDTVGGDV-LANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATE 287 (325)
T ss_pred hcCCCccEEEECCchHH-HHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHH
Confidence 22 37999999999864 8999999999999999987543 224444455578888888654321 223444555
Q ss_pred HHcCCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 316 AAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 316 l~~~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+..+...+...++++++++++++.+.+++..||+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 288 WKPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HhcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 55664444448999999999999999999999999864
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=272.60 Aligned_cols=308 Identities=24% Similarity=0.284 Sum_probs=245.1
Q ss_pred cceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCCCC
Q 018094 13 AFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKVG 91 (361)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~~G 91 (361)
++++...++|..++++++|+|.+.+++|+||+.++++|++|++...|.++. ..+|.++|||++|+|+. +++.+|++|
T Consensus 2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~G 79 (323)
T TIGR02823 2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREG 79 (323)
T ss_pred eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCC
Confidence 344444555668889999999999999999999999999999988886532 24578899999999998 566789999
Q ss_pred CEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhh
Q 018094 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV 171 (361)
Q Consensus 92 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a 171 (361)
|+|++..+. .+....|+|++|+.+|.+.++++|+++++++++.+++.+.+|
T Consensus 80 d~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta 130 (323)
T TIGR02823 80 DEVIVTGYG-----------------------------LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTA 130 (323)
T ss_pred CEEEEccCC-----------------------------CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHH
Confidence 999753210 022346899999999999999999999999999999999999
Q ss_pred hHHHHhhCC--CCCCC-EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH-HHHHhc-
Q 018094 172 YSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-EMQAAM- 245 (361)
Q Consensus 172 ~~~l~~~~~--~~~g~-~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~- 245 (361)
|.+++.... +.+++ +|||+|+ |.+|++++++|+.+|+++++++++++++ +.++++|++.+++..+.+ .+..+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~ 209 (323)
T TIGR02823 131 ALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEE-DYLKELGASEVIDREDLSPPGKPLEK 209 (323)
T ss_pred HHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHhcCCcEEEccccHHHHHHHhcC
Confidence 887754432 68898 9999997 9999999999999999999988888777 444889998888765533 233333
Q ss_pred CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccC--CH----HHHHHHHHHHHc
Q 018094 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIG--GM----KETQEMIDFAAK 318 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~--~~----~~~~~~~~~l~~ 318 (361)
+++|++||++|+.. +..++++++++|+++.+|.... ...++...++.+++++.+.... .. +.+..+.+++..
T Consensus 210 ~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (323)
T TIGR02823 210 ERWAGAVDTVGGHT-LANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKP 288 (323)
T ss_pred CCceEEEECccHHH-HHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhc
Confidence 36999999999875 8899999999999999997643 2333445556788998886432 11 235556667777
Q ss_pred CCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 319 HNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 319 ~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.+++..+.++++++++||+.+.+++..||+|+++
T Consensus 289 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 289 RNLESITREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred CCCcCceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 87776568999999999999999999899999863
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=274.02 Aligned_cols=301 Identities=23% Similarity=0.312 Sum_probs=248.8
Q ss_pred cccceecccCC--CCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~--~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+..+++ ++.+++++++.|.+.+++++||+.++++|+.|++...|.+.. ..+|.++|||++|+|+.+|+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 67777776666 678889999999999999999999999999999988876542 357889999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
+++||+|+. ...|+|++|+.++.+.++++|++ +.+++.++++
T Consensus 82 ~~~Gd~V~~------------------------------------~~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~ 123 (329)
T cd08250 82 FKVGDAVAT------------------------------------MSFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS 123 (329)
T ss_pred CCCCCEEEE------------------------------------ecCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence 999999974 23689999999999999999997 4567789999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHH
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA 243 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~ 243 (361)
+.+||+++.....++++++|+|+|+ |.+|++++++|+.+|++|+++++++++...+ +++|++.+++..+.+ .+..
T Consensus 124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~ 202 (329)
T cd08250 124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLKK 202 (329)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHHH
Confidence 9999999988888899999999996 9999999999999999999999887776555 789988887765432 2333
Q ss_pred hc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-----------cccChHHHhhCCcEEEecccCC-----H
Q 018094 244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-----------LELPAFSLLMGRKIVGGSMIGG-----M 306 (361)
Q Consensus 244 ~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~i~g~~~~~-----~ 306 (361)
.. .++|++||+.|+.. +..++++++++|+++.+|..... ..++ ...+.+++++.++.... .
T Consensus 203 ~~~~~vd~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 280 (329)
T cd08250 203 EYPKGVDVVYESVGGEM-FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIP 280 (329)
T ss_pred hcCCCCeEEEECCcHHH-HHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHH
Confidence 22 37999999999854 88999999999999999865421 1122 23456888888876532 3
Q ss_pred HHHHHHHHHHHcCCCceee---EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 307 KETQEMIDFAAKHNIRADI---EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 307 ~~~~~~~~~l~~~~l~~~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+.+.++++++.++.+++.. +.++++++++|++.+.+++..||++++
T Consensus 281 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 281 QHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 4577888999999888743 569999999999999988888999874
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=272.83 Aligned_cols=292 Identities=24% Similarity=0.302 Sum_probs=246.3
Q ss_pred CccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCC
Q 018094 24 VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102 (361)
Q Consensus 24 ~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~ 102 (361)
.+.+++.|.|.+.+++|+||+.++++|+.|.....+.+.. ..+|.++|||++|+|+.+|++++++++||+|+..+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG---- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence 5777788899999999999999999999999888775532 34577899999999999999999999999997421
Q ss_pred CCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCC
Q 018094 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDK 182 (361)
Q Consensus 103 c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 182 (361)
..|+|++|+.++...++++|+++++++++.+++...+||+++.....+.
T Consensus 89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~ 137 (323)
T cd05282 89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP 137 (323)
T ss_pred -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence 1689999999999999999999999999999999999999998888889
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH---HHHhcC--CccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~~--g~d~vid~~g 256 (361)
++++|||+|+ |.+|++++++|+.+|+++++++++++++..+ +++|+++++++.+.+. +.+.++ ++|++||++|
T Consensus 138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g 216 (323)
T cd05282 138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG 216 (323)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence 9999999997 9999999999999999999999988876555 8899998888765433 334443 7999999999
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCH----------HHHHHHHHHHHcCCCceee
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGM----------KETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~l~~~~l~~~~ 325 (361)
+.. ....+++++++|+++.+|..... ..++...+..+++++.++..... +.+..+++++.++++.+..
T Consensus 217 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 295 (323)
T cd05282 217 GES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV 295 (323)
T ss_pred CHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence 876 77889999999999999875442 45555555558888888654321 3477788999999888765
Q ss_pred -EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 326 -EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 326 -~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+.|++++++++|+.+.+++..||++++
T Consensus 296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 899999999999999988888999864
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=271.82 Aligned_cols=310 Identities=22% Similarity=0.266 Sum_probs=236.8
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+++..+.+.++|.|.+.++||+||+.++++|++|.....+... ...+|.++|||++|+|+++| +.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 4566665544445678889999999999999999999999999876543211 22457899999999999964 56799
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+..+.. .+....|+|++|+.++++.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ 129 (326)
T cd08289 79 PGDEVIVTSYD-----------------------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGF 129 (326)
T ss_pred CCCEEEEcccc-----------------------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHH
Confidence 99999753210 1223579999999999999999999999999999999999
Q ss_pred hhhHHHHhhCC---CCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH--HHHHH
Q 018094 170 TVYSPLRFYGL---DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQA 243 (361)
Q Consensus 170 ~a~~~l~~~~~---~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~ 243 (361)
+||.+++.... ...+++|||+|+ |.+|++++|+|+.+|++|+++++++++...+ +++|++.+++.++. +.+.+
T Consensus 130 ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~ 208 (326)
T cd08289 130 TAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKP 208 (326)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHh
Confidence 99988764332 345789999998 9999999999999999999999988876555 88999888876543 22333
Q ss_pred hc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCC--HHHHHHHHHHHHc-
Q 018094 244 AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG--MKETQEMIDFAAK- 318 (361)
Q Consensus 244 ~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~l~~- 318 (361)
.. .++|++||++|+. .+..++++++++|+++.+|.... ...++...++.+++++.+..... ......+++.+.+
T Consensus 209 ~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (326)
T cd08289 209 LEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATD 287 (326)
T ss_pred hccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhh
Confidence 33 3799999999985 48999999999999999997643 23444555668899998874321 1122233333322
Q ss_pred ---CCCcee-eEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 319 ---HNIRAD-IEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 319 ---~~l~~~-~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
..+... .++++++++++||+.+.+++..||+++++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 288 LKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 222223 48999999999999999999899999864
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=268.75 Aligned_cols=308 Identities=21% Similarity=0.240 Sum_probs=245.8
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.+...+.+..+++.+.+.|.+.+++|+||+.++++|+.|++...+.++....|.++|||++|+|+++|+ .++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 4555554433345566677777889999999999999999999998888665456678999999999999995 57999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|+..... .+....|+|++|+.++...++++|+++++++++.+++++.+
T Consensus 79 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 129 (320)
T cd08243 79 GQRVATAMGG-----------------------------MGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYT 129 (320)
T ss_pred CCEEEEecCC-----------------------------CCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHH
Confidence 9999753210 01124689999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC--HHHHHHhcCC
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQAAMGT 247 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~g 247 (361)
||+++.....+++|++|||+|+ |.+|++++|+|+.+|++|+.+++++++...+ +++|++++++... .+.+.+...+
T Consensus 130 a~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~ 208 (320)
T cd08243 130 AWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGG 208 (320)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCC
Confidence 9999988888899999999997 9999999999999999999999888776554 8899988765422 2334444347
Q ss_pred ccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcc---cChHHH--hhCCcEEEecccCC--HHHHHHHHHHHHcCC
Q 018094 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE---LPAFSL--LMGRKIVGGSMIGG--MKETQEMIDFAAKHN 320 (361)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~---~~~~~~--~~~~~~i~g~~~~~--~~~~~~~~~~l~~~~ 320 (361)
+|++||++|+.. +..++++++++|+++.+|...+... ...... ..+++++.++.... ...++.+++++.++.
T Consensus 209 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
T cd08243 209 FDKVLELVGTAT-LKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGH 287 (320)
T ss_pred ceEEEECCChHH-HHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCc
Confidence 999999999854 8899999999999999987543221 122222 25777877765433 245788899999998
Q ss_pred Cceee-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 321 IRADI-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 321 l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
+++.. +.++++++++|++.+.+++..||+++
T Consensus 288 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 288 LDIPPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred eecccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 87654 89999999999999998888899886
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=272.57 Aligned_cols=311 Identities=23% Similarity=0.267 Sum_probs=240.2
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++...+ ++.+++.+++.|.++++||+||+.++++|++|++...+.+ ....|.++|||++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 78 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKV 78 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCC
Confidence 4566665444 5788999999999999999999999999999998775543 1234678999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|+..+.. .|+ +...+|+|++|+.++...++++|+++++++++.+++.+.+
T Consensus 79 Gd~V~~~~~~-~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~t 131 (339)
T cd08249 79 GDRVAGFVHG-GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVT 131 (339)
T ss_pred CCEEEEEecc-ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHH
Confidence 9999754321 000 1235799999999999999999999999999999999999
Q ss_pred hhHHHHhhCCC----------CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH
Q 018094 171 VYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 171 a~~~l~~~~~~----------~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
||+++.....+ +++++|||+|+ |.+|++++++|+.+|++|+.++ +++++ +.++++|++++++..+.+
T Consensus 132 a~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~-~~~~~~g~~~v~~~~~~~ 209 (339)
T cd08249 132 AALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNF-DLVKSLGADAVFDYHDPD 209 (339)
T ss_pred HHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccH-HHHHhcCCCEEEECCCch
Confidence 99998766544 78999999997 9999999999999999999887 44555 444889999888876543
Q ss_pred ---HHHHhc-CCccEEEEcCCCcccHHHHHHhhcc--CCEEEEecCCCCCcccChHHHhhCCcEEEec-------ccCCH
Q 018094 240 ---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLVGAPEKPLELPAFSLLMGRKIVGGS-------MIGGM 306 (361)
Q Consensus 240 ---~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~-------~~~~~ 306 (361)
.+.+.. +++|++||++|+...+..+++++++ +|+++.+|.......+.. ......+..... .....
T Consensus 210 ~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T cd08249 210 VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRK-GVKVKFVLGYTVFGEIPEDREFGE 288 (339)
T ss_pred HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCCC-CceEEEEEeeeecccccccccchH
Confidence 333333 3799999999984558999999999 999999986543221110 000011111110 01112
Q ss_pred HHHHHHHHHHHcCCCceee-EEEe--cccHHHHHHHHHcCC-CcEEEEEEe
Q 018094 307 KETQEMIDFAAKHNIRADI-EVIP--ADYVNTALERLAKAD-VRYRFVIDV 353 (361)
Q Consensus 307 ~~~~~~~~~l~~~~l~~~~-~~~~--l~~~~~a~~~~~~~~-~~gkvvi~~ 353 (361)
..+..+++++.++++.+.. ..++ ++++++||+.+.+++ ..+|+|+++
T Consensus 289 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 289 VFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 4577788999999888754 6777 999999999999988 889999874
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=268.63 Aligned_cols=307 Identities=20% Similarity=0.256 Sum_probs=246.6
Q ss_pred cccceecccCCCC---CccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSG---VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~---~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|++++++..+.+. .++..++|.|.+.+++|+||+.++++|++|++...+.++...+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 4556665544333 3666778888899999999999999999999988776553446778999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
|++||+|+.... ....|+|++|+.++..+++++|++++.++++.+++.
T Consensus 81 ~~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~ 128 (336)
T cd08252 81 FKVGDEVYYAGD--------------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLT 128 (336)
T ss_pred CCCCCEEEEcCC--------------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhH
Confidence 999999974210 124689999999999999999999999999999999
Q ss_pred hhhhhHHHHhhCCCCC-----CCEEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEEecCCC--H
Q 018094 168 GITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRD--Q 238 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~ 238 (361)
..+||+++.....+.+ |++|+|+|+ |.+|++++++|+.+| ++|+++++++++...+ +++|++.+++... .
T Consensus 129 ~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~ 207 (336)
T cd08252 129 SLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLA 207 (336)
T ss_pred HHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHH
Confidence 9999999877777777 999999996 999999999999999 8999999888776555 7899988887653 1
Q ss_pred HHHHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC------------
Q 018094 239 DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG------------ 305 (361)
Q Consensus 239 ~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------------ 305 (361)
+.+.... +++|++||++|+...+..++++++++|+++.+|... ..++...++.+++++.+.....
T Consensus 208 ~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08252 208 EQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQ 285 (336)
T ss_pred HHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccchhhH
Confidence 2333333 379999999997556899999999999999998653 3344444456777777643321
Q ss_pred HHHHHHHHHHHHcCCCceee----EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 306 MKETQEMIDFAAKHNIRADI----EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 306 ~~~~~~~~~~l~~~~l~~~~----~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
...++++++++.++.+++.. +.+++++++++++.+.+++..||++++
T Consensus 286 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 286 HEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 13477889999999888642 357999999999999999988999874
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=270.00 Aligned_cols=307 Identities=25% Similarity=0.308 Sum_probs=239.7
Q ss_pred cccceecccCCCC-CccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCC---------------CCCCCCccccc
Q 018094 11 KNAFGWAARDTSG-VLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWG---------------NAIYPIVPGHE 73 (361)
Q Consensus 11 ~~~~~~~~~~~~~-~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~lG~e 73 (361)
|+++++...+++. .+++++.+.|.| .+++|+||++++++|++|++...|... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 4566655444432 478889999999 499999999999999999998876421 23568899999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECC
Q 018094 74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153 (361)
Q Consensus 74 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP 153 (361)
++|+|+++|+++.++++||+|+..+. ....|+|++|+.++.+.++++|
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~--------------------------------~~~~g~~~~~~~v~~~~~~~lp 128 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVP--------------------------------PWSQGTHAEYVVVPENEVSKKP 128 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecC--------------------------------CCCCccceeEEEecHHHeecCC
Confidence 99999999999999999999975321 1246899999999999999999
Q ss_pred CCCCcccccccchhhhhhhHHHHhhCCCCC----CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC
Q 018094 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKP----GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228 (361)
Q Consensus 154 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~----g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g 228 (361)
+++++++++.+++.+.+||+++.....+.+ |++|+|+|+ |.+|++++++|+.+|++|+++++. + +.++++++|
T Consensus 129 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~~~~~~g 206 (350)
T cd08248 129 KNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIPLVKSLG 206 (350)
T ss_pred CCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHHHHHHhC
Confidence 999999999999999999999988776654 999999996 999999999999999999888764 3 455678899
Q ss_pred CcEEecCCCHHHHHHhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC----cccC----hH--HHhh---
Q 018094 229 ADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP----LELP----AF--SLLM--- 293 (361)
Q Consensus 229 ~~~v~~~~~~~~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~----~~--~~~~--- 293 (361)
.+.+++..+.+...++. +++|++||++|+. ....++++++++|+++.+|..... ..+. .. .+..
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (350)
T cd08248 207 ADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV 285 (350)
T ss_pred CceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHH
Confidence 98888876654444433 3799999999987 489999999999999999854211 0110 00 1110
Q ss_pred ----CCcEE-EecccCCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 294 ----GRKIV-GGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 294 ----~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+...+ .+........+..+++++.++.+.+.. +.|++++++++++.+.+++..+|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 11111 111223356789999999999887655 899999999999999988888898863
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=262.52 Aligned_cols=291 Identities=23% Similarity=0.320 Sum_probs=235.9
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhh-hCCCCC--CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLI-KNEWGN--AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~ 97 (361)
.++.+++.+++.|++.++||+||+.++++|++|++.+ .|.... +.+|.++|||++|+|+.+|+++.++++||+|+.
T Consensus 3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~- 81 (312)
T cd08269 3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG- 81 (312)
T ss_pred CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE-
Confidence 4457888999999999999999999999999999887 664321 234778999999999999999999999999974
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHh
Q 018094 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177 (361)
Q Consensus 98 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~ 177 (361)
...|+|++|+.++.+.++++|+++ ..++.+..++.++|+++.
T Consensus 82 -----------------------------------~~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~- 123 (312)
T cd08269 82 -----------------------------------LSGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR- 123 (312)
T ss_pred -----------------------------------ecCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence 235889999999999999999998 223222367788898887
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCH---HHHHHhcC--CccEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQ---DEMQAAMG--TMDGI 251 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--g~d~v 251 (361)
...++++++|||+|+|.+|++++++|+.+|++ |+++++.+++. ++++++|++.+++.+.. +.+.+.+. ++|++
T Consensus 124 ~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~v 202 (312)
T cd08269 124 RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL-ALARELGATEVVTDDSEAIVERVRELTGGAGADVV 202 (312)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEE
Confidence 67789999999998899999999999999998 88887776665 46688999888876543 33444443 79999
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEecCCC-CCcccChHHHhhCCcEEEecccCC----HHHHHHHHHHHHcCCCce--e
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGG----MKETQEMIDFAAKHNIRA--D 324 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~l~~~~l~~--~ 324 (361)
||+.|+...+..++++++++|+++.+|... ....++...+..+++.+.++.... .+.++++++++.++++++ .
T Consensus 203 ld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 282 (312)
T cd08269 203 IEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSL 282 (312)
T ss_pred EECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhh
Confidence 999987666889999999999999998654 223455556677888887765433 257889999999999886 2
Q ss_pred e-EEEecccHHHHHHHHHcCCC-cEEEEE
Q 018094 325 I-EVIPADYVNTALERLAKADV-RYRFVI 351 (361)
Q Consensus 325 ~-~~~~l~~~~~a~~~~~~~~~-~gkvvi 351 (361)
. +.+++++++++++.+.+++. .+|+++
T Consensus 283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 283 LTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 3 78999999999999988865 488886
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=247.10 Aligned_cols=290 Identities=21% Similarity=0.203 Sum_probs=238.2
Q ss_pred CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC---CCCCCcccccccEEEEEeC--CCCCCCCCCCEEEEc
Q 018094 23 GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVG--SKVSKFKVGDKVGVG 97 (361)
Q Consensus 23 ~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG--~~~~~~~~Gd~V~~~ 97 (361)
+.++++++++|+|+++|||||++|.+++| ..+|++.. -..|.-+|-..+|.++... |+...|++||.|.
T Consensus 25 d~F~lee~~vp~p~~GqvLl~~~ylS~DP----ymRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~-- 98 (340)
T COG2130 25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDP----YMRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV-- 98 (340)
T ss_pred CCceeEeccCCCCCcCceEEEEEEeccCH----HHeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE--
Confidence 56899999999999999999999999987 23443322 2456777777665444332 6678899999995
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccc--cccchhhhhhhHHH
Q 018094 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT--APLLCAGITVYSPL 175 (361)
Q Consensus 98 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~a--a~l~~~~~~a~~~l 175 (361)
...+|++|..++.+.+.+++++.-+..+ -.|..+..|||.+|
T Consensus 99 ------------------------------------~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gL 142 (340)
T COG2130 99 ------------------------------------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGL 142 (340)
T ss_pred ------------------------------------ecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHH
Confidence 3458999999999999999876543333 37888999999999
Q ss_pred HhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc----CCccE
Q 018094 176 RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDG 250 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~g~d~ 250 (361)
.+++..|+|++|+|.+| |++|..+.|+||..|++|+.++.+++|...+.+++|.+.++||+.++...++. +|+|+
T Consensus 143 l~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDv 222 (340)
T COG2130 143 LDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDV 222 (340)
T ss_pred HHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEE
Confidence 99999999999999987 99999999999999999999999999998887679999999998876544443 48999
Q ss_pred EEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc--cc-----ChHHHhhCCcEEEecccCC------HHHHHHHHHHHH
Q 018094 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--EL-----PAFSLLMGRKIVGGSMIGG------MKETQEMIDFAA 317 (361)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~-----~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~l~ 317 (361)
.||++|++. +...+..|+..+|++.||..+... .. ....++.+++++.|+.... .+.++++.++++
T Consensus 223 yfeNVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~ 301 (340)
T COG2130 223 YFENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVK 301 (340)
T ss_pred EEEcCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHH
Confidence 999999987 999999999999999999865321 11 2233677899999986522 255788899999
Q ss_pred cCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 318 KHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 318 ~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
+|+|+... .+-+|+.+++||..|.+++++||+|+++.+
T Consensus 302 ~GKi~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 302 EGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred cCceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 99999877 566799999999999999999999999863
|
|
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=262.12 Aligned_cols=310 Identities=23% Similarity=0.272 Sum_probs=243.6
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++...+++..++++++|.|.+.+++|+||+.++++|++|+....|.+.. ..+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 56666655455557889999999999999999999999999999888775432 24578899999999998 7778899
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+.... + .+....|+|++|+.++.+.++++|+++++++++.+++.+.
T Consensus 79 ~Gd~V~~~~~---------------~--------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ 129 (324)
T cd08288 79 PGDRVVLTGW---------------G--------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGF 129 (324)
T ss_pred CCCEEEECCc---------------c--------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHH
Confidence 9999975210 0 0112468999999999999999999999999999999988
Q ss_pred hhhHHHH---hhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH-HHHHh
Q 018094 170 TVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-EMQAA 244 (361)
Q Consensus 170 ~a~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~ 244 (361)
+++.++. .....+++++|||+|+ |.+|++++|+|+.+|++|++++.++++...+ +++|+++++++.+.. .+..+
T Consensus 130 ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~ 208 (324)
T cd08288 130 TAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPL 208 (324)
T ss_pred HHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhh
Confidence 8887654 3333236789999998 9999999999999999999999888776555 899999988876533 23333
Q ss_pred cC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCC------HHHHHHHHHHH
Q 018094 245 MG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG------MKETQEMIDFA 316 (361)
Q Consensus 245 ~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~l 316 (361)
.. ++|.+||++++.. +..++..++.+|+++.+|.... ....+...++.+++++.+..... .+.++.+.+++
T Consensus 209 ~~~~~~~~~d~~~~~~-~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (324)
T cd08288 209 QKERWAGAVDTVGGHT-LANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDL 287 (324)
T ss_pred ccCcccEEEECCcHHH-HHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHH
Confidence 33 6899999999744 7788888999999999987532 22334444557888888864211 23466677788
Q ss_pred HcCCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 317 AKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 317 ~~~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.++.+.+..+.+++++++++++.+.+++..||+++++
T Consensus 288 ~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 288 DPALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred hcCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 8888876568999999999999999999999999864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=261.33 Aligned_cols=304 Identities=28% Similarity=0.348 Sum_probs=248.9
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++...+.++.+++.+++.|.+.+++++||+.++++|+.|++...+.++. ..+|.++|||++|+|+++|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 45666655455667777788888889999999999999999999888775532 34678999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+. ....|+|++|+.++...++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~-----------------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~ 125 (323)
T cd05276 81 VGDRVCA-----------------------------------LLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFF 125 (323)
T ss_pred CCCEEEE-----------------------------------ecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHH
Confidence 9999973 12458999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
++|+++.....+.++++|+|+|+ |.+|++++++++..|+++++++++.++...+ +++|++.+++....+ .+.+..
T Consensus 126 ~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 126 TAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEAT 204 (323)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHh
Confidence 99999888778899999999997 9999999999999999999998887776555 788988887766543 233333
Q ss_pred --CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCH----------HHHHHH
Q 018094 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM----------KETQEM 312 (361)
Q Consensus 246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~ 312 (361)
.++|++||++|+.. ...++++++++|+++.+|..+. ...++...++.+++++.++..... ..+.++
T Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
T cd05276 205 GGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV 283 (323)
T ss_pred CCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHH
Confidence 37999999999876 8889999999999999986543 234455555678888888754332 225667
Q ss_pred HHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 313 ~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
++++.++++++.. +.|++++++++++.+.+++..||+++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 284 WPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8888889887655 89999999999999998888888874
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=260.36 Aligned_cols=311 Identities=24% Similarity=0.310 Sum_probs=251.0
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++...+.+..+.+.++|.|.+.+++++|++.++++|++|+....|.+. ...+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 4566666555566688889999999999999999999999999988877553 235678899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+..... .....|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~v~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 130 (325)
T cd08253 81 VGDRVWLTNLG------------------------------WGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPAL 130 (325)
T ss_pred CCCEEEEeccc------------------------------cCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHH
Confidence 99999753210 001368999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (361)
+||+++.....+.+|++++|+|+ |.+|++++++++.+|++|+++++++++...+ +++|++.+++....+. +.+..
T Consensus 131 ~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 209 (325)
T cd08253 131 TAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAAT 209 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHc
Confidence 99999988788899999999997 9999999999999999999999888776555 7789888887665433 33333
Q ss_pred --CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC--H----HHHHHHHHHHH
Q 018094 246 --GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG--M----KETQEMIDFAA 317 (361)
Q Consensus 246 --~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~--~----~~~~~~~~~l~ 317 (361)
.++|++||++++.. ....+++++++|+++.+|.......++...++.++.++.+..... . +.++.+.+++.
T Consensus 210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
T cd08253 210 AGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLA 288 (325)
T ss_pred CCCceEEEEECCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHH
Confidence 27999999999875 788899999999999998754333445555556777777654332 2 23455667777
Q ss_pred cCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 318 KHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 318 ~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++.+++.. +.+++++++++++.+.+++..||+++++
T Consensus 289 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 289 DGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CCCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 88777655 8999999999999999988889999863
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=260.12 Aligned_cols=301 Identities=24% Similarity=0.324 Sum_probs=239.7
Q ss_pred ccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 12 NAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
+++++...+.+..+++.+.+.|.+.+++|+|++.++++|++|+..+.|.+.. ..+|.++|||++|+|+.+|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 4556655566677888999999999999999999999999999988776543 246789999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|+.. ...|+|++|+.++.+.++++|+++++++++.+++.+.+
T Consensus 82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~t 126 (331)
T cd08273 82 GDRVAAL-----------------------------------TRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVT 126 (331)
T ss_pred CCEEEEe-----------------------------------CCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHH
Confidence 9999742 12488999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHH-Hhc-CC
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ-AAM-GT 247 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~-~g 247 (361)
||+++.....++++++|+|+|+ |.+|++++++|+.+|++|+.+++ +++. ++++++|+.. ++....+... ... ++
T Consensus 127 a~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~-~~~~~~g~~~-~~~~~~~~~~~~~~~~~ 203 (331)
T cd08273 127 AYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNH-AALRELGATP-IDYRTKDWLPAMLTPGG 203 (331)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHH-HHHHHcCCeE-EcCCCcchhhhhccCCC
Confidence 9999988788899999999997 99999999999999999999987 5554 5558899754 3433322211 222 47
Q ss_pred ccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcc--cCh--------------HHHhhCCcEEEecccC-------
Q 018094 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE--LPA--------------FSLLMGRKIVGGSMIG------- 304 (361)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~~--------------~~~~~~~~~i~g~~~~------- 304 (361)
+|++||++++.. +..++++++++|+++.+|....... +.. .....+..++.+....
T Consensus 204 ~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 282 (331)
T cd08273 204 VDVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKL 282 (331)
T ss_pred ceEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHH
Confidence 999999999987 8899999999999999987543211 110 0112233333333221
Q ss_pred CHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 305 GMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 305 ~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
..+.+..+++++.++.+++.. +.+++++++++++.+.+++..||+|+
T Consensus 283 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 283 FRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 125678899999999988755 89999999999999998888899885
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=260.06 Aligned_cols=289 Identities=21% Similarity=0.205 Sum_probs=232.3
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC---CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVG 97 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~ 97 (361)
+++.+++.++|.|++.+++|+||+.++++|+.|.....+.... ...+.++|+|++|+|+++|++ ++++||+|+.
T Consensus 16 ~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~- 92 (329)
T cd05288 16 PPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG- 92 (329)
T ss_pred CccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec-
Confidence 3467888899999999999999999999999886555442211 123457899999999999964 7999999962
Q ss_pred cccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEecc-CceEECCCCCC--cccccc-cchhhhhhhH
Q 018094 98 CMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIPEGTP--LDATAP-LLCAGITVYS 173 (361)
Q Consensus 98 ~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~v~~iP~~~~--~~~aa~-l~~~~~~a~~ 173 (361)
.++|++|+.++. +.++++|++++ +.+++. +++.+.+||+
T Consensus 93 -------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~ 135 (329)
T cd05288 93 -------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYF 135 (329)
T ss_pred -------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHH
Confidence 247999999999 99999999995 445544 8899999999
Q ss_pred HHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH-cCCcEEecCCCHHH---HHHhc-CC
Q 018094 174 PLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER-LGADSFLVSRDQDE---MQAAM-GT 247 (361)
Q Consensus 174 ~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~-~g~~~v~~~~~~~~---~~~~~-~g 247 (361)
++.....+.++++|||+|+ |.+|++++|+|+.+|++|+++++++++...+ ++ +|++.+++..+.+. +.+.. ++
T Consensus 136 ~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 214 (329)
T cd05288 136 GLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL-VEELGFDAAINYKTPDLAEALKEAAPDG 214 (329)
T ss_pred HHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhhcCCceEEecCChhHHHHHHHhccCC
Confidence 9988888899999999996 9999999999999999999998888776555 55 99988888766433 33333 47
Q ss_pred ccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcc------cChHHHhhCCcEEEecccCCH-----HHHHHHHHHH
Q 018094 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE------LPAFSLLMGRKIVGGSMIGGM-----KETQEMIDFA 316 (361)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~l 316 (361)
+|++||++|+. .+..++++++++|+++.+|....... ++....+.+++++.++..... +.+..+++++
T Consensus 215 ~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (329)
T cd05288 215 IDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWL 293 (329)
T ss_pred ceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHH
Confidence 99999999985 48999999999999999986543211 234455678899888765433 4577888999
Q ss_pred HcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 317 AKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 317 ~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
.++.+++.. ..+++++++++++.+.+++..||+++
T Consensus 294 ~~g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 294 AEGKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HCCCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 999888654 77999999999999998888888874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=251.48 Aligned_cols=265 Identities=33% Similarity=0.501 Sum_probs=220.8
Q ss_pred eEEEEEeeeccccchhhhhhCCCC-CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCC
Q 018094 39 DVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC 117 (361)
Q Consensus 39 ~vlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~ 117 (361)
||+|++.++++|+.|++...|.++ ...+|.++|||++|+|+++|++++.|++||+|+..+. ..|++|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPN-LGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCC-CCCCCCHHHHh----hC
Confidence 689999999999999999888664 3456789999999999999999999999999977665 49999999997 66
Q ss_pred cccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHH
Q 018094 118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 197 (361)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~ 197 (361)
++.... +....|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.....++++++|||+|+|.+|+
T Consensus 76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~ 148 (271)
T cd05188 76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL 148 (271)
T ss_pred CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence 654322 3446799999999999999999999999999999999999999999888779999999999855999
Q ss_pred HHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHH--h-c-CCccEEEEcCCCcccHHHHHHhhccCCE
Q 018094 198 VAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA--A-M-GTMDGIIDTVSAVHPLMPLIGLLKSQGK 273 (361)
Q Consensus 198 ~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~--~-~-~g~d~vid~~g~~~~~~~~~~~l~~~G~ 273 (361)
+++++++..|.+|+++++++++... ++++|.+.+++..+.+.... . . +++|++||+++.......++++++++|+
T Consensus 149 ~~~~~a~~~g~~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~ 227 (271)
T cd05188 149 LAAQLAKAAGARVIVTDRSDEKLEL-AKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCHHHHHH-HHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence 9999999999999999988776544 47889888877655433222 2 2 3799999999984448889999999999
Q ss_pred EEEecCCCCCccc-ChHHHhhCCcEEEecccCCHHHHHHHHHHH
Q 018094 274 LVLVGAPEKPLEL-PAFSLLMGRKIVGGSMIGGMKETQEMIDFA 316 (361)
Q Consensus 274 ~v~~g~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l 316 (361)
++.+|........ .....+.+++++.++..+...+++++++++
T Consensus 228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
T cd05188 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271 (271)
T ss_pred EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence 9999876543322 244567899999999988888888888764
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-33 Score=253.15 Aligned_cols=294 Identities=26% Similarity=0.337 Sum_probs=240.4
Q ss_pred CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcccc
Q 018094 21 TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMV 100 (361)
Q Consensus 21 ~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 100 (361)
.+..+.+.+.+.|.+.+++++|++.++++|+.|++...+.++. .+|.++|||++|+|+.+|+++.++++||+|+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~--- 85 (320)
T cd05286 10 GPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYA--- 85 (320)
T ss_pred CccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCCCEEEEe---
Confidence 3445666677777789999999999999999999988776543 457789999999999999999999999999741
Q ss_pred CCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCC
Q 018094 101 GSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180 (361)
Q Consensus 101 ~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~ 180 (361)
...|+|++|+.++.+.++++|++++.++++.+++...++|+++.....
T Consensus 86 --------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~ 133 (320)
T cd05286 86 --------------------------------GPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYP 133 (320)
T ss_pred --------------------------------cCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcC
Confidence 126889999999999999999999999999999999999999988888
Q ss_pred CCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEc
Q 018094 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDT 254 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~vid~ 254 (361)
+.+|++|||+|+ |.+|++++++++.+|++|+++++++++...+ +++|++.+++..+.+ .+...+. ++|++|||
T Consensus 134 ~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~ 212 (320)
T cd05286 134 VKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRGVDVVYDG 212 (320)
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEEC
Confidence 899999999996 9999999999999999999999888776555 889998888765533 3334443 79999999
Q ss_pred CCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEeccc----CCH----HHHHHHHHHHHcCCCceee
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMI----GGM----KETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~----~~~----~~~~~~~~~l~~~~l~~~~ 325 (361)
.++. ....++++++++|+++.+|..... ..++...+..+++++.+... ... +.+..+++++.++.+.+..
T Consensus 213 ~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 291 (320)
T cd05286 213 VGKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEI 291 (320)
T ss_pred CCcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcc
Confidence 9986 488999999999999999875433 23444444467888765322 122 2345678888899887655
Q ss_pred -EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 326 -EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 326 -~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
+.|++++++++++.+.+++..+|++++
T Consensus 292 ~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 292 GKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred cceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 899999999999999998888999985
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=255.32 Aligned_cols=307 Identities=24% Similarity=0.299 Sum_probs=245.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC-CCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++...+.++.+.+++.+.|.+.+++|+|++.++++|++|+....+... ....|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 4566665544455677778888889999999999999999999998877543 123477899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+.... + -....|+|++|+.++...++++|+++++.+++.++..+.
T Consensus 81 ~Gd~V~~~~~--------------------------~----~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (326)
T cd08272 81 VGDEVYGCAG--------------------------G----LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGI 130 (326)
T ss_pred CCCEEEEccC--------------------------C----cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHH
Confidence 9999974210 0 001368899999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH--HHHHHhcC
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMG 246 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~~ 246 (361)
+||+++.....++++++++|+|+ |.+|++++++++.+|++|+.+++. ++...+ +++|.+.+++.... +.+.+.+.
T Consensus 131 ~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 208 (326)
T cd08272 131 TAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTG 208 (326)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcC
Confidence 99999888888899999999996 999999999999999999999887 665444 78999887776543 23334433
Q ss_pred --CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC-----------HHHHHHHH
Q 018094 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-----------MKETQEMI 313 (361)
Q Consensus 247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-----------~~~~~~~~ 313 (361)
++|++||+.++.. ...++++++++|+++.+|... . ........+++++.+..... .+.+..++
T Consensus 209 ~~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (326)
T cd08272 209 GRGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAA 284 (326)
T ss_pred CCCCcEEEECCChHH-HHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHH
Confidence 6999999999865 888999999999999998653 2 22223335777776654322 34577788
Q ss_pred HHHHcCCCcee-e-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 314 DFAAKHNIRAD-I-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 314 ~~l~~~~l~~~-~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++.++.+++. . +.|++++++++++.+.+++..+|+++++
T Consensus 285 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 285 RLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHCCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 89999988765 3 8999999999999998888889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-33 Score=257.76 Aligned_cols=309 Identities=22% Similarity=0.241 Sum_probs=228.4
Q ss_pred cceecccCCCCCccceeeeccC-CCCCeEEEEEeeeccccchhhhhhCCCCCC-CCCCcccccccEEEEEeCCCCC-CCC
Q 018094 13 AFGWAARDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGSKVS-KFK 89 (361)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~p~-~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~lG~e~~G~V~~vG~~~~-~~~ 89 (361)
++++...+++..++..++|.|. +.+++|+||+.++++|++|+....+..... ..|.++|||++|+|+++|++++ .|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~ 82 (352)
T cd08247 3 ALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWK 82 (352)
T ss_pred eEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCC
Confidence 3444333444445555555553 499999999999999999998775432222 2377899999999999999998 899
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC----ceEECCCCCCcccccccc
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH----FVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~v~~iP~~~~~~~aa~l~ 165 (361)
+||+|+..... .....|+|++|+.++.. .++++|+++++++++.++
T Consensus 83 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~ 132 (352)
T cd08247 83 VGDEVCGIYPH------------------------------PYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWP 132 (352)
T ss_pred CCCEEEEeecC------------------------------CCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhH
Confidence 99999753211 01146899999999987 799999999999999999
Q ss_pred hhhhhhhHHHHhhC-CCCCCCEEEEEcc-chHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH--
Q 018094 166 CAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD-- 239 (361)
Q Consensus 166 ~~~~~a~~~l~~~~-~~~~g~~VlI~Ga-g~vG~~a~~la~~~-g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~-- 239 (361)
+...+||+++.... .+++|++|+|+|+ |.+|++++++|+.+ +. .++.+. ++++.. .++++|++.+++..+.+
T Consensus 133 ~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~-~~~~~g~~~~i~~~~~~~~ 210 (352)
T cd08247 133 LVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAE-LNKKLGADHFIDYDAHSGV 210 (352)
T ss_pred HHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHH-HHHHhCCCEEEecCCCccc
Confidence 99999999998877 7899999999998 89999999999987 55 566665 444444 55889998888765433
Q ss_pred -H----HHHhc--CCccEEEEcCCCcccHHHHHHhhc---cCCEEEEecCCC-CCcc-----------cChH----HHhh
Q 018094 240 -E----MQAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLVGAPE-KPLE-----------LPAF----SLLM 293 (361)
Q Consensus 240 -~----~~~~~--~g~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g~~~-~~~~-----------~~~~----~~~~ 293 (361)
. +...+ .++|++|||+|+......++++++ ++|+++.++... .... +... ....
T Consensus 211 ~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (352)
T cd08247 211 KLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGL 290 (352)
T ss_pred chHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcC
Confidence 2 22333 379999999998555888999999 999999874221 1111 1111 1112
Q ss_pred CCcEEEecc-cCCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 294 GRKIVGGSM-IGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 294 ~~~~i~g~~-~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+...+.... ....+.+..+++++.++.+++.. +.+++++++++|+.+++++..||+++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 291 WSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred CCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 333332211 11135578899999999988755 8999999999999999988889999863
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-32 Score=249.57 Aligned_cols=305 Identities=28% Similarity=0.342 Sum_probs=246.0
Q ss_pred ccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 12 NAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
+++.+...+.+..+.+.+.+.|.+.+++++||+.++++|+.|+....+.+.. ..+|.++|||++|+|+.+|+++.++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~ 81 (325)
T TIGR02824 2 KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKV 81 (325)
T ss_pred ceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCC
Confidence 4445444344555666677777789999999999999999999888765532 235688999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|+.. ..+|+|++|+.++...++++|+++++.+++.+++.+.+
T Consensus 82 Gd~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~t 126 (325)
T TIGR02824 82 GDRVCAL-----------------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFT 126 (325)
T ss_pred CCEEEEc-----------------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHH
Confidence 9999741 23589999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG 246 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 246 (361)
+|+++.....++++++++|+|+ |.+|++++++++.+|++|++++++.++.. +++++|.+.+++....+ .+.....
T Consensus 127 a~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (325)
T TIGR02824 127 VWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA-ACEALGADIAINYREEDFVEVVKAETG 205 (325)
T ss_pred HHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHcCCcEEEecCchhHHHHHHHHcC
Confidence 9999888888999999999997 99999999999999999999988877765 44889988777765433 3333333
Q ss_pred --CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCH----------HHHHHHH
Q 018094 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGM----------KETQEMI 313 (361)
Q Consensus 247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~ 313 (361)
++|+++|++|+.. ...++++++++|+++.+|.... ...++...++.+++++.+...... ..+.+++
T Consensus 206 ~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
T TIGR02824 206 GKGVDVILDIVGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVW 284 (325)
T ss_pred CCCeEEEEECCchHH-HHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHH
Confidence 6999999999864 8889999999999999986542 224555555678999988764331 1245567
Q ss_pred HHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 314 DFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 314 ~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++.++.+.+.. +.+++++++++++.+.+++..||+++++
T Consensus 285 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 285 PLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 888888887655 8899999999999999888889999864
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=250.62 Aligned_cols=302 Identities=27% Similarity=0.379 Sum_probs=240.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG---NAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+...+....+++++.+.|.+.+++|+||+.++++|+.|+....|... ...+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 4455554444444466677788889999999999999999999998877542 2345788999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
+++||+|+..+.. ...|+|++|+.++...++++|+++++..++.+++.
T Consensus 81 ~~~G~~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (309)
T cd05289 81 FKVGDEVFGMTPF--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLA 128 (309)
T ss_pred CCCCCEEEEccCC--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence 9999999753210 13689999999999999999999999999999999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc-
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM- 245 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~- 245 (361)
..++|+++.....+.++++|+|+|+ |.+|++++++++..|++|+++++++ +. +.++++|.+.+++....+..+...
T Consensus 129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~-~~~~~~g~~~~~~~~~~~~~~~~~~ 206 (309)
T cd05289 129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NA-DFLRSLGADEVIDYTKGDFERAAAP 206 (309)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hH-HHHHHcCCCEEEeCCCCchhhccCC
Confidence 9999999988887899999999997 9999999999999999999988766 44 455889987777765433322122
Q ss_pred CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC-HHHHHHHHHHHHcCCCcee
Q 018094 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-MKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~~~~l~~~~l~~~ 324 (361)
.++|++||++++.. ...++++++++|+++.+|....... ....+++++....... ...+..+++++.++.+.+.
T Consensus 207 ~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (309)
T cd05289 207 GGVDAVLDTVGGET-LARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPV 281 (309)
T ss_pred CCceEEEECCchHH-HHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEe
Confidence 36999999999874 8899999999999999987543211 2233555555443221 5678899999999988765
Q ss_pred e-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 325 I-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 325 ~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
. +.|++++++++++.+.+++..+|+++
T Consensus 282 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 282 VDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred eccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 5 89999999999999998887788874
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=251.97 Aligned_cols=308 Identities=27% Similarity=0.383 Sum_probs=239.0
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++..+++...+.+.++|.|.+.+++++||+.++++|++|+....+......+|.++|||++|+|+.+|+++..+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 44555532221127888999999999999999999999999999888775543334678999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||+|+.... ....|+|++|+.++.+.++++|+++++.+++.+.+.+.+
T Consensus 81 Gd~V~~~~~--------------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~ 128 (325)
T cd08271 81 GDRVAYHAS--------------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT 128 (325)
T ss_pred CCEEEeccC--------------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHH
Confidence 999975321 124689999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG 246 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 246 (361)
||+++.....+++|++++|+|+ |.+|++++++++..|++|+++. .+++. +.++++|++.+++....+ .+.+...
T Consensus 129 a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 206 (325)
T cd08271 129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNF-EYVKSLGADHVIDYNDEDVCERIKEITG 206 (325)
T ss_pred HHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHH-HHHHHcCCcEEecCCCccHHHHHHHHcC
Confidence 9999988888899999999998 8999999999999999998876 55554 445789998888765532 3344333
Q ss_pred --CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccCh--HHHhhCCcEEEecccCC--------HHHHHHHHH
Q 018094 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA--FSLLMGRKIVGGSMIGG--------MKETQEMID 314 (361)
Q Consensus 247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~--~~~~~~~~~i~g~~~~~--------~~~~~~~~~ 314 (361)
++|++++++++.. ...++++++++|+++.++.......... .....+++.+....... .+.+.++++
T Consensus 207 ~~~~d~vi~~~~~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T cd08271 207 GRGVDAVLDTVGGET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE 285 (325)
T ss_pred CCCCcEEEECCCcHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence 6999999999876 6778999999999999975432211111 11223334443332211 123567888
Q ss_pred HHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 315 ~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++.++.+++.. +.++++++.++++.+.+++..+|+++++
T Consensus 286 ~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 286 LLAAGKLEPLVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHCCCeeeccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 89899887654 8999999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-32 Score=247.70 Aligned_cols=310 Identities=24% Similarity=0.328 Sum_probs=246.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++...+.+..+++.+++.|.+.+++++|++.++++|+.|+....+.+.. ..+|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 34555554444556777788888899999999999999999999887765432 24577899999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|+..+.. +....|++++|+.++.+.++++|+++++++++.+++.+.
T Consensus 81 ~Gd~V~~~~~~------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 130 (328)
T cd08268 81 VGDRVSVIPAA------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYL 130 (328)
T ss_pred CCCEEEecccc------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHH
Confidence 99999753210 112458999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
++|.++.....+.++++++|+|+ |.+|++++++++..|+++++++++.++...+ +++|.+.+++....+ .+.+..
T Consensus 131 ~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 209 (328)
T cd08268 131 TAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRIT 209 (328)
T ss_pred HHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHh
Confidence 99999988888899999999997 9999999999999999999999888776655 778988877765432 333443
Q ss_pred C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCC----HHH----HHHHHH
Q 018094 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG----MKE----TQEMID 314 (361)
Q Consensus 246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~----~~~----~~~~~~ 314 (361)
. ++|++|+++++.. ...++++++++|+++.+|.... ...++....+.+++++.+..... ..+ ++.+.+
T Consensus 210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (328)
T cd08268 210 GGKGVDVVFDPVGGPQ-FAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILD 288 (328)
T ss_pred CCCCceEEEECCchHh-HHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHH
Confidence 3 6999999999855 8889999999999999986542 23344444567888887765432 222 444556
Q ss_pred HHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 315 ~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++.++.+.+.. +.|++++++++++.+.+++..+|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 289 GLASGALKPVVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred HHHCCCCcCCcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 67777777655 889999999999999988888999976
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=248.38 Aligned_cols=300 Identities=27% Similarity=0.330 Sum_probs=232.4
Q ss_pred cccCCCCCc--cceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC---CCCCCcccccccEEEEEeCCCCCCCCCC
Q 018094 17 AARDTSGVL--SPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSKFKVG 91 (361)
Q Consensus 17 ~~~~~~~~l--~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~lG~e~~G~V~~vG~~~~~~~~G 91 (361)
+..+++..+ ++.+.|.|.+.+++|+|+++++++|++|++...|.+.. ...|..+|||++|+|+++|+++.++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~G 83 (319)
T cd08267 4 TRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVG 83 (319)
T ss_pred CCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCC
Confidence 334455454 77788999999999999999999999999988775421 2346789999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhh
Q 018094 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV 171 (361)
Q Consensus 92 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a 171 (361)
|+|+..... ...|+|++|+.++.+.++++|+++++++++.+++.+.+|
T Consensus 84 d~V~~~~~~--------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a 131 (319)
T cd08267 84 DEVFGRLPP--------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTA 131 (319)
T ss_pred CEEEEeccC--------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHH
Confidence 999742210 135899999999999999999999999999999999999
Q ss_pred hHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc--CCc
Q 018094 172 YSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTM 248 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~g~ 248 (361)
|+++.....++++++|+|+|+ |.+|++++++|+.+|++|+++++. ++. +.++++|.+.+++....+.....+ +++
T Consensus 132 ~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 209 (319)
T cd08267 132 LQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNA-ELVRSLGADEVIDYTTEDFVALTAGGEKY 209 (319)
T ss_pred HHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHH-HHHHHcCCCEeecCCCCCcchhccCCCCC
Confidence 999998888899999999997 999999999999999999998865 554 455889988887765433322222 379
Q ss_pred cEEEEcCCCcc-cHHHHHHhhccCCEEEEecCCCCCcccC-----hH-HHhhCCcEEEecccCCHHHHHHHHHHHHcCCC
Q 018094 249 DGIIDTVSAVH-PLMPLIGLLKSQGKLVLVGAPEKPLELP-----AF-SLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321 (361)
Q Consensus 249 d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~-----~~-~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l 321 (361)
|++|||+++.. .....+..++++|+++.+|......... .. ....+.+...... ...+.+..+++++.++++
T Consensus 210 d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~ 288 (319)
T cd08267 210 DVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK-PNAEDLEQLAELVEEGKL 288 (319)
T ss_pred cEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEec-CCHHHHHHHHHHHHCCCe
Confidence 99999998532 2334444599999999998754321111 11 1122333322222 236778999999999988
Q ss_pred ceee-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 322 RADI-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 322 ~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
++.. +.|++++++++++.+.+++..+|+++
T Consensus 289 ~~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 289 KPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred eeeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 8655 89999999999999998887788874
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=243.43 Aligned_cols=304 Identities=30% Similarity=0.423 Sum_probs=243.1
Q ss_pred cccceecccCCCCCccceeeeccCCC-CCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATG-EKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~-~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
|++.++.-.+.++.+++.+.+ |.+. +++++|++.++++|++|++...|.+.. ...|.++|||++|+|+.+|+++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 345555433445566666777 6666 499999999999999999988775532 2346689999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhh
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
++||+|+.. ...|++++|+.++.+.++++|++++..+++.+....
T Consensus 80 ~~G~~V~~~-----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 124 (323)
T cd08241 80 KVGDRVVAL-----------------------------------TGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTY 124 (323)
T ss_pred CCCCEEEEe-----------------------------------cCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHH
Confidence 999999741 126889999999999999999999998888899999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHh
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAA 244 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~ 244 (361)
.+||.++.....++++++|+|+|+ |.+|++++++++..|++|+.++++.++...+ +++|++.+++....+ .+...
T Consensus 125 ~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~ 203 (323)
T cd08241 125 GTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKAL 203 (323)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHH
Confidence 999999887778899999999998 9999999999999999999999888776555 778987777765433 34444
Q ss_pred cC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcc-cChHHHhhCCcEEEecccCC---------HHHHHHH
Q 018094 245 MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGRKIVGGSMIGG---------MKETQEM 312 (361)
Q Consensus 245 ~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~---------~~~~~~~ 312 (361)
+. ++|.++|++|+.. ...++++++++|+++.+|....... +.....+.+++++.+..... .+.+.++
T Consensus 204 ~~~~~~d~v~~~~g~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (323)
T cd08241 204 TGGRGVDVVYDPVGGDV-FEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAEL 282 (323)
T ss_pred cCCCCcEEEEECccHHH-HHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHH
Confidence 33 6999999999854 8889999999999999987543322 33434566888888865432 1456778
Q ss_pred HHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 313 ~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
++++.++.+.+.. +.|++++++++++.+.+++..+|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 283 FDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 8999999887655 899999999999999888878898863
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=241.60 Aligned_cols=283 Identities=22% Similarity=0.342 Sum_probs=227.3
Q ss_pred ccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccc
Q 018094 32 RRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCA 110 (361)
Q Consensus 32 ~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~ 110 (361)
+|.+.+++++||+.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|+++.++++||+|+...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------ 69 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGT------------ 69 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEec------------
Confidence 57789999999999999999999988876543 25688999999999999999999999999997521
Q ss_pred cCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEE
Q 018094 111 IDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
....|+|++|+.++.+.++++|+++++++++.++..+.+||++++ ...+++|++++|+
T Consensus 70 ---------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~ 127 (303)
T cd08251 70 ---------------------GESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ 127 (303)
T ss_pred ---------------------CCCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence 024589999999999999999999999999999999999999986 5678999999998
Q ss_pred cc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHH
Q 018094 191 GL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 191 Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~vid~~g~~~~~~~~ 264 (361)
|+ |.+|++++|+++.+|++|+++++.+++...+ +++|++.+++....+ .+.+.++ ++|+++|++++.. ...+
T Consensus 128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~ 205 (303)
T cd08251 128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEA-IQKG 205 (303)
T ss_pred cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHH-HHHH
Confidence 76 9999999999999999999998888776555 889998888765533 3444443 7999999998754 8889
Q ss_pred HHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEe-----cccCCH----HHHHHHHHHHHcCCCceee-EEEeccc
Q 018094 265 IGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGG-----SMIGGM----KETQEMIDFAAKHNIRADI-EVIPADY 332 (361)
Q Consensus 265 ~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g-----~~~~~~----~~~~~~~~~l~~~~l~~~~-~~~~l~~ 332 (361)
+++++++|+++.+|..+. ...++... +.++..+.. ...... +.+.++++++.++.+++.. +.|++++
T Consensus 206 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 284 (303)
T cd08251 206 LNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDD 284 (303)
T ss_pred HHHhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHH
Confidence 999999999999986432 12233322 223333222 111121 3467788899999888655 8999999
Q ss_pred HHHHHHHHHcCCCcEEEEE
Q 018094 333 VNTALERLAKADVRYRFVI 351 (361)
Q Consensus 333 ~~~a~~~~~~~~~~gkvvi 351 (361)
++++++.+.+++..||+++
T Consensus 285 ~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 285 IGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHhCCCcceEeC
Confidence 9999999998888888874
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-31 Score=243.74 Aligned_cols=297 Identities=27% Similarity=0.390 Sum_probs=233.8
Q ss_pred CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
+.++.+++.+.+.|.+.+++++||+.++++|+.|+....|.+.. ...|.++|||++|+|+.+|+++.++++||+|+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~- 87 (337)
T cd08275 9 GGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL- 87 (337)
T ss_pred CCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEe-
Confidence 33446677777778889999999999999999999988775532 2457789999999999999999999999999741
Q ss_pred ccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhh
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 178 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~ 178 (361)
...|+|++|+.++.+.++++|+++++++++.+.+...++|+++...
T Consensus 88 ----------------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~ 133 (337)
T cd08275 88 ----------------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFEL 133 (337)
T ss_pred ----------------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHh
Confidence 2358999999999999999999999999999999999999999888
Q ss_pred CCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc-CCccEEEE
Q 018094 179 GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM-GTMDGIID 253 (361)
Q Consensus 179 ~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~-~g~d~vid 253 (361)
..++++++|+|+|+ |.+|++++++|+.+ ..+.++...++.....++++|++.+++....+ .+.+.. .++|++||
T Consensus 134 ~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~ 212 (337)
T cd08275 134 GNLRPGQSVLVHSAAGGVGLAAGQLCKTV-PNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLD 212 (337)
T ss_pred hCCCCCCEEEEEcCcchHHHHHHHHHHHc-cCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEE
Confidence 88899999999998 99999999999998 22222322222233445788988887765432 333333 37999999
Q ss_pred cCCCcccHHHHHHhhccCCEEEEecCCCCC----c-------------ccChHHHhhCCcEEEecccCC----H----HH
Q 018094 254 TVSAVHPLMPLIGLLKSQGKLVLVGAPEKP----L-------------ELPAFSLLMGRKIVGGSMIGG----M----KE 308 (361)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~-------------~~~~~~~~~~~~~i~g~~~~~----~----~~ 308 (361)
+.|+.. ...++++++++|+++.+|..... . .+....++.+++++.++.... . ..
T Consensus 213 ~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (337)
T cd08275 213 ALGGED-TRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEV 291 (337)
T ss_pred CCcHHH-HHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHH
Confidence 999865 78899999999999999865321 1 112234567888887765321 1 23
Q ss_pred HHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 309 TQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 309 ~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.++++++.++.+++.. +.|++++++++++.+.+++..||+++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 292 MDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 66788888899887665 8999999999999999888889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-30 Score=232.40 Aligned_cols=273 Identities=23% Similarity=0.305 Sum_probs=222.0
Q ss_pred CeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCC
Q 018094 38 KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC 117 (361)
Q Consensus 38 ~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~ 117 (361)
+|++||+.++++|++|++...|.. ..+|.++|||++|+|+++|+++..+++||+|+.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~--------------------- 57 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMG--------------------- 57 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEE---------------------
Confidence 589999999999999999988754 245789999999999999999999999999974
Q ss_pred cccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHH
Q 018094 118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLG 196 (361)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG 196 (361)
...|+|++|+.++.+.++++|+++++.+++.++++..++|.++.....+++|++|+|+|+ |.+|
T Consensus 58 ---------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g 122 (293)
T cd05195 58 ---------------LAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG 122 (293)
T ss_pred ---------------EecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence 236899999999999999999999999999999999999999988788899999999986 9999
Q ss_pred HHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC--CcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHHhhc
Q 018094 197 HVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLK 269 (361)
Q Consensus 197 ~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g--~~~v~~~~~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~ 269 (361)
++++++++.+|++++++++++++...+ ++++ ++.+++....+ .+.+... ++|++||+.|+. ....++++++
T Consensus 123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~ 200 (293)
T cd05195 123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA 200 (293)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence 999999999999999999887776555 6676 66777765543 3334432 799999999987 4899999999
Q ss_pred cCCEEEEecCCCCC--cccChHHHhhCCcEEEecccC-----C----HHHHHHHHHHHHcCCCceee-EEEecccHHHHH
Q 018094 270 SQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIG-----G----MKETQEMIDFAAKHNIRADI-EVIPADYVNTAL 337 (361)
Q Consensus 270 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~-----~----~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~ 337 (361)
++|+++.+|..... ..++... +.+++.+.+.... . .+.+..+++++.++++++.. +.++++++++++
T Consensus 201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 279 (293)
T cd05195 201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAF 279 (293)
T ss_pred cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHH
Confidence 99999999865432 1232222 3345555543221 1 23467788999999888665 789999999999
Q ss_pred HHHHcCCCcEEEEE
Q 018094 338 ERLAKADVRYRFVI 351 (361)
Q Consensus 338 ~~~~~~~~~gkvvi 351 (361)
+.+..++..||+++
T Consensus 280 ~~~~~~~~~~~ivv 293 (293)
T cd05195 280 RLMQSGKHIGKVVL 293 (293)
T ss_pred HHHhcCCCCceecC
Confidence 99998888788874
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=229.26 Aligned_cols=268 Identities=24% Similarity=0.344 Sum_probs=217.3
Q ss_pred EEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccc
Q 018094 42 FKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI 121 (361)
Q Consensus 42 V~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~ 121 (361)
||+.++++|++|++...|.++ .|.++|||++|+|+++|+++.+|++||+|+.
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~------------------------- 53 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMG------------------------- 53 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEE-------------------------
Confidence 789999999999999877543 3578999999999999999999999999974
Q ss_pred cccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHH
Q 018094 122 MTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAV 200 (361)
Q Consensus 122 ~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~ 200 (361)
...|+|++|+.++.+.++++|+++++++++.+.+.+.++|.++.....+++|++|+|+|+ |.+|++++
T Consensus 54 -----------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~ 122 (288)
T smart00829 54 -----------LAPGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI 122 (288)
T ss_pred -----------EcCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence 235899999999999999999999999999999999999999877778899999999996 99999999
Q ss_pred HHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEEecCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHHhhccCCE
Q 018094 201 KFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGK 273 (361)
Q Consensus 201 ~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~ 273 (361)
++++.+|++|+++++++++...+ +++|+ +.++++.+.+. +.+..+ ++|++||++++. ....++++++++|+
T Consensus 123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~ 200 (288)
T smart00829 123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR 200 (288)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence 99999999999999888876555 78998 67777655433 333333 699999999974 48889999999999
Q ss_pred EEEecCCCC--CcccChHHHhhCCcEEEecccC----C----HHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHc
Q 018094 274 LVLVGAPEK--PLELPAFSLLMGRKIVGGSMIG----G----MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAK 342 (361)
Q Consensus 274 ~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~----~----~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~ 342 (361)
++.+|..+. ...++... +.+++++.+.... . .+.+..+++++.++++.+.. +.|++++++++++.+..
T Consensus 201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (288)
T smart00829 201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQ 279 (288)
T ss_pred EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhc
Confidence 999986532 22333333 3456665554321 1 23467788889899887644 88999999999999998
Q ss_pred CCCcEEEEE
Q 018094 343 ADVRYRFVI 351 (361)
Q Consensus 343 ~~~~gkvvi 351 (361)
++..||+++
T Consensus 280 ~~~~~~ivv 288 (288)
T smart00829 280 GKHIGKVVL 288 (288)
T ss_pred CCCcceEeC
Confidence 887788774
|
Enoylreductase in Polyketide synthases. |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=217.63 Aligned_cols=243 Identities=28% Similarity=0.392 Sum_probs=194.1
Q ss_pred CCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEe
Q 018094 65 IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVA 144 (361)
Q Consensus 65 ~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v 144 (361)
.+|.++|||++|+|+++|+++++|++||+|+. .+.|++|+.+
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~--------------------------------------~~~~~~~~~v 60 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC--------------------------------------FGPHAERVVV 60 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEe--------------------------------------cCCcceEEEc
Confidence 47899999999999999999999999999963 2358999999
Q ss_pred ccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHH
Q 018094 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEA 223 (361)
Q Consensus 145 ~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~ 223 (361)
+.+.++++|+++++++++.+ +.+.+||+++. ...+++++++||+|+|.+|++++++|+.+|++ |+++++++++.. +
T Consensus 61 ~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~-~ 137 (277)
T cd08255 61 PANLLVPLPDGLPPERAALT-ALAATALNGVR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE-L 137 (277)
T ss_pred CHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH-H
Confidence 99999999999999998888 78999999986 56789999999998899999999999999998 988888877765 7
Q ss_pred HHHcC-CcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecc
Q 018094 224 IERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302 (361)
Q Consensus 224 ~~~~g-~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~ 302 (361)
++++| .+.+++..... ....++|++||+++........+++++++|+++.+|............+..+.+++.+..
T Consensus 138 ~~~~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 214 (277)
T cd08255 138 AEALGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQ 214 (277)
T ss_pred HHHcCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeec
Confidence 78898 55554432211 012379999999887666889999999999999998765432122233455666666654
Q ss_pred cCC------------HHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcC-CCcEEEEE
Q 018094 303 IGG------------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKA-DVRYRFVI 351 (361)
Q Consensus 303 ~~~------------~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvi 351 (361)
... .+.++++++++.++++++.. +.+++++++++|+.+.++ ....|+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 215 VYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred ccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 321 24688899999999988755 889999999999999877 33467753
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=239.04 Aligned_cols=287 Identities=20% Similarity=0.241 Sum_probs=235.9
Q ss_pred Cccceeeecc---CCCCCeEEEEEeeeccccchhhhhhCCCCCCCCC-------CcccccccEEEEEeCCCCCCCCCCCE
Q 018094 24 VLSPFHFSRR---ATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP-------IVPGHEIVGVVTEVGSKVSKFKVGDK 93 (361)
Q Consensus 24 ~l~~~~~~~p---~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~~lG~e~~G~V~~vG~~~~~~~~Gd~ 93 (361)
.|+..+-|.. +..++.=+.-|-|+.||..|+....|..+....| ++||.|++|+ .+-|.|
T Consensus 1428 SlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrR 1497 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRR 1497 (2376)
T ss_pred ceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcE
Confidence 3444444433 2366666888999999999999999987665444 7899999998 456999
Q ss_pred EEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhH
Q 018094 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYS 173 (361)
Q Consensus 94 V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~ 173 (361)
|+ +..+.-++++.+.++.+++|.+|++.++++|++.|+.+.|||+
T Consensus 1498 vM-----------------------------------~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYY 1542 (2376)
T KOG1202|consen 1498 VM-----------------------------------GMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYY 1542 (2376)
T ss_pred EE-----------------------------------EeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehh
Confidence 97 3456778999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCEEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC---cEEecCCCH---HHHHHhcC
Q 018094 174 PLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSFLVSRDQ---DEMQAAMG 246 (361)
Q Consensus 174 ~l~~~~~~~~g~~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~v~~~~~~---~~~~~~~~ 246 (361)
+|...+..|+|+++||++ +|++|++|+.+|.+.|++|+.++.+.++++.+.+.|+- +++-|+++. .-+.+.+.
T Consensus 1543 ALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~ 1622 (2376)
T KOG1202|consen 1543 ALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTK 1622 (2376)
T ss_pred hhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhc
Confidence 999999999999999985 59999999999999999999999999999988888873 445455552 34555554
Q ss_pred --CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccCh-HHHhhCCcEEEeccc-----CCHHHHHHHHHHHHc
Q 018094 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMI-----GGMKETQEMIDFAAK 318 (361)
Q Consensus 247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~-----~~~~~~~~~~~~l~~ 318 (361)
|+|+|+++...+. ++.+++||+.+||+..+|..+-..+-+. ...+.||.+++|... +..+.++++..++++
T Consensus 1623 GrGVdlVLNSLaeEk-LQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~e 1701 (2376)
T KOG1202|consen 1623 GRGVDLVLNSLAEEK-LQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAE 1701 (2376)
T ss_pred CCCeeeehhhhhHHH-HHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHh
Confidence 8999999999988 9999999999999999997654333222 234669999998655 455778888888877
Q ss_pred C----CCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 319 H----NIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 319 ~----~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
| ..+|.. ++|+-.++++||++|.++++.||||+++-.+
T Consensus 1702 GIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1702 GIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred hhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence 6 455655 8999999999999999999999999999755
|
|
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-26 Score=195.95 Aligned_cols=282 Identities=18% Similarity=0.153 Sum_probs=217.4
Q ss_pred cCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccc----cccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCc
Q 018094 33 RATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGH----EIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCD 107 (361)
Q Consensus 33 p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~----e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~ 107 (361)
.+++.++||||.+|.+..|--...+.-..+. -..|+.+|- .++|+|++ |+..++++||.|..
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g----------- 99 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWG----------- 99 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEE-----------
Confidence 3568999999999999876443333221111 112333332 67999999 56678999999962
Q ss_pred ccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCC--CCCccccc-ccchhhhhhhHHHHhhCCCC
Q 018094 108 SCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPE--GTPLDATA-PLLCAGITVYSPLRFYGLDK 182 (361)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~--~~~~~~aa-~l~~~~~~a~~~l~~~~~~~ 182 (361)
. -+|.+|..++.. ..++++. ++++.... .+..+.+|||..++.....+
T Consensus 100 ------------------------~---~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk 152 (343)
T KOG1196|consen 100 ------------------------I---VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPK 152 (343)
T ss_pred ------------------------e---ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCC
Confidence 1 279999999764 3444444 45555543 77889999999999999999
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH----HHHhc-CCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE----MQAAM-GTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~----~~~~~-~g~d~vid~~g 256 (361)
+|++|+|.|| |++|+++.|+||.+|++|+.++.++++..-+.++||.+..+||.++.. +++.. .|+|+.||.+|
T Consensus 153 ~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVG 232 (343)
T KOG1196|consen 153 KGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVG 232 (343)
T ss_pred CCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccC
Confidence 9999999987 999999999999999999999999999877777889998999987632 22222 38999999999
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCC-----c-ccChHHHhhCCcEEEecccCCH-----HHHHHHHHHHHcCCCceee
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKP-----L-ELPAFSLLMGRKIVGGSMIGGM-----KETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~-~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~l~~~~l~~~~ 325 (361)
+.. +...+..|+..||++.+|..+.. . --+....+.|++.+.|+..... +-++.+..++++|+++...
T Consensus 233 G~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e 311 (343)
T KOG1196|consen 233 GKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE 311 (343)
T ss_pred cHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence 987 89999999999999999986531 1 1233456789999988755332 3356677888899998776
Q ss_pred -EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 326 -EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 326 -~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
-.-+|+..+.||..|.++++.||.++++..
T Consensus 312 di~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 312 DIADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred hHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence 345699999999999999999999999865
|
|
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.4e-24 Score=164.01 Aligned_cols=108 Identities=36% Similarity=0.630 Sum_probs=93.2
Q ss_pred CCeEEEEEeeeccccchhhhhhCC-CCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCC
Q 018094 37 EKDVTFKVTHCGICHSDLHLIKNE-WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLEN 115 (361)
Q Consensus 37 ~~~vlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~ 115 (361)
|+|||||++++|||++|++.+.|. .....+|.++|||++|+|+++|+++++|++||||++.+.. .|+.|.+|+.+.++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~ 79 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN 79 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence 799999999999999999999983 4456889999999999999999999999999999887766 59999999999999
Q ss_pred CCcccccccccccCCCcccCCccceEEEeccCceEEC
Q 018094 116 YCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152 (361)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~i 152 (361)
.|++.... +....|+|+||+.+|++++++|
T Consensus 80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence 99876443 3447899999999999999975
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-16 Score=126.90 Aligned_cols=124 Identities=32% Similarity=0.507 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHHhh
Q 018094 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLL 268 (361)
Q Consensus 194 ~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l 268 (361)
++|++++|+||.+|++|++++++++++ ++++++|+++++++++.+ .++++++ ++|+||||+|+...++.+++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKL-ELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHH-HHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHH-HHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 589999999999999999999988775 566999999999987753 5556665 6999999999877899999999
Q ss_pred ccCCEEEEecCCC-CCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHc
Q 018094 269 KSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318 (361)
Q Consensus 269 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~ 318 (361)
+++|+++.+|... ....++...++.+++++.|+..++.++++++++++++
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 9999999999987 5678899999999999999999999999999998863
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.51 E-value=3e-13 Score=126.09 Aligned_cols=174 Identities=14% Similarity=0.047 Sum_probs=134.3
Q ss_pred hhHHHHhhCC-CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 171 VYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 171 a~~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
.|.++.+... ..+|++|+|+|+|.+|+.+++.++.+|++|+++..++.+. +.++++|++.+ + . .+...++|
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~-~~A~~~G~~~~-~---~---~e~v~~aD 259 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICA-LQAAMEGYEVM-T---M---EEAVKEGD 259 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhH-HHHHhcCCEEc-c---H---HHHHcCCC
Confidence 3555544433 4689999999999999999999999999999988777665 44578898543 1 1 12335789
Q ss_pred EEEEcCCCcccHHHH-HHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHH-HHH--HHHHHHHcCCC-cee
Q 018094 250 GIIDTVSAVHPLMPL-IGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK-ETQ--EMIDFAAKHNI-RAD 324 (361)
Q Consensus 250 ~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-~~~--~~~~~l~~~~l-~~~ 324 (361)
+||+++|+...+... +..++++|+++++|.. ...++...+..+++++.+++.+..+ +++ +.+++|++|.+ ...
T Consensus 260 VVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~ 337 (413)
T cd00401 260 IFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLG 337 (413)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCc
Confidence 999999998877776 9999999999999964 4578888888899999998876543 456 79999999987 332
Q ss_pred --e-EE-----Eecc-cHHHHHHHHHcCCCc-EEEEEEeC
Q 018094 325 --I-EV-----IPAD-YVNTALERLAKADVR-YRFVIDVA 354 (361)
Q Consensus 325 --~-~~-----~~l~-~~~~a~~~~~~~~~~-gkvvi~~~ 354 (361)
+ |. ++|+ ++.++++.+.++... -|+++.++
T Consensus 338 ~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 338 CATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred ccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 3 66 7888 999999998876543 46766554
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.5e-14 Score=112.43 Aligned_cols=117 Identities=30% Similarity=0.433 Sum_probs=78.5
Q ss_pred cCCcEEecCCCHHHHHHhcCCccEEEEcCC--CcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccC
Q 018094 227 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304 (361)
Q Consensus 227 ~g~~~v~~~~~~~~~~~~~~g~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~ 304 (361)
||+++++|++..+. ...+++|+|||++| ....+..++++| ++|+++.++. .+.......+...+.+....
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~ 72 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLF 72 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEE
Confidence 68999999986665 33468999999999 555446677778 9999999974 11111111122222222222
Q ss_pred -------CHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEE
Q 018094 305 -------GMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVI 351 (361)
Q Consensus 305 -------~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi 351 (361)
..+.++.+++++++|++++.+ ++||++++.+|++.+++++..||+|+
T Consensus 73 ~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 73 SVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp -H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 234599999999999999998 79999999999999999999999996
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-11 Score=117.85 Aligned_cols=142 Identities=19% Similarity=0.194 Sum_probs=106.9
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCH-------------HH---HHH
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQ-------------DE---MQA 243 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~~---~~~ 243 (361)
..++++|+|+|+|++|+++++.|+.+|++|++++.++++++ .++++|++.+ ++..++ +. ..+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 35799999999999999999999999999999999887764 5589999854 443221 11 111
Q ss_pred h-c---CCccEEEEcCCCc-----cc-HHHHHHhhccCCEEEEecCC-CCC--cccChHHHhh-CCcEEEecccCCHHHH
Q 018094 244 A-M---GTMDGIIDTVSAV-----HP-LMPLIGLLKSQGKLVLVGAP-EKP--LELPAFSLLM-GRKIVGGSMIGGMKET 309 (361)
Q Consensus 244 ~-~---~g~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~g~~~~~~~~~ 309 (361)
. . .++|++|+|++.+ .. .+.+++.++++|+++++|.. ++. .+.+...++. +++++.|......+..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p 320 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP 320 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence 1 2 4799999999973 24 38999999999999999985 343 3444455665 8999999876554444
Q ss_pred HHHHHHHHcCCCce
Q 018094 310 QEMIDFAAKHNIRA 323 (361)
Q Consensus 310 ~~~~~~l~~~~l~~ 323 (361)
.++.++++++.++.
T Consensus 321 ~~As~lla~~~i~l 334 (509)
T PRK09424 321 TQSSQLYGTNLVNL 334 (509)
T ss_pred HHHHHHHHhCCccH
Confidence 46899999987654
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.5e-07 Score=85.25 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=81.9
Q ss_pred hhhhhHHHHhhCCCC-CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcC
Q 018094 168 GITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG 246 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~-~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~ 246 (361)
.-.+|.++.+...+. .|++|+|+|.|.+|..+++.++.+|++|+++..++.+..++ ...|.. +.+ +.++..
T Consensus 195 ~~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~ 266 (425)
T PRK05476 195 GESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAE 266 (425)
T ss_pred HhhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHh
Confidence 344577776664444 89999999999999999999999999999998887765444 345654 221 223345
Q ss_pred CccEEEEcCCCcccHH-HHHHhhccCCEEEEecCCCC
Q 018094 247 TMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 247 g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 282 (361)
++|++|+++|....+. ..+..+++++.++++|....
T Consensus 267 ~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 267 LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 7999999999877665 57888999999999997654
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.2e-07 Score=85.97 Aligned_cols=121 Identities=23% Similarity=0.249 Sum_probs=85.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCC-------------HHH-------
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRD-------------QDE------- 240 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~-------------~~~------- 240 (361)
.++++|+|+|+|.+|+++++.++.+|++|++++.+.++. +.++++|++.+ ++..+ ++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rl-e~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVK-EQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 367899999999999999999999999999999888865 45578998763 22211 111
Q ss_pred HHHhcCCccEEEEcC---CCcc---cHHHHHHhhccCCEEEEecCCC-CCcccC--hHHHh-hCCcEEEeccc
Q 018094 241 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLVGAPE-KPLELP--AFSLL-MGRKIVGGSMI 303 (361)
Q Consensus 241 ~~~~~~g~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~-~~~~~~--~~~~~-~~~~~i~g~~~ 303 (361)
..+...++|++|+|+ |... ..+..++.+++++.+++++... +.++.. ...+. .+++.+.+...
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~n 313 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTD 313 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCC
Confidence 112234799999999 5433 4678899999999999997654 333322 11122 24588887654
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.57 E-value=6.1e-07 Score=80.60 Aligned_cols=168 Identities=18% Similarity=0.224 Sum_probs=97.8
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHH---HcCCcEE-ecCCCHHHHHHhcCCccEEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~g~d~vi 252 (361)
..++++++||.+|+|. |..+.++++..|. +|+.++.+++....+.+ +++...+ +...+.+.+....+.+|+|+
T Consensus 73 ~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi 151 (272)
T PRK11873 73 AELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVII 151 (272)
T ss_pred ccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEE
Confidence 3478999999999987 8888888888765 68888888776544322 2343322 11112111111123699998
Q ss_pred EcC------CCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCce---
Q 018094 253 DTV------SAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRA--- 323 (361)
Q Consensus 253 d~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~--- 323 (361)
... .....+..+.+.|+|+|+++..+..... .++ ..+.+.+.+.+..........++.+++.+..+..
T Consensus 152 ~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i 228 (272)
T PRK11873 152 SNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITI 228 (272)
T ss_pred EcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEE
Confidence 653 2233578899999999999987654322 111 1111222222111111123445666676643332
Q ss_pred ee-EEEecccHHHHHHHH--HcCCCcEEEE
Q 018094 324 DI-EVIPADYVNTALERL--AKADVRYRFV 350 (361)
Q Consensus 324 ~~-~~~~l~~~~~a~~~~--~~~~~~gkvv 350 (361)
.. +.++++++.++++.+ .++...++.+
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 229 QPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred EeccceecccHHHHHHHhccccccccCceE
Confidence 22 578899999999988 5555444444
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.1e-06 Score=76.70 Aligned_cols=111 Identities=19% Similarity=0.246 Sum_probs=83.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
.+++|+|+|.|.+|+.+++.++.+|++|++++++.++... ++++|.+.+ . .+.+.+...++|+||+++.......
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~-~~~~G~~~~-~---~~~l~~~l~~aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLAR-ITEMGLSPF-H---LSELAEEVGKIDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCeee-c---HHHHHHHhCCCCEEEECCChhhhhH
Confidence 6899999999999999999999999999999998776544 467887543 1 2233445568999999987655446
Q ss_pred HHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEe
Q 018094 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g 300 (361)
..++.+++++.+++++..++...+. ..-.++++..+
T Consensus 226 ~~l~~~~~g~vIIDla~~pggtd~~--~a~~~Gv~~~~ 261 (296)
T PRK08306 226 EVLSKMPPEALIIDLASKPGGTDFE--YAEKRGIKALL 261 (296)
T ss_pred HHHHcCCCCcEEEEEccCCCCcCee--ehhhCCeEEEE
Confidence 6778899999999998766554442 33346666664
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.4e-08 Score=96.38 Aligned_cols=160 Identities=16% Similarity=0.247 Sum_probs=106.7
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc
Q 018094 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148 (361)
Q Consensus 69 ~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 148 (361)
.-|.|+++.+.+|+++++. +|++.+.+ ||.|.+| ++.|...... |...++.|++++.++. .
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI--~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-~ 149 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI--LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-R 149 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH--HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-h
Confidence 4689999999999999876 45445544 7888888 4444433221 3356789999988875 3
Q ss_pred eEE---C-CCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHH
Q 018094 149 VVR---I-PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEA 223 (361)
Q Consensus 149 v~~---i-P~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~ 223 (361)
+.. + +..++. +..+.-.+..... ..++++|+|+|+|.+|..+++.++..| .+|+++.++.++..++
T Consensus 150 vr~~t~i~~~~vSv--------~~~Av~la~~~~~-~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~l 220 (417)
T TIGR01035 150 VRTETDISAGAVSI--------SSAAVELAERIFG-SLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDL 220 (417)
T ss_pred hhhhcCCCCCCcCH--------HHHHHHHHHHHhC-CccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 332 2 222221 1111111222222 367899999999999999999999999 4899999988877778
Q ss_pred HHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 224 IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 224 ~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
++++|...+ .. +...+...++|+||+|++....
T Consensus 221 a~~~g~~~i-~~---~~l~~~l~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 221 AKELGGEAV-KF---EDLEEYLAEADIVISSTGAPHP 253 (417)
T ss_pred HHHcCCeEe-eH---HHHHHHHhhCCEEEECCCCCCc
Confidence 788886432 22 2333444589999999988653
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.4e-06 Score=78.22 Aligned_cols=103 Identities=19% Similarity=0.140 Sum_probs=78.0
Q ss_pred hhHHHHhhCC-CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 171 VYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 171 a~~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
++.++.+... ...|++|+|+|.|.+|+.+++.++.+|++|+++..++.+..++ +..|.. +.+ . .+...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~---l---eeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMT---M---EEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCC---H---HHHHhcCC
Confidence 4555545433 3689999999999999999999999999999988777665444 455653 221 1 12235689
Q ss_pred EEEEcCCCcccHHH-HHHhhccCCEEEEecCCC
Q 018094 250 GIIDTVSAVHPLMP-LIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 250 ~vid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~ 281 (361)
++|++.|+...++. .+..+++++.++++|..+
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 99999999886664 888999999999998764
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.6e-06 Score=77.41 Aligned_cols=98 Identities=21% Similarity=0.257 Sum_probs=74.8
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCC---C--c
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS---A--V 258 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g---~--~ 258 (361)
+.+|+|+|+|.+|+.+++.++.+|++|++++++.++.+.+.+.++........+.+.+.+....+|++|++++ . +
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~p 246 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKAP 246 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCCC
Confidence 4559999999999999999999999999999888777666666765433334445555555668999999973 2 1
Q ss_pred c-cHHHHHHhhccCCEEEEecCCC
Q 018094 259 H-PLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 259 ~-~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
. .....++.+++++.+++++...
T Consensus 247 ~lit~~~l~~mk~g~vIvDva~d~ 270 (370)
T TIGR00518 247 KLVSNSLVAQMKPGAVIVDVAIDQ 270 (370)
T ss_pred cCcCHHHHhcCCCCCEEEEEecCC
Confidence 1 1367888899999999998654
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.8e-06 Score=77.65 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=77.8
Q ss_pred hHHHHhhCCC-CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018094 172 YSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 172 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~ 250 (361)
+.++.+...+ -.|++|+|+|.|.+|+.+++.++.+|++|+++..++.+..+. ...|...+ + +.+....+|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~vv----~---leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQVL----T---LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCeec----c---HHHHHhhCCE
Confidence 5555444333 679999999999999999999999999999988877654443 45566432 1 1223346899
Q ss_pred EEEcCCCcccH-HHHHHhhccCCEEEEecCCC
Q 018094 251 IIDTVSAVHPL-MPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 251 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 281 (361)
+|++.|+...+ ...++.|++++.++++|..+
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 99999988754 77999999999999999854
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=8.9e-07 Score=87.84 Aligned_cols=121 Identities=25% Similarity=0.224 Sum_probs=75.9
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc--------------------hhHHHHHHHcCCcEEecCCC-HH
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP--------------------SKKSEAIERLGADSFLVSRD-QD 239 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~--------------------~~~~~~~~~~g~~~v~~~~~-~~ 239 (361)
.+.|++|+|+|+|++|+++++.++..|++|+++...+ +...+.++++|++..++... .+
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~~ 213 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGED 213 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECCc
Confidence 5789999999999999999999999999999987532 22334457889876665432 11
Q ss_pred -HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecc
Q 018094 240 -EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSM 302 (361)
Q Consensus 240 -~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~ 302 (361)
.......++|+||+++|........+......|.+..++......... .....+++.+.|..
T Consensus 214 ~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~~l~~~~~~~-~~~~gk~v~ViGgg 276 (564)
T PRK12771 214 ITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVGEGE-PPFLGKRVVVIGGG 276 (564)
T ss_pred CCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHHHHHHHhhccC-CcCCCCCEEEECCh
Confidence 122334479999999998754333444445555555444321111111 12234666776643
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.19 E-value=9.1e-06 Score=74.32 Aligned_cols=109 Identities=20% Similarity=0.265 Sum_probs=79.1
Q ss_pred CceEECCCCCCcccccccchhhhhhhHHHHhhCCC---CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 018094 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD---KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE 222 (361)
Q Consensus 147 ~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~---~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~ 222 (361)
...+++|+.+..+.++... +...++.++...... -++++|+|+|+|.+|..+++.++..|. +|+++.++.++..+
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4567889998888776443 334445555433321 378999999999999999999998876 78888888888778
Q ss_pred HHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 223 AIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 223 ~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
+++++|... ++. +...+....+|+||.+++.+..
T Consensus 218 la~~~g~~~-~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGNA-VPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCeE-EeH---HHHHHHHhcCCEEEECCCCCch
Confidence 888998743 322 2233334568999999999874
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.9e-05 Score=73.63 Aligned_cols=126 Identities=13% Similarity=0.166 Sum_probs=87.2
Q ss_pred CceEECCCCCCccccc-ccchhhhhhhHHHHhh-CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 018094 147 HFVVRIPEGTPLDATA-PLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI 224 (361)
Q Consensus 147 ~~v~~iP~~~~~~~aa-~l~~~~~~a~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~ 224 (361)
-.++.+|+...-..+- ...+ ..+.+.++.+. ...-.|++|+|+|.|.+|..+++.++.+|++|+++.+.+.+....
T Consensus 216 iPV~nv~d~~tk~~aD~~~G~-~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A- 293 (476)
T PTZ00075 216 FPAINVNDSVTKSKFDNIYGC-RHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA- 293 (476)
T ss_pred ceEEEeCCcchHHHHHHHHHH-HHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-
Confidence 3567777765433332 2222 22233444333 333589999999999999999999999999999887776554333
Q ss_pred HHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH-HHHHhhccCCEEEEecCCC
Q 018094 225 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 225 ~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~ 281 (361)
...|+..+ + +.++...+|+|+.+.|..+.+. ..+..|++++.++++|...
T Consensus 294 ~~~G~~~~----~---leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~d 344 (476)
T PTZ00075 294 AMEGYQVV----T---LEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHFD 344 (476)
T ss_pred HhcCceec----c---HHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence 33465422 1 2334457999999999877664 7899999999999998764
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00015 Score=65.44 Aligned_cols=110 Identities=16% Similarity=0.209 Sum_probs=78.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
.|++++|+|.|.+|.+++..++.+|++|++..++.++..++ .++|...+ . .+.+.+...++|+||+++.....-.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIPF-P---LNKLEEKVAEIDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeee-c---HHHHHHHhccCCEEEECCChHHhCH
Confidence 57899999999999999999999999999999887665444 45565432 1 2334445568999999987653234
Q ss_pred HHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEE
Q 018094 263 PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG 299 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 299 (361)
..++.++++..+++++..++...+ ...-.++++..
T Consensus 225 ~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~ 259 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL 259 (287)
T ss_pred HHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence 567788999899999876554444 33334455544
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.07 E-value=5.4e-05 Score=64.95 Aligned_cols=76 Identities=18% Similarity=0.318 Sum_probs=61.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC----cEEecCCCHHH----HHHhc---CCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSFLVSRDQDE----MQAAM---GTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~----~~~~~---~g~d~ 250 (361)
.++.++|.|| +++|.+.++.+...|++|+++.++.+++++++.+++. -..+|-.+.+. +..+. +.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578899998 9999999999999999999999999999999999993 22455555443 33232 36999
Q ss_pred EEEcCCCc
Q 018094 251 IIDTVSAV 258 (361)
Q Consensus 251 vid~~g~~ 258 (361)
.++++|..
T Consensus 85 LvNNAGl~ 92 (246)
T COG4221 85 LVNNAGLA 92 (246)
T ss_pred EEecCCCC
Confidence 99999874
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.01 E-value=1.8e-05 Score=63.00 Aligned_cols=94 Identities=21% Similarity=0.384 Sum_probs=66.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
++.+++|+|+|.+|.+++..+...|+ +++++.|+.++..+++++++.. ..+...+ +.+....+|+||++++...
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSGM 87 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCCC
Confidence 68899999999999999999999999 5999999999988998888533 2233332 2233457999999988864
Q ss_pred cHHHHHHhhccC----CEEEEecCC
Q 018094 260 PLMPLIGLLKSQ----GKLVLVGAP 280 (361)
Q Consensus 260 ~~~~~~~~l~~~----G~~v~~g~~ 280 (361)
. ......+.+. +.+++++.+
T Consensus 88 ~-~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 88 P-IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp T-SSTHHHHTTTCHHCSEEEES-SS
T ss_pred c-ccCHHHHHHHHhhhhceeccccC
Confidence 2 1111223333 578888753
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.01 E-value=3.8e-05 Score=77.96 Aligned_cols=134 Identities=19% Similarity=0.203 Sum_probs=89.2
Q ss_pred CccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEe
Q 018094 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214 (361)
Q Consensus 136 g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~ 214 (361)
-++++|..+++..++.+ +..+.+++...... .....+|+++||+|+ |.+|...++.+...|++|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 55677888887777777 66666665411000 111246899999997 9999999999999999999999
Q ss_pred CCchhHHHHHHHcCC--c---EEecCCCHHHHHHh-------cCCccEEEEcCCCc------------------------
Q 018094 215 TSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMDGIIDTVSAV------------------------ 258 (361)
Q Consensus 215 ~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~g~d~vid~~g~~------------------------ 258 (361)
++.++...+.++++. . ...|..+.+.+.+. .+++|++|+++|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 998776666555553 1 12344554433322 24799999999832
Q ss_pred -ccHHHHHHhhcc---CCEEEEecCC
Q 018094 259 -HPLMPLIGLLKS---QGKLVLVGAP 280 (361)
Q Consensus 259 -~~~~~~~~~l~~---~G~~v~~g~~ 280 (361)
..++.++..+++ +|+++.++..
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 113334555655 6899999864
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.0001 Score=65.28 Aligned_cols=130 Identities=24% Similarity=0.275 Sum_probs=79.8
Q ss_pred cceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC
Q 018094 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (361)
Q Consensus 138 ~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~ 216 (361)
|.+|.. +...++.+++++++..+.. +.+.. ....+... ++++++||-+|+|. |..++.+++ .|+ +|+.++.+
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis 151 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTH-PTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID 151 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCC-HHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence 444533 6778899999998887652 22211 22333322 46889999999986 887776555 566 68888888
Q ss_pred chhHHHHHHH---cCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---cHHHHHHhhccCCEEEEecCC
Q 018094 217 PSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 217 ~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.....+.+. .+....+..... ...+|+|+.+..... .+..+.+.|+++|.++..|..
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~~------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQG------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEccC------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 7665433222 222111110000 015999997665432 245677889999999988654
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0011 Score=59.75 Aligned_cols=157 Identities=21% Similarity=0.097 Sum_probs=93.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHH-HCC-CeEEEEeCCchhHHHHHHHcCC-cEEecCCCHHHHHHhc-CCccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAK-AMG-VKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAM-GTMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~-~~g-~~Vi~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~-~g~d~vid~~g~ 257 (361)
..+.|+|.+| +-+++..+..++ ..+ .+++.+++... ..+++.+|. +.|+.|++-+ .+. ..--+++|++|+
T Consensus 135 ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N--~~Fve~lg~Yd~V~~Yd~i~---~l~~~~~~v~VDfaG~ 209 (314)
T PF11017_consen 135 GAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARN--VAFVESLGCYDEVLTYDDID---SLDAPQPVVIVDFAGN 209 (314)
T ss_pred CccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcc--hhhhhccCCceEEeehhhhh---hccCCCCEEEEECCCC
Confidence 3456777777 889998888888 444 48888887754 457789996 7788876543 332 467899999999
Q ss_pred cccHHHHHHhhccCC-EEEEecCCCCC-c------------ccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc-
Q 018094 258 VHPLMPLIGLLKSQG-KLVLVGAPEKP-L------------ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR- 322 (361)
Q Consensus 258 ~~~~~~~~~~l~~~G-~~v~~g~~~~~-~------------~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~- 322 (361)
.......-+.++..= ..+.+|..... . .+.....+.|.+.-.|......+.-+..-+++... ..
T Consensus 210 ~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~-~~w 288 (314)
T PF11017_consen 210 GEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADA-QPW 288 (314)
T ss_pred HHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh-cCc
Confidence 886666666665543 46677754311 1 11111122222322222211111111222333322 22
Q ss_pred eee-EEEecccHHHHHHHHHcCCC
Q 018094 323 ADI-EVIPADYVNTALERLAKADV 345 (361)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~ 345 (361)
..+ +.-+.+.++++++.+.+++.
T Consensus 289 l~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 289 LKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred EEEEEecCHHHHHHHHHHHhcCCC
Confidence 222 78899999999999988764
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00025 Score=67.71 Aligned_cols=161 Identities=21% Similarity=0.244 Sum_probs=99.3
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc
Q 018094 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148 (361)
Q Consensus 69 ~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 148 (361)
.-|||+++.+.+|+++++..-+|+.=+ |.+|+. .+..|..... .|...++.|++.+.++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI----------lgQvk~-a~~~a~~~g~-------~g~~l~~lf~~a~~~~--- 149 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI----------LGQVKD-AYALAQEAGT-------VGTILNRLFQKAFSVA--- 149 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH----------HHHHHH-HHHHHHHcCC-------chHHHHHHHHHHHHHH---
Confidence 459999999999999988755554332 233442 1112221110 0223456666655444
Q ss_pred eEECCCCCCcccccccchhhhhhhHHHHhhCC---CCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 018094 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI 224 (361)
Q Consensus 149 v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~---~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~ 224 (361)
..+..+.+. ...+...++.++..... -.++++|+|+|+|.+|.++++.++..|+ +|+++.++.++...++
T Consensus 150 -----k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la 223 (423)
T PRK00045 150 -----KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELA 223 (423)
T ss_pred -----hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 333222221 11122333444433321 2578999999999999999999999998 8888988888877788
Q ss_pred HHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 225 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 225 ~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
+++|.+ +++. +...+...++|+||+|++.+..
T Consensus 224 ~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 224 EEFGGE-AIPL---DELPEALAEADIVISSTGAPHP 255 (423)
T ss_pred HHcCCc-EeeH---HHHHHHhccCCEEEECCCCCCc
Confidence 888864 3322 2233334579999999998653
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00052 Score=66.94 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=72.3
Q ss_pred hCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--------C------CcE-EecCCCHHHH
Q 018094 178 YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------G------ADS-FLVSRDQDEM 241 (361)
Q Consensus 178 ~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~--------g------~~~-v~~~~~~~~~ 241 (361)
....+.|++|||.|+ |.+|...++.+...|++|++++++.++...+.+.+ | ... ..|..+.+.+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI 153 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI 153 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence 344578999999998 99999999999999999999999887765543321 2 111 2355566667
Q ss_pred HHhcCCccEEEEcCCCcc---------------cHHHHHHhhcc--CCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVH---------------PLMPLIGLLKS--QGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~~ 281 (361)
.+..+++|+||.++|... .....++.+.. .++||.++...
T Consensus 154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 676788999999988642 11223344433 36899887643
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0015 Score=60.83 Aligned_cols=99 Identities=25% Similarity=0.299 Sum_probs=78.6
Q ss_pred CEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcC--C-cEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG--A-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g--~-~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
.+|||+|+|.+|+.+++.+.+.+ .+|++++++.++..++....+ . ...+|-.+.+.+.++..++|+||+++.....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 46999999999999999988888 699999999888877744322 2 2346777777777888888999999999876
Q ss_pred HHHHHHhhccCCEEEEecCCCCC
Q 018094 261 LMPLIGLLKSQGKLVLVGAPEKP 283 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~~~~ 283 (361)
...+..|++.+=.|+.+......
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~~~ 104 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYEEP 104 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCCch
Confidence 76666777888889888765544
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00086 Score=59.12 Aligned_cols=78 Identities=14% Similarity=0.219 Sum_probs=60.5
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-----E--ecCCCHHHHHHhc-------C
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-----F--LVSRDQDEMQAAM-------G 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-----v--~~~~~~~~~~~~~-------~ 246 (361)
..+.++||.|| +++|...+..+...|.+++++.|+.+++.++.+++.-.+ + +|..+.+.+.++. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46789999998 999999999999999999999999999988877765321 2 3445554444332 2
Q ss_pred CccEEEEcCCCcc
Q 018094 247 TMDGIIDTVSAVH 259 (361)
Q Consensus 247 g~d~vid~~g~~~ 259 (361)
.+|+.++++|-..
T Consensus 84 ~IdvLVNNAG~g~ 96 (265)
T COG0300 84 PIDVLVNNAGFGT 96 (265)
T ss_pred cccEEEECCCcCC
Confidence 6999999998753
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0011 Score=57.87 Aligned_cols=99 Identities=18% Similarity=0.265 Sum_probs=66.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHcCCcEE-ecCCCHHHHHHh---cCCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSF-LVSRDQDEMQAA---MGTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~~g~~~v-~~~~~~~~~~~~---~~g~d~vid~~g 256 (361)
.++++||+|+ |.+|...++.+...|++|+++.+. .++..++.++++...+ .|..+.+.+.+. .+++|++|+++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4678999997 999999999999999999887653 4444555556665433 344454443332 246999999987
Q ss_pred Cccc-------------------------HHHHHHhhccCCEEEEecCCC
Q 018094 257 AVHP-------------------------LMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 257 ~~~~-------------------------~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.... ...++..++..|+++.++...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 134 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVN 134 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccc
Confidence 5310 123334456689999887643
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00069 Score=56.71 Aligned_cols=91 Identities=25% Similarity=0.319 Sum_probs=68.2
Q ss_pred EEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc----c
Q 018094 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH----P 260 (361)
Q Consensus 187 VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~----~ 260 (361)
|+|+|+ |.+|...++.+...|.+|+++++++++... ..+.+.+ .|..+.+.+.+...++|.||.++|... .
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689998 999999999999999999999999887654 3344433 345666777777789999999998522 2
Q ss_pred HHHHHHhhccCC--EEEEecCC
Q 018094 261 LMPLIGLLKSQG--KLVLVGAP 280 (361)
Q Consensus 261 ~~~~~~~l~~~G--~~v~~g~~ 280 (361)
....++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 455666665554 77777653
|
... |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0027 Score=51.45 Aligned_cols=96 Identities=20% Similarity=0.269 Sum_probs=65.6
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
...-.|++++|.|-|-+|.-.++.++.+|++|+++...+-+..++. .-|.... .+.++....|++|.++|..
T Consensus 18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~v~-------~~~~a~~~adi~vtaTG~~ 89 (162)
T PF00670_consen 18 NLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFEVM-------TLEEALRDADIFVTATGNK 89 (162)
T ss_dssp -S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-EEE--------HHHHTTT-SEEEE-SSSS
T ss_pred ceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcEec-------CHHHHHhhCCEEEECCCCc
Confidence 3346899999999999999999999999999999999887665553 2344321 2344556789999999987
Q ss_pred ccH-HHHHHhhccCCEEEEecCCCC
Q 018094 259 HPL-MPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 259 ~~~-~~~~~~l~~~G~~v~~g~~~~ 282 (361)
..+ ..-+..|+++-.++.+|..+.
T Consensus 90 ~vi~~e~~~~mkdgail~n~Gh~d~ 114 (162)
T PF00670_consen 90 DVITGEHFRQMKDGAILANAGHFDV 114 (162)
T ss_dssp SSB-HHHHHHS-TTEEEEESSSSTT
T ss_pred cccCHHHHHHhcCCeEEeccCcCce
Confidence 743 467888999999989986543
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00091 Score=56.44 Aligned_cols=99 Identities=27% Similarity=0.289 Sum_probs=70.3
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcCCcEEecCCCHHHHHHh-cCCccEEE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGADSFLVSRDQDEMQAA-MGTMDGII 252 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~---~~~~~~~g~~~v~~~~~~~~~~~~-~~g~d~vi 252 (361)
....++++++||=+|+| .|+.++-+++..+ +|+.+.+.++=. ....+.+|...|.....+-+.... ..+||.|+
T Consensus 66 ~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I~ 143 (209)
T COG2518 66 QLLELKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRII 143 (209)
T ss_pred HHhCCCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcCEEE
Confidence 44557999999999985 5899999999988 888888776511 122367887444322221111111 13799999
Q ss_pred EcCCCcccHHHHHHhhccCCEEEEe
Q 018094 253 DTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
-+++.+..-...++.|+++|+++.-
T Consensus 144 Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 144 VTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred EeeccCCCCHHHHHhcccCCEEEEE
Confidence 9999988678899999999998865
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0033 Score=55.92 Aligned_cols=106 Identities=17% Similarity=0.320 Sum_probs=73.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCcE-E----ecCCCHHHHH-------HhcC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGADS-F----LVSRDQDEMQ-------AAMG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~~-v----~~~~~~~~~~-------~~~~ 246 (361)
.+++|+|.|| +++|.+.+.-+-..|++++.+++..++.+... ++.+... + .|-.+.+.+. +..+
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 5789999998 99999999888899999988888877655442 3444322 2 2444444333 3345
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHHhhccC--CEEEEecCCCCCcccCh
Q 018094 247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQ--GKLVLVGAPEKPLELPA 288 (361)
Q Consensus 247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~ 288 (361)
++|+.++++|-.. ..+.++..|++. |+++.+++..+...++.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 8999999988653 224455666444 99999988776555444
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00067 Score=56.74 Aligned_cols=120 Identities=19% Similarity=0.318 Sum_probs=78.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.|.+|.|+|.|.+|+..+++++.+|++|++.++........ ..++.. ..+ +.++....|+|+.+.....
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~~----~~~---l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGVE----YVS---LDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTEE----ESS---HHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccce----eee---hhhhcchhhhhhhhhcccccc
Confidence 368999999999999999999999999999999998754322 344432 122 2233345899999877422
Q ss_pred ---cHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-EEEecccH
Q 018094 260 ---PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYV 333 (361)
Q Consensus 260 ---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~ 333 (361)
.-...+..|+++..+|+++..+ .-+-+.+++.|.+|++..-. ++|.-|.+
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aRG~------------------------~vde~aL~~aL~~g~i~ga~lDV~~~EP~ 159 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVARGE------------------------LVDEDALLDALESGKIAGAALDVFEPEPL 159 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSSGG------------------------GB-HHHHHHHHHTTSEEEEEESS-SSSSS
T ss_pred ceeeeeeeeeccccceEEEeccchh------------------------hhhhhHHHHHHhhccCceEEEECCCCCCC
Confidence 2345788899999999987521 01345667777788776432 44444433
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0017 Score=56.75 Aligned_cols=99 Identities=22% Similarity=0.345 Sum_probs=67.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC---CcEE--ecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSF--LVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g---~~~v--~~~~~~~~~~~~-------~~g~d 249 (361)
++++|||.|+ |.+|..+++.+...|++|+++++++++..++.+++. .-+. .|..+.+.+.++ .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999998 999999999999999999999998876655533332 1122 233443333221 24689
Q ss_pred EEEEcCCCcc-----------------------cHHHHHHhhccCCEEEEecCCC
Q 018094 250 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 250 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.++.+++... .++..+..++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999987521 1334455667789999988653
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0032 Score=51.90 Aligned_cols=98 Identities=20% Similarity=0.275 Sum_probs=69.9
Q ss_pred ccccchhhhhhhHHHHhhCCCCCCCEEEEEccch-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH
Q 018094 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 161 aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~-vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
....|+...++...++....--.+.+|+|+|+|. +|..++..++..|++|+++.+..+.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~-------------------- 80 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKN-------------------- 80 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchh--------------------
Confidence 3455666666666666655446889999999986 6999999999999998888865321
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+....+|+||.+++.++.+.. +.++++-.+++++.+.
T Consensus 81 -l~~~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr 119 (168)
T cd01080 81 -LKEHTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR 119 (168)
T ss_pred -HHHHHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence 12233458999999999774433 3467777777887654
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00094 Score=55.69 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=56.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEEecCCCHHHHH----Hh---cCCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQ----AA---MGTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~----~~---~~g~d~vi 252 (361)
.|.+|||.|+ +++|+..++-...+|-+||+..++.+++.+....... +.+.|..+.+..+ ++ ..-.++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4789999976 9999999999999999999999999998887544442 4455655544322 22 23589999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 98875
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0032 Score=56.41 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=54.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
++++++|.|+ |.+|...++.+...|++|++++++.++..++ ...+... ..|..+.+.+.++ .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999998 9999999999999999999999988766554 2334433 2355555443332 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9985
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0016 Score=57.75 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=78.6
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc------
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV------ 258 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~------ 258 (361)
.+|.|+|+|.+|.-++.+|--+|++|++.+.+.+|.+.+-..|+.....-++.+..+++...++|++|..+=-+
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaPk 248 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAPK 248 (371)
T ss_pred ccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCce
Confidence 45888899999999999999999999999999999887766677654445677788888778899998753221
Q ss_pred ccHHHHHHhhccCCEEEEecCCCC
Q 018094 259 HPLMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 259 ~~~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
...+...+.|+|++-++++....+
T Consensus 249 Lvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 249 LVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred ehhHHHHHhcCCCcEEEEEEEcCC
Confidence 235678999999999999976444
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0032 Score=56.26 Aligned_cols=97 Identities=18% Similarity=0.278 Sum_probs=74.2
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEccc-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag-~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..+....---.|++|+|+|.| .+|.-++.++...|++|++..+... .
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~ 194 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------D 194 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------h
Confidence 35678877777777766533589999999985 5999999999999999998876432 1
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+....+|+||.++|.+..+.. +.++++..++++|...
T Consensus 195 l~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 195 MASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 22334568999999999875554 4589998889998754
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0041 Score=52.74 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=56.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC----CcE-EecCCCHHHHHHhcCCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----ADS-FLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
++.+++|+|+ |.+|..++..+...|.+|+++.++.++...+++++. ... ..+..+.+.+.+...++|+||.++.
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 6788999997 999999988888889999999998887766655542 221 2233444545555568999999887
Q ss_pred Ccc
Q 018094 257 AVH 259 (361)
Q Consensus 257 ~~~ 259 (361)
...
T Consensus 107 ~g~ 109 (194)
T cd01078 107 AGV 109 (194)
T ss_pred CCc
Confidence 654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0051 Score=55.09 Aligned_cols=72 Identities=19% Similarity=0.231 Sum_probs=52.6
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHh-------cCCccEEEEcC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV 255 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~g~d~vid~~ 255 (361)
+++||.|+ |.+|...++.+...|++|++++++.++..++ ...+...+ .|..+.+.+.++ .+++|++|+++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 47899998 9999999999999999999999887665544 34454433 455555443332 24799999999
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 84
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0048 Score=54.89 Aligned_cols=75 Identities=17% Similarity=0.267 Sum_probs=55.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.++++... ..|..+.+.+.++ .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999997 999999999999999999999998877667766666321 1344554433322 2468999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 999885
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0052 Score=51.62 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=73.0
Q ss_pred CCCCEEEEEc-c-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHHh-------c-CCccE
Q 018094 182 KPGMHVGVVG-L-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------M-GTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~G-a-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~-~g~d~ 250 (361)
.....|||.| + |++|.+.+.-....|+.|+++.+..++...+..++|.. .-+|.++++.+.+. + +..|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 3567799987 4 99999999888899999999999999988887788863 33566665544432 2 36899
Q ss_pred EEEcCCCccc------------------------HHHHH--HhhccCCEEEEecCCCC
Q 018094 251 IIDTVSAVHP------------------------LMPLI--GLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 251 vid~~g~~~~------------------------~~~~~--~~l~~~G~~v~~g~~~~ 282 (361)
.++.+|.+=+ +..++ ...+..|++|.+|+..+
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE
Confidence 9998876420 11122 24588899999987544
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.008 Score=55.65 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=54.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
.+.++||+|+ |.+|..+++.+...|++|++++++.++..++.+ +.|.+.. .|..+.+.+.++ .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999998 999999999999999999999998776555433 3354322 355555444332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999985
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0078 Score=48.88 Aligned_cols=105 Identities=23% Similarity=0.274 Sum_probs=69.8
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccE
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~ 250 (361)
.++.....-..+.+++|+|+|.+|...++.+...| .+|+++.++.++..+++++++... .....+ ..+...++|+
T Consensus 8 ~a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 84 (155)
T cd01065 8 RALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADL 84 (155)
T ss_pred HHHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCE
Confidence 34444332245788999999999999999998886 689999998887777777776431 011112 1223467999
Q ss_pred EEEcCCCccc----HHHHHHhhccCCEEEEecCC
Q 018094 251 IIDTVSAVHP----LMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~~----~~~~~~~l~~~G~~v~~g~~ 280 (361)
|+.+++.... .......++++..++.++..
T Consensus 85 vi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~ 118 (155)
T cd01065 85 IINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN 118 (155)
T ss_pred EEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence 9999887541 11223456777788888654
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.001 Score=64.46 Aligned_cols=77 Identities=22% Similarity=0.386 Sum_probs=55.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch--------------------hHHHHHHHcCCcEEecCCCH-H-H
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRDQ-D-E 240 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~--------------------~~~~~~~~~g~~~v~~~~~~-~-~ 240 (361)
.+++|+|+|+|+.|+.++..++..|.+|+++...+. +..+..+++|.+..++..-. + .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 219 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDIS 219 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCccC
Confidence 678999999999999999999999999988876541 23344577887655443211 1 2
Q ss_pred HHHhcCCccEEEEcCCCcc
Q 018094 241 MQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~ 259 (361)
+..+..++|.||.++|...
T Consensus 220 ~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 220 LDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred HHHHHhcCCEEEEEeCCCC
Confidence 2233347999999999854
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0072 Score=53.09 Aligned_cols=75 Identities=20% Similarity=0.323 Sum_probs=54.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHH-------HhcCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQ-------AAMGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~-------~~~~g~d~v 251 (361)
+++++||.|+ |.+|...++.+...|++|++++++.++..+..++++.... .|..+.+.+. +..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999998 9999999999999999999999887766666666665321 2333433222 222478999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999875
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0065 Score=54.59 Aligned_cols=74 Identities=16% Similarity=0.273 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHh-------c-CCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------M-GTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~-~g~d~vi 252 (361)
.++++||+|+ |.+|...++.+...|++|++++++.++..++ ++.+...+ .|..+.+.+.++ . +.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4578999998 9999999999999999999999988776555 34454432 355554433221 1 3689999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 99874
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0083 Score=53.46 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=53.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcE---EecCCCHHHHHHh------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~------~~g~ 248 (361)
.++++||.|+ +++|.+.++.+...|++|++++++.++..++.+++ +.+. ..|-.+++.+.++ .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 5788999998 99999999999999999999999877665554443 3221 2344444433322 1469
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|+++.++|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999885
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0034 Score=59.35 Aligned_cols=92 Identities=18% Similarity=0.250 Sum_probs=66.2
Q ss_pred EEEEccchHHHHHHHHHHHCC-C-eEEEEeCCchhHHHHHHHc-CC---cEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMG-V-KVTVISTSPSKKSEAIERL-GA---DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g-~-~Vi~~~~~~~~~~~~~~~~-g~---~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
|+|+|+|.+|..+++.+...+ . +|++++++.++..++.+++ +. ...+|..+.+.+.++..+.|+|++|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 688999999999999998775 4 8999999998877776543 22 2235666777788888889999999998654
Q ss_pred HHHHHHhhccCCEEEEec
Q 018094 261 LMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g 278 (361)
...+..|++.+-.|++.+
T Consensus 81 ~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDTS 98 (386)
T ss_dssp HHHHHHHHHHT-EEEESS
T ss_pred HHHHHHHHHhCCCeeccc
Confidence 566777788888999843
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0038 Score=57.71 Aligned_cols=75 Identities=21% Similarity=0.336 Sum_probs=56.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcE---EecCCCHHHHHHhc-------CCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~~-------~g~ 248 (361)
.++++||+|+ |++|...++.+...|++|++++++.++..++.+ +.|.+. ..|..+.+.+.++. +++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4688999998 999999999999999999999998877655544 345432 23555555444332 579
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0053 Score=58.24 Aligned_cols=96 Identities=14% Similarity=0.221 Sum_probs=66.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
-.+.+|||+|+|.+|.+++..+...|+ +++++.++.++...++++++...++.. +...+....+|+||.|++.++.
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence 467899999999999999999999997 788888888888888888862222222 2334445679999999999874
Q ss_pred HHHHHHhhccCC-EEEEecCCC
Q 018094 261 LMPLIGLLKSQG-KLVLVGAPE 281 (361)
Q Consensus 261 ~~~~~~~l~~~G-~~v~~g~~~ 281 (361)
+-. .+.++... -+++++.+.
T Consensus 256 vi~-~~~~~~~~~~~iDLavPR 276 (414)
T PRK13940 256 IVT-CKYVGDKPRVFIDISIPQ 276 (414)
T ss_pred eEC-HHHhCCCCeEEEEeCCCC
Confidence 322 12222111 356776543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.013 Score=49.89 Aligned_cols=81 Identities=22% Similarity=0.160 Sum_probs=56.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
.|.+++|.|.|.+|..+++.+...|++|++.+.+.++..++.+.+|+..+ +.. + .....+|+++-|+.....-.
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~v-~~~--~---l~~~~~Dv~vp~A~~~~I~~ 100 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV-APE--E---IYSVDADVFAPCALGGVIND 100 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-cch--h---hccccCCEEEecccccccCH
Confidence 67899999999999999999999999999988888777777666675432 221 1 11125888886654443233
Q ss_pred HHHHhhc
Q 018094 263 PLIGLLK 269 (361)
Q Consensus 263 ~~~~~l~ 269 (361)
..++.++
T Consensus 101 ~~~~~l~ 107 (200)
T cd01075 101 DTIPQLK 107 (200)
T ss_pred HHHHHcC
Confidence 4445553
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0044 Score=54.35 Aligned_cols=75 Identities=21% Similarity=0.397 Sum_probs=57.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhc---CCccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAM---GTMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~---~g~d~vid~~g~ 257 (361)
.+.+++|+|+ |.+|...++.+...|.+|++++++.++..++.++++...+ .|..+.+.+.+.. +++|++|.++|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 5678999998 9999999999999999999999988776666666665432 3555555444432 468999999985
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0037 Score=55.89 Aligned_cols=83 Identities=19% Similarity=0.302 Sum_probs=58.9
Q ss_pred hHHHHhhC--CCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcE----EecCCCHHHHHHh
Q 018094 172 YSPLRFYG--LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS----FLVSRDQDEMQAA 244 (361)
Q Consensus 172 ~~~l~~~~--~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~----v~~~~~~~~~~~~ 244 (361)
+.+|.... ...++++++|+|+|+.+.+++.-++..|+ +++++.|+.++.+++++.++... .....+.+. .
T Consensus 112 ~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~---~ 188 (283)
T COG0169 112 LRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG---L 188 (283)
T ss_pred HHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc---c
Confidence 34455432 23468999999999999999999999997 89999999999888888776321 111111111 0
Q ss_pred cCCccEEEEcCCCc
Q 018094 245 MGTMDGIIDTVSAV 258 (361)
Q Consensus 245 ~~g~d~vid~~g~~ 258 (361)
. .+|++|+++...
T Consensus 189 ~-~~dliINaTp~G 201 (283)
T COG0169 189 E-EADLLINATPVG 201 (283)
T ss_pred c-ccCEEEECCCCC
Confidence 0 589999987764
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0041 Score=56.50 Aligned_cols=75 Identities=24% Similarity=0.345 Sum_probs=57.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEE---ecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v---~~~~~~~~~~~~-------~~g~d 249 (361)
.++++||+|+ |++|..+++.+...|++|++++++.++..++.++++. ... .|-.+.+.+.+. .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999997 9999999999999999999999988877777677653 211 355554433322 25799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999985
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.017 Score=49.39 Aligned_cols=114 Identities=18% Similarity=0.124 Sum_probs=69.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
.|.+|||+|+|.+|..-++.+...|++|++++.... ...++. +.|--..+. .+.. .....++++||-+.+....-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWLA-RCFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence 467999999999999999999999999999887643 223332 223111111 1111 12235799999999987533
Q ss_pred HHHHHhhccCCEEEEecCCCCC--cccChHHHhhCCcEEEec
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGS 301 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~ 301 (361)
.......+..|..+++...... +.++. .+-...+.+.-+
T Consensus 84 ~~i~~~a~~~~ilvn~~d~~e~~~f~~pa-~~~~g~l~iais 124 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVDDPELCSFIFPS-IVDRSPVVVAIS 124 (205)
T ss_pred HHHHHHHHHcCCEEEECCCcccCeEEEee-EEEcCCEEEEEE
Confidence 4455556677888876543332 23322 223345666444
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0055 Score=57.42 Aligned_cols=96 Identities=27% Similarity=0.424 Sum_probs=70.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
-.+.++||+|+|-+|..++..+...|. +++++.++.++..++++++|+..+ ..+.+......+|+||-+++.++.
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~----~l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV----ALEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee----cHHHHHHhhhhCCEEEEecCCCcc
Confidence 378889999999999999999999996 999999999999999999996543 223344445579999999998753
Q ss_pred H---HHHHHhhccC-C-EEEEecCCC
Q 018094 261 L---MPLIGLLKSQ-G-KLVLVGAPE 281 (361)
Q Consensus 261 ~---~~~~~~l~~~-G-~~v~~g~~~ 281 (361)
+ ......++.. . -+++++.+.
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCCC
Confidence 2 2233333332 2 456777654
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0025 Score=57.45 Aligned_cols=77 Identities=25% Similarity=0.255 Sum_probs=55.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.+++++|+|+|+.+.+++..+..+|+ +++++.++.++.++++++++... +......+.+......+|+||+|+....
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~ 202 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADV 202 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCC
Confidence 57889999999999999999999998 89999999888888887775321 1111111222233357999999987653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0087 Score=50.94 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=66.3
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHH---HHHcC-CcEE--ecCCCHHHHHHhcCCccE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEA---IERLG-ADSF--LVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~---~~~~g-~~~v--~~~~~~~~~~~~~~g~d~ 250 (361)
..+.++++||-+|+|. |.+++.+++..+ .+|+.++.+++....+ +++++ .+.+ +..+..+.+....+.+|.
T Consensus 36 l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~ 114 (198)
T PRK00377 36 LRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDR 114 (198)
T ss_pred cCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCE
Confidence 3468999999999987 888899988764 5899999887654332 34566 3322 222222333344467999
Q ss_pred EEEcCCCc---ccHHHHHHhhccCCEEEEe
Q 018094 251 IIDTVSAV---HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 251 vid~~g~~---~~~~~~~~~l~~~G~~v~~ 277 (361)
||...+.. ..+..+.+.|+++|+++..
T Consensus 115 V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 115 IFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred EEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 99865432 2466778889999999853
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0089 Score=52.51 Aligned_cols=75 Identities=21% Similarity=0.299 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHhc-------CCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~g~ 248 (361)
++.++||+|+ |.+|...+..+...|++|+++.++.++..++.+++ +... ..|-.+.+.+.++. +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 99999999999999999999988877655443332 3221 22444544433322 479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999986
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0069 Score=54.00 Aligned_cols=76 Identities=28% Similarity=0.353 Sum_probs=53.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++.++||.|+ |.+|...++.+...|++|++++++.++..+..+++ +... .+|..+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999998876654443333 3221 2355554433332 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 87 iD~vi~~ag~ 96 (264)
T PRK07576 87 IDVLVSGAAG 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999998863
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0085 Score=57.90 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~--~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~v 251 (361)
+++++||+|+ |.+|...++.+...|++|+++++.. ++..++.++++... .+|..+.+.+.++ .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999998 9999999999999999999988743 33444445566433 2455555433322 2368999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0077 Score=55.51 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=70.9
Q ss_pred CCCCEEEEEccchHHHHHHHHH-HHCCC-eEEEEeCCchhHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la-~~~g~-~Vi~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+...+++|+|+|..|.+.+..+ ...+. +|.+..++.++..++.+++ +.+. ....+ ..+.....|+|+.|+
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC---HHHHHhcCCEEEEcc
Confidence 4567899999999998777654 45676 8888888888877776644 4332 22223 223335799999999
Q ss_pred CCcccHHHHHHhhccCCEEEEecCCCCC-cccCh
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPA 288 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~ 288 (361)
++.+.+- . ..+++|-.+..+|..... .+++.
T Consensus 201 ~s~~p~i-~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 201 NAKTPVF-S-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred CCCCcch-H-HhcCCCcEEEecCCCCcccccCCH
Confidence 9876433 4 889999999999986543 45555
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.011 Score=54.13 Aligned_cols=75 Identities=23% Similarity=0.295 Sum_probs=54.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcE-EecCCCHHHHHHh-------cCCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~-------~~g~d~vi 252 (361)
.+.++||.|+ |.+|..++..+...|++|++++++.++..+..+++. ... ..|..+.+.+.++ .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4678999998 999999999999999999999998777655544443 221 2344555443332 24799999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
.++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99884
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.007 Score=54.78 Aligned_cols=76 Identities=16% Similarity=0.323 Sum_probs=52.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCc---hhHHHHHHHcCC---c---EEecCCCHHHHHHhcCCccEE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSP---SKKSEAIERLGA---D---SFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~---~~~~~~~~~~g~---~---~v~~~~~~~~~~~~~~g~d~v 251 (361)
-.+++++|+|+|++|.+++..+...|++ |+++.++. ++.+++++++.. . ...+..+.+.+.+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 3578899999999999999888889995 99998886 555565555521 1 112333333344444568999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
++++.-
T Consensus 204 INaTp~ 209 (289)
T PRK12548 204 VNATLV 209 (289)
T ss_pred EEeCCC
Confidence 998753
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0052 Score=55.29 Aligned_cols=94 Identities=20% Similarity=0.249 Sum_probs=64.0
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
..+.+++|+|+|.+|.+++..++..| .+|+++.++.++.++++++++...-+.. +. ...+....+|+||+++.....
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~~~DivInaTp~g~~ 198 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELADFDLIINATSAGMS 198 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccccCCEEEECCcCCCC
Confidence 45778999999999999999999999 5999999998887777776653210111 00 111233579999999876431
Q ss_pred H-----HHHHHhhccCCEEEEe
Q 018094 261 L-----MPLIGLLKSQGKLVLV 277 (361)
Q Consensus 261 ~-----~~~~~~l~~~G~~v~~ 277 (361)
- ......++++..++++
T Consensus 199 ~~~~~~~~~~~~l~~~~~v~Di 220 (278)
T PRK00258 199 GELPLPPLPLSLLRPGTIVYDM 220 (278)
T ss_pred CCCCCCCCCHHHcCCCCEEEEe
Confidence 0 1123556777777666
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0061 Score=46.40 Aligned_cols=94 Identities=28% Similarity=0.327 Sum_probs=60.8
Q ss_pred CCCEEEEEccchHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHHc---CC--cEEecCCCHHHHHHhcCCccEEEEcC-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERL---GA--DSFLVSRDQDEMQAAMGTMDGIIDTV- 255 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~-~~g~~Vi~~~~~~~~~~~~~~~~---g~--~~v~~~~~~~~~~~~~~g~d~vid~~- 255 (361)
|+.+||-+|+|. |.+++.+++ ..+++|+.++.+++....+.+.+ +. ...+...+........+++|+|+...
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 79 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF 79 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence 578899999854 667777777 57889999999987665554444 22 21122222211122234799999987
Q ss_pred CCc---c------cHHHHHHhhccCCEEEEe
Q 018094 256 SAV---H------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 256 g~~---~------~~~~~~~~l~~~G~~v~~ 277 (361)
... . .++...+.|+|+|+++.-
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 222 1 256788899999998753
|
... |
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.01 Score=51.67 Aligned_cols=75 Identities=23% Similarity=0.265 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC---cEE--ecCCCHHHHHH----h---cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSF--LVSRDQDEMQA----A---MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~v--~~~~~~~~~~~----~---~~g~d 249 (361)
.+.++||+|+ |.+|...++.+...|++|++++++.++..++.+++.. -+. .|..+.+.+.. + .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999997 9999999999888899999999988776666555531 111 23344433222 1 24799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999875
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0073 Score=53.45 Aligned_cols=75 Identities=21% Similarity=0.265 Sum_probs=55.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.+++|||+|+ |.+|...++.+...|++|++++++.++.....++++... ..|..+++.+.++ .+++|++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999998 999999999999999999999988776555555555432 2355555443332 246899999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.014 Score=52.83 Aligned_cols=128 Identities=21% Similarity=0.209 Sum_probs=72.8
Q ss_pred cCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 018094 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI 224 (361)
Q Consensus 146 ~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~ 224 (361)
...++.+.+++.+....- +.+.+ +...+... .+++++||-+|+|. |..++.+++ .|+ +|+.++.++.....+.
T Consensus 126 ~~~~i~ldpg~aFgtG~h-~tt~l-~l~~l~~~--~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~ 199 (288)
T TIGR00406 126 DALIIMLDPGLAFGTGTH-PTTSL-CLEWLEDL--DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESAR 199 (288)
T ss_pred CcEEEEECCCCcccCCCC-HHHHH-HHHHHHhh--cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHH
Confidence 345666777766544321 11111 12223322 36789999999877 777777666 465 8999988876543332
Q ss_pred H---HcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCc---ccHHHHHHhhccCCEEEEecCC
Q 018094 225 E---RLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 225 ~---~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+ ..+... +..... +......++||+|+...... ..+..+.+.|+++|.++..|..
T Consensus 200 ~n~~~n~~~~~~~~~~~-~~~~~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 200 KNAELNQVSDRLQVKLI-YLEQPIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred HHHHHcCCCcceEEEec-ccccccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 2 223221 111111 11111234799999865443 2345677899999999988753
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.012 Score=57.87 Aligned_cols=99 Identities=18% Similarity=0.276 Sum_probs=70.6
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~ 250 (361)
..++++||.|+ +++|...++.+...|++|+++.++.++..++.++++... ..|..+++.+.++ .+.+|+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999997 999999999999999999999998887777766666432 2355554433322 246999
Q ss_pred EEEcCCCcc--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 251 IIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+|.++|... ..+.++..++.+|+++.++..
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 999988531 122234455667999999764
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0034 Score=51.95 Aligned_cols=96 Identities=24% Similarity=0.316 Sum_probs=63.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC-C-----------------C--HHHHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-R-----------------D--QDEMQ 242 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~-~-----------------~--~~~~~ 242 (361)
+..+|+|+|+|.+|+.|+.+++.+|++|++.+...++..+. +..+...+... . . ...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34679999999999999999999999999999988776555 55565433221 0 1 11223
Q ss_pred HhcCCccEEEEcCC-----Cc-ccHHHHHHhhccCCEEEEecC
Q 018094 243 AAMGTMDGIIDTVS-----AV-HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 243 ~~~~g~d~vid~~g-----~~-~~~~~~~~~l~~~G~~v~~g~ 279 (361)
+....+|++|-+.- .+ ...+..++.|+++.-++++..
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 33346899885321 11 124678888999998998864
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.012 Score=52.17 Aligned_cols=76 Identities=21% Similarity=0.318 Sum_probs=56.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---C-C-cEEecCCCHHHHH-------HhcCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-A-DSFLVSRDQDEMQ-------AAMGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g-~-~~v~~~~~~~~~~-------~~~~g~d 249 (361)
+|+.|||.|+ +++|.+.++=...+|+++++.+.+.+...+.+++. | + ..+.|-++.+.+. +..+.+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 6899999997 89999888888888999999998887665555544 3 2 3456666654433 3335799
Q ss_pred EEEEcCCCc
Q 018094 250 GIIDTVSAV 258 (361)
Q Consensus 250 ~vid~~g~~ 258 (361)
++++.+|--
T Consensus 117 ILVNNAGI~ 125 (300)
T KOG1201|consen 117 ILVNNAGIV 125 (300)
T ss_pred EEEeccccc
Confidence 999998864
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.018 Score=51.02 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=53.5
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-Cc---EEecCCCHHHHHHh--------cCCccEE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD---SFLVSRDQDEMQAA--------MGTMDGI 251 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~---~v~~~~~~~~~~~~--------~~g~d~v 251 (361)
+++||.|+ |.+|...++.+...|++|++++++.++..++.+.++ .. ...|-.+.+.+.+. .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 46899997 999999999998999999999998887766655544 11 12354554433322 3468999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
+.++|..
T Consensus 82 i~~ag~~ 88 (260)
T PRK08267 82 FNNAGIL 88 (260)
T ss_pred EECCCCC
Confidence 9999863
|
|
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0057 Score=59.72 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=54.5
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+.++++|+|+|.|.+|++++.+++..|++|++.+...++... ++++|...+...+..+.+ ..+|+|+.+.|.+.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~-l~~~g~~~~~~~~~~~~l----~~~D~VV~SpGi~~ 82 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRP-HAERGVATVSTSDAVQQI----ADYALVVTSPGFRP 82 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHhCCCEEEcCcchHhHh----hcCCEEEECCCCCC
Confidence 457899999999999999999999999999998876555443 466787443222222222 35799999988764
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0052 Score=55.40 Aligned_cols=72 Identities=21% Similarity=0.403 Sum_probs=52.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC----cEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
..+.+|+|+|+|++|.+++..+...|+ +++++.++.++.+.++++++. ..+.... .+.+....+|+||+|+.
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence 356789999999999999999999998 899999998887777766532 1222211 12223356999999954
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0023 Score=48.24 Aligned_cols=90 Identities=24% Similarity=0.255 Sum_probs=61.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
.|.+|||+|+|.+|..-++.+...|++|+++.... +..+ +.-.... +. ......++++||.+.+....-.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~----~~~~--~~i~~~~-~~---~~~~l~~~~lV~~at~d~~~n~ 75 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI----EFSE--GLIQLIR-RE---FEEDLDGADLVFAATDDPELNE 75 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE----HHHH--TSCEEEE-SS----GGGCTTESEEEE-SS-HHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch----hhhh--hHHHHHh-hh---HHHHHhhheEEEecCCCHHHHH
Confidence 57889999999999999999999999999999886 2212 2211111 11 1223458999999999877444
Q ss_pred HHHHhhccCCEEEEecCCCC
Q 018094 263 PLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~ 282 (361)
......+..|.++.+...+.
T Consensus 76 ~i~~~a~~~~i~vn~~D~p~ 95 (103)
T PF13241_consen 76 AIYADARARGILVNVVDDPE 95 (103)
T ss_dssp HHHHHHHHTTSEEEETT-CC
T ss_pred HHHHHHhhCCEEEEECCCcC
Confidence 55556677899999876544
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.012 Score=51.75 Aligned_cols=97 Identities=20% Similarity=0.298 Sum_probs=62.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...+..+...|.+|+++.++.+ +...+.++ .+.+. ..|..+.+.+..+ .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4678999998 99999999999889999999887653 23333222 23221 2344554443322 136
Q ss_pred ccEEEEcCCCcc-------------------cHHHHHHhhccCCEEEEecC
Q 018094 248 MDGIIDTVSAVH-------------------PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------~~~~~~~~l~~~G~~v~~g~ 279 (361)
+|+++.++|... .++.+...+...|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 899998886531 22334445556689988865
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.017 Score=56.97 Aligned_cols=75 Identities=23% Similarity=0.388 Sum_probs=57.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||+|+ +.+|...++.+...|++|+++.++.++..++.++++... ..|..+++.+.++ .+++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5788999997 999999999999999999999998888777777776532 2455555443332 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 999875
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.02 Score=51.35 Aligned_cols=75 Identities=17% Similarity=0.244 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ + ++|.+.++.+...|++|+++.++.+ +..++.+++|.... .|-.+.+.+.++ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 4688999998 4 8999999999999999999877642 22333344453322 344554433322 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999984
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.018 Score=47.69 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=65.4
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhH---HHHHHHcCCcEE--ecCCCHHHHHHhcCCccEEEE
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKK---SEAIERLGADSF--LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~---~~~~~~~g~~~v--~~~~~~~~~~~~~~g~d~vid 253 (361)
.+++|+.++=+|+| .|..++++++.. ..+|+++.+++++. +..+++||.+.+ +....++.+..+. .+|.+|-
T Consensus 31 ~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFI 108 (187)
T COG2242 31 RPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFI 108 (187)
T ss_pred CCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEE
Confidence 36899977668874 355566777554 35999999987753 344568997643 3333344433322 6999997
Q ss_pred cCCCc--ccHHHHHHhhccCCEEEEecC
Q 018094 254 TVSAV--HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 254 ~~g~~--~~~~~~~~~l~~~G~~v~~g~ 279 (361)
--|.. ..++.++..|+++|++|.-..
T Consensus 109 GGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 109 GGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 65532 246779999999999987643
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.01 Score=53.17 Aligned_cols=103 Identities=21% Similarity=0.129 Sum_probs=67.1
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC---cEEecCCCHHHHHHhcCCc
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DSFLVSRDQDEMQAAMGTM 248 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~g~ 248 (361)
..++........+++++|+|+|.+|.+++..+...|.+|+++.++.++.+++++++.. ...+. .+. .....+
T Consensus 105 ~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~--~~~~~~ 179 (270)
T TIGR00507 105 VSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS---MDE--LPLHRV 179 (270)
T ss_pred HHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec---hhh--hcccCc
Confidence 3344432333557889999999999999998888899999999988877777666542 11111 111 112468
Q ss_pred cEEEEcCCCccc--H---HHHHHhhccCCEEEEecC
Q 018094 249 DGIIDTVSAVHP--L---MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 249 d~vid~~g~~~~--~---~~~~~~l~~~G~~v~~g~ 279 (361)
|+||+|++.... . ......++++..++++.-
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 999999886420 1 012345677777777743
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.015 Score=52.20 Aligned_cols=95 Identities=18% Similarity=0.195 Sum_probs=66.2
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEccch-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHH
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~-vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 242 (361)
.+++..+....++....--.|++|+|+|.|. +|...+.++...|++|++.-+... .+ .
T Consensus 139 ~p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L------------------~ 197 (283)
T PRK14192 139 GSATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NL------------------P 197 (283)
T ss_pred cCCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hH------------------H
Confidence 3444444445555544345889999999965 999999999999998887765321 12 1
Q ss_pred HhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 243 ~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+....+|++|.++|.+..+. .+.++++..++++|...
T Consensus 198 ~~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 198 ELVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP 234 (283)
T ss_pred HHhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence 22246899999998776333 35689999999998543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.014 Score=51.58 Aligned_cols=74 Identities=23% Similarity=0.310 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCc---E-EecCCCHHHHHHhc-------C
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD---S-FLVSRDQDEMQAAM-------G 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~---~-v~~~~~~~~~~~~~-------~ 246 (361)
.++++||.|+ |.+|...+..+...|++|+++.++.++..++.+++ +.. . ..|-.+.+.+.++. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4688999998 99999999999999999999998877665554444 221 1 23555554443322 3
Q ss_pred CccEEEEcCC
Q 018094 247 TMDGIIDTVS 256 (361)
Q Consensus 247 g~d~vid~~g 256 (361)
++|++|.+++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999986
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.018 Score=51.65 Aligned_cols=98 Identities=16% Similarity=0.212 Sum_probs=65.8
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADS--FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ +++|.++++.+...|++|+++.++. ++..++.++++... ..|-.+.+.+.++ .+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4688999986 4899999999999999999988774 23344444555432 2355554433322 247
Q ss_pred ccEEEEcCCCcc-----------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 248 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 248 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+|++++++|... ..+..+..++.+|+++.++..
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 145 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL 145 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence 999999998421 123355567778999988754
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0082 Score=52.96 Aligned_cols=74 Identities=22% Similarity=0.324 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
.++++||.|+ |.+|...++.+...|++|++++++.....+.. ..+.. ...|-.+.+.+.+..+++|++|+++|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN-DESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh-ccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4678999997 99999999999999999999988763221111 11111 224555666666666789999999985
|
|
| >PRK07340 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.014 Score=53.11 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=73.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
....+++|+|+|..|.+.+..+.. .+. +|.+..++.++...+++++... .+. . +...+...++|+|+.++.+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEEEEccCC
Confidence 466789999999999999988865 675 7888999888888887776421 111 1 1223344689999999888
Q ss_pred cccHHHHHHhhccCCEEEEecCCCC-CcccChHH
Q 018094 258 VHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS 290 (361)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~ 290 (361)
..-+-.. .++|+-.+..+|.... ..+++...
T Consensus 199 ~~Pl~~~--~~~~g~hi~~iGs~~p~~~El~~~~ 230 (304)
T PRK07340 199 RTPVYPE--AARAGRLVVAVGAFTPDMAELAPRT 230 (304)
T ss_pred CCceeCc--cCCCCCEEEecCCCCCCcccCCHHH
Confidence 7644344 3789999999997654 34666543
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.018 Score=54.22 Aligned_cols=113 Identities=25% Similarity=0.205 Sum_probs=73.1
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~v~~~~~~~~ 240 (361)
..+..+....+..+.....+++|++||-+|+| .|.++..+++..|++|+.++.+++....+.+... ...-+...+
T Consensus 146 ~~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--- 221 (383)
T PRK11705 146 DTLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQD--- 221 (383)
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECc---
Confidence 34555555566666566667999999999985 5667788888889999999988876654433321 111111111
Q ss_pred HHHhcCCccEEEEc-----CCC---cccHHHHHHhhccCCEEEEec
Q 018094 241 MQAAMGTMDGIIDT-----VSA---VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 241 ~~~~~~g~d~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 278 (361)
...+.+.+|.|+.. +|. ...+..+.+.|+|+|.++...
T Consensus 222 ~~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 222 YRDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12234579998753 232 133667888999999998753
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.017 Score=50.72 Aligned_cols=75 Identities=19% Similarity=0.274 Sum_probs=53.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC--Cc---EEecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--AD---SFLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~-------~~g~d 249 (361)
.+.++||+|+ |.+|...++.+...|.+|++++++.++..++...+. .. ...|..+.+.+..+ .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4568999998 999999999999999999999999877665544443 11 12244444443322 23689
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999885
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.033 Score=49.75 Aligned_cols=72 Identities=21% Similarity=0.304 Sum_probs=50.7
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE----EecCCCHHHHHHh-------cCCccE
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS----FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~----v~~~~~~~~~~~~-------~~g~d~ 250 (361)
++||+|+ |.+|...++.+...|++|+++.++.++..+..++ .+... ..|-.+++.+.+. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 6899997 9999999999999999999998887665444333 23321 2455554433322 246899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|.++|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999985
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.01 Score=52.61 Aligned_cols=77 Identities=19% Similarity=0.312 Sum_probs=55.3
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc----EEecCCCHHHHHHh-------cCCcc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~-------~~g~d 249 (361)
-++.++||.|+ |.+|...++.+...|.+|+++.++.+...++.+++... ...|..+++.+.+. .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999998 99999999999999999999999876665554443322 12344444433322 24799
Q ss_pred EEEEcCCCc
Q 018094 250 GIIDTVSAV 258 (361)
Q Consensus 250 ~vid~~g~~ 258 (361)
+||.++|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999998864
|
|
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.019 Score=52.93 Aligned_cols=104 Identities=17% Similarity=0.232 Sum_probs=70.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHH-HCCC-eEEEEeCCchhHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~-~~g~-~Vi~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+...+++|+|+|..+.+.+..+. ..+. +|.+..++.++.+++++++ |.+ +....+ +.+...++|+|+.++
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~---~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATD---PRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCC---HHHHhccCCEEEEec
Confidence 45678999999999988888776 4776 7999999988887777765 432 222222 333345799999998
Q ss_pred CCcccHHHHHHhhccCCEEEEecCCCC-CcccChHH
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS 290 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~ 290 (361)
+....+ -..+.++++-.+..+|.... ..+++...
T Consensus 203 ~s~~p~-i~~~~l~~g~~i~~vg~~~p~~rEld~~~ 237 (326)
T TIGR02992 203 PSETPI-LHAEWLEPGQHVTAMGSDAEHKNEIDPAV 237 (326)
T ss_pred CCCCcE-ecHHHcCCCcEEEeeCCCCCCceecCHHH
Confidence 875422 22345788888888886533 34555443
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.03 Score=49.39 Aligned_cols=75 Identities=21% Similarity=0.322 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...++.+...|.+|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999997 99999999999889999999999887665544333 3321 2344454443322 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.+++.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.034 Score=44.31 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=71.0
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
.+++...+....++....--.|++|+|+|. ..+|.-.+.++...|++|++..+.....+
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------- 66 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------- 66 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence 456666666666766543358999999996 89999999999999999988875432221
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+....+|+|+-++|....+. .+.+++|-.++.+|...
T Consensus 67 -~~v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 67 -SKVHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK 103 (140)
T ss_pred -HHHhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence 22345899999999886443 44599999999887643
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.023 Score=52.11 Aligned_cols=94 Identities=20% Similarity=0.259 Sum_probs=64.4
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHhcCCccEEEEcCCCccc---
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAMGTMDGIIDTVSAVHP--- 260 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~g~d~vid~~g~~~~--- 260 (361)
+|||+|+ |.+|...+..+...|.+|++++++.++...+ +..+.+.+. |..+.+.+.+...++|+||.+++....
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6999998 9999999999988999999999886543322 334554332 445566666767789999998764210
Q ss_pred ---------HHHHHHhhccCC--EEEEecCC
Q 018094 261 ---------LMPLIGLLKSQG--KLVLVGAP 280 (361)
Q Consensus 261 ---------~~~~~~~l~~~G--~~v~~g~~ 280 (361)
....+++++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 123445554444 88887653
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.012 Score=52.32 Aligned_cols=75 Identities=23% Similarity=0.274 Sum_probs=54.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
+++++||.|+ |.+|...++.+...|++|++++++.++..++.++++... ..|-.+.+.+.+. .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4678999997 999999999999999999999998877766666655321 1244444333221 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999884
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.023 Score=51.99 Aligned_cols=98 Identities=21% Similarity=0.194 Sum_probs=65.9
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHH---HHHHcCCcEEec-CCCHHHHHHhcCCccEEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSE---AIERLGADSFLV-SRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~---~~~~~g~~~v~~-~~~~~~~~~~~~g~d~vi 252 (361)
..++++++||.+|+| .|..++.+++..+. +|+.++.+++.... .+++.|.+.+.. ..+..........+|+|+
T Consensus 76 L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii 154 (322)
T PRK13943 76 VGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIF 154 (322)
T ss_pred cCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEE
Confidence 446889999999997 59999999998764 68888877664322 223466643322 222111111113699999
Q ss_pred EcCCCcccHHHHHHhhccCCEEEEe
Q 018094 253 DTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
.+.+.........+.|+++|+++..
T Consensus 155 ~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 155 VTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ECCchHHhHHHHHHhcCCCCEEEEE
Confidence 9888766566788899999998763
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.018 Score=51.87 Aligned_cols=75 Identities=19% Similarity=0.321 Sum_probs=52.3
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC----cEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
..+++++|+|+|+.+.+++..+...|+ +++++.++.++.+++++++.. ..+. ..+..........+|+|+|++.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~-~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV-GVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE-ecCHhHHHHHHhhcCEEEEcCC
Confidence 347889999999999999998888998 888999988887777766531 1111 1111111222346899999876
Q ss_pred C
Q 018094 257 A 257 (361)
Q Consensus 257 ~ 257 (361)
.
T Consensus 204 ~ 204 (283)
T PRK14027 204 M 204 (283)
T ss_pred C
Confidence 4
|
|
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0072 Score=61.05 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=56.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch--------------------hHHHHHHHcCCcEEecCCC--HHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD--QDE 240 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~--------------------~~~~~~~~~g~~~v~~~~~--~~~ 240 (361)
.+++|+|+|+|+.|+.++..++..|.+|+++.+.+. ...+..+++|.+..++..- .-.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~~ 388 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDIT 388 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcCC
Confidence 489999999999999999999999999999887652 1334556788765544321 112
Q ss_pred HHHhcCCccEEEEcCCCc
Q 018094 241 MQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~ 258 (361)
+..+..++|.||.++|..
T Consensus 389 ~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 389 FSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred HHHHHhcCCEEEEeCCCC
Confidence 334456899999999975
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0088 Score=54.29 Aligned_cols=76 Identities=21% Similarity=0.345 Sum_probs=53.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE-E--ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-F--LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~g~ 248 (361)
.+.++||+|+ |.+|...++.+...|++|++++++.++.+++.+++ +... . .|-.+.+.+.++ .+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999997 99999999999889999999999887665554433 3321 1 244444433322 2479
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|.++|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999998853
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.011 Score=52.55 Aligned_cols=75 Identities=19% Similarity=0.257 Sum_probs=53.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCc-E--EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD-S--FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +.. . ..|..+++.+.++ .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999998 99999999999999999999999877655554433 322 1 2355555544322 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.034 Score=48.34 Aligned_cols=102 Identities=14% Similarity=0.215 Sum_probs=64.6
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe---EEEEeCC----chhH-------HHHHHHcCCcEEecCCC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK-------SEAIERLGADSFLVSRD 237 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~---Vi~~~~~----~~~~-------~~~~~~~g~~~v~~~~~ 237 (361)
..+++....--.+.+++|+|+|..|..++..+...|++ ++++++. .++. .+++++++... .+ .
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-~- 89 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-G- 89 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc-C-
Confidence 44555444324678999999999999999999999975 8888887 3332 34445554221 11 1
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEec
Q 018094 238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 278 (361)
.+.+...++|++|++++........++.+++...+..+.
T Consensus 90 --~l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 90 --TLKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred --CHHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 122222458999999974332345667777776666554
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.022 Score=51.37 Aligned_cols=75 Identities=15% Similarity=0.237 Sum_probs=49.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHHHHcCCc-----EEecCCCHHHHHHhcCCccEEEE
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAIERLGAD-----SFLVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~---~~~~~~~~~~g~~-----~v~~~~~~~~~~~~~~g~d~vid 253 (361)
.++++||+|+|+.+.+++..+...|+ +++++.++. ++.+.++++++.. .+....+.+.+......+|+|++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivIN 202 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN 202 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEE
Confidence 56789999999889988777777887 888888884 3666666666421 11111111112223347899999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++..
T Consensus 203 aTp~ 206 (288)
T PRK12749 203 GTKV 206 (288)
T ss_pred CCCC
Confidence 8754
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.012 Score=52.54 Aligned_cols=74 Identities=22% Similarity=0.356 Sum_probs=54.7
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcE-EecCCCHHHHH-------HhcCCccEEEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQ-------AAMGTMDGIID 253 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~-------~~~~g~d~vid 253 (361)
+.++||+|+ |.+|...++.+...|++|+++.++.++..++.++++ ... ..|..+.+.+. +..+++|++|.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999998 999999999888899999999998877766656655 322 23555544332 22357999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9885
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.032 Score=49.37 Aligned_cols=75 Identities=16% Similarity=0.308 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...++.+...|++|+++.++.++..++.++ .+.+.. .|-.+.+.+.+. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999999999999999988665554443 343322 244444433322 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999885
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.01 Score=50.79 Aligned_cols=103 Identities=29% Similarity=0.327 Sum_probs=63.7
Q ss_pred HhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhH---HHHHHHcCCcEE-ecCCCHHHHHHhcCCcc
Q 018094 176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKK---SEAIERLGADSF-LVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~---~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d 249 (361)
.....+++|++||-+|+| .|+.++.+++..|. +|+.+...++-. .+.+++++.+.+ +...+...-.....+||
T Consensus 65 l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD 143 (209)
T PF01135_consen 65 LEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFD 143 (209)
T ss_dssp HHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEE
T ss_pred HHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcC
Confidence 344558999999999874 47888888888775 677777665422 223345566432 22222211111234799
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEE-ecC
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVL-VGA 279 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~-~g~ 279 (361)
.|+-+.+....-...++.|+++|+++. ++.
T Consensus 144 ~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~~ 174 (209)
T PF01135_consen 144 RIIVTAAVPEIPEALLEQLKPGGRLVAPIGQ 174 (209)
T ss_dssp EEEESSBBSS--HHHHHTEEEEEEEEEEESS
T ss_pred EEEEeeccchHHHHHHHhcCCCcEEEEEEcc
Confidence 999998887756788899999999987 443
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.011 Score=50.52 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=59.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
.|.+|||+|+|.+|...+..+...|++|+++.....+ ..++.++ +. ..+.....+ .....++|+||-+++.+. +
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~~~--~~~l~~adlViaaT~d~e-l 83 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE-GK-IRWKQKEFE--PSDIVDAFLVIAATNDPR-V 83 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC-CC-EEEEecCCC--hhhcCCceEEEEcCCCHH-H
Confidence 5789999999999999999888899999988754322 2222222 21 111111111 112347999999999887 6
Q ss_pred HHHHHhhccCCEEEEecCCC
Q 018094 262 MPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~ 281 (361)
+..+...+..+.++++...+
T Consensus 84 N~~i~~~a~~~~lvn~~d~~ 103 (202)
T PRK06718 84 NEQVKEDLPENALFNVITDA 103 (202)
T ss_pred HHHHHHHHHhCCcEEECCCC
Confidence 66555554556677775533
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.031 Score=49.69 Aligned_cols=75 Identities=15% Similarity=0.243 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ + ++|.+.++.+...|++|+++.++.. ...++.+++|.... .|-.+.+.+.++ .+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999997 4 7999999888889999998876632 22333333453322 355555433322 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++++++|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998874
|
|
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.029 Score=50.06 Aligned_cols=96 Identities=16% Similarity=0.182 Sum_probs=72.0
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEccc-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag-~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...||+..+.+..++...---.|++|+|+|.| .+|.-.+.++...|++|++.-+....
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~--------------------- 193 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKD--------------------- 193 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHH---------------------
Confidence 35678877777777766533479999999985 99999999999999999876433211
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 194 l~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 194 LSFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 2233445899999999987443 4467999999999864
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.017 Score=54.77 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=54.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC--CcE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG--ADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g--~~~-v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
.+++++|.|+ |.+|.+.+..+...|++|+++++++++..+..+..+ ... ..|..+.+.+.+..+++|++|.++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 4679999998 999999999998899999999987765433222211 111 23556666666666789999998875
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.032 Score=50.05 Aligned_cols=96 Identities=21% Similarity=0.325 Sum_probs=61.9
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh------cCCccEE
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA------MGTMDGI 251 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~------~~g~d~v 251 (361)
++++||.|+|.+|...+..+. .|++|++++++.++..++.+++ +.+. ..|-.+.+.+.++ .+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 357888999999999998885 7999999998876655444333 3321 1344454433322 2479999
Q ss_pred EEcCCCccc------------------HHHHHHhhccCCEEEEecCC
Q 018094 252 IDTVSAVHP------------------LMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 252 id~~g~~~~------------------~~~~~~~l~~~G~~v~~g~~ 280 (361)
|.++|.... ++.....++++|+++.++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 999986321 22234455667877777653
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.013 Score=52.06 Aligned_cols=75 Identities=20% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|..+++.+.++ .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678999997 99999999999999999999999877666555443 2211 1244444433322 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999884
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.041 Score=50.02 Aligned_cols=98 Identities=13% Similarity=0.175 Sum_probs=62.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHcCCcEE---ecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----KSEAIERLGADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-----~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|...+..+...|++|+++.++.+. ..+.+++.|.... .|..+.+.+.++ .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4678999997 999999999999999999887664321 1122234454322 244444433322 24
Q ss_pred CccEEEEcCCCcc--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++|++|.++|... .++.++..++++|+++.++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~ 193 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI 193 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence 7999999988421 112344455678899988764
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.023 Score=50.82 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=72.7
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...||+..+....++...---.|++|+|+|. +.+|.-.+.++...|++|++.-+... .
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~ 194 (285)
T PRK14189 136 LFRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------D 194 (285)
T ss_pred CCcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------C
Confidence 3567877777777776653358999999997 66799999999999999987543221 1
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+....+|+|+-++|....+.. +.++++..++++|...
T Consensus 195 l~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin~ 233 (285)
T PRK14189 195 LAAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMNR 233 (285)
T ss_pred HHHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEccccc
Confidence 22334458999999998875443 7799999999999643
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.044 Score=48.61 Aligned_cols=75 Identities=21% Similarity=0.336 Sum_probs=50.5
Q ss_pred CCCEEEEEccc---hHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSF--LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Gag---~vG~~a~~la~~~g~~Vi~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|++ ++|.+.++.+...|++|+++.++.+. ..++.++++.... .|-.+.+.+.++ .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999963 89999999999999999998877532 2334344443222 344444333322 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++++++|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 9999999874
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.036 Score=50.76 Aligned_cols=88 Identities=26% Similarity=0.368 Sum_probs=65.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.|+++-|+|.|.||++.++.++.+|.+|+...+... .+..+++++.++ + +.++....|++.-........
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T~ 215 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV----D---LDELLAESDIISLHCPLTPETR 215 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec----c---HHHHHHhCCEEEEeCCCChHHh
Confidence 589999999999999999999999999999998864 233245555543 1 334445688887765543212
Q ss_pred ----HHHHHhhccCCEEEEecC
Q 018094 262 ----MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~g~ 279 (361)
...++.|++++.+|+++.
T Consensus 216 hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCC
Confidence 347778999999999975
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.032 Score=45.50 Aligned_cols=91 Identities=16% Similarity=0.089 Sum_probs=58.1
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-.|.+|||+|+|.+|..-++.+...|++|+++. ++...++ ++++.... ..+..+ ..-..++|+||-+++... +
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~~-~~~~~~--~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYITW-KQKTFS--NDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcEE-EecccC--hhcCCCceEEEECCCCHH-H
Confidence 367889999999999999999988999999884 3333444 34442111 111100 111247999999998877 6
Q ss_pred HHHHHhhccCCEEEEecC
Q 018094 262 MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~ 279 (361)
+..+...++.+.++....
T Consensus 84 N~~i~~~a~~~~~vn~~d 101 (157)
T PRK06719 84 NMMVKQAAHDFQWVNVVS 101 (157)
T ss_pred HHHHHHHHHHCCcEEECC
Confidence 665555544444555443
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.025 Score=50.88 Aligned_cols=96 Identities=19% Similarity=0.147 Sum_probs=73.8
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+....++...---.|++|.|+|. +.+|.-.+.++...|++|++..+....
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~--------------------- 195 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD--------------------- 195 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------
Confidence 3567887777777776654357999999998 699999999999999999998654321
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+....+|+||-++|....+...+ ++++..++++|..
T Consensus 196 l~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 196 AKALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 2233445899999999987555544 8999999999854
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.012 Score=53.91 Aligned_cols=75 Identities=20% Similarity=0.195 Sum_probs=53.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----C-CcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-ADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g-~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.+++++|.|+ +++|..++..+...|++|++++++.++..++.+++ + ... ..|-.+.+.++++ .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4688999998 99999999999999999999999887665554433 1 111 2355555443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
.+|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 69999999875
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.056 Score=49.55 Aligned_cols=103 Identities=26% Similarity=0.227 Sum_probs=67.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
+...+++|+|+|..|.+.+..+.. .+. +|++..++.++..++++++... .+....+ ..+...++|+|+.+++.
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~---~~~av~~aDIVi~aT~s 199 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTD---LEAAVRQADIISCATLS 199 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCC---HHHHHhcCCEEEEeeCC
Confidence 567889999999999999865544 564 8999999988888887776321 1111122 23334579999998887
Q ss_pred cccHHHHHHhhccCCEEEEecCCCC-CcccCh
Q 018094 258 VHPLMPLIGLLKSQGKLVLVGAPEK-PLELPA 288 (361)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 288 (361)
...+- -.+.++++-.+..+|.... ..+++.
T Consensus 200 ~~pvl-~~~~l~~g~~i~~ig~~~~~~~El~~ 230 (314)
T PRK06141 200 TEPLV-RGEWLKPGTHLDLVGNFTPDMRECDD 230 (314)
T ss_pred CCCEe-cHHHcCCCCEEEeeCCCCcccccCCH
Confidence 54211 1256788877667775443 234554
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.017 Score=47.04 Aligned_cols=97 Identities=20% Similarity=0.301 Sum_probs=63.8
Q ss_pred ccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH
Q 018094 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 161 aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
-..+||+..+.+..++...---.|++|+|+|. ..+|.-.+.++...|++|++.-+..+...
T Consensus 13 ~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~------------------ 74 (160)
T PF02882_consen 13 PGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ------------------ 74 (160)
T ss_dssp TSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH------------------
T ss_pred CCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc------------------
Confidence 35677888888888877654468999999997 78999999999999999988665543322
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+..+|+|+-++|.+..+. .+.++++..++++|..
T Consensus 75 ---~~~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 75 ---EITRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGIN 110 (160)
T ss_dssp ---HHHTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred ---ceeeeccEEeeeeccccccc--cccccCCcEEEecCCc
Confidence 22345799999999877443 3468999888998864
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.019 Score=50.99 Aligned_cols=75 Identities=27% Similarity=0.281 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHH----Hh---cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQ----AA---MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~----~~---~~g~d~v 251 (361)
+++++||.|+ |.+|...++.+...|++|+++.++.++..++.+..+... ..|..+.+.+. +. .+.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4688999997 999999999999999999999988776666544444321 12444433222 21 2478999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999874
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.038 Score=49.04 Aligned_cols=75 Identities=19% Similarity=0.320 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CCc-EE--ecCCCHHHHHHh------cCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GAD-SF--LVSRDQDEMQAA------MGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~------~~g~d~ 250 (361)
++.++||+|+ |.+|...+..+...|++|++++++.++..++.+++ +.. .. .|-.+.+.+..+ .+.+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999997 99999999999999999999999877665554443 211 11 244444333222 246899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
++.++|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999886
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.026 Score=50.15 Aligned_cols=77 Identities=19% Similarity=0.318 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcc-c-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCcEE----ecCCCHHHHHHh------
Q 018094 181 DKPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF----LVSRDQDEMQAA------ 244 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g-~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~------ 244 (361)
+..++++||.|+ | ++|.+.++.+...|++|++++++.++..+..++ ++...+ .|..+.+.+.++
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 346789999997 6 799999999999999999998877655444332 343222 244454433322
Q ss_pred -cCCccEEEEcCCC
Q 018094 245 -MGTMDGIIDTVSA 257 (361)
Q Consensus 245 -~~g~d~vid~~g~ 257 (361)
.+++|++|.++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 2478999999985
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.05 Score=48.73 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=53.1
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~vi 252 (361)
+.++||.|+ |.+|...++.+...|.+|++++++.++..++.+.++... -.|..+.+.+.+. .+++|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 467999997 999999999988889999999998877666545444321 1244444333221 24789999
Q ss_pred EcCCCc
Q 018094 253 DTVSAV 258 (361)
Q Consensus 253 d~~g~~ 258 (361)
.++|..
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 999864
|
|
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.031 Score=49.88 Aligned_cols=95 Identities=20% Similarity=0.207 Sum_probs=72.7
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+..+.+..++...---.|++|+|+|- ..+|.-.+.++...|++|++.-+.... +
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence 467887788887776653347999999997 569999999999999999887654321 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.+....+|++|.++|.+..+.. +.++++..++++|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 2334558999999999874443 678999999999854
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.016 Score=51.61 Aligned_cols=75 Identities=20% Similarity=0.287 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CC-c---EEecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GA-D---SFLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~-~---~v~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ +.+|...++.+...|++|++++++.++..+..+++ +. . ...|-.+.+.+.++ .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4788999998 99999999999999999999999877655443332 11 1 12344554433322 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.021 Score=51.20 Aligned_cols=76 Identities=18% Similarity=0.225 Sum_probs=54.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++...+.+..+... ..|..+.+.+.++ .+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999998 999999999999999999999998877655544333221 2344555443332 2368999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
+.++|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9999863
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.022 Score=50.30 Aligned_cols=76 Identities=18% Similarity=0.305 Sum_probs=54.4
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHH----Hh---cCCccE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQ----AA---MGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~----~~---~~g~d~ 250 (361)
..|.++||.|+ |.+|...+..+...|++|++++++.++..++.++++... ..|-.+.+.+. ++ .+.+|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35788999997 999999999999899999999887766656555665322 23444444332 22 236899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|.++|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999885
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.017 Score=51.06 Aligned_cols=76 Identities=25% Similarity=0.313 Sum_probs=54.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCc-E--EecCCCHHHHHHh-------cCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD-S--FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~g 247 (361)
..++++||.|+ |.+|..++..+...|++|+++.++.++..++..++ +.. . ..|..+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45789999997 99999999999999999999999887765554332 211 1 2344444433332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999984
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.066 Score=47.07 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=51.9
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEEEc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGIIDT 254 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~vid~ 254 (361)
+++|.|+ |.+|...+..+...|++|++++++.++..++.+.++... ..|-.+.+.+.+. .+++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 5899997 999999999999999999999998877666555555432 1244444433322 2479999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 875
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.065 Score=41.28 Aligned_cols=97 Identities=19% Similarity=0.273 Sum_probs=62.7
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHH---HHHcCCcE--EecCCCHHHHHHhcCCccEEEE
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEA---IERLGADS--FLVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~---~~~~g~~~--v~~~~~~~~~~~~~~g~d~vid 253 (361)
.+.++++||-+|+|. |..+..+++..+ .+|+.++.+......+ +++++... ++..+-.+......+.+|+|+-
T Consensus 16 ~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~ 94 (124)
T TIGR02469 16 RLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFI 94 (124)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEE
Confidence 356788888899876 888888888865 5899998887654333 23344432 2211111111222357999997
Q ss_pred cCCCcc---cHHHHHHhhccCCEEEEe
Q 018094 254 TVSAVH---PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 254 ~~g~~~---~~~~~~~~l~~~G~~v~~ 277 (361)
...... .++.+.+.|+++|.++..
T Consensus 95 ~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 95 GGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 654322 477799999999999865
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.02 Score=51.51 Aligned_cols=76 Identities=18% Similarity=0.323 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHhc-------CCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~g~ 248 (361)
.+.++||+|+ |.+|...++.+...|++|++++++.++..+..+++ +... ..|..+.+.+.++. +++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999997 99999999999999999999998776655554443 3322 12444444443322 368
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|.++|..
T Consensus 85 d~vi~~Ag~~ 94 (287)
T PRK06194 85 HLLFNNAGVG 94 (287)
T ss_pred CEEEECCCCC
Confidence 9999999863
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.016 Score=53.38 Aligned_cols=75 Identities=20% Similarity=0.245 Sum_probs=53.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC---cE---EecCCCHHHHHHhc-------CCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DS---FLVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~---v~~~~~~~~~~~~~-------~g~ 248 (361)
.+.++||.|+ |.+|..+++.+...|++|++++++.++..++.+++.. .. ..|-.+.+.+.+.. +++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4678999997 9999999999988999999999988776666555531 11 13444544333221 359
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 85 D~li~nAg~ 93 (322)
T PRK07453 85 DALVCNAAV 93 (322)
T ss_pred cEEEECCcc
Confidence 999999883
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.027 Score=50.32 Aligned_cols=77 Identities=17% Similarity=0.248 Sum_probs=55.5
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~ 250 (361)
+.+++... ...+++++|+|+|+.+.+++..++..|+ +++++.++.++.+.+++.++... . +.. ....+|+
T Consensus 111 ~~~L~~~~-~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~dl 181 (272)
T PRK12550 111 AKLLASYQ-VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEADI 181 (272)
T ss_pred HHHHHhcC-CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCCE
Confidence 44454433 3456689999999999999999999998 79999999988888877765321 1 111 1135899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
|++|+..
T Consensus 182 vINaTp~ 188 (272)
T PRK12550 182 LVNVTPI 188 (272)
T ss_pred EEECCcc
Confidence 9999764
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.019 Score=50.66 Aligned_cols=75 Identities=25% Similarity=0.384 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|+++.++.++..++.+++ |... ..|..+.+.+.++ .+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999997 99999999999889999999998877655443333 3221 1244554443332 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999985
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.019 Score=50.76 Aligned_cols=75 Identities=12% Similarity=0.211 Sum_probs=54.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|+++.++.++.+++.+++ +.+. ..|-.+.+.+.++ .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4788999998 99999999999999999999999877665554443 3221 2344454433322 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|+++.++|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999875
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.017 Score=50.28 Aligned_cols=75 Identities=21% Similarity=0.381 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcEE-ecCCCHHHHHH-------hcCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF-LVSRDQDEMQA-------AMGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~v-~~~~~~~~~~~-------~~~g~d~ 250 (361)
++.++||+|+ |.+|...++.+...|++|++++++.++..+..+++ +...+ .|..+.+.+.+ ..+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999998 99999999999888999999999776544333332 22221 23344333322 2247999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|.++|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.023 Score=50.15 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=52.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCc--E-EecCCCHHHHHHhc-CCccEEEEcC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD--S-FLVSRDQDEMQAAM-GTMDGIIDTV 255 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~--~-v~~~~~~~~~~~~~-~g~d~vid~~ 255 (361)
+.++||.|+ |.+|..+++.+...|++|++++++.++..++.. ..+.. . ..|..+.+.+.+.. .++|++|.++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 457999998 999999999999999999999988665444322 22322 1 23555555555544 4899999998
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 84
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.024 Score=50.93 Aligned_cols=75 Identities=21% Similarity=0.330 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--c---EEecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~g~d 249 (361)
.++++||.|+ |.+|...++.+...|++|+++++..+...++.++++. . ...|-.+.+.+.++ .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999997 9999999998888999999998877665555555532 1 12344555444332 24799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999875
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.026 Score=49.55 Aligned_cols=75 Identities=23% Similarity=0.451 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHH----h---cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQA----A---MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~----~---~~g~ 248 (361)
+++++||.|+ |.+|...++.+...|++|++++++.++..+..++ .+... ..|-.+.+.+.+ . .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4778999997 9999999999999999999999887665444333 24331 233344333322 1 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999884
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.02 Score=51.46 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=53.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..+..+++ +... ..|-.+.+.+.++ .+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999999999999999998877665554443 3322 2344454443332 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999884
|
|
| >PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.033 Score=50.18 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=71.7
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..|+...---.|++|+|+| .+.+|.-.+.++...|++|++..+....
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~--------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD--------------------- 194 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC---------------------
Confidence 356788777777777654335799999999 5999999999999999999887422211
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+....+|+|+-++|....+...+ +++|..++++|..
T Consensus 195 l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin 232 (296)
T PRK14188 195 LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGIN 232 (296)
T ss_pred HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence 1223345799999999987555433 8999999999864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.02 Score=50.57 Aligned_cols=75 Identities=21% Similarity=0.326 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +.+.. .|-.+.+.+.++ .+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 99999999999999999999999887765554443 33221 244444433322 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999985
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.018 Score=56.28 Aligned_cols=97 Identities=25% Similarity=0.356 Sum_probs=66.0
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
+.+|+|+|+|.+|.+++..+...|+ +|+++.++.++...+.++++...+ .....+...+...++|+||.+++....
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pvI 344 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPLF 344 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCee
Confidence 6889999999999999999999997 799999998888888777742211 111222333445689999999877652
Q ss_pred HHHHHHhhcc----CC---EEEEecCCC
Q 018094 261 LMPLIGLLKS----QG---KLVLVGAPE 281 (361)
Q Consensus 261 ~~~~~~~l~~----~G---~~v~~g~~~ 281 (361)
....++.+.+ .+ .+++++.+.
T Consensus 345 ~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 345 LKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred CHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 2233333322 12 467777653
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.021 Score=50.39 Aligned_cols=75 Identities=21% Similarity=0.318 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +.. ...|..+.+.+.+. .+.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 5678999997 99999999999999999999998876655554443 321 12344444433322 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999999875
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.025 Score=48.99 Aligned_cols=71 Identities=23% Similarity=0.268 Sum_probs=52.4
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhc----CCccEEEEcCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAM----GTMDGIIDTVS 256 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~----~g~d~vid~~g 256 (361)
+++|.|+ |.+|...++.+...|++|+++.++.++..++.++++...+ .|..+.+.+.++. +.+|++++++|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4889987 9999999999998999999999988776666566554432 3555554444332 36899999876
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.028 Score=49.01 Aligned_cols=74 Identities=15% Similarity=0.129 Sum_probs=51.5
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHH----Hh---cCCccEEEEc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---MGTMDGIIDT 254 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~----~~---~~g~d~vid~ 254 (361)
++++||.|+ |.+|...++.+...|++|++++++.++..+..++.+...+ .|..+.+.+. ++ .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 467999997 9999999999999999999999876654444445554322 3444433322 22 2469999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 875
|
|
| >COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.051 Score=49.75 Aligned_cols=109 Identities=18% Similarity=0.206 Sum_probs=74.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+...++.|+|+|..+.+.++.++. ++. ++.+..++++..+.+++.+......+....+..++...+.|+|+-|+.+..
T Consensus 128 ~da~~laiIGaG~qA~~ql~a~~~v~~~~~I~i~~r~~~~~e~~a~~l~~~~~~~v~a~~s~~~av~~aDiIvt~T~s~~ 207 (330)
T COG2423 128 KDASTLAIIGAGAQARTQLEALKAVRDIREIRVYSRDPEAAEAFAARLRKRGGEAVGAADSAEEAVEGADIVVTATPSTE 207 (330)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhhCCccEEEEEcCCHHHHHHHHHHHHhhcCccceeccCHHHHhhcCCEEEEecCCCC
Confidence 456778899999999999999886 455 899999999887777654332111111112233455678999999988866
Q ss_pred cHHHHHHhhccCCEEEEecCCC-CCcccChHHH
Q 018094 260 PLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSL 291 (361)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~ 291 (361)
--...+.|+++-.+..+|... +...++...+
T Consensus 208 -Pil~~~~l~~G~hI~aiGad~p~k~Eld~e~l 239 (330)
T COG2423 208 -PVLKAEWLKPGTHINAIGADAPGKRELDPEVL 239 (330)
T ss_pred -CeecHhhcCCCcEEEecCCCCcccccCCHHHH
Confidence 334556789999999998743 3345555443
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.051 Score=47.88 Aligned_cols=99 Identities=14% Similarity=0.216 Sum_probs=61.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHc---CCcE---EecCCCHHH-------HHH----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERL---GADS---FLVSRDQDE-------MQA---- 243 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~-~~~~~~~~~~~~~---g~~~---v~~~~~~~~-------~~~---- 243 (361)
.++++||.|+ |.+|.++++.+...|++|++.. +..++..+...++ +... ..|-.+.+. +.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4678999997 9999999999999999998875 4444433333322 3221 123333221 111
Q ss_pred hcC--CccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCCC
Q 018094 244 AMG--TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 244 ~~~--g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
..+ ++|+++.++|... ..+.++..+++.|+++.++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~ 147 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 147 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence 112 6999999988421 0122455566779999987643
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.074 Score=39.19 Aligned_cols=86 Identities=22% Similarity=0.370 Sum_probs=60.0
Q ss_pred EEEEEccchHHHHHHHHHHHCC---CeEEEE-eCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g---~~Vi~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
+|.|+|+|.+|.+.+.-+...| .+|+++ .+++++..++.++++..... .+..+.+. ..|+||-|+-... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~----~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAAQ----EADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHHH----HTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhhc----cCCEEEEEECHHH-H
Confidence 4677899999999999999999 799966 88888888888888865432 12223332 5899999998876 4
Q ss_pred HHHHHh---hccCCEEEEe
Q 018094 262 MPLIGL---LKSQGKLVLV 277 (361)
Q Consensus 262 ~~~~~~---l~~~G~~v~~ 277 (361)
...++. ..++..++++
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 444433 4566666665
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.08 Score=46.96 Aligned_cols=75 Identities=16% Similarity=0.246 Sum_probs=49.9
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHcC-CcE---EecCCCHHHHHH----h---c
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLG-ADS---FLVSRDQDEMQA----A---M 245 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~---~~~~~~~~~~g-~~~---v~~~~~~~~~~~----~---~ 245 (361)
.++++||.|+ +++|.++++.+...|++|+++.++. ++..++.+++. ... ..|-.+.+.+.+ + .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 4688999996 5999999999999999999987542 33444545442 221 234445443322 2 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++++++|.
T Consensus 86 g~ld~lv~nag~ 97 (257)
T PRK08594 86 GVIHGVAHCIAF 97 (257)
T ss_pred CCccEEEECccc
Confidence 469999998874
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.027 Score=50.45 Aligned_cols=74 Identities=15% Similarity=0.307 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ +.+|...++.+...|++|+++.++ ++..+..+++ +.. ...|-.+.+.+.++ .+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 4678999998 999999999999999999999988 5544444433 322 12344454433322 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999875
|
|
| >COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.094 Score=44.88 Aligned_cols=118 Identities=17% Similarity=0.057 Sum_probs=74.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
.|..|||+|+|.+|..=+.++...|++|+++.... ++...+.++.+.+.+ . ...-.....++++||-+++.+..-
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~-~---~~~~~~~~~~~~lviaAt~d~~ln 86 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWI-E---REFDAEDLDDAFLVIAATDDEELN 86 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchh-h---cccChhhhcCceEEEEeCCCHHHH
Confidence 67889999999999999999999999999998876 334444333332211 1 111111123489999999998744
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHH-HhhCCcEEEecccC
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFS-LLMGRKIVGGSMIG 304 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~g~~~~ 304 (361)
....+..++.+..|++........+..-. +-.+.+.+.=+..+
T Consensus 87 ~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G 130 (210)
T COG1648 87 ERIAKAARERRILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG 130 (210)
T ss_pred HHHHHHHHHhCCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence 45666778889999887655433222222 22344565444443
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.038 Score=51.91 Aligned_cols=90 Identities=20% Similarity=0.260 Sum_probs=63.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.|.+|.|+|.|.+|+..++.++.+|.+|++.++..... +..+.+|... .. .+.++....|+|+-+.......
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~-~~~~~~g~~~---~~---~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPE-EVEQELGLTY---HV---SFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCch-hhHhhcCcee---cC---CHHHHhhcCCEEEEcCCCCHHHH
Confidence 57899999999999999999999999999998875322 2223455432 11 2334456689988887754322
Q ss_pred ----HHHHHhhccCCEEEEecC
Q 018094 262 ----MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~g~ 279 (361)
...+..|+++..+|+++.
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCC
Confidence 245677888888888875
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.037 Score=49.06 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=48.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.|+++||.|+ |.+|...+..+...|++|+++.++.++.. ... ...|-.+++.+.++ .+++|++|.
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4688999998 99999999999999999999987754321 111 12344554433322 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 9874
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.081 Score=47.98 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=61.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch--hHHHH---HHHcCCcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEA---IERLGADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~--~~~~~---~~~~g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
+++++||.|+ |.+|...++.+...|++|+++.++.+ ...++ .++.+... ..|-.+.+.+.++ .+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5678999998 99999999999999999998765432 22222 22334321 2344444433222 24
Q ss_pred CccEEEEcCCCcc--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++|+++.++|... .++.++..++.+|+++.++..
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 7899999987421 112344445677999988764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.029 Score=49.62 Aligned_cols=75 Identities=12% Similarity=0.236 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHH-------HhcC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQ-------AAMG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~-------~~~~ 246 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +.+. ..|..+.+.+. +..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4788999997 99999999999999999999999887665554433 2221 12444443322 2234
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|+++.++|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.028 Score=49.53 Aligned_cols=74 Identities=20% Similarity=0.316 Sum_probs=51.9
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE-E--ecCCCHHHHHHh-------cCCcc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-F--LVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~g~d 249 (361)
++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... . .|-.+++.+.++ .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999997 99999999999999999999998877655554333 2221 2 244444433322 24789
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.048 Score=47.54 Aligned_cols=71 Identities=23% Similarity=0.405 Sum_probs=55.3
Q ss_pred EEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 187 VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
|+|+|+ |.+|...++.+...+.+|.+++++..+ .....+..|++.+ .|+.+.+.+.+...|+|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689998 999999999999988999999998743 2223356788654 3456677888888899999999984
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.033 Score=49.27 Aligned_cols=74 Identities=20% Similarity=0.263 Sum_probs=52.7
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC----cE-EecCCCHHHHHHh-------cCCccE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DS-FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~----~~-v~~~~~~~~~~~~-------~~g~d~ 250 (361)
+.++||.|+ |.+|...+..+...|++|++++++.++..++.+++.. .. ..|-.+.+.+.+. .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 467999997 9999999999999999999999988776666554432 11 1344444443332 235899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
++.++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999874
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.037 Score=50.61 Aligned_cols=90 Identities=19% Similarity=0.264 Sum_probs=59.8
Q ss_pred CEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.+|.|+|+|.+|...+..++..|. +|++.+++.++...+ ++.|...... .+ ..+....+|+||.|+.....
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~-~~---~~~~~~~aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVT-TS---AAEAVKGADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceec-CC---HHHHhcCCCEEEECCCHHHHHH
Confidence 579999999999999998888884 888888887765444 5667532111 11 12223568999999887541
Q ss_pred -HHHHHHhhccCCEEEEecC
Q 018094 261 -LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 -~~~~~~~l~~~G~~v~~g~ 279 (361)
+......++++..++.+|.
T Consensus 82 v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHhhCCCCCEEEeCcc
Confidence 2223344567777777765
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.085 Score=46.56 Aligned_cols=98 Identities=17% Similarity=0.171 Sum_probs=61.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH-cCCcEE-ecCCC-HHHHHHhc-CCccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER-LGADSF-LVSRD-QDEMQAAM-GTMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~-~g~~~v-~~~~~-~~~~~~~~-~g~d~vid~~g~ 257 (361)
.+.+|||+|+ |.+|...++.+...|.+|+++.++.++....... .++..+ .|..+ .+.+.+.. .++|+||.+.|.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 4578999997 9999999999888899999998887654332211 112222 23333 23344444 489999998775
Q ss_pred cc-------------cHHHHHHhhcc--CCEEEEecCC
Q 018094 258 VH-------------PLMPLIGLLKS--QGKLVLVGAP 280 (361)
Q Consensus 258 ~~-------------~~~~~~~~l~~--~G~~v~~g~~ 280 (361)
.. .....++.+.. .++++.++..
T Consensus 96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 96 RRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 31 12334444443 3688887654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.083 Score=46.21 Aligned_cols=73 Identities=16% Similarity=0.033 Sum_probs=49.5
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-Cc-EEecCCCHHHHHHhc----CCccEEEEcCCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD-SFLVSRDQDEMQAAM----GTMDGIIDTVSA 257 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~~----~g~d~vid~~g~ 257 (361)
.++||.|+ |.+|...+..+...|++|++++++.++..++.++.. .. ...|-.+.+.+.++. ...|.++.++|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 46899997 999999888888899999999998777665543322 11 123555555544432 246777777653
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.057 Score=46.47 Aligned_cols=100 Identities=29% Similarity=0.290 Sum_probs=63.1
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHH---HHHcCCcEE-ecCCCHHHHHHhcCCccE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~---~~~~g~~~v-~~~~~~~~~~~~~~g~d~ 250 (361)
....++++++||-+|+| .|..++.+++..+ .+|+.+..+++-...+ .++.|...+ +...+..........||.
T Consensus 70 ~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~~~~fD~ 148 (212)
T PRK13942 70 ELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEENAPYDR 148 (212)
T ss_pred HHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCcCCCcCE
Confidence 34457899999999875 3666677777765 5898888886644322 233454321 111111100011247999
Q ss_pred EEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 251 IIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
|+-...........++.|+++|+++..
T Consensus 149 I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 149 IYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred EEECCCcccchHHHHHhhCCCcEEEEE
Confidence 987766666577888999999998765
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.035 Score=49.68 Aligned_cols=102 Identities=29% Similarity=0.283 Sum_probs=57.9
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCc--EEecCCCHHHHHHhcC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD--SFLVSRDQDEMQAAMG 246 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~--~v~~~~~~~~~~~~~~ 246 (361)
+..+-...++++|++||-+|+| -|-.+..+++..|++|+.++.+.+....+ +++.|.. ..+...+- +.+..
T Consensus 51 ~~~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~---~~~~~ 126 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY---RDLPG 126 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---GG---
T ss_pred HHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---cccCC
Confidence 4445556678999999999986 45566778888899999999988765443 2344532 11211221 22334
Q ss_pred CccEEEEc-----CCCc---ccHHHHHHhhccCCEEEEe
Q 018094 247 TMDGIIDT-----VSAV---HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 247 g~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~ 277 (361)
.+|.|+.. +|.. ..+..+.+.|+|+|++++-
T Consensus 127 ~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 127 KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 88988764 3321 1256688899999998744
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.047 Score=46.57 Aligned_cols=95 Identities=20% Similarity=0.339 Sum_probs=55.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCch-------------------hHHHH---HHHcCCc-EE--ec-C
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEA---IERLGAD-SF--LV-S 235 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~-------------------~~~~~---~~~~g~~-~v--~~-~ 235 (361)
...+|+|+|+|++|..+++.+...|. ++++++...- |...+ ++++... .+ ++ .
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 44679999999999999999999998 7877776522 11111 1222221 11 11 1
Q ss_pred CCHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCE-EEEe
Q 018094 236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLV 277 (361)
Q Consensus 236 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~-~v~~ 277 (361)
-+.+.+.+...++|+||+|..+.......-+.+...+. ++..
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~ip~i~~ 142 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFATRYLINDACVALGTPLISA 142 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 11233444556899999999886633333333344443 4443
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.031 Score=49.17 Aligned_cols=75 Identities=17% Similarity=0.284 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CCcE-E--ecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GADS-F--LVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~--g~~~-v--~~~~~~~~~~~~-------~~g~d 249 (361)
++.++||.|+ |.+|...++.+...|++|+++.++.++..+..+++ +... . .|-.+.+.+.++ .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999998 99999999988888999999999877655544433 3221 1 244444443332 24799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999885
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.13 Score=40.15 Aligned_cols=90 Identities=14% Similarity=0.352 Sum_probs=61.8
Q ss_pred EEEEcc-chHHHHHHHHHHHCC--CeEEEEeCC--chhHHHHHHHcCCcEEecCCCH--HHHH-----------------
Q 018094 187 VGVVGL-GGLGHVAVKFAKAMG--VKVTVISTS--PSKKSEAIERLGADSFLVSRDQ--DEMQ----------------- 242 (361)
Q Consensus 187 VlI~Ga-g~vG~~a~~la~~~g--~~Vi~~~~~--~~~~~~~~~~~g~~~v~~~~~~--~~~~----------------- 242 (361)
|.|+|+ |.+|..+.++.+.+. .+|+..+.. -++..+.+++|.+..+.-.++. +.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 578898 999999999999987 577766643 4456777788988776654432 1221
Q ss_pred ---Hhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEE
Q 018094 243 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL 276 (361)
Q Consensus 243 ---~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~ 276 (361)
++. ..+|+|+..+.+...+...+.+++.+-++.+
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 211 2689999988888888888888887766654
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.035 Score=48.78 Aligned_cols=75 Identities=20% Similarity=0.314 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCc---EEecCCCHHHHHH-------hcCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQA-------AMGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~-------~~~g~ 248 (361)
.+.++||.|+ |.+|...+..+...|++|+++.+..+...++.+++ +.. ...|..+.+.+.. ..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 99999999999889999999998876544443332 221 1234444443322 22468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.1 Score=46.13 Aligned_cols=74 Identities=28% Similarity=0.351 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHH----h---cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA----A---MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|++++++.. ..++.+++ +.+. ..|..+.+.+.+ + .+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999999999999999888643 22333332 3322 234444433222 1 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999974
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.045 Score=47.64 Aligned_cols=75 Identities=12% Similarity=0.164 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cC-C
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MG-T 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~-g 247 (361)
.++++||.|+ +++|.+.+..+...|++|+++.++.++..++.++ .+.+. ..|..+.+.+.++ .+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 8999999999999999999999888776555433 34322 2344444433321 24 6
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999873
|
|
| >PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.071 Score=47.51 Aligned_cols=96 Identities=17% Similarity=0.251 Sum_probs=72.2
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...||+..+.+..++...---.|.+|+|+|- ..+|.-.+.++...|++|++..+....
T Consensus 130 ~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~--------------------- 188 (279)
T PRK14178 130 GFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTEN--------------------- 188 (279)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhH---------------------
Confidence 3567777777777776653358999999997 599999999999999999887754321
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+....+|++|.++|....+.. +.++++..++++|..
T Consensus 189 L~~~~~~ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~ 226 (279)
T PRK14178 189 LKAELRQADILVSAAGKAGFITP--DMVKPGATVIDVGIN 226 (279)
T ss_pred HHHHHhhCCEEEECCCcccccCH--HHcCCCcEEEEeecc
Confidence 22334458999999997764443 347999999999865
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.049 Score=48.13 Aligned_cols=75 Identities=20% Similarity=0.324 Sum_probs=54.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.+.++||.|+ |.+|...++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++ .+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 999999999999999999999998887666655554321 1233444333322 2468999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
+.++|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998874
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.035 Score=50.78 Aligned_cols=88 Identities=19% Similarity=0.302 Sum_probs=63.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++..+..++.. +..... ..+.+.++....|+|+.+.......
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T~ 205 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPETV 205 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHHH
Confidence 678999999999999999999999999999887543211 222211 1223455566789999988764422
Q ss_pred ----HHHHHhhccCCEEEEecC
Q 018094 262 ----MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~g~ 279 (361)
...++.|+++..+|++|.
T Consensus 206 ~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 206 GIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHhHHHHHhcCCCCcEEEECCC
Confidence 236778899999999975
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.045 Score=51.41 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=62.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++..... +..+++|+..+ . .+.++....|+|+-+.......
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~-~~~~~~g~~~~---~---~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDP-ELEKETGAKFE---E---DLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcch-hhHhhcCceec---C---CHHHHHhhCCEEEEeCCCCHHHH
Confidence 68899999999999999999999999999988764322 22244554321 1 2334445688888877653212
Q ss_pred ----HHHHHhhccCCEEEEecC
Q 018094 262 ----MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~g~ 279 (361)
...+..|+++..+|+++.
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCC
Confidence 236677888888888874
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.037 Score=49.05 Aligned_cols=75 Identities=20% Similarity=0.326 Sum_probs=53.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcE-E--ecCCCHHHHHHh---cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS-F--LVSRDQDEMQAA---MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~-v--~~~~~~~~~~~~---~~g~d~v 251 (361)
.+.++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... . .|-.+.+.+.++ .+++|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4689999998 99999999999999999999998877655543333 2211 1 344444444333 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999885
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.089 Score=45.01 Aligned_cols=98 Identities=29% Similarity=0.276 Sum_probs=62.8
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHH---HHcCCc---EEecCCCHHHHHHhcCCcc
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAI---ERLGAD---SFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~---~~~g~~---~v~~~~~~~~~~~~~~g~d 249 (361)
...++++++||=+|+| .|..++.+++..+ .+|+.++.+++....+. ++.+.. .++..+-.+... ....+|
T Consensus 67 ~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~fD 144 (205)
T PRK13944 67 LIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPFD 144 (205)
T ss_pred hcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCcc
Confidence 3446889999999875 3666677777654 58999998876543332 234532 122222111111 124799
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
.|+-+...........+.|+++|+++..
T Consensus 145 ~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 145 AIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred EEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 9998877666567788999999998764
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.044 Score=50.90 Aligned_cols=95 Identities=19% Similarity=0.244 Sum_probs=63.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-----CcEEec-CCCHHHHHHhcCCccEEEEcCC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADSFLV-SRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-----~~~v~~-~~~~~~~~~~~~g~d~vid~~g 256 (361)
.|+++.|+|.|.+|..+++.++.+|++|++..++..+... ..++ .....+ ......+.++....|+|+.+..
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE--DGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT 235 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh--hhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence 5889999999999999999999999999999876332111 1111 000110 0112234455556899999876
Q ss_pred Cccc-----HHHHHHhhccCCEEEEecC
Q 018094 257 AVHP-----LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 257 ~~~~-----~~~~~~~l~~~G~~v~~g~ 279 (361)
.... -...+..|+++..+|++|.
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 4321 2357788999999999975
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.049 Score=50.34 Aligned_cols=88 Identities=23% Similarity=0.361 Sum_probs=62.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.|++|.|+|.|.+|...++.++.+|.+|++.++..... ..+.++... .+ +.++....|+|+-++......
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~~~~~----~~---l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE--AEKELGAEY----RP---LEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh--hHHHcCCEe----cC---HHHHHhhCCEEEEeCCCChHHh
Confidence 68899999999999999999999999999988765432 223444321 11 233344678888887653311
Q ss_pred ----HHHHHhhccCCEEEEecC
Q 018094 262 ----MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~g~ 279 (361)
...+..|+++..+++++.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcC
Confidence 346677888888888874
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.044 Score=48.55 Aligned_cols=72 Identities=19% Similarity=0.289 Sum_probs=50.7
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE--EecCCCHHHHHHh-------cCCccEEE
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS--FLVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~-------~~g~d~vi 252 (361)
++||.|+ +++|...++.+...|++|+++.++.++..+..+++ +... ..|..+.+.+.++ .+++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 5899997 99999999999999999999998877655554433 2111 2344444433322 24799999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
.++|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99885
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.15 Score=44.54 Aligned_cols=98 Identities=16% Similarity=0.224 Sum_probs=62.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHH---HcCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
++.++||+|+ |.+|...+..+...|++++++.++.+. ..++.+ +.+... ..|-.+.+.+.+. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5678999997 999999999999999999887765442 222222 233321 1233444433322 247
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+|++|.++|... .++.+++.++..|+++.++..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 999999988521 012334455667899988753
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.087 Score=46.02 Aligned_cols=75 Identities=20% Similarity=0.401 Sum_probs=50.1
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHc---CCcE-E--ecCCCHHHHHHhc-------CCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADS-F--LVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~~-------~g~ 248 (361)
++++||.|+ |.+|...+..+...|++|+++ .++.++..++.+.+ +... + .|..+.+.+.+.. +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999997 999999998888889999998 77766544443332 2221 1 2444444333321 379
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|.++|..
T Consensus 85 d~vi~~ag~~ 94 (247)
T PRK05565 85 DILVNNAGIS 94 (247)
T ss_pred CEEEECCCcC
Confidence 9999988753
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.17 Score=43.60 Aligned_cols=37 Identities=32% Similarity=0.393 Sum_probs=32.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
-.|.+|+|.|-|.+|+.+++++...|++++.+++.+.
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3688999999999999999999999997777776655
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.038 Score=48.80 Aligned_cols=74 Identities=22% Similarity=0.344 Sum_probs=51.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCcc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~d 249 (361)
++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|..+++.+.++ .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999997 99999999999999999999998876655544433 2221 1244444433222 24799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999875
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.038 Score=49.03 Aligned_cols=73 Identities=14% Similarity=0.261 Sum_probs=50.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCccE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~d~ 250 (361)
.++||.|+ |.+|...++.+...|.+|++++++.++..++.+++ +... ..|..+.+.+.++ .+++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999998 99999999999999999999998876654443332 3321 2244444433322 236899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|.++|.
T Consensus 82 vi~~ag~ 88 (263)
T PRK06181 82 LVNNAGI 88 (263)
T ss_pred EEECCCc
Confidence 9999875
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.11 Score=45.31 Aligned_cols=75 Identities=19% Similarity=0.298 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||+|+ |.+|...++.+...|.+|+++.++.++...+.. ..+.+.. .|..+.+.+.+. .+++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3568999998 999999999998999999999988776444333 2333222 244444332221 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|+++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999876
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.049 Score=48.72 Aligned_cols=75 Identities=21% Similarity=0.345 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-----Cc-EE--ecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----AD-SF--LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~-------~~ 246 (361)
++.++||.|+ |.+|...++.+...|++|+++.++.++.....+++. .. .+ .|-.+++.+.++ .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3678999998 999999999999999999999988765544433321 11 12 244444433322 23
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999874
|
|
| >PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.067 Score=47.83 Aligned_cols=96 Identities=16% Similarity=0.239 Sum_probs=72.3
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+..+....++...---.|++|.|+|. +.+|.-.+.++...|++|++.-+..+ .+
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 467777777777776653358999999997 99999999999999999988622211 12
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+....+|+||-++|....+... .++++..++++|...
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~--~ik~GavVIDvgin~ 233 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKE--FVKEGAVVIDVGMNR 233 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHH--HccCCcEEEEeccee
Confidence 23344589999999998866554 489999999998653
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.054 Score=47.77 Aligned_cols=75 Identities=19% Similarity=0.387 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE-E--ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-F--LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||+|+ |.+|...++.+...|++|++++++.++..++.+++ +... . .|-.+.+.+.++ .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 99999999999999999999998877655554443 3221 1 244444433322 2469
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|+++.++|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999985
|
|
| >PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.084 Score=47.01 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=72.7
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++.-+.....
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l--------------------- 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNL--------------------- 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 467777777777776553358999999996 8999999999999999998765443222
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+.+..+|+++-++|.+..+. .+.++++..++++|...
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTSS 233 (278)
T ss_pred HHHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeeccc
Confidence 223345899999999988443 45589999999998654
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.11 Score=48.41 Aligned_cols=93 Identities=13% Similarity=0.322 Sum_probs=67.6
Q ss_pred CEEEEEcc-chHHHHHHHHHHHC--CCeEEEEe--CCchhHHHHHHHcCCcEEecCCCH--HHHH---------------
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVIS--TSPSKKSEAIERLGADSFLVSRDQ--DEMQ--------------- 242 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~--g~~Vi~~~--~~~~~~~~~~~~~g~~~v~~~~~~--~~~~--------------- 242 (361)
++|.|+|+ |.+|..++.+.+.. ..+|+.++ ++.++..+.+++|+...+.-.++. ..++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 46899997 99999999999876 46888776 455577788889998776543321 1111
Q ss_pred ---Hhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 243 ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 243 ---~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
++. ..+|+|+.++.+...+...+.+++.|-++.+-
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLA 121 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALA 121 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEe
Confidence 111 15899999999887788888889888776653
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.038 Score=48.22 Aligned_cols=75 Identities=21% Similarity=0.352 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.+.++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +... ..|..+.+.+.++ .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3578999997 99999999998889999999999877655443333 3221 1233444433322 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999875
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.057 Score=47.60 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=51.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHH----Hh---c-CCccEEEEc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQ----AA---M-GTMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~----~~---~-~g~d~vid~ 254 (361)
+++||+|+ |.+|...++.+...|++|+++.++.++.+++ ++.+...+ .|..+.+.+. +. . +.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 9999999999999999999999887766554 45665433 3444443322 21 2 468899988
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.14 Score=46.32 Aligned_cols=76 Identities=16% Similarity=0.241 Sum_probs=49.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHH---HHcCCcE---EecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAI---ERLGADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~---~~~g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
-++.++||.|+ |.+|...+..+...|++|+++.++.++ ...+. +..+.+. ..|-.+.+.+.++ .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35678999997 999999999998899999998877532 22221 2224322 1244444433222 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 78999999875
|
|
| >PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.083 Score=47.24 Aligned_cols=96 Identities=18% Similarity=0.220 Sum_probs=72.7
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...||+..+.+..++...---.|++|+|+|. ..+|.-.+.++...|++|++.-+....
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~--------------------- 200 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD--------------------- 200 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------
Confidence 3567877777777776653348999999997 679999999999999999887643221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++.++|.+..+ -.+.++++..++++|..
T Consensus 201 l~~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 201 LKKYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 223344589999999998744 34578999999999874
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.058 Score=47.66 Aligned_cols=75 Identities=17% Similarity=0.290 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.+.++||.|+ |.+|...++.+...|++|+++.+..++..+..++.+... ..|-.+++.+.++ .+++|++|.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999997 999999999999999999888765543322223333322 2344554443332 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.031 Score=50.99 Aligned_cols=75 Identities=25% Similarity=0.251 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----C-CcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-ADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g-~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.+.+|||.|+ |.+|..+++.+...|++|++++++.++..+..+++ + ... ..|-.+.+.+.++ .+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5789999997 99999999998889999999998876654433332 1 111 1344454433322 23
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 95 ~iD~li~nAg~ 105 (306)
T PRK06197 95 RIDLLINNAGV 105 (306)
T ss_pred CCCEEEECCcc
Confidence 69999999874
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.071 Score=46.54 Aligned_cols=75 Identities=24% Similarity=0.327 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
++.++||.|+ |.+|...+..+...|..|++..++.++..++.+.++... ..|-.+.+.+.++ .+++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 999999999998899999888888776666655555322 1233444433322 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999885
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.12 Score=45.22 Aligned_cols=76 Identities=24% Similarity=0.284 Sum_probs=49.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
+++++||.|+ |.+|...++.+...|++|++..+. .++..+..+ +.+.... .|..+.+.+.+. .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3578899997 999999999999999998886543 233222222 2343322 344444333222 247
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
.|+++.++|..
T Consensus 82 id~li~~ag~~ 92 (246)
T PRK12938 82 IDVLVNNAGIT 92 (246)
T ss_pred CCEEEECCCCC
Confidence 99999999863
|
|
| >PRK08291 ectoine utilization protein EutC; Validated | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.11 Score=48.06 Aligned_cols=104 Identities=18% Similarity=0.272 Sum_probs=67.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+++++ |.. +....+ +.+...++|+|+.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 445789999999999988777764 565 8888899888877777655 332 222222 223335689999998
Q ss_pred CCcccHHHHHHhhccCCEEEEecCCCC-CcccChHH
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS 290 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~ 290 (361)
.....+-. ...++++-.+..+|.... ..+++...
T Consensus 206 ~s~~p~i~-~~~l~~g~~v~~vg~d~~~~rEld~~~ 240 (330)
T PRK08291 206 PSEEPILK-AEWLHPGLHVTAMGSDAEHKNEIAPAV 240 (330)
T ss_pred CCCCcEec-HHHcCCCceEEeeCCCCCCcccCCHHH
Confidence 77542222 234788778888876432 33444433
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.052 Score=48.29 Aligned_cols=121 Identities=21% Similarity=0.177 Sum_probs=82.9
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-----------HHHHH-------H
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-----------QDEMQ-------A 243 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-----------~~~~~-------~ 243 (361)
-++..+|+.|.|..|+.++..++..|+-|........+.++. +.+|++.+-..+. +++.. +
T Consensus 162 v~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv-~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQV-ESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhh-hhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 466789999999999999999999999998888777665444 5677643211111 12222 2
Q ss_pred hcCCccEEEEcCCCc------ccHHHHHHhhccCCEEEEecCCC-CCcc--cChHHHhhCCcEEEeccc
Q 018094 244 AMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLVGAPE-KPLE--LPAFSLLMGRKIVGGSMI 303 (361)
Q Consensus 244 ~~~g~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~-~~~~--~~~~~~~~~~~~i~g~~~ 303 (361)
...++|+||-++--+ .........|+||.-+|++.... +++. .+-.....++++|.|...
T Consensus 241 ~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~n 309 (356)
T COG3288 241 QAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTN 309 (356)
T ss_pred HhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecC
Confidence 224899999986443 12457888999999999997643 4433 233445678899998754
|
|
| >PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.095 Score=46.80 Aligned_cols=97 Identities=21% Similarity=0.234 Sum_probs=73.4
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++.-+.....
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l-------------------- 196 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNL-------------------- 196 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH--------------------
Confidence 3567777777777766553358999999996 8999999999999999998766443222
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+.+..+|+++-++|.+..+. .+.++++..++++|...
T Consensus 197 -~~~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin~ 234 (284)
T PRK14177 197 -PSIVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYNP 234 (284)
T ss_pred -HHHHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCcc
Confidence 223445899999999987443 56789999999999743
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.11 Score=45.82 Aligned_cols=75 Identities=16% Similarity=0.237 Sum_probs=48.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHc---CCcE-E--ecCCCHHHHHHh----c-----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADS-F--LVSRDQDEMQAA----M----- 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~----~----- 245 (361)
.+.+++|.|+ |.+|...++.+...|++|++. .++.++..+..+++ +... + .|-.+.+.+.+. .
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999997 999999999998899998775 45555444443333 2221 1 244454433221 1
Q ss_pred ----CCccEEEEcCCC
Q 018094 246 ----GTMDGIIDTVSA 257 (361)
Q Consensus 246 ----~g~d~vid~~g~ 257 (361)
.++|++|.++|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 258999999875
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.094 Score=46.52 Aligned_cols=98 Identities=12% Similarity=0.148 Sum_probs=61.6
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHc---CCc-E--EecCCCHHHHHHh-------
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERL---GAD-S--FLVSRDQDEMQAA------- 244 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~--~~~~~~~~~---g~~-~--v~~~~~~~~~~~~------- 244 (361)
.++++||.|+ +++|.+.+..+...|++|+++.++.+ +..+.++++ +.. . ..|-.+.+.+.++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 4688999996 48999999999999999988764432 222222222 211 1 2344554443322
Q ss_pred cCCccEEEEcCCCcc-----------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 245 MGTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 245 ~~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.+.+|++++++|... ..+.++..++.+|+++.++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~ 149 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL 149 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 247999999988421 013355566778999988754
|
|
| >PRK06823 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.22 Score=45.55 Aligned_cols=104 Identities=18% Similarity=0.162 Sum_probs=71.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHHc---CCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~-g~-~Vi~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
+...++.|+|+|..+...++.+... .. +|.+..++.++...+++++ +.+... . +...+...+.|+|+-+++
T Consensus 126 ~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~---~~~~~av~~ADIV~taT~ 201 (315)
T PRK06823 126 QHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T---LDAAEVAHAANLIVTTTP 201 (315)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E---CCHHHHhcCCCEEEEecC
Confidence 5667889999999999888887754 44 8999999998877665544 333211 1 223445578999999887
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCC-cccChHH
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFS 290 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~ 290 (361)
+..-+ --.+.++++-.+..+|..... .+++...
T Consensus 202 s~~P~-~~~~~l~~G~hi~~iGs~~p~~~Eld~~~ 235 (315)
T PRK06823 202 SREPL-LQAEDIQPGTHITAVGADSPGKQELDAEL 235 (315)
T ss_pred CCCce-eCHHHcCCCcEEEecCCCCcccccCCHHH
Confidence 75422 233568999999999976543 4565444
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.029 Score=43.90 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=51.9
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
.-+|-|+|+|.+|......++..|..|..+.+... ..++++..++...+.+. .+....+|++|-++.... +.
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~------~~~~~~aDlv~iavpDda-I~ 82 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL------EEILRDADLVFIAVPDDA-IA 82 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T------TGGGCC-SEEEE-S-CCH-HH
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc------ccccccCCEEEEEechHH-HH
Confidence 34688999999999999999999999888865544 44555444554433222 233457999999999876 77
Q ss_pred HHHHhhccC
Q 018094 263 PLIGLLKSQ 271 (361)
Q Consensus 263 ~~~~~l~~~ 271 (361)
..++.|...
T Consensus 83 ~va~~La~~ 91 (127)
T PF10727_consen 83 EVAEQLAQY 91 (127)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHHh
Confidence 777777654
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.036 Score=48.85 Aligned_cols=75 Identities=20% Similarity=0.265 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+ +.+... ..|..+.+.+..+ .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999998 999999999998899999999998766444333 333321 1344444333322 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.052 Score=48.06 Aligned_cols=75 Identities=23% Similarity=0.330 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...++.+...|++|++++++.++.+...+.+ +... ..|..+.+.+.+. .+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5688999997 99999999999999999999999877654443322 2221 2344554444221 2478
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999875
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.064 Score=47.34 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~ 250 (361)
.++++||.|+ +.+|.+.++.+...|++|+++.+... +..+..++.+.+. ..|-.+.+.+.++ .+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5788999997 99999999999999999998876542 2222334445432 2355555433322 247999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
++.++|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999885
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.063 Score=49.44 Aligned_cols=75 Identities=16% Similarity=0.183 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHcCC---cE-EecCCCHHHHHHhcCCccEEEEcC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~~~g~---~~-v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
.+.+|||.|+ |.+|...+..+...| .+|++++++..+...+.+.+.. .. ..|..+.+.+.+...++|+||.++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 3678999997 999999998887765 6888888765544344334322 11 125556666666666899999998
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
+.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 75
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.05 Score=48.16 Aligned_cols=78 Identities=17% Similarity=0.220 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCchh-HHHHHHHc---CC-c-EE--ecCCCHHH----HHHhc-
Q 018094 181 DKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSK-KSEAIERL---GA-D-SF--LVSRDQDE----MQAAM- 245 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~~-~~~~~~~~---g~-~-~v--~~~~~~~~----~~~~~- 245 (361)
+..+.+|||.|+ |++|...++.+... |++|++++++.++ ..++.+++ +. + .+ .|..+.+. +.++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 457789999998 99999999877666 5899999988775 44443433 32 1 12 34444332 22222
Q ss_pred -CCccEEEEcCCCc
Q 018094 246 -GTMDGIIDTVSAV 258 (361)
Q Consensus 246 -~g~d~vid~~g~~ 258 (361)
++.|+++.++|..
T Consensus 85 ~g~id~li~~ag~~ 98 (253)
T PRK07904 85 GGDVDVAIVAFGLL 98 (253)
T ss_pred cCCCCEEEEeeecC
Confidence 4799999887663
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.06 Score=50.09 Aligned_cols=87 Identities=14% Similarity=0.078 Sum_probs=57.5
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----HcC------CcEE-ecCCC
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE----RLG------ADSF-LVSRD 237 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~----~~g------~~~v-~~~~~ 237 (361)
|||.-++.... -+..+|||.|+ |-+|...+..+...|.+|+++++.......... ..+ ...+ .|..+
T Consensus 2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d 80 (348)
T PRK15181 2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK 80 (348)
T ss_pred chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence 56776665554 34578999997 999999999999999999999875443211111 111 1112 23444
Q ss_pred HHHHHHhcCCccEEEEcCCC
Q 018094 238 QDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 238 ~~~~~~~~~g~d~vid~~g~ 257 (361)
.+.+.++..++|+||.+++.
T Consensus 81 ~~~l~~~~~~~d~ViHlAa~ 100 (348)
T PRK15181 81 FTDCQKACKNVDYVLHQAAL 100 (348)
T ss_pred HHHHHHHhhCCCEEEECccc
Confidence 55556656689999999864
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.11 Score=45.66 Aligned_cols=71 Identities=18% Similarity=0.294 Sum_probs=48.1
Q ss_pred EEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHcC----Cc----EEecCCCHHHHHHh-------cCCcc
Q 018094 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLG----AD----SFLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 187 VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~~g----~~----~v~~~~~~~~~~~~-------~~g~d 249 (361)
+||.|+ |.+|...++.+...|++|+++.++ .++..++.+++. .. ...|..+.+.+.++ .+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 788987 999999999998899999999987 544444433332 11 12244454433322 24789
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (251)
T PRK07069 82 VLVNNAGV 89 (251)
T ss_pred EEEECCCc
Confidence 99999875
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.04 Score=50.68 Aligned_cols=76 Identities=14% Similarity=0.264 Sum_probs=52.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----C-Cc---EEecCCC--HHHH---HHhcC-
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G-AD---SFLVSRD--QDEM---QAAMG- 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g-~~---~v~~~~~--~~~~---~~~~~- 246 (361)
+.|+++||.|+ +++|...+..+...|++|++++++.++.+++.+++ + .. ...|-.+ .+.+ .+..+
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 35899999998 99999999988889999999999988776655443 2 11 1223332 2222 22223
Q ss_pred -CccEEEEcCCC
Q 018094 247 -TMDGIIDTVSA 257 (361)
Q Consensus 247 -g~d~vid~~g~ 257 (361)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 35699999875
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.12 Score=44.51 Aligned_cols=99 Identities=21% Similarity=0.353 Sum_probs=58.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchh-------------------H---HHHHHHcCCcEEecC----
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------------------K---SEAIERLGADSFLVS---- 235 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~-------------------~---~~~~~~~g~~~v~~~---- 235 (361)
+.++|+|+|.|++|.+++..+..-|. ++.+++-.+-. . .+..++.....-+..
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 45789999999999999999999888 66666643211 1 111122222111111
Q ss_pred CCHHHHHHhcC-CccEEEEcCCCcccHHHHH-HhhccCCEEEEecCCC
Q 018094 236 RDQDEMQAAMG-TMDGIIDTVSAVHPLMPLI-GLLKSQGKLVLVGAPE 281 (361)
Q Consensus 236 ~~~~~~~~~~~-g~d~vid~~g~~~~~~~~~-~~l~~~G~~v~~g~~~ 281 (361)
-.++.+..+.. ++|+|+||..+-.+=-..+ .|.+.+=.++..+..+
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 12345555544 7999999998865222233 3555556777776544
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.053 Score=47.72 Aligned_cols=75 Identities=20% Similarity=0.306 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE-E--ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-F--LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~g~ 248 (361)
.+.++||.|+ |.+|...++.+...|++|++++++.++...+.+++ +... . .|..+.+.+.++ .+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999997 99999999999999999999998876655554443 3221 1 244444333221 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|+++.++|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999874
|
|
| >PRK05562 precorrin-2 dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.26 Score=42.49 Aligned_cols=114 Identities=16% Similarity=0.059 Sum_probs=67.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
++.+|||+|+|.++.-=+..+...|++|+++...-.. ...+. +.|.-..+. +..+ ..-..++++||-+++... +
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~-~~~~i~~~~-r~~~--~~dl~g~~LViaATdD~~-v 98 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLK-KYGNLKLIK-GNYD--KEFIKDKHLIVIATDDEK-L 98 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHH-hCCCEEEEe-CCCC--hHHhCCCcEEEECCCCHH-H
Confidence 5789999999999998888888899999999865432 22222 222211111 1111 111257999999999877 6
Q ss_pred HHHHHhh-ccCCEEEEecCCCCC--cccChHHHhhCCcEEEecc
Q 018094 262 MPLIGLL-KSQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSM 302 (361)
Q Consensus 262 ~~~~~~l-~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~ 302 (361)
+..+... +..+.++........ +.+|. .+-...+++.-+.
T Consensus 99 N~~I~~~a~~~~~lvn~vd~p~~~dFi~PA-iv~rg~l~IaIST 141 (223)
T PRK05562 99 NNKIRKHCDRLYKLYIDCSDYKKGLCIIPY-QRSTKNFVFALNT 141 (223)
T ss_pred HHHHHHHHHHcCCeEEEcCCcccCeEEeee-EEecCCEEEEEEC
Confidence 6555554 455777766543322 22222 1223446665443
|
|
| >PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.12 Score=46.31 Aligned_cols=96 Identities=21% Similarity=0.250 Sum_probs=72.6
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+..+....++...---.|++|+|+|. ..+|.=.+.++...|++|++.-+... .+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------NL 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------hH
Confidence 567877777777776653358999999996 89999999999999999987643321 12
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+....+|+++-++|.+..+. .+.++++..++++|...
T Consensus 196 ~~~~~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 196 AELTKQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVNR 233 (284)
T ss_pred HHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeccc
Confidence 233445899999999987433 45679999999998753
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.052 Score=49.94 Aligned_cols=94 Identities=20% Similarity=0.265 Sum_probs=66.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
-.+.+|+|+|+ |.+|..+++.+.. .|. +++++.++.++..++.++++...+ ..+.+....+|+|+-+++..
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence 36789999998 9999998888864 565 888888887777777666642211 12334455799999999886
Q ss_pred ccHHHHHHhhccCCEEEEecCCC
Q 018094 259 HPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 259 ~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
..+..-...+++.-.+++++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 54322234567777888888754
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.066 Score=47.97 Aligned_cols=75 Identities=21% Similarity=0.340 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.+.++||.|+ |.+|...+..+...|++|+++.++.++..++.+++ +... ..|..+.+.+..+ .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999999999999999998876655554443 3221 1234444333322 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999883
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.07 Score=44.12 Aligned_cols=75 Identities=20% Similarity=0.275 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHH-------hcCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA-------AMGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~-------~~~g~ 248 (361)
.+.+++|.|+ +++|...+..+...|++|+++.++.+...+..+++ +... ..|..+.+.+.+ ..+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 89999999998889999999998766544433332 4321 123333333222 12468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 888888774
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.051 Score=48.61 Aligned_cols=78 Identities=19% Similarity=0.298 Sum_probs=56.1
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC---Cc------EEecCCCHHHHH-------Hh
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---AD------SFLVSRDQDEMQ-------AA 244 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g---~~------~v~~~~~~~~~~-------~~ 244 (361)
-.|+++||.|+ .++|.+++..+...|++|+++.++.++..+..+++. .. .+.|..+++... +.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46888999997 899999999999999999999999987666555432 21 223444333222 22
Q ss_pred -cCCccEEEEcCCCcc
Q 018094 245 -MGTMDGIIDTVSAVH 259 (361)
Q Consensus 245 -~~g~d~vid~~g~~~ 259 (361)
.++.|+.++++|...
T Consensus 86 ~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 86 FFGKIDILVNNAGALG 101 (270)
T ss_pred hCCCCCEEEEcCCcCC
Confidence 357999999988754
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.085 Score=47.19 Aligned_cols=73 Identities=19% Similarity=0.254 Sum_probs=51.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEEE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++||.|+ |.+|...++.+...|.+|+++.++.++..++.+.++... ..|..+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999997 999999999998899999999998776655544443321 2344444433322 246899999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9875
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.055 Score=47.87 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|+++.++ ++..++ .++.+.+. ..|-.+.+.+.+. .+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 999999999999999999999887 332222 23334321 2344454433322 2478
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999999875
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.058 Score=46.66 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=50.4
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE--EecCCCHHHHHHhc-----CCccEEEEcCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAAM-----GTMDGIIDTVS 256 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~-----~g~d~vid~~g 256 (361)
++++|.|+ |.+|...+..+...|++|++++++.++..++ ++++... ..|-.+.+.++++. +++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899997 9999999999988999999999987765444 3443211 23444544433322 26999999886
Q ss_pred C
Q 018094 257 A 257 (361)
Q Consensus 257 ~ 257 (361)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 5
|
|
| >PRK10258 biotin biosynthesis protein BioC; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.3 Score=43.11 Aligned_cols=154 Identities=17% Similarity=0.154 Sum_probs=80.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC----
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---- 257 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~---- 257 (361)
.++++||-+|+|. |..+..+++ .|.+++.++.+++......+......++.. +.+.+....+.+|+|+....-
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~-d~~~~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAG-DIESLPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEc-CcccCcCCCCcEEEEEECchhhhcC
Confidence 4567888899864 555555554 578999999988765544333222222211 111111112369999875432
Q ss_pred --cccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhC-CcEEEecccCCHHHHHHHHHHHHcCCCceee--EEEeccc
Q 018094 258 --VHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG-RKIVGGSMIGGMKETQEMIDFAAKHNIRADI--EVIPADY 332 (361)
Q Consensus 258 --~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~--~~~~l~~ 332 (361)
...+..+.+.|+++|.++......+.+.- ....... ...-......+.+++ .+++..-.+.... .+..++.
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~e-l~~~~~~~~~~~~~~~~~~~~~l---~~~l~~~~~~~~~~~~~~~f~~ 193 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPE-LHQAWQAVDERPHANRFLPPDAI---EQALNGWRYQHHIQPITLWFDD 193 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCCCCchHH-HHHHHHHhccCCccccCCCHHHH---HHHHHhCCceeeeeEEEEECCC
Confidence 12366788899999999977544332211 0111000 000111222333333 3344433333333 4667788
Q ss_pred HHHHHHHHHc
Q 018094 333 VNTALERLAK 342 (361)
Q Consensus 333 ~~~a~~~~~~ 342 (361)
..+.++.++.
T Consensus 194 ~~~~l~~lk~ 203 (251)
T PRK10258 194 ALSAMRSLKG 203 (251)
T ss_pred HHHHHHHHHH
Confidence 8888887753
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.099 Score=43.13 Aligned_cols=92 Identities=26% Similarity=0.380 Sum_probs=62.5
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec--CCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV--SRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~--~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
+|.|+|+ |-+|...++=|+..|.+|+++++++.+.... + +. .++. .-+...+.+...|+|+||++.|...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~--~~-~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-Q--GV-TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-c--cc-eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence 4778898 9999999999999999999999998875332 1 21 1111 1223334455569999999988761
Q ss_pred ------cHHHHHHhhccC--CEEEEecCCC
Q 018094 260 ------PLMPLIGLLKSQ--GKLVLVGAPE 281 (361)
Q Consensus 260 ------~~~~~~~~l~~~--G~~v~~g~~~ 281 (361)
..+..+..|+.- -|++.+|..+
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 122355666663 3888887643
|
|
| >cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.091 Score=44.02 Aligned_cols=115 Identities=15% Similarity=0.149 Sum_probs=76.9
Q ss_pred cccchhhhhhhHHHHhhCC---------CCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC-c
Q 018094 162 APLLCAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D 230 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~---------~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~-~ 230 (361)
..+||+..+.+..|+...- --.|++|+|+|- ..+|.=.+.++...|++|++...+.... + ++-+- .
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~~~~ 107 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGESIR 107 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-ccccccc
Confidence 3567777777777776532 157999999996 8999999999999999999875433211 0 00000 0
Q ss_pred EEecC-CC-HHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 231 SFLVS-RD-QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 231 ~v~~~-~~-~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+--.. .+ +..+.+....+|+|+-++|.... .--.+.++++..++++|..
T Consensus 108 hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~-~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 108 HEKHHVTDEEAMTLDCLSQSDVVITGVPSPNY-KVPTELLKDGAICINFASI 158 (197)
T ss_pred cccccccchhhHHHHHhhhCCEEEEccCCCCC-ccCHHHcCCCcEEEEcCCC
Confidence 00000 01 12245566789999999999883 2335678999999999865
|
The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional |
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.091 Score=46.08 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHcCCcE---EecCCCHHHHHH-------hcCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADS---FLVSRDQDEMQA-------AMGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~~~~g~~~---v~~~~~~~~~~~-------~~~g~d~ 250 (361)
.++++||.|+ |.+|...+..+...|++|++++++.. +..+..++.+... ..|..+.+.+.. ..+++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4788999998 99999999999999999999988652 2222233444321 234444443332 1247999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
++.++|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999875
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.071 Score=46.98 Aligned_cols=74 Identities=23% Similarity=0.360 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc----EEecCCCHHHHHHh-------cCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~-------~~g~d~ 250 (361)
.+.++||.|+ |.+|...++.+...|++|+++.++.+.. +..+++... ...|-.+.+.+.+. .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999998 9999999999999999999998876543 332333221 12344444433322 247899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999985
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.19 Score=53.04 Aligned_cols=136 Identities=13% Similarity=0.111 Sum_probs=85.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHC-CCe-------------EEEEeCCchhHHHHHHHc-CCcE-EecCCCHHHHHHhcC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAM-GVK-------------VTVISTSPSKKSEAIERL-GADS-FLVSRDQDEMQAAMG 246 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~-g~~-------------Vi~~~~~~~~~~~~~~~~-g~~~-v~~~~~~~~~~~~~~ 246 (361)
..++|+|+|+|.+|..++..+... +++ |++.+...++..++++.+ +.+. .+|..+.+.+.++..
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 366899999999999999888654 334 666666666666676666 4432 355677777777656
Q ss_pred CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHH--HHHHHHcC
Q 018094 247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE--MIDFAAKH 319 (361)
Q Consensus 247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~--~~~~l~~~ 319 (361)
++|+|+.++........+..|++.+-.++..........--....-.+++.+..-...++- +.+ +.+++.++
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPG-id~~lA~~~Id~~ 721 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPG-IDHMMAMKMIDDA 721 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHH-HHHHHHHHHHHhh
Confidence 7999999999876566777788887777665311111111111223466666655443332 333 34555543
|
|
| >TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.1 Score=47.86 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=61.5
Q ss_pred EEEEEccchHHHHHHHHHHHCC----CeEEEEeCCchh-HHHHHHHcCC--------------------cE--EecCCCH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG----VKVTVISTSPSK-KSEAIERLGA--------------------DS--FLVSRDQ 238 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g----~~Vi~~~~~~~~-~~~~~~~~g~--------------------~~--v~~~~~~ 238 (361)
+|.|+|.|.+|..+.+.+...+ .+|..+..-.+. ....+-++.. +. ++..+++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~p 80 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPTP 80 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCCh
Confidence 3779999999999999887653 577776653322 1111122221 00 1111222
Q ss_pred HHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 239 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+...++|+||+|+|.......+...++.|++.|.++.+
T Consensus 81 ~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 81 EALPWRALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhccccccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 333332348999999999988788889999999999998765
|
Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.27 Score=45.90 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=48.8
Q ss_pred CCCCEEEEEcc-chHHHH--HHHHHHHCCCeEEEEeCCch---------------hHHHHHHHcCCcEE---ecCCCHHH
Q 018094 182 KPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSPS---------------KKSEAIERLGADSF---LVSRDQDE 240 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~--a~~la~~~g~~Vi~~~~~~~---------------~~~~~~~~~g~~~v---~~~~~~~~ 240 (361)
..++++||+|+ +++|++ .++.+ ..|++++++....+ ...+.+++.|.... .|-.+++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 45689999997 899999 56666 88999888874221 12334456665322 24444433
Q ss_pred HH-------HhcCCccEEEEcCCCc
Q 018094 241 MQ-------AAMGTMDGIIDTVSAV 258 (361)
Q Consensus 241 ~~-------~~~~g~d~vid~~g~~ 258 (361)
+. +..+++|+++.+++..
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 22 2235799999999886
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.062 Score=47.48 Aligned_cols=74 Identities=15% Similarity=0.318 Sum_probs=49.6
Q ss_pred CCCEEEEEccc---hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE----EecCCCHHHHHH----h---cCCc
Q 018094 183 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS----FLVSRDQDEMQA----A---MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Gag---~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~----v~~~~~~~~~~~----~---~~g~ 248 (361)
.++++||.|++ ++|.+.++.+...|++|+++.++. +..+..+++.... ..|-.+.+.+.+ + .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57889999974 899999999999999999988763 3333334442211 134444433322 2 2469
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++++++|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999999874
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.22 Score=44.41 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=59.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCC----c--EEecCCCHHHHHHhcCCccEEEE-
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGA----D--SFLVSRDQDEMQAAMGTMDGIID- 253 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~----~--~v~~~~~~~~~~~~~~g~d~vid- 253 (361)
.++++||++|.|. |.++..+++.. +.+++++..+++-...+.+.|+. . .++..+-.+.+....+.+|+||-
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4567899999863 77777777776 45888888877655433333442 1 12222223445444457999873
Q ss_pred cCCC---------cccHHHHHHhhccCCEEEE
Q 018094 254 TVSA---------VHPLMPLIGLLKSQGKLVL 276 (361)
Q Consensus 254 ~~g~---------~~~~~~~~~~l~~~G~~v~ 276 (361)
.... ...+..+.+.|+++|.++.
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 2111 2346778899999999986
|
|
| >PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.13 Score=45.85 Aligned_cols=96 Identities=19% Similarity=0.228 Sum_probs=73.2
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++.-+....
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~d--------------------- 194 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD--------------------- 194 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCC---------------------
Confidence 3567887777887877654457999999996 899999999999999999776543221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 195 l~~~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin 232 (282)
T PRK14180 195 LKSHTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGIN 232 (282)
T ss_pred HHHHhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEeccc
Confidence 1222345899999999988443 4678999999999864
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.067 Score=46.90 Aligned_cols=74 Identities=20% Similarity=0.293 Sum_probs=50.9
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHH-------hcCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQA-------AMGT 247 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~-------~~~g 247 (361)
+.++||.|+ |.+|...++.+...|++|++++++.++..++...+ +... ..|..+.+.+.+ ..++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999997 99999999888888999999999877655543322 2111 134455443322 2247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 9999999874
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.06 Score=49.49 Aligned_cols=76 Identities=21% Similarity=0.267 Sum_probs=52.2
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC--c-EE--ecCCCHHHHHHhcCCccEEE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D-SF--LVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~--~-~v--~~~~~~~~~~~~~~g~d~vi 252 (361)
..+.+|||.|+ |.+|...+..+...|.+|++++++.++.......+ +. . .+ .|..+.+.+.++..++|+||
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 35789999997 99999999999999999988877765432221111 11 1 11 24445555666666899999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
.+++.
T Consensus 83 h~A~~ 87 (325)
T PLN02989 83 HTASP 87 (325)
T ss_pred EeCCC
Confidence 99874
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.072 Score=47.00 Aligned_cols=75 Identities=24% Similarity=0.333 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...+..+...|++|+++.++.++..++.+ +.+... ..|..+.+.+.++ .+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999997 999999999888899999999998766544433 334221 2244444433222 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.075 Score=46.91 Aligned_cols=74 Identities=22% Similarity=0.269 Sum_probs=52.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC---cE-EecCCCHHHHHHh-------cCCccEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~-v~~~~~~~~~~~~-------~~g~d~v 251 (361)
++++||+|+ |.+|...+..+...|++|++++++.++...+.+++.. .. ..|..+.+.+.+. .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467999998 9999999999888999999999988776666554431 11 2344454443322 1368999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999985
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.07 Score=49.66 Aligned_cols=75 Identities=21% Similarity=0.252 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC----CcE-EecCCCHHHHHHhcC--CccEEEEc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----ADS-FLVSRDQDEMQAAMG--TMDGIIDT 254 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~--g~d~vid~ 254 (361)
.+.+|||.|+ |.+|...++.+...|.+|+++++.........+.++ ... ..|-.+.+.+.++.. ++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 3678999997 999999999999999999998877654333222222 111 224445555555433 58999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
++.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 874
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+) | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.15 Score=45.99 Aligned_cols=97 Identities=18% Similarity=0.162 Sum_probs=72.8
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
+.+||+..+.+..++...---.|++|+|+|- ..+|.=.+.++...|++|++.-+....
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~n--------------------- 203 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPD--------------------- 203 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence 4568888888887876653347999999996 899999999999999999887543221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+....+|+++-++|.+..+. .+.+++|..++++|...
T Consensus 204 l~~~~~~ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin~ 242 (299)
T PLN02516 204 PESIVREADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTNA 242 (299)
T ss_pred HHHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeeccc
Confidence 2233345799999999876443 45689999999998643
|
|
| >PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.14 Score=45.80 Aligned_cols=96 Identities=13% Similarity=0.162 Sum_probs=72.3
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
.+||+..+....++...---.|++|+|+|. ..+|.=.+.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~---------------------l 194 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKD---------------------L 194 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 567887777777776654357999999996 899999999999999999876543321 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+.+..+|+++-++|.+..+. .+.+++|..++++|...
T Consensus 195 ~~~~~~ADIvI~AvG~~~~i~--~~~vk~GavVIDvGin~ 232 (284)
T PRK14170 195 PQVAKEADILVVATGLAKFVK--KDYIKPGAIVIDVGMDR 232 (284)
T ss_pred HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEccCcc
Confidence 233345799999999987433 45689999999998753
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.069 Score=47.85 Aligned_cols=76 Identities=16% Similarity=0.226 Sum_probs=51.1
Q ss_pred CCCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHcCCcE--EecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADS--FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~ 246 (361)
-.++++||.|+ +++|.+.+..+...|++|+++.+++ ++..++.++++... ..|-.+.+.+.++ .+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 35688999986 5899999999999999999887653 23334444555322 2344444433322 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
.+|++++++|.
T Consensus 88 ~iD~lv~nAG~ 98 (272)
T PRK08159 88 KLDFVVHAIGF 98 (272)
T ss_pred CCcEEEECCcc
Confidence 68999999874
|
|
| >PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.14 Score=45.92 Aligned_cols=96 Identities=13% Similarity=0.125 Sum_probs=72.6
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...+++|++.-+.....
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l-------------------- 197 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDL-------------------- 197 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCH--------------------
Confidence 3567777777777776654458999999996 8999999999999999998766543221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 198 -~~~~~~ADIvVsAvGkp~~i~--~~~ik~gaiVIDVGin 234 (294)
T PRK14187 198 -ADYCSKADILVAAVGIPNFVK--YSWIKKGAIVIDVGIN 234 (294)
T ss_pred -HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEeccc
Confidence 223445899999999987443 4568999999999864
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.064 Score=49.61 Aligned_cols=77 Identities=22% Similarity=0.360 Sum_probs=50.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCch---------------------hHH---HHHHHcCCcE-E---e
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---------------------KKS---EAIERLGADS-F---L 233 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~---------------------~~~---~~~~~~g~~~-v---~ 233 (361)
...+|+|+|+|++|..++..+...|. ++++++...- |.. +.++++..+. + .
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~ 102 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV 102 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence 34679999999999999999999998 7777776531 111 1223343321 1 1
Q ss_pred cCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 234 VSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 234 ~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
..-..+.+.++..++|+|||+..+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 103 TDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred ccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 11123455566678999999998765
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.1 Score=47.10 Aligned_cols=76 Identities=22% Similarity=0.313 Sum_probs=51.5
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHc---CCcEE---ecCCCHHHHHHh-
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIERL---GADSF---LVSRDQDEMQAA- 244 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~---------~~~~~~~~~~---g~~~v---~~~~~~~~~~~~- 244 (361)
-.++++||.|+ +++|...++.+...|++|++++++. ++..++.+++ +.... .|-.+.+.+.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 35789999997 9999999999989999999987654 4433443333 33221 344444433222
Q ss_pred ------cCCccEEEEcCCC
Q 018094 245 ------MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ------~~g~d~vid~~g~ 257 (361)
.+.+|++|+++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 2479999999885
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.21 Score=43.45 Aligned_cols=75 Identities=20% Similarity=0.318 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHH---HcCCcE-Ee--cCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIE---RLGADS-FL--VSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~---~~g~~~-v~--~~~~~~~~~~~-------~~g 247 (361)
.+.++||.|+ |.+|...+..+...|++|+++.++.++ .....+ ..+... .+ |-.+.+.+.+. .++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999997 999999999999999999888776553 222222 223222 11 44444433322 236
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999875
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.067 Score=47.29 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.+++++|.|+ |.+|...++.+...|++ |+++.++.++...... +.+... ..|..+.+.+.++ .++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5678999998 99999999999999998 9888887665443322 334322 2355554433322 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999985
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.047 Score=44.59 Aligned_cols=74 Identities=24% Similarity=0.341 Sum_probs=48.2
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCC-eEEEEeCC--chhHHHHHHHc---CCcEE---ecCCCHHHHHHh-------cCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~-~Vi~~~~~--~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
+++||+|+ +++|...++.+...|+ +|+++.++ .++..++.+++ +.... .|..+.+.++++ .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 37899997 9999999999888877 66777776 34444443333 43221 233444333322 247
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++|.++|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999998874
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.085 Score=49.15 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=53.8
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CC--cEE-ecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GA--DSF-LVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~--g~--~~v-~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
..+.+|||+|+ |.+|...++.+...|.+|+++.++.++...+...+ +. ..+ .|..+.+.+.++..++|+||.++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 46778999997 99999999999999999999888766544443332 11 111 23344555666656799999998
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 74
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.094 Score=45.74 Aligned_cols=75 Identities=23% Similarity=0.352 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC-c---EEecCCC--HHH-------HHHhc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA-D---SFLVSRD--QDE-------MQAAM 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~-~---~v~~~~~--~~~-------~~~~~ 245 (361)
++.+++|.|+ |.+|...++.+...|++|++++++.++..++.+++ +. . .-.|..+ .+. +.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4578999997 99999999999999999999999887655444332 21 1 1122211 111 22222
Q ss_pred -CCccEEEEcCCC
Q 018094 246 -GTMDGIIDTVSA 257 (361)
Q Consensus 246 -~g~d~vid~~g~ 257 (361)
+.+|++|.++|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 468999999984
|
|
| >PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.15 Score=45.83 Aligned_cols=96 Identities=19% Similarity=0.153 Sum_probs=71.3
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++.-+.....
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l--------------------- 195 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL--------------------- 195 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 457777777777766553357999999996 8999999999999999998775443222
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+.+..+|+++-++|.+..+. .+.++++..++++|...
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin~ 233 (297)
T PRK14186 196 ASITREADILVAAAGRPNLIG--AEMVKPGAVVVDVGIHR 233 (297)
T ss_pred HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 223345799999999887443 45689999999998653
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.073 Score=46.65 Aligned_cols=76 Identities=22% Similarity=0.335 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE-E--ecCCCHHHHHHhc-------CCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS-F--LVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~~-------~g~ 248 (361)
.+.++||.|+ |.+|...+..+...|.+|++++++.++..++.+++ +.+. + .|-.+.+.+.+.. +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999988888999999999866544433322 2221 1 2444444333321 368
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|.++|..
T Consensus 85 d~vi~~ag~~ 94 (251)
T PRK12826 85 DILVANAGIF 94 (251)
T ss_pred CEEEECCCCC
Confidence 9999998663
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.1 Score=46.63 Aligned_cols=75 Identities=19% Similarity=0.269 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
+..++||.|+ |.+|...++.+...|++|++++++.++..++.+ ..+.... .|..+.+.+.++ .+++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3468999997 999999999998899999999887665444332 2343221 244444433322 2478
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999876
|
|
| >PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.14 Score=45.80 Aligned_cols=96 Identities=21% Similarity=0.253 Sum_probs=71.9
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+..+.+..|+...---.|++|+|+|. ..+|.=.+.++...|++|++.-+.... +
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~---------------------l 192 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD---------------------L 192 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 567777777777776553347999999996 899999999999999999876544322 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+.+..+|+++-++|.+..+ -.+.+++|..++++|...
T Consensus 193 ~~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin~ 230 (287)
T PRK14173 193 PAVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGINR 230 (287)
T ss_pred HHHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCcc
Confidence 22334589999999998744 355689999999998653
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.15 Score=44.18 Aligned_cols=68 Identities=21% Similarity=0.231 Sum_probs=47.6
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHHhc------CCccEEEEcC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAM------GTMDGIIDTV 255 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~------~g~d~vid~~ 255 (361)
++++||.|+ |.+|...++.+...|.+|+++.++.++. +..+ ...|..+.+.+.+.. .+.|++|.++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 568999998 9999999999999999999999876541 1221 123444444333221 2689999998
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 85
|
|
| >PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.15 Score=45.45 Aligned_cols=97 Identities=16% Similarity=0.208 Sum_probs=72.8
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++.-+....
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~--------------------- 192 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRN--------------------- 192 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCC---------------------
Confidence 3567887777777776653358999999996 899999999999999999876443221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+.+..+|+++-++|.+..+. .+.+++|..++++|...
T Consensus 193 l~~~~~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 193 LKQLTKEADILVVAVGVPHFIG--ADAVKPGAVVIDVGISR 231 (282)
T ss_pred HHHHHhhCCEEEEccCCcCccC--HHHcCCCcEEEEeeccc
Confidence 2223345799999999988443 45789999999998643
|
|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.094 Score=48.19 Aligned_cols=88 Identities=19% Similarity=0.242 Sum_probs=60.6
Q ss_pred CCCEEEEEccchHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~-~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~- 260 (361)
.|+++.|+|.|.+|...+++++ .+|.+|+..++.... +....++... .+ +.++....|+|.-+..-...
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~--~~~~~~~~~~----~~---l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHK--EAEERFNARY----CD---LDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCch--hhHHhcCcEe----cC---HHHHHHhCCEEEEeCCCChHH
Confidence 6799999999999999999998 899999987765322 1113444422 12 23444567888876654321
Q ss_pred ----HHHHHHhhccCCEEEEecC
Q 018094 261 ----LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ----~~~~~~~l~~~G~~v~~g~ 279 (361)
-...+..|+++..+|+++.
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~aR 237 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAGR 237 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECCC
Confidence 1346778888888888874
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.11 Score=46.13 Aligned_cols=75 Identities=17% Similarity=0.283 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.+.++||.|+ +.+|...+..+...|++|+++.++.++..+..+.+ +... ..|-.+.+.+.++ .+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5678999997 99999999988889999999988877655443333 4322 2344444433322 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.078 Score=48.59 Aligned_cols=74 Identities=23% Similarity=0.245 Sum_probs=53.0
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCC---c-E--EecCCCHHHHHHh-------cCCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA---D-S--FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~-------~~g~ 248 (361)
+.++||.|+ +++|...+..+...| .+|++++++.++..++.+++.. . . ..|-.+.+.+.+. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999998 999999999888889 8999999988776666665542 1 1 1344444433222 2469
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999874
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.12 Score=44.45 Aligned_cols=99 Identities=29% Similarity=0.339 Sum_probs=61.2
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHH---HHHcCCcEE-ecCCCHHHHHHhcCCccEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~---~~~~g~~~v-~~~~~~~~~~~~~~g~d~v 251 (361)
...++++++||-+|+| .|..++.+++..+. +|+.+..+++....+ .+++|.+.+ +...+..........||+|
T Consensus 72 ~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~I 150 (215)
T TIGR00080 72 LLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPLAPYDRI 150 (215)
T ss_pred HhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCcccCCCCEE
Confidence 3457899999999875 35566677777653 688888876644322 234554322 1111211111112479998
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
+-............+.|+++|+++..
T Consensus 151 i~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 151 YVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EEcCCcccccHHHHHhcCcCcEEEEE
Confidence 87655555567788999999998764
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.084 Score=46.63 Aligned_cols=74 Identities=20% Similarity=0.271 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...++.+...|++|++++++.++. ++.++ .+... ..|..+.+.+... .+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 9999999999999999999998887654 33333 33321 2344444433322 1478
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.12 Score=44.88 Aligned_cols=74 Identities=16% Similarity=0.305 Sum_probs=57.3
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE-RLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH 259 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~-~~g~~~v~-~~~~~~~~~~~~-~g~d~vid~~g~~~ 259 (361)
.++|.|+|.+|...++.+...|..|+++..++++..+... +++...+. +..+++.++++. ..+|+++-++|...
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 5789999999999999999999999999999988766433 45554432 345556666653 47999999999865
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.094 Score=42.64 Aligned_cols=77 Identities=22% Similarity=0.435 Sum_probs=59.6
Q ss_pred CCCEEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC---HHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD---QDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~-------~~g~d~v 251 (361)
+|-..||.| ++++|.+++..+...|+.|++.+-+..+-.+.++++|.+.++...+ +..++.. .+..|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 455568876 4999999999999999999999999998888999999887775433 3333322 1368999
Q ss_pred EEcCCCcc
Q 018094 252 IDTVSAVH 259 (361)
Q Consensus 252 id~~g~~~ 259 (361)
++|+|...
T Consensus 88 vncagia~ 95 (260)
T KOG1199|consen 88 VNCAGIAY 95 (260)
T ss_pred eeccceee
Confidence 99998753
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.077 Score=46.32 Aligned_cols=76 Identities=13% Similarity=0.229 Sum_probs=52.4
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
...+++||.|+ |.+|...+..+...|.+|++++++.++..++.+++ +... ..|-.+.+.+..+ .++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34578999997 99999999999999999999999877655543322 2221 1244444433222 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
.|+++.++|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999985
|
|
| >PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.18 Score=45.05 Aligned_cols=96 Identities=22% Similarity=0.259 Sum_probs=72.5
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..++...---.|++|+|+|- ..+|.=.+.++...+++|++.-+....
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~n--------------------- 193 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD--------------------- 193 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence 3567877777777776653358999999996 899999999999999999865543221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.+++|..++++|..
T Consensus 194 l~~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin 231 (282)
T PRK14166 194 LSLYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN 231 (282)
T ss_pred HHHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeccc
Confidence 2233445899999999988543 4568999999999964
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.083 Score=46.62 Aligned_cols=75 Identities=17% Similarity=0.314 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...+..+...|+++++++++.++...+.++ .+.+. ..|..+.+.+.+. .+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999997 9999999999999999999998887665444332 23221 2344554443322 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|+++.++|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.094 Score=48.14 Aligned_cols=75 Identities=21% Similarity=0.250 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---C----CcEE-ecCCCHHHHHHhcCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G----ADSF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g----~~~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
.|.+|||.|+ |.+|...+..+...|.+|+++.++.++...+.+.+ + ...+ .|..+.+.+.++..++|+||.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4689999997 99999999998889999998888765432221111 1 1111 133344455565668999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
+++.
T Consensus 84 ~A~~ 87 (322)
T PLN02986 84 TASP 87 (322)
T ss_pred eCCC
Confidence 9874
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.17 Score=49.29 Aligned_cols=73 Identities=25% Similarity=0.272 Sum_probs=50.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~----~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
..+++|+|+|+|.+|+.++..++..|.+|++++..+.. ..+.+++.|......... . ...++|+|+-+.|.
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~-~----~~~~~D~Vv~s~Gi 88 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGP-T----LPEDTDLVVTSPGW 88 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc-c----ccCCCCEEEECCCc
Confidence 35678999999999999999999999999998865431 112235567654433221 1 22468888888777
Q ss_pred cc
Q 018094 258 VH 259 (361)
Q Consensus 258 ~~ 259 (361)
..
T Consensus 89 ~~ 90 (480)
T PRK01438 89 RP 90 (480)
T ss_pred CC
Confidence 53
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.12 Score=50.37 Aligned_cols=72 Identities=17% Similarity=0.227 Sum_probs=49.7
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
.+.+|+|+|.|..|++++.+++..|++|++.++......++.+++|.......+..+.+ .++|+|+-+.|-+
T Consensus 14 ~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi~ 85 (473)
T PRK00141 14 LSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGWR 85 (473)
T ss_pred cCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCCC
Confidence 45679999999999999999999999999988765544444456676543322222322 3577777765554
|
|
| >PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.19 Score=45.03 Aligned_cols=95 Identities=13% Similarity=0.232 Sum_probs=70.7
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...+++|++.-+.... +
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~---------------------L 196 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHN---------------------L 196 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 567777777777766553357999999996 899999999999999999865543221 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 197 ~~~~~~ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin 233 (288)
T PRK14171 197 SSITSKADIVVAAIGSPLKLT--AEYFNPESIVIDVGIN 233 (288)
T ss_pred HHHHhhCCEEEEccCCCCccC--HHHcCCCCEEEEeecc
Confidence 233445899999999876443 4568999999999864
|
|
| >PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.16 Score=46.68 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=72.4
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+....|+...---.|++|+|+|- ..+|.=.+.++...+++|++.-+....
T Consensus 209 ~f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~n--------------------- 267 (364)
T PLN02616 209 LFVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN--------------------- 267 (364)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCC---------------------
Confidence 3567877777777766553348999999996 899999999999999999886543321
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.+++|..++++|..
T Consensus 268 l~~~~r~ADIVIsAvGkp~~i~--~d~vK~GAvVIDVGIn 305 (364)
T PLN02616 268 PEEITREADIIISAVGQPNMVR--GSWIKPGAVVIDVGIN 305 (364)
T ss_pred HHHHHhhCCEEEEcCCCcCcCC--HHHcCCCCEEEecccc
Confidence 2233445899999999987443 4568999999999864
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.12 Score=45.85 Aligned_cols=75 Identities=15% Similarity=0.294 Sum_probs=50.9
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHcCCc---EEecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGAD---SFLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~--~~~~~~~~~~g~~---~v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ +++|.+.++.+...|++|++++++. +...++.++++.. ...|-.+.+.+.++ .++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 7999999999989999999988653 3334454555431 12344444433322 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999999875
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.098 Score=46.23 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=50.5
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCC-c-E--EecCCCHHHHHHh-------cCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGA-D-S--FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~-~-~--v~~~~~~~~~~~~-------~~g 247 (361)
++++||.|+ |.+|...+..+...|++|++++++.++...+.++ .+. . . ..|-.+.+.+..+ .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999998 9999999999999999999999887655444332 221 1 1 1244444333322 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|+++.++|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 8999999874
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.11 Score=43.30 Aligned_cols=75 Identities=17% Similarity=0.289 Sum_probs=55.5
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEE---ecCCCHHHHH-------HhcCCccE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQ-------AAMGTMDG 250 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v---~~~~~~~~~~-------~~~~g~d~ 250 (361)
...++|.|+ +++|.+..|++...|++|.+.+.+....++.++.+|. ++. .|.+++..++ +..+.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 455677886 8999999999999999999999998877788888876 332 2333333222 22347999
Q ss_pred EEEcCCCc
Q 018094 251 IIDTVSAV 258 (361)
Q Consensus 251 vid~~g~~ 258 (361)
+++|+|-.
T Consensus 94 lVncAGIt 101 (256)
T KOG1200|consen 94 LVNCAGIT 101 (256)
T ss_pred EEEcCccc
Confidence 99999874
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.084 Score=48.20 Aligned_cols=99 Identities=20% Similarity=0.251 Sum_probs=69.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC----cE----EecCCCHHHHHHh-------c
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DS----FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~-------~ 245 (361)
-.+.+++|.|+ +++|..++..+...|++|+.++++.++.+++.+++.. .. .+|-.+.+.+++. .
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 35678899998 9999999999999999999999998776666555432 11 2344554444433 2
Q ss_pred CCccEEEEcCCCcc-----------------------cHHHHHHhhccC--CEEEEecCC
Q 018094 246 GTMDGIIDTVSAVH-----------------------PLMPLIGLLKSQ--GKLVLVGAP 280 (361)
Q Consensus 246 ~g~d~vid~~g~~~-----------------------~~~~~~~~l~~~--G~~v~~g~~ 280 (361)
.+.|+.|+++|.-. ..+..+..|+.. +|+|.++..
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~ 172 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI 172 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence 37899999877521 123355555544 799988763
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.13 Score=48.46 Aligned_cols=77 Identities=22% Similarity=0.349 Sum_probs=49.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC-------------------chhHHHHHH---HcCC-cEEecCC--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAIE---RLGA-DSFLVSR-- 236 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~-------------------~~~~~~~~~---~~g~-~~v~~~~-- 236 (361)
.+.+|+|+|+|++|..++..+...|. ++++++.. ..|...+.+ ++.. ..+..+.
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 45679999999999999999999998 77777765 122222222 2222 1221111
Q ss_pred -CHHHHHHhcCCccEEEEcCCCcc
Q 018094 237 -DQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 237 -~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+.+.+.++..++|+|+||..+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 12344445568999999999865
|
|
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.11 Score=47.40 Aligned_cols=85 Identities=29% Similarity=0.349 Sum_probs=57.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.|++|.|+|-|.+|...+++++.+|.+|++.++..... ..+.. .. .+.++....|+|.-+......
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~~----~~---~l~ell~~sDvv~lh~Plt~~T~ 211 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEYE----RV---SLEELLKTSDIISIHAPLNEKTK 211 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCce----ee---cHHHHhhcCCEEEEeCCCCchhh
Confidence 68999999999999999999999999999988753211 11111 11 233344456777776553321
Q ss_pred ---HHHHHHhhccCCEEEEecC
Q 018094 261 ---LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ---~~~~~~~l~~~G~~v~~g~ 279 (361)
-...+..|+++..+|+++.
T Consensus 212 ~li~~~~~~~Mk~~a~lIN~aR 233 (311)
T PRK08410 212 NLIAYKELKLLKDGAILINVGR 233 (311)
T ss_pred cccCHHHHHhCCCCeEEEECCC
Confidence 1346677788888887764
|
|
| >PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.17 Score=46.34 Aligned_cols=96 Identities=15% Similarity=0.125 Sum_probs=72.7
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...||+..+....|....---.|++|+|+|- ..+|.=.+.++...+++|++.-+....
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~n--------------------- 250 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKD--------------------- 250 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCC---------------------
Confidence 3567877777777776653357999999996 899999999999999999776543221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.+++|..++++|..
T Consensus 251 l~~~~~~ADIvIsAvGkp~~v~--~d~vk~GavVIDVGin 288 (345)
T PLN02897 251 PEQITRKADIVIAAAGIPNLVR--GSWLKPGAVVIDVGTT 288 (345)
T ss_pred HHHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence 1233455899999999987443 5568999999999864
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.069 Score=47.57 Aligned_cols=71 Identities=23% Similarity=0.320 Sum_probs=49.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEEc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIIDT 254 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid~ 254 (361)
+.+++|.|+ |.+|...++.+...|++|++++++.++.... -+... ..|..+.+.+.++ .+++|++|.+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 467999997 9999999999999999999999876543221 12222 2355555443332 2468999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 986
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.39 Score=41.90 Aligned_cols=104 Identities=24% Similarity=0.297 Sum_probs=69.1
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcC---CcEE-ecCCCHHHHHHhcCCccEEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG---ADSF-LVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g---~~~v-~~~~~~~~~~~~~~g~d~vi 252 (361)
....++|++||=+|+| +|-+|..+++..|- +|++++-++.-+....++.. ...+ +...+.+.+.--.+.||++.
T Consensus 46 ~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt 124 (238)
T COG2226 46 LLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVT 124 (238)
T ss_pred hhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEE
Confidence 3334689999887664 68889999998875 99999999876544434332 2211 12333333221123688888
Q ss_pred EcCCCc------ccHHHHHHhhccCCEEEEecCCCC
Q 018094 253 DTVSAV------HPLMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 253 d~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
-+.|-. .+++++.+.|+|+|+++.+.....
T Consensus 125 ~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 125 ISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred eeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 776653 357789999999999998877554
|
|
| >PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.2 Score=44.63 Aligned_cols=96 Identities=19% Similarity=0.230 Sum_probs=70.7
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...||+..+.+..++...---.|++|+|+|. ..+|.=.+.++...|++|++.-+....
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~--------------------- 193 (281)
T PRK14183 135 GFVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKD--------------------- 193 (281)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcC---------------------
Confidence 3567777777777776653358999999997 699999999999999999754322111
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 194 l~~~~~~ADIvV~AvGkp~~i~--~~~vk~gavvIDvGin 231 (281)
T PRK14183 194 LKAHTKKADIVIVGVGKPNLIT--EDMVKEGAIVIDIGIN 231 (281)
T ss_pred HHHHHhhCCEEEEecCcccccC--HHHcCCCcEEEEeecc
Confidence 1233445899999999987443 4568999999999864
|
|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.29 Score=37.53 Aligned_cols=87 Identities=20% Similarity=0.281 Sum_probs=57.0
Q ss_pred EEEEEccchHHHHHHHHHHHC--CCeEEEEeCCch-hHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPS-KKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
+|.|+|.|.+|.....-++.. +.+++.+.+.+. +...+.+++|.. . +.+.+.+.+. ..+|+|+.++....-..
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~~~~~ll~~-~~~D~V~I~tp~~~h~~ 77 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YTDLEELLAD-EDVDAVIIATPPSSHAE 77 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ESSHHHHHHH-TTESEEEEESSGGGHHH
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hhHHHHHHHh-hcCCEEEEecCCcchHH
Confidence 578999999999888666665 457776555544 555566788876 3 2333322221 37999999998876455
Q ss_pred HHHHhhccCCEEEEe
Q 018094 263 PLIGLLKSQGKLVLV 277 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~ 277 (361)
.+..+++.+- -+.+
T Consensus 78 ~~~~~l~~g~-~v~~ 91 (120)
T PF01408_consen 78 IAKKALEAGK-HVLV 91 (120)
T ss_dssp HHHHHHHTTS-EEEE
T ss_pred HHHHHHHcCC-EEEE
Confidence 5666665554 5555
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.093 Score=46.52 Aligned_cols=74 Identities=18% Similarity=0.211 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHH----cCCcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIER----LGADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
+++++||.|+ +++|...+..+...|++|+++.++ .++...+.++ .+... ..|-.+.+.+.++ .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 5789999998 999999999999999999888654 3333333222 23221 2344554433322 24
Q ss_pred CccEEEEcCC
Q 018094 247 TMDGIIDTVS 256 (361)
Q Consensus 247 g~d~vid~~g 256 (361)
.+|+++.++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999986
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.098 Score=46.62 Aligned_cols=72 Identities=24% Similarity=0.377 Sum_probs=49.7
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcEE---ecCCCHHHHHH-------hcCCccEE
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQA-------AMGTMDGI 251 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~-------~~~g~d~v 251 (361)
++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +.+.. .|-.+.+.+.+ ..+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899997 99999999999889999999998877655443332 32221 23334333222 22479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999885
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.023 Score=54.98 Aligned_cols=92 Identities=15% Similarity=0.173 Sum_probs=57.6
Q ss_pred CCCCCCCEEE----EEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHHhcCCccEEE
Q 018094 179 GLDKPGMHVG----VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 179 ~~~~~g~~Vl----I~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~g~d~vi 252 (361)
.++++|+.+| |+|+ |.+|.+++|+++..|++|+.+.+...+.... +..+.. .++|.+.......+..-
T Consensus 29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~~----- 102 (450)
T PRK08261 29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDPADLKAL----- 102 (450)
T ss_pred cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCHHHHHHH-----
Confidence 4457888877 7765 9999999999999999999987665432111 222333 34444332211111000
Q ss_pred EcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
...+...++.|.++|+++.++...
T Consensus 103 -----~~~~~~~l~~l~~~griv~i~s~~ 126 (450)
T PRK08261 103 -----YEFFHPVLRSLAPCGRVVVLGRPP 126 (450)
T ss_pred -----HHHHHHHHHhccCCCEEEEEcccc
Confidence 012556778888999999998754
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.25 Score=41.54 Aligned_cols=97 Identities=21% Similarity=0.211 Sum_probs=58.3
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHH---HHHHhc--CCcc
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSF-LVSRDQD---EMQAAM--GTMD 249 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~---~~~~~~--~g~d 249 (361)
....+++|++||.+|+|.-++......+..+ .+|+.++.++.. +..+.+.+ .+..+.+ .+.+.. +++|
T Consensus 26 ~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 26 KFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred HhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 3445689999999998766654444444433 489988887643 11233322 1322222 222222 3699
Q ss_pred EEEEcC-----CC------------cccHHHHHHhhccCCEEEEec
Q 018094 250 GIIDTV-----SA------------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 250 ~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g 278 (361)
+|+... |. ...+..+.+.|+++|+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999531 21 234667889999999999864
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.067 Score=47.88 Aligned_cols=77 Identities=26% Similarity=0.274 Sum_probs=57.7
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-Ee-------cCCCHHH----HHHh---c
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FL-------VSRDQDE----MQAA---M 245 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~-------~~~~~~~----~~~~---~ 245 (361)
++-.+++|.|. .++|++.+.-++..|+.|.++.++.++..+++++++... +. |-.+-+. ++++ .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45578999876 999999999999999999999999999999988877522 11 1111122 2222 2
Q ss_pred CCccEEEEcCCCc
Q 018094 246 GTMDGIIDTVSAV 258 (361)
Q Consensus 246 ~g~d~vid~~g~~ 258 (361)
+.+|.+|.|+|..
T Consensus 111 ~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 111 GPIDNLFCCAGVA 123 (331)
T ss_pred CCcceEEEecCcc
Confidence 4799999999974
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.16 Score=39.99 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=55.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC-CCHHHHHHhcCCccEEEEcCCCccc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS-RDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~-~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
.++.+++++|.| .|...+..+...|.+|++++.+++....+ ++.+.+.+.+. -+++ .++-.++|+|+..-.....
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~el 90 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRDL 90 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHHH
Confidence 456889999999 88766666668899999999998876555 66666544331 1111 1223467888877777663
Q ss_pred HHHHHHhhccCC
Q 018094 261 LMPLIGLLKSQG 272 (361)
Q Consensus 261 ~~~~~~~l~~~G 272 (361)
....++..++-|
T Consensus 91 ~~~~~~la~~~~ 102 (134)
T PRK04148 91 QPFILELAKKIN 102 (134)
T ss_pred HHHHHHHHHHcC
Confidence 333444333333
|
|
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.27 Score=44.26 Aligned_cols=128 Identities=24% Similarity=0.303 Sum_probs=71.7
Q ss_pred cCceEECCCCCCcccccccchhhhhh--hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 018094 146 EHFVVRIPEGTPLDATAPLLCAGITV--YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSE 222 (361)
Q Consensus 146 ~~~v~~iP~~~~~~~aa~l~~~~~~a--~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~ 222 (361)
...++++.+++.+...- -..|+ ..++... +++|.+||=+|+| .|.+++..+| +|+ +|+.++-.+...+.
T Consensus 129 ~~~~i~lDPGlAFGTG~----HpTT~lcL~~Le~~--~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~a 200 (300)
T COG2264 129 DELNIELDPGLAFGTGT----HPTTSLCLEALEKL--LKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEA 200 (300)
T ss_pred CceEEEEccccccCCCC----ChhHHHHHHHHHHh--hcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHH
Confidence 46678888887665432 11222 2334444 4699999988874 3555555444 476 68887776654322
Q ss_pred H---HHHcCCcEEecCCCHHHHHHhc-CCccEEEEcCCCcc---cHHHHHHhhccCCEEEEecCCC
Q 018094 223 A---IERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 223 ~---~~~~g~~~v~~~~~~~~~~~~~-~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
. ++.-+.+..+............ +.+|+|+-++=... ........++|+|++++.|-..
T Consensus 201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~ 266 (300)
T COG2264 201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILE 266 (300)
T ss_pred HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehH
Confidence 2 2233333211111111112222 37999997764432 2345677899999999998654
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.17 Score=49.29 Aligned_cols=72 Identities=15% Similarity=0.282 Sum_probs=52.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.+.+++|+|+|++|.+++..+...|+++++..++.++.+++.++++... ++..+ ... ...+|+|++|+....
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~~-~~~~~---~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGKA-FPLES---LPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccce-echhH---hcc-cCCCCEEEEcCCCCC
Confidence 5778999999999999999999999999998888777766666654322 22111 111 247899999987654
|
|
| >PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.22 Score=44.42 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=71.5
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
.+||+..+.+..++...---.|++|+|+|- ..+|.=.+.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~n---------------------l 194 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTAD---------------------L 194 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467777777777766553358999999996 899999999999999998876443221 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+.+..+|+++-++|.+..+. .+.++++..++++|...
T Consensus 195 ~~~~~~ADIvI~AvGk~~~i~--~~~ik~gaiVIDvGin~ 232 (282)
T PRK14182 195 AGEVGRADILVAAIGKAELVK--GAWVKEGAVVIDVGMNR 232 (282)
T ss_pred HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEeecee
Confidence 233445899999999876443 45689999999998643
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.094 Score=46.98 Aligned_cols=74 Identities=19% Similarity=0.285 Sum_probs=50.7
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCC--c-E--EecCCCHHHHHH---h---cCCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--D-S--FLVSRDQDEMQA---A---MGTM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~--~-~--v~~~~~~~~~~~---~---~~g~ 248 (361)
+.++||.|+ |.+|...+..+...|++|++++++.++..++.+. .+. . . ..|..+.+.+.+ . .+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 567999998 9999999999988999999999887665444322 221 1 1 224445443322 2 2478
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|+++.++|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.097 Score=51.56 Aligned_cols=92 Identities=20% Similarity=0.129 Sum_probs=60.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.++++||+|+|++|.+++..+...|++|+++.++.++...++++++... +...+ .........|+++++++.....
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~~-~~~~~--~~~~~~~~~diiINtT~vGm~~~ 454 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQA-LTLAD--LENFHPEEGMILANTTSVGMQPN 454 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCce-eeHhH--hhhhccccCeEEEecccCCCCCC
Confidence 4678999999999999999999999999999888888777777775432 22211 1111223578999877543200
Q ss_pred ----HHHHHhhccCCEEEEe
Q 018094 262 ----MPLIGLLKSQGKLVLV 277 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~ 277 (361)
......+++.+.++++
T Consensus 455 ~~~~pl~~~~l~~~~~v~D~ 474 (529)
T PLN02520 455 VDETPISKHALKHYSLVFDA 474 (529)
T ss_pred CCCCcccHhhCCCCCEEEEe
Confidence 0122345666655555
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.082 Score=53.67 Aligned_cols=77 Identities=21% Similarity=0.324 Sum_probs=52.9
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch--------------------hHHHHHHHcCCcEEecCCC--HH
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--------------------KKSEAIERLGADSFLVSRD--QD 239 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~--------------------~~~~~~~~~g~~~v~~~~~--~~ 239 (361)
..+++|+|+|+|+.|+.++..++..|.+|+++...+. +..+..+++|.+...+..- .-
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 3588999999999999999999999999999886532 1233346677654332211 11
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 018094 240 EMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~ 258 (361)
.+..+..++|.||.++|..
T Consensus 405 ~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 405 SLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 1223334799999998864
|
|
| >COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.26 E-value=0.4 Score=44.81 Aligned_cols=60 Identities=25% Similarity=0.297 Sum_probs=44.7
Q ss_pred cccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 158 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
.++|-...+.+.+- .+++....--+|.+|.|.|.|.+|+.+++.+...|++|+++..+..
T Consensus 182 r~~aTg~Gv~~~~~-~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GAkvva~sds~g 241 (411)
T COG0334 182 RSEATGYGVFYAIR-EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGAKVVAVSDSKG 241 (411)
T ss_pred CCcccceehHHHHH-HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 34454455444333 4454444224899999999999999999999999999999998876
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.12 Score=45.35 Aligned_cols=73 Identities=21% Similarity=0.264 Sum_probs=50.5
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHH-------HHhcCCccE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEM-------QAAMGTMDG 250 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~-------~~~~~g~d~ 250 (361)
.++||.|+ |.+|...+..+...|.+|++++++.++...+.+.+ +... ..|..+.+.+ .+..++.|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 57999997 99999999999889999999999877655543322 2221 1244554422 222347899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|-+++.
T Consensus 82 vi~~a~~ 88 (255)
T TIGR01963 82 LVNNAGI 88 (255)
T ss_pred EEECCCC
Confidence 9988875
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type | Back alignment and domain information |
|---|
Probab=95.25 E-value=0.2 Score=46.15 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=68.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHc---CCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
+...++.|+|+|..|.+.+..+.. ... +|.+.+++.++...+++++ |.. +....+ ..++..+.|+|+-|+.
T Consensus 126 ~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~-v~~~~~---~~eav~~aDiVitaT~ 201 (325)
T TIGR02371 126 KDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVP-VRAATD---PREAVEGCDILVTTTP 201 (325)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCc-EEEeCC---HHHHhccCCEEEEecC
Confidence 556889999999999987766554 344 8999999988877666644 432 111222 2344468999999886
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCC-CcccChH
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF 289 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 289 (361)
+.. -......++++-.+..+|.... ..+++..
T Consensus 202 s~~-P~~~~~~l~~g~~v~~vGs~~p~~~Eld~~ 234 (325)
T TIGR02371 202 SRK-PVVKADWVSEGTHINAIGADAPGKQELDPE 234 (325)
T ss_pred CCC-cEecHHHcCCCCEEEecCCCCcccccCCHH
Confidence 654 2223456899999999997654 3455543
|
This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity. |
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.11 Score=45.52 Aligned_cols=75 Identities=20% Similarity=0.300 Sum_probs=51.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE-E--ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS-F--LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~g~ 248 (361)
++.++||.|+ |.+|...+..+...|++|++++++.++..++.+. .+... + .|..+.+.+.++ .+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 9999999999999999999999887765444322 23221 1 233444433332 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999974
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.11 Score=46.49 Aligned_cols=75 Identities=24% Similarity=0.341 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHH---HHcCCcE---EecCCCHHHHHHh----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADS---FLVSRDQDEMQAA---- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-------~~~~~---~~~g~~~---v~~~~~~~~~~~~---- 244 (361)
.+.++||.|+ |.+|...+..+...|++|+++.++.+. ..+.. +..+.+. ..|..+.+.+.++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4578999997 999999999999999999999987542 12222 2233322 1354555443332
Q ss_pred ---cCCccEEEEcCCC
Q 018094 245 ---MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ---~~g~d~vid~~g~ 257 (361)
.+.+|++|.++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 2479999999885
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.13 Score=44.63 Aligned_cols=100 Identities=24% Similarity=0.308 Sum_probs=62.3
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHc----CCcEEecCCCHHHHHHhcCCccE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~g~d~ 250 (361)
....++++++||-+|+|. |..+..+++..+ .+++.++.+++....+ ++. +....+...+........+.+|+
T Consensus 13 ~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a-~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 90 (241)
T PRK08317 13 ELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALA-KERAAGLGPNVEFVRGDADGLPFPDGSFDA 90 (241)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-HHHhhCCCCceEEEecccccCCCCCCCceE
Confidence 344568899999999875 888888888773 5899888887654433 332 11111111111111111246898
Q ss_pred EEEcCCC------cccHHHHHHhhccCCEEEEec
Q 018094 251 IIDTVSA------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~g~------~~~~~~~~~~l~~~G~~v~~g 278 (361)
|+-...- ...+..+.++|+++|.++...
T Consensus 91 v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 91 VRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 8864221 224677889999999998775
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.15 Score=47.09 Aligned_cols=86 Identities=22% Similarity=0.296 Sum_probs=60.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++..+..... .. .. ..+.++....|+|+-+......
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence 57789999999999999999999999999998775432111 00 10 1233445578999988876531
Q ss_pred ---HHHHHHhhccCCEEEEecC
Q 018094 261 ---LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ---~~~~~~~l~~~G~~v~~g~ 279 (361)
....+..++++..+|+++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 1245567888888888875
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.37 Score=42.20 Aligned_cols=99 Identities=15% Similarity=0.182 Sum_probs=61.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-hhHHHH---HHHcCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEA---IERLGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~---~~~~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.+.++||.|+ |.+|...+..+...|++|+++.++. +..... .++.+... ..|..+.+.+.++ .++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 3578999997 9999999998889999988777543 222221 22333321 1344444332222 247
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCCC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+|++|.++|... ..+.+.+.++..|+++.++...
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 143 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA 143 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence 899999998411 1223445566788999987643
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.14 Score=49.39 Aligned_cols=73 Identities=25% Similarity=0.326 Sum_probs=49.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch-hHHHH---HHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEA---IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~---~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
.+++|+|+|+|.+|+.++..+...|++|++++.... ...+. +++.|.+.+ .....+ +..+++|+|+.+.|..
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~-~~~~~~---~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELV-LGEYPE---EFLEGVDLVVVSPGVP 79 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEE-eCCcch---hHhhcCCEEEECCCCC
Confidence 468899999988999999999999999999988752 22111 234455432 222222 2335799999998864
Q ss_pred c
Q 018094 259 H 259 (361)
Q Consensus 259 ~ 259 (361)
.
T Consensus 80 ~ 80 (450)
T PRK14106 80 L 80 (450)
T ss_pred C
Confidence 3
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.13 Score=45.75 Aligned_cols=75 Identities=15% Similarity=0.240 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADS--FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ + ++|.+.++.+...|++|+++.+++. ...++..+.+... ..|-.+.+.+.++ .+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 4688999997 3 7999999999889999998877631 1222222223211 2344554433322 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999974
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.12 Score=45.13 Aligned_cols=75 Identities=15% Similarity=0.203 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHc----CCc---EEecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERL----GAD---SFLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~----g~~---~v~~~~~~~~~~~~-------~~ 246 (361)
.+.++||.|+ |.+|...+..+...|++|++++++.++ ..++.+++ +.. ...|..+.+.+.++ .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999998 999999999998899999999986433 22222221 111 12344554443332 23
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 85 ~~d~vi~~ag~ 95 (249)
T PRK09135 85 RLDALVNNASS 95 (249)
T ss_pred CCCEEEECCCC
Confidence 68999999984
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.1 Score=45.82 Aligned_cols=75 Identities=20% Similarity=0.320 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
++.++||.|+ |.+|...+..+...|++|+++ .++.++..++.+ ..+.... .|-.+.+.+.++ .++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 999999999999999998774 555544434333 2343221 344444433322 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999999875
|
|
| >smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.32 Score=39.25 Aligned_cols=97 Identities=20% Similarity=0.329 Sum_probs=58.5
Q ss_pred EEEEEccchHHHHHHHHHHH-CCCeEEEEeCC--chhHHHHHH---HcCC---cE-------Ee--------cCCCHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKA-MGVKVTVISTS--PSKKSEAIE---RLGA---DS-------FL--------VSRDQDEM 241 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~-~g~~Vi~~~~~--~~~~~~~~~---~~g~---~~-------v~--------~~~~~~~~ 241 (361)
+|.|+|.|.+|...++.+.. .+.+++.+... .+....+++ ..|. +. ++ ..+++..+
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~~ 81 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPANL 81 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHHC
Confidence 47889999999988888775 46677776652 222222322 1121 10 11 11122222
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
.+..-++|+|+||.|.-.+.+.+...+..|-+-|.++.+..
T Consensus 82 ~w~~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap~~ 122 (149)
T smart00846 82 PWKELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAPAK 122 (149)
T ss_pred cccccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCCCC
Confidence 23223799999999886556667778888877777776543
|
GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.26 Score=38.95 Aligned_cols=95 Identities=21% Similarity=0.346 Sum_probs=55.2
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCch-------------------h---HHHHHHHcCC-cEEecC---C
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------K---KSEAIERLGA-DSFLVS---R 236 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~-------------------~---~~~~~~~~g~-~~v~~~---~ 236 (361)
..+|+|+|+|++|...+..+-..|. ++++++...- | ..+.++++.. ..+... -
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 3679999999999999998888898 7777775321 1 1111223321 122111 1
Q ss_pred CHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCE-EEEec
Q 018094 237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLVG 278 (361)
Q Consensus 237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~-~v~~g 278 (361)
.++...++..++|+||+|..+........+.++..+. ++..+
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 2334444446899999999886633344445555554 44433
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.17 Score=43.59 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=60.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe----------------cCCCHHHHH-Hh
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL----------------VSRDQDEMQ-AA 244 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~----------------~~~~~~~~~-~~ 244 (361)
.++.+||+.|+| .|.-++.+|+ .|.+|+.++-++...+.+.++.+..... ...+..... ..
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 567799999885 4666777764 6999999999988776654544432100 000100000 11
Q ss_pred cCCccEEEEcCCCc--------ccHHHHHHhhccCCEEEEecC
Q 018094 245 MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 245 ~~g~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g~ 279 (361)
.+.+|.|+|+..-. ..+....++|+|+|+++.++.
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 23589999975421 125578889999999777754
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.11 Score=46.04 Aligned_cols=75 Identities=12% Similarity=0.242 Sum_probs=48.6
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADS--FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ +++|.+.++.+...|++|+++.+.+. ...++.++++... ..|-.+.+.+.++ .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5678999983 58999999999999999998765431 2223323334222 2344454433322 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++++++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999875
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.1 Score=45.74 Aligned_cols=77 Identities=27% Similarity=0.444 Sum_probs=48.8
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHH----------------------HHHHHcCCcE-E--ec-CC
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS----------------------EAIERLGADS-F--LV-SR 236 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~----------------------~~~~~~g~~~-v--~~-~~ 236 (361)
+.+|+|+|+|++|..+++.+...|. ++++++...-+.. +.++++.... + ++ .-
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i 103 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL 103 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 3679999999999999999999998 6666665432211 1122333211 1 11 11
Q ss_pred CHHHHHHhcCCccEEEEcCCCccc
Q 018094 237 DQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 237 ~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
+.+.+.++..++|+|+||..+..+
T Consensus 104 ~~~~~~~~~~~~DlVvd~~D~~~~ 127 (240)
T TIGR02355 104 DDAELAALIAEHDIVVDCTDNVEV 127 (240)
T ss_pred CHHHHHHHhhcCCEEEEcCCCHHH
Confidence 123445555689999999998763
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.13 Score=44.89 Aligned_cols=83 Identities=24% Similarity=0.412 Sum_probs=50.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHH-----------------------HHHcCCcEEec-C--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA-----------------------IERLGADSFLV-S-- 235 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~-----------------------~~~~g~~~v~~-~-- 235 (361)
.+.+|+|+|+|++|..++..+...|. ++++++....+...+ ++++..+..+. +
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~ 105 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG 105 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence 34679999999999999999999998 677766432211111 12333221111 1
Q ss_pred -CCHHHHHHhcCCccEEEEcCCCcccHHHHHH
Q 018094 236 -RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIG 266 (361)
Q Consensus 236 -~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~ 266 (361)
-+++.+.++..++|+||||..+.. .+..+.
T Consensus 106 ~~~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~ 136 (231)
T PRK08328 106 RLSEENIDEVLKGVDVIVDCLDNFE-TRYLLD 136 (231)
T ss_pred cCCHHHHHHHHhcCCEEEECCCCHH-HHHHHH
Confidence 112334444568999999999865 444443
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.19 Score=44.69 Aligned_cols=99 Identities=25% Similarity=0.420 Sum_probs=57.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhH----------------------HHHHHHcCCc-EEecCC--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK----------------------SEAIERLGAD-SFLVSR-- 236 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~----------------------~~~~~~~g~~-~v~~~~-- 236 (361)
.+.+|+|+|.|++|..++..+...|. ++++++...... .+..+++..+ .+....
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 45679999999999999999999996 777777542211 1111222221 121111
Q ss_pred -CHHHHHHhc-CCccEEEEcCCCcccHHHHHHhhc-cCCEEEEecCCC
Q 018094 237 -DQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLVGAPE 281 (361)
Q Consensus 237 -~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~ 281 (361)
.++...++. ..+|+||||.+....-....+.+. .+=.++..|..+
T Consensus 109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 123344443 479999999998543333333433 344566665544
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.085 Score=53.71 Aligned_cols=75 Identities=20% Similarity=0.283 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcE----EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS----FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++.....+++ +... ..|-.+.+.+.++ .+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4789999997 99999999999999999999999877655443333 3211 2344454443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 79999999985
|
|
| >PRK06407 ornithine cyclodeaminase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.16 Score=46.15 Aligned_cols=104 Identities=16% Similarity=0.110 Sum_probs=72.1
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHcC----CcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+..+++.|+|+|..+.+.++.+.. ... +|.+..++.++...+++++. .... ... ...+...+.|+|+-++
T Consensus 115 ~da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v~-~~~---~~~eav~~aDIV~taT 190 (301)
T PRK06407 115 KNVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDIR-PVD---NAEAALRDADTITSIT 190 (301)
T ss_pred cCCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeC---CHHHHHhcCCEEEEec
Confidence 456788999999999988887775 455 89999999988777766653 2221 112 2344456799999888
Q ss_pred CCcccHHHHHHhhccCCEEEEecCCCCC-cccChHH
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFS 290 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~ 290 (361)
.+..-+ --.+.++|+-.+..+|..... .+++...
T Consensus 191 ~s~~P~-~~~~~l~pg~hV~aiGs~~p~~~El~~~~ 225 (301)
T PRK06407 191 NSDTPI-FNRKYLGDEYHVNLAGSNYPNRREAEHSV 225 (301)
T ss_pred CCCCcE-ecHHHcCCCceEEecCCCCCCcccCCHHH
Confidence 776522 234568998899999986543 4565543
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.11 Score=48.10 Aligned_cols=77 Identities=25% Similarity=0.384 Sum_probs=50.4
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCch---------------------hHH---HHHHHcCCcEEec---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---------------------KKS---EAIERLGADSFLV--- 234 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~---------------------~~~---~~~~~~g~~~v~~--- 234 (361)
...+|+|+|+|++|..+++.+...|. ++++++...- |.. +.++++..+.-+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 34669999999999999999999999 8888876521 111 1223343321111
Q ss_pred -CCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 235 -SRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 235 -~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.-..+.+.++..++|+|+||..+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 103 QDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 1123445555678999999999865
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.18 Score=44.48 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.+.++||.|+ +.+|...++.+...|++|+++.++.++ ..++.++ .+... ..|-.+++.+.+. .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 999999999999999999999886542 2333232 34321 1244444433322 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999985
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.13 Score=41.53 Aligned_cols=88 Identities=24% Similarity=0.298 Sum_probs=56.0
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC--------HHHHHHhcCCccEEEEcCCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--------QDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--------~~~~~~~~~g~d~vid~~g~~ 258 (361)
|+|+|+|.+|...+..++..|.+|.++.+.. +... .++-|........+ ..........+|++|-|+-..
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEA-IKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY 78 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHH-HHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHh-hhheeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence 6899999999999999988999999999987 5444 35555422111100 000112345799999998776
Q ss_pred ccHHHHHHhh----ccCCEEEEe
Q 018094 259 HPLMPLIGLL----KSQGKLVLV 277 (361)
Q Consensus 259 ~~~~~~~~~l----~~~G~~v~~ 277 (361)
. ...+++.+ .++..++.+
T Consensus 79 ~-~~~~l~~l~~~~~~~t~iv~~ 100 (151)
T PF02558_consen 79 Q-LEQALQSLKPYLDPNTTIVSL 100 (151)
T ss_dssp G-HHHHHHHHCTGEETTEEEEEE
T ss_pred c-hHHHHHHHhhccCCCcEEEEE
Confidence 5 55555544 444466665
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.12 Score=47.14 Aligned_cols=74 Identities=20% Similarity=0.220 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc----------hhHHHHH---HHcCCcE---EecCCCHHHHHHh-
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAI---ERLGADS---FLVSRDQDEMQAA- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~----------~~~~~~~---~~~g~~~---v~~~~~~~~~~~~- 244 (361)
.++++||.|+ +++|.++++.+...|++|++++++. ++..++. +..|... ..|-.+.+.+.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4789999998 8999999999999999999998763 2322222 2334322 1344444433322
Q ss_pred ------cCCccEEEEcC-C
Q 018094 245 ------MGTMDGIIDTV-S 256 (361)
Q Consensus 245 ------~~g~d~vid~~-g 256 (361)
.+.+|++|+++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 24699999998 6
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.12 Score=46.96 Aligned_cols=85 Identities=20% Similarity=0.307 Sum_probs=58.0
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.|++|.|+|-|.+|...+++++.+|.+|++..+.... .+.... .. .+.++....|+|+.+.......
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~--~~---~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSI--YM---EPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCcccc--cC---CHHHHHhhCCEEEECCCCCchhh
Confidence 6899999999999999999999999999999876321 122111 11 1233344578888776653311
Q ss_pred ----HHHHHhhccCCEEEEecC
Q 018094 262 ----MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~g~ 279 (361)
...+..|+++..+|+++.
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 245667788888887764
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.13 Score=45.02 Aligned_cols=77 Identities=17% Similarity=0.291 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCc--EE--ecCC--CHHH-------HHH
Q 018094 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD--SF--LVSR--DQDE-------MQA 243 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~--~v--~~~~--~~~~-------~~~ 243 (361)
..++.++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +.. .+ .+.. +.+. +.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 457889999997 99999999988889999999999876654443332 321 11 1221 2222 222
Q ss_pred hcCCccEEEEcCCC
Q 018094 244 AMGTMDGIIDTVSA 257 (361)
Q Consensus 244 ~~~g~d~vid~~g~ 257 (361)
..+.+|++|.+++.
T Consensus 89 ~~~~id~vi~~Ag~ 102 (247)
T PRK08945 89 QFGRLDGVLHNAGL 102 (247)
T ss_pred HhCCCCEEEECCcc
Confidence 22478999998875
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.22 Score=45.40 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=30.1
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
.|+++||.|+ .++|.++++.+...|++|++ .+..+
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~ 45 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVP 45 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcc
Confidence 5889999998 89999999999999999988 44433
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.14 Score=42.06 Aligned_cols=89 Identities=21% Similarity=0.309 Sum_probs=56.6
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 265 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~ 265 (361)
+|-++|.|.+|...+.-+...|.+|++.+++.++..++. +.|+... .+. .++....|+||-|+......+..+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~---~s~---~e~~~~~dvvi~~v~~~~~v~~v~ 75 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA---DSP---AEAAEQADVVILCVPDDDAVEAVL 75 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE---SSH---HHHHHHBSEEEE-SSSHHHHHHHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh---hhh---hhHhhcccceEeecccchhhhhhh
Confidence 578899999999999999999999999999988877774 3454322 121 222234699999988865454433
Q ss_pred ------HhhccCCEEEEecCCC
Q 018094 266 ------GLLKSQGKLVLVGAPE 281 (361)
Q Consensus 266 ------~~l~~~G~~v~~g~~~ 281 (361)
..++++..+++++..+
T Consensus 76 ~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhHHhhccccceEEEecCCcc
Confidence 3345666777776543
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.16 Score=48.18 Aligned_cols=99 Identities=19% Similarity=0.233 Sum_probs=63.3
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHH------HHHHHc-CCcEE-ecCCCHHHHHHhcC----Cc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS------EAIERL-GADSF-LVSRDQDEMQAAMG----TM 248 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~------~~~~~~-g~~~v-~~~~~~~~~~~~~~----g~ 248 (361)
..+.+|||.|+ |.+|...+..+...|.+|++++++..+.. +..+.. +.+.+ .|..+.+.+.+... ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 56789999998 99999999999889999999998764321 111112 23322 35555565555432 69
Q ss_pred cEEEEcCCCcc------------cHHHHHHhhccC--CEEEEecCC
Q 018094 249 DGIIDTVSAVH------------PLMPLIGLLKSQ--GKLVLVGAP 280 (361)
Q Consensus 249 d~vid~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~ 280 (361)
|+||.|++... .....++.++.. +++|.++..
T Consensus 138 D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 138 DVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred cEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 99999987421 012334444333 478877653
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.17 Score=48.69 Aligned_cols=87 Identities=26% Similarity=0.354 Sum_probs=57.5
Q ss_pred EEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 186 HVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 186 ~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
+|.|+| .|.+|.+.+..++..|.+|++++++.++..+.++++|... ..+ ..+....+|+||-|+.... ....
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~---~~~---~~e~~~~aDvVIlavp~~~-~~~v 74 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY---AND---NIDAAKDADIVIISVPINV-TEDV 74 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee---ccC---HHHHhccCCEEEEecCHHH-HHHH
Confidence 588888 5999999999999999999999988776556666777531 111 1122345788888777543 2222
Q ss_pred ----HHhhccCCEEEEecC
Q 018094 265 ----IGLLKSQGKLVLVGA 279 (361)
Q Consensus 265 ----~~~l~~~G~~v~~g~ 279 (361)
...++++..++.++.
T Consensus 75 l~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 75 IKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHHhhCCCCCEEEEccc
Confidence 233455666667764
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.11 Score=46.03 Aligned_cols=75 Identities=16% Similarity=0.278 Sum_probs=49.8
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHHcCCcE--EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTS---PSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~---~~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ +++|.+.++.+...|++|+++.+. .++..++.++++... ..|-.+++.+.++ .+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4788999984 589999999998899999887543 233344444555322 2344454433322 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++++++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999875
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.096 Score=46.12 Aligned_cols=70 Identities=24% Similarity=0.284 Sum_probs=49.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cE-EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~-v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++ +..+. .. ..|..+.+.+.++ .+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4788999997 999999999999999999999887654 11222 11 2344444433322 2468999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999874
|
|
| >PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.29 Score=43.84 Aligned_cols=97 Identities=19% Similarity=0.311 Sum_probs=71.1
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~----g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
..+||+..+.+..|+...---.|++|+|+|- ..+|.=.+.++... +++|++.-+....
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~----------------- 193 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSEN----------------- 193 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCC-----------------
Confidence 3567877777777776653357999999996 89999999999888 7888764432211
Q ss_pred CHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|...
T Consensus 194 ----l~~~~~~ADIvV~AvG~p~~i~--~~~ik~GavVIDvGin~ 232 (287)
T PRK14181 194 ----LTEILKTADIIIAAIGVPLFIK--EEMIAEKAVIVDVGTSR 232 (287)
T ss_pred ----HHHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecccc
Confidence 2233445899999999987443 45689999999998643
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.15 Score=43.99 Aligned_cols=95 Identities=19% Similarity=0.123 Sum_probs=58.1
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe----------------cCCC-HHHHHH
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL----------------VSRD-QDEMQA 243 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~----------------~~~~-~~~~~~ 243 (361)
..++.+||+.|+| .|.-++.||. .|.+|+.++-++...+.+.++.+..... ...+ .+....
T Consensus 35 ~~~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~ 112 (218)
T PRK13255 35 LPAGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAA 112 (218)
T ss_pred CCCCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCcc
Confidence 3567789999875 3566666664 7999999999988776655554432110 0000 000001
Q ss_pred hcCCccEEEEcCCCcc--------cHHHHHHhhccCCEEEEe
Q 018094 244 AMGTMDGIIDTVSAVH--------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 244 ~~~g~d~vid~~g~~~--------~~~~~~~~l~~~G~~v~~ 277 (361)
..+.+|.|+|.+--.+ .+....++|+|+|+++.+
T Consensus 113 ~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 113 DLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred cCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 1136899999653211 256678889999976554
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.1 Score=40.43 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=55.3
Q ss_pred EEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCch-hHHHHHHHcC----CcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPS-KKSEAIERLG----ADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~-~~~~~~~~~g----~~~v-~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
+|.|+|+ |.+|...++++... .++++.+..+.. ....+...++ ...+ +...+.+. ..++|+||.|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEE----LSDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHH----HTTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhH----hhcCCEEEecCch
Confidence 5889997 99999999999875 446555555544 3223322222 2121 22112121 2679999999998
Q ss_pred cccHHHHHHhhccCCEEEEecC
Q 018094 258 VHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
....+..-..++.+-++++.+.
T Consensus 77 ~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 77 GASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp HHHHHHHHHHHHTTSEEEESSS
T ss_pred hHHHHHHHHHhhCCcEEEeCCH
Confidence 7655555666677778888854
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.26 Score=44.18 Aligned_cols=95 Identities=21% Similarity=0.222 Sum_probs=71.1
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHH----CCCeEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA----MGVKVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~----~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
..||+..+.+..|+...---.|++|+|+|. ..+|.=.+.++.. .+++|++.-+....
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~------------------ 197 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPD------------------ 197 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchh------------------
Confidence 567877777777776653357999999996 8999999999988 78998887654322
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. -+.++++..++++|..
T Consensus 198 ---l~~~~~~ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~ 235 (286)
T PRK14184 198 ---LAEECREADFLFVAIGRPRFVT--ADMVKPGAVVVDVGIN 235 (286)
T ss_pred ---HHHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeee
Confidence 2223345899999999987544 3567999999999864
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.15 Score=44.42 Aligned_cols=71 Identities=25% Similarity=0.329 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCc--E-EecCCCHHHHHHhc---CCccEEEEc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--S-FLVSRDQDEMQAAM---GTMDGIIDT 254 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~--~-v~~~~~~~~~~~~~---~g~d~vid~ 254 (361)
.+.++||+|+ |.+|...++.+...|. +|+++.++.++..+ .+.. . ..|..+.+.+.++. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 4578999997 9999999999999999 99999988765432 3322 1 13445555444433 368999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 987
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.21 Score=45.82 Aligned_cols=70 Identities=24% Similarity=0.244 Sum_probs=52.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.+.+|.|+|.|.+|.+.++-++..|.+|++..+...+..+.+++.|.... + ..++....|+|+-++....
T Consensus 16 ~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~----s---~~eaa~~ADVVvLaVPd~~ 85 (330)
T PRK05479 16 KGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVL----T---VAEAAKWADVIMILLPDEV 85 (330)
T ss_pred CCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeC----C---HHHHHhcCCEEEEcCCHHH
Confidence 56889999999999999999999999998877775555555566675321 1 2334456899999988654
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.13 Score=44.19 Aligned_cols=34 Identities=26% Similarity=0.455 Sum_probs=28.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~ 216 (361)
...+|+|+|+|++|..+++.+...|. ++++++..
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34579999999999999999999998 67777765
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.31 Score=42.73 Aligned_cols=70 Identities=19% Similarity=0.209 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|...+..+...|++|++++++. . +..+... ..|-.+.+.+.+. .+.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 9999999999999999999998775 1 2223211 1244444433332 2468999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
|.++|..
T Consensus 81 i~~ag~~ 87 (252)
T PRK08220 81 VNAAGIL 87 (252)
T ss_pred EECCCcC
Confidence 9998863
|
|
| >PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.29 Score=43.83 Aligned_cols=96 Identities=23% Similarity=0.321 Sum_probs=70.7
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHH--CCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~--~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
.+||+..+.+..++...---.|++++|+|. ..+|.=.+.++.. .+++|++.-+....
T Consensus 137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~-------------------- 196 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRD-------------------- 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCC--------------------
Confidence 467887777877776653347999999996 8999999998887 68888776543221
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|...
T Consensus 197 -l~~~~k~ADIvV~AvGkp~~i~--~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 197 -LAAHTRRADIIVAAAGVAHLVT--ADMVKPGAAVLDVGVSR 235 (284)
T ss_pred -HHHHHHhCCEEEEecCCcCccC--HHHcCCCCEEEEccccc
Confidence 2233445899999999987433 45689999999998653
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.18 Score=43.45 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=50.4
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcE-EecCCCHHHHHHhcC---CccEEEEcCCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAMG---TMDGIIDTVSA 257 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~~~---g~d~vid~~g~ 257 (361)
.++||.|+ |.+|...+..+... .+|+++.++.++..++.+++. ... ..|-.+.+.+.++.. +.|++|.++|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57999997 99999988877777 999999998776555533332 221 134455555555443 69999999885
|
|
| >PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.27 Score=44.28 Aligned_cols=96 Identities=19% Similarity=0.222 Sum_probs=71.0
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~----g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
..+||+..+....|+...---.|++|+|+|. ..+|.=.+.++... +++|++.-+....
T Consensus 139 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~----------------- 201 (297)
T PRK14168 139 KFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKN----------------- 201 (297)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcC-----------------
Confidence 3568887777777776654458999999996 89999999999887 6888775433211
Q ss_pred CHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 202 ----l~~~~~~ADIvVsAvGkp~~i~--~~~ik~gavVIDvGin 239 (297)
T PRK14168 202 ----LARHCQRADILIVAAGVPNLVK--PEWIKPGATVIDVGVN 239 (297)
T ss_pred ----HHHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEecCCC
Confidence 2233445899999999887443 4568999999999864
|
|
| >PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.29 Score=43.95 Aligned_cols=96 Identities=16% Similarity=0.190 Sum_probs=71.0
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~----g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
...||+..+....|+...---.|++|+|+|. ..+|.=.+.++... +++|++.-+....
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~n----------------- 197 (293)
T PRK14185 135 CFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKN----------------- 197 (293)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCC-----------------
Confidence 3567887777777776653358999999996 89999999999877 6788765443221
Q ss_pred CHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 198 ----l~~~~~~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin 235 (293)
T PRK14185 198 ----LKKECLEADIIIAALGQPEFVK--ADMVKEGAVVIDVGTT 235 (293)
T ss_pred ----HHHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecCc
Confidence 2223345899999999988543 4679999999999864
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.24 Score=49.35 Aligned_cols=92 Identities=20% Similarity=0.201 Sum_probs=63.6
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec-CCCHHHHHHhc-CCccEEEEcCCCcccH-
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV-SRDQDEMQAAM-GTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~-~~~~~~~~~~~-~g~d~vid~~g~~~~~- 261 (361)
++++|.|.|.+|+..++.++..|.++++++.++++.+++ ++.|...+.- ..+++.+++.. +.+|.++-+.++...-
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~ 496 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG 496 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence 789999999999999999999999999999988877666 6777765543 33444444432 4789888777664311
Q ss_pred --HHHHHhhccCCEEEEe
Q 018094 262 --MPLIGLLKSQGKLVLV 277 (361)
Q Consensus 262 --~~~~~~l~~~G~~v~~ 277 (361)
-.+.+...+.-+++.-
T Consensus 497 ~iv~~~~~~~~~~~iiar 514 (558)
T PRK10669 497 EIVASAREKRPDIEIIAR 514 (558)
T ss_pred HHHHHHHHHCCCCeEEEE
Confidence 1233444555555544
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.16 Score=46.92 Aligned_cols=91 Identities=21% Similarity=0.235 Sum_probs=63.4
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-------CCc---EEecCCCHHHHHHhcCCccEEEEc
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-------GAD---SFLVSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-------g~~---~v~~~~~~~~~~~~~~g~d~vid~ 254 (361)
-+|.|+|+|.+|.+.+..+...|.+|++..++.++.+.+.+.. |.. .+....+ ..+....+|+||-+
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~---~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD---PEEALAGADFAVVA 81 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC---HHHHHcCCCEEEEE
Confidence 3689999999999999999888999999999877655553221 210 0111111 22333578999999
Q ss_pred CCCcccHHHHHHhhccCCEEEEecC
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
+.... +...++.++++-.++.+..
T Consensus 82 v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 82 VPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred CchHH-HHHHHHhcCcCCEEEEEee
Confidence 99876 7777788888777776643
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.25 Score=43.56 Aligned_cols=90 Identities=27% Similarity=0.350 Sum_probs=52.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHH----------------------HHHcCCc-EEecCC--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA----------------------IERLGAD-SFLVSR-- 236 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~----------------------~~~~g~~-~v~~~~-- 236 (361)
...+|+|+|+|++|..++..+...|. ++++++...-....+ ++++..+ .+....
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~ 110 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR 110 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence 34679999999999999999999998 677666542221111 1233321 111111
Q ss_pred -CHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCC
Q 018094 237 -DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQG 272 (361)
Q Consensus 237 -~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G 272 (361)
+++...+...++|+||||..+.......-+.....+
T Consensus 111 i~~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ 147 (245)
T PRK05690 111 LDDDELAALIAGHDLVLDCTDNVATRNQLNRACFAAK 147 (245)
T ss_pred CCHHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhC
Confidence 123344445689999999988763332333333334
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.089 Score=49.44 Aligned_cols=75 Identities=9% Similarity=0.104 Sum_probs=50.6
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
..+.+|||+|+ |-+|...+..+...|.+|+++++........ ..++...+ .|..+.+.+.+...++|+||.+++.
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~ 95 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE-DMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD 95 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc-ccccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence 46788999998 9999999999999999999998754321111 01122211 2444445555555689999999853
|
|
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.2 Score=49.46 Aligned_cols=88 Identities=23% Similarity=0.318 Sum_probs=62.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|++|.|+|.|.+|...++.++.+|.+|++.++.... +....+|...+ + +.++....|+|+-+.....
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~~----~---l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP--ERAAQLGVELV----S---LDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh--hHHHhcCCEEE----c---HHHHHhhCCEEEEccCCChHhh
Confidence 5889999999999999999999999999999875432 11235565432 1 2334456788888777542
Q ss_pred -cH-HHHHHhhccCCEEEEecC
Q 018094 260 -PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..|+++..+++++.
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 12 346777888888888874
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.23 Score=47.89 Aligned_cols=74 Identities=20% Similarity=0.202 Sum_probs=48.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS---EAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~---~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.+++++|+|.|.+|.+++.+++..|++|++.+....... +..++.|..........+. ...++|+|+.+.|-+.
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~---~~~~~d~vV~s~gi~~ 80 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLEL---LDEDFDLMVKNPGIPY 80 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHH---hcCcCCEEEECCCCCC
Confidence 367899999988999999999999999999886543222 2124456543322222221 1225899999877643
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.14 Score=44.81 Aligned_cols=73 Identities=14% Similarity=0.144 Sum_probs=50.3
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCc-EE--ecCCCHHHHHHh----cCCccEEE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-SF--LVSRDQDEMQAA----MGTMDGII 252 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~----~~g~d~vi 252 (361)
.+++|.|+ |.+|...++.+...|++|++++++.++...+.+++ +.. .+ .|..+.+.+.+. ...+|+++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv 81 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL 81 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence 47899997 99999999999999999999999887655544332 111 11 244444443332 23579999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
.++|.
T Consensus 82 ~~ag~ 86 (243)
T PRK07102 82 IAVGT 86 (243)
T ss_pred ECCcC
Confidence 88775
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.14 Score=44.99 Aligned_cols=73 Identities=21% Similarity=0.267 Sum_probs=50.7
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCccE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g~d~ 250 (361)
+++||.|+ |.+|...++.+...|++|+++.++.++..++.++ .+... ..|-.+++.+.++ .+++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899997 9999999999999999999999887655444333 23221 1244455444332 236899
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|.++|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999875
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK06932 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.11 Score=47.51 Aligned_cols=84 Identities=20% Similarity=0.265 Sum_probs=57.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.|++|.|+|-|.+|...+++++.+|++|+...+.... ..... + ..+.++....|+|+-+..-...
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~------~~~~~----~---~~l~ell~~sDiv~l~~Plt~~T~ 212 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGAS------VCREG----Y---TPFEEVLKQADIVTLHCPLTETTQ 212 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCccc------ccccc----c---CCHHHHHHhCCEEEEcCCCChHHh
Confidence 5789999999999999999999999999987654211 00100 1 1233444557888876653321
Q ss_pred ---HHHHHHhhccCCEEEEecC
Q 018094 261 ---LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ---~~~~~~~l~~~G~~v~~g~ 279 (361)
-...+..|+++..+++++.
T Consensus 213 ~li~~~~l~~mk~ga~lIN~aR 234 (314)
T PRK06932 213 NLINAETLALMKPTAFLINTGR 234 (314)
T ss_pred cccCHHHHHhCCCCeEEEECCC
Confidence 1346777888888888864
|
|
| >PTZ00079 NADP-specific glutamate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.74 Score=43.95 Aligned_cols=36 Identities=33% Similarity=0.371 Sum_probs=32.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
-.|.+|+|.|.|.+|+.+++.+..+|++|+.+.+.+
T Consensus 235 l~Gk~VaVqG~GnVg~~aa~~L~e~GakVVavSD~~ 270 (454)
T PTZ00079 235 LEGKTVVVSGSGNVAQYAVEKLLQLGAKVLTMSDSD 270 (454)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 478999999999999999999999999999776655
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.19 Score=42.62 Aligned_cols=95 Identities=19% Similarity=0.170 Sum_probs=56.2
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
..++.+||-+|+|. |..+..+++. |.+|++++.+++....+ .++.+...+ +...+.... ...+.+|+|+.+..
T Consensus 28 ~~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~ 104 (197)
T PRK11207 28 VVKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVV 104 (197)
T ss_pred cCCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecc
Confidence 45667899998754 6667777764 88999999987644332 222233211 111111111 12346999997643
Q ss_pred C--------cccHHHHHHhhccCCEEEEec
Q 018094 257 A--------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 257 ~--------~~~~~~~~~~l~~~G~~v~~g 278 (361)
- ...+....+.|+++|.++.+.
T Consensus 105 ~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 105 LMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred hhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 2 123556778899999965543
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.41 Score=44.37 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=58.3
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchh-HHHHHHHcCCcE---------------EecCCCHHHHHHhcCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSK-KSEAIERLGADS---------------FLVSRDQDEMQAAMGTM 248 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~-~~~~~~~~g~~~---------------v~~~~~~~~~~~~~~g~ 248 (361)
+|.|+|.|.+|+..++.+... +.+++.+...... ...+++++|.+. +....+ ..++..++
T Consensus 3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~---~~el~~~v 79 (341)
T PRK04207 3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGT---IEDLLEKA 79 (341)
T ss_pred EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCC---hhHhhccC
Confidence 588999999999988887754 6688888775432 333344444221 111111 22333579
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEecC
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
|+||||++.......+..+++.|-.++.-+.
T Consensus 80 DVVIdaT~~~~~~e~a~~~~~aGk~VI~~~~ 110 (341)
T PRK04207 80 DIVVDATPGGVGAKNKELYEKAGVKAIFQGG 110 (341)
T ss_pred CEEEECCCchhhHHHHHHHHHCCCEEEEcCC
Confidence 9999999988766667667777766666554
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.23 Score=41.23 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=27.3
Q ss_pred EEEEEccchHHHHHHHHHHHCCC-eEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~ 217 (361)
+|+|+|+|++|...++.+...|. ++++++...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 48999999999999999888898 688877664
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.3 Score=44.02 Aligned_cols=95 Identities=19% Similarity=0.198 Sum_probs=69.9
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~----g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
..||+..+.+..|+...---.|++|+|+|. ..+|.=.+.++... +++|++.-+....
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~------------------ 197 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDD------------------ 197 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCC------------------
Confidence 457777777777776553358999999996 89999999998876 7888774332211
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+.+..+|+++-++|.+..+. .+.++++..++++|..
T Consensus 198 ---l~~~~~~ADIvIsAvGkp~~i~--~~~ik~gaiVIDvGin 235 (297)
T PRK14167 198 ---LAAKTRRADIVVAAAGVPELID--GSMLSEGATVIDVGIN 235 (297)
T ss_pred ---HHHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence 2233445899999999987444 3678999999999964
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.16 Score=44.24 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=47.3
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHc---CCc--E-EecCCCHHHHHH-------hcCCcc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL---GAD--S-FLVSRDQDEMQA-------AMGTMD 249 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~~---g~~--~-v~~~~~~~~~~~-------~~~g~d 249 (361)
+++||+|+ |.+|...+..+...|++|+++.+ +.++..+...++ +.. . ..|..+.+.+.+ ..+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 46899997 99999999999999999998887 333333332222 211 1 124444433322 234689
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999875
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06046 alanine dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.3 Score=45.01 Aligned_cols=103 Identities=22% Similarity=0.317 Sum_probs=67.3
Q ss_pred CCCCEEEEEccchHHHHHHHHHH-HCCC-eEEEEeCCchhHHHHHHHc----CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~-~~g~-~Vi~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+...++.|+|+|..|...+..+. ..+. ++.+.+++.++..++++++ +.. +....+.+ ++.. .|+|+.|+
T Consensus 127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~-v~~~~~~~---~~l~-aDiVv~aT 201 (326)
T PRK06046 127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCD-VTVAEDIE---EACD-CDILVTTT 201 (326)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCCHH---HHhh-CCEEEEec
Confidence 45678899999999998888776 4566 6667777777777776665 322 11122322 2233 89999998
Q ss_pred CCcccHHHHHHhhccCCEEEEecCCCCC-cccChHH
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFS 290 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~ 290 (361)
.+..-+ -..+.++++-.+..+|..... .+++...
T Consensus 202 ps~~P~-~~~~~l~~g~hV~~iGs~~p~~~El~~~~ 236 (326)
T PRK06046 202 PSRKPV-VKAEWIKEGTHINAIGADAPGKQELDPEI 236 (326)
T ss_pred CCCCcE-ecHHHcCCCCEEEecCCCCCccccCCHHH
Confidence 875422 234467898899999976543 4555443
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.77 E-value=0.23 Score=43.75 Aligned_cols=75 Identities=21% Similarity=0.241 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~ 250 (361)
.+.++||.|+ |.+|.+.++.+...|++|+.+.+.... ..+.+++.+... -.|-.+.+.+.++ .+++|+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4688999997 999999999999999999887654321 111223334321 1243444333322 247999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|.++|.
T Consensus 89 li~~Ag~ 95 (253)
T PRK08993 89 LVNNAGL 95 (253)
T ss_pred EEECCCC
Confidence 9999885
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.47 Score=40.03 Aligned_cols=60 Identities=18% Similarity=0.297 Sum_probs=41.3
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHh---cCCccEEEEcCCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~g~d~vid~~g~ 257 (361)
++||.|+ |.+|...+..+... .+|++++++... ...|-.+.+.++++ .+++|+++.++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKVGKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence 5899997 99999888877766 899998876431 12344444443332 2478999988875
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.17 Score=47.45 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=51.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----------CCcEE-ecCCCHHHHHHhcCCc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----------GADSF-LVSRDQDEMQAAMGTM 248 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----------g~~~v-~~~~~~~~~~~~~~g~ 248 (361)
..+++|||.|+ |.+|...+..+...|.+|+++.++.++...+ +++ +...+ .|..+.+.+.++..++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~ 129 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGC 129 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhc
Confidence 56789999997 9999999999999999999888776544333 222 12211 2445555566655678
Q ss_pred cEEEEcCC
Q 018094 249 DGIIDTVS 256 (361)
Q Consensus 249 d~vid~~g 256 (361)
|.||.+.+
T Consensus 130 d~V~hlA~ 137 (367)
T PLN02686 130 AGVFHTSA 137 (367)
T ss_pred cEEEecCe
Confidence 88886543
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.42 Score=36.43 Aligned_cols=90 Identities=19% Similarity=0.282 Sum_probs=59.2
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcccHHH-
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHPLMP- 263 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~- 263 (361)
|+|.|.|.+|...++.++..+.+|++++.++++..++ ++.|...+. |..+.+.+.++. ..++.++-+.+....-..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEEL-REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-HhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 5788999999999999999777999999998887666 556654333 233445555543 478999988877642222
Q ss_pred --HHHhhccCCEEEEe
Q 018094 264 --LIGLLKSQGKLVLV 277 (361)
Q Consensus 264 --~~~~l~~~G~~v~~ 277 (361)
.++.+.+..+++..
T Consensus 80 ~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 80 ALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHTTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 22333455566554
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.2 Score=45.60 Aligned_cols=75 Identities=24% Similarity=0.363 Sum_probs=56.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHH--HHHHcCC-c---EEe--cCCCHHHHHHhcCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE--AIERLGA-D---SFL--VSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~--~~~~~g~-~---~v~--~~~~~~~~~~~~~g~d~vid 253 (361)
.+.+|+|.|| |-+|.+.+..+...|.+|..++|+++.... .+++|.. . .++ |-.+.+...+.-.|.|.||-
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 5678999998 999999999999999999999999886332 3466652 1 111 23345566666778999998
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++..
T Consensus 85 ~Asp 88 (327)
T KOG1502|consen 85 TASP 88 (327)
T ss_pred eCcc
Confidence 7655
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.29 Score=43.23 Aligned_cols=74 Identities=18% Similarity=0.241 Sum_probs=48.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH---HHcCCcE-E--ecCCCHHHHHH-------hcCCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAI---ERLGADS-F--LVSRDQDEMQA-------AMGTM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~---~~~g~~~-v--~~~~~~~~~~~-------~~~g~ 248 (361)
++++||.|+ |.+|...++.+...|++|+++.+.+. +..++. ++.+... . .|-.+.+.+.. ..+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999998 99999999999999999988865443 222222 2345322 1 34444433322 22468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999875
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.25 Score=43.58 Aligned_cols=75 Identities=19% Similarity=0.201 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.+.++||.|+ |.+|...+..+...|++|+++.+.+ ++...+.++ .+... ..|..+.+.+.++ .++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999998888999998877643 333333222 23321 1244444433322 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 8999999875
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.49 Score=42.48 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=52.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CC---cEEecCCCHH----HHHHhcC--C
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GA---DSFLVSRDQD----EMQAAMG--T 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~---~~v~~~~~~~----~~~~~~~--g 247 (361)
+.|++.+|.|+ .++|.+-+.=+...|.+|+++.|+.+|+....++. ++ ..++|..+.+ .+++... .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 45799999998 78996655444448999999999999987666554 33 2345654443 2333333 4
Q ss_pred ccEEEEcCCCcc
Q 018094 248 MDGIIDTVSAVH 259 (361)
Q Consensus 248 ~d~vid~~g~~~ 259 (361)
+-+.++++|...
T Consensus 127 VgILVNNvG~~~ 138 (312)
T KOG1014|consen 127 VGILVNNVGMSY 138 (312)
T ss_pred eEEEEecccccC
Confidence 667888888653
|
|
| >PRK06487 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.17 Score=46.43 Aligned_cols=83 Identities=18% Similarity=0.287 Sum_probs=54.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.|++|.|+|.|.+|...+++++.+|.+|++..+..... ... .. .+.++....|+|..+..-...
T Consensus 147 ~gktvgIiG~G~IG~~vA~~l~~fgm~V~~~~~~~~~~-------~~~----~~---~l~ell~~sDiv~l~lPlt~~T~ 212 (317)
T PRK06487 147 EGKTLGLLGHGELGGAVARLAEAFGMRVLIGQLPGRPA-------RPD----RL---PLDELLPQVDALTLHCPLTEHTR 212 (317)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCCcc-------ccc----cc---CHHHHHHhCCEEEECCCCChHHh
Confidence 57899999999999999999999999999887652110 011 01 123333456777765553221
Q ss_pred ---HHHHHHhhccCCEEEEecC
Q 018094 261 ---LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ---~~~~~~~l~~~G~~v~~g~ 279 (361)
-...++.|+++..+|++|.
T Consensus 213 ~li~~~~~~~mk~ga~lIN~aR 234 (317)
T PRK06487 213 HLIGARELALMKPGALLINTAR 234 (317)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1346666777777777764
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.26 Score=43.65 Aligned_cols=74 Identities=19% Similarity=0.328 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.+.++||.|+ |.+|...++.+...|++|+++.++.+. .+..++ .+... ..|..+.+.+.++ .+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 999999999999999999999887642 222222 23221 2344444433322 2468
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999999884
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.24 Score=45.98 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=52.2
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHHcC---Cc-EE--ecCCCHHHHHHhcCCccEEEE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS-EAIERLG---AD-SF--LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~-~~~~~~g---~~-~v--~~~~~~~~~~~~~~g~d~vid 253 (361)
.++.+|||.|+ |.+|...+..+...|.+|++++++.++.. ...+.+. .. .+ .|..+.+.+.++..++|+||.
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 35678999998 99999999999999999999988765321 1112221 11 11 234455556666668999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
+++.
T Consensus 88 ~A~~ 91 (342)
T PLN02214 88 TASP 91 (342)
T ss_pred ecCC
Confidence 9875
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.31 Score=43.64 Aligned_cols=88 Identities=16% Similarity=0.265 Sum_probs=57.5
Q ss_pred CEEEEEccchHHHHHHHHHHH--CCCeEEEEe-CCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKA--MGVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~--~g~~Vi~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-+|-|+|.|.+|...++.+.. .+.++..+. ++.++..++++++|....+ .+.+ ++....|+|++|++.....
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~--~~~e---ell~~~D~Vvi~tp~~~h~ 81 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV--VPLD---QLATHADIVVEAAPASVLR 81 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc--CCHH---HHhcCCCEEEECCCcHHHH
Confidence 468899999999988877765 367777554 4445555666666642222 2222 2334689999999987545
Q ss_pred HHHHHhhccCCEEEEe
Q 018094 262 MPLIGLLKSQGKLVLV 277 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~ 277 (361)
.....+++.+..++..
T Consensus 82 e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 82 AIVEPVLAAGKKAIVL 97 (271)
T ss_pred HHHHHHHHcCCcEEEe
Confidence 5566777776656543
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.2 Score=43.97 Aligned_cols=75 Identities=21% Similarity=0.284 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCC-cc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGT-MD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g-~d 249 (361)
.+.++||.|+ |.+|...+..+...|++|+++.+. .++...+..+++... ..|..+.+.+.++ .++ +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 3568999997 999999999999999999887654 333444444454321 1244444333221 233 89
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 84 ~li~~ag~ 91 (253)
T PRK08642 84 TVVNNALA 91 (253)
T ss_pred EEEECCCc
Confidence 99998864
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.66 Score=41.74 Aligned_cols=101 Identities=15% Similarity=0.179 Sum_probs=67.6
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CC---cEEecCCCHHHHHHhc---------CC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GA---DSFLVSRDQDEMQAAM---------GT 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-g~---~~v~~~~~~~~~~~~~---------~g 247 (361)
.+++.|||.|+ ++.|...+.-+...|.+|++.+-.++..+.+..+. .. +-.+|-.+++.+++.. .+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 35667999998 99999999999999999999998777655554433 11 2235555555544432 26
Q ss_pred ccEEEEcCCCcc--------------------------cHHHHHHhh-ccCCEEEEecCCCC
Q 018094 248 MDGIIDTVSAVH--------------------------PLMPLIGLL-KSQGKLVLVGAPEK 282 (361)
Q Consensus 248 ~d~vid~~g~~~--------------------------~~~~~~~~l-~~~G~~v~~g~~~~ 282 (361)
.=-+++++|... .....+..+ +..||+|.+++..+
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 777888888321 112233344 55699999987654
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.2 Score=45.02 Aligned_cols=90 Identities=19% Similarity=0.286 Sum_probs=60.7
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhc------CC-ccEEEEcCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAM------GT-MDGIIDTVS 256 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~------~g-~d~vid~~g 256 (361)
+|||+|+ |.+|...++.+...|.+|.+++++.++.. ..+... ..|..+.+.+.+.. .+ +|.+|-+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4889998 99999999999989999999999876431 223322 24666666665544 46 899998776
Q ss_pred Ccc----cHHHHHHhhccCC--EEEEecC
Q 018094 257 AVH----PLMPLIGLLKSQG--KLVLVGA 279 (361)
Q Consensus 257 ~~~----~~~~~~~~l~~~G--~~v~~g~ 279 (361)
... .....++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 421 1334445554444 6777754
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.14 Score=44.44 Aligned_cols=72 Identities=19% Similarity=0.261 Sum_probs=53.3
Q ss_pred EEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcC--CccEEEEcCCCc
Q 018094 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMG--TMDGIIDTVSAV 258 (361)
Q Consensus 187 VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~--g~d~vid~~g~~ 258 (361)
|||+|+ |-+|...+..+...|.+|+.+.+..........+..... ..|..+.+.+.++.. .+|.||.+++..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 789998 999999999999999999988888776544433333322 235556666666554 579999999874
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 361 | ||||
| 1yqd_A | 366 | Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ | 1e-160 | ||
| 2cf5_A | 357 | Crystal Structures Of The Arabidopsis Cinnamyl Alco | 3e-84 | ||
| 1uuf_A | 369 | Crystal Structure Of A Zinc-Type Alcohol Dehydrogen | 1e-79 | ||
| 3two_A | 348 | The Crystal Structure Of Cad From Helicobacter Pylo | 2e-68 | ||
| 1ps0_A | 360 | Crystal Structure Of The Nadp(H)-Dependent Cinnamyl | 1e-50 | ||
| 3s1l_A | 340 | Crystal Structure Of Apo-Form Furx Length = 340 | 6e-41 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 3e-40 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 3e-40 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 7e-37 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 2e-33 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 5e-32 | ||
| 4eex_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 4e-27 | ||
| 4eez_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 8e-27 | ||
| 1h2b_A | 359 | Crystal Structure Of The Alcohol Dehydrogenase From | 7e-22 | ||
| 2h6e_A | 344 | Crystal Structure Of The D-Arabinose Dehydrogenase | 3e-17 | ||
| 1r37_A | 347 | Alcohol Dehydrogenase From Sulfolobus Solfataricus | 5e-15 | ||
| 2eer_A | 347 | Structural Study Of Project Id St2577 From Sulfolob | 5e-15 | ||
| 3i4c_A | 347 | Crystal Structure Of Sulfolobus Solfataricus Adh(Ss | 6e-15 | ||
| 1nto_A | 347 | N249y Mutant Of Alcohol Dehydrogenase From The Arch | 1e-14 | ||
| 1jvb_A | 347 | Alcohol Dehydrogenase From The Archaeon Sulfolobus | 7e-14 | ||
| 3uko_A | 378 | Crystal Structure Of S-Nitrosoglutathione Reductase | 5e-13 | ||
| 2xaa_A | 345 | Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube | 7e-12 | ||
| 4dl9_A | 396 | Crystal Structure Of S-nitrosoglutathione Reductase | 8e-12 | ||
| 1ht0_A | 374 | Human Gamma-2 Alcohol Dehydrogense Length = 374 | 2e-11 | ||
| 1hdy_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 3e-11 | ||
| 1agn_A | 373 | X-Ray Structure Of Human Sigma Alcohol Dehydrogenas | 3e-11 | ||
| 1d1t_A | 373 | Mutant Of Human Sigma Alcohol Dehydrogenase With Le | 3e-11 | ||
| 1hso_A | 374 | Human Alpha Alcohol Dehydrogenase (Adh1a) Length = | 1e-10 | ||
| 1hdx_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 2e-10 | ||
| 1htb_A | 374 | Crystallization Of Human Beta3 Alcohol Dehydrogenas | 2e-10 | ||
| 1hdz_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 3e-10 | ||
| 1cdo_A | 374 | Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co | 7e-10 | ||
| 4ej6_A | 370 | Crystal Structure Of A Putative Zinc-Binding Dehydr | 8e-10 | ||
| 1f8f_A | 371 | Crystal Structure Of Benzyl Alcohol Dehydrogenase F | 1e-09 | ||
| 4ilk_A | 359 | Crystal Structure Of Short Chain Alcohol Dehydrogen | 2e-09 | ||
| 1vj0_A | 380 | Crystal Structure Of Alcohol Dehydrogenase (Tm0436) | 2e-09 | ||
| 1p0c_A | 373 | Crystal Structure Of The Nadp(H)-Dependent Vertebra | 2e-09 | ||
| 1e3l_A | 376 | P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase | 4e-09 | ||
| 1ee2_B | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 5e-09 | ||
| 1ee2_A | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 5e-09 | ||
| 1e3j_A | 352 | Ketose Reductase (Sorbitol Dehydrogenase) From Silv | 1e-08 | ||
| 1axg_A | 374 | Crystal Structure Of The Val203->ala Mutant Of Live | 3e-08 | ||
| 1a71_A | 374 | Ternary Complex Of An Active Site Double Mutant Of | 3e-08 | ||
| 6adh_A | 374 | Structure Of Triclinic Ternary Complex Of Horse Liv | 4e-08 | ||
| 1axe_A | 374 | Crystal Structure Of The Active-Site Mutant Phe93-> | 5e-08 | ||
| 3oq6_A | 374 | Horse Liver Alcohol Dehydrogenase A317c Mutant Comp | 6e-08 | ||
| 1mgo_A | 374 | Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L | 6e-08 | ||
| 1e3e_A | 376 | Mouse Class Ii Alcohol Dehydrogenase Complex With N | 6e-08 | ||
| 1n8k_A | 374 | Horse Liver Alcohol Dehydrogenase Val292thr Mutant | 1e-07 | ||
| 1ju9_A | 374 | Horse Liver Alcohol Dehydrogenase Val292ser Mutant | 2e-07 | ||
| 1mc5_A | 374 | Ternary Complex Of Human Glutathione-Dependent Form | 2e-07 | ||
| 1teh_A | 373 | Structure Of Human Liver Chichi Alcohol Dehydrogena | 2e-07 | ||
| 3qj5_A | 374 | S-Nitrosoglutathione Reductase (Gsnor) In Complex W | 2e-07 | ||
| 3cos_A | 381 | Crystal Structure Of Human Class Ii Alcohol Dehydro | 2e-07 | ||
| 1qv6_A | 374 | Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG | 3e-07 | ||
| 1qlh_A | 374 | Horse Liver Alcohol Dehydrogenase Complexed To Nad | 5e-07 | ||
| 3gfb_A | 350 | L-Threonine Dehydrogenase (Tktdh) From The Hyperthe | 5e-07 | ||
| 2dfv_A | 347 | Hyperthermophilic Threonine Dehydrogenase From Pyro | 6e-07 | ||
| 2d8a_A | 348 | Crystal Structure Of Ph0655 From Pyrococcus Horikos | 6e-07 | ||
| 2dq4_A | 343 | Crystal Structure Of Threonine 3-Dehydrogenase Leng | 1e-06 | ||
| 4a2c_A | 346 | Crystal Structure Of Galactitol-1-Phosphate Dehydro | 1e-06 | ||
| 2fzw_A | 373 | Structure Of The Binary Complex Of The E67l Mutant | 2e-06 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 2e-06 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 6e-06 | ||
| 1kol_A | 398 | Crystal Structure Of Formaldehyde Dehydrogenase Len | 9e-06 | ||
| 3fpl_A | 351 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 1e-05 | ||
| 1pl7_A | 356 | Human Sorbitol Dehydrogenase (Apo) Length = 356 | 1e-05 | ||
| 1ped_A | 351 | Bacterial Secondary Alcohol Dehydrogenase (Apo-Form | 2e-05 | ||
| 1jqb_A | 351 | Alcohol Dehydrogenase From Clostridium Beijerinckii | 2e-05 | ||
| 3ip1_A | 404 | Structure Of Putative Alcohol Dehydrogenase (Tm_042 | 2e-05 | ||
| 3qe3_A | 355 | Sheep Liver Sorbitol Dehydrogenase Length = 355 | 2e-05 | ||
| 2b83_A | 351 | A Single Amino Acid Substitution In The Clostridium | 3e-05 | ||
| 2dph_A | 398 | Crystal Structure Of Formaldehyde Dismutase Length | 5e-05 | ||
| 3m6i_A | 363 | L-Arabinitol 4-Dehydrogenase Length = 363 | 6e-05 | ||
| 1yb5_A | 351 | Crystal Structure Of Human Zeta-crystallin With Bou | 4e-04 | ||
| 1pl6_A | 356 | Human SdhNADHINHIBITOR COMPLEX Length = 356 | 4e-04 |
| >pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366 | Back alignment and structure |
|
| >pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357 | Back alignment and structure |
|
| >pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369 | Back alignment and structure |
|
| >pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348 | Back alignment and structure |
|
| >pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360 | Back alignment and structure |
|
| >pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348 | Back alignment and structure |
|
| >pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348 | Back alignment and structure |
|
| >pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359 | Back alignment and structure |
|
| >pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344 | Back alignment and structure |
|
| >pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347 | Back alignment and structure |
|
| >pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347 | Back alignment and structure |
|
| >pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347 | Back alignment and structure |
|
| >pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347 | Back alignment and structure |
|
| >pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347 | Back alignment and structure |
|
| >pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378 | Back alignment and structure |
|
| >pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345 | Back alignment and structure |
|
| >pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396 | Back alignment and structure |
|
| >pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374 | Back alignment and structure |
|
| >pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373 | Back alignment and structure |
|
| >pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373 | Back alignment and structure |
|
| >pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374 | Back alignment and structure |
|
| >pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374 | Back alignment and structure |
|
| >pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374 | Back alignment and structure |
|
| >pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370 | Back alignment and structure |
|
| >pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371 | Back alignment and structure |
|
| >pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359 | Back alignment and structure |
|
| >pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380 | Back alignment and structure |
|
| >pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373 | Back alignment and structure |
|
| >pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352 | Back alignment and structure |
|
| >pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374 | Back alignment and structure |
|
| >pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374 | Back alignment and structure |
|
| >pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373 | Back alignment and structure |
|
| >pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374 | Back alignment and structure |
|
| >pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381 | Back alignment and structure |
|
| >pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374 | Back alignment and structure |
|
| >pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350 | Back alignment and structure |
|
| >pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347 | Back alignment and structure |
|
| >pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348 | Back alignment and structure |
|
| >pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346 | Back alignment and structure |
|
| >pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398 | Back alignment and structure |
|
| >pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351 | Back alignment and structure |
|
| >pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356 | Back alignment and structure |
|
| >pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351 | Back alignment and structure |
|
| >pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351 | Back alignment and structure |
|
| >pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404 | Back alignment and structure |
|
| >pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355 | Back alignment and structure |
|
| >pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351 | Back alignment and structure |
|
| >pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398 | Back alignment and structure |
|
| >pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363 | Back alignment and structure |
|
| >pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351 | Back alignment and structure |
|
| >pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 670 bits (1731), Expect = 0.0
Identities = 278/361 (77%), Positives = 319/361 (88%)
Query: 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE 60
M ++PE+EHP AFGWAARD SG LSPF+FSRRATGE+DV FKV +CG+CHSDLH IKN+
Sbjct: 5 MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64
Query: 61 WGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKV 120
WG ++YP+VPGHEIVG VTEVGSKV K VGDKVGVGC+VG+C SC+SCA DLENYCPK+
Sbjct: 65 WGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKM 124
Query: 121 IMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
I+TYA+ YHDGTITYGGYS+ MVA+E +++R P+ PLD APLLCAGITVYSPL+++GL
Sbjct: 125 ILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGL 184
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
D+PG H+G+VGLGGLGHVAVKFAKA G KVTVISTSPSKK EA++ GADSFLVSRDQ++
Sbjct: 185 DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ 244
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300
MQAA GT+DGIIDTVSAVHPL+PL GLLKS GKL+LVGAPEKPLELPAFSL+ GRKIV G
Sbjct: 245 MQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAG 304
Query: 301 SMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKST 360
S IGGMKETQEMIDFAAKHNI ADIEVI DY+NTA+ERLAK DVRYRFVIDV NT+ +T
Sbjct: 305 SGIGGMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNTLAAT 364
Query: 361 P 361
Sbjct: 365 K 365
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 649 bits (1676), Expect = 0.0
Identities = 183/352 (51%), Positives = 242/352 (68%)
Query: 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP 67
E + GWAARD SG+LSP+ ++ R TG +DV ++ CGICH+DLH KN+ G + YP
Sbjct: 5 EAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYP 64
Query: 68 IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
+VPGHE+VG V EVGS VSKF VGD VGVGC+VG C C C DLE YCPK I +Y +
Sbjct: 65 MVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDV 124
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
Y +G T GG++ V + FVV+IPEG ++ APLLCAG+TVYSPL +GL +PG+
Sbjct: 125 YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRG 184
Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
G++GLGG+GH+ VK AKAMG VTVIS+S K+ EA++ LGAD +++ DQ +M +
Sbjct: 185 GILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADS 244
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307
+D +IDTV H L P + LLK GKL+L+G PL+ L++GRK++ GS IG MK
Sbjct: 245 LDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMK 304
Query: 308 ETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMKS 359
ET+EM++F + + + IEV+ DYVNTA ERL K DVRYRFV+DV +
Sbjct: 305 ETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 624 bits (1612), Expect = 0.0
Identities = 169/359 (47%), Positives = 221/359 (61%), Gaps = 6/359 (1%)
Query: 3 QAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG 62
+ ++ A L P +RR G DV ++ +CG+CHSDLH +++EW
Sbjct: 13 TSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA 72
Query: 63 NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIM 122
+YP VPGHEIVG V VG +V K+ GD VGVGC+V SC+ C+ C LENYC +
Sbjct: 73 GTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG 132
Query: 123 TYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCAGITVYSPLRFYGL 180
TY + D T GGYS +V E +V+RI L A APLLCAGIT YSPLR +
Sbjct: 133 TYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA 192
Query: 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240
PG VGVVG+GGLGH+ +K A AMG V +TS +K+ A + LGAD + SR+ DE
Sbjct: 193 -GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADE 250
Query: 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP-AFSLLMGRKIVG 299
M A + + D I++TV+A H L LLK G + LVGAP P + P F+L+M R+ +
Sbjct: 251 MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIA 310
Query: 300 GSMIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTMK 358
GSMIGG+ ETQEM+DF A+H I ADIE+I AD +N A ER+ + DV+YRFVID T+
Sbjct: 311 GSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDNR-TLT 368
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 610 bits (1575), Expect = 0.0
Identities = 126/353 (35%), Positives = 190/353 (53%), Gaps = 10/353 (2%)
Query: 8 EHPKNAFGWAARDTSGV--LSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI 65
+P+ G A + + + + D+ K+ CG+C SD+H WGN
Sbjct: 2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMK 61
Query: 66 YPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY 124
P+V GHEIVG V ++G K S KVG +VGVG V SC CD C D E YC K + TY
Sbjct: 62 MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY 121
Query: 125 ANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG 184
+ Y DG ++ GGY++ + EHFVV IPE P APLLC G+TVYSPL G PG
Sbjct: 122 SQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC-GPG 180
Query: 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQA 243
VG+VGLGG+G + +KAMG + VIS S K+ +A+ ++GAD ++ + ++ D +
Sbjct: 181 KKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEGDWGEK 239
Query: 244 AMGTMDGIIDTVSAVHPL--MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGS 301
T D I+ S++ + + +K G++V + PE+ L + + S
Sbjct: 240 YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYS 299
Query: 302 MIGGMKETQEMIDFAAKHNIRADIEVIPADY--VNTALERLAKADVRYRFVID 352
+G +KE +++ ++ +I+ +E +P V+ A ER+ K DVRYRF +
Sbjct: 300 ALGSIKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLV 352
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 603 bits (1558), Expect = 0.0
Identities = 146/353 (41%), Positives = 205/353 (58%), Gaps = 12/353 (3%)
Query: 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIV 69
+ G+A P FSR A G +DV + + GICHSD+H +EW IYP++
Sbjct: 2 RVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMI 61
Query: 70 PGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY--ANK 127
PGHEI G++ EVG V KFK+GD VGVGC V SC++C C E +C KV+ TY +
Sbjct: 62 PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDS 121
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
+HD GGYS+ +V DE++V+ + + PL+ APLLCAGIT YSPL+F + G V
Sbjct: 122 FHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKV-TKGTKV 180
Query: 188 GVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247
GV G GGLG +AVK+A AMG +V+V + + KK +A+ +G F Q
Sbjct: 181 GVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKHFYTDPKQ-----CKEE 234
Query: 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE--LPAFSLL-MGRKIVGGSMIG 304
+D II T+ + L + LL G L LVG P + L F + +G + V GS+IG
Sbjct: 235 LDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIG 294
Query: 305 GMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVANTM 357
G+KETQEM+DF+ KHNI +I++I ++TA L ++R+VID+ +
Sbjct: 295 GIKETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 475 bits (1225), Expect = e-169
Identities = 107/345 (31%), Positives = 168/345 (48%), Gaps = 13/345 (3%)
Query: 15 GWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHE 73
L + +V ++ CG+CH+DLH +W P++PGHE
Sbjct: 3 AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62
Query: 74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI 133
VG+V EVG V+ KVGD+VG+ + +C CD C E C G
Sbjct: 63 GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYS 115
Query: 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
GGY++ A +VV+IP+ + AP+ CAG+T Y L+ G KPG V + G+G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIG 174
Query: 194 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTMDG 250
GLGHVAV++AKAMG+ V + K A + LGAD + +D M+ +G +
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKVGGVHA 233
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQ 310
+ T + ++ G VLVG P + + +P F ++ + GS++G K+ Q
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQ 293
Query: 311 EMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVAN 355
E + FAA+ ++ IEV P + +N +R+ K + R V+ + +
Sbjct: 294 EALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVLTLED 338
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 472 bits (1218), Expect = e-168
Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 17/353 (4%)
Query: 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPI 68
P+ G ++ G L ++ V + G+CH+DLH +W + P+
Sbjct: 3 PETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPL 62
Query: 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
V GHE GVV +G V +K+GD G+ + GSC +C+ C + E+ CP ++
Sbjct: 63 VGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS----- 117
Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
G G + AD IP+GT L AP+LCAGITVY L+ L G V
Sbjct: 118 --GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANL-MAGHWVA 174
Query: 189 VVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-----MQ 242
+ G GGLG +AV++AKAMG +V I K+ +G + F+ + + ++
Sbjct: 175 ISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGEVFIDFTKEKDIVGAVLK 233
Query: 243 AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGS 301
A G G+I+ + + +++ G VLVG P F+ ++ + GS
Sbjct: 234 ATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGS 293
Query: 302 MIGGMKETQEMIDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354
+G +T+E +DF A+ +++ I+V+ + E++ K + R+V+D +
Sbjct: 294 YVGNRADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTS 346
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 468 bits (1206), Expect = e-167
Identities = 114/342 (33%), Positives = 173/342 (50%), Gaps = 13/342 (3%)
Query: 17 AARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIV 75
R L+ G V K+ G+CH+DLH +W P +PGHE V
Sbjct: 7 VVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGV 66
Query: 76 GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY 135
G V+ VGS VS+ K GD+VGV + +C C+ C E C K T G
Sbjct: 67 GYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVN 119
Query: 136 GGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGL 195
GGY + +VAD ++V +P+ AP+LCAG+TVY L+ +PG V + G+GGL
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLKVTDT-RPGQWVVISGIGGL 178
Query: 196 GHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGTMDGII 252
GHVAV++A+AMG++V + +K + A RLGA+ + +RD D +Q +G G++
Sbjct: 179 GHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237
Query: 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
T + IG+++ G + L G P P F +++ + GS++G + QE
Sbjct: 238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQES 297
Query: 313 IDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354
+DFAA +++A + D VN RL + V R V+D +
Sbjct: 298 LDFAAHGDVKATVSTAKLDDVNDVFGRLREGKVEGRVVLDFS 339
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 2e-84
Identities = 86/325 (26%), Positives = 133/325 (40%), Gaps = 18/325 (5%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNA--IYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
++V ++ G+C +DL + K PI+ GHE G + EVG ++K K GD
Sbjct: 27 QGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDN 85
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
V V +C C N C I+ G T GG+S+ M+ +
Sbjct: 86 VVVY-ATWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL 137
Query: 154 EGTPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV 210
APL AG T +R + V V G+GGL ++ KA+ +
Sbjct: 138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNI 197
Query: 211 TVISTSPSK-KSEAIERLGADSFLVSRDQDE--MQAAMGTM-DGIIDTVSAVHPLMPLIG 266
T++ S SK + LGAD +D + + G ID V L
Sbjct: 198 TIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGK 257
Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE 326
LL +G ++LVG K + L AF + K + GS G + + ++++ + I+ I
Sbjct: 258 LLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKIKPYII 317
Query: 327 VIPADYVNTALERLAKADVRYRFVI 351
+P D +N A L + V R VI
Sbjct: 318 KVPLDDINKAFTNLDEGRVDGRQVI 342
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 258 bits (662), Expect = 4e-84
Identities = 91/331 (27%), Positives = 151/331 (45%), Gaps = 22/331 (6%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIY---PIVPGHEIVGVVTEVGSKVSKFK 89
R G DV ++ G+CH+DLHL++ W + P GHE VG + EV V +
Sbjct: 37 RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
GD V + + +C +C + +C + G GG+++ M V
Sbjct: 97 KGDPVIL-HPAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSV 148
Query: 150 VRIPEGTPLDAT---APLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKA 205
+++P+ + APL AGIT Y ++ PG +V +VG+GGLGH+AV+ K
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208
Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTM--DGIIDTVSAVHP 260
M V + K + ERLGAD + +R ++ + +D V +
Sbjct: 209 MTPATVIALDVKEEKL-KLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQAT 267
Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320
+ LL G+L++VG + L P ++ GS++G E E++ A +
Sbjct: 268 VDYTPYLLGRMGRLIIVGYGGE-LRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 326
Query: 321 IRADIEVIPADYVNTALERLAKADVRYRFVI 351
+R ++++ D +N LERL K +V R V+
Sbjct: 327 VRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 250 bits (641), Expect = 3e-81
Identities = 89/332 (26%), Positives = 138/332 (41%), Gaps = 26/332 (7%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI--------YPIVPGHEIVGVVTEVGSKVSK 87
V KV G+CHSD+H+ + +GN P+ GHEI G + EVG +V
Sbjct: 24 KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
+ GD V V G +C C I E+ C G G Y++ ++ +
Sbjct: 84 YSKGDLVAVNPWQG-EGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAM 206
+ APL C+GIT Y +R L P + VVG GGLG +AV+ AKA+
Sbjct: 136 KYMYKLRRLNAVEAAPLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAV 194
Query: 207 -GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHP 260
G + + EA +R GAD + + QD + +D +ID ++
Sbjct: 195 SGATIIGVDVREEAV-EAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKT 253
Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320
L L QGK V+VG L A + + GS++G + ++ A
Sbjct: 254 LSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 313
Query: 321 IRADI-EVIPADYVNTALERLAKADVRYRFVI 351
++ I + + + N A++ L R V+
Sbjct: 314 VKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 244 bits (624), Expect = 1e-78
Identities = 83/324 (25%), Positives = 130/324 (40%), Gaps = 12/324 (3%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWG--NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
G ++ KVT G+CHSD+ ++ P+ GHE VG V E+G V+ F VGD
Sbjct: 24 GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153
V V C +C +CA ENYC + G + G ++ M+ D +
Sbjct: 84 VAV-YGPWGCGACHACARGRENYCTRAAD--LGITPPGLGSPGSMAEYMIVDSARHLVPI 140
Query: 154 EGTPLDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVT 211
A APL AG+T Y + PG V+G+GGLGHV ++ +A+ +V
Sbjct: 141 GDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVI 200
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQ--DEMQAAMGTM--DGIIDTVSAVHPLMPLIGL 267
+ + +GAD+ + S D ++ G + D V A + +
Sbjct: 201 AVDLDDDRL-ALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQV 259
Query: 268 LKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIEV 327
+ G + +VG F ++ V G E E++ A + E
Sbjct: 260 VAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHTET 319
Query: 328 IPADYVNTALERLAKADVRYRFVI 351
D A RL + +R R V+
Sbjct: 320 FTLDEGPAAYRRLREGSIRGRGVV 343
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 1e-48
Identities = 81/332 (24%), Positives = 131/332 (39%), Gaps = 29/332 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS-----KFKV 90
+ ++ G+C SD+H+ + E PI+ GHE G V EV + K
Sbjct: 41 PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 100
Query: 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY----GGYSD-IMVAD 145
GD + V +C C C + E Y Y + G Y G YS I++
Sbjct: 101 GDLI-VWNRGITCGECYWCKVSKEPYLCPNRKVYG--INRGCSEYPHLRGCYSSHIVLDP 157
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
E V+++ E LD A +C+G T Y Y G V + G G LG V A++
Sbjct: 158 ETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARS 217
Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQD--EMQAAMGTM------DGIIDTVS 256
+G V VI+ SP++ A E +GAD L R+ E + A+ + D I++
Sbjct: 218 LGAENVIVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATG 276
Query: 257 AVHPLMPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGR-KIVGGSMIGGMKETQEMI 313
L+ LL+ G + G P+ P+ + L+ + G + + +
Sbjct: 277 DSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTV 336
Query: 314 DFAAKHNIRAD---IEVIPADYVNTALERLAK 342
+++ +P N ALE +
Sbjct: 337 SITSRNYQLLSKLITHRLPLKEANKALELMES 368
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-43
Identities = 78/323 (24%), Positives = 124/323 (38%), Gaps = 32/323 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G D+ KV CGIC +D HL+ E+ + P+ GHE G+V E GS V G ++
Sbjct: 46 GPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRDIAPGARI- 103
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
G SC C C N C + G GG+++ ++ IP
Sbjct: 104 TGDPNISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLT 156
Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVT 211
A PL C ++ K G V ++G G +G + V+ A+ G V
Sbjct: 157 LDPVHGAFCEPLACC---LHGVDL--SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVI 211
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-------IIDTVSAVHPLMPL 264
+ + +K+ A E +GA + + D ++A G + +I+ +
Sbjct: 212 LSTRQATKRRLA-EEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQS 270
Query: 265 IGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
L K+ G +V++G + +E+ F +L V GS I + D A I
Sbjct: 271 TRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPF-VHRRAADLVATGAIE 329
Query: 323 AD--I-EVIPADYVNTALERLAK 342
D I I D + A
Sbjct: 330 IDRMISRRISLDEAPDVISNPAA 352
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 5e-43
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 29/303 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V KV IC +DLH+ + NEW + P + GHE+ G V E+G V +VGD
Sbjct: 28 GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGD 87
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V V + C C +C + C + G T G +++ V + +
Sbjct: 88 YVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKN 139
Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
P+ P + PL A V + L G V + G G LG + + AKA G
Sbjct: 140 PKSIPPEYATLQEPLGNA---VDTVLAG---PISGKSVLITGAGPLGLLGIAVAKASGAY 193
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMP 263
V V S ++ A +++GAD + ++D ++ M DG ++ A L
Sbjct: 194 PVIVSEPSDFRRELA-KKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALEQ 252
Query: 264 LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI-VGGSMIGGMKET-QEMIDFAAKHNI 321
+ + G++ L+G + + +L++ + + + G + ET + +
Sbjct: 253 GLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKL 312
Query: 322 RAD 324
D
Sbjct: 313 NLD 315
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 2e-42
Identities = 63/340 (18%), Positives = 114/340 (33%), Gaps = 38/340 (11%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP-----IVPGHEIVGVVTEVGSKVSK 87
+ + + + GIC +D ++ + + P +V GHE +GVV E
Sbjct: 22 KLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEES---YHG 78
Query: 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH 147
F GD V C C +C + ++C A + G + D
Sbjct: 79 FSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGEAGIHK----MDGFMREWWYDDPK 133
Query: 148 FVVRIPEGTPLDA--TAPLLCA---------GITVYSPLRFYGLDKPGMHVGVVGLGGLG 196
++V+IP+ PL V VVG G +G
Sbjct: 134 YLVKIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIG 193
Query: 197 HVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDT 254
+ + G++V + + + IE + + S D+++ ++G D IID
Sbjct: 194 VLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIIDA 253
Query: 255 V-SAVHPLMPLIGLLKSQGKLVLVG---APEKPLELPAFSLLMGRKI-VGGSMIGGMKET 309
+ V+ L +I LL G L L G + PL+ ++ + G + G
Sbjct: 254 TGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHF 313
Query: 310 QEMIDFAAKHNIRADIEV-------IPADYVNTALERLAK 342
Q+ + A + + L+ L +
Sbjct: 314 QQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLRE 353
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 1e-41
Identities = 71/327 (21%), Positives = 126/327 (38%), Gaps = 35/327 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+ +V K+ G+C SDL I G YPI GHE G + VGS V GD V
Sbjct: 24 HQDEVRVKIASSGLCGSDLPRIFKN-GAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAV- 81
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
+ C +C C + C K G+ GG+++ +V V +P
Sbjct: 82 ACVPLLPCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTD 134
Query: 156 TPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVT 211
P++ A P+ +++ +V ++G G +G +A++ A A+G VT
Sbjct: 135 MPIEDGAFIEPITVG---LHAFHL--AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVT 189
Query: 212 VISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
I S K + A + GA S + Q + I++T + +
Sbjct: 190 AIDISSEKLALA-KSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAVE 248
Query: 267 LLKSQGKLVLVGAPEKPLELPA--FSLLMGRKI-VGGSMIG-----GMKETQEMIDFAAK 318
+ +L LVG + L L + F ++ +++ V GS + +E + +
Sbjct: 249 IAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTE 308
Query: 319 HNIRAD--I-EVIPADYVNTALERLAK 342
+ + I + A+ +A+
Sbjct: 309 RKLSLEPLIAHRGSFESFAQAVRDIAR 335
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 2e-41
Identities = 70/328 (21%), Positives = 129/328 (39%), Gaps = 19/328 (5%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G K+V ++ + H D+ + K + P V G + GVV VG V F GD+V
Sbjct: 26 GPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEV 85
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
V SC C+ C +N CP+ + G +G Y++ +V E + P+
Sbjct: 86 -VINPGLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPK 137
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVI 213
+ A + +T + + +PG V V+ G+ A++ AK G +V
Sbjct: 138 NLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIAT 197
Query: 214 STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLL 268
+ S K + LGAD + D + G ++D A++ +I
Sbjct: 198 AGSEDKL-RRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGALY-FEGVIKAT 255
Query: 269 KSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-E 326
+ G++ + GA LP + + + GS + ++ F + ++ + +
Sbjct: 256 ANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQ 315
Query: 327 VIPADYVNTALERLAKADVRYRFVIDVA 354
V+P + L + V + V+ V
Sbjct: 316 VLPLEAAAEGHRLLEERRVFGKVVLQVG 343
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 5e-39
Identities = 60/301 (19%), Positives = 112/301 (37%), Gaps = 26/301 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIK-NEWGNAI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G ++ +V IC +DLH+ K + W P+V GHE GVV VG V + +VGD
Sbjct: 24 GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
V + + C +C +C + C + G GG+++ +V
Sbjct: 84 HVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVN 135
Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
P+ P + A P A V++ G V + G G +G +A +A G
Sbjct: 136 PKDLPFEVAAILEPFGNA---VHTVYAG-SG-VSGKSVLITGAGPIGLMAAMVVRASGAG 190
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQAAMGT-MDGIIDTVSAVHPLMPLI 265
+ V +P + + A + + ++ G+ ++ +++ + +
Sbjct: 191 PILVSDPNPYRLAFA-RPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGL 249
Query: 266 GLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI-VGGSMIGGMKET-QEMIDFAAKHNIRA 323
L G+ ++G P P+ L+ R I G + +T + +
Sbjct: 250 MALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDL 309
Query: 324 D 324
Sbjct: 310 S 310
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 7e-39
Identities = 78/335 (23%), Positives = 131/335 (39%), Gaps = 36/335 (10%)
Query: 43 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
+V +C +D++ + A++P+V GHE G+V VG V+ FK GDKV +
Sbjct: 39 QVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPFFAPQ 96
Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYH-----DGT--ITYGG-----------YSDIMVA 144
C+ C C L N C K+ D T T G +S V
Sbjct: 97 CKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVV 156
Query: 145 DEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAK 204
E + R+ + L+ + C + Y PG V GLG +G A+ K
Sbjct: 157 SEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCK 216
Query: 205 AMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSA 257
G ++ I + K +A + LGA L R+ D+ +Q + G +D +D
Sbjct: 217 IAGASRIIAIDINGEKFPKA-KALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT 275
Query: 258 VHPLMP-LIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE---MI 313
L + + G +VGA + +P +++GR I G+ GG K ++
Sbjct: 276 AQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSIN-GTFFGGWKSVDSVPNLV 334
Query: 314 DFAAKHNIRADI---EVIPADYVNTALERLAKADV 345
D+ +P + +N A++ + +
Sbjct: 335 SDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKS 369
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 3e-38
Identities = 74/292 (25%), Positives = 116/292 (39%), Gaps = 27/292 (9%)
Query: 40 VTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
V K+ +CH+D + + +P++ GH G+V VG V+K K GD V +
Sbjct: 34 VRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-IPLY 92
Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDIMVAD 145
+ C C C N C K+ +T DGT T G +S+ V
Sbjct: 93 IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
+ V +I PLD L C T Y +PG V GLGG+G + K
Sbjct: 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV 212
Query: 206 MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSAV 258
G ++ + + K + A + GA + +D + +Q + G +D + + V
Sbjct: 213 AGASRIIGVDINKDKFARA-KEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNV 271
Query: 259 HPLMPLIGLL-KSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMK 307
+ + K G V+VG A + + F L+ GR G+ GG K
Sbjct: 272 KVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWK-GTAFGGWK 322
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 7e-38
Identities = 84/346 (24%), Positives = 134/346 (38%), Gaps = 33/346 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
++ K+ G+CH+DL+ + +P+V GHE G+V VG V++F+ G+KV
Sbjct: 32 HANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDI 141
+ + C C C N C K + T G +S
Sbjct: 91 IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150
Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
V ++ V +I PLD L C T + +PG V GLG +G AV
Sbjct: 151 TVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM 210
Query: 202 FAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDT 254
+ G ++ + +P K +A + GA F+ D E + + G +D ++
Sbjct: 211 GCHSAGAKRIIAVDLNPDKFEKA-KVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 269
Query: 255 VSAVHPLMP-LIGLLKSQGKLVLVG-APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
V V + L LK G VLVG + L+ GR GSM GG K +
Sbjct: 270 VGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWK-GSMFGGFKGKDGV 328
Query: 313 ---IDFAAKHNIRADI---EVIPADYVNTALERLAKADVRYRFVID 352
+ ++ D +P + VN A++ + R V+
Sbjct: 329 PKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLS 373
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 2e-37
Identities = 68/315 (21%), Positives = 125/315 (39%), Gaps = 21/315 (6%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
GE D+ + + + D +++ G + +P VP ++ GVV VG V++F+ GD+V
Sbjct: 52 GEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGDRV 111
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
+ + G G S+ +V E + V P+
Sbjct: 112 -ISTFAPGWLDGLRPGTGRTPAYETL----------GGAHPGVLSEYVVLPEGWFVAAPK 160
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214
+ L CAG+T + L G + G V V G GG+ ++ AKA G +V V S
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIGLLK 269
+S +K + LGAD + ++D ++ I++ L + +
Sbjct: 221 SSR-EKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAG-LGQSLKAVA 278
Query: 270 SQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EV 327
G++ ++G E P LL+ +V G +G + ++++ + ++ I
Sbjct: 279 PDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVIDMR 338
Query: 328 IPADYVNTALERLAK 342
V AL L +
Sbjct: 339 YKFTEVPEALAHLDR 353
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 3e-37
Identities = 74/338 (21%), Positives = 127/338 (37%), Gaps = 32/338 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V KV G+CH+DL + ++ P V GHE G++ +G V++ +VGD
Sbjct: 30 QGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLGHEGSGIIEAIGPNVTELQVGDH-- 86
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIM----------TYANKYHDGTITYGGY------S 139
V G C C C YC + +A HD + + +
Sbjct: 87 VVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 146
Query: 140 DIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA 199
++ E+ V++ + P++ PL C T P G G +G A
Sbjct: 147 TYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSA 206
Query: 200 VKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDT 254
+ AK G + + S+ A + LGA + S+ QD + A G ++ +++
Sbjct: 207 LLAAKVCGASIIIAVDIVESRLELAKQ-LGATHVINSKTQDPVAAIKEITDGGVNFALES 265
Query: 255 VSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMK---ET 309
+ L + L GK+ +VGAP + LL+G K + G + G
Sbjct: 266 TGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFI 325
Query: 310 QEMIDFAAKHNIRAD--IEVIPADYVNTALERLAKADV 345
E++ + D ++ D +N A K
Sbjct: 326 PELVRLYQQGKFPFDQLVKFYAFDEINQAAIDSRKGIT 363
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 136 bits (346), Expect = 3e-37
Identities = 72/296 (24%), Positives = 119/296 (40%), Gaps = 28/296 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V K+ GIC SD H++ P++ GHE G+V +G V+ + GDKV
Sbjct: 32 KAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTTVRPGDKV- 89
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGT--ITYGG-----------YSDI 141
+ C C C N+C K ++ DGT T G +S
Sbjct: 90 IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149
Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
V DE V +I +PL+ + C T Y G V GLGG+G +
Sbjct: 150 TVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIM 209
Query: 202 FAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDT 254
KA G ++ + + K ++A + +GA + +D + + G +D +
Sbjct: 210 GCKAAGAARIIGVDINKDKFAKA-KEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268
Query: 255 VSAVHPLMPLIGLL-KSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMK 307
+ + ++ + ++ G V+VG + L + LL GR G++ GG K
Sbjct: 269 IGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWK-GAIFGGFK 323
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 1e-36
Identities = 75/273 (27%), Positives = 114/273 (41%), Gaps = 28/273 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKN-EWGNAI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
E +V ++ + GIC SD+H ++ + I P+V GHE G V +VG V K GD
Sbjct: 27 KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 86
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V V V CR C C N CP +T+ D G + V F ++
Sbjct: 87 RVAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADFCHKL 139
Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK 209
P+ L+ A PL V++ R + G V V+G G +G V+V AKA G
Sbjct: 140 PDNVSLEEGALLEPLSVG---VHACRR--AGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF 194
Query: 210 VTVISTSPSKKSEAIERLGADSFLV--SRDQDEMQAAM-------GTMDGIIDTVSAVHP 260
V + SP + A + GAD LV ++E + ID
Sbjct: 195 VVCTARSPRRLEVA-KNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKC 253
Query: 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
+ I + ++ G L+LVG + + +P +
Sbjct: 254 ITIGINITRTGGTLMLVGMGSQMVTVPLVNACA 286
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-36
Identities = 72/347 (20%), Positives = 135/347 (38%), Gaps = 49/347 (14%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHLIK-NEWG------NAIYPIVPGHEIVGVVTEVGSKV 85
R ++ KV CGIC SD+H+ + +E G +P+ GHE GVV E G +
Sbjct: 51 RIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEA 110
Query: 86 ------SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYS 139
+F++G+ V M+ C C CA N+C + G G ++
Sbjct: 111 INRRTNKRFEIGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFA 162
Query: 140 DIMVADEHFVVRIPEGT-------PLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGV 189
+ + D + + E A + P A + + G +PG +V +
Sbjct: 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVA---YNAVIVRGGGIRPGDNVVI 219
Query: 190 VGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM 248
+G G +G AV K G KV + S +++ A + LGAD + ++ ++A +
Sbjct: 220 LGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADHVIDPTKENFVEAVLDYT 278
Query: 249 DG-----IIDTVSAVHPLMPLIGLLKSQGK-----LVLVGAPEKPLELPAFSLLMGRKIV 298
+G ++ + P I + + + + +V + + L + R +
Sbjct: 279 NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQI 338
Query: 299 GGSMIGGMKET-QEMIDFAAKH-NIRADI-EVIPADYVNTALERLAK 342
GS T +I A ++ I + + + + ++RL
Sbjct: 339 VGSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRLQT 385
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 7e-36
Identities = 91/335 (27%), Positives = 140/335 (41%), Gaps = 34/335 (10%)
Query: 40 VTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCM 99
V K+ GIC SD ++K + +P++ GHE VGVV +G+ V+ K GDKV +
Sbjct: 37 VRIKILASGICGSDSSVLKEI-IPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-IPLF 94
Query: 100 VGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGT--ITYGG-----------YSDIMVAD 145
V C SC +C N+C K M D T T G +++ V
Sbjct: 95 VPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA 205
+ V +I PL++ + C T Y PG V GLGG+G A+ KA
Sbjct: 155 DIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKA 213
Query: 206 MG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAM-----GTMDGIIDTVSAV 258
G ++ + T K +A LGA L +D D+ + + G +D ++ +
Sbjct: 214 AGASRIIGVGTHKDKFPKA-IELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRI 272
Query: 259 HPL-MPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQ--EMI 313
+ L G V++G +P + L L LL GR + GS+ GG K + ++
Sbjct: 273 ETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLK-GSVFGGFKGEEVSRLV 331
Query: 314 DFAAKHNIRADI---EVIPADYVNTALERLAKADV 345
D K I + + D +N A E L+
Sbjct: 332 DDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG 366
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 3e-35
Identities = 57/363 (15%), Positives = 97/363 (26%), Gaps = 55/363 (15%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIY------------------PIVPGHEIVGV 77
+V V I ++ + E + V G + GV
Sbjct: 61 APDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGV 120
Query: 78 VTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG 137
V G V ++K GD V V + + +GG
Sbjct: 121 VVRTGIGVRRWKPGDHVIVHPA--HVDEQEPATHGDGMLGTEQRAWG------FETNFGG 172
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GG 194
++ V ++ P + A T Y L K G V + G GG
Sbjct: 173 LAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGG 232
Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------ 248
LG A++F K G + +S K+ A+ LG D + +
Sbjct: 233 LGSYAIQFVKNGGGIPVAVVSSAQKE-AAVRALGCDLVINRAELGITDDIADDPRRVVET 291
Query: 249 ----------------DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSL 291
D + + V + + + G +V G+ L
Sbjct: 292 GRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARRGGTVVTCGSSSGYLHTFDNRYL 350
Query: 292 LMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFV 350
M K + GS +E Q + + V P A + + +
Sbjct: 351 WMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVA 410
Query: 351 IDV 353
+
Sbjct: 411 VLC 413
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 3e-35
Identities = 73/279 (26%), Positives = 112/279 (40%), Gaps = 28/279 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKN-EWGNAI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V ++ GIC SD+H + GN I P+V GHE G V +VGS V K GD
Sbjct: 30 GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V + + + C + N P + + D G + F ++
Sbjct: 90 RVAIEPGA-PRENDEFCKMGRYNLSPS--IFFCATPPDD----GNLCRFYKHNAAFCYKL 142
Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
P+ + A PL +++ R G G V V G G +G V + AKAMG
Sbjct: 143 PDNVTFEEGALIEPLSVG---IHACRR--GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAA 197
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPL 261
+V V S ++ S+A + +GAD L + + A + I+ A +
Sbjct: 198 QVVVTDLSATRLSKA-KEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASI 256
Query: 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM-GRKIVG 299
I +S G LVLVG + +P + I G
Sbjct: 257 QAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKG 295
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 4e-34
Identities = 51/308 (16%), Positives = 98/308 (31%), Gaps = 25/308 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI---YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
+ + G+C +D +I G +V GHE VGVV + ++ + GD
Sbjct: 24 ESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPN--DTELEEGD 81
Query: 93 KVGVGCMVG-SCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVR 151
V + + + D + P + +G S+ + E ++VR
Sbjct: 82 IVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG----AHGYMSEFFTSPEKYLVR 137
Query: 152 IPEGTPLDATA--PLLCAGITVY-SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG- 207
IP P+ + + D V+G G LG + + K
Sbjct: 138 IPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDK 197
Query: 208 --VKVTVISTS--PSKKSEAIERLGADSFLVSRD-QDEMQAAMGTMDGIIDTVSAVHPLM 262
+ + P + IE L A + +++ MD I + +
Sbjct: 198 GYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYEATGFPKHAI 257
Query: 263 PLIGLLKSQGKLVLVGAP-----EKPLELPAFSLLMGRKIVGGSMIGGMKETQE-MIDFA 316
+ L G L+G P E +++ K + GS+ ++ + + F
Sbjct: 258 QSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAATVTFT 317
Query: 317 AKHNIRAD 324
+
Sbjct: 318 KLPKWFLE 325
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 2e-33
Identities = 59/363 (16%), Positives = 113/363 (31%), Gaps = 55/363 (15%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIY------------------PIVPGHEIVGV 77
G + V + ++ +H E + V G ++ GV
Sbjct: 69 GPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGV 128
Query: 78 VTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGG 137
V G V+ ++ GD+V C S ++ + ++ + +GG
Sbjct: 129 VLRTGPGVNAWQAGDEV--------VAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGG 180
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL--RFYGLDKPGMHVGVVGL-GG 194
++I + + ++ P+ + A T Y L R K G +V + G GG
Sbjct: 181 LAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGG 240
Query: 195 LGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------ 248
LG A +FA A G + +SP K E +GA++ + +
Sbjct: 241 LGSYATQFALAGGANPICVVSSPQKA-EICRAMGAEAIIDRNAEGYRFWKDENTQDPKEW 299
Query: 249 ----------------DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSL 291
D + + + + + G + + E L
Sbjct: 300 KRFGKRIRELTGGEDIDIVFEHPGRET-FGASVFVTRKGGTITTCASTSGYMHEYDNRYL 358
Query: 292 LMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFV 350
M K + GS +E E AK I + +V + A + + + +
Sbjct: 359 WMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVG 418
Query: 351 IDV 353
+
Sbjct: 419 VLC 421
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-30
Identities = 56/274 (20%), Positives = 99/274 (36%), Gaps = 30/274 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKN-EWGNAI--YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
E +VT V GIC SD+H K+ G I V GHE G V V V KVGD
Sbjct: 39 KEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGD 98
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V + V C +C+ C N C +V G + + +I
Sbjct: 99 RVAIEPQV-ICNACEPCLTGRYNGCERVDFLSTPPVP------GLLRRYVNHPAVWCHKI 151
Query: 153 PEGTPLDATA---PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV- 208
+ A PL + + R + G V + G G +G + + AKA G
Sbjct: 152 GN-MSYENGAMLEPL---SVALAGLQRAG--VRLGDPVLICGAGPIGLITMLCAKAAGAC 205
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRD----QDEMQAAMGTMDG-----IIDTVSAVH 259
+ + + A + + + + ++ + + + G ++
Sbjct: 206 PLVITDIDEGRLKFA-KEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVES 264
Query: 260 PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLM 293
+ I +K GK+ ++G + +++P +
Sbjct: 265 SIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASV 298
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-30
Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 58/302 (19%)
Query: 53 DLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAID 112
D IK N VPG + GV+ +VG+KV +G +V
Sbjct: 45 DWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGRRV------------------ 86
Query: 113 LENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVY 172
YH +G +++ V + V+ +P+ + A L C +T +
Sbjct: 87 -----------A---YHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAW 132
Query: 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232
L V +VG G + ++ + G V S S + G
Sbjct: 133 QAFEKIPL-TKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVSASLSQALAAKRGVRHL 189
Query: 233 LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
Q + I D V++ + L+ LK+ G ++ + PAF+
Sbjct: 190 YREPSQVTQK-----YFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRT 243
Query: 293 MGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI--------------EVIPADYVNTALE 338
+ + +G + + + D+ + ++ + + AL+
Sbjct: 244 ISYHEI---ALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALD 300
Query: 339 RL 340
Sbjct: 301 HS 302
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-27
Identities = 66/289 (22%), Positives = 110/289 (38%), Gaps = 38/289 (13%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P G++ G V E+GS V+ +GDKV M A
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGDKV---------------------------MGIAG 100
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
Y++ + A +++ E A L AG+T L + K G
Sbjct: 101 FPDHP----CCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEV-KQGDV 155
Query: 187 VGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
V + GG+GH+A++ AK G TVI+T+ + ++ LGA+ + ++D + A
Sbjct: 156 VLIHAGAGGVGHLAIQLAKQKG--TTVITTASKRNHAFLKALGAEQCINYHEEDFLLAIS 213
Query: 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG 305
+D +ID V + I LK G +V V + + R+ G
Sbjct: 214 TPVDAVIDLVGG-DVGIQSIDCLKETGCIVSVPTITAG-RVIEVAKQKHRRAFGLLKQFN 271
Query: 306 MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353
++E + ++ +R +I + TA E L VR + V V
Sbjct: 272 IEELHYLGKLVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFKV 320
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 9e-26
Identities = 63/345 (18%), Positives = 114/345 (33%), Gaps = 67/345 (19%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPI------VPGHEIVGVVTEVGSKVSKFK 89
DV K+ I SD+++I+ Y + V G+E V V VGS V+ K
Sbjct: 53 RGSDVRVKMLAAPINPSDINMIQGN-----YGLLPELPAVGGNEGVAQVVAVGSNVTGLK 107
Query: 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
GD V + G G + V E +
Sbjct: 108 PGDWV-IPANAG---------------------------------LGTWRTEAVFSEEAL 133
Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV 208
+++P PL + A L T Y L + +PG V G+G ++ A A+G+
Sbjct: 134 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL 193
Query: 209 KVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHP 260
+ + + +R LGA+ + + + D ++ V
Sbjct: 194 RTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALNCVGG-KS 252
Query: 261 LMPLIGLLKSQGKLVLVGAP-EKPLELPAFSLLMGRKIVGGSMIGGMKETQ--------- 310
L+ L G +V G ++P+ L+ + G + K+
Sbjct: 253 STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELI 312
Query: 311 -EMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353
+ D + + A +P +ALE K + + ++ +
Sbjct: 313 LTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-25
Identities = 63/304 (20%), Positives = 110/304 (36%), Gaps = 44/304 (14%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G D + C SD+H + + ++ GHE VG V EVGS+V FK GD+V
Sbjct: 23 GPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVV 82
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-------IMVADEHF 148
V + + + G + AD
Sbjct: 83 VPAIT-PDWRTSEVQRGYHQHSGGM--------LAGWKFSNVKDGVFGEFFHVNDAD-MN 132
Query: 149 VVRIPEGTPLDATAPL---LCAGITVYSPLRFYGLD----KPGMHVGVVGLGGLGHVAVK 201
+ +P+ PL+A + + G F+G + K G V V+G+G +G ++V
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTG--------FHGAELANIKLGDTVCVIGIGPVGLMSVA 184
Query: 202 FAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI-----IDTV 255
A +G ++ + + A GA + ++ D ++ + DG +
Sbjct: 185 GANHLGAGRIFAVGSRKHCCDIA-LEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAG 243
Query: 256 SAVHPLMPLIGLLKSQGKLVLVGAPEKPLELP----AFSLLMGRK-IVGGSMIGGMKETQ 310
VH + ++K + V + + + + MG K I GG GG +
Sbjct: 244 GDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRME 303
Query: 311 EMID 314
+ID
Sbjct: 304 RLID 307
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-24
Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 55/240 (22%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P V G + +GVV VG++V+ F GD V
Sbjct: 60 PRVLGFDAIGVVESVGNEVTMFNQGDIV-------------------------------- 87
Query: 127 KYHDGTITYGG-YSDIMVADEHFVVRIPEGTPLD----ATAPLLCAGITVY------SPL 175
Y+ G+ G ++ + +E V + P+ + + PL GIT Y +
Sbjct: 88 -YYSGSPDQNGSNAEYQLINERLVAKAPKN--ISAEQAVSLPL--TGITAYETLFDVFGI 142
Query: 176 RFYGLDKPGMHVGVV-GLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFL 233
+ G + ++ G GG+G +A + AKA G + VI+T S ++ E +++GAD L
Sbjct: 143 SRNRNENEGKTLLIINGAGGVGSIATQIAKAYG--LRVITTASRNETIEWTKKMGADIVL 200
Query: 234 VSRDQDEMQ---AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS 290
++ Q + +D + T + +I L+K +G + + A E +L A
Sbjct: 201 NHKESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALK 260
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 6e-24
Identities = 48/220 (21%), Positives = 74/220 (33%), Gaps = 41/220 (18%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P + G ++ G V VG +V F+VGD V
Sbjct: 64 PAILGMDLAGTVVAVGPEVDSFRVGDAV--------------FG-------------LTG 96
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPG 184
G ++ D + P + + PL IT + L + G
Sbjct: 97 GVGGLQ---GTHAQFAAVDARLLASKPAALTMRQASVLPL--VFITAWEGLVDRAQVQDG 151
Query: 185 MHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243
V + G GG+GHVA++ A A G V +T+ E + LGA SR+ ++ A
Sbjct: 152 QTVLIQGGGGGVGHVAIQIALARG--ARVFATARGSDLEYVRDLGATPIDASREPEDYAA 209
Query: 244 AM---GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280
D + DT+ L +K G +V
Sbjct: 210 EHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGW 248
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 1e-23
Identities = 50/245 (20%), Positives = 79/245 (32%), Gaps = 42/245 (17%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P+ G ++ GVV E G V FK GD+V +
Sbjct: 95 PLTLGRDVSGVVMECGLDVKYFKPGDEV-WAAV--------------------------- 126
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYG----LDK 182
G S+ +V + V P+ A L +T +S + G +
Sbjct: 127 ----PPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNC 182
Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-- 239
G V ++G GG+G A++ KA V + SE + +LGAD + +
Sbjct: 183 TGKRVLILGASGGVGTFAIQVMKAWD--AHVTAVCSQDASELVRKLGADDVIDYKSGSVE 240
Query: 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG 299
E ++ D I+D V LK V L + +
Sbjct: 241 EQLKSLKPFDFILDNVGG-STETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQT 299
Query: 300 GSMIG 304
G +G
Sbjct: 300 GVTVG 304
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 96.2 bits (240), Expect = 1e-22
Identities = 49/303 (16%), Positives = 95/303 (31%), Gaps = 47/303 (15%)
Query: 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPI 68
K G A L + A G V KV I SD+ IK ++G +
Sbjct: 22 TKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR 81
Query: 69 VPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK 127
G E VG + G + +K VG +V
Sbjct: 82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT----------------------------- 112
Query: 128 YHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
G +G +++ VA+ + + + + A ++ +T + +
Sbjct: 113 ---GLSNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQ-EGEKAF 168
Query: 188 GVV--GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ 242
V+ G L + + AK G + V + ++ +GA L + D ++
Sbjct: 169 -VMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-ALLKDIGAAHVLNEKAPDFEATLR 226
Query: 243 AAMGT--MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA--PEKPLELPAFSLLMGRKIV 298
M +D V+ + + + + ++ G P+ + L+ K +
Sbjct: 227 EVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHI 285
Query: 299 GGS 301
G
Sbjct: 286 EGF 288
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 3e-22
Identities = 51/320 (15%), Positives = 84/320 (26%), Gaps = 51/320 (15%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
V +V I SD + A G + G V VGS V+ +VGD+V
Sbjct: 35 PRDQVYVRVEAVAINPSDTSMRG---QFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV- 90
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
G C T G +S V +IP+G
Sbjct: 91 YGAQNEMCP--------------------------RTPDQGAFSQYTVTRGRVWAKIPKG 124
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-------------GLGGLGHVAVKF 202
+ A L T ++ GL P G V ++
Sbjct: 125 LSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQM 184
Query: 203 AKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ----AAMGTMDGIIDTVSAV 258
+ G I+T + + GA+ R + Q + +D ++ V
Sbjct: 185 LRLSG--YIPIATCSPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNV 242
Query: 259 HPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
+ G + P P ++ +G ++ G
Sbjct: 243 ESTTFCFAAIGRAGGHYVSLNPF-PEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGS 301
Query: 319 HNIRADIEVIPADYVNTALE 338
R E + +E
Sbjct: 302 EEERQFGEDL-WRIAGQLVE 320
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 4e-21
Identities = 52/245 (21%), Positives = 95/245 (38%), Gaps = 45/245 (18%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P PG ++ GV+ VG S FK GD+V +
Sbjct: 88 PYTPGSDVAGVIEAVGDNASAFKKGDRVFTSSTIS------------------------- 122
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
GGY++ +A +H V ++PE A + T Y L K G
Sbjct: 123 ---------GGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGES 173
Query: 187 VGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAA 244
V V G GG+G A + A+A G + ++ T+ ++ + + + GA R+ + +
Sbjct: 174 VLVHGASGGVGLAACQIARAYG--LKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKI 231
Query: 245 MGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG 299
+ II+ ++ V+ L + LL G++++VG+ +E+ + +
Sbjct: 232 KKYVGEKGIDIIIEMLANVN-LSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSII 289
Query: 300 GSMIG 304
G +
Sbjct: 290 GVTLF 294
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 5e-21
Identities = 48/275 (17%), Positives = 93/275 (33%), Gaps = 48/275 (17%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
+ +V ++ I SDL I + + I P +PG+E VG+V VG+ VS+ +G +V
Sbjct: 31 KDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRV 90
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
+ G + + + FVV IP+
Sbjct: 91 --------------LPL---------------------RGEGTWQEYVKTSADFVVPIPD 115
Query: 155 GTPLDATAPLLCAGITVYSPLR-FYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTV 212
A + +T + L + + V +GH+ + ++ + +
Sbjct: 116 SIDDFTAAQMYINPLTAWVTCTETLNL-QRNDVLLVNACGSAIGHLFAQLSQILN--FRL 172
Query: 213 IST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMPLIG 266
I+ +K +E + RLGA + + + M +G ID++ L
Sbjct: 173 IAVTRNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGG-PDGNELAF 231
Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGS 301
L+ G + +G A + +
Sbjct: 232 SLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIF 266
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 5e-21
Identities = 51/235 (21%), Positives = 87/235 (37%), Gaps = 46/235 (19%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
V G++ G+V+ VG V+ F+ GD+V
Sbjct: 82 WKVIGYDAAGIVSAVGPDVTLFRPGDEV-------------------------------- 109
Query: 127 KYHDGTITYGG-YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPL-RFYGLDKPG 184
++ G+I G ++ + DE V R P+ A L IT + ++KP
Sbjct: 110 -FYAGSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPV 168
Query: 185 MHVG-----VVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQ 238
V G GG+G +AV+ A+ +TVI+T S + E ++ LGA +
Sbjct: 169 PGAAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKSLGAHHVIDHSKP 227
Query: 239 DEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS 290
+ A +G + T + L+ QG+ L+ P ++ F
Sbjct: 228 LAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPS-AFDIMLFK 281
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 9e-21
Identities = 49/350 (14%), Positives = 96/350 (27%), Gaps = 60/350 (17%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIK----------NEWGNAIYPIVPGHEIVGVVTEVGSKV 85
+V K + SD++ I+ +G G+E + V +VGS V
Sbjct: 32 APNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNV 91
Query: 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD 145
S + GD V + V T+ + +
Sbjct: 92 SSLEAGDWV-IPSHVNFG-------------------TWRTH---ALGNDDDFIKLPNPA 128
Query: 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFA 203
+ P G ++ A + +T Y L Y PG + G +G A +
Sbjct: 129 QSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIG 188
Query: 204 KAMGVKV-TVISTSPSK--KSEAIERLGADSFLVSRDQDEMQAAM----------GTMDG 250
K + +VI P+ +++ LGA + + + G
Sbjct: 189 KLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKL 248
Query: 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG---- 305
++ V + L + G ++ G P+ +P + G +
Sbjct: 249 ALNCVGG-KSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKN 307
Query: 306 -----MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRF 349
++I + + + D E +
Sbjct: 308 NKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKD 357
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-20
Identities = 61/236 (25%), Positives = 89/236 (37%), Gaps = 30/236 (12%)
Query: 34 ATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDK 93
E V KV IC SD H+++ A +V GHEI G V E G V ++GD
Sbjct: 30 KKIEHGVILKVVSTNICGSDQHMVRGR-TTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88
Query: 94 VGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-----------IM 142
V V V +C C SC C V N G GY D ++
Sbjct: 89 VSVPFNV-ACGRCRSCKEMHTGVCLTV-----NPARAGGA--YGYVDMGDWTGGQAEYVL 140
Query: 143 V--ADEHFVVRIPEGTPLDATAP--LLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLG 196
V AD ++++P+ + I T Y G+ PG V V G G +G
Sbjct: 141 VPYAD-FNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGV-GPGSTVYVAGAGPVG 198
Query: 197 HVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251
A A+ +G V V +P++ + A + G + +S D + +
Sbjct: 199 LAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEIADLSLDTPLHEQIAALLGEP 253
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 90.0 bits (224), Expect = 2e-20
Identities = 57/305 (18%), Positives = 105/305 (34%), Gaps = 62/305 (20%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
+ ++ +V CG+ DL + + N P+VPG E G+V +G V +++GD+V
Sbjct: 29 QDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV 88
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
A + Y +++++ FV +IP+
Sbjct: 89 --------------MAF---------------------VNYNAWAEVVCTPVEFVYKIPD 113
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVI 213
A +T Y L + GM V V GG+G + + V
Sbjct: 114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVT-VF 172
Query: 214 STSPSKKSEAIERLGADSFLVSRDQD---EMQAAMGT-MDGIIDTVSAVHPLMPLIGLLK 269
T+ + K EAI+ L R+ D E++ +D ++D + + + LLK
Sbjct: 173 GTASTFKHEAIKDSVTH--LFDRNADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLK 229
Query: 270 SQGKLVLVG-----------------APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
G +L G + + ++ L K++ G + + Q
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGR 289
Query: 313 IDFAA 317
Sbjct: 290 AGLIR 294
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 1e-19
Identities = 57/234 (24%), Positives = 90/234 (38%), Gaps = 30/234 (12%)
Query: 43 KVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGS 102
KV IC SD H+ + + V GHEI G V E GS V +GD V V V +
Sbjct: 38 KVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNV-A 95
Query: 103 CRSCDSCAIDLENYCPKVIMTYANKYHDGTI---TYGGYSD-----IMV--ADEHFVVRI 152
C C +C + C N D G+S ++V AD + +++
Sbjct: 96 CGRCRNCKEARSDVCEN---NLVNPDADLGAFGFDLKGWSGGQAEYVLVPYAD-YMLLKF 151
Query: 153 PEGTPLDATAP--LLCAGI--TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 208
+ L + I T + G+ KPG HV + G G +G A A+ +G
Sbjct: 152 GDKEQAMEKIKDLTLISDILPTGFHGCVSAGV-KPGSHVYIAGAGPVGRCAAAGARLLGA 210
Query: 209 K-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTM------DGIIDTV 255
V V +P + G ++ + R+ ++ + + D +D V
Sbjct: 211 ACVIVGDQNPERLKLL-SDAGFET-IDLRNSAPLRDQIDQILGKPEVDCGVDAV 262
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 2e-19
Identities = 57/242 (23%), Positives = 92/242 (38%), Gaps = 44/242 (18%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
+ G E+ G + VG VS + VGDKV C +
Sbjct: 86 SPILGLELSGEIVGVGPGVSGYAVGDKV--------------CGL--------------- 116
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
G Y++ + ++ P+G A L TV++ L G
Sbjct: 117 ------ANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGES 170
Query: 187 VGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ 242
V + G G+G A++ A+A G +V + S K EA ERLGA + R +D ++
Sbjct: 171 VLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC-EACERLGAKRGINYRSEDFAAVIK 229
Query: 243 AAMGT-MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVG 299
A G +D I+D + A + I L G L ++ ++ +++ R V
Sbjct: 230 AETGQGVDIILDMIGAAY-FERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVT 288
Query: 300 GS 301
GS
Sbjct: 289 GS 290
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 85.0 bits (211), Expect = 1e-18
Identities = 66/327 (20%), Positives = 111/327 (33%), Gaps = 67/327 (20%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPI------VPGHEIVGVVTEVGSKVSKFK 89
G V V G+C D + K E Y + VPG E GVV + S K
Sbjct: 47 GPNVVVVDVKAAGVCFPDYLMTKGE-----YQLKMEPPFVPGIETAGVVRSAP-EGSGIK 100
Query: 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
GD+V A GGY++ + +
Sbjct: 101 PGDRV--------------MAF---------------------NFIGGYAERVAVAPSNI 125
Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
+ P L+ T+Y G + G V V+G GG+G A++ AK MG
Sbjct: 126 LPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA 185
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMP 263
KV + + +E ++ +GAD ++ ++ +A G ++D +
Sbjct: 186 KVIAVVNRTA-ATEFVKSVGAD-IVLPLEEGWAKAVREATGGAGVDMVVDPIGGPA-FDD 242
Query: 264 LIGLLKSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
+ L S+G+L++VG P + LL+ + G G T + + +
Sbjct: 243 AVRTLASEGRLLVVGFAAGGIP-TIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGL 301
Query: 322 RADIE-----VIPADYVNTALERLAKA 343
+ + A L +A
Sbjct: 302 EKLVAEGMRPPVSARI---PLSEGRQA 325
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 81.0 bits (201), Expect = 2e-17
Identities = 60/275 (21%), Positives = 100/275 (36%), Gaps = 65/275 (23%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPI------VPGHEIVGVVTEVGSKVSKFK 89
E +V +V G+ +D + Y +PG E+VGVV
Sbjct: 24 EEGEVVLRVEAVGLNFADHLMRLGA-----YLTRLHPPFIPGMEVVGVV----------- 67
Query: 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
G + A+ + GG ++ + + +
Sbjct: 68 EGRRY--------------AAL---------------------VPQGGLAERVAVPKGAL 92
Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGV 208
+ +PEG + A + +T Y L+ +PG V V G LG AV+ A+AMG+
Sbjct: 93 LPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGL 151
Query: 209 KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLL 268
+V ++ P K LGA+ + E A G +D +++ + +GLL
Sbjct: 152 RVLAAASRPEKL-ALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKE--VEESLGLL 208
Query: 269 KSQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGS 301
G+LV +GA E +P L+ V G
Sbjct: 209 AHGGRLVYIGAAEGEVA-PIPPLRLMRRNLAVLGF 242
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 3e-17
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 38/206 (18%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
E ++ + GI D ++ + P G E G+V++VGS V K GD+V
Sbjct: 27 AENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVV 86
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
YA G YS + +P
Sbjct: 87 ----------------------------YA------QSALGAYSSVHNIIADKAAILPAA 112
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214
+ A G+TVY LR KP GG+G +A ++AKA+G +I
Sbjct: 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALG--AKLIG 170
Query: 215 TSPSK-KSEAIERLGADSFLVSRDQD 239
T + K+++ + GA + R++D
Sbjct: 171 TVGTAQKAQSALKAGAWQVINYREED 196
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-16
Identities = 53/206 (25%), Positives = 82/206 (39%), Gaps = 38/206 (18%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G + V + G+ D + + P G E GVV VG +V++FKVGD+V
Sbjct: 27 GPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVA 86
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
Y T G YS++ V E +V++ +
Sbjct: 87 ----------------------------YG------TGPLGAYSEVHVLPEANLVKLADS 112
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVKVTVIS 214
+ A L+ G+TV LR KPG + GG+G +A ++AKA+G +I
Sbjct: 113 VSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIG 170
Query: 215 TSPSK-KSEAIERLGADSFLVSRDQD 239
T S K+ + LGA + +D
Sbjct: 171 TVSSPEKAAHAKALGAWETIDYSHED 196
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 78.8 bits (195), Expect = 1e-16
Identities = 65/298 (21%), Positives = 106/298 (35%), Gaps = 52/298 (17%)
Query: 36 GEKDVTFKVTHCGICHSDLHL---IKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G V + T G+ D + I + PIV G E VV EVG V+ F VG+
Sbjct: 27 GPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGE 86
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V C G YS + ++++
Sbjct: 87 RVC--------------------TC--------------LPPLGAYSQERLYPAEKLIKV 112
Query: 153 PEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGV-VGLGGLGHVAVKFAKAMGVK 209
P+ LD A L+ G+T L KPG +V + GG+GH+ V +A+ +G
Sbjct: 113 PKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLG-- 170
Query: 210 VTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTVSAVHPLMP 263
TVI T ++ K+E +LG + QD + G + D++ L
Sbjct: 171 ATVIGTVSTEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT-LQK 229
Query: 264 LIGLLKSQGKLVLVGA---PEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
+ L+ +G G P+ + + G + + + ID +K
Sbjct: 230 SLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSK 287
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 1e-15
Identities = 45/251 (17%), Positives = 84/251 (33%), Gaps = 54/251 (21%)
Query: 67 PIVPGHEIVGVVTEVG-SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
P G E +G V +G S +++ VG V
Sbjct: 84 PFDIGFEGIGEVVALGLSASARYTVGQAVA------------------------------ 113
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
+ G +++ V +P LL +G T Y L+ G G
Sbjct: 114 ------YMAPGSFAEYTVVPASIATPVPSV--KPEYLTLLVSGTTAYISLKELGGLSEGK 165
Query: 186 HVGVV--GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---E 240
V +V GG G A++ +K V +S +KS ++ LG D + + +
Sbjct: 166 KV-LVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD-EKSAFLKSLGCDRPINYKTEPVGTV 223
Query: 241 MQAAMGT-MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA-----PEKPLELPAFSLLMG 294
++ +D + ++V + L ++G+L+++G L L
Sbjct: 224 LKQEYPEGVDVVYESVGGAM-FDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPA 282
Query: 295 RKIV-GGSMIG 304
+ + S+ G
Sbjct: 283 KLLKKSASVQG 293
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 1e-15
Identities = 52/239 (21%), Positives = 89/239 (37%), Gaps = 45/239 (18%)
Query: 67 PIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
+ G E G V E+G +K+GD A+
Sbjct: 80 SNILGLEASGHVAELGPGCQGHWKIGDTA--------------MAL-------------- 111
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGM 185
+ GG + + E ++ IPEG L A + A +T + L G + G
Sbjct: 112 -------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGD 164
Query: 186 HVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA 244
+V + GL G+G A++ + G V + S K + E+LGA + + +D +A
Sbjct: 165 YVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL-QMAEKLGAAAGFNYKKEDFSEAT 223
Query: 245 MGTMDG-----IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKI 297
+ G I+D + + + L G+ VL G + P FS L+ ++
Sbjct: 224 LKFTKGAGVNLILDCIGGSY-WEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRG 281
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 75.4 bits (185), Expect = 3e-15
Identities = 28/185 (15%), Positives = 49/185 (26%), Gaps = 38/185 (20%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
+ G+E GVV E GS + + K V + G
Sbjct: 91 SMPVGNEGAGVVVEAGSSPAAQALMGKT-VAAIGG------------------------- 124
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMH 186
YS + +PEG A +T + L +
Sbjct: 125 ---------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRL-EGHSA 174
Query: 187 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245
+ LG + + G+K+ I + + ++ GA + MQ
Sbjct: 175 LVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-DLLKAQGAVHVCNAASPTFMQDLT 233
Query: 246 GTMDG 250
+
Sbjct: 234 EALVS 238
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 73.2 bits (180), Expect = 3e-14
Identities = 50/250 (20%), Positives = 73/250 (29%), Gaps = 62/250 (24%)
Query: 3 QAPEQEHPKNAFGWAARDTSGVLSPFHF-----SRRATGEKDVTFKVTHCGICHSDLHLI 57
P G L + G+ +V + G+ D +
Sbjct: 199 SDDVLPVPDGTGWRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIA 258
Query: 58 KNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYC 117
G G E GVV E G V+ GD+V +G + +
Sbjct: 259 L---GMYPGVASLGSEGAGVVVETGPGVTGLAPGDRV-MGMIPKAFGP------------ 302
Query: 118 PKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177
+ VAD V RIP G A + +T Y
Sbjct: 303 -----------------------LAVADHRMVTRIPAGWSFARAASVPIVFLTAY----- 334
Query: 178 YGLD-----KPGMHVGV-VGLGGLGHVAVKFAKAMGVKV--TVISTSPSKKSEAIERLGA 229
Y L +PG + V GG+G A++ A+ +G +V T S K L
Sbjct: 335 YALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA---SEDKWQAV--ELSR 389
Query: 230 DSFLVSRDQD 239
+ SR D
Sbjct: 390 EHLASSRTCD 399
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 1e-13
Identities = 40/178 (22%), Positives = 63/178 (35%), Gaps = 42/178 (23%)
Query: 67 PIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN 126
P V G E G V G V+ F+VGD+V Y
Sbjct: 64 PYVLGREASGTVVAKGKGVTNFEVGDQVA----------------------------YI- 94
Query: 127 KYHDGTITYGGYSDIMVADEHFVVRIPEGTP---LDATAPLLCAGITVYSPLRFYGLDKP 183
T+ YS I V+++P+GT L A L +T S K
Sbjct: 95 ----SNSTFAQYSKISSQGP--VMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKK 148
Query: 184 GMHVGV-VGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQD 239
G +V + GG+G + + K G I+ + + K + + GA+ + + +D
Sbjct: 149 GDYVLLFAAAGGVGLILNQLLKMKG--AHTIAVASTDEKLKIAKEYGAEYLINASKED 204
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 2e-11
Identities = 55/302 (18%), Positives = 100/302 (33%), Gaps = 49/302 (16%)
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
+P++PG + G V S+ +F G +V +
Sbjct: 57 FPMIPGIDFAGTVHA--SEDPRFHAGQEVLL----------------------------- 85
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
+ G +GG ++ ++V +P G + AG T L G+
Sbjct: 86 TGWGVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRP 145
Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
V V G GG+G AV +G +V + + ++ LGA+ ++SRD+
Sbjct: 146 QDGEVVVTGASGGVGSTAVALLHKLGYQVAAV-SGRESTHGYLKSLGANR-ILSRDEFAE 203
Query: 242 QAAMGTM--DGIIDTVSAVHPLMPLIGLLKSQGKLV---LVGAPEKPLELPAFSLLMGRK 296
+ G IDTV L ++ + G + L G P + F +L +
Sbjct: 204 SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYGGCVAACGLAGGFALPTTVMPF-ILRNVR 261
Query: 297 IVG-GSMIGGMKETQEMIDFAAKH----NIRADIEVIPADYVNTALERLAKADVRYRFVI 351
+ G S++ E K I + + V+ R ++
Sbjct: 262 LQGVDSVMTPPARRAEAWARLVKDLPESFYAQAATEITLADAPKFADAIINNQVQGRTLV 321
Query: 352 DV 353
+
Sbjct: 322 KI 323
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 4e-11
Identities = 41/200 (20%), Positives = 65/200 (32%), Gaps = 45/200 (22%)
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP++ G + G V S +F GD+V
Sbjct: 61 YPLILGIDAAGTVVS--SNDPRFAEGDEVIA----------------------------- 89
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
Y G GG S+ ++V +P+ L AG T L GL
Sbjct: 90 TSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSP 149
Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
V V G GG+G +AV G V T + ++ +++LGA + ++++
Sbjct: 150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVAS-TGNREAADYLKQLGASEVI---SREDV 205
Query: 242 QAAMG------TMDGIIDTV 255
G +D V
Sbjct: 206 YDGTLKALSKQQWQGAVDPV 225
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 4e-10
Identities = 68/310 (21%), Positives = 116/310 (37%), Gaps = 62/310 (20%)
Query: 66 YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
YP VPG ++ GVV S+ +F+ GD+V
Sbjct: 60 YPFVPGIDLAGVVVS--SQHPRFREGDEVIA----------------------------- 88
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITV---YSPLRFYGLDK 182
Y G +GGYS+ ++V +P+G L + AG T L +GL
Sbjct: 89 TGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTP 148
Query: 183 PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
V V G GG+G +AV G V T + + + + LGA L ++++
Sbjct: 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEAS-TGKAAEHDYLRVLGAKEVL---AREDV 204
Query: 242 QAAMG------TMDGIIDTVSAVHPLMPLIGLLKSQGKLV---LVGAPEKPLELPA---- 288
A +D V L ++ ++ G + L G E+P
Sbjct: 205 MAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYGGAVAVSGLTGGA----EVPTTVHP 259
Query: 289 FSLLMGRKIVG-GSMIGGMKETQEMIDFAAKH---NIRADIEVIPADYVNTALERLAKAD 344
F +L G ++G S+ M + + A ++ + I + AL+R+ + +
Sbjct: 260 F-ILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPDLERIAQEISLAELPQALKRILRGE 318
Query: 345 VRYRFVIDVA 354
+R R V+ +A
Sbjct: 319 LRGRTVVRLA 328
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 53.3 bits (128), Expect = 9e-08
Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 39/175 (22%)
Query: 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY 128
+PG + + G +V M
Sbjct: 1588 IPGKWLTRDCMLGMEFSGRDASGRRV---------------------------M------ 1614
Query: 129 HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVG 188
G + G + ++ +H +P L+ A + T Y L G +PG V
Sbjct: 1615 --GMVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVL 1672
Query: 189 V-VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQD 239
+ G GG+G A+ A + G +V S K++ R L F SRD
Sbjct: 1673 IHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTS 1727
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 50.3 bits (120), Expect = 3e-07
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
G +V V+GLG +G + A+G KV V + + E +G + F +
Sbjct: 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF----HISKAA 208
Query: 243 AAMGTMDGIIDTV 255
+ +D I+T+
Sbjct: 209 QELRDVDVCINTI 221
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.9 bits (118), Expect = 9e-07
Identities = 48/326 (14%), Positives = 87/326 (26%), Gaps = 119/326 (36%)
Query: 110 AIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169
I E P ++ + D Y+D V ++ V R+
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRL-----YNDNQVFAKYNVSRLQP--------------- 136
Query: 170 TVYSPLR--FYGLDKPGMHVGVVGLGGLG-HVAV-------KFAKAMGVKV---TV---- 212
Y LR L +P +V + G+ G G K M K+ +
Sbjct: 137 --YLKLRQALLEL-RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCN 193
Query: 213 --------------------------ISTSPSKKSEAIERL--------GADSFLVSRD- 237
S + L + LV +
Sbjct: 194 SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV 253
Query: 238 QD-EMQAAMG--------TMD-GIIDTVSA---VHPLM--PLIGLLKSQGKLVL---VGA 279
Q+ + A T + D +SA H + + L + K +L +
Sbjct: 254 QNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD- 312
Query: 280 PEKPLELPAFSLLMGRKIVGG-----SMIGGM-KETQEMIDFAAKHNIRADIEVIPADYV 333
+P +LP R+++ S+I ++ D N +I
Sbjct: 313 -CRPQDLP-------REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII----- 359
Query: 334 NTALERLAKADVR--YR-FVI---DV 353
++L L A+ R + +
Sbjct: 360 ESSLNVLEPAEYRKMFDRLSVFPPSA 385
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 5e-06
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 12/110 (10%)
Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLD-----KPGMHVGV-VGLGGLGHVAV 200
VV IP+ + A A +T + + L PG V + GG+G AV
Sbjct: 2 DLVVPIPDTLADNEAATFGVAYLTAW-----HSLCEVGRLSPGERVLIHSATGGVGMAAV 56
Query: 201 KFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250
AK +G ++ + S +K+ E + RLG + SR D + DG
Sbjct: 57 SIAKMIGARIYTTAGSDAKR-EMLSRLGVEYVGDSRSVDFADEILELTDG 105
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Length = 324 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 10/47 (21%), Positives = 20/47 (42%)
Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
G + ++G G +G K G+KV +S S +++ +
Sbjct: 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLP 186
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Length = 364 | Back alignment and structure |
|---|
Score = 41.7 bits (99), Expect = 2e-04
Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 8/101 (7%)
Query: 138 YSDIM--VADE-HFVVRIPE-----GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 189
D M + E +V I G P TA + G+ + F G+ V V
Sbjct: 119 TVDDMDLIHQETDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKEAFGSDSLEGLAVSV 178
Query: 190 VGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230
GLG + K G K+ V + + S A+ GAD
Sbjct: 179 QGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 219
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A Length = 315 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 3e-04
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADSF 232
VG++G G LG + +A G + S S K +E G +
Sbjct: 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSR-KSWPGVESYVGREEL 187
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 3e-04
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Query: 180 LDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238
L GM V VVG G + + K G + + + + E + GA +V+ +
Sbjct: 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRERGASDIVVANLE 75
Query: 239 DEMQAAMGTMDGIIDTVSA 257
++ A ++D ++ +
Sbjct: 76 EDFSHAFASIDAVVFAAGS 94
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Length = 334 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 4e-04
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228
+ P F G D G +G++GLG +G K AK ++ ++ S ++K E L
Sbjct: 135 GVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMR--ILYYSRTRKEEVERELN 192
Query: 229 A 229
A
Sbjct: 193 A 193
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 10/49 (20%), Positives = 20/49 (40%)
Query: 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF 232
G + + G G +G A A+G+ V ++T+ E + +
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHETVAFTAT 185
|
| >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 Length = 323 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 5e-04
Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 38/145 (26%)
Query: 185 MHVGVVGLGGLG--HVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
+ + ++GLG + A+ +++ + + +P R + D ++
Sbjct: 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSA--TCTDYRDV- 59
Query: 243 AAMGTMDGIIDTVS-----AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKI 297
+ +D V VH L G V +KPL A S
Sbjct: 60 -----LQYGVDAVMIHAATDVHS--TLAAFFLHLGIPTFV---DKPL---AASA------ 100
Query: 298 VGGSMIGGMKETQEMIDFAAKHNIR 322
+E + + + A KH+
Sbjct: 101 ---------QECENLYELAEKHHQP 116
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 6e-04
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQ 242
G V V+GLG G + A+G V V + S + + E DE++
Sbjct: 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHT-----DELK 210
Query: 243 AAMGTMDGIIDTVSA 257
+ +D I+T+ +
Sbjct: 211 EHVKDIDICINTIPS 225
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.86 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 99.13 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 99.03 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 99.01 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 99.0 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.99 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.96 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.81 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.73 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.57 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.53 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.46 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 98.32 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 98.21 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.21 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.14 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.13 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 98.09 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 98.03 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.03 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 98.02 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.97 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.92 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.84 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 97.78 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.74 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.7 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 97.69 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.69 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 97.68 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 97.67 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.66 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.66 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 97.65 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.64 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.63 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.63 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 97.62 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 97.6 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.59 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.59 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.58 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.57 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 97.56 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.55 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.55 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 97.55 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 97.55 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 97.54 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.54 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 97.53 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 97.53 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 97.53 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.53 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.52 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.52 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.51 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.49 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.48 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.48 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 97.47 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.46 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 97.46 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.46 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.46 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.45 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 97.45 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.45 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.45 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.44 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 97.44 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 97.44 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 97.44 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.44 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.44 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.43 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.43 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.42 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 97.41 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 97.41 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 97.41 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 97.4 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 97.4 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 97.38 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 97.38 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.38 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 97.38 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 97.37 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.37 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.36 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 97.34 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.33 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 97.33 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.32 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.32 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 97.32 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.32 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.31 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 97.3 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 97.3 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.3 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.29 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 97.29 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 97.29 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 97.29 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.29 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.28 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.28 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 97.28 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.28 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.28 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.27 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 97.27 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 97.27 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.27 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 97.26 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.26 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 97.26 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.25 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.25 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 97.25 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 97.25 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 97.25 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 97.25 | |
| 1a4i_A | 301 | Methylenetetrahydrofolate dehydrogenase / methenyl | 97.24 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 97.24 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 97.24 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.24 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.24 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.24 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 97.24 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 97.24 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.23 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 97.23 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 97.23 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 97.22 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 97.21 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 97.21 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 97.21 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 97.2 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 97.2 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 97.2 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 97.19 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.19 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.18 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 97.18 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.17 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.16 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 97.16 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 97.16 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 97.16 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 97.16 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.16 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 97.15 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.14 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.14 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.13 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 97.13 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.13 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.13 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 97.13 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 97.13 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 97.13 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.12 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 97.12 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 97.12 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 97.12 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 97.11 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 97.11 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 97.1 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 97.1 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 97.1 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.08 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.08 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 97.08 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 97.08 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 97.07 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 97.07 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.06 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 97.06 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 97.04 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.03 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 97.03 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 97.02 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 97.02 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 97.02 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 97.01 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 97.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 97.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 97.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 96.99 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 96.99 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 96.98 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 96.96 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 96.96 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.96 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 96.96 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 96.95 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 96.95 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 96.95 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 96.94 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 96.94 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 96.94 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 96.94 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 96.94 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 96.94 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.93 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 96.93 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.93 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 96.92 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.91 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 96.91 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 96.9 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 96.9 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.89 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 96.89 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.89 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 96.89 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 96.89 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.89 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 96.89 | |
| 2c2x_A | 281 | Methylenetetrahydrofolate dehydrogenase- methenylt | 96.88 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 96.88 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 96.88 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 96.88 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 96.87 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 96.85 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 96.85 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.85 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 96.85 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 96.85 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 96.85 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 96.85 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.85 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 96.84 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 96.84 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 96.84 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 96.84 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.82 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 96.81 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 96.81 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 96.79 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.78 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.78 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 96.78 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 96.78 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 96.77 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 96.77 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 96.76 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 96.76 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 96.76 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 96.75 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 96.75 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 96.74 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 96.73 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.72 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 96.72 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 96.72 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.71 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 96.7 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.7 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 96.7 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 96.69 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 96.69 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.69 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 96.68 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 96.68 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 96.66 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 96.66 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 96.65 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 96.64 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 96.63 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.62 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 96.62 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.61 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 96.61 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 96.61 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 96.6 | |
| 1omo_A | 322 | Alanine dehydrogenase; two-domain, beta-sandwich-d | 96.6 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 96.59 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 96.58 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 96.58 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 96.58 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 96.58 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 96.57 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.56 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 96.56 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 96.56 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.56 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.55 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.55 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 96.54 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 96.51 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 96.51 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 96.5 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.49 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 96.48 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 96.47 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.47 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 96.47 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 96.44 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 96.43 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 96.41 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 96.41 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 96.41 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.4 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 96.39 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 96.39 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.39 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.37 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 96.36 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 96.36 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 96.36 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 96.34 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 96.34 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 96.33 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 96.33 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 96.31 | |
| 2i99_A | 312 | MU-crystallin homolog; thyroid hormine binding pro | 96.31 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 96.31 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.31 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 96.29 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 96.28 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 96.28 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 96.27 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 96.26 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 96.26 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.25 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 96.24 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 96.24 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 96.24 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.23 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 96.23 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 96.21 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.19 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.18 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 96.16 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.14 | |
| 1j4a_A | 333 | D-LDH, D-lactate dehydrogenase; NAD-dependent dehy | 96.11 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 96.11 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.11 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 96.11 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 96.1 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 96.09 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 96.09 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 96.09 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 96.09 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.08 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 96.08 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 96.07 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 96.07 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.04 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 96.04 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 96.04 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.02 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.01 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.01 | |
| 3hdj_A | 313 | Probable ornithine cyclodeaminase; APC62486, borde | 96.01 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 96.01 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.0 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 95.99 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 95.97 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 95.96 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 95.95 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 95.94 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 95.94 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 95.94 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 95.93 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 95.92 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 95.92 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 95.92 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 95.92 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 95.91 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 95.9 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 95.89 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 95.89 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 95.88 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 95.88 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 95.87 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 95.87 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 95.81 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 95.79 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 95.79 | |
| 1xea_A | 323 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 95.78 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 95.78 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 95.74 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 95.73 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 95.72 | |
| 3ezy_A | 344 | Dehydrogenase; structural genomics, unknown functi | 95.69 | |
| 2gb4_A | 252 | Thiopurine S-methyltransferase; 18204406, thiopuri | 95.69 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 95.67 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 95.67 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.65 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 95.64 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 95.64 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.64 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 95.63 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 95.61 | |
| 1dxy_A | 333 | D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc | 95.58 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 95.58 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 95.57 | |
| 2a9f_A | 398 | Putative malic enzyme ((S)-malate:NAD+ oxidoreduct | 95.57 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 95.56 | |
| 3v5n_A | 417 | Oxidoreductase; structural genomics, PSI-biology, | 95.54 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 95.54 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 95.53 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 95.52 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 95.5 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 95.5 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 95.49 | |
| 3dty_A | 398 | Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetram | 95.48 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.45 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 95.44 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 95.42 | |
| 1xdw_A | 331 | NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas | 95.41 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 95.41 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 95.4 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 95.39 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 95.39 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 95.39 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 95.36 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 95.34 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 95.34 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 95.33 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 95.32 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.32 | |
| 3i23_A | 349 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 95.3 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 95.29 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 95.29 |
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-62 Score=453.11 Aligned_cols=349 Identities=52% Similarity=0.958 Sum_probs=308.6
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
|..+|+++++...+.++.+++.++|.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|+++|++++
T Consensus 4 m~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~ 83 (357)
T 2cf5_A 4 MEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_dssp --CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCC
T ss_pred ccCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCC
Confidence 45678888888888888999999999999999999999999999999999988765557899999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccch
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~ 166 (361)
+|++||||++.+..+.|++|.+|++|.++.|++..+.+.+....+....|+|+||+.+|++.++++|+++++++||++++
T Consensus 84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~ 163 (357)
T 2cf5_A 84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC 163 (357)
T ss_dssp SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGT
T ss_pred CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhh
Confidence 99999999888877899999999999999997654443333333445679999999999999999999999999999999
Q ss_pred hhhhhhHHHHhhCCCC-CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc
Q 018094 167 AGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245 (361)
Q Consensus 167 ~~~~a~~~l~~~~~~~-~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 245 (361)
++.|||+++++. .++ +|++|||+|+|++|++++|+||.+|++|++++++++++..+.+++|+++++++.+.+.+.+++
T Consensus 164 ~~~ta~~~l~~~-~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~ 242 (357)
T 2cf5_A 164 AGVTVYSPLSHF-GLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELA 242 (357)
T ss_dssp HHHHHHHHHHHT-STTSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHST
T ss_pred hHHHHHHHHHhc-CCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhc
Confidence 999999999865 467 999999999999999999999999999999999888776554489999999988877777777
Q ss_pred CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcc-cChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018094 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLE-LPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
+++|+|||++|+...++.++++++++|+++.+|....... ++.. ++.|++++.|++..+.+++++++++++++++++.
T Consensus 243 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~ 321 (357)
T 2cf5_A 243 DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSI 321 (357)
T ss_dssp TTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHHcCCCCCc
Confidence 8999999999987668999999999999999998655443 5555 7889999999988888899999999999999988
Q ss_pred eEEEecccHHHHHHHHHcCCCcEEEEEEeCCcc
Q 018094 325 IEVIPADYVNTALERLAKADVRYRFVIDVANTM 357 (361)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~ 357 (361)
+++|+++++++||+.+++++..||+|+++++++
T Consensus 322 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~ 354 (357)
T 2cf5_A 322 IEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSN 354 (357)
T ss_dssp EEEEEGGGHHHHHHHHHTTCSSSEEEEETTSCC
T ss_pred eEEEeHHHHHHHHHHHHCCCCceEEEEeCCccc
Confidence 899999999999999999988899999997754
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-62 Score=453.50 Aligned_cols=355 Identities=77% Similarity=1.283 Sum_probs=315.0
Q ss_pred CCCCCCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEE
Q 018094 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTE 80 (361)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~ 80 (361)
|++.|+..++|++++|...+.++.+++.++|.|+|+++||+|||.++|||++|++.+.|.++...+|.++|||++|+|++
T Consensus 5 ~~~~~~~~~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~ 84 (366)
T 1yqd_A 5 MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTE 84 (366)
T ss_dssp ---CHHHHSSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEE
T ss_pred cCCCcchhCCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEE
Confidence 44555555689999999988888999999999999999999999999999999999988765557899999999999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccc
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA 160 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~ 160 (361)
+|+++++|++||||++.+..+.|+.|.+|++|.++.|++..+.+.+....+....|+|+||+.+|+..++++|+++++++
T Consensus 85 vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~ 164 (366)
T 1yqd_A 85 VGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDG 164 (366)
T ss_dssp ECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTT
T ss_pred ECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHH
Confidence 99999999999999888777899999999999999997654443333233445679999999999999999999999999
Q ss_pred ccccchhhhhhhHHHHhhCCCC-CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH
Q 018094 161 TAPLLCAGITVYSPLRFYGLDK-PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 161 aa~l~~~~~~a~~~l~~~~~~~-~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
||++++++.|||++++... ++ +|++|||+|+|++|++++|+|+.+|++|++++++++++..+.+++|+++++++.+.+
T Consensus 165 aa~l~~~~~ta~~al~~~~-~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~ 243 (366)
T 1yqd_A 165 GAPLLCAGITVYSPLKYFG-LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQE 243 (366)
T ss_dssp TGGGGTHHHHHHHHHHHTT-CCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHH
T ss_pred hhhhhhhHHHHHHHHHhcC-cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHH
Confidence 9999999999999998754 67 999999999999999999999999999999999988876665599999999988877
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018094 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 319 (361)
.+.++++++|+|||++|....+..++++++++|+++.+|.......++...++.+++++.|+...+.++++++++++++|
T Consensus 244 ~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g 323 (366)
T 1yqd_A 244 QMQAAAGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKH 323 (366)
T ss_dssp HHHHTTTCEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHT
T ss_pred HHHHhhCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcC
Confidence 78787789999999999876689999999999999999987666667777888999999999888888999999999999
Q ss_pred CCceeeEEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 320 NIRADIEVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 320 ~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
++++.+++|+|+++++||+.+++++..||+|++++++
T Consensus 324 ~l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~~~ 360 (366)
T 1yqd_A 324 NITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNT 360 (366)
T ss_dssp TCCCCEEEECGGGHHHHHHHHHTTCCSSEEEECHHHH
T ss_pred CCCCceEEEcHHHHHHHHHHHHcCCcceEEEEEcccc
Confidence 9998889999999999999999998889999998654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-60 Score=443.46 Aligned_cols=339 Identities=43% Similarity=0.805 Sum_probs=295.8
Q ss_pred ccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCC
Q 018094 12 NAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVG 91 (361)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~G 91 (361)
++.++...+.++.++++++|.|+|+++||||||++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 4 ~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~vG 83 (348)
T 3two_A 4 QSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKIG 83 (348)
T ss_dssp EEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCTT
T ss_pred EEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCCC
Confidence 33444444455679999999999999999999999999999999999988777889999999999999999999999999
Q ss_pred CEEEEccccCCCCCCcccccCCCCCCccccccccc--ccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN--KYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 92 d~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
|||++.+....|+.|.+|++|.++.|.....++.. ....+....|+|+||+.+|+++++++|+++++++||++++++.
T Consensus 84 drV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 163 (348)
T 3two_A 84 DVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGI 163 (348)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHH
T ss_pred CEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhHH
Confidence 99998887789999999999999999832222111 1112334559999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
|||+++++. ++++|++|||+|+|++|++++|+|+.+|++|++++.++++++ +++++|+++++ .+.+.+ ..++|
T Consensus 164 ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v~--~~~~~~---~~~~D 236 (348)
T 3two_A 164 TTYSPLKFS-KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DALSMGVKHFY--TDPKQC---KEELD 236 (348)
T ss_dssp HHHHHHHHT-TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHHHTTCSEEE--SSGGGC---CSCEE
T ss_pred HHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHhcCCCeec--CCHHHH---hcCCC
Confidence 999999876 689999999999999999999999999999999998887764 55899999988 333332 23899
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEecCCC-CCcc-cChHHHh-hCCcEEEecccCCHHHHHHHHHHHHcCCCceeeE
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLE-LPAFSLL-MGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE 326 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~ 326 (361)
+|||++|+...+..++++++++|+++.+|... .... ++...++ .+++++.|+..++.++++++++++++|++++.++
T Consensus 237 ~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~ 316 (348)
T 3two_A 237 FIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPEID 316 (348)
T ss_dssp EEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCCEE
T ss_pred EEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceEE
Confidence 99999999867999999999999999999876 5555 6767777 8999999999999999999999999999999889
Q ss_pred EEecccHHHHHHHHHcCCCcEEEEEEeCCcc
Q 018094 327 VIPADYVNTALERLAKADVRYRFVIDVANTM 357 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~~ 357 (361)
+|+++++++||+.+.+++..||+|++++++.
T Consensus 317 ~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~~ 347 (348)
T 3two_A 317 LILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347 (348)
T ss_dssp EECGGGHHHHHHHHHTTCCCSEEEEEGGGCC
T ss_pred EEEHHHHHHHHHHHHcCCCceEEEEecCCcC
Confidence 9999999999999999999999999997653
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-60 Score=440.74 Aligned_cols=344 Identities=48% Similarity=0.843 Sum_probs=297.8
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
.|+..+|...++.+.+++.++|.|+|+++||||||+++|||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 20 ~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~~ 99 (369)
T 1uuf_A 20 GLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYA 99 (369)
T ss_dssp ---CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCCC
Confidence 45666666655567899999999999999999999999999999999998765556799999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCccccccccccc-CCCcccCCccceEEEeccCceEECCCC-CCcccccccchh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGTITYGGYSDIMVADEHFVVRIPEG-TPLDATAPLLCA 167 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~v~~~~v~~iP~~-~~~~~aa~l~~~ 167 (361)
+||||++.++.+.|+.|.+|++|.++.|++....+.+.. ..|....|+|+||+.+|++.++++|++ +++++||+++++
T Consensus 100 vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~~ 179 (369)
T 1uuf_A 100 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA 179 (369)
T ss_dssp TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGTH
T ss_pred CCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhhh
Confidence 999999998888999999999999999997532221110 012245799999999999999999999 999999999999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCC
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGT 247 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g 247 (361)
+.|||+++++. .+++|++|||+|+|++|++++|+|+.+|++|++++++++++. +++++|+++++++.+.+.+.++.++
T Consensus 180 ~~tA~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~-~a~~lGa~~vi~~~~~~~~~~~~~g 257 (369)
T 1uuf_A 180 GITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGADEVVNSRNADEMAAHLKS 257 (369)
T ss_dssp HHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEEEETTCHHHHHTTTTC
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEEeccccHHHHHHhhcC
Confidence 99999999875 689999999999999999999999999999999998887764 5588999999998887777666679
Q ss_pred ccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeE
Q 018094 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE 326 (361)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~ 326 (361)
+|+|||++|+...+..++++++++|+++.+|...... .++...++.+++++.|+...+.++++++++++++|++++.++
T Consensus 258 ~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~ 337 (369)
T 1uuf_A 258 FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIE 337 (369)
T ss_dssp EEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCCEE
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcceE
Confidence 9999999998767999999999999999999876544 677777888999999998888889999999999999998888
Q ss_pred EEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 327 VIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
+|+++++++||+.+++++..||+|+++++
T Consensus 338 ~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 338 MIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 89999999999999998888999999865
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-60 Score=437.67 Aligned_cols=335 Identities=34% Similarity=0.602 Sum_probs=299.8
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
+|+++++...+ +.++++++|.|+|+++||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus 2 ~MkA~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~ 79 (340)
T 3s2e_A 2 MMKAAVVRAFG--APLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRV 79 (340)
T ss_dssp EEEEEEBCSTT--SCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSC
T ss_pred ceEEEEEecCC--CCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcC
Confidence 57777765433 34889999999999999999999999999999999997764 4689999999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhh
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
++||||++......|+.|.+|++|.++.|.+.... |...+|+|+||+.+|++.++++|+++++++||++++++
T Consensus 80 ~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~ 152 (340)
T 3s2e_A 80 KEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAG 152 (340)
T ss_dssp CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHH
T ss_pred CCCCEEEecCCCCCCCCChHHhCcCcccCcccccc-------CCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchh
Confidence 99999977666679999999999999999986442 44578999999999999999999999999999999999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH---HHHhc
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---MQAAM 245 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~~~~~ 245 (361)
.|||++++. ..+++|++|||+|+|++|++++|+|+.+|++|++++++++++ ++++++|+++++++.+.+. +.+..
T Consensus 153 ~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 153 VTVYKGLKV-TDTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKL-NLARRLGAEVAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp HHHHHHHHT-TTCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEETTTSCHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHcCCCEEEeCCCcCHHHHHHHhC
Confidence 999999954 568999999999999999999999999999999999988776 4568999999999876543 33434
Q ss_pred CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee
Q 018094 246 GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~ 325 (361)
+++|++||++|+...++.++++++++|+++.+|...+...++...++.+++++.|+...+.++++++++++++|++++.+
T Consensus 231 g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~ 310 (340)
T 3s2e_A 231 GGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATV 310 (340)
T ss_dssp SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCE
T ss_pred CCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceE
Confidence 58999999999887799999999999999999987777777888888999999999999999999999999999999988
Q ss_pred EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 326 EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 326 ~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
++++|+++++||+.+++++..||+|+++++
T Consensus 311 ~~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 311 STAKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp EEECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred EEEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 889999999999999999999999999864
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-60 Score=439.08 Aligned_cols=345 Identities=35% Similarity=0.625 Sum_probs=298.5
Q ss_pred cccccccceecccCCCCCcccee--eeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFH--FSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSK 84 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~--~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~ 84 (361)
+|.+|+++.+...+ +.+++++ +|.|+|+++||||||++++||++|++.+.|.++...+|.++|||++|+|+++|++
T Consensus 3 ~p~~mka~~~~~~~--~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~ 80 (360)
T 1piw_A 3 YPEKFEGIAIQSHE--DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPK 80 (360)
T ss_dssp TTTCEEEEEECCSS--STTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTT
T ss_pred CChheEEEEEecCC--CCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCC
Confidence 45567777764432 3588889 9999999999999999999999999999987665567999999999999999999
Q ss_pred CC-CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 85 VS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 85 ~~-~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
++ +|++||||++.+....|++|.+|++|.++.|++....+.+....|....|+|+||+.+|+++++++|+++++++||+
T Consensus 81 v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~ 160 (360)
T 1piw_A 81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAP 160 (360)
T ss_dssp CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGG
T ss_pred CCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhh
Confidence 99 99999999888777899999999999999998751111111111334679999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH-HHHH
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-DEMQ 242 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~ 242 (361)
+++++.|||+++++ .++++|++|||+|+|++|++++|+||.+|++|+++++++++++ +++++|+++++++.+. +...
T Consensus 161 l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~~~lGa~~v~~~~~~~~~~~ 238 (360)
T 1piw_A 161 LLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRE-DAMKMGADHYIATLEEGDWGE 238 (360)
T ss_dssp GGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEEEEGGGTSCHHH
T ss_pred hhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHcCCCEEEcCcCchHHHH
Confidence 99999999999987 6789999999999999999999999999999999998887764 5588999999988765 6666
Q ss_pred HhcCCccEEEEcCCC--cccHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018094 243 AAMGTMDGIIDTVSA--VHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319 (361)
Q Consensus 243 ~~~~g~d~vid~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 319 (361)
++.+++|+|||++|+ ...++.++++++++|+++.+|.... . .++...++.|++++.|+...+.++++++++++++|
T Consensus 239 ~~~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g 317 (360)
T 1piw_A 239 KYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEK 317 (360)
T ss_dssp HSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred HhhcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhC
Confidence 666789999999998 5568899999999999999998665 4 45555678899999999888889999999999999
Q ss_pred CCceeeEEEeccc--HHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 320 NIRADIEVIPADY--VNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 320 ~l~~~~~~~~l~~--~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
++++.+++|++++ +++||+.+++++..||+|+++++.
T Consensus 318 ~l~~~i~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~~ 356 (360)
T 1piw_A 318 DIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYDK 356 (360)
T ss_dssp TCCCCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECCHH
T ss_pred CCcceEEEEeccHhHHHHHHHHHHCCCCceEEEEecCcc
Confidence 9998789999999 999999999988889999998764
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-58 Score=425.80 Aligned_cols=334 Identities=32% Similarity=0.596 Sum_probs=293.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+ +.++++++|.|+|+++||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~ 78 (339)
T 1rjw_A 1 MKAAVVEQFK--EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK 78 (339)
T ss_dssp CEEEEBSSTT--SCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CeEEEEcCCC--CCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCC
Confidence 4555553322 25888999999999999999999999999999999887652 36799999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+....|+.|.+|++|.++.|++.... |....|+|+||+.+|++.++++|+++++++||++++++.
T Consensus 79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 151 (339)
T 1rjw_A 79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGV 151 (339)
T ss_dssp TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHH
T ss_pred CCCEEEEecCCCCCCCCchhhCcCcccCCCccee-------ecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHH
Confidence 9999998777668999999999999999976432 334679999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG 246 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 246 (361)
|||++++.. .+++|++|||+|+|++|++++|+|+.+|++|+++++++++.. .++++|++.++++.+.+ .+.+.++
T Consensus 152 ta~~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~~~d~~~~~~~~~~~~~~~ 229 (339)
T 1rjw_A 152 TTYKALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKELGADLVVNPLKEDAAKFMKEKVG 229 (339)
T ss_dssp HHHHHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHTTCSEEECTTTSCHHHHHHHHHS
T ss_pred HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHCCCCEEecCCCccHHHHHHHHhC
Confidence 999999877 689999999999988999999999999999999998877764 45889999988876543 3444457
Q ss_pred CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceeeE
Q 018094 247 TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADIE 326 (361)
Q Consensus 247 g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~~ 326 (361)
++|++||++|...++..++++++++|+++.+|...+...++...++.+++++.|+...+.++++++++++++|++++.++
T Consensus 230 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~ 309 (339)
T 1rjw_A 230 GVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIE 309 (339)
T ss_dssp SEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEE
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCccEE
Confidence 89999999998666899999999999999999876666677777888999999998888899999999999999998889
Q ss_pred EEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 327 VIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 327 ~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
+|+++++++||+.+++++..||+|+++++
T Consensus 310 ~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 310 VQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp EEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 99999999999999998888999999864
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-58 Score=429.64 Aligned_cols=346 Identities=21% Similarity=0.319 Sum_probs=291.1
Q ss_pred CCCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCC
Q 018094 4 APEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~ 83 (361)
+..++.+|+++++...+ +.++++++|.|+|+++||||||++++||++|++.+.|.++...+|.++|||++|+|+++|+
T Consensus 2 ~~~~~~tmkA~v~~~~~--~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~ 79 (378)
T 3uko_A 2 TQGQVITCKAAVAYEPN--KPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 79 (378)
T ss_dssp CTTSCEEEEEEEBCSTT--SCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECT
T ss_pred CcccceeeEEEEEecCC--CccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCC
Confidence 34567777777764432 3489999999999999999999999999999999999877678899999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCccccccc-ccc--------------cCCCcccCCccceEEEeccCc
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTY-ANK--------------YHDGTITYGGYSDIMVADEHF 148 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~-~~~--------------~~~~~~~~g~~~~~~~v~~~~ 148 (361)
++++|++||||++.+. ..|+.|.+|++|.++.|++..... .|. ........|+|+||+.+|++.
T Consensus 80 ~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~ 158 (378)
T 3uko_A 80 GVTEVQAGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVS 158 (378)
T ss_dssp TCCSCCTTCEEEECSS-CCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred CCCcCCCCCEEEEecC-CCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhh
Confidence 9999999999976664 589999999999999999864311 010 001122347999999999999
Q ss_pred eEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHc
Q 018094 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL 227 (361)
Q Consensus 149 v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~ 227 (361)
++++|+++++++||.+++++.|||+++.+...+++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++
T Consensus 159 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~-~~a~~l 237 (378)
T 3uko_A 159 VAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKY-ETAKKF 237 (378)
T ss_dssp EEECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHH-HHHHTT
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHc
Confidence 999999999999999999999999999888889999999999999999999999999999 898888887775 566999
Q ss_pred CCcEEecCC--CH---HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC--CcccChHHHhhCCcEE
Q 018094 228 GADSFLVSR--DQ---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIV 298 (361)
Q Consensus 228 g~~~v~~~~--~~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i 298 (361)
|+++++++. +. +.++++++ ++|+|||++|+..++..++++++++ |+++.+|.... ...++...++. ++++
T Consensus 238 Ga~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~-~~~i 316 (378)
T 3uko_A 238 GVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 316 (378)
T ss_dssp TCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHT-TCEE
T ss_pred CCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhc-CcEE
Confidence 999999876 32 34555554 8999999999977789999999996 99999998653 34556555554 8999
Q ss_pred EecccC---CHHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 299 GGSMIG---GMKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 299 ~g~~~~---~~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
.|+... ..+++++++++++++++++. + ++|+|+++++||+.+++++.. |+|+++++
T Consensus 317 ~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~ 378 (378)
T 3uko_A 317 KGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK 378 (378)
T ss_dssp EECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred EEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence 998654 45789999999999988753 4 899999999999999988865 99999864
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-58 Score=427.57 Aligned_cols=334 Identities=27% Similarity=0.495 Sum_probs=300.8
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|++.++.. .+++.+++.++|+|+|+|+||||||.++|||++|+++++|.++. .+|.++|||++|+|+++|++|++|++
T Consensus 1 MKA~v~~~-~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~-~~p~i~GhE~aG~V~~vG~~V~~~~~ 78 (348)
T 4eez_A 1 MKAAVVRH-NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVKEIGADVSSLQV 78 (348)
T ss_dssp CEEEEECS-SCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC-CTTCBCCSEEEEEEEEECTTCCSCCT
T ss_pred CeEEEEEc-CCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC-CCCcccceeEEEEEEEECceeeeccc
Confidence 56666543 35677899999999999999999999999999999999998764 68999999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGIT 170 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~ 170 (361)
||||++.+....|+.|.+|..+.++.|...... +...+|+|+||+.++++.++++|+++++++|+++++++.|
T Consensus 79 GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~t 151 (348)
T 4eez_A 79 GDRVSVAWFFEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVT 151 (348)
T ss_dssp TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHH
T ss_pred CCeEeecccccccCccccccCCccccccccccc-------ccccCCcceeeccccccceeecCCCCCHHHHhhcccceee
Confidence 999999999999999999999999999886543 3457899999999999999999999999999999999999
Q ss_pred hhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC
Q 018094 171 VYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG 246 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 246 (361)
||++++.. .+++|++|||+|+|++|.+++|+|+.+ |++|++++++++++ ++++++|+++++++++.+ .+.++++
T Consensus 152 a~~~l~~~-~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~-~~~~~~Ga~~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 152 TYKAIKVS-GVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKL-NLAKKIGADVTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp HHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHH-HHHHHTTCSEEEEC-CCCHHHHHHHHTT
T ss_pred EEeeeccc-CCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHh-hhhhhcCCeEEEeCCCCCHHHHhhhhcC
Confidence 99999755 479999999999999999999999976 67999999988775 566899999999987754 4555665
Q ss_pred --CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCcee
Q 018094 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
++|+++|++++..++..++++++++|+++.+|.......++...++.+++++.|+..++.++++++++++++|++++.
T Consensus 230 g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~ 309 (348)
T 4eez_A 230 GLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPI 309 (348)
T ss_dssp SSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCC
T ss_pred CCCceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEE
Confidence 689999999998889999999999999999998877788888899999999999999999999999999999999988
Q ss_pred eEEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 325 IEVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 325 ~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
+++|+|+++++||+.+++++..||+||+|++
T Consensus 310 ~~~~~l~~~~~A~~~l~~g~~~GKvVl~~sk 340 (348)
T 4eez_A 310 VATRKLEEINDIIDEMKAGKIEGRMVIDFTK 340 (348)
T ss_dssp EEEECGGGHHHHHHHHHTTCCSSEEEEECC-
T ss_pred EEEEeHHHHHHHHHHHHCCCCccEEEEEccc
Confidence 8999999999999999999999999999974
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-58 Score=427.53 Aligned_cols=332 Identities=27% Similarity=0.442 Sum_probs=287.6
Q ss_pred ccccccceecccCCCCCccceeeeccC-CCCCeEEEEEeeeccccchhhhhhCCCC---CCCCCCcccccccEEEEEeCC
Q 018094 8 EHPKNAFGWAARDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHLIKNEWG---NAIYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~-~~~~~vlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~ 83 (361)
+.+|+++.+...+ +.++++++|.|+ |+++||+|||+++|||++|++.+.|.++ ...+|.++|||++|+|+++|+
T Consensus 13 ~~~mka~~~~~~g--~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~ 90 (359)
T 1h2b_A 13 VERLKAARLHEYN--KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAE 90 (359)
T ss_dssp ----CEEEESSTT--SCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECT
T ss_pred hhhceEEEEecCC--CCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECC
Confidence 4457776664332 358889999999 9999999999999999999999998764 346799999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccccc-
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA- 162 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa- 162 (361)
++++|++||||+.. ....|+.|.+|++|.++.|++.... |....|+|+||+.+|+++++++|+++++++||
T Consensus 91 ~v~~~~vGdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~ 162 (359)
T 1h2b_A 91 GVEGLEKGDPVILH-PAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDISREKLVE 162 (359)
T ss_dssp TCCSCCTTCEEEEC-SCBCCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCHHHHHH
T ss_pred CCCCCCCCCEEEeC-CCCCCCCChhhhCcCcccCCCcccc-------ccCCCCcccceEEechHhEEECCCCCCHHHHhh
Confidence 99999999999654 4458999999999999999876422 33567999999999999999999999999998
Q ss_pred --ccchhhhhhhHHHHhh-CCCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCH
Q 018094 163 --PLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238 (361)
Q Consensus 163 --~l~~~~~~a~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~ 238 (361)
++++++.|||+++.+. .++++|++|||+|+|++|++++|+||.+ |++|++++++++++ ++++++|++++++++++
T Consensus 163 ~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~ 241 (359)
T 1h2b_A 163 MAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAERLGADHVVDARRD 241 (359)
T ss_dssp TGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHHHTTCSEEEETTSC
T ss_pred ccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHHHhCCCEEEeccch
Confidence 8999999999999885 7789999999999999999999999999 99999999887765 45589999999998765
Q ss_pred --HHHHHhcC--CccEEEEcCCCcc--cHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHH
Q 018094 239 --DEMQAAMG--TMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312 (361)
Q Consensus 239 --~~~~~~~~--g~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 312 (361)
+.+.++++ ++|++||++|+.. ++..++++ ++|+++.+|...+. .++...++.+++++.|+...+.++++++
T Consensus 242 ~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 318 (359)
T 1h2b_A 242 PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHEL 318 (359)
T ss_dssp HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHH
Confidence 45556664 7999999999975 57788877 99999999986655 6777778889999999988888999999
Q ss_pred HHHHHcCCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 313 IDFAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 313 ~~~l~~~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++++++|++++.+++|+++++++||+.+++++..||+|+++
T Consensus 319 ~~l~~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 319 VTLALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp HHHHHTTSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred HHHHHcCCCcceEEEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 99999999988779999999999999999998889999974
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-58 Score=427.18 Aligned_cols=336 Identities=23% Similarity=0.334 Sum_probs=287.4
Q ss_pred CCCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCC
Q 018094 4 APEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~ 83 (361)
.+.+|.+|+++++. .++.++++++|.|+|+++||+|||++++||++|++.+.|.++ ..+|.++|||++|+|+++|+
T Consensus 17 ~~~~p~~mkA~v~~---~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~ 92 (370)
T 4ej6_A 17 NLYFQSMMKAVRLE---SVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGS 92 (370)
T ss_dssp ----CCEEEEEEEE---ETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECT
T ss_pred ccccchheEEEEEe---cCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECC
Confidence 35577888888774 346799999999999999999999999999999999998764 46799999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
++++|++||||++.+. ..|+.|.+|++|.++.|.+.... |....|+|+||+.+|++.++++|+++++++||
T Consensus 93 ~v~~~~vGdrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa- 163 (370)
T 4ej6_A 93 AVRDIAPGARITGDPN-ISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA- 163 (370)
T ss_dssp TCCSSCTTCEEEECCE-ECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-
T ss_pred CCCCCCCCCEEEECCC-CCCCCChHHhCcCcccCCCcccc-------CCCCCCcceEEEEEchhhEEECCCCCCHHHHh-
Confidence 9999999999988776 59999999999999999986432 34568999999999999999999999999997
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH-
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEM- 241 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~- 241 (361)
+..++.+||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|+++++++++.+..
T Consensus 164 l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~ 241 (370)
T 4ej6_A 164 FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKR-RLAEEVGATATVDPSAGDVVE 241 (370)
T ss_dssp GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHTCSEEECTTSSCHHH
T ss_pred hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCCEEECCCCcCHHH
Confidence 777899999999 45668999999999999999999999999999 787777776664 67799999999998765443
Q ss_pred --HH---hc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccCCHHHHHHHH
Q 018094 242 --QA---AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGGMKETQEMI 313 (361)
Q Consensus 242 --~~---~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 313 (361)
.+ ++ +++|+|||++|+..++..++++++++|+++.+|.... ...++...++.|++++.|+.... +++++++
T Consensus 242 ~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~~~ 320 (370)
T 4ej6_A 242 AIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP-FVHRRAA 320 (370)
T ss_dssp HHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCT-TCHHHHH
T ss_pred HHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccCh-HHHHHHH
Confidence 33 33 3799999999987779999999999999999998665 56788888999999999998755 5699999
Q ss_pred HHHHcCCCce--ee-EEEecccHHHHHHHHHcCC-CcEEEEEEeCC
Q 018094 314 DFAAKHNIRA--DI-EVIPADYVNTALERLAKAD-VRYRFVIDVAN 355 (361)
Q Consensus 314 ~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~~ 355 (361)
+++++|++++ .+ ++|+|+++++||+.+.+++ ..+|+++++++
T Consensus 321 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~ 366 (370)
T 4ej6_A 321 DLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER 366 (370)
T ss_dssp HHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred HHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence 9999999864 35 8999999999999998776 45899998865
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-57 Score=422.44 Aligned_cols=330 Identities=27% Similarity=0.355 Sum_probs=270.9
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC--CCCCCCcccccccEEEEEeCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG--NAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~--~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
+|+++.+...+ +.++++++|.|+|+++||+|||+++|||++|++.+.|.++ ...+|.++|||++|+|+++|++ ++
T Consensus 3 ~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~ 79 (344)
T 2h6e_A 3 KSKAALLKKFS--EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AK 79 (344)
T ss_dssp EEEBCEECSCC--C-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred eeEEEEEecCC--CCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CC
Confidence 57777764432 3588899999999999999999999999999999998765 3467999999999999999999 99
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEec-cCceEECCCCCCcccccccch
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~v~~iP~~~~~~~aa~l~~ 166 (361)
|++||||+.. ....|++|.+|++|.+++|++.... |....|+|+||+.+| +++++++ +++++++||++++
T Consensus 80 ~~~GdrV~~~-~~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~ 150 (344)
T 2h6e_A 80 VKKGDNVVVY-ATWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLAD 150 (344)
T ss_dssp CCTTCEEEEC-SCBCCSCSTTGGGTCGGGCTTCBCB-------TTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGT
T ss_pred CCCCCEEEEC-CCCCCCCChhhhCCCcccCCCcccc-------ccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhh
Confidence 9999999554 4458999999999999999875321 334679999999999 9999999 9999999999999
Q ss_pred hhhhhhHHHHhh----CCCCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCcEEecCCC-HH
Q 018094 167 AGITVYSPLRFY----GLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSFLVSRD-QD 239 (361)
Q Consensus 167 ~~~~a~~~l~~~----~~~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~~ 239 (361)
++.|||++++.. +++ +|++|||+|+|++|++++|+||.+ |++|++++++++++ ++++++|+++++++.+ ++
T Consensus 151 ~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~ 228 (344)
T 2h6e_A 151 AGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHR-DFALELGADYVSEMKDAES 228 (344)
T ss_dssp HHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHHHTCSEEECHHHHHH
T ss_pred hhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HHHHHhCCCEEeccccchH
Confidence 999999999876 368 999999999999999999999999 99999998887765 5558999999998776 66
Q ss_pred HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHH
Q 018094 240 EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAA 317 (361)
Q Consensus 240 ~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~ 317 (361)
.+.++++ ++|+|||++|+..++..++++++++|+++.+|.......++...++.|++++.|+...+.+++++++++++
T Consensus 229 ~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~ 308 (344)
T 2h6e_A 229 LINKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSE 308 (344)
T ss_dssp HHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHH
Confidence 6666663 79999999999866999999999999999999876666777778888999999998888899999999999
Q ss_pred cCCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 318 KHNIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 318 ~~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+|++++.+++|+|+++++||+.+++++..||+|+++
T Consensus 309 ~g~i~~~i~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 309 SGKIKPYIIKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp TTSSCCCEEEECC----------------CEEEECC
T ss_pred cCCCCcceEEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 999987779999999999999999988889999864
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-57 Score=421.33 Aligned_cols=334 Identities=26% Similarity=0.377 Sum_probs=290.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC--CCCCCcccccccEEEEEeCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN--AIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~--~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
|+++.+...+ +.++++++|.|+|+++||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus 1 MkA~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 78 (345)
T 3jv7_A 1 MKAVQYTEIG--SEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGF 78 (345)
T ss_dssp CEEEEECSTT--SCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSC
T ss_pred CeEEEEcCCC--CceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCC
Confidence 5666664433 23889999999999999999999999999999999987542 4678999999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCc-ccccccccccCCCcccCCccceEEEec-cCceEECCCCCCcccccccch
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCP-KVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~v~~iP~~~~~~~aa~l~~ 166 (361)
++||||++.+.. .|+.|.+|++|.++.|. +..++. ...+....|+|+||+.+| +..++++|+ +++++||++++
T Consensus 79 ~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~~~---~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~ 153 (345)
T 3jv7_A 79 GVGDAVAVYGPW-GCGACHACARGRENYCTRAADLGI---TPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTD 153 (345)
T ss_dssp CTTCEEEECCSC-CCSSSHHHHTTCGGGCSSHHHHTC---CCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGT
T ss_pred CCCCEEEEecCC-CCCCChHHHCcCcCcCcccccccc---ccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhh
Confidence 999999887765 99999999999999994 333321 112445689999999999 999999999 99999999999
Q ss_pred hhhhhhHHHHh-hCCCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCC--HHHHH
Q 018094 167 AGITVYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQ 242 (361)
Q Consensus 167 ~~~~a~~~l~~-~~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~ 242 (361)
++.|||+++.+ ...+++|++|||+|+|++|++++|+||.+ +++|++++++++++ ++++++|+++++++++ .+.+.
T Consensus 154 ~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~~lGa~~~i~~~~~~~~~v~ 232 (345)
T 3jv7_A 154 AGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAREVGADAAVKSGAGAADAIR 232 (345)
T ss_dssp TTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHHHTTCSEEEECSTTHHHHHH
T ss_pred hHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHcCCCEEEcCCCcHHHHHH
Confidence 99999999988 45689999999999999999999999998 67999998888775 5669999999998765 23455
Q ss_pred HhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018094 243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319 (361)
Q Consensus 243 ~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 319 (361)
++++ ++|++||++|+..++..++++++++|+++.+|...+ ...++. .++.+++++.++...+.++++++++++++|
T Consensus 233 ~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g 311 (345)
T 3jv7_A 233 ELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAG 311 (345)
T ss_dssp HHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTT
T ss_pred HHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcC
Confidence 5554 799999999998669999999999999999998765 556664 678899999999999999999999999999
Q ss_pred CCceeeEEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 320 NIRADIEVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 320 ~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++++..++|+++++++||+.+.+++..||+|+++
T Consensus 312 ~l~~~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 312 RLDIHTETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp CCCCCEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred CCceEEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 9998779999999999999999999999999864
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-57 Score=421.51 Aligned_cols=341 Identities=22% Similarity=0.355 Sum_probs=283.6
Q ss_pred ccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018094 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
+.+|++.++.+.+..+.++++++|.|+|+++||+|||++++||++|++.+.|. +...+|.++|||++|+|+++|+++++
T Consensus 4 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~ 82 (376)
T 1e3i_A 4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTN 82 (376)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred CCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCcc
Confidence 34444445555433345888999999999999999999999999999998886 44468999999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccc----ccc-ccccCC-------------CcccCCccceEEEeccCce
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVI----MTY-ANKYHD-------------GTITYGGYSDIMVADEHFV 149 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~----~~~-~~~~~~-------------~~~~~g~~~~~~~v~~~~v 149 (361)
|++||||++.+. ..|++|.+|++|.++.|++.. +.. .+.... +....|+|+||+.+|++.+
T Consensus 83 ~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 161 (376)
T 1e3i_A 83 FKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL 161 (376)
T ss_dssp CCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred CCCCCEEEECCc-CCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccccE
Confidence 999999987765 489999999999999998753 100 011101 1113599999999999999
Q ss_pred EECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcC
Q 018094 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG 228 (361)
Q Consensus 150 ~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g 228 (361)
+++|+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++|
T Consensus 162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lG 240 (376)
T 1e3i_A 162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKALG 240 (376)
T ss_dssp EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTT
T ss_pred EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHhC
Confidence 99999999999999999999999999888889999999999999999999999999999 788888887775 5558999
Q ss_pred CcEEecCCC--H---HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCCCcccChHHHhhCCcEEEec
Q 018094 229 ADSFLVSRD--Q---DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPAFSLLMGRKIVGGS 301 (361)
Q Consensus 229 ~~~v~~~~~--~---~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~ 301 (361)
+++++++.+ + +.+.++++ ++|+|||++|+..++..++++++++ |+++.+|.......++...++.++ ++.|+
T Consensus 241 a~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~i~g~ 319 (376)
T 1e3i_A 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-SINGT 319 (376)
T ss_dssp CSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-EEEEC
T ss_pred CcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-eEEEE
Confidence 999998763 2 34555544 7999999999876689999999999 999999985555567777777788 99998
Q ss_pred ccC---CHHHHHHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 302 MIG---GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 302 ~~~---~~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
... ..++++++++++++|++++ .+ ++|+|+++++||+.+++++ .+|+|+++
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~ 376 (376)
T 1e3i_A 320 FFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF 376 (376)
T ss_dssp SGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred ecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence 653 3568999999999999874 44 8999999999999998877 47999874
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-57 Score=420.11 Aligned_cols=338 Identities=29% Similarity=0.514 Sum_probs=294.8
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
+|.+|+++.+...+ +.++++++|.|+|+++||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 2 ~p~~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v 79 (347)
T 2hcy_A 2 IPETQKGVIFYESH--GKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENV 79 (347)
T ss_dssp CCSEEEEEEESSTT--CCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTC
T ss_pred CCcccEEEEEeCCC--CCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCC
Confidence 56678887774432 25888999999999999999999999999999999886652 3678999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
++|++||||++.+....|+.|.+|++|.++.|++.... |....|+|+||+.+|++.++++|+++++++||+++
T Consensus 80 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~ 152 (347)
T 2hcy_A 80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPIL 152 (347)
T ss_dssp CSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB-------TTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGG
T ss_pred CCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccc-------ccCCCCcceeEEEeccccEEECCCCCCHHHHHHHh
Confidence 99999999998776667999999999999999976432 33467999999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-H---HH
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DE 240 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~---~~ 240 (361)
+++.|||+++.+. .+++|++|||+|+ |++|++++|+++..|++|+++++++++. +.++++|++.++|..+ + +.
T Consensus 153 ~~~~ta~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~g~~~~~d~~~~~~~~~~ 230 (347)
T 2hcy_A 153 CAGITVYKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIGGEVFIDFTKEKDIVGA 230 (347)
T ss_dssp THHHHHHHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHTTCCEEEETTTCSCHHHH
T ss_pred hhHHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHcCCceEEecCccHhHHHH
Confidence 9999999999876 6899999999998 9999999999999999999999887776 5558899988888653 2 23
Q ss_pred HHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHc
Q 018094 241 MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318 (361)
Q Consensus 241 ~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~ 318 (361)
+.+.++ ++|++||++|....+..++++|+++|+++.+|...+ ...++...++.|++++.|+...+.++++++++++++
T Consensus 231 ~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~ 310 (347)
T 2hcy_A 231 VLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFAR 310 (347)
T ss_dssp HHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHh
Confidence 444443 799999999986668999999999999999998663 356777778889999999988888999999999999
Q ss_pred CCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 319 HNIRADIEVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 319 ~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
|++++.+++|+++++++||+.+++++..||+|+++++
T Consensus 311 g~l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 347 (347)
T 2hcy_A 311 GLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK 347 (347)
T ss_dssp TSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred CCCccceEEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence 9999878999999999999999998888999998763
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-56 Score=417.96 Aligned_cols=344 Identities=25% Similarity=0.345 Sum_probs=284.5
Q ss_pred CCCCCCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEE
Q 018094 1 MGQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTE 80 (361)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~ 80 (361)
|++++ .|.+|+++.+. +..+.++++++|.|+|+++||||||++++||++|++.+.|.++ ..+|.++|||++|+|++
T Consensus 1 ~~~~~-~p~~mka~~~~--~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~ 76 (373)
T 1p0f_A 1 MCTAG-KDITCKAAVAW--EPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVES 76 (373)
T ss_dssp -CCTT-SCEEEEEEEBS--STTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEE
T ss_pred CcccC-CcceeEEEEEE--cCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEE
Confidence 66443 45556665553 3333588899999999999999999999999999999988765 56799999999999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccc-cccC-------------CCcccCCccceEEEecc
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADE 146 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~g~~~~~~~v~~ 146 (361)
+|+++++|++||||++.+. ..|++|.+|++|.++.|++...... +... .+....|+|+||+.+|+
T Consensus 77 vG~~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~ 155 (373)
T 1p0f_A 77 IGAGVTCVKPGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVAD 155 (373)
T ss_dssp ECTTCCSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEET
T ss_pred ECCCCCccCCCCEEEECCC-CCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEch
Confidence 9999999999999987765 4899999999999999998642110 1100 01123599999999999
Q ss_pred CceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHH
Q 018094 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIE 225 (361)
Q Consensus 147 ~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~ 225 (361)
++++++|++++++ ||++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++
T Consensus 156 ~~~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~ 233 (373)
T 1p0f_A 156 IAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAI 233 (373)
T ss_dssp TSEEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH
T ss_pred hhEEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHH
Confidence 9999999999999 999999999999999877889999999999999999999999999999 788888887765 5568
Q ss_pred HcCCcEEecCCC-----HHHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC--CcccChHHHhhCCc
Q 018094 226 RLGADSFLVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRK 296 (361)
Q Consensus 226 ~~g~~~v~~~~~-----~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~ 296 (361)
++|+++++++.+ .+.+.++++ ++|+|||++|+..++..++++++++ |+++.+|.... ...++...++.++
T Consensus 234 ~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~- 312 (373)
T 1p0f_A 234 ELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR- 312 (373)
T ss_dssp HTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-
T ss_pred HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-
Confidence 999999998763 234555554 7999999999876689999999999 99999997653 3566666777788
Q ss_pred EEEecccC--CHHHHHHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 297 IVGGSMIG--GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 297 ~i~g~~~~--~~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++.|+... ..++++++++++++|++++ .+ ++|+|+++++||+.+++++. +|+|+++
T Consensus 313 ~i~g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 1p0f_A 313 SLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY 373 (373)
T ss_dssp EEEECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred eEEeeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 99998643 3468999999999999874 34 89999999999999988774 7999874
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-56 Score=418.28 Aligned_cols=340 Identities=21% Similarity=0.314 Sum_probs=283.9
Q ss_pred ccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018094 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|.+|+++.+ .+..+.++++++|.|+|+++||+|||+++|||++|++.+.|.++...+|.++|||++|+|+++|++|++
T Consensus 4 p~~mkA~~~--~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~ 81 (373)
T 2fzw_A 4 VIKCKAAVA--WEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK 81 (373)
T ss_dssp CEEEEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred ccceEEEEE--ecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence 445555554 333345888999999999999999999999999999999987665578999999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccc-cccC-------------CCcccCCccceEEEeccCceEECC
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADEHFVVRIP 153 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~g~~~~~~~v~~~~v~~iP 153 (361)
|++||||++.+. ..|+.|.+|++|.++.|++...... +... .+....|+|+||+.+|++.++++|
T Consensus 82 ~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 160 (373)
T 2fzw_A 82 LKAGDTVIPLYI-PQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID 160 (373)
T ss_dssp CCTTCEEEECSS-CCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEECCC-CCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECC
Confidence 999999987765 4899999999999999997532110 1000 111235999999999999999999
Q ss_pred CCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEE
Q 018094 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF 232 (361)
Q Consensus 154 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v 232 (361)
+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++++
T Consensus 161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~v 239 (373)
T 2fzw_A 161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATEC 239 (373)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSEE
T ss_pred CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHcCCceE
Confidence 9999999999999999999999877889999999999999999999999999999 788888887765 55689999999
Q ss_pred ecCCC-----HHHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC--CcccChHHHhhCCcEEEeccc
Q 018094 233 LVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMI 303 (361)
Q Consensus 233 ~~~~~-----~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~ 303 (361)
+++.+ .+.+.++++ ++|++||++|+..++..++++++++ |+++.+|.... ...++...++.++ ++.|+..
T Consensus 240 i~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 318 (373)
T 2fzw_A 240 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAF 318 (373)
T ss_dssp ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred eccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEecc
Confidence 88753 234555554 7999999999876689999999999 99999997653 3466667777788 9999865
Q ss_pred C---CHHHHHHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 304 G---GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 304 ~---~~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
. ..++++++++++++|++++ .+ ++|+|+++++||+.+++++. +|+|+++
T Consensus 319 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 2fzw_A 319 GGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI 373 (373)
T ss_dssp GGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred CCCCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 4 2568999999999999874 44 89999999999999988875 7999874
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-56 Score=415.68 Aligned_cols=340 Identities=24% Similarity=0.353 Sum_probs=283.5
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhh-hhhCCCCCCCCCCcccccccEEEEEeCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLH-LIKNEWGNAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~-~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
.|.+|+++.+ .+..+.++++++|.|+|+++||+|||.+++||++|++ .+.|.++ ..+|.++|||++|+|+++|+++
T Consensus 5 ~~~~mka~~~--~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V 81 (374)
T 1cdo_A 5 KVIKCKAAVA--WEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGV 81 (374)
T ss_dssp SCEEEEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTC
T ss_pred CcceeEEEEE--ecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCC
Confidence 3445555554 3333358889999999999999999999999999999 8888665 5679999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccc-cccCCC-------------cccCCccceEEEeccCceEE
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYHDG-------------TITYGGYSDIMVADEHFVVR 151 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~g~~~~~~~v~~~~v~~ 151 (361)
++|++||||++.+. ..|+.|.+|++|.++.|++...... +....+ ....|+|+||+.+|++++++
T Consensus 82 ~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 160 (374)
T 1cdo_A 82 TEFQPGEKVIPLFI-SQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK 160 (374)
T ss_dssp CSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred ccCCCCCEEEeCCC-CCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEE
Confidence 99999999987765 4899999999999999997643110 110011 11359999999999999999
Q ss_pred CCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCc
Q 018094 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD 230 (361)
Q Consensus 152 iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~ 230 (361)
+|+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++|++
T Consensus 161 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~ 239 (374)
T 1cdo_A 161 IDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGAT 239 (374)
T ss_dssp CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCC
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHhCCc
Confidence 999999999999999999999999877889999999999999999999999999999 788888887765 456899999
Q ss_pred EEecCCC-----HHHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC-CcccChHHHhhCCcEEEecc
Q 018094 231 SFLVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK-PLELPAFSLLMGRKIVGGSM 302 (361)
Q Consensus 231 ~v~~~~~-----~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~ 302 (361)
+++++.+ .+.+.++++ ++|++||++|...++..++++++++ |+++.+|.... ...++...++.++ ++.|+.
T Consensus 240 ~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~g~~ 318 (374)
T 1cdo_A 240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWKGSM 318 (374)
T ss_dssp EEECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEEECS
T ss_pred eEEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEEEEe
Confidence 9988763 234445544 7999999999876689999999999 99999998654 4567777777788 999986
Q ss_pred cC---CHHHHHHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 303 IG---GMKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 303 ~~---~~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.. ..++++++++++++|++++ .+ ++|+|+++++||+.+++++. +|+|+++
T Consensus 319 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 374 (374)
T 1cdo_A 319 FGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL 374 (374)
T ss_dssp GGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred cCCCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence 54 2567999999999999874 44 89999999999999998875 7999875
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-56 Score=418.76 Aligned_cols=336 Identities=23% Similarity=0.338 Sum_probs=283.2
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++.+ .+..+.++++++|.|+|+++||+|||+++|||++|++.+.|.++ ..+|.++|||++|+|+++|+++++|++
T Consensus 7 mka~~~--~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~~ 83 (371)
T 1f8f_A 7 IIAAVT--PCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQV 83 (371)
T ss_dssp EEEEEB--CSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred ceEEEE--cCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCCC
Confidence 555554 33333588899999999999999999999999999999998765 467999999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccc-ccc-----cc----CCC------cccCCccceEEEeccCceEECCC
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMT-YAN-----KY----HDG------TITYGGYSDIMVADEHFVVRIPE 154 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~-~~~-----~~----~~~------~~~~g~~~~~~~v~~~~v~~iP~ 154 (361)
||||++.+ ..|++|.+|++|.++.|++.... +.+ .. ..| ....|+|+||+.+|+++++++|+
T Consensus 84 GdrV~~~~--~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~ 161 (371)
T 1f8f_A 84 GDHVVLSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK 161 (371)
T ss_dssp TCEEEECC--CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred CCEEEecC--CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEECCC
Confidence 99998877 68999999999999999986421 100 00 011 12469999999999999999999
Q ss_pred CCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEe
Q 018094 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL 233 (361)
Q Consensus 155 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~ 233 (361)
++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++|+++++
T Consensus 162 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi 240 (371)
T 1f8f_A 162 DVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRL-ELAKQLGATHVI 240 (371)
T ss_dssp TSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHHHTCSEEE
T ss_pred CCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHHHcCCCEEe
Confidence 999999999999999999999777889999999999999999999999999999 688888877665 556899999999
Q ss_pred cCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccCC--
Q 018094 234 VSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG-- 305 (361)
Q Consensus 234 ~~~~~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~-- 305 (361)
++.+.+ .+.+.++ ++|+|||++|...++..++++++++|+++.+|.... ...++...++.|++++.|+....
T Consensus 241 ~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 320 (371)
T 1f8f_A 241 NSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS 320 (371)
T ss_dssp ETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred cCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCCCc
Confidence 886643 4445554 799999999987668999999999999999998653 35677777888999999986542
Q ss_pred -HHHHHHHHHHHHcCCCcee--e-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 306 -MKETQEMIDFAAKHNIRAD--I-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 306 -~~~~~~~~~~l~~~~l~~~--~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
.++++++++++++|++++. + + |+|+++++||+.+++++. +|+|+++.
T Consensus 321 ~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~ 371 (371)
T 1f8f_A 321 PKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA 371 (371)
T ss_dssp HHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred hHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence 4679999999999999863 4 6 999999999999998875 79999863
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-57 Score=416.26 Aligned_cols=333 Identities=23% Similarity=0.318 Sum_probs=290.8
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+.+..++++++|.|+|+++||||||++++||++|++...|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA 80 (343)
T ss_dssp CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence 56666655444455888999999999999999999999999999999987653 36789999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+ ...|+.|.+|++|.++.|++.... |....|+|+||+.+|++.++++|+++++++|+++++++.
T Consensus 81 vGdrV~~~~-~~~cg~c~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 152 (343)
T 2eih_A 81 PGDEVVINP-GLSCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFL 152 (343)
T ss_dssp TTCEEEECC-EECCSCSHHHHTTCGGGCTTCEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred CCCEEEECC-CCCcccchhhccCccccccccccc-------CcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHH
Confidence 999999888 458999999999999999986432 334579999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
|||+++....++++|++|||+|+ |++|++++|+++..|++|+++++++++... ++++|++.++++.+.+ .+.+.+
T Consensus 153 ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~~~~ga~~~~d~~~~~~~~~~~~~~ 231 (343)
T 2eih_A 153 TAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRR-AKALGADETVNYTHPDWPKEVRRLT 231 (343)
T ss_dssp HHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHTCSEEEETTSTTHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhcCCCEEEcCCcccHHHHHHHHh
Confidence 99999988778899999999998 999999999999999999999998777654 4789999888876643 344444
Q ss_pred C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc
Q 018094 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322 (361)
Q Consensus 246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~ 322 (361)
+ ++|++||++| ...+..++++++++|+++.+|..... ..++...++.|++++.|+...+.++++++++++++|+++
T Consensus 232 ~~~~~d~vi~~~g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~ 310 (343)
T 2eih_A 232 GGKGADKVVDHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK 310 (343)
T ss_dssp TTTCEEEEEESSC-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSC
T ss_pred CCCCceEEEECCC-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCC
Confidence 3 7999999999 45699999999999999999986543 246666778899999999877788899999999999999
Q ss_pred eee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 323 ADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.+ ++|+|+++++||+.+++++..||+|+++
T Consensus 311 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 311 PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp CCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred CceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 887 8999999999999999988889999986
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-55 Score=413.87 Aligned_cols=339 Identities=22% Similarity=0.354 Sum_probs=282.5
Q ss_pred ccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCC
Q 018094 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|.+|+++.+ .+..+.++++++|.|+|+++||+|||++++||++|++.+.|.++.. +|.++|||++|+|+++|+++++
T Consensus 6 ~~~mkA~~~--~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~ 82 (374)
T 2jhf_A 6 VIKCKAAVL--WEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTT 82 (374)
T ss_dssp CEEEEEEEB--CSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCS
T ss_pred ceeEEEEEE--ecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCC
Confidence 444555554 3333358889999999999999999999999999999999876543 7999999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccc-cccC-------------CCcccCCccceEEEeccCceEECC
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA-NKYH-------------DGTITYGGYSDIMVADEHFVVRIP 153 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~g~~~~~~~v~~~~v~~iP 153 (361)
|++||||++.+. ..|+.|.+|++|.++.|++...... +... .+....|+|+||+.+|+++++++|
T Consensus 83 ~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 161 (374)
T 2jhf_A 83 VRPGDKVIPLFT-PQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID 161 (374)
T ss_dssp CCTTCEEEECSS-CCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEECCC-CCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence 999999987765 5899999999999999998643110 1100 011235999999999999999999
Q ss_pred CCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEE
Q 018094 154 EGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSF 232 (361)
Q Consensus 154 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v 232 (361)
+++++++||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++++
T Consensus 162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~v 240 (374)
T 2jhf_A 162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAKEVGATEC 240 (374)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSEE
T ss_pred CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHHhCCceE
Confidence 9999999999999999999999877889999999999999999999999999999 788888887775 45589999999
Q ss_pred ecCCC-----HHHHHHhcC-CccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCC--CcccChHHHhhCCcEEEeccc
Q 018094 233 LVSRD-----QDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMI 303 (361)
Q Consensus 233 ~~~~~-----~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~ 303 (361)
+++.+ .+.+.++++ ++|+|||++|...++..++++++++ |+++.+|.... ...++...++.++ ++.|+..
T Consensus 241 i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~ 319 (374)
T 2jhf_A 241 VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIF 319 (374)
T ss_dssp ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred ecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEEecc
Confidence 88753 234555554 7999999999876689999999999 99999997653 3466767777788 9999865
Q ss_pred CC---HHHHHHHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 304 GG---MKETQEMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 304 ~~---~~~~~~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.. .++++++++++++|++++ .+ ++|+|+++++||+.+++++. +|+|+++
T Consensus 320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~ 374 (374)
T 2jhf_A 320 GGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF 374 (374)
T ss_dssp GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred CCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 42 568999999999999874 34 89999999999999988774 7999874
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-56 Score=415.17 Aligned_cols=337 Identities=22% Similarity=0.276 Sum_probs=290.2
Q ss_pred CCCCCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC-CCCCCCcccccccEEEEE
Q 018094 2 GQAPEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTE 80 (361)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~lG~e~~G~V~~ 80 (361)
+..+.|+.+|+++++... +++.+++.++|.|+|+++||||||+++|||++|++.+.|.++ ...+|.++|||++|+|++
T Consensus 19 ~~~~~m~~~mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~ 97 (363)
T 3uog_A 19 YFQSMMSKWMQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEA 97 (363)
T ss_dssp ----CCCSEEEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEE
T ss_pred EEeccCchhhEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEE
Confidence 334557888998888765 567899999999999999999999999999999999998765 347899999999999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccc
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA 160 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~ 160 (361)
+|+++++|++||||++.+.. +|..|. +.|.+.... ....|....|+|+||+.+|+++++++|+++++++
T Consensus 98 vG~~v~~~~vGDrV~~~~~~-------~c~~g~-~~c~~~~~~---~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~ 166 (363)
T 3uog_A 98 VGKSVTRFRPGDRVISTFAP-------GWLDGL-RPGTGRTPA---YETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAE 166 (363)
T ss_dssp ECTTCCSCCTTCEEEECSST-------TCCSSS-CCSCSSCCC---CCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHH
T ss_pred ECCCCCCCCCCCEEEEeccc-------cccccc-ccccccccc---ccccCcCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999875432 678888 888743111 0112345679999999999999999999999999
Q ss_pred ccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH--
Q 018094 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ-- 238 (361)
Q Consensus 161 aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~-- 238 (361)
||++++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|++|+++++++++++ +++++|++++++...+
T Consensus 167 aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~vi~~~~~~~ 245 (363)
T 3uog_A 167 ASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLD-RAFALGADHGINRLEEDW 245 (363)
T ss_dssp HHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHTCSEEEETTTSCH
T ss_pred HhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHH-HHHHcCCCEEEcCCcccH
Confidence 9999999999999998888899999999999999999999999999999999998887764 4689999999985433
Q ss_pred -HHHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHH
Q 018094 239 -DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMID 314 (361)
Q Consensus 239 -~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 314 (361)
+.+.++++ ++|++||++|.. .+..++++++++|+++.+|...+. ..++...++.+++++.|+...+.++++++++
T Consensus 246 ~~~v~~~~~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 324 (363)
T 3uog_A 246 VERVYALTGDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVG 324 (363)
T ss_dssp HHHHHHHHTTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHH
Confidence 34555554 799999999965 499999999999999999987653 5677777888999999999989999999999
Q ss_pred HHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 315 FAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 315 ~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++++++.+ ++|+++++++||+.+.+++ .||+|+++
T Consensus 325 l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~ 363 (363)
T 3uog_A 325 AVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF 363 (363)
T ss_dssp HHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred HHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence 99999999887 8999999999999999999 89999985
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-56 Score=414.18 Aligned_cols=330 Identities=21% Similarity=0.267 Sum_probs=270.9
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhC-CCC--CCCCCCcccccccEEEEEeCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKN-EWG--NAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
+|+++.+...+ ..++++++|.|+|+++||||||.+++||++|++.+.| .++ ...+|.++|||++|+|+++|++++
T Consensus 4 ~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~ 81 (348)
T 2d8a_A 4 KMVAIMKTKPG--YGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE 81 (348)
T ss_dssp EEEEEEECSSS--SSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred cceEEEEECCC--CCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence 56766664322 2788999999999999999999999999999999988 432 236789999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccch
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~ 166 (361)
+|++||||++.+.. .|++|.+|++|.++.|++.... |....|+|+||+.+|++.++++|+++++++||.+.
T Consensus 82 ~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~- 152 (348)
T 2d8a_A 82 GIEVGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE- 152 (348)
T ss_dssp SCCTTCEEEECCEE-CCSCCC------------CEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-
T ss_pred cCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCee-------cCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-
Confidence 99999999887765 8999999999999999976432 33467999999999999999999999999998774
Q ss_pred hhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHH
Q 018094 167 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQ 242 (361)
Q Consensus 167 ~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~ 242 (361)
++.|||+++ ...++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++. ++++++|+++++++.+++ .+.
T Consensus 153 ~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~~Ga~~~~~~~~~~~~~~v~ 229 (348)
T 2d8a_A 153 PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAKKVGADYVINPFEEDVVKEVM 229 (348)
T ss_dssp HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHHHHTCSEEECTTTSCHHHHHH
T ss_pred HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEECCCCcCHHHHHH
Confidence 788999999 45668 99999999999999999999999999 999999887765 455899999999876543 445
Q ss_pred HhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccCh-HHHhhCCcEEEecccCC-HHHHHHHHHHHHc
Q 018094 243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMIGG-MKETQEMIDFAAK 318 (361)
Q Consensus 243 ~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~~-~~~~~~~~~~l~~ 318 (361)
++++ ++|++||++|....+..++++++++|+++.+|.......++. ..++.+++++.|+.... .++++++++++++
T Consensus 230 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 309 (348)
T 2d8a_A 230 DITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQS 309 (348)
T ss_dssp HHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHc
Confidence 5554 799999999986668999999999999999998766667777 77788999999987766 7889999999999
Q ss_pred CCC--ceee-EEEe-cccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 319 HNI--RADI-EVIP-ADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 319 ~~l--~~~~-~~~~-l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
|++ ++.+ ++|+ ++++++||+.+++ +..||+|++++
T Consensus 310 g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~ 348 (348)
T 2d8a_A 310 GKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK 348 (348)
T ss_dssp TCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred CCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence 986 4555 8999 9999999999977 56799999864
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-56 Score=416.03 Aligned_cols=329 Identities=20% Similarity=0.279 Sum_probs=282.2
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC---CCCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG---NAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+...+. .++++++|.|+|+++||+|||+++|||++|++.+.|.++ ...+|.++|||++|+|+++|+++++
T Consensus 1 Mka~~~~~~g~--~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 78 (343)
T 2dq4_A 1 MRALAKLAPEE--GLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRR 78 (343)
T ss_dssp CEEEEECSSSS--SCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred CeEEEEeCCCC--cEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCc
Confidence 45555544332 288899999999999999999999999999999988654 2467899999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
|++||||++.+.. .|++|.+|++|.+++|++.... |....|+|+||+.+|+++++++|+++++++|+.+ .+
T Consensus 79 ~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~ 149 (343)
T 2dq4_A 79 PQVGDHVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EP 149 (343)
T ss_dssp SCTTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HH
T ss_pred CCCCCEEEECCCC-CCCCChhhhCcCcccCCCccee-------cCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hH
Confidence 9999999887765 7999999999999999986432 3346799999999999999999999999999876 56
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHH
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA 243 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~ 243 (361)
+.+||+++....++ +|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++ +++++++.+++ .+.+
T Consensus 150 ~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~l-a~~v~~~~~~~~~~~~~~ 226 (343)
T 2dq4_A 150 FGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL-AFARPY-ADRLVNPLEEDLLEVVRR 226 (343)
T ss_dssp HHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH-GGGTTT-CSEEECTTTSCHHHHHHH
T ss_pred HHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-HHhccCcCccCHHHHHHH
Confidence 77999999756778 99999999999999999999999999 999999887765 445788 99999886543 3444
Q ss_pred hcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccCh-HHHhhCCcEEEecccC-CHHHHHHHHHHHHcCC
Q 018094 244 AMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPA-FSLLMGRKIVGGSMIG-GMKETQEMIDFAAKHN 320 (361)
Q Consensus 244 ~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~g~~~~-~~~~~~~~~~~l~~~~ 320 (361)
+++ ++|++||++|+...+..++++++++|+++.+|.......++. ..++.|++++.|+... ..++++++++++++|+
T Consensus 227 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~ 306 (343)
T 2dq4_A 227 VTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGR 306 (343)
T ss_dssp HHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTS
T ss_pred hcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCC
Confidence 433 799999999996668999999999999999998766667777 7788899999998766 6788999999999998
Q ss_pred C--ceee-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 321 I--RADI-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 321 l--~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
+ ++.+ ++|+++++++||+.+++++. ||+|++++
T Consensus 307 ~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~ 342 (343)
T 2dq4_A 307 VDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK 342 (343)
T ss_dssp SCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred CChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence 5 5555 89999999999999998887 99999875
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-56 Score=412.28 Aligned_cols=333 Identities=23% Similarity=0.288 Sum_probs=281.6
Q ss_pred cccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhC-CCCC--CCCCCcccccccEEEEEeCCCC
Q 018094 9 HPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKN-EWGN--AIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g-~~~~--~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
.+|+++.+. .++.++++++|.|+|+++||+|||++++||++|++.+.+ .+.. ..+|.++|||++|+|+++|+++
T Consensus 3 ~~mka~~~~---~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v 79 (352)
T 1e3j_A 3 SDNLSAVLY---KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNV 79 (352)
T ss_dssp -CCEEEEEE---ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTC
T ss_pred ccCEEEEEE---cCCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCC
Confidence 347776664 356788999999999999999999999999999998873 3321 2578999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
++|++||||++.+.. .|+.|.+|++|.++.|++..+... ....|+|+||+.+|+++++++|+++++++||.+
T Consensus 80 ~~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~- 151 (352)
T 1e3j_A 80 KHLKKGDRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCAT------PPDDGNLARYYVHAADFCHKLPDNVSLEEGALL- 151 (352)
T ss_dssp CSCCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTH-
T ss_pred CCCCCCCEEEEcCcC-CCCCChhhhCcCcccCCCCcccCc------CCCCccceeEEEeChHHeEECcCCCCHHHHHhh-
Confidence 999999999887654 899999999999999998643211 124799999999999999999999999998865
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-H---HHH
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-Q---DEM 241 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~---~~~ 241 (361)
.++.+||++++ ..++++|++|||+|+|++|++++|+|+.+|++|++++++++++ ++++++|+++++++++ . +.+
T Consensus 152 ~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~~~~~~~~~~~~~~i 229 (352)
T 1e3j_A 152 EPLSVGVHACR-RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADVTLVVDPAKEEESSI 229 (352)
T ss_dssp HHHHHHHHHHH-HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEECCTTTSCHHHH
T ss_pred chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHhCCCEEEcCcccccHHHHH
Confidence 57889999994 5668999999999999999999999999999988888877665 5568999999988763 3 344
Q ss_pred HHhc-----CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHH
Q 018094 242 QAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFA 316 (361)
Q Consensus 242 ~~~~-----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l 316 (361)
.+.+ .++|++||++|...++..++++++++|+++.+|.......++...++.+++++.|+... .++++++++++
T Consensus 230 ~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~ 308 (352)
T 1e3j_A 230 IERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRY-CNDYPIALEMV 308 (352)
T ss_dssp HHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSC-SSCHHHHHHHH
T ss_pred HHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccc-hHHHHHHHHHH
Confidence 4443 37999999999976689999999999999999976555667777888999999998765 46799999999
Q ss_pred HcCCCc--eee-EEEecccHHHHHHHHHcCC-CcEEEEEEeCC
Q 018094 317 AKHNIR--ADI-EVIPADYVNTALERLAKAD-VRYRFVIDVAN 355 (361)
Q Consensus 317 ~~~~l~--~~~-~~~~l~~~~~a~~~~~~~~-~~gkvvi~~~~ 355 (361)
++|+++ +.+ ++|+++++++||+.+.+++ ..||+|++++.
T Consensus 309 ~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 351 (352)
T 1e3j_A 309 ASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ 351 (352)
T ss_dssp HTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred HcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence 999875 445 8999999999999999888 68999998863
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-56 Score=412.88 Aligned_cols=331 Identities=22% Similarity=0.308 Sum_probs=280.5
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCC-CC--CCCCCCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE-WG--NAIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+ . .++.+++.++|.|+|+++||+|||.++|||++|++.+.|. +. ...+|.++|||++|+|+++|+++++
T Consensus 8 mka~~~--~-~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~ 84 (356)
T 1pl8_A 8 NLSLVV--H-GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84 (356)
T ss_dssp CEEEEE--E-ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred ceEEEE--e-cCCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence 555554 3 3567889999999999999999999999999999988743 21 1357899999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
|++||||++.+.. .|++|.+|++|.++.|++..+... ....|+|+||+.+|+++++++|+++++++|+.+ .+
T Consensus 85 ~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~g~------~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~~ 156 (356)
T 1pl8_A 85 LKPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFCAT------PPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-EP 156 (356)
T ss_dssp CCTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-HH
T ss_pred CCCCCEEEEeccC-CCCCChHHHCcCcccCCCccccCc------CCCCCccccEEEeehHHEEECcCCCCHHHHHhh-ch
Confidence 9999999887765 899999999999999998643210 124799999999999999999999999998865 57
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCC---CHH---H
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR---DQD---E 240 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~---~~~---~ 240 (361)
+.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++++++++ ..+ .
T Consensus 157 ~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~~~~~~~~~~~ 234 (356)
T 1pl8_A 157 LSVGIHACR-RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKEIGADLVLQISKESPQEIARK 234 (356)
T ss_dssp HHHHHHHHH-HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCSEEEECSSCCHHHHHHH
T ss_pred HHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhCCCEEEcCcccccchHHHH
Confidence 889999995 5568999999999999999999999999999 899998887765 556899999999887 233 3
Q ss_pred HHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcC
Q 018094 241 MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319 (361)
Q Consensus 241 ~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~ 319 (361)
+.+.+ .++|+|||++|+...+..++++++++|+++.+|.......++...++.+++++.|+... .++++++++++++|
T Consensus 235 i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~l~~~g 313 (356)
T 1pl8_A 235 VEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CNTWPVAISMLASK 313 (356)
T ss_dssp HHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-SSCHHHHHHHHHTT
T ss_pred HHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEeccc-HHHHHHHHHHHHcC
Confidence 33444 48999999999976689999999999999999976555677778888999999998765 46799999999999
Q ss_pred CCc--eee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 320 NIR--ADI-EVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 320 ~l~--~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
+++ +.+ ++|+++++++||+.++++ ..||+|++++++
T Consensus 314 ~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~ 352 (356)
T 1pl8_A 314 SVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS 352 (356)
T ss_dssp SCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred CCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence 875 445 899999999999999988 789999999753
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-55 Score=409.18 Aligned_cols=329 Identities=21% Similarity=0.287 Sum_probs=277.6
Q ss_pred cccceecccCCCCCccceeeeccC-CCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~-~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++ ..++.++++++|+|+ ++||||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus 1 MkAvv~---~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~ 76 (346)
T 4a2c_A 1 MKSVVN---DTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLH 76 (346)
T ss_dssp CEEEEE---CSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred CCEEEE---ecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCccccc
Confidence 566665 466789999999998 5799999999999999999999888654 46899999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+.. .|++|.+|..|.++.|.+..+. |...+|+|+||+.+|+++++++|+++++++||.+. ...
T Consensus 77 ~GdrV~~~~~~-~~g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~ 147 (346)
T 4a2c_A 77 PGDAVACVPLL-PCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PIT 147 (346)
T ss_dssp TTCEEEECCEE-CCSCSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHH
T ss_pred CCCeEEeeecc-CCCCcccccCCccccCCCcccc-------cCCCCcccccccccchheEEECCCCCCHHHHHhch-HHH
Confidence 99999877665 8999999999999999987543 45678999999999999999999999999998765 344
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG 246 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~ 246 (361)
++++++ ....+++|++|||+|+|++|++++|+||.+|++++++++..+++.++++++|+++++++++.+ .+.++++
T Consensus 148 ~~~~~~-~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~ 226 (346)
T 4a2c_A 148 VGLHAF-HLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRE 226 (346)
T ss_dssp HHHHHH-HHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGG
T ss_pred HHHHHH-HHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcc
Confidence 455544 556689999999999999999999999999997655554444455777999999999987643 4445554
Q ss_pred --CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCccc---ChHHHhhCCcEEEecccC-----CHHHHHHHHHHH
Q 018094 247 --TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLEL---PAFSLLMGRKIVGGSMIG-----GMKETQEMIDFA 316 (361)
Q Consensus 247 --g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~g~~~~-----~~~~~~~~~~~l 316 (361)
++|+|||++|...+++.++++++++|+++.+|...+...+ +...++.|++++.|++.. ..++++++++++
T Consensus 227 ~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~ 306 (346)
T 4a2c_A 227 LRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLL 306 (346)
T ss_dssp GCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHH
T ss_pred cCCcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHH
Confidence 7999999999988899999999999999999987765443 344578899999998653 246799999999
Q ss_pred HcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 317 AKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 317 ~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++|++++ .+ ++|+|+++++||+.+++++..||+||.+
T Consensus 307 ~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 307 TERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp HTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred HcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 9998864 35 8999999999999999999999999863
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-56 Score=417.27 Aligned_cols=333 Identities=18% Similarity=0.215 Sum_probs=281.4
Q ss_pred cccccccceecccCCCCCccceeeecc--------CCCCCeEEEEEeeeccccchhhhhhCC-CC--CCCCCCccccccc
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRR--------ATGEKDVTFKVTHCGICHSDLHLIKNE-WG--NAIYPIVPGHEIV 75 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p--------~~~~~~vlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~~lG~e~~ 75 (361)
++.+|+++.+ .+++.+++.++|.| +|+++||||||++++||++|++.+.+. +. ...+|.++|||++
T Consensus 5 ~~~~mka~~~---~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~ 81 (363)
T 3m6i_A 5 ASKTNIGVFT---NPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESA 81 (363)
T ss_dssp CCSCCEEEEE---CTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEE
T ss_pred CcccceeEEE---eCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceE
Confidence 4555666655 46778999999999 999999999999999999999988742 22 2367899999999
Q ss_pred EEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCC
Q 018094 76 GVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155 (361)
Q Consensus 76 G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~ 155 (361)
|+|+++|+++++|++||||++.+.. .|+.|.+|++|.++.|++..+... ....|+|+||+.+|+++++++|+
T Consensus 82 G~V~~vG~~v~~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~g~------~~~~G~~aey~~v~~~~~~~iP~- 153 (363)
T 3m6i_A 82 GEVIAVHPSVKSIKVGDRVAIEPQV-ICNACEPCLTGRYNGCERVDFLST------PPVPGLLRRYVNHPAVWCHKIGN- 153 (363)
T ss_dssp EEEEEECTTCCSCCTTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEETTS------TTSCCSCBSEEEEEGGGEEECTT-
T ss_pred EEEEEECCCCCCCCCCCEEEEeccc-CCCCCHHHHCcCcccCCCccccCC------CCCCccceeEEEEehhhEEECCC-
Confidence 9999999999999999999887764 999999999999999998754311 13579999999999999999999
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEec
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
+++++||.+ .++.|||+++. ..++++|++|||+|+|++|++++|+||.+|++ |++++.+++++ ++++++ ++.+++
T Consensus 154 ~s~~~aa~~-~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l-~~~~~~ 229 (363)
T 3m6i_A 154 MSYENGAML-EPLSVALAGLQ-RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL-KFAKEI-CPEVVT 229 (363)
T ss_dssp CCHHHHHHH-HHHHHHHHHHH-HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHH-HHHHHH-CTTCEE
T ss_pred CCHHHHHhh-hHHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh-chhccc
Confidence 999999977 57889999994 56689999999999999999999999999996 88888877765 556888 644444
Q ss_pred CC----C-HH---HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccC
Q 018094 235 SR----D-QD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIG 304 (361)
Q Consensus 235 ~~----~-~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~ 304 (361)
+. + ++ .+.++++ ++|++||++|+..++..++++++++|+++.+|.......++...++.+++++.++...
T Consensus 230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~ 309 (363)
T 3m6i_A 230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRY 309 (363)
T ss_dssp EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSC
T ss_pred ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCC
Confidence 32 2 22 3445553 7999999999986689999999999999999987777778888889999999999766
Q ss_pred CHHHHHHHHHHHHcCCCc--eee-EEEecccHHHHHHHHHcC-CCcEEEEEEeCC
Q 018094 305 GMKETQEMIDFAAKHNIR--ADI-EVIPADYVNTALERLAKA-DVRYRFVIDVAN 355 (361)
Q Consensus 305 ~~~~~~~~~~~l~~~~l~--~~~-~~~~l~~~~~a~~~~~~~-~~~gkvvi~~~~ 355 (361)
.++++++++++++|+++ +.+ ++|+|+++++||+.++++ ...+|+|++.++
T Consensus 310 -~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 310 -CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp -SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred -HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 67899999999999984 445 899999999999999987 567999999864
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-56 Score=411.10 Aligned_cols=329 Identities=26% Similarity=0.391 Sum_probs=286.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC--------CCCCCCcccccccEEEEEeC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG--------NAIYPIVPGHEIVGVVTEVG 82 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~~lG~e~~G~V~~vG 82 (361)
|+++.+... .+.+++.++|.|+|+++||+|||.+++||++|++.+.|.++ ...+|.++|||++|+|+++|
T Consensus 1 Mka~~~~~~--g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 78 (347)
T 1jvb_A 1 MRAVRLVEI--GKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78 (347)
T ss_dssp CEEEEECST--TSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred CeEEEEecC--CCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEEC
Confidence 455555332 23588899999999999999999999999999999888654 24678999999999999999
Q ss_pred CCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEecc-CceEECCCCCCcccc
Q 018094 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE-HFVVRIPEGTPLDAT 161 (361)
Q Consensus 83 ~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~v~~iP~~~~~~~a 161 (361)
+++++|++||||+..+ ...|++|.+|++|.+++|++.... |....|+|+||+.+|+ ++++++ +++++++|
T Consensus 79 ~~v~~~~vGdrV~~~~-~~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~a 149 (347)
T 1jvb_A 79 DEVVGYSKGDLVAVNP-WQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKL-RRLNAVEA 149 (347)
T ss_dssp TTCCSCCTTCEEEECC-EECCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEEC-SSSCHHHH
T ss_pred CCCCCCCCCCEEEeCC-CCCCCCChhhhCcCcccCcccccc-------cccCCCcceeEEEecCccceEEe-CCCCHHHc
Confidence 9999999999996544 458999999999999999976432 3346799999999999 999999 99999999
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
+++++++.|||+++.+ .++++|++|||+|+ |++|++++|+++.. |++|+++++++++.. .++++|++.++++.+.+
T Consensus 150 a~l~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 227 (347)
T 1jvb_A 150 APLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AAKRAGADYVINASMQD 227 (347)
T ss_dssp GGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HHHHHTCSEEEETTTSC
T ss_pred ccchhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHhCCCEEecCCCcc
Confidence 9999999999999976 67899999999998 59999999999999 999999998877764 45889999988876644
Q ss_pred H---HHHhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC-CCcccChHHHhhCCcEEEecccCCHHHHHHHH
Q 018094 240 E---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMI 313 (361)
Q Consensus 240 ~---~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 313 (361)
. +.+++ +++|++||++|+...+..++++++++|+++.+|... .. .++...++.+++++.|+...+.+++++++
T Consensus 228 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 306 (347)
T 1jvb_A 228 PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIM 306 (347)
T ss_dssp HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHH
Confidence 3 55555 479999999999856889999999999999999866 45 77777788899999999888889999999
Q ss_pred HHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 314 DFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 314 ~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++|++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus 307 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 307 RLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp HHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 999999999887 9999999999999999998889999974
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-56 Score=415.47 Aligned_cols=340 Identities=22% Similarity=0.315 Sum_probs=288.8
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
|...|+++.+...+ +.+++.++|.|+|+++||||||+++|||++|++.+.|.++...+|.++|||++|+|+++| +++
T Consensus 14 ~~~~mka~~~~~~g--~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~ 90 (380)
T 1vj0_A 14 MGLKAHAMVLEKFN--QPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEK 90 (380)
T ss_dssp CCEEEEEEEBCSTT--SCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCC
T ss_pred hhhheEEEEEecCC--CCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccc
Confidence 56677777764332 378899999999999999999999999999999999876545689999999999999999 999
Q ss_pred ------CCCCCCEEEEccccCCCCCCcccc-cCCCCCCcccccccc-cccCCCcccCCccceEEEe-ccCceEECCCCCC
Q 018094 87 ------KFKVGDKVGVGCMVGSCRSCDSCA-IDLENYCPKVIMTYA-NKYHDGTITYGGYSDIMVA-DEHFVVRIPEGTP 157 (361)
Q Consensus 87 ------~~~~Gd~V~~~~~~~~c~~c~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~v-~~~~v~~iP~~~~ 157 (361)
+|++||||++.+.. .|+.|.+|+ +|.++.|++...... ..........|+|+||+.+ |++.++++|++++
T Consensus 91 ~~~~~~~~~vGdrV~~~~~~-~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~ 169 (380)
T 1vj0_A 91 RDLNGELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDD 169 (380)
T ss_dssp BCTTSCBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSC
T ss_pred ccccCCCCCCCCEEEEcccC-CCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCCC
Confidence 99999999887765 799999999 999999997643110 0000001347999999999 9999999999999
Q ss_pred cc-cccccchhhhhhhHHHHhhCC-CCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEec
Q 018094 158 LD-ATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 158 ~~-~aa~l~~~~~~a~~~l~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
++ +|+.+. ++.|||+++.. .+ +++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++|++++++
T Consensus 170 ~~~~Aa~~~-~~~ta~~al~~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~vi~ 246 (380)
T 1vj0_A 170 LDVLAMAMC-SGATAYHAFDE-YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADLTLN 246 (380)
T ss_dssp HHHHHHHTT-HHHHHHHHHHT-CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSEEEE
T ss_pred hHHhHhhhc-HHHHHHHHHHh-cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHHHcCCcEEEe
Confidence 99 665555 89999999964 57 8999999999999999999999999995 999999888776 4558999999998
Q ss_pred CC---CHH---HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC-C-CcccChHH-HhhCCcEEEeccc
Q 018094 235 SR---DQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-K-PLELPAFS-LLMGRKIVGGSMI 303 (361)
Q Consensus 235 ~~---~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~~i~g~~~ 303 (361)
+. +.+ .+.++++ ++|+|||++|+...+..++++++++|+++.+|... + ...++... ++.|++++.|+..
T Consensus 247 ~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 326 (380)
T 1vj0_A 247 RRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV 326 (380)
T ss_dssp TTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCC
T ss_pred ccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeec
Confidence 76 443 3445554 79999999998766899999999999999999876 5 56777777 8889999999988
Q ss_pred CCHHHHHHHHHHHHc--CCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 304 GGMKETQEMIDFAAK--HNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 304 ~~~~~~~~~~~~l~~--~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
.+.++++++++++++ |++++.+ ++|+|+++++||+.+++++.. |+|++++
T Consensus 327 ~~~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~ 379 (380)
T 1vj0_A 327 SDTSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE 379 (380)
T ss_dssp CCHHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred CCHHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence 888999999999999 9997776 899999999999999998888 9999875
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-55 Score=406.21 Aligned_cols=333 Identities=20% Similarity=0.301 Sum_probs=279.7
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhh-hhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLH-LIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~-~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++. .++.+++.++|.|+|+++||+|||++++||++|++ +..|.++ ..+|.++|||++|+|+++|+++++|+
T Consensus 1 MkA~~~~---~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~ 76 (352)
T 3fpc_A 1 MKGFAML---SIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFK 76 (352)
T ss_dssp CEEEEEE---ETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred CeEEEEc---cCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCC
Confidence 5566653 45568889999999999999999999999999999 5577665 36799999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCcccccccchh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~~~aa~l~~~ 167 (361)
+||||++.+.. .|+.|.+|++|.++.|...... +..+....|+|+||+.+|+. .++++|+++++++|+.++++
T Consensus 77 vGdrV~~~~~~-~c~~c~~c~~g~~~~~~~~~~~----~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~ 151 (352)
T 3fpc_A 77 PGDRVVVPAIT-PDWRTSEVQRGYHQHSGGMLAG----WKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDM 151 (352)
T ss_dssp TTCEEEECSBC-CCSSSHHHHTTCGGGTTSTTTT----BCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTH
T ss_pred CCCEEEEcccc-CCCCchhhcCCCcCCccccccc----cccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccch
Confidence 99999887655 8999999999999988764221 11234578999999999976 89999999999999999999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHH
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQA 243 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~ 243 (361)
+.|||++++ ...+++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|+++++++++.+ .+.+
T Consensus 152 ~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~~~v~~ 229 (352)
T 3fpc_A 152 MTTGFHGAE-LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIALEYGATDIINYKNGDIVEQILK 229 (352)
T ss_dssp HHHHHHHHH-HTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHHHHTCCEEECGGGSCHHHHHHH
T ss_pred hHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHHHhCCceEEcCCCcCHHHHHHH
Confidence 999999994 5668999999999999999999999999999 798888777665 666999999999876543 4555
Q ss_pred hcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC--cccChH--HHhhCCcEEEecccC-CHHHHHHHHHHH
Q 018094 244 AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LELPAF--SLLMGRKIVGGSMIG-GMKETQEMIDFA 316 (361)
Q Consensus 244 ~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~--~~~~~~~~i~g~~~~-~~~~~~~~~~~l 316 (361)
+++ ++|+|||++|+..++..++++++++|+++.+|...+. +.++.. .+..+++++.++... +.++++++++++
T Consensus 230 ~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~ 309 (352)
T 3fpc_A 230 ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLV 309 (352)
T ss_dssp HTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHH
T ss_pred HcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHH
Confidence 554 6999999999976799999999999999999976543 222222 234588999998764 467899999999
Q ss_pred HcCCCcee--e-EEEe-cccHHHHHHHHHcCCCc-EEEEEEeC
Q 018094 317 AKHNIRAD--I-EVIP-ADYVNTALERLAKADVR-YRFVIDVA 354 (361)
Q Consensus 317 ~~~~l~~~--~-~~~~-l~~~~~a~~~~~~~~~~-gkvvi~~~ 354 (361)
++|++++. + ++|+ |+++++||+.+++++.. +|+|++++
T Consensus 310 ~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 310 FYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp HTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred HcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 99999874 4 8999 99999999999986654 89999874
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-54 Score=409.00 Aligned_cols=336 Identities=21% Similarity=0.245 Sum_probs=281.9
Q ss_pred ccccceecccCCCCCccceeeeccCC-CC-----CeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRAT-GE-----KDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~-~~-----~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~ 83 (361)
+|+++.+. .++.++++++|.|+| ++ +||+|||.++|||++|++.+.|.++ ..+|.++|||++|+|+++|+
T Consensus 2 ~MkA~~~~---~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~ 77 (398)
T 2dph_A 2 GNKSVVYH---GTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGS 77 (398)
T ss_dssp CEEEEEEE---ETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECT
T ss_pred ccEEEEEE---cCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECC
Confidence 46776664 356788999999987 68 9999999999999999999988653 46789999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcc--cccc----cccccCCCcccCCccceEEEeccC--ceEECCCC
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPK--VIMT----YANKYHDGTITYGGYSDIMVADEH--FVVRIPEG 155 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~ 155 (361)
++++|++||||++.+.. .|+.|.+|++|.++.|++ .... ..+. . .....|+|+||+++|+. .++++|++
T Consensus 78 ~v~~~~vGDrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~-~-~~~~~G~~aey~~v~~~~~~~~~iP~~ 154 (398)
T 2dph_A 78 DVELMDIGDLVSVPFNV-ACGRCRNCKEARSDVCENNLVNPDADLGAFGF-D-LKGWSGGQAEYVLVPYADYMLLKFGDK 154 (398)
T ss_dssp TCCSCCTTCEEECCSBC-CCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTT-T-BSSCCCSSBSEEEESSHHHHCEECSSH
T ss_pred CCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCcccccccccccccc-c-cCCCCceeeeeEEeccccCeEEECCCC
Confidence 99999999999876654 899999999999999987 2100 0110 0 01246999999999987 89999999
Q ss_pred CCccc----ccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCc
Q 018094 156 TPLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD 230 (361)
Q Consensus 156 ~~~~~----aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~ 230 (361)
+++++ |+++++++.|||++++ ..++++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++|++
T Consensus 155 ~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~ 232 (398)
T 2dph_A 155 EQAMEKIKDLTLISDILPTGFHGCV-SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL-KLLSDAGFE 232 (398)
T ss_dssp HHHHHTHHHHTTTTTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHHTTTCE
T ss_pred CChhhhcchhhhhcCHHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHcCCc
Confidence 99998 8899999999999995 6678999999999999999999999999999 999999887776 556899995
Q ss_pred EEecCCCH----HHHHHhcC--CccEEEEcCCCcc--------------cHHHHHHhhccCCEEEEecCCC---------
Q 018094 231 SFLVSRDQ----DEMQAAMG--TMDGIIDTVSAVH--------------PLMPLIGLLKSQGKLVLVGAPE--------- 281 (361)
Q Consensus 231 ~v~~~~~~----~~~~~~~~--g~d~vid~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~--------- 281 (361)
++++.+. +.+.++++ ++|+|||++|+.. ++..++++++++|+++.+|...
T Consensus 233 -~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~ 311 (398)
T 2dph_A 233 -TIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNK 311 (398)
T ss_dssp -EEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSH
T ss_pred -EEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccc
Confidence 7777553 34555554 6999999999863 4889999999999999999762
Q ss_pred ----CCcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc--e--ee-EEEecccHHHHHHHHHcCCCcEEEEEE
Q 018094 282 ----KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR--A--DI-EVIPADYVNTALERLAKADVRYRFVID 352 (361)
Q Consensus 282 ----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~--~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~ 352 (361)
....++...++.|++++.++.....++++++++++++|+++ + .+ ++|+|+++++||+.+.+++. ||+|++
T Consensus 312 ~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~ 390 (398)
T 2dph_A 312 DAGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVID 390 (398)
T ss_dssp HHHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEEC
T ss_pred cccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEe
Confidence 22456666778899999998776677899999999999999 6 34 89999999999999999888 999999
Q ss_pred eCCc
Q 018094 353 VANT 356 (361)
Q Consensus 353 ~~~~ 356 (361)
++..
T Consensus 391 ~~~~ 394 (398)
T 2dph_A 391 PHGM 394 (398)
T ss_dssp TTSC
T ss_pred cCcc
Confidence 8643
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-54 Score=409.31 Aligned_cols=319 Identities=20% Similarity=0.325 Sum_probs=275.8
Q ss_pred CccceeeeccC-CCCCeEEEEEeeeccccchhhhhhCCC------C-CCCCCCcccccccEEEEEeCCCC------CCCC
Q 018094 24 VLSPFHFSRRA-TGEKDVTFKVTHCGICHSDLHLIKNEW------G-NAIYPIVPGHEIVGVVTEVGSKV------SKFK 89 (361)
Q Consensus 24 ~l~~~~~~~p~-~~~~~vlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~lG~e~~G~V~~vG~~~------~~~~ 89 (361)
.++++++|.|+ |+++||||||.+++||++|++.+.|.. + ...+|.++|||++|+|+++|+++ ++|+
T Consensus 41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~ 120 (404)
T 3ip1_A 41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE 120 (404)
T ss_dssp EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence 68889999999 999999999999999999999987642 1 23678999999999999999999 8899
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCc------ccccc
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPL------DATAP 163 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~------~~aa~ 163 (361)
+||||++.+.. .|+.|.+|++|.++.|++.... |....|+|+||+.+|++.++++|+++++ .++++
T Consensus 121 vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~ 192 (404)
T 3ip1_A 121 IGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS 192 (404)
T ss_dssp TTCEEEECSEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHH
T ss_pred CCCEEEECCcc-CCCCCHHHHCcCcccCcccccc-------CCCCCCCCcceEEechHHeEeccccccccccccchhHHh
Confidence 99999887775 7999999999999999986432 4456899999999999999999999864 44888
Q ss_pred cchhhhhhhHHHHhh-CCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHH--
Q 018094 164 LLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQD-- 239 (361)
Q Consensus 164 l~~~~~~a~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~-- 239 (361)
++.++.+||+++... +++++|++|||+|+|++|++++|+||.+|+ +|++++.+++++ ++++++|+++++++.+++
T Consensus 193 l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~ 271 (404)
T 3ip1_A 193 LVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRR-NLAKELGADHVIDPTKENFV 271 (404)
T ss_dssp THHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHHHHTCSEEECTTTSCHH
T ss_pred hhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHcCCCEEEcCCCCCHH
Confidence 999999999999754 378999999999999999999999999999 888888777665 566999999999986644
Q ss_pred -HHHHhcC--CccEEEEcCCCc-ccHHHHHHhh----ccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC-HHHHH
Q 018094 240 -EMQAAMG--TMDGIIDTVSAV-HPLMPLIGLL----KSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG-MKETQ 310 (361)
Q Consensus 240 -~~~~~~~--g~d~vid~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~-~~~~~ 310 (361)
.+.++++ ++|+|||++|+. ..+..+++++ +++|+++.+|...+...++...++.+++++.|+.... .++++
T Consensus 272 ~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 351 (404)
T 3ip1_A 272 EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFP 351 (404)
T ss_dssp HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHH
T ss_pred HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHH
Confidence 4555554 699999999997 2466777777 9999999999887777888888999999999998644 67899
Q ss_pred HHHHHHHcCCCce--ee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 311 EMIDFAAKHNIRA--DI-EVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 311 ~~~~~l~~~~l~~--~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
++++++++| +++ .+ ++|+|+++++||+.+. .||+|++++++
T Consensus 352 ~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~~ 395 (404)
T 3ip1_A 352 RVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTML 395 (404)
T ss_dssp HHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEEE
T ss_pred HHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCCC
Confidence 999999999 764 34 8999999999999887 58999988755
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-55 Score=405.31 Aligned_cols=327 Identities=18% Similarity=0.210 Sum_probs=276.5
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCC---CCcccccccEEEEEeCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIY---PIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~---p~~lG~e~~G~V~~vG~~~~~ 87 (361)
|+++.+... ...++++++|.|+|+++||||||+++|||++|++.+.|.++...+ |.++|||++| |+++|++ ++
T Consensus 1 MkA~~~~~~--~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~ 76 (357)
T 2b5w_A 1 MKAIAVKRG--EDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TE 76 (357)
T ss_dssp CEEEEEETT--CSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SS
T ss_pred CeEEEEeCC--CCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CC
Confidence 455555332 224888999999999999999999999999999999987654456 8999999999 9999999 99
Q ss_pred CCCCCEEEEccccCC--CCCCcccccCCCCCCcccccccccccCCCc-ccCCccceEEEeccCceEECCCCCCccccccc
Q 018094 88 FKVGDKVGVGCMVGS--CRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~--c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l 164 (361)
|++||||++.+.. . |++|.+|++|.+++|++..+.. .|. ...|+|+||+.+|++.++++|++++ + +|++
T Consensus 77 ~~vGdrV~~~~~~-~~~cg~C~~C~~g~~~~C~~~~~~~-----~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal 148 (357)
T 2b5w_A 77 LEEGDIVVPTVRR-PPASGTNEYFERDQPDMAPDGMYFE-----RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFL 148 (357)
T ss_dssp CCTTCEEEECSEE-CCTTCCCHHHHTTCGGGCCTTSCEE-----ETTBEECCSCBSEEEEEGGGEEECCGGGS-T-TGGG
T ss_pred CCCCCEEEECCcC-CCCCCCChHHhCcCcccCCCCcccc-----cCccCCCcceeeEEEEchHHeEECCCCcc-h-hhhh
Confidence 9999999887654 4 9999999999999999864321 011 3479999999999999999999999 5 4568
Q ss_pred chhhhhhhHHHHhhCCCCCC------CEEEEEccchHHHHH-HHHH-HHCCCe-EEEEeCCch---hHHHHHHHcCCcEE
Q 018094 165 LCAGITVYSPLRFYGLDKPG------MHVGVVGLGGLGHVA-VKFA-KAMGVK-VTVISTSPS---KKSEAIERLGADSF 232 (361)
Q Consensus 165 ~~~~~~a~~~l~~~~~~~~g------~~VlI~Gag~vG~~a-~~la-~~~g~~-Vi~~~~~~~---~~~~~~~~~g~~~v 232 (361)
+.++.|||++++ ..++++| ++|||+|+|++|+++ +|+| |.+|++ |++++++++ ++ ++++++|++++
T Consensus 149 ~~~~~ta~~al~-~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~~lGa~~v 226 (357)
T 2b5w_A 149 IEPISITEKALE-HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIEELDATYV 226 (357)
T ss_dssp HHHHHHHHHHHH-HHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHHHTTCEEE
T ss_pred hchHHHHHHHHH-hcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHHHcCCccc
Confidence 889999999995 4567999 999999999999999 9999 999997 999998877 65 45589999998
Q ss_pred ecCCCHHH--HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC-CCcccChHHH----hhCCcEEEecccCC
Q 018094 233 LVSRDQDE--MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSL----LMGRKIVGGSMIGG 305 (361)
Q Consensus 233 ~~~~~~~~--~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i~g~~~~~ 305 (361)
++++++. +.++.+++|+|||++|+..++..++++++++|+++.+|... ....++...+ +.+++++.|+...+
T Consensus 227 -~~~~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 305 (357)
T 2b5w_A 227 -DSRQTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSH 305 (357)
T ss_dssp -ETTTSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCC
T ss_pred -CCCccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCC
Confidence 8765322 44543479999999999766899999999999999999876 5566777777 88999999998888
Q ss_pred HHHHHHHHHHHHcC--C-Cceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 306 MKETQEMIDFAAKH--N-IRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 306 ~~~~~~~~~~l~~~--~-l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
.++++++++++++| + +++.+ ++|+++++++||+.+ +..||+|+++++
T Consensus 306 ~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~ 356 (357)
T 2b5w_A 306 VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST 356 (357)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence 89999999999999 8 57766 899999999999987 347999999864
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-54 Score=404.46 Aligned_cols=339 Identities=22% Similarity=0.243 Sum_probs=280.3
Q ss_pred ccccceecccCCCCCccceeeeccCCC-CCe------EEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATG-EKD------VTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVG 82 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~-~~~------vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG 82 (361)
+|+++.+. .++.++++++|.|+|. ++| |||||++++||++|++.+.|.++ ..+|.++|||++|+|+++|
T Consensus 2 ~Mka~~~~---~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG 77 (398)
T 1kol_A 2 GNRGVVYL---GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKG 77 (398)
T ss_dssp CEEEEEEE---ETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEEC
T ss_pred ccEEEEEe---cCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEEC
Confidence 46776654 3457888999999997 898 99999999999999999988653 3578999999999999999
Q ss_pred CCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCc----ccCCccceEEEeccC--ceEECCCCC
Q 018094 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT----ITYGGYSDIMVADEH--FVVRIPEGT 156 (361)
Q Consensus 83 ~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~v~~~--~v~~iP~~~ 156 (361)
+++++|++||||++.+. ..|+.|.+|++|.+++|++......+. ..|. ...|+|+||+++|+. +++++|+++
T Consensus 78 ~~v~~~~vGDrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~-~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~ 155 (398)
T 1kol_A 78 RDVENLQIGDLVSVPFN-VACGRCRSCKEMHTGVCLTVNPARAGG-AYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRD 155 (398)
T ss_dssp TTCCSCCTTCEEECCSE-ECCSSSHHHHTTCGGGCSSSCSSSSCE-EBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHH
T ss_pred CCCCcCCCCCEEEECCc-CCCCCChHHhCcCcccCCCcccccccc-eeeeccCCCCCceeeeEEEecchhCeEEECCCCc
Confidence 99999999999987654 589999999999999999763210000 0011 246999999999986 899999999
Q ss_pred Cccc----ccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcE
Q 018094 157 PLDA----TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADS 231 (361)
Q Consensus 157 ~~~~----aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~ 231 (361)
++++ ++++++++.|||++++ ..++++|++|||+|+|++|++++|+||.+|+ +|++++++++++ ++++++|++
T Consensus 156 ~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~~lGa~- 232 (398)
T 1kol_A 156 KAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQGFE- 232 (398)
T ss_dssp HHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCE-
T ss_pred chhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHHHcCCc-
Confidence 9888 7889999999999997 5678999999999999999999999999999 688888877765 556899997
Q ss_pred EecCCCH----HHHHHhcC--CccEEEEcCCCcc---------------cHHHHHHhhccCCEEEEecCC-CC-------
Q 018094 232 FLVSRDQ----DEMQAAMG--TMDGIIDTVSAVH---------------PLMPLIGLLKSQGKLVLVGAP-EK------- 282 (361)
Q Consensus 232 v~~~~~~----~~~~~~~~--g~d~vid~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~-~~------- 282 (361)
++++.+. +.+.++++ ++|+|||++|+.. ++..++++++++|+++.+|.. .+
T Consensus 233 ~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~ 312 (398)
T 1kol_A 233 IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDA 312 (398)
T ss_dssp EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSH
T ss_pred EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCccccccc
Confidence 6776542 34556554 7999999999862 588999999999999999975 21
Q ss_pred -----CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCc---eee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 283 -----PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR---ADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 283 -----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~---~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
...++...++.+++++.++.....+.++++++++.+|+++ +.+ ++|+|+++++||+.+.+++. ||+|+++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~ 391 (398)
T 1kol_A 313 AAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDP 391 (398)
T ss_dssp HHHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECT
T ss_pred ccccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEe
Confidence 2345566678899999987665567789999999999998 333 89999999999999999887 9999998
Q ss_pred CCccc
Q 018094 354 ANTMK 358 (361)
Q Consensus 354 ~~~~~ 358 (361)
+...+
T Consensus 392 ~~~~~ 396 (398)
T 1kol_A 392 HKTFS 396 (398)
T ss_dssp TCSSC
T ss_pred CCccc
Confidence 76544
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-53 Score=408.14 Aligned_cols=340 Identities=19% Similarity=0.215 Sum_probs=290.9
Q ss_pred Ccccccccceeccc-------------CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCC------------
Q 018094 6 EQEHPKNAFGWAAR-------------DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNE------------ 60 (361)
Q Consensus 6 ~~~~~~~~~~~~~~-------------~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~------------ 60 (361)
++|.+|+++++... ++++.++++++|.|+|+++||||||.++|||++|++...+.
T Consensus 26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g 105 (456)
T 3krt_A 26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG 105 (456)
T ss_dssp CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence 36777888887654 12357889999999999999999999999999998764321
Q ss_pred -CC----CCCCC-CcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcc-
Q 018094 61 -WG----NAIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI- 133 (361)
Q Consensus 61 -~~----~~~~p-~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~- 133 (361)
.. ...+| .++|||++|+|+++|+++++|++||||++.+. .|..|..|..+.++.|++.... |..
T Consensus 106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--~c~~~~~~~~~~~~~c~~~~~~-------G~~~ 176 (456)
T 3krt_A 106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL--SVELESSDGHNDTMLDPEQRIW-------GFET 176 (456)
T ss_dssp TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE--ECCCCSGGGTTSGGGCTTCEET-------TTTS
T ss_pred ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC--cccccccccccccccCcccccc-------ccCC
Confidence 10 12456 68999999999999999999999999988553 6888999999999999876432 222
Q ss_pred cCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhh--CCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeE
Q 018094 134 TYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKV 210 (361)
Q Consensus 134 ~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~V 210 (361)
..|+|+||+++|+++++++|+++++++||++++++.|||+++... ..+++|++|||+|+ |++|++++|+|+.+|++|
T Consensus 177 ~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~v 256 (456)
T 3krt_A 177 NFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANP 256 (456)
T ss_dssp SSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeE
Confidence 359999999999999999999999999999999999999999764 67899999999998 999999999999999999
Q ss_pred EEEeCCchhHHHHHHHcCCcEEecCCCH--------------------HHHHHhcC--CccEEEEcCCCcccHHHHHHhh
Q 018094 211 TVISTSPSKKSEAIERLGADSFLVSRDQ--------------------DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLL 268 (361)
Q Consensus 211 i~~~~~~~~~~~~~~~~g~~~v~~~~~~--------------------~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l 268 (361)
++++++++++ ++++++|++.++++.+. +.+.++++ ++|+|||++|+. .+..+++++
T Consensus 257 i~~~~~~~~~-~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~~l 334 (456)
T 3krt_A 257 ICVVSSPQKA-EICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGASVFVT 334 (456)
T ss_dssp EEEESSHHHH-HHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHHHE
T ss_pred EEEECCHHHH-HHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHHHh
Confidence 9999877665 55689999999987653 44555554 799999999984 599999999
Q ss_pred ccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCc
Q 018094 269 KSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVR 346 (361)
Q Consensus 269 ~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~ 346 (361)
+++|+++.+|...+. ..++...++.+++++.|+...+.+++.++++++++|++++.+ ++|+|+++++||+.+.+++..
T Consensus 335 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~~~ 414 (456)
T 3krt_A 335 RKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQ 414 (456)
T ss_dssp EEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCSS
T ss_pred hCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCCCC
Confidence 999999999986653 467777788899999999999988999999999999999887 999999999999999999999
Q ss_pred EEEEEEeCCc
Q 018094 347 YRFVIDVANT 356 (361)
Q Consensus 347 gkvvi~~~~~ 356 (361)
||+|+.+.++
T Consensus 415 GKvvv~~~~~ 424 (456)
T 3krt_A 415 GKVGVLCLAP 424 (456)
T ss_dssp SEEEEESSCS
T ss_pred CcEEEEeCCC
Confidence 9999998765
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-53 Score=395.06 Aligned_cols=312 Identities=22% Similarity=0.246 Sum_probs=275.5
Q ss_pred CCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCC-CCCCcccccccEEEEEeCC
Q 018094 5 PEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~lG~e~~G~V~~vG~ 83 (361)
-+||.+|+++.+..++.|+.+++.++|.|+|+++||+|||.++|||++|++.+.|.++.. .+|.++|||++|+|+++|+
T Consensus 23 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~ 102 (353)
T 4dup_A 23 MSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGP 102 (353)
T ss_dssp CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECT
T ss_pred CCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECC
Confidence 347888999998887778889999999999999999999999999999999999877643 5789999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
++++|++||||+. ....|+|+||+.+|++.++++|+++++++||+
T Consensus 103 ~v~~~~vGdrV~~-----------------------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~ 147 (353)
T 4dup_A 103 GVSGYAVGDKVCG-----------------------------------LANGGAYAEYCLLPAGQILPFPKGYDAVKAAA 147 (353)
T ss_dssp TCCSCCTTCEEEE-----------------------------------ECSSCCSBSEEEEEGGGEEECCTTCCHHHHHT
T ss_pred CCCCCCCCCEEEE-----------------------------------ecCCCceeeEEEEcHHHcEeCCCCCCHHHHhh
Confidence 9999999999974 23579999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--- 239 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~--- 239 (361)
+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|++++++++++. .++++|++.++++.+.+
T Consensus 148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lGa~~~~~~~~~~~~~ 226 (353)
T 4dup_A 148 LPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACERLGAKRGINYRSEDFAA 226 (353)
T ss_dssp SHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHTCSEEEETTTSCHHH
T ss_pred hhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcCCCEEEeCCchHHHH
Confidence 99999999999988888999999999965 99999999999999999999998887764 55889999999887654
Q ss_pred HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cc-cChHHHhhCCcEEEecccCCHHH--------
Q 018094 240 EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LE-LPAFSLLMGRKIVGGSMIGGMKE-------- 308 (361)
Q Consensus 240 ~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~g~~~~~~~~-------- 308 (361)
.+.+.++ ++|++|||+|+.. +..++++++++|+++.+|...+. .. ++...++.+++++.|+......+
T Consensus 227 ~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 305 (353)
T 4dup_A 227 VIKAETGQGVDIILDMIGAAY-FERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRD 305 (353)
T ss_dssp HHHHHHSSCEEEEEESCCGGG-HHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHH
T ss_pred HHHHHhCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHH
Confidence 3334443 7999999999875 89999999999999999986654 33 77778889999999997755332
Q ss_pred --HHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 309 --TQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 309 --~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++++++++++|++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus 306 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 306 DLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp HHHHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred HHHHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 77899999999999887 8999999999999999999999999975
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-53 Score=405.60 Aligned_cols=341 Identities=19% Similarity=0.156 Sum_probs=286.3
Q ss_pred CCcccccccceecccC-----------CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhh---------------
Q 018094 5 PEQEHPKNAFGWAARD-----------TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIK--------------- 58 (361)
Q Consensus 5 ~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~--------------- 58 (361)
.++|.+|+++++...+ +++.++++++|.|+|+++||+|||+++|||++|++...
T Consensus 19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~ 98 (447)
T 4a0s_A 19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR 98 (447)
T ss_dssp SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred cCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence 3578888888886654 12468899999999999999999999999999985421
Q ss_pred -CCCCC-CCCC-CcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcc-c
Q 018094 59 -NEWGN-AIYP-IVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI-T 134 (361)
Q Consensus 59 -g~~~~-~~~p-~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 134 (361)
+.+.. ..+| .++|||++|+|+++|+++++|++||||++.+.. .|+.|. |..+.++.|.+.... |.. .
T Consensus 99 ~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~-~~~~~~-~~~~~~~~c~~~~~~-------G~~~~ 169 (447)
T 4a0s_A 99 QGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEP-ATHGDGMLGTEQRAW-------GFETN 169 (447)
T ss_dssp TCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEE-CCTTSG-GGGTCTTCSTTCEET-------TTTSS
T ss_pred cCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCc-CcCccc-ccccccccccccccc-------cccCC
Confidence 11111 2456 699999999999999999999999999887654 566665 556788999876432 222 3
Q ss_pred CCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhh--CCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEE
Q 018094 135 YGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVT 211 (361)
Q Consensus 135 ~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi 211 (361)
.|+|+||+.+|+++++++|+++++++||++++++.|||+++... .++++|++|||+|+ |++|++++|+|+..|++|+
T Consensus 170 ~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi 249 (447)
T 4a0s_A 170 FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPV 249 (447)
T ss_dssp SCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEE
T ss_pred CCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 59999999999999999999999999999999999999999743 77899999999998 9999999999999999999
Q ss_pred EEeCCchhHHHHHHHcCCcEEecCCCH---------------------HHHHHhcC-CccEEEEcCCCcccHHHHHHhhc
Q 018094 212 VISTSPSKKSEAIERLGADSFLVSRDQ---------------------DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLK 269 (361)
Q Consensus 212 ~~~~~~~~~~~~~~~~g~~~v~~~~~~---------------------~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~ 269 (361)
+++++++++. +++++|+++++++.+. +.+.+.++ ++|++||++|... +..++++++
T Consensus 250 ~~~~~~~~~~-~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~-~~~~~~~l~ 327 (447)
T 4a0s_A 250 AVVSSAQKEA-AVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVAR 327 (447)
T ss_dssp EEESSHHHHH-HHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHH-HHHHHHHSC
T ss_pred EEeCCHHHHH-HHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchH-HHHHHHHHh
Confidence 9998777664 5589999988875432 33444444 7999999999864 899999999
Q ss_pred cCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcE
Q 018094 270 SQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRY 347 (361)
Q Consensus 270 ~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~g 347 (361)
++|+++.+|...+ ...++...++.+++++.|+...+.+++.++++++++|++++.+ ++|+++++++||+.+.+++..|
T Consensus 328 ~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~G 407 (447)
T 4a0s_A 328 RGGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVG 407 (447)
T ss_dssp TTCEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSS
T ss_pred cCCEEEEEecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCce
Confidence 9999999997665 3466777788899999999999989999999999999999887 8999999999999999999999
Q ss_pred EEEEEeCCc
Q 018094 348 RFVIDVANT 356 (361)
Q Consensus 348 kvvi~~~~~ 356 (361)
|+|+.+.++
T Consensus 408 Kvvv~~~~~ 416 (447)
T 4a0s_A 408 KVAVLCMAP 416 (447)
T ss_dssp EEEEESSCC
T ss_pred EEEEEeCCC
Confidence 999998765
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-52 Score=384.49 Aligned_cols=311 Identities=18% Similarity=0.225 Sum_probs=272.7
Q ss_pred CcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCC
Q 018094 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
++|.+|+++.+...+.+..+++.++|.|+|+++||||||+++|||++|++...|.++ ..+|.++|||++|+|+++|+++
T Consensus 4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v 82 (334)
T 3qwb_A 4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGV 82 (334)
T ss_dssp -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTC
T ss_pred CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCC
Confidence 367789998887766677799999999999999999999999999999999998776 3579999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEec-cCceEECCCCCCccc---c
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPLDA---T 161 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~-~~~v~~iP~~~~~~~---a 161 (361)
++|++||||++ ...|+|+||+.++ ++.++++|+++++++ |
T Consensus 83 ~~~~~GdrV~~------------------------------------~~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~a 126 (334)
T 3qwb_A 83 TNFEVGDQVAY------------------------------------ISNSTFAQYSKISSQGPVMKLPKGTSDEELKLY 126 (334)
T ss_dssp CSCCTTCEEEE------------------------------------ECSSCSBSEEEEETTSSEEECCTTCCHHHHHHH
T ss_pred CCCCCCCEEEE------------------------------------eeCCcceEEEEecCcceEEECCCCCCHHHhhhh
Confidence 99999999974 2479999999999 999999999999999 8
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH-
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD- 239 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~- 239 (361)
+++++...|||+++.+..++++|++|||+|+ |++|++++|+|+..|++|++++++++++. +++++|++.++++.+++
T Consensus 127 a~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~~~~~~~~ 205 (334)
T 3qwb_A 127 AAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYGAEYLINASKEDI 205 (334)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTTSCH
T ss_pred hhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCcEEEeCCCchH
Confidence 8899999999999998888999999999995 99999999999999999999999877764 66899999999887644
Q ss_pred --HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEeccc----CCHHH--
Q 018094 240 --EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMI----GGMKE-- 308 (361)
Q Consensus 240 --~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~----~~~~~-- 308 (361)
.+.+.++ ++|++||++|+. .+..++++++++|+++.+|...+.. .++...++.|++++.++.. .+..+
T Consensus 206 ~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
T 3qwb_A 206 LRQVLKFTNGKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWK 284 (334)
T ss_dssp HHHHHHHTTTSCEEEEEECCGGG-GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHH
T ss_pred HHHHHHHhCCCCceEEEECCChH-HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHH
Confidence 4445543 799999999985 4999999999999999999876543 6777778889999997543 23333
Q ss_pred --HHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 309 --TQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 309 --~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
++++++++++|++++.+ ++|+++++++||+.+++++..||+|+++++
T Consensus 285 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q 334 (334)
T 3qwb_A 285 YYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ 334 (334)
T ss_dssp HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred HHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 46889999999999887 899999999999999999999999999863
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-52 Score=387.80 Aligned_cols=311 Identities=23% Similarity=0.322 Sum_probs=264.6
Q ss_pred CCCcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeC
Q 018094 4 APEQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVG 82 (361)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG 82 (361)
+.++|.+|+++.+..++.|+.+++.++|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|
T Consensus 15 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG 94 (342)
T 4eye_A 15 QTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAP 94 (342)
T ss_dssp ---CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECC
T ss_pred cccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEEC
Confidence 344677888888877777888999999999999999999999999999999999987653 3789999999999999999
Q ss_pred CCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccccc
Q 018094 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA 162 (361)
Q Consensus 83 ~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa 162 (361)
++++ |++||||++. ...|+|+||+.++++.++++|+++++++||
T Consensus 95 ~~v~-~~vGDrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa 138 (342)
T 4eye_A 95 EGSG-IKPGDRVMAF-----------------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAV 138 (342)
T ss_dssp TTSS-CCTTCEEEEE-----------------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHH
T ss_pred CCCC-CCCCCEEEEe-----------------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHH
Confidence 9999 9999999742 357999999999999999999999999999
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC--HH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--QD 239 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~~ 239 (361)
++++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|++|++++++++++ ++++++|++.++++.. .+
T Consensus 139 ~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~ga~~v~~~~~~~~~ 217 (342)
T 4eye_A 139 ALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSVGADIVLPLEEGWAK 217 (342)
T ss_dssp HHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEEEESSTTHHH
T ss_pred HhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCCcEEecCchhHHH
Confidence 999999999999988888999999999998 9999999999999999999999988776 5568899999988772 13
Q ss_pred HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCH---------H
Q 018094 240 EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGM---------K 307 (361)
Q Consensus 240 ~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~---------~ 307 (361)
.+.+.++ ++|++|||+|+.. +..++++++++|+++.+|...+. ..++...++.+++++.|+...+. +
T Consensus 218 ~v~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 296 (342)
T 4eye_A 218 AVREATGGAGVDMVVDPIGGPA-FDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYE 296 (342)
T ss_dssp HHHHHTTTSCEEEEEESCC--C-HHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHH
T ss_pred HHHHHhCCCCceEEEECCchhH-HHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHH
Confidence 4445554 6999999999975 99999999999999999976543 35565667889999999875332 4
Q ss_pred HHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 308 ETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 308 ~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.++.+++++++| +++.+ ++|+++++++||+.+.+++..||+|+++
T Consensus 297 ~~~~~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 297 TQAGLEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp HHHHHHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 688899999999 88887 8999999999999999999999999973
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-52 Score=383.21 Aligned_cols=308 Identities=21% Similarity=0.211 Sum_probs=264.9
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCC-----CCCCCCCcccccccEEEEEeCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEW-----GNAIYPIVPGHEIVGVVTEVGSK 84 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~-----~~~~~p~~lG~e~~G~V~~vG~~ 84 (361)
+|+++.+...+.++.+++.++|.|+|+++||||||+++|||++|++.+.|.. ....+|.++|||++|+|+++|++
T Consensus 6 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG~~ 85 (321)
T 3tqh_A 6 EMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSD 85 (321)
T ss_dssp EEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEECTT
T ss_pred cceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeCCC
Confidence 5778877766667779999999999999999999999999999999988831 23467899999999999999999
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccccccc
Q 018094 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (361)
Q Consensus 85 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l 164 (361)
+++|++||||++.+.. ....|+|+||+.+|++.++++|+++++++||++
T Consensus 86 v~~~~~GdrV~~~~~~-------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 134 (321)
T 3tqh_A 86 VNNVNIGDKVMGIAGF-------------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAASL 134 (321)
T ss_dssp CCSCCTTCEEEEECST-------------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHHHS
T ss_pred CCCCCCCCEEEEccCC-------------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHhhh
Confidence 9999999999764310 034699999999999999999999999999999
Q ss_pred chhhhhhhHHHHhhCCCCCCCEEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHH
Q 018094 165 LCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA 243 (361)
Q Consensus 165 ~~~~~~a~~~l~~~~~~~~g~~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 243 (361)
++++.|||+++ +..++++|++|||+| +|++|++++|+|+.+|++|+++++ +++ .++++++|+++++++.+.+...+
T Consensus 135 ~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~-~~~-~~~~~~lGa~~~i~~~~~~~~~~ 211 (321)
T 3tqh_A 135 PTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS-KRN-HAFLKALGAEQCINYHEEDFLLA 211 (321)
T ss_dssp HHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC-HHH-HHHHHHHTCSEEEETTTSCHHHH
T ss_pred hhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec-cch-HHHHHHcCCCEEEeCCCcchhhh
Confidence 99999999999 667799999999998 599999999999999999998874 344 56779999999999887663444
Q ss_pred hcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEec-ccCCHHHHHHHHHHHHcCCCc
Q 018094 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGS-MIGGMKETQEMIDFAAKHNIR 322 (361)
Q Consensus 244 ~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~-~~~~~~~~~~~~~~l~~~~l~ 322 (361)
...++|++||++|+.. ...++++++++|+++.+|....... ...+..+++++.++ ...+.++++++++++++|+++
T Consensus 212 ~~~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~ 288 (321)
T 3tqh_A 212 ISTPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGRV--IEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLR 288 (321)
T ss_dssp CCSCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHHH--HHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSC
T ss_pred hccCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchhh--hhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcc
Confidence 4478999999999987 6899999999999999986543221 22456789999985 345678899999999999999
Q ss_pred eee-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 323 ADI-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 323 ~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
+.+ ++|+++++++||+.+++++..||+|++++
T Consensus 289 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 289 IEISRIFQLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp CCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred cccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 887 89999999999999999999999999874
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=380.67 Aligned_cols=311 Identities=19% Similarity=0.249 Sum_probs=266.0
Q ss_pred ccccceecccC---CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 10 PKNAFGWAARD---TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 10 ~~~~~~~~~~~---~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
+|+++.+..++ +++.+++.++|.|+|+++||+|||++++||++|++.+.|. ...+|.++|||++|+|+++|++++
T Consensus 2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v~ 79 (346)
T 3fbg_A 2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVT 79 (346)
T ss_dssp CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTCC
T ss_pred CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCCC
Confidence 47888887665 6788999999999999999999999999999999998876 346899999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccch
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~ 166 (361)
+|++||||+... .....|+|+||+.+|++.++++|+++++++||++++
T Consensus 80 ~~~~GdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~ 127 (346)
T 3fbg_A 80 MFNQGDIVYYSG--------------------------------SPDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPL 127 (346)
T ss_dssp SCCTTCEEEECC--------------------------------CTTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHH
T ss_pred cCCCCCEEEEcC--------------------------------CCCCCcceeEEEEEChHHeEECCCCCCHHHhhhcch
Confidence 999999997521 123579999999999999999999999999999999
Q ss_pred hhhhhhHHHHhhCCCC------CCCEEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH-
Q 018094 167 AGITVYSPLRFYGLDK------PGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ- 238 (361)
Q Consensus 167 ~~~~a~~~l~~~~~~~------~g~~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~- 238 (361)
++.|||+++....+++ +|++|||+| +|++|++++|+|+.+|++|++++++++++ ++++++|+++++++.+.
T Consensus 128 ~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~ 206 (346)
T 3fbg_A 128 TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-EWTKKMGADIVLNHKESL 206 (346)
T ss_dssp HHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-HHHHHHTCSEEECTTSCH
T ss_pred hHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCCcEEEECCccH
Confidence 9999999998888888 999999996 59999999999999999999999887775 55588999999988652
Q ss_pred -HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC-----------
Q 018094 239 -DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG----------- 305 (361)
Q Consensus 239 -~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~----------- 305 (361)
+.+.+..+ ++|++|||+|+...+..++++++++|+++.++... ..++...+..+++++.++....
T Consensus 207 ~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (346)
T 3fbg_A 207 LNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIK 284 (346)
T ss_dssp HHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHH
T ss_pred HHHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEEEEEecccccchhhHHH
Confidence 34444433 79999999998876799999999999999997543 3455566778999999875532
Q ss_pred -HHHHHHHHHHHHcCCCceee-EEE---ecccHHHHHHHHHcCCCcEEEEEEeCCcc
Q 018094 306 -MKETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVIDVANTM 357 (361)
Q Consensus 306 -~~~~~~~~~~l~~~~l~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~~~~~~ 357 (361)
.+.++++++++++|++++.+ ++| +++++++||+.+++++..||+|++++++.
T Consensus 285 ~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~~ 341 (346)
T 3fbg_A 285 HHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEGH 341 (346)
T ss_dssp HHHHHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC----
T ss_pred HHHHHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCcc
Confidence 24578899999999999887 677 89999999999999999999999998764
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-52 Score=390.99 Aligned_cols=328 Identities=20% Similarity=0.250 Sum_probs=270.7
Q ss_pred cccceecccCCCCCccceeeeccCCCC-CeEEEEEeeeccccchhhhhhC--CCCCCCC---CCcccccccEEEEEeCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGE-KDVTFKVTHCGICHSDLHLIKN--EWGNAIY---PIVPGHEIVGVVTEVGSK 84 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~-~~vlV~v~~~~i~~~D~~~~~g--~~~~~~~---p~~lG~e~~G~V~~vG~~ 84 (361)
|+++.+...+. .++++++|.|+|++ +||+|||+++|||++|++.+.| .++...+ |.++|||++|+|++ ++
T Consensus 1 MkA~~~~~~g~--~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~ 76 (366)
T 2cdc_A 1 MKAIIVKPPNA--GVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY 76 (366)
T ss_dssp CEEEEECTTSC--CCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC
T ss_pred CeEEEEeCCCC--ceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC
Confidence 45666544332 38889999999999 9999999999999999999988 5543456 89999999999999 77
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcc-cCCccceEEEeccCceEECCCCCCcccccc
Q 018094 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTI-TYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 85 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
++|++||||++.+.. .|++|.+|++|.+++|++..... .|.. ..|+|+||+.+|++.++++|++++ ++| +
T Consensus 77 -~~~~~GDrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~-----~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~A-a 147 (366)
T 2cdc_A 77 -HGFSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGE-----AGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIG-I 147 (366)
T ss_dssp -SSCCTTCEEEECSEE-CCSSSHHHHTTCGGGCSSSCCEE-----ETTBEECCSCBSEEEECGGGEEEECGGGT-TTG-G
T ss_pred -CCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCccc-----CCccCCCCceeEEEEechHHeEECcCCcc-hhh-h
Confidence 889999999887765 89999999999999999754321 0222 569999999999999999999999 776 4
Q ss_pred cchhhhhhhHHHH--h--hCCCC--C-------CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHc
Q 018094 164 LLCAGITVYSPLR--F--YGLDK--P-------GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERL 227 (361)
Q Consensus 164 l~~~~~~a~~~l~--~--~~~~~--~-------g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~---~~~~~~~~~~ 227 (361)
++.++.|||+++. . ..+++ + |++|||+|+|++|++++|+|+.+|++|+++++++ ++. ++++++
T Consensus 148 l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~~~ 226 (366)
T 2cdc_A 148 LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIEET 226 (366)
T ss_dssp GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHHHH
T ss_pred hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHHHh
Confidence 7788999999998 4 56678 8 9999999999999999999999999999999887 665 566899
Q ss_pred CCcEEecCCC--HHHHHHhcCCccEEEEcCCCcccH-HHHHHhhccCCEEEEecCCCCC-cccChHH---HhhCCcEEEe
Q 018094 228 GADSFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPL-MPLIGLLKSQGKLVLVGAPEKP-LELPAFS---LLMGRKIVGG 300 (361)
Q Consensus 228 g~~~v~~~~~--~~~~~~~~~g~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~~~i~g 300 (361)
|++.+ + .+ .+.+.+..+++|++||++|....+ +.++++++++|+++.+|..... ..++... ++.+++++.|
T Consensus 227 ga~~v-~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g 304 (366)
T 2cdc_A 227 KTNYY-N-SSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIG 304 (366)
T ss_dssp TCEEE-E-CTTCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEE
T ss_pred CCcee-c-hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEE
Confidence 99887 6 44 123333225899999999997667 8999999999999999986654 5666666 8889999999
Q ss_pred cccCCHHHHHHHHHHHHcCC------Cceee-EEEecccHHHHHHHH-HcCCCcEEEEEEeC
Q 018094 301 SMIGGMKETQEMIDFAAKHN------IRADI-EVIPADYVNTALERL-AKADVRYRFVIDVA 354 (361)
Q Consensus 301 ~~~~~~~~~~~~~~~l~~~~------l~~~~-~~~~l~~~~~a~~~~-~~~~~~gkvvi~~~ 354 (361)
+...+.++++++++++++|+ +++.+ ++|+|+++++||+.+ .+++..||+|++++
T Consensus 305 ~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~ 366 (366)
T 2cdc_A 305 LVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE 366 (366)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred ecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence 98888899999999999998 55666 899999999999994 34666899999874
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=379.26 Aligned_cols=308 Identities=23% Similarity=0.296 Sum_probs=268.9
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
||+++.+..++.|+.+++.++|.|+|+++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 1 MMkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~ 80 (325)
T 3jyn_A 1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK 80 (325)
T ss_dssp CEEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 48888888777788899999999999999999999999999999999999887667899999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.. ...|+|+||+.+|++.++++|+++++++||++++...
T Consensus 81 ~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ 126 (325)
T 3jyn_A 81 VGDRVAYGT----------------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGL 126 (325)
T ss_dssp TTCEEEESS----------------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEEec----------------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHH
Confidence 999997521 3579999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
|||+++.+..++++|++|||+|+ |++|++++|+|+..|++|+++++++++.+ .++++|+++++++.+.+ .+.+.+
T Consensus 127 ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~Ga~~~~~~~~~~~~~~~~~~~ 205 (325)
T 3jyn_A 127 TVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAKALGAWETIDYSHEDVAKRVLELT 205 (325)
T ss_dssp HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcCCCEEEeCCCccHHHHHHHHh
Confidence 99999999888999999999995 99999999999999999999999887764 55899999999887654 444555
Q ss_pred C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhC-CcEEEecc----cCCHHH----HHHHH
Q 018094 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMG-RKIVGGSM----IGGMKE----TQEMI 313 (361)
Q Consensus 246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~i~g~~----~~~~~~----~~~~~ 313 (361)
+ ++|++||++|+. .+..++++++++|+++.+|...+.. .++...+..+ ++.+.+.. ..+.++ +++++
T Consensus 206 ~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
T 3jyn_A 206 DGKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELF 284 (325)
T ss_dssp TTCCEEEEEESSCGG-GHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHH
T ss_pred CCCCceEEEECCChH-HHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHH
Confidence 4 799999999985 4999999999999999999876543 5677777666 67776532 223333 45889
Q ss_pred HHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 314 DFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 314 ~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++|++++.+ ++|+++++++||+.+.+++..||+|+.+
T Consensus 285 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 285 DMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp HHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEEC
T ss_pred HHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 999999999887 9999999999999999999999999863
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-51 Score=381.46 Aligned_cols=310 Identities=18% Similarity=0.239 Sum_probs=266.6
Q ss_pred ccccceeccc---CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 10 PKNAFGWAAR---DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 10 ~~~~~~~~~~---~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
+|+++.+..+ ++|+.+++.++|.|+|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|++++
T Consensus 22 ~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~ 101 (363)
T 4dvj_A 22 SMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVT 101 (363)
T ss_dssp EEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCC
T ss_pred eeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCC
Confidence 5777777665 4578899999999999999999999999999999999999877668899999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccch
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~ 166 (361)
+|++||||+... +....|+|+||+.+|++.++++|+++++++||++++
T Consensus 102 ~~~vGdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~ 149 (363)
T 4dvj_A 102 LFRPGDEVFYAG--------------------------------SIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPL 149 (363)
T ss_dssp SCCTTCEEEECC--------------------------------CTTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTSHH
T ss_pred CCCCCCEEEEcc--------------------------------CCCCCccceEEEEeCHHHeeECCCCCCHHHHHhhhh
Confidence 999999997421 124579999999999999999999999999999999
Q ss_pred hhhhhhHHHHhhCCCC-----CCCEEEEEcc-chHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH-
Q 018094 167 AGITVYSPLRFYGLDK-----PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ- 238 (361)
Q Consensus 167 ~~~~a~~~l~~~~~~~-----~g~~VlI~Ga-g~vG~~a~~la~~-~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~- 238 (361)
++.|||+++.+..+++ +|++|||+|+ |++|++++|+||. .|++|++++++++++ ++++++|+++++++.++
T Consensus 150 ~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-~~~~~lGad~vi~~~~~~ 228 (363)
T 4dvj_A 150 TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-EWVKSLGAHHVIDHSKPL 228 (363)
T ss_dssp HHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHTTCSEEECTTSCH
T ss_pred HHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHHHcCCCEEEeCCCCH
Confidence 9999999998888888 8999999995 9999999999998 588999999987776 45589999999998652
Q ss_pred -HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC-----------
Q 018094 239 -DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG----------- 305 (361)
Q Consensus 239 -~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~----------- 305 (361)
+.+.++.+ ++|+||||+|+...+..++++++++|+++.+|.. ..++...+..|++++.++...+
T Consensus 229 ~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~ 305 (363)
T 4dvj_A 229 AAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSE 305 (363)
T ss_dssp HHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHH
T ss_pred HHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEeeccccccCcchhh
Confidence 33444433 7999999999876689999999999999999643 3566667788999999876543
Q ss_pred -HHHHHHHHHHHHcCCCceee-EEE---ecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 306 -MKETQEMIDFAAKHNIRADI-EVI---PADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 306 -~~~~~~~~~~l~~~~l~~~~-~~~---~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
.+.++++++++++|++++.+ +++ +++++++||+.+.+++..||+|+++..
T Consensus 306 ~~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~ 360 (363)
T 4dvj_A 306 QGRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG 360 (363)
T ss_dssp HHHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred HHHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence 24578999999999999877 566 999999999999999999999999864
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=383.69 Aligned_cols=313 Identities=21% Similarity=0.280 Sum_probs=263.6
Q ss_pred CcccccccceecccCCC-CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCC-CCCCcccccccEEEEEeCC
Q 018094 6 EQEHPKNAFGWAARDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGS 83 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~lG~e~~G~V~~vG~ 83 (361)
.||.+|+++.+...+.| ..+++.++|.|+|+++||+|||.++|||++|++.+.|.++.. .+|.++|||++|+|+++|+
T Consensus 22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~ 101 (357)
T 1zsy_A 22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS 101 (357)
T ss_dssp CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence 46667887777544332 127888999999999999999999999999999999876542 5789999999999999999
Q ss_pred CCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 84 KVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 84 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
++++|++||||++.+ ...|+|+||+.+|++.++++|+++++++||+
T Consensus 102 ~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~ 147 (357)
T 1zsy_A 102 NVTGLKPGDWVIPAN----------------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAAT 147 (357)
T ss_dssp TCCSCCTTCEEEESS----------------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHH
T ss_pred CCCCCCCCCEEEEcC----------------------------------CCCccceeEEecCHHHcEECCCCCCHHHHhh
Confidence 999999999997522 1369999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHcCCcEEecCCCH-
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSFLVSRDQ- 238 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~---~~~~~~~~g~~~v~~~~~~- 238 (361)
+++.+.|||+++.+.+++++|++|||+|+ |++|++++|+||.+|++++++++.+++ +.++++++|+++++++.+.
T Consensus 148 l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~ 227 (357)
T 1zsy_A 148 LGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELR 227 (357)
T ss_dssp TTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHH
T ss_pred hcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCcch
Confidence 99989999999988888999999999998 999999999999999999888876542 3466789999999886432
Q ss_pred -HHHHHhcC---CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC-CCcccChHHHhhCCcEEEecccCC--------
Q 018094 239 -DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE-KPLELPAFSLLMGRKIVGGSMIGG-------- 305 (361)
Q Consensus 239 -~~~~~~~~---g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~-------- 305 (361)
+.+.+.++ ++|+|||++|+.. ...++++++++|+++.+|... ....++...++.|++++.|++...
T Consensus 228 ~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 306 (357)
T 1zsy_A 228 RPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPD 306 (357)
T ss_dssp SGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCHH
T ss_pred HHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCHH
Confidence 23334433 5999999999876 567999999999999998654 345677777888999999986532
Q ss_pred --HHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 306 --MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 306 --~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.+.++++++++++|++++.+ ++|+++++++||+.+.+++..||+|+++
T Consensus 307 ~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 307 QFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp HHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 23578899999999999877 9999999999999999888889999974
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-52 Score=382.71 Aligned_cols=301 Identities=17% Similarity=0.263 Sum_probs=243.8
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+|+++.+.. .++.+++.++|.|+|+++||+|||++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 4 tMka~~~~~--~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 81 (315)
T 3goh_A 4 QHQVWAYQT--KTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKM 81 (315)
T ss_dssp EEEEEEEET--TTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGG
T ss_pred ceEEEEEeC--CCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCC
Confidence 577777643 678899999999999999999999999999999999999877678899999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+ +....|+|+||+.+|++.++++|+++++++||++++++.
T Consensus 82 vGdrV~~~~--------------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 129 (315)
T 3goh_A 82 LGRRVAYHT--------------------------------SLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLL 129 (315)
T ss_dssp TTCEEEEEC--------------------------------CTTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHH
T ss_pred CCCEEEEeC--------------------------------CCCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHH
Confidence 999998643 224579999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
|||+++ +..++++|++|||+|+|++|++++|+||.+|++|++++ +++++ ++++++|++++++ + ..++.+++|
T Consensus 130 ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~-~~~~~lGa~~v~~--d---~~~v~~g~D 201 (315)
T 3goh_A 130 TAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQ-ALAAKRGVRHLYR--E---PSQVTQKYF 201 (315)
T ss_dssp HHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCH-HHHHHHTEEEEES--S---GGGCCSCEE
T ss_pred HHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhH-HHHHHcCCCEEEc--C---HHHhCCCcc
Confidence 999999 77889999999999999999999999999999999999 66665 5568999999884 2 233355899
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChH--HHhhCCcEEEeccc-CCH-------HHHHHHHHHHHcC
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF--SLLMGRKIVGGSMI-GGM-------KETQEMIDFAAKH 319 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~~~~~~~~i~g~~~-~~~-------~~~~~~~~~l~~~ 319 (361)
++|||+|+.. ...++++++++|+++.+|.......++.. .+..+++++.++.. .+. +.++++++++++|
T Consensus 202 vv~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 280 (315)
T 3goh_A 202 AIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQG 280 (315)
T ss_dssp EEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCchh-HHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCC
Confidence 9999999977 68899999999999999764432222211 12223333333332 222 2467899999999
Q ss_pred CCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 320 NIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 320 ~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
++++.+ ++|+++++++||+.+. +..||+|+++++
T Consensus 281 ~l~~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~ 315 (315)
T 3goh_A 281 KMEIAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE 315 (315)
T ss_dssp SSCCCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred CcccccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence 999887 9999999999999998 667999999864
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-51 Score=376.12 Aligned_cols=312 Identities=15% Similarity=0.175 Sum_probs=262.3
Q ss_pred ccccccceecccCCC-CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCC
Q 018094 8 EHPKNAFGWAARDTS-GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
+.+|+++.+..++.| +.++++++|.|+|+++||+|||+++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 2 ~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v 81 (340)
T 3gms_A 2 SLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFV 81 (340)
T ss_dssp CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTS
T ss_pred CcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCC
Confidence 346788887766655 55889999999999999999999999999999999997764 4789999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
++|++||||+. ....|+|+||+.+|++.++++|+++++++||+++
T Consensus 82 ~~~~vGdrV~~-----------------------------------~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~ 126 (340)
T 3gms_A 82 SRELIGKRVLP-----------------------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMY 126 (340)
T ss_dssp CGGGTTCEEEE-----------------------------------CSSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSS
T ss_pred CCCCCCCEEEe-----------------------------------cCCCccceeEEEcCHHHeEECCCCCCHHHHhhhc
Confidence 99999999973 2357999999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HH
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EM 241 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~ 241 (361)
+..+|||+++.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++.. .++++|+++++++.+.+ .+
T Consensus 127 ~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lga~~~~~~~~~~~~~~~ 205 (340)
T 3gms_A 127 INPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE-ELLRLGAAYVIDTSTAPLYETV 205 (340)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHTCSEEEETTTSCHHHHH
T ss_pred chHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhCCCcEEEeCCcccHHHHH
Confidence 999999999988888999999999998 69999999999999999999999888764 55889999999886643 44
Q ss_pred HHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHh-hCCcEEEeccc----------CCHHH
Q 018094 242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL-MGRKIVGGSMI----------GGMKE 308 (361)
Q Consensus 242 ~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~g~~~----------~~~~~ 308 (361)
.+.++ ++|++|||+|+.. ...++++++++|+++.+|...+. .++...+. ..++.+..+.. ...++
T Consensus 206 ~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (340)
T 3gms_A 206 MELTNGIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQET 283 (340)
T ss_dssp HHHTTTSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHH
T ss_pred HHHhCCCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHH
Confidence 45554 7999999999887 66777999999999999986542 33433333 34555555432 12357
Q ss_pred HHHHHHHHHcCCCcee-e-EEEecccHHHHHHHHHcCCC-cEEEEEEeCCcc
Q 018094 309 TQEMIDFAAKHNIRAD-I-EVIPADYVNTALERLAKADV-RYRFVIDVANTM 357 (361)
Q Consensus 309 ~~~~~~~l~~~~l~~~-~-~~~~l~~~~~a~~~~~~~~~-~gkvvi~~~~~~ 357 (361)
++++++++++|++++. + ++|+++++++||+.+++++. .||+++++.++.
T Consensus 284 ~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~~~ 335 (340)
T 3gms_A 284 FRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYEGH 335 (340)
T ss_dssp HHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC---
T ss_pred HHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEeccc
Confidence 8999999999999873 4 89999999999999999984 599999998763
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-51 Score=381.41 Aligned_cols=315 Identities=16% Similarity=0.197 Sum_probs=261.1
Q ss_pred CCCCCCcccccccceec--cc-CCCCCccceee---------eccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCC
Q 018094 1 MGQAPEQEHPKNAFGWA--AR-DTSGVLSPFHF---------SRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYP 67 (361)
Q Consensus 1 m~~~~~~~~~~~~~~~~--~~-~~~~~l~~~~~---------~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p 67 (361)
|++ -++|.+|+++.+. .+ ++++.+++.++ |.|+|+++||+|||++++||++|++.+.|.++. ..+|
T Consensus 2 Ms~-m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p 80 (349)
T 3pi7_A 2 MSP-MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG 80 (349)
T ss_dssp ----CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred CCC-CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence 453 3467778888886 33 46788989998 999999999999999999999999999997653 3689
Q ss_pred CcccccccEEEEEeCCCC-CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEecc
Q 018094 68 IVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE 146 (361)
Q Consensus 68 ~~lG~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~ 146 (361)
.++|||++|+|+++|+++ ++|++||||++.. +....|+|+||+.+|+
T Consensus 81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------g~~~~G~~aey~~v~~ 128 (349)
T 3pi7_A 81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT--------------------------------GLSNWGSWAEYAVAEA 128 (349)
T ss_dssp SBCCSEEEEEEEEECSSHHHHHHTTCEEEEEC--------------------------------TTSSCCSSBSEEEEEG
T ss_pred CCccceEEEEEEEECCCccCCCCCCCEEEEec--------------------------------cCCCCccceeeEeech
Confidence 999999999999999999 9999999998532 2346899999999999
Q ss_pred CceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCC-CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHH
Q 018094 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI 224 (361)
Q Consensus 147 ~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g-~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~ 224 (361)
+.++++|+++++++||++++..+|||+++.... ++| ++|||+|+ |++|++++|+|+.+|++|+++++++++++ .+
T Consensus 129 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~ 205 (349)
T 3pi7_A 129 AACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA-LL 205 (349)
T ss_dssp GGEEECCTTCCC--GGGSSHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH-HH
T ss_pred HHeEECCCCCCHHHHhhccccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HH
Confidence 999999999999999999999999997766554 566 78888865 99999999999999999999998887764 55
Q ss_pred HHcCCcEEecCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccCh-HHHhhCCcE
Q 018094 225 ERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPA-FSLLMGRKI 297 (361)
Q Consensus 225 ~~~g~~~v~~~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~-~~~~~~~~~ 297 (361)
+++|+++++++++++. +.+.++ ++|++|||+|+.. +..++++++++|+++.+|.... ...++. ..++.|+++
T Consensus 206 ~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~ 284 (349)
T 3pi7_A 206 KDIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKH 284 (349)
T ss_dssp HHHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCE
T ss_pred HHcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccE
Confidence 8999999999876543 444443 7999999999876 7889999999999999996543 456666 778889999
Q ss_pred EEecccCC---------HHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 298 VGGSMIGG---------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 298 i~g~~~~~---------~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.|++..+ .+.++++++++++|++++.+ ++|+++++++||+.+ +++..||+|+++
T Consensus 285 i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~-~~~~~gKvvl~p 349 (349)
T 3pi7_A 285 IEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVPAE-LTKPNGKVFIRP 349 (349)
T ss_dssp EEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHHHH-HTSSSSCEEEEC
T ss_pred EEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHHHH-hCCCCceEEEeC
Confidence 99987653 35678888999999998887 999999999999954 455679999974
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=376.50 Aligned_cols=312 Identities=20% Similarity=0.254 Sum_probs=263.7
Q ss_pred CcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCC-CCCCcccccccEEEEEeCCC
Q 018094 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGSK 84 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~lG~e~~G~V~~vG~~ 84 (361)
+++.+|+++.+...+.+..++++++|.|+|+++||+|||.++|||++|++...|.++.. .+|.++|||++|+|+++|++
T Consensus 18 ~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~ 97 (354)
T 2j8z_A 18 LYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG 97 (354)
T ss_dssp ---CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred cchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence 45667888777655555678889999999999999999999999999999999876543 47899999999999999999
Q ss_pred C-CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccc
Q 018094 85 V-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAP 163 (361)
Q Consensus 85 ~-~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~ 163 (361)
+ ++|++||||+.. ...|+|+||+.+|++.++++|+++++++||+
T Consensus 98 v~~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~ 142 (354)
T 2j8z_A 98 CQGHWKIGDTAMAL-----------------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAA 142 (354)
T ss_dssp C--CCCTTCEEEEE-----------------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTT
T ss_pred cCCCCCCCCEEEEe-----------------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHh
Confidence 9 999999999742 2469999999999999999999999999999
Q ss_pred cchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---
Q 018094 164 LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--- 239 (361)
Q Consensus 164 l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~--- 239 (361)
+++++.|||+++....++++|++|||+|+ |++|++++|+++..|++|+++++++++...+ +++|++.++++.+.+
T Consensus 143 l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~ 221 (354)
T 2j8z_A 143 IPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAAAGFNYKKEDFSE 221 (354)
T ss_dssp SHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHHH
T ss_pred ccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChHHHH
Confidence 99999999999987788999999999996 9999999999999999999999888776554 889999888876643
Q ss_pred HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccCh-HHHhhCCcEEEecccCCH--H------
Q 018094 240 EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPA-FSLLMGRKIVGGSMIGGM--K------ 307 (361)
Q Consensus 240 ~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~~~~~~~i~g~~~~~~--~------ 307 (361)
.+.+.++ ++|++||++|+. .+..++++++++|+++.+|...+. ..++. ..++.+++++.|+...+. .
T Consensus 222 ~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 300 (354)
T 2j8z_A 222 ATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLV 300 (354)
T ss_dssp HHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHH
T ss_pred HHHHHhcCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHH
Confidence 3444443 799999999987 489999999999999999976543 46777 777889999999865432 1
Q ss_pred -H-HHHHHHHHHcC---CCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 308 -E-TQEMIDFAAKH---NIRADI-EVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 308 -~-~~~~~~~l~~~---~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
. ++++++++++| ++++.+ ++|+++++++||+.+.+++..||+|++++
T Consensus 301 ~~~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 353 (354)
T 2j8z_A 301 NAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP 353 (354)
T ss_dssp HHHHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred HHHHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 1 23577888999 888877 89999999999999999888899999875
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-51 Score=378.44 Aligned_cols=307 Identities=21% Similarity=0.343 Sum_probs=256.4
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
+|+++++...+.+..+++.++|.|+|+++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|
T Consensus 3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (349)
T 4a27_A 3 EMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGY 82 (349)
T ss_dssp CEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSC
T ss_pred eeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCC
Confidence 578888776666668999999999999999999999999999999999997653 4789999999999999999999999
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhh
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
++||||+. ....|+|+||+.+|+++++++|+++++++||++++++
T Consensus 83 ~~GdrV~~-----------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~ 127 (349)
T 4a27_A 83 EIGDRVMA-----------------------------------FVNYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNF 127 (349)
T ss_dssp CTTCEEEE-----------------------------------ECSSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHH
T ss_pred CCCCEEEE-----------------------------------ecCCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHH
Confidence 99999974 2356999999999999999999999999999999999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEEecCCCH---HHHHH
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQ---DEMQA 243 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~ 243 (361)
.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+| ++|++++ ++++. +.++ +|++++++ .+. +.+.+
T Consensus 128 ~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~-~~~~-~ga~~~~~-~~~~~~~~~~~ 203 (349)
T 4a27_A 128 VTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKH-EAIK-DSVTHLFD-RNADYVQEVKR 203 (349)
T ss_dssp HHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGH-HHHG-GGSSEEEE-TTSCHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHH-HHHH-cCCcEEEc-CCccHHHHHHH
Confidence 999999988888999999999998 999999999999986 5888877 44454 4545 99999988 443 34445
Q ss_pred hcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-----------------cccChHHHhhCCcEEEecccCC
Q 018094 244 AMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-----------------LELPAFSLLMGRKIVGGSMIGG 305 (361)
Q Consensus 244 ~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~i~g~~~~~ 305 (361)
+++ ++|++|||+|+.. +..++++++++|+++.+|..... ..++...++.+++++.++....
T Consensus 204 ~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~ 282 (349)
T 4a27_A 204 ISAEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLN 282 (349)
T ss_dssp HCTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHH
T ss_pred hcCCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehh
Confidence 554 8999999999977 68999999999999999974311 1255566788999999976522
Q ss_pred -----------HHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 306 -----------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 306 -----------~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
.++++++++++++|++++.+ ++|+++++++||+.+.+++..||+|++++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~ 345 (349)
T 4a27_A 283 LLFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345 (349)
T ss_dssp HHHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred eeccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 56789999999999999887 8999999999999999999999999999875
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-50 Score=371.15 Aligned_cols=309 Identities=22% Similarity=0.341 Sum_probs=262.6
Q ss_pred ccccccceecccCCCCCccc-eeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCC
Q 018094 8 EHPKNAFGWAARDTSGVLSP-FHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~-~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
+.+|+++.+...+.+..+++ .++|.|+|+++||+|||.++|||++|++...|.++. ..+|.++|||++|+|+++|+++
T Consensus 27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v 106 (351)
T 1yb5_A 27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA 106 (351)
T ss_dssp -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence 44688888766666677888 799999999999999999999999999999887642 4678999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
++|++||||++.. ...|+|+||+.+|++.++++|+++++++||+++
T Consensus 107 ~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~ 152 (351)
T 1yb5_A 107 SAFKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAIG 152 (351)
T ss_dssp TTCCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTH
T ss_pred CCCCCCCEEEEeC----------------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhhh
Confidence 9999999997521 236999999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH---H
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE---M 241 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~---~ 241 (361)
+++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.. .++++|++.++++.+.+. +
T Consensus 153 ~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~ga~~~~d~~~~~~~~~~ 231 (351)
T 1yb5_A 153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNGAHEVFNHREVNYIDKI 231 (351)
T ss_dssp HHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTTCSEEEETTSTTHHHHH
T ss_pred hHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcCCCEEEeCCCchHHHHH
Confidence 999999999987888999999999998 99999999999999999999998887765 568999999888766543 3
Q ss_pred HHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEeccc--CCHHHHHH----HH
Q 018094 242 QAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI--GGMKETQE----MI 313 (361)
Q Consensus 242 ~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~----~~ 313 (361)
.+.++ ++|++||++|+.. +..++++++++|+++.+|.. +...++...++.+++++.|+.. .+.+++++ +.
T Consensus 232 ~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~ 309 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEMLANVN-LSKDLSLLSHGGRVIVVGSR-GTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQ 309 (351)
T ss_dssp HHHHCTTCEEEEEESCHHHH-HHHHHHHEEEEEEEEECCCC-SCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHH
T ss_pred HHHcCCCCcEEEEECCChHH-HHHHHHhccCCCEEEEEecC-CCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHH
Confidence 34443 7999999999864 88999999999999999964 3455667778889999999843 34455544 55
Q ss_pred HHHHcCCCceee-EEEecccHHHHHHH-HHcCCCcEEEEEEe
Q 018094 314 DFAAKHNIRADI-EVIPADYVNTALER-LAKADVRYRFVIDV 353 (361)
Q Consensus 314 ~~l~~~~l~~~~-~~~~l~~~~~a~~~-~~~~~~~gkvvi~~ 353 (361)
+++.++++++.+ ++|+++++++||+. +++++..||+|+++
T Consensus 310 ~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 310 AGMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp HHHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred HHHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 577788999887 89999999999998 66667789999974
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-50 Score=369.78 Aligned_cols=310 Identities=19% Similarity=0.184 Sum_probs=258.5
Q ss_pred ccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC--CCCCCCcccccccEEEEEeCCCC
Q 018094 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG--NAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~--~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
|.+|+++.+...+.+ +++.++|.|+|+++||||||++++||++|++.+.|..+ ...+|.++|||++|+|+++|+++
T Consensus 5 ~~~mka~~~~~~~~~--l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v 82 (343)
T 3gaz_A 5 TPTMIAAVVEEANGP--FVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEV 82 (343)
T ss_dssp -CEEEEEEECSTTCC--EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTC
T ss_pred chhheEEEEecCCCc--eEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCC
Confidence 456777776544333 89999999999999999999999999999999988643 24688999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
++|++||||+... .+ .....|+|+||+.+|++.++++|+++++++||+++
T Consensus 83 ~~~~vGdrV~~~~------------~g------------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~ 132 (343)
T 3gaz_A 83 DSFRVGDAVFGLT------------GG------------------VGGLQGTHAQFAAVDARLLASKPAALTMRQASVLP 132 (343)
T ss_dssp CSCCTTCEEEEEC------------CS------------------STTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSH
T ss_pred CCCCCCCEEEEEe------------CC------------------CCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhh
Confidence 9999999997421 00 01247999999999999999999999999999999
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC--HHHHH
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--QDEMQ 242 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~ 242 (361)
+++.|||+++.+..++++|++|||+|+ |++|++++|+|+..|++|+++ .+++++ ++++++|++. ++... .+.+.
T Consensus 133 ~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~~lGa~~-i~~~~~~~~~~~ 209 (343)
T 3gaz_A 133 LVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVRDLGATP-IDASREPEDYAA 209 (343)
T ss_dssp HHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHHHHTSEE-EETTSCHHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHHHcCCCE-eccCCCHHHHHH
Confidence 999999999977888999999999995 999999999999999999998 666554 5668999988 66222 23444
Q ss_pred HhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCH-----------HHH
Q 018094 243 AAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGM-----------KET 309 (361)
Q Consensus 243 ~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----------~~~ 309 (361)
+.++ ++|++||++|+.. +..++++++++|+++.+|... .++...+..+++++.+++.... +++
T Consensus 210 ~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 285 (343)
T 3gaz_A 210 EHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEML 285 (343)
T ss_dssp HHHTTSCEEEEEESSCTHH-HHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHH
T ss_pred HHhcCCCceEEEECCCcHH-HHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHHH
Confidence 5554 7999999999854 899999999999999998754 3455677789999999765432 678
Q ss_pred HHHHHHHHcCCCceee--EEEecccHHHHHHHHHcCCC----cEEEEEEeCCc
Q 018094 310 QEMIDFAAKHNIRADI--EVIPADYVNTALERLAKADV----RYRFVIDVANT 356 (361)
Q Consensus 310 ~~~~~~l~~~~l~~~~--~~~~l~~~~~a~~~~~~~~~----~gkvvi~~~~~ 356 (361)
+++++++++|++++.+ ++|+++++++||+.+++++. +||+|++.+..
T Consensus 286 ~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~ 338 (343)
T 3gaz_A 286 READALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGH 338 (343)
T ss_dssp HHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC--
T ss_pred HHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEeccc
Confidence 9999999999999876 49999999999999998876 58999988754
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-50 Score=371.17 Aligned_cols=310 Identities=20% Similarity=0.226 Sum_probs=261.9
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCC--CC-CCCCCcccccccEEEEEeCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEW--GN-AIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~--~~-~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
+|+++.+...+.++.+++.++|.|+|+++||+|||.++|||++|++.+.|.+ .. ..+|.++|||++|+|+++|++++
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~ 80 (333)
T 1wly_A 1 MVMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVT 80 (333)
T ss_dssp -CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCC
T ss_pred CcEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCC
Confidence 3777777666666778899999999999999999999999999999998866 22 45789999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccc--cccc
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA--TAPL 164 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~--aa~l 164 (361)
+|++||||++.+ ...|+|+||+.+|++.++++|+++++++ ||++
T Consensus 81 ~~~~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l 126 (333)
T 1wly_A 81 DFTVGERVCTCL----------------------------------PPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGL 126 (333)
T ss_dssp SCCTTCEEEECS----------------------------------SSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHH
T ss_pred CCCCCCEEEEec----------------------------------CCCCcceeEEEecHHHcEeCCCCCChHHhCccch
Confidence 999999996421 1269999999999999999999999999 9999
Q ss_pred chhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---H
Q 018094 165 LCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---E 240 (361)
Q Consensus 165 ~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~ 240 (361)
++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++... ++++|++.++++.+.+ .
T Consensus 127 ~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~-~~~~g~~~~~d~~~~~~~~~ 205 (333)
T 1wly_A 127 MLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET-ARKLGCHHTINYSTQDFAEV 205 (333)
T ss_dssp HHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHTCSEEEETTTSCHHHH
T ss_pred hhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCCEEEECCCHHHHHH
Confidence 9999999999987788999999999997 999999999999999999999998777654 4789999888876543 3
Q ss_pred HHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChH-HHhhCC--cEEEecccC---CH----H
Q 018094 241 MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF-SLLMGR--KIVGGSMIG---GM----K 307 (361)
Q Consensus 241 ~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~g~~~~---~~----~ 307 (361)
+.+.++ ++|++||++|+ ..+..++++++++|+++.+|...+ ...++.. .++.|+ +++.|++.. +. +
T Consensus 206 i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 284 (333)
T 1wly_A 206 VREITGGKGVDVVYDSIGK-DTLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDE 284 (333)
T ss_dssp HHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHH
T ss_pred HHHHhCCCCCeEEEECCcH-HHHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHH
Confidence 444443 79999999998 459999999999999999997654 3456666 677888 999887541 32 3
Q ss_pred HHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 308 ETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 308 ~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
.++++++++++|++++.+ ++|+++++++||+.+++++..||+|+++++
T Consensus 285 ~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 333 (333)
T 1wly_A 285 GSKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA 333 (333)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred HHHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 688999999999999877 899999999999999998888999998753
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-51 Score=376.77 Aligned_cols=311 Identities=19% Similarity=0.229 Sum_probs=264.3
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+.|..++++++|.|+|+++||+|||++++||++|++.+.|.++. ..+|.++|||++|+|+++| +++|+
T Consensus 1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~ 78 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH 78 (324)
T ss_dssp CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence 67777777666777999999999999999999999999999999999997764 4789999999999999998 57899
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+ | ..+....|+|+||+.+|+++++++|+++++++||++++.+.
T Consensus 79 vGdrV~~~~----~-------------------------~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 129 (324)
T 3nx4_A 79 AGQEVLLTG----W-------------------------GVGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGF 129 (324)
T ss_dssp TTCEEEEEC----T-------------------------TBTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEcc----c-------------------------ccCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHH
Confidence 999998642 1 01334679999999999999999999999999999999999
Q ss_pred hhhHHHHhh--CCCCCCC-EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc
Q 018094 170 TVYSPLRFY--GLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~--~~~~~g~-~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 245 (361)
|||++++.. ..+++++ +|||+|+ |++|++++|+||.+|++|++++++++++ ++++++|+++++++++.+.+++++
T Consensus 130 ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~-~~~~~lGa~~vi~~~~~~~~~~~~ 208 (324)
T 3nx4_A 130 TAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH-GYLKSLGANRILSRDEFAESRPLE 208 (324)
T ss_dssp HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHHTCSEEEEGGGSSCCCSSC
T ss_pred HHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCCCEEEecCCHHHHHhhc
Confidence 999888633 3456532 4999998 9999999999999999999999988776 455899999999876644444444
Q ss_pred C-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCC------HHHHHHHHHHHH
Q 018094 246 G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGG------MKETQEMIDFAA 317 (361)
Q Consensus 246 ~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~l~ 317 (361)
+ ++|++||++|+. .+..++++++++|+++.+|...+. ..++...++.|++++.|+.... .+.++.++++++
T Consensus 209 ~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 287 (324)
T 3nx4_A 209 KQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLP 287 (324)
T ss_dssp CCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSC
T ss_pred CCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHH
Confidence 3 799999999987 599999999999999999987653 4666677888999999986432 245788889999
Q ss_pred cCCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 318 KHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 318 ~~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
+|++++..++|+++++++||+.+++++..||+|++++
T Consensus 288 ~g~l~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 288 ESFYAQAATEITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp HHHHHHHEEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred cCCCCCCceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 9988876789999999999999999999999999875
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-49 Score=370.20 Aligned_cols=317 Identities=15% Similarity=0.124 Sum_probs=255.6
Q ss_pred CCccc--ccccceecccCCCCCccce-eeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEe
Q 018094 5 PEQEH--PKNAFGWAARDTSGVLSPF-HFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEV 81 (361)
Q Consensus 5 ~~~~~--~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~v 81 (361)
++|+. +|+++++ ..++.+++. ++|.|+|+++||+|||++++||++|++.+.+. ..+|.++|||++|+|+++
T Consensus 4 ~tm~~p~~mkA~v~---~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~v 77 (371)
T 3gqv_A 4 QPFIPPPQQTALTV---NDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAV 77 (371)
T ss_dssp CCCCCCSCEEEEEE---CTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEE
T ss_pred CCCCCchhceeEEE---cCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEe
Confidence 34554 4555554 356789998 99999999999999999999999999988762 356899999999999999
Q ss_pred CCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccc
Q 018094 82 GSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT 161 (361)
Q Consensus 82 G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~a 161 (361)
|+++++|++||||+. .|..|..+ ....|+|+||+.+|++.++++|+++++++|
T Consensus 78 G~~v~~~~~GdrV~~--------~~~~~~~~-------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~a 130 (371)
T 3gqv_A 78 GSDVTHIQVGDRVYG--------AQNEMCPR-------------------TPDQGAFSQYTVTRGRVWAKIPKGLSFEQA 130 (371)
T ss_dssp CTTCCSCCTTCEEEE--------ECCTTCTT-------------------CTTCCSSBSEEECCTTCEEECCTTCCHHHH
T ss_pred CCCCCCCCCCCEEEE--------eccCCCCC-------------------CCCCCcCcCeEEEchhheEECCCCCCHHHH
Confidence 999999999999964 33344332 245799999999999999999999999999
Q ss_pred cccchhhhhhhHHHHhh-CCC-----------CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC
Q 018094 162 APLLCAGITVYSPLRFY-GLD-----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~-~~~-----------~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g 228 (361)
+.+++++.|||+++.+. .++ ++|++|||+|+ |++|++++|+|+.+|++|++++ ++++ .++++++|
T Consensus 131 a~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~-~~~~~~lG 208 (371)
T 3gqv_A 131 AALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN-FDLAKSRG 208 (371)
T ss_dssp HTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-HHHHHHTT
T ss_pred hhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH-HHHHHHcC
Confidence 99999999999999777 443 89999999998 9999999999999999999887 4555 46779999
Q ss_pred CcEEecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHHhh-ccCCEEEEecCCCC------Ccc---cChHHHhhC
Q 018094 229 ADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLVGAPEK------PLE---LPAFSLLMG 294 (361)
Q Consensus 229 ~~~v~~~~~~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~------~~~---~~~~~~~~~ 294 (361)
+++++++++++ .++++++ ++|++||++|+..++..+++++ +++|+++.+|.... ... .....++.|
T Consensus 209 a~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k 288 (371)
T 3gqv_A 209 AEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGE 288 (371)
T ss_dssp CSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTS
T ss_pred CcEEEECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccc
Confidence 99999987754 4555554 6999999999977789999999 59999999996442 111 122346778
Q ss_pred CcEEEecccC--CHH-------HHHHHHHHHHcCCCceee---EEEecccHHHHHHHHHcCCCcE-EEEEEeCCc
Q 018094 295 RKIVGGSMIG--GMK-------ETQEMIDFAAKHNIRADI---EVIPADYVNTALERLAKADVRY-RFVIDVANT 356 (361)
Q Consensus 295 ~~~i~g~~~~--~~~-------~~~~~~~~l~~~~l~~~~---~~~~l~~~~~a~~~~~~~~~~g-kvvi~~~~~ 356 (361)
++++.|++.. ..+ .++++++++++|++++.. +.|+++++++||+.+.+++..| |+|+++++.
T Consensus 289 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~ 363 (371)
T 3gqv_A 289 GSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGP 363 (371)
T ss_dssp CBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCc
Confidence 9999887543 222 245788999999998764 5699999999999999999887 778887765
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-50 Score=373.85 Aligned_cols=309 Identities=16% Similarity=0.210 Sum_probs=259.8
Q ss_pred ccccceecccCCC-CCccceeeeccCCC--CCeEEEEEeeeccccchhhhhhCCCCC-CCCC---------CcccccccE
Q 018094 10 PKNAFGWAARDTS-GVLSPFHFSRRATG--EKDVTFKVTHCGICHSDLHLIKNEWGN-AIYP---------IVPGHEIVG 76 (361)
Q Consensus 10 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~--~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p---------~~lG~e~~G 76 (361)
+|+++.+...+.| ..++++++|.|+|. ++||+|||.++|||++|++.+.|.++. ..+| .++|||++|
T Consensus 3 ~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~G 82 (364)
T 1gu7_A 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF 82 (364)
T ss_dssp EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred eEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeEE
Confidence 5777766543332 23888899998877 999999999999999999999986653 2456 899999999
Q ss_pred EEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCC--
Q 018094 77 VVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE-- 154 (361)
Q Consensus 77 ~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~-- 154 (361)
+|+++|+++++|++||||++.+ ...|+|+||+.+|++.++++|+
T Consensus 83 ~V~~vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~ 128 (364)
T 1gu7_A 83 EVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNPA 128 (364)
T ss_dssp EEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCHH
T ss_pred EEEEeCCCCCcCCCCCEEEecC----------------------------------CCCCcchheEecCHHHeEEcCCcc
Confidence 9999999999999999997532 2469999999999999999999
Q ss_pred ---------CCCcccccccchhhhhhhHHHHhhCCCCCC-CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh---H
Q 018094 155 ---------GTPLDATAPLLCAGITVYSPLRFYGLDKPG-MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK---K 220 (361)
Q Consensus 155 ---------~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g-~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~---~ 220 (361)
++++++||++++++.|||+++.+.+++++| ++|||+|+ |++|++++|+||.+|++|++++++.++ +
T Consensus 129 ~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~ 208 (364)
T 1gu7_A 129 QSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEV 208 (364)
T ss_dssp HHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHH
T ss_pred ccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHH
Confidence 899999999999999999999988789999 99999998 999999999999999999999876654 2
Q ss_pred HHHHHHcCCcEEecCCC---H---HHHHHhc----CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChH
Q 018094 221 SEAIERLGADSFLVSRD---Q---DEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAF 289 (361)
Q Consensus 221 ~~~~~~~g~~~v~~~~~---~---~~~~~~~----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 289 (361)
.+.++++|+++++++.+ . +.+.+++ .++|+|||++|+.. ...++++++++|+++.+|...+ ...++..
T Consensus 209 ~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 287 (364)
T 1gu7_A 209 VASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPTS 287 (364)
T ss_dssp HHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECHH
T ss_pred HHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccCCEEEEecCCCCCCcccCHH
Confidence 34558999999998753 2 2455554 37999999999887 5588999999999999997653 4567777
Q ss_pred HHhhCCcEEEecccCC---------HHHHHHHHHHHHcCCCceee-EEEecc---cHHHHHHHHHcCCCcEEEEEEe
Q 018094 290 SLLMGRKIVGGSMIGG---------MKETQEMIDFAAKHNIRADI-EVIPAD---YVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 290 ~~~~~~~~i~g~~~~~---------~~~~~~~~~~l~~~~l~~~~-~~~~l~---~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
.++.+++++.|++..+ .++++++++++++|++++.. .+++++ ++++||+.+.+++..||+|+++
T Consensus 288 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 288 LYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 364 (364)
T ss_dssp HHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred HHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence 7888999999986543 35689999999999999865 677664 9999999999988889999975
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-49 Score=363.16 Aligned_cols=308 Identities=21% Similarity=0.262 Sum_probs=261.7
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+|+++.+...+.++.+++.++|.|+|+++||+|||.+++||++|++...|.++...+|.++|||++|+|+++|+++++|+
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (327)
T 1qor_A 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIK 80 (327)
T ss_dssp -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 36777776655566788899999999999999999999999999999998776556899999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||.. + + ...|+|+||+.+|++.++++|+++++++||++++++.
T Consensus 81 ~GdrV~~-~--------------------------------g-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ 126 (327)
T 1qor_A 81 AGDRVVY-A--------------------------------Q-SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGL 126 (327)
T ss_dssp TTCEEEE-S--------------------------------C-CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCEEEE-C--------------------------------C-CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHH
Confidence 9999942 1 0 1359999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAM 245 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~ 245 (361)
|||+++....++++|++|||+|+ |++|++++|+++..|++|+++++++++... ++++|++.++++.+++ .+.+.+
T Consensus 127 ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~ 205 (327)
T 1qor_A 127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS-ALKAGAWQVINYREEDLVERLKEIT 205 (327)
T ss_dssp HHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHHHTCSEEEETTTSCHHHHHHHHT
T ss_pred HHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHcCCCEEEECCCccHHHHHHHHh
Confidence 99999987788999999999996 999999999999999999999998776644 4779999888876644 333444
Q ss_pred C--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhC-CcEEEeccc----CC----HHHHHHHH
Q 018094 246 G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMG-RKIVGGSMI----GG----MKETQEMI 313 (361)
Q Consensus 246 ~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~g~~~----~~----~~~~~~~~ 313 (361)
+ ++|++||++| ...++.++++++++|+++.+|...+. ..++...++.+ ++++.+... .+ .+.+++++
T Consensus 206 ~~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
T 1qor_A 206 GGKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELF 284 (327)
T ss_dssp TTCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHH
T ss_pred CCCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHH
Confidence 3 7999999999 45599999999999999999976543 45676777778 888876432 22 34578999
Q ss_pred HHHHcCCCceee---EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 314 DFAAKHNIRADI---EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 314 ~~l~~~~l~~~~---~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+++++|++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus 285 ~l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 285 SLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp HHHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred HHHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 999999998765 5999999999999999988889999874
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-48 Score=364.91 Aligned_cols=314 Identities=21% Similarity=0.248 Sum_probs=256.8
Q ss_pred CcccccccceecccCCCCCccc-eeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCC---------------CCCCCC
Q 018094 6 EQEHPKNAFGWAARDTSGVLSP-FHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWG---------------NAIYPI 68 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~-~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~ 68 (361)
.++++|+++.+...+.+..+++ +++|.|.+ +++||+|||.++|||++|++.+.|..+ ...+|.
T Consensus 17 ~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~ 96 (375)
T 2vn8_A 17 NLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL 96 (375)
T ss_dssp -CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred ccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence 4566788887766655667888 89999985 999999999999999999999887531 123789
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc
Q 018094 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148 (361)
Q Consensus 69 ~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 148 (361)
++|||++|+|+++|+++++|++||||++.+. ....|+|+||+.+|++.
T Consensus 97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~--------------------------------~~~~G~~aey~~v~~~~ 144 (375)
T 2vn8_A 97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVP--------------------------------PWKQGTLSEFVVVSGNE 144 (375)
T ss_dssp CCCCEEEEEEEEECTTCCSCCTTCEEEEECC--------------------------------TTSCCSSBSEEEEEGGG
T ss_pred ccceeeeEEEEEeCCCCCCCCCCCEEEEecC--------------------------------CCCCccceeEEEEcHHH
Confidence 9999999999999999999999999986331 12469999999999999
Q ss_pred eEECCCCCCcccccccchhhhhhhHHHHhhCC----CCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 018094 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL----DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 223 (361)
Q Consensus 149 v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~----~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~ 223 (361)
++++|+++++++||++++++.|||+++...++ +++|++|||+|+ |++|++++|+|+..|++|++++ ++++ .++
T Consensus 145 ~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~-~~~ 222 (375)
T 2vn8_A 145 VSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDA-SEL 222 (375)
T ss_dssp EEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-HHH
T ss_pred eeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHH-HHH
Confidence 99999999999999999999999999987777 899999999995 9999999999999999999888 4555 456
Q ss_pred HHHcCCcEEecCCCHHHHHHhc--CCccEEEEcCCCc-ccHHHHHHhhccCCEEEEecCCCCC-c-c--cCh------HH
Q 018094 224 IERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVGAPEKP-L-E--LPA------FS 290 (361)
Q Consensus 224 ~~~~g~~~v~~~~~~~~~~~~~--~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~-~-~--~~~------~~ 290 (361)
++++|++.++++.+.+...++. .++|++||++|+. .++..++++++++|+++.+|..... . . ++. ..
T Consensus 223 ~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~ 302 (375)
T 2vn8_A 223 VRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVT 302 (375)
T ss_dssp HHHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehh
Confidence 6899999999987655444443 4899999999997 4457888999999999999865321 1 0 110 01
Q ss_pred Hhh-------CCcEEEeccc-CCHHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 291 LLM-------GRKIVGGSMI-GGMKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 291 ~~~-------~~~~i~g~~~-~~~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++. ++..+.+... ...+.++++++++++|++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus 303 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 374 (375)
T 2vn8_A 303 VGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374 (375)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred hccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence 112 4555554432 3456789999999999999877 8999999999999999988889999986
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-48 Score=362.14 Aligned_cols=308 Identities=17% Similarity=0.264 Sum_probs=257.8
Q ss_pred cccccccceecccCCC--CCccc-eeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeC
Q 018094 7 QEHPKNAFGWAARDTS--GVLSP-FHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVG 82 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~--~~l~~-~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG 82 (361)
++.+|+++.+...+.+ +.+++ +++|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|
T Consensus 20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG 99 (362)
T 2c0c_A 20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALG 99 (362)
T ss_dssp HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEEC
T ss_pred chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEEC
Confidence 4556777777554332 35788 899999999999999999999999999999987643 4678999999999999999
Q ss_pred CCCC-CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccc
Q 018094 83 SKVS-KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDAT 161 (361)
Q Consensus 83 ~~~~-~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~a 161 (361)
++++ +|++||||++ ...|+|+||+.+|++.++++|+.. .++
T Consensus 100 ~~V~~~~~vGdrV~~------------------------------------~~~G~~aey~~v~~~~~~~~P~~~--~~a 141 (362)
T 2c0c_A 100 LSASARYTVGQAVAY------------------------------------MAPGSFAEYTVVPASIATPVPSVK--PEY 141 (362)
T ss_dssp TTGGGTCCTTCEEEE------------------------------------ECSCCSBSEEEEEGGGCEECSSSC--HHH
T ss_pred CCccCCCCCCCEEEE------------------------------------ccCCcceeEEEEcHHHeEECCCCc--hHh
Confidence 9999 9999999974 236999999999999999999963 567
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH-
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD- 239 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~- 239 (361)
+++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|++|++++++++++ +.++++|++.++++.+.+
T Consensus 142 aal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~~~Ga~~~~~~~~~~~ 220 (362)
T 2c0c_A 142 LTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS-AFLKSLGCDRPINYKTEPV 220 (362)
T ss_dssp HTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEETTTSCH
T ss_pred hcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHcCCcEEEecCChhH
Confidence 7888999999999988888999999999995 9999999999999999999999887765 445889999998876543
Q ss_pred --HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-----------ccChHHHhhCCcEEEecccCC
Q 018094 240 --EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-----------ELPAFSLLMGRKIVGGSMIGG 305 (361)
Q Consensus 240 --~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~i~g~~~~~ 305 (361)
.+.+.++ ++|++||++|+. .+..++++++++|+++.+|...... .+ ...++.+++++.|++...
T Consensus 221 ~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~ 298 (362)
T 2c0c_A 221 GTVLKQEYPEGVDVVYESVGGA-MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNH 298 (362)
T ss_dssp HHHHHHHCTTCEEEEEECSCTH-HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGG
T ss_pred HHHHHHhcCCCCCEEEECCCHH-HHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhh
Confidence 3334443 799999999985 4899999999999999998754211 11 245678999999987532
Q ss_pred -----HHHHHHHHHHHHcCCCceee---------EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 306 -----MKETQEMIDFAAKHNIRADI---------EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 306 -----~~~~~~~~~~l~~~~l~~~~---------~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
.++++++++++++|++++.+ +.++++++++||+.+++++..||+|+++++
T Consensus 299 ~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 362 (362)
T 2c0c_A 299 YLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH 362 (362)
T ss_dssp CGGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred hhhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence 45789999999999998753 357999999999999998888999998753
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-48 Score=355.38 Aligned_cols=303 Identities=21% Similarity=0.228 Sum_probs=259.4
Q ss_pred cccccceeccc--C--CCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCccccc----ccEEEEE
Q 018094 9 HPKNAFGWAAR--D--TSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHE----IVGVVTE 80 (361)
Q Consensus 9 ~~~~~~~~~~~--~--~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e----~~G~V~~ 80 (361)
.+|+++.+..+ + +++.+++.++|.|+|+++||||||++++||++|++.+.+... ..+|.++||| ++|+|++
T Consensus 6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~ 84 (336)
T 4b7c_A 6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV 84 (336)
T ss_dssp CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence 45777777642 2 467899999999999999999999999999999988876432 2457777887 7999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccc
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDA 160 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~ 160 (361)
. ++++|++||||++ .|+|+||+.+|++.++++|+++++.+
T Consensus 85 ~--~v~~~~vGdrV~~--------------------------------------~G~~aey~~v~~~~~~~~P~~~~~~~ 124 (336)
T 4b7c_A 85 S--KHPGFQAGDYVNG--------------------------------------ALGVQDYFIGEPKGFYKVDPSRAPLP 124 (336)
T ss_dssp E--CSTTCCTTCEEEE--------------------------------------ECCSBSEEEECCTTCEEECTTTSCGG
T ss_pred c--CCCCCCCCCEEec--------------------------------------cCCceEEEEechHHeEEcCCCCCchH
Confidence 4 5889999999963 48999999999999999999998887
Q ss_pred c--cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 161 T--APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 161 a--a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
+ +++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++.+.+.+++|++.++++.+
T Consensus 125 ~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~ 204 (336)
T 4b7c_A 125 RYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKN 204 (336)
T ss_dssp GGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTT
T ss_pred HHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCC
Confidence 6 7899999999999988888999999999998 999999999999999999999998887766558999999998876
Q ss_pred HH---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC----C---cccChHHHhhCCcEEEecccCCH
Q 018094 238 QD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK----P---LELPAFSLLMGRKIVGGSMIGGM 306 (361)
Q Consensus 238 ~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~---~~~~~~~~~~~~~~i~g~~~~~~ 306 (361)
.+ .+.+.++ ++|++||++|+. .+..++++++++|+++.+|.... . ..++...++.|++++.|+...+.
T Consensus 205 ~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 283 (336)
T 4b7c_A 205 EDLAAGLKRECPKGIDVFFDNVGGE-ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDY 283 (336)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGG
T ss_pred HHHHHHHHHhcCCCceEEEECCCcc-hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhh
Confidence 54 3444444 799999999985 48999999999999999997541 1 34566678889999999887653
Q ss_pred -----HHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 307 -----KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 307 -----~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
+.++++++++++|++++.+ .+++++++++||+.+.+++..||+|+++
T Consensus 284 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 284 AQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp GGGHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred hhhhHHHHHHHHHHHHCCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 6789999999999999887 6799999999999999999999999975
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-48 Score=356.54 Aligned_cols=311 Identities=21% Similarity=0.261 Sum_probs=252.2
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
+|+++.+...+++..++++++|.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++ ++++|
T Consensus 3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~ 80 (328)
T 1xa0_A 3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF 80 (328)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence 688887766554457888999999999999999999999999999998886542 357899999999999995 56889
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhh
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
++||||++.... .|....|+|+||+.+|++.++++|+++++++|+++++++
T Consensus 81 ~vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~ 131 (328)
T 1xa0_A 81 REGDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAG 131 (328)
T ss_dssp CTTCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHH
T ss_pred CCCCEEEEcccc-----------------------------CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhH
Confidence 999999763210 122457999999999999999999999999999999999
Q ss_pred hhhhHHHHh--hCCCCCCC-EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCH--HHHH
Q 018094 169 ITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQ--DEMQ 242 (361)
Q Consensus 169 ~~a~~~l~~--~~~~~~g~-~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~ 242 (361)
.|||.+++. ...+++|+ +|||+|+ |++|++++|+|+.+|++|+++++++++++ .++++|+++++++.+. +.+.
T Consensus 132 ~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~~lGa~~~i~~~~~~~~~~~ 210 (328)
T 1xa0_A 132 FTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLRVLGAKEVLAREDVMAERIR 210 (328)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHHHTTCSEEEECC--------
T ss_pred HHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcCCcEEEecCCcHHHHHH
Confidence 999988753 35678886 9999998 99999999999999999999999877764 4588999999987654 2233
Q ss_pred HhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEeccc--CCH----HHHHHHHH
Q 018094 243 AAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGM----KETQEMID 314 (361)
Q Consensus 243 ~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~----~~~~~~~~ 314 (361)
++++ ++|++||++|+. .+..++++++++|+++.+|...+ ...++...++.|++++.|+.. ... +.++.+++
T Consensus 211 ~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 289 (328)
T 1xa0_A 211 PLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAG 289 (328)
T ss_dssp -CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHT
T ss_pred HhcCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHH
Confidence 4443 799999999986 59999999999999999998654 345666677889999999742 232 23455566
Q ss_pred HHHcCCCceeeEEEecccHHHHHHHHHcCCCcEEEEEEeC
Q 018094 315 FAAKHNIRADIEVIPADYVNTALERLAKADVRYRFVIDVA 354 (361)
Q Consensus 315 ~l~~~~l~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~~ 354 (361)
++.++ +++..++|+++++++||+.+++++..||+|++++
T Consensus 290 ~~~~g-l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 328 (328)
T 1xa0_A 290 DLKPD-LERIAQEISLAELPQALKRILRGELRGRTVVRLA 328 (328)
T ss_dssp TTCCC-HHHHEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred HHHcC-CceeeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 66666 6665599999999999999999888899999873
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-49 Score=362.25 Aligned_cols=313 Identities=18% Similarity=0.216 Sum_probs=256.8
Q ss_pred ccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCC
Q 018094 8 EHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
+.+|+++.+...+.+..++++++|.|+|+++||+|||.++|||++|++...|.++. ..+|.++|||++|+|+++ +++
T Consensus 2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~ 79 (330)
T 1tt7_A 2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDP 79 (330)
T ss_dssp CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SST
T ss_pred CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCC
Confidence 44688888766555567889999999999999999999999999999999886543 357899999999999996 467
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccch
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~ 166 (361)
+|++||||++.... .|....|+|+||+.+|++.++++|+++++++||++++
T Consensus 80 ~~~vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~ 130 (330)
T 1tt7_A 80 RFAEGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGT 130 (330)
T ss_dssp TCCTTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHH
T ss_pred CCCCCCEEEEcccc-----------------------------cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccc
Confidence 89999999863210 1224579999999999999999999999999999999
Q ss_pred hhhhhhHHHHh--hCCCCCCC-EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH--H
Q 018094 167 AGITVYSPLRF--YGLDKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD--E 240 (361)
Q Consensus 167 ~~~~a~~~l~~--~~~~~~g~-~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~--~ 240 (361)
.+.|||.+++. ...+++|+ +|||+|+ |++|++++|+|+.+|++|++++++++++ ++++++|+++++++.+.+ .
T Consensus 131 ~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~-~~~~~lGa~~v~~~~~~~~~~ 209 (330)
T 1tt7_A 131 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA-DYLKQLGASEVISREDVYDGT 209 (330)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH-HHHHHHTCSEEEEHHHHCSSC
T ss_pred hHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcCCcEEEECCCchHHH
Confidence 99999988753 35678886 9999998 9999999999999999999999987776 455889999988764321 1
Q ss_pred HHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEeccc--CCH----HHHHHH
Q 018094 241 MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGM----KETQEM 312 (361)
Q Consensus 241 ~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~----~~~~~~ 312 (361)
+.+++ +++|++||++|+. .+..++++++++|+++.+|...+ ...++...++.|++++.|+.. ... +.++.+
T Consensus 210 ~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 288 (330)
T 1tt7_A 210 LKALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERM 288 (330)
T ss_dssp CCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHT
T ss_pred HHHhhcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHH
Confidence 22223 3799999999995 59999999999999999998654 356666677889999999842 222 235566
Q ss_pred HHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 313 IDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 313 ~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++++.++++++.+ ++|+++++++||+.+++++..||+|+++
T Consensus 289 ~~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 289 SSDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp TTTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred HHHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 6677778888877 9999999999999999888889999864
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=352.00 Aligned_cols=310 Identities=12% Similarity=0.106 Sum_probs=258.3
Q ss_pred Cccccccccee-ccc---CCC--CCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhC----CCC-CCCCCCccccc
Q 018094 6 EQEHPKNAFGW-AAR---DTS--GVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKN----EWG-NAIYPIVPGHE 73 (361)
Q Consensus 6 ~~~~~~~~~~~-~~~---~~~--~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g----~~~-~~~~p~~lG~e 73 (361)
.++.+|+++++ ... +.| +.+++.++|.|+| +++||+|||.++|||++|++.+.+ .+. ...+|.++|||
T Consensus 4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E 83 (357)
T 2zb4_A 4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG 83 (357)
T ss_dssp --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence 45667888877 333 334 6799999999999 999999999999999999987765 232 23678899999
Q ss_pred ccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECC
Q 018094 74 IVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIP 153 (361)
Q Consensus 74 ~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP 153 (361)
++|+|++ +++++|++||||++ ..|+|+||+++|++.++++|
T Consensus 84 ~~G~V~~--~~v~~~~vGdrV~~-------------------------------------~~G~~aey~~v~~~~~~~iP 124 (357)
T 2zb4_A 84 GIGIIEE--SKHTNLTKGDFVTS-------------------------------------FYWPWQTKVILDGNSLEKVD 124 (357)
T ss_dssp EEEEEEE--ECSTTCCTTCEEEE-------------------------------------EEEESBSEEEEEGGGCEECC
T ss_pred EEEEEEe--cCCCCCCCCCEEEe-------------------------------------cCCCcEEEEEEchHHceecC
Confidence 9999999 88999999999974 24789999999999999999
Q ss_pred CCC-----CcccccccchhhhhhhHHHHhhCCCCCC--CEEEEEcc-chHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 018094 154 EGT-----PLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI 224 (361)
Q Consensus 154 ~~~-----~~~~aa~l~~~~~~a~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~ 224 (361)
+++ +++ ++++++++.|||+++.+..++++| ++|||+|+ |++|++++|+++..|+ +|++++++++++..+.
T Consensus 125 ~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~ 203 (357)
T 2zb4_A 125 PQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLT 203 (357)
T ss_dssp GGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred cccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH
Confidence 999 554 778999999999999877889999 99999998 9999999999999999 9999999887776664
Q ss_pred HHcCCcEEecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccC---------hHH
Q 018094 225 ERLGADSFLVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELP---------AFS 290 (361)
Q Consensus 225 ~~~g~~~v~~~~~~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~---------~~~ 290 (361)
+++|++.++++.+.+ .+.+.++ ++|++||++|+. .+..++++++++|+++.+|..... ..++ ...
T Consensus 204 ~~~g~~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~ 282 (357)
T 2zb4_A 204 SELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGN-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAI 282 (357)
T ss_dssp HTSCCSEEEETTTSCHHHHHHHHCTTCEEEEEESCCHH-HHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHH
T ss_pred HHcCCceEEecCchHHHHHHHHhcCCCCCEEEECCCHH-HHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhh
Confidence 449999888876543 3444444 799999999974 489999999999999999875431 1222 145
Q ss_pred HhhCCcEEEecccCC-----HHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 291 LLMGRKIVGGSMIGG-----MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 291 ~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
++.+++++.|+.... .++++++++++++|++++.. .+|+|+++++||+.+.+++..||+|++++++
T Consensus 283 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~ 354 (357)
T 2zb4_A 283 QKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354 (357)
T ss_dssp HHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred hhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence 678999999986543 56789999999999999876 7899999999999999988889999999764
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-47 Score=343.97 Aligned_cols=290 Identities=23% Similarity=0.338 Sum_probs=245.0
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...+.+.. +.++|.|+|+++||+|||+++|||++|++...|.++. ..+|.++|||++|+|+
T Consensus 1 Mka~~~~~~g~~~~--l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~---------- 68 (302)
T 1iz0_A 1 MKAWVLKRLGGPLE--LVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE---------- 68 (302)
T ss_dssp CEEEEECSTTSCEE--EEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred CeEEEEcCCCCchh--eEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE----------
Confidence 45555544333323 4488999999999999999999999999999986653 3678999999999997
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
||||++. ...|+|+||+.+|++.++++|+++++++||++++++.
T Consensus 69 -GdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 112 (302)
T 1iz0_A 69 -GRRYAAL-----------------------------------VPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFL 112 (302)
T ss_dssp -TEEEEEE-----------------------------------CSSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHH
T ss_pred -CcEEEEe-----------------------------------cCCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHH
Confidence 9999752 2469999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC-HHHHHHhcCC
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD-QDEMQAAMGT 247 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~~~g 247 (361)
|||+++.... +++|++|||+|+ |++|++++|+|+.+|++|++++++++++.. ++++|+++++++.+ .+...++ ++
T Consensus 113 ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~~~~~~~~~~~~~~~~-~~ 189 (302)
T 1iz0_A 113 TAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLALGAEEAATYAEVPERAKAW-GG 189 (302)
T ss_dssp HHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHHTTCSEEEEGGGHHHHHHHT-TS
T ss_pred HHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhcCCCEEEECCcchhHHHHh-cC
Confidence 9999998777 899999999998 999999999999999999999998877654 48899999998876 5555555 78
Q ss_pred ccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccC----CHHHHHHHHH---HHHcC
Q 018094 248 MDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIG----GMKETQEMID---FAAKH 319 (361)
Q Consensus 248 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~----~~~~~~~~~~---~l~~~ 319 (361)
+|++|| +|+. .+..++++++++|+++.+|..... ..++...++.+++++.|+... ..++++++++ ++++|
T Consensus 190 ~d~vid-~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g 267 (302)
T 1iz0_A 190 LDLVLE-VRGK-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGR 267 (302)
T ss_dssp EEEEEE-CSCT-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTT
T ss_pred ceEEEE-CCHH-HHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcC
Confidence 999999 9984 599999999999999999976543 356666678899999998753 5677899999 99999
Q ss_pred CCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 320 NIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 320 ~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
++++.+ ++|+++++++||+.+.+++..||+|+++
T Consensus 268 ~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 268 ELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp TBCCCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred CcccccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 999877 8999999999999999888889999864
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=359.09 Aligned_cols=305 Identities=15% Similarity=0.117 Sum_probs=246.2
Q ss_pred cccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC--------------------------
Q 018094 9 HPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG-------------------------- 62 (361)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~-------------------------- 62 (361)
..|+++... ..+..+++.++|.|+|+++||||||++++||++|++.+.|.++
T Consensus 6 ~~mka~v~~--~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~ 83 (379)
T 3iup_A 6 LQLRSRIKS--SGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRS 83 (379)
T ss_dssp EEEEEEECT--TSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHH
T ss_pred hhHHHHHhc--CCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccccc
Confidence 345555442 3455789999999999999999999999999999999988531
Q ss_pred ---CCCCCCcccccccEEEEEeCCCC-CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCcc
Q 018094 63 ---NAIYPIVPGHEIVGVVTEVGSKV-SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGY 138 (361)
Q Consensus 63 ---~~~~p~~lG~e~~G~V~~vG~~~-~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 138 (361)
...+|.++|||++|+|+++|++| ++|++||||++ ...|+|
T Consensus 84 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~------------------------------------~~~G~~ 127 (379)
T 3iup_A 84 MAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA------------------------------------IGGAMY 127 (379)
T ss_dssp HGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEE------------------------------------CCSCCS
T ss_pred cccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEe------------------------------------cCCCcc
Confidence 23568899999999999999999 88999999975 246999
Q ss_pred ceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEE--ccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 139 SDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 139 ~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~--Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
+||+.+|+++++++|+++++++||++++..+|||++++... ++|++|||+ |+|++|++++|+||.+|++|++++++
T Consensus 128 aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~ 205 (379)
T 3iup_A 128 SQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRK 205 (379)
T ss_dssp BSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 99999999999999999999999999999999998887654 899999999 45999999999999999999999988
Q ss_pred chhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHHhhc-----cC-----------CEEE
Q 018094 217 PSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLK-----SQ-----------GKLV 275 (361)
Q Consensus 217 ~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~-----~~-----------G~~v 275 (361)
++++ ++++++|+++++++++++ .+.++++ ++|++|||+|+......++++++ ++ |+++
T Consensus 206 ~~~~-~~~~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv 284 (379)
T 3iup_A 206 QEQA-DLLKAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVY 284 (379)
T ss_dssp HHHH-HHHHHTTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEE
T ss_pred HHHH-HHHHhCCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEE
Confidence 7775 555899999999987754 3444443 79999999999876788888885 45 4555
Q ss_pred EecCCCCCcccChHHHhhCCcEEEecccCC------HHHH----HHHHHHHHcCCCceee-EEEecccH--HHHHHHHHc
Q 018094 276 LVGAPEKPLELPAFSLLMGRKIVGGSMIGG------MKET----QEMIDFAAKHNIRADI-EVIPADYV--NTALERLAK 342 (361)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~----~~~~~~l~~~~l~~~~-~~~~l~~~--~~a~~~~~~ 342 (361)
.+|.... ..++...++.+++++.|+...+ .+.+ +.+++++.+ .+++.+ ++|+++++ ++||+.+.+
T Consensus 285 ~~G~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~ 362 (379)
T 3iup_A 285 LYGGLDT-SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNK 362 (379)
T ss_dssp ECCCSEE-EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTT
T ss_pred EecCCCC-CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhc
Confidence 5544321 1222234566889999976532 2333 555566666 577777 99999999 999999999
Q ss_pred CCCcEEEEEEeCCc
Q 018094 343 ADVRYRFVIDVANT 356 (361)
Q Consensus 343 ~~~~gkvvi~~~~~ 356 (361)
++..||+|++++..
T Consensus 363 ~~~~gKvVv~~~~g 376 (379)
T 3iup_A 363 RATGEKYLINPNKG 376 (379)
T ss_dssp CCTTCCEEEETTTT
T ss_pred CCCCceEEEeCCCC
Confidence 99999999999764
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=333.61 Aligned_cols=308 Identities=16% Similarity=0.108 Sum_probs=251.6
Q ss_pred cccccccceeccc--CCCC--Cccce--eeeccC-CCCCeEEEEEeeeccccchhhhhhCCCCC----CCCCCccccccc
Q 018094 7 QEHPKNAFGWAAR--DTSG--VLSPF--HFSRRA-TGEKDVTFKVTHCGICHSDLHLIKNEWGN----AIYPIVPGHEIV 75 (361)
Q Consensus 7 ~~~~~~~~~~~~~--~~~~--~l~~~--~~~~p~-~~~~~vlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~lG~e~~ 75 (361)
||.+|+++.+... +.|+ .++++ ++|.|. |+++||||||.++++|+.|. ...|.+.. ..+|.++|||++
T Consensus 1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~ 79 (345)
T 2j3h_A 1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ 79 (345)
T ss_dssp CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence 3456777766654 5666 68887 888887 89999999999999988875 44454322 146889999999
Q ss_pred EEEEE--eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc--eEE
Q 018094 76 GVVTE--VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF--VVR 151 (361)
Q Consensus 76 G~V~~--vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--v~~ 151 (361)
|++++ ||+++++|++||||++ .|+|+||+.+++.. +++
T Consensus 80 G~~~~GvV~~~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~~~ 121 (345)
T 2j3h_A 80 GYGVSRIIESGHPDYKKGDLLWG--------------------------------------IVAWEEYSVITPMTHAHFK 121 (345)
T ss_dssp EEEEEEEEEECSTTCCTTCEEEE--------------------------------------EEESBSEEEECCCTTTCEE
T ss_pred cceEEEEEecCCCCCCCCCEEEe--------------------------------------ecCceeEEEecccccceee
Confidence 99999 9999999999999963 37899999998876 999
Q ss_pred CCC---CCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc
Q 018094 152 IPE---GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL 227 (361)
Q Consensus 152 iP~---~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~ 227 (361)
+|+ +++++ +|++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++...+.+++
T Consensus 122 ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~ 200 (345)
T 2j3h_A 122 IQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF 200 (345)
T ss_dssp ECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS
T ss_pred cCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence 996 35555 67899999999999988788999999999997 99999999999999999999999887765553379
Q ss_pred CCcEEecCCCH----HHHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC------CcccChHHHhhCCc
Q 018094 228 GADSFLVSRDQ----DEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PLELPAFSLLMGRK 296 (361)
Q Consensus 228 g~~~v~~~~~~----~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~ 296 (361)
|++.++++.+. +.+.+.++ ++|++||++|+. .+..++++++++|+++.+|.... ...++...++.+++
T Consensus 201 g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~ 279 (345)
T 2j3h_A 201 GFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRN 279 (345)
T ss_dssp CCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTC
T ss_pred CCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhce
Confidence 99988887542 34444443 799999999985 58999999999999999987542 23455667788999
Q ss_pred EEEecccCCH-----HHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEeCC
Q 018094 297 IVGGSMIGGM-----KETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDVAN 355 (361)
Q Consensus 297 ~i~g~~~~~~-----~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~ 355 (361)
++.|+...+. +.++++++++++|++++.+ ++|+|+++++||+.+++++..||+|+++++
T Consensus 280 ~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 344 (345)
T 2j3h_A 280 RIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVAR 344 (345)
T ss_dssp EEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSC
T ss_pred eeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 9999765432 3488999999999999877 589999999999999999989999999864
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=326.65 Aligned_cols=303 Identities=17% Similarity=0.148 Sum_probs=249.3
Q ss_pred CCcccccccceeccc--CC--CCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEE
Q 018094 5 PEQEHPKNAFGWAAR--DT--SGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTE 80 (361)
Q Consensus 5 ~~~~~~~~~~~~~~~--~~--~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~ 80 (361)
|+.+.+|+++.+..+ +. ++.+++.++|.|+|+++||+|||.++|||+.|... .. ...+|.++|||++|+|++
T Consensus 2 ~~~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~~---~~~~p~~~g~e~~G~Vv~ 77 (333)
T 1v3u_A 2 PEFMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-SK---RLKEGAVMMGQQVARVVE 77 (333)
T ss_dssp --CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-TT---TCCTTSBCCCCEEEEEEE
T ss_pred CcccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-cC---cCCCCcccccceEEEEEe
Confidence 555667888887664 33 36788899999999999999999999999998732 11 235678999999999999
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCC----C
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG----T 156 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~----~ 156 (361)
. ++++|++||||++ .|+|+||+.+|++.++++|++ +
T Consensus 78 ~--~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~ 117 (333)
T 1v3u_A 78 S--KNSAFPAGSIVLA--------------------------------------QSGWTTHFISDGKGLEKLLTEWPDKL 117 (333)
T ss_dssp E--SCTTSCTTCEEEE--------------------------------------CCCSBSEEEESSTTEEECC--CCTTS
T ss_pred c--CCCCCCCCCEEEe--------------------------------------cCceEEEEEechHHeEEcCcccccCC
Confidence 5 5788999999963 378999999999999999997 8
Q ss_pred Cccc-ccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec
Q 018094 157 PLDA-TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 157 ~~~~-aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
++++ ++++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++...+ +++|++.++|
T Consensus 118 ~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d 196 (333)
T 1v3u_A 118 PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFN 196 (333)
T ss_dssp CGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEE
T ss_pred CHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCcEEEe
Confidence 8888 48999999999999988888999999999998 9999999999999999999999888776555 8899988888
Q ss_pred CCC-HH---HHHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC------Cc-ccChHHHhhCCcEEEecc
Q 018094 235 SRD-QD---EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK------PL-ELPAFSLLMGRKIVGGSM 302 (361)
Q Consensus 235 ~~~-~~---~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~-~~~~~~~~~~~~~i~g~~ 302 (361)
..+ ++ .+.+.+ +++|++||++|+.. +..++++++++|+++.+|.... .. ..+...++.+++++.|+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 275 (333)
T 1v3u_A 197 YKTVNSLEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFI 275 (333)
T ss_dssp TTSCSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHHHHhCCCCeEEEECCChHH-HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEe
Confidence 765 33 344444 37999999999865 8899999999999999997643 11 235666888999999986
Q ss_pred cCC------HHHHHHHHHHHHcCCCceee-EEEecccHHHHHHHHHcCCCcEEEEEEe
Q 018094 303 IGG------MKETQEMIDFAAKHNIRADI-EVIPADYVNTALERLAKADVRYRFVIDV 353 (361)
Q Consensus 303 ~~~------~~~~~~~~~~l~~~~l~~~~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 353 (361)
... .+.++++++++++|++++.. .+++++++++||+.+++++..||+|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 276 VYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp GGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred hhhcchHHHHHHHHHHHHHHHCCCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence 543 35678899999999999876 6789999999999999988889999974
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-44 Score=363.38 Aligned_cols=294 Identities=19% Similarity=0.229 Sum_probs=249.1
Q ss_pred cCCCCCccceeeec--cCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018094 19 RDTSGVLSPFHFSR--RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 19 ~~~~~~l~~~~~~~--p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
++.++.|++.+.|. |+|+++||+|||+++|||++|+++..|.++ .|.++|||++|+|+++|++|++|++||||+.
T Consensus 218 ~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~ 294 (795)
T 3slk_A 218 PGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAPGDRVMG 294 (795)
T ss_dssp TTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCTTCEEEE
T ss_pred CCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCCCCEEEE
Confidence 34556777777664 578999999999999999999999988664 3567999999999999999999999999974
Q ss_pred ccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHH
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 176 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~ 176 (361)
...|+|++|+.+++..++++|+++++++||++++.+.|||+++.
T Consensus 295 ------------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~ 338 (795)
T 3slk_A 295 ------------------------------------MIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALV 338 (795)
T ss_dssp ------------------------------------CCSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred ------------------------------------EecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHH
Confidence 24689999999999999999999999999999999999999998
Q ss_pred hhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH---HHHHhcC--CccE
Q 018094 177 FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD---EMQAAMG--TMDG 250 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~~~~--g~d~ 250 (361)
+.+++++|++|||+|+ |++|++++|+||.+|++|+++++++ ++..+ + +|+++++++++.+ .+.+.++ |+|+
T Consensus 339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l-~-lga~~v~~~~~~~~~~~i~~~t~g~GvDv 415 (795)
T 3slk_A 339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV-E-LSREHLASSRTCDFEQQFLGATGGRGVDV 415 (795)
T ss_dssp CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS-C-SCGGGEECSSSSTHHHHHHHHSCSSCCSE
T ss_pred HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh-h-cChhheeecCChhHHHHHHHHcCCCCeEE
Confidence 8899999999999997 9999999999999999999998765 44333 3 8999999987654 4555554 7999
Q ss_pred EEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCC------HHHHHHHHHHHHcCCCcee
Q 018094 251 IIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG------MKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~------~~~~~~~~~~l~~~~l~~~ 324 (361)
|||++|++. +..++++++++|+++.+|........... ...+++++.++.... .+.++++++++++|++++.
T Consensus 416 Vld~~gg~~-~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~ 493 (795)
T 3slk_A 416 VLNSLAGEF-ADASLRMLPRGGRFLELGKTDVRDPVEVA-DAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPL 493 (795)
T ss_dssp EEECCCTTT-THHHHTSCTTCEEEEECCSTTCCCHHHHH-HHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCC
T ss_pred EEECCCcHH-HHHHHHHhcCCCEEEEeccccccCccccc-ccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCC
Confidence 999999865 89999999999999999976543222221 234778887765421 2458889999999999987
Q ss_pred e-EEEecccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 325 I-EVIPADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 325 ~-~~~~l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
+ ++|+++++++||+.+++++..||+|+++...
T Consensus 494 ~~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~~ 526 (795)
T 3slk_A 494 PVTAWDVRQAPEALRHLSQARHVGKLVLTMPPV 526 (795)
T ss_dssp CEEEEEGGGHHHHHHHHHHTCCCBEEEEECCCC
T ss_pred cceeEcHHHHHHHHHHHhcCCccceEEEecCcc
Confidence 6 9999999999999999999999999998754
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=309.59 Aligned_cols=274 Identities=19% Similarity=0.240 Sum_probs=225.1
Q ss_pred CCeEEEEEeeeccccchhhhhhCCCCCC-------CCCCcccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCccc
Q 018094 37 EKDVTFKVTHCGICHSDLHLIKNEWGNA-------IYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSC 109 (361)
Q Consensus 37 ~~~vlV~v~~~~i~~~D~~~~~g~~~~~-------~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~ 109 (361)
++||+|||.++|+|+.|++...|.++.. ..|.++|+|++|+|. +||||+.
T Consensus 1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV~g------------- 1615 (2512)
T 2vz8_A 1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRVMG------------- 1615 (2512)
T ss_dssp HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCEEE-------------
T ss_pred CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEEEE-------------
Confidence 7999999999999999999998866432 245789999999873 6999973
Q ss_pred ccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEE
Q 018094 110 AIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 189 (361)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI 189 (361)
....|+|++|+.+|+..++++|+++++++||++++.+.|||+++...+++++|++|||
T Consensus 1616 ----------------------~~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI 1673 (2512)
T 2vz8_A 1616 ----------------------MVPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI 1673 (2512)
T ss_dssp ----------------------ECSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred ----------------------eecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 2346999999999999999999999999999999999999999988888999999999
Q ss_pred Ecc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEEecCCCHHH---HHHhcC--CccEEEEcCCCccc
Q 018094 190 VGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHP 260 (361)
Q Consensus 190 ~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~---~~~~~~--g~d~vid~~g~~~~ 260 (361)
+|+ |++|++++|+||.+|++|++++++++++..+.+. +|+++++++++.+. +.+.++ |+|+|||++++. .
T Consensus 1674 ~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~-~ 1752 (2512)
T 2vz8_A 1674 HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEE-K 1752 (2512)
T ss_dssp TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHH-H
T ss_pred EeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCch-H
Confidence 987 9999999999999999999999988887666442 67888998877543 444454 799999999865 4
Q ss_pred HHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccC-----CHHHHHHHHHHHH----cCCCceee-EEEe
Q 018094 261 LMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIG-----GMKETQEMIDFAA----KHNIRADI-EVIP 329 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~-----~~~~~~~~~~~l~----~~~l~~~~-~~~~ 329 (361)
+..++++++++|+++.+|..... .......++.+++++.++... ..+.++.+++++. ++++++.+ ++|+
T Consensus 1753 l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~ 1832 (2512)
T 2vz8_A 1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFP 1832 (2512)
T ss_dssp HHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEE
T ss_pred HHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEec
Confidence 99999999999999999864311 111123356689999987542 2345566665554 67788766 9999
Q ss_pred cccHHHHHHHHHcCCCcEEEEEEeCCc
Q 018094 330 ADYVNTALERLAKADVRYRFVIDVANT 356 (361)
Q Consensus 330 l~~~~~a~~~~~~~~~~gkvvi~~~~~ 356 (361)
++++++||+.+.+++..||+|++++.+
T Consensus 1833 l~ei~eA~~~l~~g~~~GKvVi~~~~~ 1859 (2512)
T 2vz8_A 1833 RTKVEAAFRYMAQGKHIGKVVIQVREE 1859 (2512)
T ss_dssp SSTHHHHHHHHHTTCCSSEEEEECSCC
T ss_pred HHHHHHHHHhhhccCccceEEEECCCc
Confidence 999999999999999999999999754
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=166.14 Aligned_cols=176 Identities=21% Similarity=0.273 Sum_probs=130.2
Q ss_pred CceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 018094 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225 (361)
Q Consensus 147 ~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~ 225 (361)
+.++++|+++++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|++|+++++++++... ++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~-~~ 80 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LS 80 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HH
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HH
Confidence 5689999999999999999999999999988788999999999996 999999999999999999999988776544 47
Q ss_pred HcCCcEEecCCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEE
Q 018094 226 RLGADSFLVSRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIV 298 (361)
Q Consensus 226 ~~g~~~v~~~~~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i 298 (361)
++|++.+++..+.+ .+.+.+. ++|++||++|... +..++++++++|+++.+|.... ...++.. ++.+++++
T Consensus 81 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~ 158 (198)
T 1pqw_A 81 RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAKSASF 158 (198)
T ss_dssp TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTTTCEE
T ss_pred HcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchHH-HHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcCCcEE
Confidence 88998888876543 3334332 6999999998654 8899999999999999987542 2223332 34688888
Q ss_pred Eeccc------CC---HHHHHHHHHHHHcCCCceee
Q 018094 299 GGSMI------GG---MKETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 299 ~g~~~------~~---~~~~~~~~~~l~~~~l~~~~ 325 (361)
.++.. .. .+.++++++++++|++++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~ 194 (198)
T 1pqw_A 159 SVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP 194 (198)
T ss_dssp EECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred EEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence 86422 11 35688899999999998764
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=99.13 E-value=1.1e-12 Score=122.97 Aligned_cols=181 Identities=16% Similarity=0.180 Sum_probs=130.4
Q ss_pred cccccccEEEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc
Q 018094 69 VPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF 148 (361)
Q Consensus 69 ~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 148 (361)
..|+|.++.|..+|++++++.+|+++++.... . .+. .....|++++|+..+...
T Consensus 76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk----------~-----------~~~-----~~~~~G~~~~~~~~~~~~ 129 (404)
T 1gpj_A 76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVK----------K-----------AYD-----RAARLGTLDEALKIVFRR 129 (404)
T ss_dssp EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH----------H-----------HHH-----HHHHHTCCCHHHHHHHHH
T ss_pred ecCchHhhhheeeccCCCCCcCCcchhHHHHH----------H-----------HHH-----HHHHcCCchHHHHHHHHH
Confidence 57999999999999999999999987431100 0 000 012346788888888888
Q ss_pred eEECCCCCCcccccccchhhhhhhHHHHhhCC---CCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH
Q 018094 149 VVRIPEGTPLDATAPLLCAGITVYSPLRFYGL---DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI 224 (361)
Q Consensus 149 v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~---~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~ 224 (361)
++.+|+.++.+.++. ..+..++|.++..... -.+|++|+|+|+|.+|.++++.++..|+ +|+++.++.++..+++
T Consensus 130 a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la 208 (404)
T 1gpj_A 130 AINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELA 208 (404)
T ss_dssp HHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH
T ss_pred HhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 999999887777654 3355566766643221 1579999999999999999999999999 9999999888776777
Q ss_pred HHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH--HHHHh--h--ccCCEEEEecCC
Q 018094 225 ERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM--PLIGL--L--KSQGKLVLVGAP 280 (361)
Q Consensus 225 ~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~ 280 (361)
+++|++ +++.. .+.+...++|+||++++....+. ..+.. + ++++.++.++..
T Consensus 209 ~~~g~~-~~~~~---~l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 209 RDLGGE-AVRFD---ELVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp HHHTCE-ECCGG---GHHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred HHcCCc-eecHH---hHHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 889976 33332 23334458999999998765432 45555 4 567777777654
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.03 E-value=8e-10 Score=96.42 Aligned_cols=170 Identities=12% Similarity=0.016 Sum_probs=105.0
Q ss_pred CCCCCEEEEccc------cCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcc--
Q 018094 88 FKVGDKVGVGCM------VGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD-- 159 (361)
Q Consensus 88 ~~~Gd~V~~~~~------~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~-- 159 (361)
+++||||++.+. .-.|+.|.+|..|..+.|+.... ..|... +...++.|+.....
T Consensus 4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-----------~~G~~~------~~~~~~~p~~~~~~~~ 66 (248)
T 2yvl_A 4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-----------PEGVKI------NGFEVYRPTLEEIILL 66 (248)
T ss_dssp CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-----------CTTEEE------TTEEEECCCHHHHHHH
T ss_pred CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-----------CCCCEE------EEEEEeCCCHHHHHHh
Confidence 899999998873 34788889998888888875311 112211 23344444322111
Q ss_pred ---cccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCC--cE
Q 018094 160 ---ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA--DS 231 (361)
Q Consensus 160 ---~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~--~~ 231 (361)
..+.+..... +...+. ...++++++||.+|+| .|..+..+++. +.+|+.++.+++....+.+ ..+. ..
T Consensus 67 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 142 (248)
T 2yvl_A 67 GFERKTQIIYPKD-SFYIAL-KLNLNKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNV 142 (248)
T ss_dssp TSCCSSCCCCHHH-HHHHHH-HTTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTE
T ss_pred cCcCCCCcccchh-HHHHHH-hcCCCCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcE
Confidence 1111111222 223333 4457899999999998 69999999998 8899999988776544422 2343 11
Q ss_pred EecCCCHHHHHHhcCCccEEEEcCCCc-ccHHHHHHhhccCCEEEEec
Q 018094 232 FLVSRDQDEMQAAMGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 232 v~~~~~~~~~~~~~~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 278 (361)
.+...+........+++|+||...+.. ..+..+.+.|+++|+++...
T Consensus 143 ~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 143 KFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp EEECSCTTTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred EEEEcChhhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 121222111000113799999988766 66888999999999999874
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.01 E-value=2.2e-09 Score=99.42 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=94.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
++++|+|+|+|.+|+.+++.++.+|++|++++++.++...+.+.+|.....+..+.+.+.+...++|++|++++...
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~ 244 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA 244 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence 46899999999999999999999999999999998877666555777643444445555555568999999998653
Q ss_pred ---cHHHHHHhhccCCEEEEecCCCCC-------cccChHHHhhCCcEEEeccc------------CCHHHHHHHHHHHH
Q 018094 260 ---PLMPLIGLLKSQGKLVLVGAPEKP-------LELPAFSLLMGRKIVGGSMI------------GGMKETQEMIDFAA 317 (361)
Q Consensus 260 ---~~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~g~~~------------~~~~~~~~~~~~l~ 317 (361)
.....++.++++|.+++++...+. .+++...+..+++.+.+... .+...++.+++++.
T Consensus 245 ~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~l~~l~~ 324 (369)
T 2eez_A 245 PKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPYVLKLAE 324 (369)
T ss_dssp -CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHHHHHHHh
Confidence 156788999999999999875432 22333344567888777542 12234667778887
Q ss_pred cCC
Q 018094 318 KHN 320 (361)
Q Consensus 318 ~~~ 320 (361)
+|.
T Consensus 325 ~g~ 327 (369)
T 2eez_A 325 KGL 327 (369)
T ss_dssp HTT
T ss_pred cCh
Confidence 773
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.2e-09 Score=101.41 Aligned_cols=137 Identities=18% Similarity=0.150 Sum_probs=97.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
++++|+|+|+|.+|+.+++.++.+|++|++++++.++.+.+.+.+|.....+......+.+...++|+||+|++.+.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t 246 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA 246 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 589999999999999999999999999999999988776664557875333333334444555579999999986653
Q ss_pred ----HHHHHHhhccCCEEEEecCCCC-------CcccChHHHhhCCcEEEecccC------------CHHHHHHHHHHHH
Q 018094 261 ----LMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGRKIVGGSMIG------------GMKETQEMIDFAA 317 (361)
Q Consensus 261 ----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~------------~~~~~~~~~~~l~ 317 (361)
....++.++++|.+++++...+ +..++...+..+++.+.+.... +...++.+++++.
T Consensus 247 ~~li~~~~l~~mk~g~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~phl~~~~~~~as~~~~~~~~~~~~~l~~ 326 (377)
T 2vhw_A 247 PKLVSNSLVAHMKPGAVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVANMPASVPKTSTYALTNATMPYVLELAD 326 (377)
T ss_dssp CCCBCHHHHTTSCTTCEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBTTGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceecHHHHhcCCCCcEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecCCcchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 5778899999999999985432 2233333445678887665331 1122456667776
Q ss_pred cC
Q 018094 318 KH 319 (361)
Q Consensus 318 ~~ 319 (361)
+|
T Consensus 327 ~g 328 (377)
T 2vhw_A 327 HG 328 (377)
T ss_dssp HH
T ss_pred CC
Confidence 65
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-09 Score=99.87 Aligned_cols=134 Identities=19% Similarity=0.172 Sum_probs=96.1
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE--EecCCCHHHHHHhcCCccEEEEcCCCccc-
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 260 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~g~d~vid~~g~~~~- 260 (361)
+++|+|+|+|.+|+++++.++.+|++|++++++.++.+.+ ++++... +++.. .+.+.+...++|+||++++.+..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~DvVI~~~~~~~~~ 244 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYL-ETLFGSRVELLYSN-SAEIETAVAEADLLIGAVLVPGRR 244 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHGGGSEEEECC-HHHHHHHHHTCSEEEECCCCTTSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-HHhhCceeEeeeCC-HHHHHHHHcCCCEEEECCCcCCCC
Confidence 4899999999999999999999999999999998887666 4444332 33332 23333334489999999987542
Q ss_pred -----HHHHHHhhccCCEEEEecCCCC-------CcccChHHHhhCCcEEEecccC------------CHHHHHHHHHHH
Q 018094 261 -----LMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGRKIVGGSMIG------------GMKETQEMIDFA 316 (361)
Q Consensus 261 -----~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~------------~~~~~~~~~~~l 316 (361)
....++.++++|.+++++...+ ..+++...+..+++++.+.... +...++.+++++
T Consensus 245 ~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~~l~~l~ 324 (361)
T 1pjc_A 245 APILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLPYVVKLA 324 (361)
T ss_dssp CCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999987543 2234444456788888875421 123356777888
Q ss_pred HcC
Q 018094 317 AKH 319 (361)
Q Consensus 317 ~~~ 319 (361)
.+|
T Consensus 325 ~~G 327 (361)
T 1pjc_A 325 NQG 327 (361)
T ss_dssp HHG
T ss_pred hCC
Confidence 777
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3.6e-09 Score=98.44 Aligned_cols=156 Identities=15% Similarity=0.131 Sum_probs=107.4
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCC----------------------HH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRD----------------------QD 239 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~----------------------~~ 239 (361)
++++|+|+|+|.+|++++++++.+|++|++++++.++.+.+ +++|++.+ ++..+ .+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~-~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 68999999999999999999999999999999888776555 67998654 22211 11
Q ss_pred HHHHhcCCccEEEEcC---CCc--cc-HHHHHHhhccCCEEEEecCCC-CCcc--cChHHHhhCCcEEEecccCCHHHHH
Q 018094 240 EMQAAMGTMDGIIDTV---SAV--HP-LMPLIGLLKSQGKLVLVGAPE-KPLE--LPAFSLLMGRKIVGGSMIGGMKETQ 310 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~---g~~--~~-~~~~~~~l~~~G~~v~~g~~~-~~~~--~~~~~~~~~~~~i~g~~~~~~~~~~ 310 (361)
.+.+...++|+||+++ |.. .. ....++.|++++.+++++... +.+. .+...+..+++++.++........+
T Consensus 250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~~~~~ 329 (384)
T 1l7d_A 250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAA 329 (384)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGGGGHH
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcchhHH
Confidence 2455566899999999 532 22 377899999999999998643 2322 2333456789999998764333456
Q ss_pred HHHHHHHcCCCceee----E---EEecccHHHHHHH
Q 018094 311 EMIDFAAKHNIRADI----E---VIPADYVNTALER 339 (361)
Q Consensus 311 ~~~~~l~~~~l~~~~----~---~~~l~~~~~a~~~ 339 (361)
.+.+++.++.+.... + .+.++.-.++++.
T Consensus 330 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 365 (384)
T 1l7d_A 330 DASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSG 365 (384)
T ss_dssp HHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhc
Confidence 688888887544321 1 4444444555554
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=2.6e-08 Score=92.89 Aligned_cols=136 Identities=18% Similarity=0.138 Sum_probs=93.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCC-------------CHH-------HH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSR-------------DQD-------EM 241 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~-------------~~~-------~~ 241 (361)
++++|+|+|+|.+|+.++++|+.+|++|++++++.++.+.+ +++|++.+. +.. +.+ .+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 58899999999999999999999999999999988876655 788886542 111 111 24
Q ss_pred HHhcCCccEEEEcCCCc-----cc-HHHHHHhhccCCEEEEecCC-CCCcccCh--H-HHhhCCcEEEecccCCHHHH-H
Q 018094 242 QAAMGTMDGIIDTVSAV-----HP-LMPLIGLLKSQGKLVLVGAP-EKPLELPA--F-SLLMGRKIVGGSMIGGMKET-Q 310 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~~~~~~--~-~~~~~~~~i~g~~~~~~~~~-~ 310 (361)
.+...++|+||++++.+ .. ....++.|++++.+++++.. ++.+.... . .+..+++++.|.... +..+ +
T Consensus 250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~-p~~~~~ 328 (401)
T 1x13_A 250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDL-PGRLPT 328 (401)
T ss_dssp HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCT-GGGSHH
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCC-cccCHH
Confidence 44445799999995331 22 36789999999999999864 33333321 2 145689999997653 2223 2
Q ss_pred HHHHHHHcCC
Q 018094 311 EMIDFAAKHN 320 (361)
Q Consensus 311 ~~~~~l~~~~ 320 (361)
.+.+++.++.
T Consensus 329 ~a~~ll~~~~ 338 (401)
T 1x13_A 329 QSSQLYGTNL 338 (401)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhH
Confidence 3555555553
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=8.2e-08 Score=91.25 Aligned_cols=173 Identities=17% Similarity=0.138 Sum_probs=114.9
Q ss_pred hhhhhhHHHHhhC-CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc
Q 018094 167 AGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM 245 (361)
Q Consensus 167 ~~~~a~~~l~~~~-~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~ 245 (361)
...++|+++.+.. ...+|++|+|+|.|.+|..+++.++.+|++|+++++++.+... ++++|++ ++ +. .++.
T Consensus 256 ~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~-A~~~Ga~-~~---~l---~e~l 327 (494)
T 3ce6_A 256 TRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQ-AMMEGFD-VV---TV---EEAI 327 (494)
T ss_dssp HHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTTCE-EC---CH---HHHG
T ss_pred hhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCE-Ee---cH---HHHH
Confidence 3455666665443 2578999999999999999999999999999999988776544 4678885 22 22 2334
Q ss_pred CCccEEEEcCCCcccHH-HHHHhhccCCEEEEecCCCCCcccChHHHhhCCc---EEEecccC-CHHHHHHHHHHHHcCC
Q 018094 246 GTMDGIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRK---IVGGSMIG-GMKETQEMIDFAAKHN 320 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~---~i~g~~~~-~~~~~~~~~~~l~~~~ 320 (361)
.++|+|+++++....+. ..++.++++|+++++|... ..++...+..+.+ ++.+.... ...++.+.+.++.+++
T Consensus 328 ~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~--~eId~~aL~~~aL~~~~I~~~ldv~~~~~~~~~l~LL~~gr 405 (494)
T 3ce6_A 328 GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFD--NEIDMAGLERSGATRVNVKPQVDLWTFGDTGRSIIVLSEGR 405 (494)
T ss_dssp GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSG--GGBCHHHHHHTTCEEEEEETTEEEEECTTTCCEEEEEGGGS
T ss_pred hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCC--CccCHHHHHHhhhccceEEEEEEEeecCCcchHHHHHhCCC
Confidence 57999999999887666 7889999999999998754 2456666655444 45443210 0011122333444555
Q ss_pred Cc------eee-----EEEecccHHHHHHHHHcCCCcEEEE
Q 018094 321 IR------ADI-----EVIPADYVNTALERLAKADVRYRFV 350 (361)
Q Consensus 321 l~------~~~-----~~~~l~~~~~a~~~~~~~~~~gkvv 350 (361)
+. |.+ +.+ ++++.++++.+.+++..++.|
T Consensus 406 lvnL~~~TPH~a~~~~~s~-~~qa~~ai~~~~~g~~~~~~V 445 (494)
T 3ce6_A 406 LLNLGNATGHPSFVMSNSF-ANQTIAQIELWTKNDEYDNEV 445 (494)
T ss_dssp CHHHHHSCCSCHHHHHHHH-HHHHHHHHHHHHTGGGCCSSE
T ss_pred EEeccCCCCCccccchHHH-HHHHHHHHHHHHcCCCCCCEE
Confidence 43 111 223 567788888887766555444
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.1e-07 Score=75.64 Aligned_cols=105 Identities=18% Similarity=0.158 Sum_probs=77.9
Q ss_pred hhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
.++.+++.... ..+++|+|+|+|.+|.+.++.++..|++|++..++.++..+++++++.+. ....+. .+...++|
T Consensus 8 v~~~a~~~~~~-~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~~~---~~~~~~~D 82 (144)
T 3oj0_A 8 IPSIVYDIVRK-NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLINDI---DSLIKNND 82 (144)
T ss_dssp HHHHHHHHHHH-HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECSCH---HHHHHTCS
T ss_pred HHHHHHHHHHh-ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-EeecCH---HHHhcCCC
Confidence 34555554432 45899999999999999999998899999999999888888888888643 233332 22334699
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+||.+++....+.. ...+++++.++.++.+
T Consensus 83 ivi~at~~~~~~~~-~~~l~~g~~vid~~~p 112 (144)
T 3oj0_A 83 VIITATSSKTPIVE-ERSLMPGKLFIDLGNP 112 (144)
T ss_dssp EEEECSCCSSCSBC-GGGCCTTCEEEECCSS
T ss_pred EEEEeCCCCCcEee-HHHcCCCCEEEEccCC
Confidence 99999998753322 2678899999999864
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.53 E-value=6.8e-07 Score=82.47 Aligned_cols=121 Identities=19% Similarity=0.202 Sum_probs=86.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec-------------CCC----------HH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV-------------SRD----------QD 239 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~-------------~~~----------~~ 239 (361)
++.+|+|+|+|.+|+.++++++.+|++|++.+++.++++.+ +++|++.+.. +.. .+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV-ASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH-HHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 57899999999999999999999999999999998876555 6788753211 110 12
Q ss_pred HHHHhcCCccEEEEcCCCc------ccHHHHHHhhccCCEEEEecCC-CCCccc--ChHHHhhCCcEEEecccC
Q 018094 240 EMQAAMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLVGAP-EKPLEL--PAFSLLMGRKIVGGSMIG 304 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~-~~~~~~--~~~~~~~~~~~i~g~~~~ 304 (361)
.+.+...++|+||.++..+ ...+..++.|++++.+++++.. ++.+.. +...+..+++.+.+....
T Consensus 268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nl 341 (405)
T 4dio_A 268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNV 341 (405)
T ss_dssp HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSG
T ss_pred HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCC
Confidence 3334445899999996432 1357899999999999999853 333322 112244578899887653
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.46 E-value=7.4e-07 Score=81.58 Aligned_cols=120 Identities=18% Similarity=0.192 Sum_probs=86.0
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec---------CC----------CHHHHHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV---------SR----------DQDEMQA 243 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~---------~~----------~~~~~~~ 243 (361)
++.+|+|+|+|.+|+.+++.++.+|++|++.+++.++.+.+ +++|++.+.. +. ..+.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV-RSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH-HHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 67899999999999999999999999999999998887666 6788754310 00 1123444
Q ss_pred hcCCccEEEEcCCCc------ccHHHHHHhhccCCEEEEecCCCC-Cccc--ChHHHhhCCcEEEeccc
Q 018094 244 AMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLVGAPEK-PLEL--PAFSLLMGRKIVGGSMI 303 (361)
Q Consensus 244 ~~~g~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~-~~~~--~~~~~~~~~~~i~g~~~ 303 (361)
...++|+||.++..+ ...+..++.+++++.+++++...+ .+.. +...+..+++.+.+...
T Consensus 262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~n 330 (381)
T 3p2y_A 262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLN 330 (381)
T ss_dssp HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSC
T ss_pred HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCC
Confidence 556899999986332 124789999999999999986443 3321 11224457788887654
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.3e-05 Score=69.89 Aligned_cols=112 Identities=17% Similarity=0.179 Sum_probs=82.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-.|++|+|+|.|.+|..+++.++.+|++|++.+++.++...+ +++|+..+ +. +.+.++..++|+|+.++.....-
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~-~~---~~l~~~l~~aDvVi~~~p~~~i~ 227 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARI-AEMGMEPF-HI---SKAAQELRDVDVCINTIPALVVT 227 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTSEEE-EG---GGHHHHTTTCSEEEECCSSCCBC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHCCCeec-Ch---hhHHHHhcCCCEEEECCChHHhC
Confidence 478999999999999999999999999999999987765444 56786532 21 23445557899999999865434
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEe
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGG 300 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g 300 (361)
...+..+++++.+++++..+....+ .....+++.+..
T Consensus 228 ~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~~ 264 (293)
T 3d4o_A 228 ANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKALL 264 (293)
T ss_dssp HHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEEE
Confidence 5678889999999999864443333 333445666553
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.2e-05 Score=74.36 Aligned_cols=104 Identities=19% Similarity=0.201 Sum_probs=79.1
Q ss_pred hhHHHHhhC-CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 171 VYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 171 a~~~l~~~~-~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
.+.++.+.. ..-.|++|+|+|.|.+|...++.++.+|++|+++.+++.+..+. ...|... . .+.++..+.|
T Consensus 206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A-~~~G~~v-~------~Leeal~~AD 277 (435)
T 3gvp_A 206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQA-CMDGFRL-V------KLNEVIRQVD 277 (435)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE-C------CHHHHTTTCS
T ss_pred HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHH-HHcCCEe-c------cHHHHHhcCC
Confidence 345554443 34589999999999999999999999999999988876554333 4556432 1 1345556899
Q ss_pred EEEEcCCCcccHH-HHHHhhccCCEEEEecCCCC
Q 018094 250 GIIDTVSAVHPLM-PLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 250 ~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 282 (361)
+++.|.|..+.+. ..+..|++++.++++|....
T Consensus 278 IVi~atgt~~lI~~e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 278 IVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp EEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred EEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence 9999988777665 78999999999999987643
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.21 E-value=1.5e-05 Score=60.36 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=68.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
.+.+|+|+|+|.+|...++.+...| .+|++++++.++...+ +..+... ..+..+.+.+.+...++|+||++++....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL-NRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH-HTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH-HhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 3568999999999999999999999 7999999988776555 3456543 34555666677777799999999987653
Q ss_pred HHHHHHhhccCCEEEEe
Q 018094 261 LMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~ 277 (361)
......+.+.+-.++.+
T Consensus 83 ~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp HHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHhCCCEEEe
Confidence 33344444555566554
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=5.9e-06 Score=66.35 Aligned_cols=94 Identities=11% Similarity=0.110 Sum_probs=65.4
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCC
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVS 256 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g 256 (361)
....++++|+|+|+|.+|...++.++..|.+|++++++.++...+.++.|...+. +..+.+.+.+. ..++|+||.+++
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 3346789999999999999999999999999999999887765442145654432 23334444443 347999999999
Q ss_pred CcccHHHHHHhhcc-CC
Q 018094 257 AVHPLMPLIGLLKS-QG 272 (361)
Q Consensus 257 ~~~~~~~~~~~l~~-~G 272 (361)
...........++. ++
T Consensus 94 ~~~~~~~~~~~~~~~~~ 110 (155)
T 2g1u_A 94 DDSTNFFISMNARYMFN 110 (155)
T ss_dssp CHHHHHHHHHHHHHTSC
T ss_pred CcHHHHHHHHHHHHHCC
Confidence 87644455555554 44
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.13 E-value=1.2e-05 Score=70.69 Aligned_cols=99 Identities=20% Similarity=0.259 Sum_probs=77.5
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~ 250 (361)
-+|+++||.|+ +++|.+.++.+...|++|++++++.++..+.++++|.+.. .|-.+++.+.++ .+++|+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47899999997 9999999999999999999999999998888889886432 355555443332 357999
Q ss_pred EEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 251 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.++++|... ..+.++..|+++|+++.++..
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~ 161 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST 161 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence 999998642 234466678899999999764
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.1e-05 Score=68.47 Aligned_cols=111 Identities=16% Similarity=0.191 Sum_probs=81.9
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-.+++|+|+|.|.+|..+++.++.+|++|++.+++.++...+ +++|... ++. ..+.++..++|+|+.++.....-
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~-~~~---~~l~~~l~~aDvVi~~~p~~~i~ 229 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARI-TEMGLVP-FHT---DELKEHVKDIDICINTIPSMILN 229 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCEE-EEG---GGHHHHSTTCSEEEECCSSCCBC
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCeE-Ech---hhHHHHhhCCCEEEECCChhhhC
Confidence 478999999999999999999999999999999987765444 4577642 222 23445567899999999875534
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEE
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG 299 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 299 (361)
...+..+++++.+++++..+....+ .....+++.+.
T Consensus 230 ~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i 265 (300)
T 2rir_A 230 QTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL 265 (300)
T ss_dssp HHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred HHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence 5677889999999999875444333 33344556554
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.03 E-value=4.8e-05 Score=70.55 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=77.1
Q ss_pred hhHHHHhh-CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 171 VYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 171 a~~~l~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
.+.++.+. ...-.|++|+|+|.|.+|..+++.++.+|++|+++..++.+..+. ...|... . + +.++....|
T Consensus 233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A-~~~G~~v-v---~---LeElL~~AD 304 (464)
T 3n58_A 233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA-AMDGFEV-V---T---LDDAASTAD 304 (464)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEE-C---C---HHHHGGGCS
T ss_pred HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH-HhcCcee-c---c---HHHHHhhCC
Confidence 34444443 334689999999999999999999999999999998776544333 3456532 1 1 234455799
Q ss_pred EEEEcCCCcccH-HHHHHhhccCCEEEEecCCC
Q 018094 250 GIIDTVSAVHPL-MPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 250 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~ 281 (361)
+|+.+.|+.+.+ ...+..|++++.++++|...
T Consensus 305 IVv~atgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 305 IVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp EEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred EEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 999999887654 57889999999999998754
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.03 E-value=3.8e-05 Score=63.28 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=68.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh--cCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA--MGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~--~~g~d~vid~~g~~ 258 (361)
.+++|+|+|.|.+|...++.++.. |.+|+++++++++...+ ++.|...+. +..+.+.+.++ ..++|+||.+++..
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~-~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~ 116 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH-RSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH 116 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH-HHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH-HHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence 367899999999999999999998 99999999998876655 567876543 44555556665 45899999999976
Q ss_pred ccHHHHHHhhc---cCCEEEEe
Q 018094 259 HPLMPLIGLLK---SQGKLVLV 277 (361)
Q Consensus 259 ~~~~~~~~~l~---~~G~~v~~ 277 (361)
.........++ +..+++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 117 QGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEE
Confidence 53333334443 44466654
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=98.02 E-value=3.1e-05 Score=68.35 Aligned_cols=186 Identities=18% Similarity=0.110 Sum_probs=101.9
Q ss_pred eCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccC--ceEECCCCCCc
Q 018094 81 VGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEH--FVVRIPEGTPL 158 (361)
Q Consensus 81 vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~v~~iP~~~~~ 158 (361)
||+....+++||+|++.... .+..+..+..|....+....+... ......|.+.+.++.. ....-|+...+
T Consensus 13 ~~~~~~~~~~gd~v~i~~~~-~~~~~~~~~~~~~~~~~~g~~~~~------~i~g~~~g~~~~~~~~~~~~~~~p~~~~~ 85 (277)
T 1o54_A 13 VGKVADTLKPGDRVLLSFED-ESEFLVDLEKDKKLHTHLGIIDLN------EVFEKGPGEIIRTSAGKKGYILIPSLIDE 85 (277)
T ss_dssp CCCGGGCCCTTCEEEEEETT-SCEEEEECCTTCEEEETTEEEEHH------HHTTSCTTCEEECTTCCEEEEECCCHHHH
T ss_pred cccccCCCCCCCEEEEEECC-CcEEEEEEcCCCEEecCCceEEHH------HhcCCCCCcEEEEcCCcEEEEeCCCHHHH
Confidence 56666779999999875322 222333333333222222211110 0112234455555544 33444543222
Q ss_pred ccccc----cchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHH---HcCC
Q 018094 159 DATAP----LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIE---RLGA 229 (361)
Q Consensus 159 ~~aa~----l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~---~~g~ 229 (361)
.++.. ..... .+ ..+.....++++++||-+|+|. |..+..+++.. +.+|+.++.+++....+.+ ..+.
T Consensus 86 ~~~~~~~~~~~~~~-~~-~~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 162 (277)
T 1o54_A 86 IMNMKRRTQIVYPK-DS-SFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL 162 (277)
T ss_dssp HHTCCC-CCCCCHH-HH-HHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred HhhccccCCccCHH-HH-HHHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC
Confidence 22110 01111 11 1233344578999999999877 88888999885 4699999888765543322 3353
Q ss_pred -c-EEecCCCHHHHHHhc-CCccEEEEcCCCc-ccHHHHHHhhccCCEEEEec
Q 018094 230 -D-SFLVSRDQDEMQAAM-GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 230 -~-~v~~~~~~~~~~~~~-~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 278 (361)
+ ..+...+.... .. +.+|+|+...... ..+..+.+.|+++|.++...
T Consensus 163 ~~~v~~~~~d~~~~--~~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 163 IERVTIKVRDISEG--FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp GGGEEEECCCGGGC--CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEEECCHHHc--ccCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 1 11222221111 22 3699999876655 55788999999999998874
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.97 E-value=5.4e-06 Score=72.87 Aligned_cols=94 Identities=19% Similarity=0.213 Sum_probs=66.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+++.+||.+|+|. |..+..+++.. +.+|+.++.+++....+ ++.+.. .++.. +...+....+.+|+|+.... ..
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a-~~~~~~~~~~~~-d~~~~~~~~~~fD~v~~~~~-~~ 159 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAA-AKRYPQVTFCVA-SSHRLPFSDTSMDAIIRIYA-PC 159 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHH-HHHCTTSEEEEC-CTTSCSBCTTCEEEEEEESC-CC
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHH-HHhCCCcEEEEc-chhhCCCCCCceeEEEEeCC-hh
Confidence 5788999999987 99999999986 77999999988776555 444432 22222 21111111236999996544 45
Q ss_pred cHHHHHHhhccCCEEEEecC
Q 018094 260 PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~ 279 (361)
.+..+.+.|+|+|+++.+..
T Consensus 160 ~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 160 KAEELARVVKPGGWVITATP 179 (269)
T ss_dssp CHHHHHHHEEEEEEEEEEEE
T ss_pred hHHHHHHhcCCCcEEEEEEc
Confidence 69999999999999988754
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=8.4e-05 Score=68.97 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=79.8
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-.|++|+|+|.|.+|...++.++.+|++|+++++++.+...+ ...|...+ .+.++....|+++.+.+....+
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A-~~~G~~~~-------sL~eal~~ADVVilt~gt~~iI 280 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQA-AMEGYQVL-------LVEDVVEEAHIFVTTTGNDDII 280 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-------CHHHHTTTCSEEEECSSCSCSB
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHH-HHhCCeec-------CHHHHHhhCCEEEECCCCcCcc
Confidence 479999999999999999999999999999988876554333 45565321 2445566899999998876544
Q ss_pred H-HHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEE
Q 018094 262 M-PLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVG 299 (361)
Q Consensus 262 ~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~ 299 (361)
. ..+..|+++..++++|.. ...++...+..+..+..
T Consensus 281 ~~e~l~~MK~gAIVINvgRg--~vEID~~~L~~~~~~~~ 317 (436)
T 3h9u_A 281 TSEHFPRMRDDAIVCNIGHF--DTEIQVAWLKANAKERV 317 (436)
T ss_dssp CTTTGGGCCTTEEEEECSSS--GGGBCHHHHHHHCSEEE
T ss_pred CHHHHhhcCCCcEEEEeCCC--CCccCHHHHHhhcCceE
Confidence 4 677889999999999743 44556655555444433
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=8.4e-05 Score=70.03 Aligned_cols=101 Identities=19% Similarity=0.159 Sum_probs=74.8
Q ss_pred hHHHHhhCCC-CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018094 172 YSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 172 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~ 250 (361)
+.++.+.... -.|++++|+|+|.+|...++.++..|++|+++++++.+..++ ...|.+ +. +. .+....+|+
T Consensus 252 ~dgi~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~A-a~~g~d-v~---~l---ee~~~~aDv 323 (488)
T 3ond_A 252 PDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-TMEGLQ-VL---TL---EDVVSEADI 323 (488)
T ss_dssp HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCE-EC---CG---GGTTTTCSE
T ss_pred HHHHHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHhCCc-cC---CH---HHHHHhcCE
Confidence 3344333332 479999999999999999999999999999998887665544 345543 21 11 223447999
Q ss_pred EEEcCCCcccHH-HHHHhhccCCEEEEecCC
Q 018094 251 IIDTVSAVHPLM-PLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 280 (361)
++++.|....+. ..+..+++++.++++|..
T Consensus 324 Vi~atG~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 324 FVTTTGNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp EEECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred EEeCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 999999876554 488899999999999865
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00014 Score=63.43 Aligned_cols=98 Identities=19% Similarity=0.274 Sum_probs=72.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.|+++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++ .+++|++
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5789999997 9999999999999999999999998888777777764322 344555443322 3579999
Q ss_pred EEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 252 IDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 252 id~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++++|... ..+.++..++++|+++.++..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 140 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV 140 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence 99988632 122344455678999999764
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00014 Score=64.41 Aligned_cols=100 Identities=16% Similarity=0.252 Sum_probs=71.7
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCcEE-ecCCCHHHHHHhcCCccEEEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGADSF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
...++++++||.+|+|+.++.++.+++..|++|+.++.+++....+. ++.|.+.+ +...+...+ ..+.||+||.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l--~d~~FDvV~~ 194 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI--DGLEFDVLMV 194 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG--GGCCCSEEEE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC--CCCCcCEEEE
Confidence 45689999999999998888888888888999999999987654432 23454222 222222221 1357999997
Q ss_pred cCCCc---ccHHHHHHhhccCCEEEEecC
Q 018094 254 TVSAV---HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 254 ~~g~~---~~~~~~~~~l~~~G~~v~~g~ 279 (361)
....+ ..+..+.+.|+|+|+++....
T Consensus 195 ~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 195 AALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 66543 357788899999999997753
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00044 Score=60.03 Aligned_cols=98 Identities=12% Similarity=0.216 Sum_probs=70.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++.++..++ .|.+.. .|-.+++.+.++ .++.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 9999999999999999999999998877666554 454432 355555444332 3579
Q ss_pred cEEEEcCCCcc--------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 249 DGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 249 d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
|++++++|... ..+.++..| +.+|++|.+++.
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ 145 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI 145 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEech
Confidence 99999998421 123345555 346899999764
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00034 Score=60.91 Aligned_cols=75 Identities=19% Similarity=0.343 Sum_probs=58.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..+..++++.... .|-.+.+.+.++ .+++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999997 9999999999999999999999998887777777765322 345555444332 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 87 v~~Ag~ 92 (259)
T 4e6p_A 87 VNNAAL 92 (259)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999986
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00052 Score=59.33 Aligned_cols=75 Identities=21% Similarity=0.266 Sum_probs=58.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..++++.... .|-.+.+.+.++ .+++|++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 5789999997 9999999999999999999999998888777777775433 244454433332 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
++++|.
T Consensus 85 v~nAg~ 90 (247)
T 3rwb_A 85 VNNASI 90 (247)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00038 Score=61.00 Aligned_cols=76 Identities=25% Similarity=0.371 Sum_probs=59.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++ .+++|++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL 105 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999997 9999999999999999999999998888888778776432 244555443332 2489999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
|+++|..
T Consensus 106 vnnAg~~ 112 (266)
T 3grp_A 106 VNNAGIT 112 (266)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9999863
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00036 Score=61.33 Aligned_cols=75 Identities=19% Similarity=0.249 Sum_probs=58.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++ .+++|++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999997 999999999999999999999999888878777776432 2355555444333 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 107 VnnAg~ 112 (272)
T 4dyv_A 107 FNNAGT 112 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999986
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00041 Score=60.28 Aligned_cols=98 Identities=22% Similarity=0.262 Sum_probs=70.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
.|+++||.|+ +++|.+.++.+...|++|++++++.++..+.++++ |.+.. .|-.+++.+.++ .++.
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 6899999997 99999999999999999999999988766655443 54432 244455443332 2479
Q ss_pred cEEEEcCCCcc-------------------------cHHHHHHhh---ccCCEEEEecCC
Q 018094 249 DGIIDTVSAVH-------------------------PLMPLIGLL---KSQGKLVLVGAP 280 (361)
Q Consensus 249 d~vid~~g~~~-------------------------~~~~~~~~l---~~~G~~v~~g~~ 280 (361)
|+.++++|... ..+.++..| ..+|+++.++..
T Consensus 88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~ 147 (255)
T 4g81_D 88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL 147 (255)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence 99999998643 123345555 246899999864
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.66 E-value=7.7e-05 Score=64.23 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=69.3
Q ss_pred CCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc---EEecCCCHHHHHHh---cCCccEEEE
Q 018094 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAA---MGTMDGIID 253 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~---~~g~d~vid 253 (361)
+-+|+++||.|+ +++|.+.++.+...|++|++++++.++..+. .+.. ...|-.+++.++++ .+++|+.++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP---RHPRIRREELDITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC---CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh---hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 347999999997 9999999999999999999999987764321 2221 22455566555544 357999999
Q ss_pred cCCCcc-----------------------cHHHHHHhh-ccCCEEEEecCC
Q 018094 254 TVSAVH-----------------------PLMPLIGLL-KSQGKLVLVGAP 280 (361)
Q Consensus 254 ~~g~~~-----------------------~~~~~~~~l-~~~G~~v~~g~~ 280 (361)
++|... ..+.++..| +.+|++|++++.
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 135 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM 135 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence 998642 113344555 457999999864
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00046 Score=60.81 Aligned_cols=75 Identities=15% Similarity=0.265 Sum_probs=58.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++ .+++|++
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL 105 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999997 9999999999999999999999998887777777775432 345555443332 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 106 v~nAg~ 111 (277)
T 4dqx_A 106 VNNAGF 111 (277)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999985
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00048 Score=59.55 Aligned_cols=97 Identities=14% Similarity=0.091 Sum_probs=68.4
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE--EecCCCHHHHHHh-------cCCccEEEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++|||.|+ +++|.+.++.+...|++|+++++++++..++.++.+-.. ..|-.+++.+.++ .+++|+.++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 368999997 999999999999999999999999888777755543211 2344555443332 357999999
Q ss_pred cCCCcc-------------------------cHHHHHHhh-ccCCEEEEecCC
Q 018094 254 TVSAVH-------------------------PLMPLIGLL-KSQGKLVLVGAP 280 (361)
Q Consensus 254 ~~g~~~-------------------------~~~~~~~~l-~~~G~~v~~g~~ 280 (361)
++|... ..+.++..| +.+|+++.+++.
T Consensus 82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~ 134 (247)
T 3ged_A 82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIAST 134 (247)
T ss_dssp CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeec
Confidence 997642 112233344 567999999764
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00072 Score=52.91 Aligned_cols=96 Identities=19% Similarity=0.161 Sum_probs=69.1
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~~ 259 (361)
+-.++|+|+|.|.+|...++.++..|.+|+++++++++..++ ++.|...+. |..+++.+.+. ..++|+++-+++...
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~-~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~ 83 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL-RERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY 83 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-HHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence 345789999999999999999999999999999998887665 567776543 34455555544 247999999999864
Q ss_pred cHH---HHHHhhccCCEEEEec
Q 018094 260 PLM---PLIGLLKSQGKLVLVG 278 (361)
Q Consensus 260 ~~~---~~~~~l~~~G~~v~~g 278 (361)
... ...+.+.+..+++...
T Consensus 84 ~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 84 EAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEEE
Confidence 222 2334455666666543
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00057 Score=59.12 Aligned_cols=75 Identities=21% Similarity=0.340 Sum_probs=57.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE----EecCCCHHHHHHh------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS----FLVSRDQDEMQAA------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~----v~~~~~~~~~~~~------~~g~d~v 251 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.++++... ..|..+.+.+.++ .+++|++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence 5688999998 999999999999999999999999877666666665432 1344555444433 2579999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 90 i~~Ag~ 95 (254)
T 2wsb_A 90 VNSAGI 95 (254)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999985
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00034 Score=60.54 Aligned_cols=75 Identities=23% Similarity=0.337 Sum_probs=57.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++ .+++|++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999997 999999999999999999999999888777766665422 2355555444332 2489999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
++++|.
T Consensus 88 v~nAg~ 93 (248)
T 3op4_A 88 VNNAGI 93 (248)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00043 Score=61.03 Aligned_cols=75 Identities=17% Similarity=0.295 Sum_probs=58.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++ .+++|++
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999997 999999999999999999999999888877777776432 2355555443332 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
++++|.
T Consensus 108 vnnAg~ 113 (277)
T 3gvc_A 108 VANAGV 113 (277)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999986
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00046 Score=60.10 Aligned_cols=99 Identities=13% Similarity=0.247 Sum_probs=68.2
Q ss_pred CCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCC-cE---EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA-DS---FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~-~~---v~~~~~~~~~~~~-------~ 245 (361)
.|+++||.|+ | ++|.+.++.+...|++|+++.++++...++.+ +++. .. ..|-.+++.+.++ .
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6899999996 5 89999999999999999999998876655543 3342 21 2355555443322 3
Q ss_pred CCccEEEEcCCCcc-----------------------------cHHHHHHhhccCCEEEEecCCC
Q 018094 246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 246 ~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+++|++++++|... ..+.....++.+|++|.+++..
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~ 149 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLG 149 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGG
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 57999999988521 0012334567889999997643
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0011 Score=56.96 Aligned_cols=75 Identities=20% Similarity=0.337 Sum_probs=57.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcE-EecCCCHHHHHHhc---CCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAM---GTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~~---~g~d~vid~~g 256 (361)
+++++||.|+ |.+|...++.+...|++|++++++.++..++.+++. .+. ..|-.+.+.+.++. +++|++|+++|
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 5788999998 999999999999999999999998877666655553 322 23555666555543 36899999998
Q ss_pred C
Q 018094 257 A 257 (361)
Q Consensus 257 ~ 257 (361)
.
T Consensus 86 ~ 86 (244)
T 3d3w_A 86 V 86 (244)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00059 Score=58.86 Aligned_cols=75 Identities=19% Similarity=0.363 Sum_probs=57.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++|...+ .|-.+.+.+.++ .+++|++|+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999998 9999999999999999999999998877776666664322 355555444332 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 84 ~Ag~ 87 (245)
T 1uls_A 84 YAGI 87 (245)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0013 Score=56.91 Aligned_cols=75 Identities=16% Similarity=0.259 Sum_probs=55.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~ 250 (361)
.++++||.|+ |.+|...++.+...|++|++++++. ++..+..++.+... ..|-.+.+.+.++ .+++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 4678999997 9999999999999999999999987 65544445556432 2355555544433 357999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+|+++|.
T Consensus 86 lv~nAg~ 92 (249)
T 2ew8_A 86 LVNNAGI 92 (249)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999985
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00043 Score=62.01 Aligned_cols=106 Identities=13% Similarity=0.208 Sum_probs=69.3
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHHcC----Cc-EEecCCCHHHHH
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAIERLG----AD-SFLVSRDQDEMQ 242 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~---~~~~~~~~~~~g----~~-~v~~~~~~~~~~ 242 (361)
..+|.....--.++++||+|+|++|.+++..+...|+ +|+++.++ .++.++++++++ .. .+++..+.+.+.
T Consensus 142 ~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~ 221 (315)
T 3tnl_A 142 MRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLR 221 (315)
T ss_dssp HHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred HHHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHH
Confidence 3445443322468899999999999999999999999 89999998 667666665543 21 234455544444
Q ss_pred HhcCCccEEEEcCCCcccHH-----H-HHHhhccCCEEEEe
Q 018094 243 AAMGTMDGIIDTVSAVHPLM-----P-LIGLLKSQGKLVLV 277 (361)
Q Consensus 243 ~~~~g~d~vid~~g~~~~~~-----~-~~~~l~~~G~~v~~ 277 (361)
+....+|+||+++.....-. . ....++++..++++
T Consensus 222 ~~l~~aDiIINaTp~Gm~~~~~~~p~~~~~~l~~~~~V~Dl 262 (315)
T 3tnl_A 222 KEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDV 262 (315)
T ss_dssp HHHHTCSEEEECSSTTSTTSTTCCSCCCGGGCCTTCEEEES
T ss_pred hhhcCCCEEEECccCCCCCCCCCCCCCcHHHcCCCCEEEEe
Confidence 44557999999986432100 0 23345666555555
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00032 Score=62.01 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=54.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC---C-c-E--EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---A-D-S--FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g---~-~-~--v~~~~~~~~~~~~-------~~g 247 (361)
.|+++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++. . . . ..|-.+.+.+.++ .++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6789999997 999999999999999999999999887666655442 1 1 1 2355555443332 257
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 112 iD~lvnnAG~ 121 (281)
T 4dry_A 112 LDLLVNNAGS 121 (281)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999986
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00096 Score=58.25 Aligned_cols=75 Identities=20% Similarity=0.367 Sum_probs=56.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++ .+++|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 4678999998 999999999999999999999999887777766665322 2355555443332 2478999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 85 vnnAg~ 90 (263)
T 2a4k_A 85 AHFAGV 90 (263)
T ss_dssp EEGGGG
T ss_pred EECCCC
Confidence 999874
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00061 Score=59.37 Aligned_cols=75 Identities=20% Similarity=0.227 Sum_probs=56.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHhc-------CCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM-------GTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~-------~g~d~v 251 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++.... ..|-.+.+.+.++. +++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4688999997 999999999999999999999999877766655554321 23555555444332 479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 86 v~~Ag~ 91 (260)
T 1nff_A 86 VNNAGI 91 (260)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0012 Score=57.76 Aligned_cols=75 Identities=24% Similarity=0.349 Sum_probs=55.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +.... .|-.+.+.+.++ .++
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 99 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5788999998 99999999999999999999999887765554444 54322 355555444332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 100 iD~lvnnAg~ 109 (267)
T 1vl8_A 100 LDTVVNAAGI 109 (267)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999985
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00081 Score=57.48 Aligned_cols=97 Identities=18% Similarity=0.251 Sum_probs=67.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC-cEEe-cCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFL-VSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~-~~v~-~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.+.+|||+|+ |.+|...+..+...|.+|++++++.++..++ +..+. ..+. |.. +.+.+..+++|+||.++|...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~-~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~ 96 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL-RERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP 96 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH-HhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC
Confidence 5789999998 9999999999999999999999998877665 34455 4332 222 334445568999999998642
Q ss_pred -------------cHHHHHHhhc--cCCEEEEecCCCC
Q 018094 260 -------------PLMPLIGLLK--SQGKLVLVGAPEK 282 (361)
Q Consensus 260 -------------~~~~~~~~l~--~~G~~v~~g~~~~ 282 (361)
.....++.++ ..++++.++....
T Consensus 97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 134 (236)
T 3e8x_A 97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT 134 (236)
T ss_dssp TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 1122333333 2378999877543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00064 Score=58.70 Aligned_cols=76 Identities=14% Similarity=0.225 Sum_probs=58.7
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHhc---CCccEEEEc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAAM---GTMDGIIDT 254 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~~---~g~d~vid~ 254 (361)
.++++|||.|+ |.+|...++.+...|++|++++++.++..++.+++..... .|..+.+.+.++. +++|++|.+
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 91 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN 91 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 57899999997 9999999999999999999999998887777777664332 3444555444432 479999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 92 Ag~ 94 (249)
T 3f9i_A 92 AGI 94 (249)
T ss_dssp CC-
T ss_pred CCC
Confidence 985
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00065 Score=59.83 Aligned_cols=76 Identities=16% Similarity=0.199 Sum_probs=58.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++ .+++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4678999997 9999999999999999999999999888887777764322 345555444332 2479999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
|.++|..
T Consensus 84 v~~Ag~~ 90 (281)
T 3m1a_A 84 VNNAGRT 90 (281)
T ss_dssp EECCCCE
T ss_pred EECCCcC
Confidence 9999853
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0012 Score=57.67 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=55.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4788999997 99999999999999999999999887665554433 4322 1355555444332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 92 ~id~lv~nAg~ 102 (267)
T 1iy8_A 92 RIDGFFNNAGI 102 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999984
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00032 Score=61.77 Aligned_cols=100 Identities=23% Similarity=0.236 Sum_probs=66.7
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHH---c-C--Cc-EEecCCCHHHHHHhcCCc
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---L-G--AD-SFLVSRDQDEMQAAMGTM 248 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~---~-g--~~-~v~~~~~~~~~~~~~~g~ 248 (361)
...++++++||-+|+| .|..+..+++.. +.+|+.++.+++....+.+. . | .. ..+...+........+.+
T Consensus 94 ~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~ 172 (280)
T 1i9g_A 94 EGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSV 172 (280)
T ss_dssp HTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCE
T ss_pred HcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCce
Confidence 3457899999999988 788888898875 46999999887765443222 2 4 22 112222221110012369
Q ss_pred cEEEEcCCCc-ccHHHHHHhhccCCEEEEec
Q 018094 249 DGIIDTVSAV-HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 249 d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 278 (361)
|+|+...... ..+..+.+.|+++|+++.+.
T Consensus 173 D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 173 DRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp EEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 9999876655 55788899999999998874
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00076 Score=57.04 Aligned_cols=96 Identities=7% Similarity=0.076 Sum_probs=68.0
Q ss_pred CEEEEEcc-chHHHHHHHHHH-HCCCeEEEEeCCch-hHHHHHHHcCC--cE-EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAK-AMGVKVTVISTSPS-KKSEAIERLGA--DS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~-~~g~~Vi~~~~~~~-~~~~~~~~~g~--~~-v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
++|||+|+ |.+|...++.+. ..|++|++++++.+ +..++. ..+. .. ..|..+.+.+.++..++|++|.++|..
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 46999997 999999999888 89999999999877 554442 1232 21 235566777777778999999999873
Q ss_pred cc-HHHHHHhhccC--CEEEEecCCC
Q 018094 259 HP-LMPLIGLLKSQ--GKLVLVGAPE 281 (361)
Q Consensus 259 ~~-~~~~~~~l~~~--G~~v~~g~~~ 281 (361)
.. ....++.++.. ++++.++...
T Consensus 85 n~~~~~~~~~~~~~~~~~iv~iSs~~ 110 (221)
T 3r6d_A 85 GSDMASIVKALSRXNIRRVIGVSMAG 110 (221)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred ChhHHHHHHHHHhcCCCeEEEEeece
Confidence 21 34445555433 5899887543
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00025 Score=55.40 Aligned_cols=75 Identities=19% Similarity=0.321 Sum_probs=54.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~ 258 (361)
++++|+|+|+|.+|...++.++..|.+|++++++.++...+ ++.+...+. +..+.+.+.+. ..++|+++.+++..
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTT-TTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred cCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 35679999999999999999999999999998877655433 344543332 33444545444 35799999999975
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00069 Score=59.26 Aligned_cols=76 Identities=16% Similarity=0.291 Sum_probs=56.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999999999999999999988766665544 4332 2355555443332 2479
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++++++|..
T Consensus 83 D~lVnnAG~~ 92 (264)
T 3tfo_A 83 DVLVNNAGVM 92 (264)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999853
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0011 Score=56.77 Aligned_cols=74 Identities=16% Similarity=0.166 Sum_probs=56.3
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~vi 252 (361)
++++||.|+ |++|.+.+..+...|++|++++++.++..++.++++... ..|-.+.+.+.++ .+++|++|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 578999997 999999999999999999999999888777766664322 2344555443332 24799999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|.
T Consensus 83 nnAg~ 87 (235)
T 3l6e_A 83 HCAGT 87 (235)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 99986
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00082 Score=59.12 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=53.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCC-cE----EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA-DS----FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~-~~----v~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.++ .+. .. ..|-.+.+.+.++ .+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4678999997 9999999999999999999999987765554433 232 11 1344555444332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 111 ~iD~vi~~Ag~ 121 (279)
T 1xg5_A 111 GVDICINNAGL 121 (279)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999984
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0015 Score=57.25 Aligned_cols=98 Identities=18% Similarity=0.341 Sum_probs=66.8
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
-.++++||.|+ |++|.+.++.+...|++|+++.+.. ++..++.+ +.|.... .|-.+.+.+.++ .+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 36789999997 9999999999999999999986654 33333333 3354322 344555443332 24
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecC
Q 018094 247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 279 (361)
++|++|+++|... ..+.++..++++|+++.++.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 7999999998521 12334556677899999975
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0013 Score=57.37 Aligned_cols=75 Identities=17% Similarity=0.211 Sum_probs=56.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cE-EecCCCHHHHHHhc-------CCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAAM-------GTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~-v~~~~~~~~~~~~~-------~g~d~v 251 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++.. .. ..|..+.+.+.++. +++|++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4788999998 9999999999999999999999988776666555532 21 23555555444332 479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 91 v~~Ag~ 96 (263)
T 3ak4_A 91 CANAGV 96 (263)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999984
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0019 Score=59.29 Aligned_cols=117 Identities=12% Similarity=0.055 Sum_probs=81.0
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
-+|+|+|+|.+|..+++.+.. ..+|.+++.+.++...+ +++.....+|..+.+.+.++..+.|+|+++++.......+
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v~ 94 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSI 94 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchHH
Confidence 469999999999998887754 46888888887665544 3333233456777788888888999999999876556667
Q ss_pred HHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEeccc
Q 018094 265 IGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI 303 (361)
Q Consensus 265 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~ 303 (361)
..|++.+-.|+++........--....-.+++.+.....
T Consensus 95 ~~~~~~g~~yvD~s~~~~~~~~l~~~a~~~g~~~i~~~G 133 (365)
T 3abi_A 95 KAAIKSKVDMVDVSFMPENPLELRDEAEKAQVTIVFDAG 133 (365)
T ss_dssp HHHHHHTCEEEECCCCSSCGGGGHHHHHHTTCEEECCCB
T ss_pred HHHHhcCcceEeeeccchhhhhhhhhhccCCceeeecCC
Confidence 778899999999864333221111223456677665443
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00081 Score=58.64 Aligned_cols=75 Identities=11% Similarity=0.107 Sum_probs=56.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..++.+...+ .|-.+.+.+.++ .+++|++|+
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 105 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH 105 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999997 9999999999999999999999998776555566675432 355555443332 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 106 nAg~ 109 (260)
T 3gem_A 106 NASE 109 (260)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9985
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00039 Score=61.10 Aligned_cols=105 Identities=17% Similarity=0.150 Sum_probs=68.5
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEE
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vi 252 (361)
.+|+....--++++++|+|+|.+|.++++.+...|++|+++.++.++..+++++++...-++..+.+.+.+ +++|+++
T Consensus 108 ~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~--~~~DivV 185 (271)
T 1nyt_A 108 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG--HEFDLII 185 (271)
T ss_dssp HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT--CCCSEEE
T ss_pred HHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc--CCCCEEE
Confidence 34444332236789999999999999999999999999999999888778877776410011111111111 5799999
Q ss_pred EcCCCcccHH---HHHHhhccCCEEEEecC
Q 018094 253 DTVSAVHPLM---PLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 253 d~~g~~~~~~---~~~~~l~~~G~~v~~g~ 279 (361)
++++....-. .....++++..++++..
T Consensus 186 n~t~~~~~~~~~~i~~~~l~~~~~v~D~~y 215 (271)
T 1nyt_A 186 NATSSGISGDIPAIPSSLIHPGIYCYDMFY 215 (271)
T ss_dssp ECCSCGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred ECCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 9999754200 01233556666666654
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0013 Score=57.05 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=56.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++ .+++|++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999997 9999999999999999999999988877777666664322 244454443332 2478999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 85 v~~Ag~ 90 (253)
T 1hxh_A 85 VNNAGI 90 (253)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0011 Score=59.22 Aligned_cols=76 Identities=21% Similarity=0.282 Sum_probs=57.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
-.++++||.|+ |++|...+..+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 36789999998 99999999999999999999999988776665544 3322 2355555444332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 109 id~lvnnAg~ 118 (301)
T 3tjr_A 109 VDVVFSNAGI 118 (301)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999985
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.0013 Score=56.95 Aligned_cols=74 Identities=19% Similarity=0.270 Sum_probs=54.0
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCcc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~d 249 (361)
++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999997 99999999999999999999999887665554443 4322 2355555444332 24799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 82 ~lv~nAg~ 89 (256)
T 1geg_A 82 VIVNNAGV 89 (256)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.001 Score=58.95 Aligned_cols=97 Identities=11% Similarity=0.030 Sum_probs=67.3
Q ss_pred CCCCEEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCc-EEecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GAD-SFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
-+++++||+| +|++|.+++..+...|++|+++.++.++..++.+++ +.. ...|..+.+.+.+....+|++|+++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 4678999999 599999999999999999999999887766665554 322 2345666666767667899999999
Q ss_pred CCcc--cHHHHHHhhccCCEEEEec
Q 018094 256 SAVH--PLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 256 g~~~--~~~~~~~~l~~~G~~v~~g 278 (361)
|... .....+..+...-.+..+-
T Consensus 197 g~g~~~~~~~~~~~~~~~~~~~dvn 221 (287)
T 1lu9_A 197 AIGLELLPQAAWQNESSIEIVADYN 221 (287)
T ss_dssp CTTCCSBCHHHHTTCTTCCEEEECC
T ss_pred CccccCCChhHcCchHHHHHHHHhh
Confidence 7421 1111233335555555553
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00067 Score=61.51 Aligned_cols=99 Identities=19% Similarity=0.183 Sum_probs=62.1
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---HcC------------Cc-EEecCCCHHHH
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLG------------AD-SFLVSRDQDEM 241 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~---~~g------------~~-~v~~~~~~~~~ 241 (361)
.++++++||-+|+|. |..++.+++..| .+|+.++.+++....+.+ +++ .. .++..+-.+..
T Consensus 102 ~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp TCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred CCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 478999999999876 778888888765 689999988765433322 221 11 11211111111
Q ss_pred HHhc-CCccEEEEcCCCcc-cHHHHHHhhccCCEEEEecC
Q 018094 242 QAAM-GTMDGIIDTVSAVH-PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 242 ~~~~-~g~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g~ 279 (361)
..+. +.+|+|+-...... .+..+.+.|+++|+++.+..
T Consensus 181 ~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 181 EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp -------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred cccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 1122 36999987655543 37788999999999997643
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0016 Score=57.69 Aligned_cols=98 Identities=13% Similarity=0.218 Sum_probs=67.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHH----HHHcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA----IERLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~----~~~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+. .++.+.... .|-.+.+.+.++ .++
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999997 9999999999999999999999887643222 233454332 244555443332 247
Q ss_pred ccEEEEcCCCcc--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 248 MDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 248 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+|++|+++|... ..+.++..++++|+++.++..
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~ 184 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI 184 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence 999999987531 122344556778999999763
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00072 Score=58.87 Aligned_cols=75 Identities=19% Similarity=0.211 Sum_probs=54.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHHhcC------C
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAAMG------T 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~~------g 247 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++.. +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4678999998 99999999999999999999999887665554443 3121 235555554443321 4
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 86 id~lv~~Ag~ 95 (260)
T 2z1n_A 86 ADILVYSTGG 95 (260)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0011 Score=58.35 Aligned_cols=75 Identities=16% Similarity=0.284 Sum_probs=54.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---C---CcE---EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G---ADS---FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g---~~~---v~~~~~~~~~~~~-------~ 245 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ . ... ..|-.+.+.+.++ .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 4678999997 99999999999999999999999987766665555 2 111 2355555444333 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++|+++|.
T Consensus 85 g~id~lv~~Ag~ 96 (278)
T 1spx_A 85 GKLDILVNNAGA 96 (278)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 479999999985
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0013 Score=57.15 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=56.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC---CcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g---~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++. ... ..|-.+.+.+.++ .+++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999997 999999999999999999999999887776665543 222 2355555443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 85 d~lv~nAg~ 93 (257)
T 3imf_A 85 DILINNAAG 93 (257)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0017 Score=56.22 Aligned_cols=76 Identities=17% Similarity=0.248 Sum_probs=55.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----C--CcE-EecC--CCHHHHHHh-------
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G--ADS-FLVS--RDQDEMQAA------- 244 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g--~~~-v~~~--~~~~~~~~~------- 244 (361)
-.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ + ... ..|. .+.+.+.++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 36789999997 99999999999999999999999988766654443 2 211 2343 444433322
Q ss_pred cCCccEEEEcCCC
Q 018094 245 MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 90 ~g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 YPRLDGVLHNAGL 102 (252)
T ss_dssp CSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2479999999985
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0008 Score=58.00 Aligned_cols=76 Identities=17% Similarity=0.245 Sum_probs=55.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHHcCCcEE---ecCCCHHHHHHhc--CCccEEEEcC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAIERLGADSF---LVSRDQDEMQAAM--GTMDGIIDTV 255 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~~~~g~~~v---~~~~~~~~~~~~~--~g~d~vid~~ 255 (361)
.|+++||.|+ +++|.+.++.+...|++|++++++.+ +..+.+++.|.+.. .|..+++.+++.. +++|+.++++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence 6899999987 99999999999999999999998753 33344566776432 3444444433332 3799999999
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
|..
T Consensus 88 Gi~ 90 (247)
T 4hp8_A 88 GII 90 (247)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0017 Score=50.35 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=56.2
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 259 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~~ 259 (361)
+.+|+|+|+|.+|...++.+...|.+|++++++.++...+.++++...+. +..+.+.+.+. ..++|+||.+++...
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 35799999999999999999999999999999887766665556664332 33344444433 357999999998764
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00095 Score=52.15 Aligned_cols=75 Identities=21% Similarity=0.147 Sum_probs=58.0
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH 259 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~g~d~vid~~g~~~ 259 (361)
.++++|+|+|.+|...++.+...|.+|+++++++++..++ ++.+...+. |..+++.+.+.. .++|++|.+.+...
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~-~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL-EDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDE 82 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-HHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHH
Confidence 4679999999999999999999999999999998876665 455664332 445556665553 47999999999654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0015 Score=56.81 Aligned_cols=76 Identities=13% Similarity=0.231 Sum_probs=55.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ |... ..|-.+.+.+.++ .+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999997 99999999999999999999999887665554443 4322 1355555443322 2479
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|+++|..
T Consensus 86 d~lv~nAg~~ 95 (262)
T 1zem_A 86 DFLFNNAGYQ 95 (262)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999853
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0012 Score=57.54 Aligned_cols=75 Identities=16% Similarity=0.230 Sum_probs=54.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHc----CCcEE---ecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERL----GADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~----g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++ ..++.+++ +.... .|-.+.+.+.++ .+
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678999997 999999999999999999999988776 55444433 44322 244555443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 83 ~iD~lv~~Ag~ 93 (260)
T 1x1t_A 83 RIDILVNNAGI 93 (260)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0013 Score=56.72 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|+++++ +.++..++.++ .+... ..|-.+.+.+.++ .++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 99999999999999999999998 65555444333 34332 2355555444332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 83 id~lv~nAg~ 92 (246)
T 2uvd_A 83 VDILVNNAGV 92 (246)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0018 Score=56.63 Aligned_cols=75 Identities=19% Similarity=0.283 Sum_probs=56.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE--EecCCCHHHHHHh-------cCCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~g~d~vi 252 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++.... ..|-.+.+.+.++ .+++|++|
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5788999997 999999999999999999999998877666655554212 2344555444332 24799999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|.
T Consensus 88 ~nAg~ 92 (270)
T 1yde_A 88 NNAGH 92 (270)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99985
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0017 Score=56.61 Aligned_cols=98 Identities=14% Similarity=0.198 Sum_probs=66.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-----CcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-----~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..+..+++. ... ..|-.+.+.+.++ .+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 999999999999999999999998776555444432 111 1344555444332 24
Q ss_pred CccEEEEcCCCcc-----------------cHHHHHHhhcc-----CCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~ 280 (361)
++|++|+++|... ..+.++..++. .|+++.++..
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~ 141 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 141 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence 7899999998531 11233444533 5899998763
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0016 Score=57.47 Aligned_cols=75 Identities=19% Similarity=0.287 Sum_probs=56.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC---CcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g---~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
+++++||.|+ |++|.+.++.+...|++|++++++.++..++.+++. ... ..|-.+.+.+.++ .+++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5788999997 999999999999999999999999887777666553 222 2345555443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++++++|.
T Consensus 107 D~lVnnAg~ 115 (283)
T 3v8b_A 107 DIVVANAGI 115 (283)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00099 Score=58.42 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=55.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCc---EEecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GAD---SFLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |++|.+.+..+...|++|++++++.++..++.+++ +.. ...|-.+.+.+.++ .+++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL 106 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999997 99999999999999999999999887665554433 432 12355555443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 107 D~lvnnAg~ 115 (270)
T 3ftp_A 107 NVLVNNAGI 115 (270)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0019 Score=56.56 Aligned_cols=75 Identities=16% Similarity=0.286 Sum_probs=55.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cE---EecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~---v~~~~~~~~~~~~-------~~g~d 249 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.++++. .. ..|-.+.+.+.++ .+++|
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5688999998 9999999999999999999999987766666555543 11 1344555444433 24799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 95 ~li~~Ag~ 102 (278)
T 2bgk_A 95 IMFGNVGV 102 (278)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999885
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0014 Score=58.37 Aligned_cols=77 Identities=22% Similarity=0.306 Sum_probs=54.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC-cE---EecCCCH-HHHHH-------hc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA-DS---FLVSRDQ-DEMQA-------AM 245 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~-~~---v~~~~~~-~~~~~-------~~ 245 (361)
..++++||.|+ |++|.+.++.+...|++|++++++.++..+..+++ +. .. ..|-.+. +.+.+ ..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 35788999998 99999999999999999999999988766655554 21 11 2344443 33322 23
Q ss_pred CCccEEEEcCCCc
Q 018094 246 GTMDGIIDTVSAV 258 (361)
Q Consensus 246 ~g~d~vid~~g~~ 258 (361)
+++|++|+++|..
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 5899999999953
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00078 Score=58.81 Aligned_cols=75 Identities=19% Similarity=0.212 Sum_probs=54.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHc---CCc--E-EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERL---GAD--S-FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~-~g~~Vi~~~~~~~~~~~~~~~~---g~~--~-v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...+..+.. .|++|++++++.++..++.+++ +.. . ..|-.+.+.+.++ .++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999997 9999999998888 9999999999877655554443 322 1 2344555444332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 83 id~li~~Ag~ 92 (276)
T 1wma_A 83 LDVLVNNAGI 92 (276)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999885
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0016 Score=57.17 Aligned_cols=76 Identities=20% Similarity=0.264 Sum_probs=56.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcEE---ecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
-.++++||.|+ |++|.+.++.+...|++|++++++.++..+..+++ +.... .|-.+.+.+.++ .+
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999997 99999999999999999999999987665554443 43322 355555443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 105 ~id~lv~nAg~ 115 (277)
T 4fc7_A 105 RIDILINCAAG 115 (277)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcC
Confidence 79999999984
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0016 Score=57.87 Aligned_cols=95 Identities=14% Similarity=0.092 Sum_probs=69.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
-.+++++|+|+|.+|.+++..+...|+ +|+++.++.++.++++++++.. .+++ .+.+.+...++|+||++++..
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~---~~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS---LAEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC---HHHHHHTGGGCSEEEECSCTT
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee---HHHHHhhhccCCEEEECCCCC
Confidence 367899999999999999999999998 9999999988888888888752 2222 233444556899999999875
Q ss_pred ccH-----HHHHHhhccCCEEEEecC
Q 018094 259 HPL-----MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 ~~~-----~~~~~~l~~~G~~v~~g~ 279 (361)
... ......++++..++++.-
T Consensus 216 ~~~~~~~~~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 216 MHPRVEVQPLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp CSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 410 011235667777777754
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00082 Score=58.93 Aligned_cols=76 Identities=14% Similarity=0.252 Sum_probs=59.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..++++... ..|-.+.+.+.++ .+++|++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999997 999999999999999999999999988877777776532 2355555444433 2479999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
++++|..
T Consensus 90 v~nAg~~ 96 (271)
T 3tzq_B 90 DNNAAHS 96 (271)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9999864
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00074 Score=58.60 Aligned_cols=75 Identities=24% Similarity=0.392 Sum_probs=57.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++ .+++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 999999999999999999999999887777666665332 2355555444333 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 84 v~nAg~ 89 (254)
T 1hdc_A 84 VNNAGI 89 (254)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00049 Score=59.64 Aligned_cols=100 Identities=20% Similarity=0.172 Sum_probs=68.1
Q ss_pred HhhCCCCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHH---HcCCcE--EecCCCHHHHHHhc-CC
Q 018094 176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIE---RLGADS--FLVSRDQDEMQAAM-GT 247 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~~-~g 247 (361)
.....++++++||-+|+|. |..+..+++.. +.+|+.++.+++....+.+ +.|... .+...+... ... +.
T Consensus 86 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~ 162 (255)
T 3mb5_A 86 VAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE--GIEEEN 162 (255)
T ss_dssp HHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG--CCCCCS
T ss_pred HHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh--ccCCCC
Confidence 3345578999999999876 88888888884 5699999988765443322 335422 222222211 122 35
Q ss_pred ccEEEEcCCCcc-cHHHHHHhhccCCEEEEec
Q 018094 248 MDGIIDTVSAVH-PLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 248 ~d~vid~~g~~~-~~~~~~~~l~~~G~~v~~g 278 (361)
+|+|+....... .+..+.+.|+++|+++.+.
T Consensus 163 ~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 163 VDHVILDLPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp EEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred cCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 999998776653 5888999999999998873
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00012 Score=65.41 Aligned_cols=118 Identities=15% Similarity=0.141 Sum_probs=80.0
Q ss_pred cccchhhhhhhHHHHhh---------CCCCCCCEEEEEccc-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-
Q 018094 162 APLLCAGITVYSPLRFY---------GLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD- 230 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~---------~~~~~g~~VlI~Gag-~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~- 230 (361)
..+||+..++...++.. +.--.|.+++|+|+| .+|..+++++...|++|+++.++..+..+..++++..
T Consensus 146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~ 225 (320)
T 1edz_A 146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK 225 (320)
T ss_dssp CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence 46678888888777773 322478999999997 5799999999999999999887754432222333321
Q ss_pred EEe-cC--CCHHHHHHhcCCccEEEEcCCCccc-HHHHHHhhccCCEEEEecCCC
Q 018094 231 SFL-VS--RDQDEMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 231 ~v~-~~--~~~~~~~~~~~g~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.. .. .+++.+.+....+|+||.++|.+.. +.. +.++++..++++|...
T Consensus 226 ~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~~--e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 226 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFPT--EYIKEGAVCINFACTK 278 (320)
T ss_dssp CEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBCT--TTSCTTEEEEECSSSC
T ss_pred ccccccccccHhHHHHHhccCCEEEECCCCCcceeCH--HHcCCCeEEEEcCCCc
Confidence 100 00 1124555666679999999998763 332 3478888888898754
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0027 Score=55.58 Aligned_cols=75 Identities=13% Similarity=0.274 Sum_probs=54.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 5688999998 99999999999999999999999887665554433 4322 1344554443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 110 D~li~~Ag~ 118 (272)
T 1yb1_A 110 SILVNNAGV 118 (272)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCc
Confidence 999999985
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00094 Score=59.67 Aligned_cols=86 Identities=16% Similarity=0.222 Sum_probs=58.9
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHHcC----Cc-EEecCCCHHHHHH
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS---PSKKSEAIERLG----AD-SFLVSRDQDEMQA 243 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~---~~~~~~~~~~~g----~~-~v~~~~~~~~~~~ 243 (361)
.+|.....--.++++||+|+|++|.+++..+...|+ +|+++.++ .++.++++++++ .. ..++..+.++..+
T Consensus 137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~ 216 (312)
T 3t4e_A 137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTE 216 (312)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHh
Confidence 445443322368899999999999999999999999 89999999 666666666553 22 2334444322233
Q ss_pred hcCCccEEEEcCCCc
Q 018094 244 AMGTMDGIIDTVSAV 258 (361)
Q Consensus 244 ~~~g~d~vid~~g~~ 258 (361)
....+|+||++++..
T Consensus 217 ~l~~~DiIINaTp~G 231 (312)
T 3t4e_A 217 ALASADILTNGTKVG 231 (312)
T ss_dssp HHHHCSEEEECSSTT
T ss_pred hccCceEEEECCcCC
Confidence 334689999998754
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0012 Score=57.43 Aligned_cols=75 Identities=17% Similarity=0.310 Sum_probs=57.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHhc-------CCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAAM-------GTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~~-------~g~d~v 251 (361)
.++++||+|+ |.+|...++.+...|++|++++++.++..++.++++.... .|..+.+.+.++. +++|++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 5688999998 9999999999999999999999998877777677765322 3445554444332 479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 91 i~~Ag~ 96 (265)
T 2o23_A 91 VNCAGI 96 (265)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999885
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00075 Score=59.03 Aligned_cols=75 Identities=19% Similarity=0.203 Sum_probs=55.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHHh---cCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA---MGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~---~~g~d~ 250 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..+++ +... ..|..+.+.+.++ .+++|+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 5788999997 99999999999999999999999987765554443 2211 1244555544443 347999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+++++|.
T Consensus 89 lv~nAg~ 95 (267)
T 3t4x_A 89 LINNLGI 95 (267)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999985
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.002 Score=56.62 Aligned_cols=75 Identities=17% Similarity=0.214 Sum_probs=54.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcEE---ecCCCHHHHHHh------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~------~~g~d 249 (361)
.++++||.|+ +++|.+.++.+...|++|++++++.++..++.+++ +.... .|-.+.+.+.++ .+++|
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD 111 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD 111 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999997 99999999999999999999999887766655443 43321 233343322221 15799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++++++|.
T Consensus 112 ~lvnnAg~ 119 (275)
T 4imr_A 112 ILVINASA 119 (275)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999985
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00074 Score=59.06 Aligned_cols=76 Identities=18% Similarity=0.293 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCcEE---ecCCCHHHHHH-------hcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF---LVSRDQDEMQA-------AMGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~~v---~~~~~~~~~~~-------~~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++ .+.... .|-.+.+.+.+ ..++
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 98 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG 98 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5788999997 9999999999999999999999988776555444 344321 34444433322 2358
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++|+++|..
T Consensus 99 id~lv~nAg~~ 109 (266)
T 4egf_A 99 LDVLVNNAGIS 109 (266)
T ss_dssp CSEEEEECCCC
T ss_pred CCEEEECCCcC
Confidence 99999999853
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.003 Score=56.02 Aligned_cols=98 Identities=17% Similarity=0.168 Sum_probs=65.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch--hHH---HHHHHcCCcEEe---cCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKS---EAIERLGADSFL---VSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~--~~~---~~~~~~g~~~v~---~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |.+|.+.+..+...|++|+++.++.+ ... +..++.|....+ |-.+.+.+.++ .+
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 127 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG 127 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999997 99999999999999999999887632 222 223345543322 44444433322 25
Q ss_pred CccEEEEcCCCcc--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++|++++++|... ..+.++..++++|+++.++..
T Consensus 128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 8999999998521 112344456778999999764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0016 Score=56.69 Aligned_cols=98 Identities=13% Similarity=0.214 Sum_probs=64.6
Q ss_pred CCCEEEEEcc-ch--HHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcCC-c-E--EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGA-D-S--FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~--vG~~a~~la~~~g~~Vi~~~~~~~~~---~~~~~~~g~-~-~--v~~~~~~~~~~~~-------~ 245 (361)
.++++||.|+ |. +|...++.+...|++|+++.++.+.. .++.++++. . . ..|-.+.+.+.++ .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5789999997 66 99999999999999999998876432 233333443 1 1 2344444433322 2
Q ss_pred CCccEEEEcCCCcc-----------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 246 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 246 ~g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+++|+++.++|... ..+.++..++++|+++.++..
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 47999999988532 112344456678999999764
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0022 Score=55.54 Aligned_cols=73 Identities=23% Similarity=0.360 Sum_probs=54.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE--ecCCCHHHHHHh-------cCCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~g~d~vi 252 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++ .++.++++. .. .|-.+.+.+.++ .+++|++|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999998 999999999999999999999998777 566555542 22 344554433332 24799999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|.
T Consensus 83 ~~Ag~ 87 (256)
T 2d1y_A 83 NNAAI 87 (256)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99985
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0011 Score=57.58 Aligned_cols=75 Identities=17% Similarity=0.301 Sum_probs=58.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++ .+++|++
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 87 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL 87 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5688999998 9999999999999999999999999888888777775432 344554433332 2479999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|.++|.
T Consensus 88 i~~Ag~ 93 (261)
T 3n74_A 88 VNNAGI 93 (261)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999885
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0018 Score=55.93 Aligned_cols=75 Identities=16% Similarity=0.293 Sum_probs=54.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHhc-------CCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|..+.+.+.++. +++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4688999997 99999999999999999999999877655444433 4322 13445554444332 489
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 90 d~vi~~Ag~ 98 (255)
T 1fmc_A 90 DILVNNAGG 98 (255)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999885
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0016 Score=56.47 Aligned_cols=95 Identities=13% Similarity=0.080 Sum_probs=72.4
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..++...++... -.|.+++|+|. +.+|..+++++...|++|++..+......
T Consensus 130 ~~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~------------------- 188 (276)
T 3ngx_A 130 FLVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG------------------- 188 (276)
T ss_dssp SSCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------
T ss_pred CCCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------
Confidence 356788888888888876 68999999998 46999999999999999998865432222
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+....+|++|.++|.+..+.. ..++++..++++|...
T Consensus 189 --~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 189 --SMTRSSKIVVVAVGRPGFLNR--EMVTPGSVVIDVGINY 225 (276)
T ss_dssp --HHHHHSSEEEECSSCTTCBCG--GGCCTTCEEEECCCEE
T ss_pred --HhhccCCEEEECCCCCccccH--hhccCCcEEEEeccCc
Confidence 222347999999998764432 4579999999998653
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0015 Score=56.96 Aligned_cols=75 Identities=16% Similarity=0.191 Sum_probs=55.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCc-EE---ecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGAD-SF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~-~v---~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ +++|.+.++.+...|++|++++++.++..++.++ .+.. .. .|-.+.+.+.++ .+
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 5789999997 9999999999999999999999998776555444 3322 21 355555443332 25
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++++++|.
T Consensus 87 ~id~lvnnAg~ 97 (265)
T 3lf2_A 87 CASILVNNAGQ 97 (265)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999985
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0023 Score=54.47 Aligned_cols=75 Identities=16% Similarity=0.266 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcE-EecCCCHHHHHHh-------cCCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~-------~~g~d~vi 252 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.++++ ... ..|..+.+.+.++ .+++|++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3568999997 999999999999999999999998877666655554 222 2344555443332 24799999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|.
T Consensus 84 ~~Ag~ 88 (234)
T 2ehd_A 84 NNAGV 88 (234)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99985
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0029 Score=55.74 Aligned_cols=98 Identities=21% Similarity=0.267 Sum_probs=66.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhH-HHH---HHHcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEA---IERLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~-~~~---~~~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++. .++ +++.+.+.. .|..+.+.+.++ .++
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5688999997 9999999999999999999999886542 222 233454322 344454433322 247
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+|++|+++|... ..+.++..++.+|+++.++..
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 165 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence 999999998532 113344555667999999763
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0013 Score=57.20 Aligned_cols=97 Identities=15% Similarity=0.256 Sum_probs=64.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |++|.+.++.+...|++|+++.+ +.++..+..++ .+... ..|-.+.+.+.++ .++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999997 99999999999999999999844 44443333333 34322 2345555443332 247
Q ss_pred ccEEEEcCCCcc--------------------------cHHHHHHhhccCCEEEEecC
Q 018094 248 MDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 248 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~ 279 (361)
+|++++++|... ..+.++..++++|+++.++.
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 999999997530 11223345566889999875
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0022 Score=56.87 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=66.9
Q ss_pred CCCCEEEEEcc-ch--HHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHcCCcEE--ecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGADSF--LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~--vG~~a~~la~~~g~~Vi~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~ 246 (361)
-.++++||.|+ |. +|.+.++.+...|++|+++.++++. ..++.++.+.... .|-.+.+.+.++ .+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46789999997 66 9999999999999999999988542 2333334443222 355555444332 24
Q ss_pred CccEEEEcCCCcc-----------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++|++|+++|... ..+.++..++++|+++.++..
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 7999999998642 122344556678999999764
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0016 Score=54.71 Aligned_cols=91 Identities=22% Similarity=0.318 Sum_probs=63.7
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc----
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH---- 259 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~---- 259 (361)
+|||+|+ |.+|...++.+...|.+|++++++.++..++. -+.+.+ .|..+.+. +...++|+||.++|...
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 5899998 99999999999999999999999987654431 233332 23233222 44568999999998742
Q ss_pred ----cHHHHHHhhccC--CEEEEecCC
Q 018094 260 ----PLMPLIGLLKSQ--GKLVLVGAP 280 (361)
Q Consensus 260 ----~~~~~~~~l~~~--G~~v~~g~~ 280 (361)
.....++.++.. ++++.++..
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 234566666554 688888653
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0021 Score=58.26 Aligned_cols=49 Identities=27% Similarity=0.388 Sum_probs=40.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS 231 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~ 231 (361)
-+|++|.|.|.|.+|+.+++.++.+|++|++.+.+.++ .++.+++|++.
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~-~~~a~~~ga~~ 221 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER-VAHAVALGHTA 221 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH-HHHHHHTTCEE
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHhcCCEE
Confidence 47899999999999999999999999999977766554 55667777654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0018 Score=57.13 Aligned_cols=97 Identities=18% Similarity=0.242 Sum_probs=65.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HHcCCcE---EecCCCHHHHHH
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADS---FLVSRDQDEMQA 243 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~------------~~~~~~~~---~~~g~~~---v~~~~~~~~~~~ 243 (361)
.++++||.|+ |.+|...++.+...|++|++++++ .++..+.. ++.+... ..|-.+.+.+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 5789999997 999999999999999999999876 33332222 2334332 235555544433
Q ss_pred h-------cCCccEEEEcCCCcc-----------------------cHHHHHHhhccCCEEEEecC
Q 018094 244 A-------MGTMDGIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 244 ~-------~~g~d~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~ 279 (361)
+ .+++|++|+++|... ..+.++..++.+|+++.++.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 2 247999999998631 11224445567899999975
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0035 Score=57.07 Aligned_cols=75 Identities=25% Similarity=0.443 Sum_probs=54.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-------H---HHHHHHcCCcE---EecCCCHHHHHHh----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------K---SEAIERLGADS---FLVSRDQDEMQAA---- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-------~---~~~~~~~g~~~---v~~~~~~~~~~~~---- 244 (361)
.|+++||.|+ +++|.+.+..+...|++|++++++.++ . .+..++.|... ..|-.+++.+.++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~ 123 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA 123 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 5789999998 999999999999999999999988763 1 22223445432 2355565544333
Q ss_pred ---cCCccEEEEcCCC
Q 018094 245 ---MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ---~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 124 ~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 124 IKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 2489999999985
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=57.52 Aligned_cols=75 Identities=21% Similarity=0.218 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHH---cCCcE---EecCCCHHHHHHhc-------CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADS---FLVSRDQDEMQAAM-------GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~~-------~g 247 (361)
.++++||.|+ |.+|...+..+...|++|+++++ +.++..++.++ .+... ..|..+.+.+.++. ++
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 99999999999999999999998 55544443333 35432 23445554444332 47
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 100 ~d~vi~~Ag~ 109 (274)
T 1ja9_A 100 LDFVMSNSGM 109 (274)
T ss_dssp EEEEECCCCC
T ss_pred CCEEEECCCC
Confidence 9999999885
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0033 Score=54.67 Aligned_cols=75 Identities=17% Similarity=0.287 Sum_probs=55.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 107 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC 107 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999997 99999999999999999999999988766654443 4322 2345555443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 108 d~lv~~Ag~ 116 (262)
T 3rkr_A 108 DVLVNNAGV 116 (262)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999986
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0014 Score=58.94 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=55.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC--cE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--DS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~--~~---v~~~~~~~~~~~~-------~~ 246 (361)
.+++|||.|+ |.+|...++.+...|++|++++++.++..++.+++ +. .. ..|-.+.+.+.++ .+
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 5789999998 99999999999999999999999988766654443 22 11 2355555443332 25
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 87 ~id~lv~nAg~ 97 (319)
T 3ioy_A 87 PVSILCNNAGV 97 (319)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999984
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0027 Score=55.03 Aligned_cols=75 Identities=19% Similarity=0.229 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|+++++ +.++..++.++ .+... ..|..+.+.+.++ .++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 99999999999999999999998 65554444333 24322 1244554443332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 86 id~li~~Ag~ 95 (261)
T 1gee_A 86 LDVMINNAGL 95 (261)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999885
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0035 Score=54.48 Aligned_cols=98 Identities=14% Similarity=0.170 Sum_probs=67.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHH--HHHcCCcE---EecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEA--IERLGADS---FLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~--~~~~g~~~---v~~~~~~~~~~~~-------~~g~d 249 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.++.++...+ .++.+... ..|-.+++.+.++ .+++|
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD 85 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD 85 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 6889999997 9999999999999999999999887653221 23344322 2355555443322 25799
Q ss_pred EEEEcCCCcc------------------------cHHHHHHhh-ccCCEEEEecCC
Q 018094 250 GIIDTVSAVH------------------------PLMPLIGLL-KSQGKLVLVGAP 280 (361)
Q Consensus 250 ~vid~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~ 280 (361)
++++++|... ..+.++..| +.+|++|.+++.
T Consensus 86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~ 141 (258)
T 4gkb_A 86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK 141 (258)
T ss_dssp EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence 9999998632 123344455 457999999864
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0032 Score=55.47 Aligned_cols=76 Identities=16% Similarity=0.207 Sum_probs=54.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||+|+ |.+|...++.+...|++|+++.++.++..++.+++ +... ..|..+.+.+.++ .+++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 99999999999889999999887776655544443 4332 1345555544433 2479
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|.++|..
T Consensus 123 d~li~~Ag~~ 132 (285)
T 2c07_A 123 DILVNNAGIT 132 (285)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999853
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0023 Score=55.91 Aligned_cols=97 Identities=19% Similarity=0.107 Sum_probs=74.0
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+...+...++....--.|.+++|+|. +.+|..+++++...|++|++..+.....
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L-------------------- 198 (286)
T 4a5o_A 139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDL-------------------- 198 (286)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCH--------------------
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCH--------------------
Confidence 4567888888888887765458999999997 5699999999999999998876543222
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+....+|++|.++|.+..+. .+.++++..++++|...
T Consensus 199 -~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 199 -ADHVSRADLVVVAAGKPGLVK--GEWIKEGAIVIDVGINR 236 (286)
T ss_dssp -HHHHHTCSEEEECCCCTTCBC--GGGSCTTCEEEECCSCS
T ss_pred -HHHhccCCEEEECCCCCCCCC--HHHcCCCeEEEEecccc
Confidence 223345899999999876443 35679999999998753
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.002 Score=55.76 Aligned_cols=73 Identities=16% Similarity=0.269 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEE---ecCCCHHHHHHhc-------CCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~~-------~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|++++++.+ .+..++ .+.... .|-.+.+.+.++. +++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV 80 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999999999999999988765 222222 343322 2445554444332 479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 81 d~lv~~Ag~ 89 (255)
T 2q2v_A 81 DILVNNAGI 89 (255)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0017 Score=57.78 Aligned_cols=75 Identities=19% Similarity=0.334 Sum_probs=54.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC---cE---EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~---~~---v~~~~~~~~~~~~-------~ 245 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +. .. ..|-.+.+.+.++ .
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 4688999997 99999999999999999999999887665554433 32 21 1345555443332 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++|+++|.
T Consensus 105 g~iD~lvnnAG~ 116 (297)
T 1xhl_A 105 GKIDILVNNAGA 116 (297)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999984
|
| >1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=57.95 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=73.4
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEccc-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag-~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+.......+++...--.|.+|+|+|.| .+|.-+++++...|++|++..+... .
T Consensus 143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~ 201 (301)
T 1a4i_A 143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA---------------------H 201 (301)
T ss_dssp CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------S
T ss_pred CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc---------------------c
Confidence 46678877777777776644589999999997 6899999999999999988764422 1
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+....+|+||.++|.+..+. .+.++++..++++|..
T Consensus 202 L~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~ 239 (301)
T 1a4i_A 202 LDEEVNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN 239 (301)
T ss_dssp HHHHHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred HHHHhccCCEEEECCCCcccCC--HHHcCCCcEEEEccCC
Confidence 2334456899999999986433 3457899999999875
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00087 Score=58.22 Aligned_cols=76 Identities=21% Similarity=0.330 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..++++... ..|-.+.+.+.++ .+++|++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 85 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL 85 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999997 999999999999999999999999887766666665422 1344555443332 2489999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
|+++|..
T Consensus 86 v~nAg~~ 92 (257)
T 3tpc_A 86 VNCAGTA 92 (257)
T ss_dssp EECCCCC
T ss_pred EECCCCC
Confidence 9999853
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00091 Score=59.28 Aligned_cols=76 Identities=18% Similarity=0.199 Sum_probs=59.6
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHhc---CCccEEEEc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM---GTMDGIIDT 254 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~---~g~d~vid~ 254 (361)
-.|+++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++. +++|++|++
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n 93 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN 93 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 36789999997 999999999999999999999999888777766665432 23555666555543 478999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 94 Ag~ 96 (291)
T 3rd5_A 94 AGI 96 (291)
T ss_dssp CCC
T ss_pred CcC
Confidence 985
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0026 Score=56.45 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=53.9
Q ss_pred CCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGADSF--LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~~~---~~~~~~~g~~~v--~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ | ++|.+.++.+...|++|++++++.+.. .++.++.+.... .|-.+.+.+.++ .++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999997 5 999999999999999999999886432 233344453222 355555544433 257
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++|+++|..
T Consensus 109 iD~lVnnAG~~ 119 (296)
T 3k31_A 109 LDFVVHAVAFS 119 (296)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCcC
Confidence 99999999863
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.002 Score=55.44 Aligned_cols=75 Identities=17% Similarity=0.213 Sum_probs=54.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC----cE-EecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DS-FLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~----~~-v~~~~~~~~~~~~-------~~g~d 249 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..+..+++.. .. ..|..+.+.+.++ .+++|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999997 9999999999999999999999988776666555531 11 1344555444332 24699
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|.++|.
T Consensus 85 ~li~~Ag~ 92 (251)
T 1zk4_A 85 TLVNNAGI 92 (251)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999885
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0025 Score=53.30 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=66.7
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCc-E--EecCCCHHHHHHhcCCccEEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD-S--FLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~-~--v~~~~~~~~~~~~~~g~d~vi 252 (361)
..++++++||-+|+|. |..++.+++. +.+|+.++.+++....+ ++++|.. . ++..+-.+.+ .....+|+||
T Consensus 51 l~~~~~~~vLDlGcG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~-~~~~~~D~v~ 127 (204)
T 3njr_A 51 LAPRRGELLWDIGGGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL-ADLPLPEAVF 127 (204)
T ss_dssp HCCCTTCEEEEETCTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG-TTSCCCSEEE
T ss_pred cCCCCCCEEEEecCCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc-ccCCCCCEEE
Confidence 3468899999999875 8888888888 88999999988765433 2334543 2 2222222211 1124799999
Q ss_pred EcCCCcc-cHHHHHHhhccCCEEEEecC
Q 018094 253 DTVSAVH-PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 253 d~~g~~~-~~~~~~~~l~~~G~~v~~g~ 279 (361)
...+... .+..+.+.|+++|+++....
T Consensus 128 ~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 128 IGGGGSQALYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp ECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred ECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence 7755433 57788889999999987643
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0017 Score=56.54 Aligned_cols=75 Identities=16% Similarity=0.292 Sum_probs=55.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +.... .|-.+.+.+.++ .++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999997 99999999999999999999999887665554443 54321 355555444333 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 86 id~lv~~Ag~ 95 (263)
T 3ai3_A 86 ADILVNNAGT 95 (263)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0031 Score=55.13 Aligned_cols=100 Identities=22% Similarity=0.299 Sum_probs=68.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHH---HHcCCcEE---ecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAI---ERLGADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~---~~~g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
-.++++||.|+ +++|.+.++.+...|++|+++.+...+ ..++. ++.+.... .|-.+.+.+.++ .+
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999997 999999999999999999998765433 33332 33454322 344555443332 24
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCCC
Q 018094 247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
++|++++++|... ..+.++..++++|+++.++...
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 7999999998631 1234556677799999998644
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.001 Score=58.17 Aligned_cols=99 Identities=14% Similarity=0.225 Sum_probs=65.4
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
..++++||.|+ |++|.+.++.+...|++|+++.+. .++..++.+ ..+.... .|-.+.+.+.++ .+
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999997 999999999998899999988544 333333332 3344322 355555444333 24
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++|++|+++|... .++.++..++++|+++.++..
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~ 163 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS 163 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence 7999999998531 123355566778999999753
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0018 Score=56.62 Aligned_cols=97 Identities=19% Similarity=0.228 Sum_probs=73.7
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...||+..++...++....--.|.+++|+|. +.+|..+++++...|++|++..+....
T Consensus 139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~--------------------- 197 (285)
T 3l07_A 139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD--------------------- 197 (285)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS---------------------
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchh---------------------
Confidence 4567888888888887765458999999998 458999999999999999877543221
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+....+|+||.++|.+..+. .+.++++..++++|...
T Consensus 198 L~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 198 LKSHTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGINH 236 (285)
T ss_dssp HHHHHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCEE
T ss_pred HHHhcccCCEEEECCCCCCCCC--HHHcCCCcEEEEecccC
Confidence 2234456899999999876443 35679999999998643
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00046 Score=59.16 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=68.2
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
..+|||+|+ |.+|...++.+...| .+|++++++.++..++. .-+... ..|..+.+.+.++..++|++|.+++....
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 357999997 999999999999999 79999999876543221 112222 23556677777777899999999987541
Q ss_pred ---HHHHHHhhccC--CEEEEecCCC
Q 018094 261 ---LMPLIGLLKSQ--GKLVLVGAPE 281 (361)
Q Consensus 261 ---~~~~~~~l~~~--G~~v~~g~~~ 281 (361)
.+..++.++.. +++|.++...
T Consensus 102 ~~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 102 DIQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred hHHHHHHHHHHHHcCCCEEEEEecce
Confidence 23345555443 6899887643
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00087 Score=56.56 Aligned_cols=93 Identities=14% Similarity=0.166 Sum_probs=66.1
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCC-HHHHHHhcCCccEEEEcCCCcc---
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRD-QDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~-~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
+|||+|+ |.+|...++.+...|.+|++++++.++.... .+... ..|..+ .+.+.+...++|+||.++|...
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 5899997 9999999999999999999999987654221 12222 235556 6777777789999999998642
Q ss_pred ------cHHHHHHhhccC--CEEEEecCCC
Q 018094 260 ------PLMPLIGLLKSQ--GKLVLVGAPE 281 (361)
Q Consensus 260 ------~~~~~~~~l~~~--G~~v~~g~~~ 281 (361)
.....++.++.. ++++.++...
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~ 108 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIF 108 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence 123344444443 5899887643
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0024 Score=56.17 Aligned_cols=77 Identities=19% Similarity=0.299 Sum_probs=53.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHH---HcCCcE---EecCCCHHHH
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAIE---RLGADS---FLVSRDQDEM 241 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-------------~~~~~~~~~~---~~g~~~---v~~~~~~~~~ 241 (361)
-.++++||.|+ |.+|.+.++.+...|++|+++++ +.++..++.+ +.|... ..|-.+.+.+
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 46789999997 99999999999999999999987 3444444333 234332 2355555544
Q ss_pred HHh-------cCCccEEEEcCCCc
Q 018094 242 QAA-------MGTMDGIIDTVSAV 258 (361)
Q Consensus 242 ~~~-------~~g~d~vid~~g~~ 258 (361)
.++ .+++|++++++|..
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 333 24799999999863
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0016 Score=56.93 Aligned_cols=96 Identities=18% Similarity=0.145 Sum_probs=72.5
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEccc-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag-~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+.......++....--.|.+++|+|.| .+|.-+++++...|++|++..+......+
T Consensus 137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~------------------ 198 (288)
T 1b0a_A 137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRH------------------ 198 (288)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHH------------------
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHH------------------
Confidence 35678777777878776644589999999996 68999999999999999998655433222
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
....+|+||.++|.+..+. .+.++++..++++|..
T Consensus 199 ---~~~~ADIVI~Avg~p~lI~--~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 199 ---HVENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN 233 (288)
T ss_dssp ---HHHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred ---HhccCCEEEECCCCcCcCC--HHHcCCCcEEEEccCC
Confidence 2234799999999886333 2347899999999865
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0021 Score=56.27 Aligned_cols=75 Identities=19% Similarity=0.265 Sum_probs=55.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------c-CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------M-GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~-~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ . ++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999997 99999999999999999999999887665554433 4332 2345555444332 2 67
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 100 id~lv~nAg~ 109 (273)
T 1ae1_A 100 LNILVNNAGV 109 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999999985
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00093 Score=58.46 Aligned_cols=74 Identities=14% Similarity=0.163 Sum_probs=51.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++..++.. -... ...|-.+.+.+.++ .+++|++|+
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 4688999998 999999999999999999999988765432210 0111 12345555443332 248999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 94 nAg~ 97 (266)
T 3p19_A 94 NAGM 97 (266)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9986
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.003 Score=54.76 Aligned_cols=74 Identities=19% Similarity=0.267 Sum_probs=53.1
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~--~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
++++||.|+ |.+|.+.++.+...|++|++++++.++ ..++.+++ +... ..|-.+.+.+.++ .++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 578999997 999999999998889999999988766 44444443 4322 1345555443332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 82 iD~lv~nAg~ 91 (258)
T 3a28_C 82 FDVLVNNAGI 91 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0016 Score=61.79 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=71.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-.|.+|.|+|.|.+|..+++.++.+|++|++++++..+..+. ...|.... .+.++....|+|+.+++....+
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a-~~~G~~~~-------~l~ell~~aDiVi~~~~t~~lI 346 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQA-AMEGYRVV-------TMEYAADKADIFVTATGNYHVI 346 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHH-HTTTCEEC-------CHHHHTTTCSEEEECSSSSCSB
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHH-HHcCCEeC-------CHHHHHhcCCEEEECCCccccc
Confidence 578999999999999999999999999999999887653232 24455321 2445566899999998766544
Q ss_pred -HHHHHhhccCCEEEEecCCC
Q 018094 262 -MPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 262 -~~~~~~l~~~G~~v~~g~~~ 281 (361)
...+..|+++..++++|..+
T Consensus 347 ~~~~l~~MK~gAilINvgrg~ 367 (494)
T 3d64_A 347 NHDHMKAMRHNAIVCNIGHFD 367 (494)
T ss_dssp CHHHHHHCCTTEEEEECSSSS
T ss_pred CHHHHhhCCCCcEEEEcCCCc
Confidence 46778899999999998643
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0016 Score=56.92 Aligned_cols=95 Identities=22% Similarity=0.260 Sum_probs=73.2
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHH
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 241 (361)
..||+...+...++....--.|.+++|+|. +.+|..+++++...|++|++..+.... +
T Consensus 139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~---------------------L 197 (285)
T 3p2o_A 139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD---------------------L 197 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSC---------------------H
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchh---------------------H
Confidence 467888888888887765468999999998 568999999999999999887654322 2
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.+....+|++|.++|.+..+. .+.++++..++++|..
T Consensus 198 ~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 198 SLYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN 234 (285)
T ss_dssp HHHHTTCSEEEECSSCTTCBC--GGGSCTTEEEEECCCE
T ss_pred HHHhhcCCEEEECCCCCCcCC--HHHcCCCeEEEEeccC
Confidence 234456899999999876443 3567898888999864
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0012 Score=62.63 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=68.0
Q ss_pred CCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
.+.+|+|+|+|.+|..++..+... +.+|++++++.++..+++++.+... .++..+.+.+.++..++|+||++++....
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~ 101 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH 101 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence 456899999999999999888877 6799999998887766655444432 23455555555555689999999987532
Q ss_pred HHHHHHhhccCCEEEEec
Q 018094 261 LMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g 278 (361)
......+++++-.++...
T Consensus 102 ~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 102 PNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp HHHHHHHHHHTCEEEECS
T ss_pred HHHHHHHHhcCCEEEEee
Confidence 333455677777777653
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0032 Score=53.70 Aligned_cols=74 Identities=15% Similarity=0.243 Sum_probs=56.2
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcEE---ecCCCHHHHHHhc-------CCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~v---~~~~~~~~~~~~~-------~g~ 248 (361)
++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +.... .|-.+.+.+.++. +++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 578999997 99999999999999999999999987766554433 44322 3556666555443 379
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 82 d~li~~Ag~ 90 (235)
T 3l77_A 82 DVVVANAGL 90 (235)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999999986
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0023 Score=55.60 Aligned_cols=75 Identities=17% Similarity=0.245 Sum_probs=55.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------c-CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------M-GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~-~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ . ++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999997 99999999999999999999999887665554443 4322 2355555444333 2 57
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 88 id~lv~~Ag~ 97 (260)
T 2ae2_A 88 LNILVNNAGI 97 (260)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0019 Score=55.94 Aligned_cols=75 Identities=24% Similarity=0.258 Sum_probs=56.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHhc------CCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM------GTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~------~g~d 249 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++. +++|
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id 85 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE 85 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence 5788999997 99999999999999999999999988776665554 4322 23445554333321 5799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 86 ~lv~nAg~ 93 (252)
T 3h7a_A 86 VTIFNVGA 93 (252)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999985
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0026 Score=55.74 Aligned_cols=92 Identities=13% Similarity=0.058 Sum_probs=64.8
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC--cEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
-.+++++|+|+|++|.+++..+...|+ +|+++.++.++.++++++++. ...+...+ +.. ..+|+||++++..
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~~--~~~DivInaTp~g 192 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LEG--QSFDIVVNATSAS 192 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GTT--CCCSEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hcc--cCCCEEEECCCCC
Confidence 368899999999999999999999997 999999999888888888764 12222221 111 5799999998753
Q ss_pred ccH---HHHHHhhccCCEEEEec
Q 018094 259 HPL---MPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 259 ~~~---~~~~~~l~~~G~~v~~g 278 (361)
..- ......++++..++++.
T Consensus 193 m~~~~~~i~~~~l~~~~~V~Dlv 215 (272)
T 3pwz_A 193 LTADLPPLPADVLGEAALAYELA 215 (272)
T ss_dssp GGTCCCCCCGGGGTTCSEEEESS
T ss_pred CCCCCCCCCHHHhCcCCEEEEee
Confidence 200 00124567777766663
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0015 Score=57.10 Aligned_cols=75 Identities=16% Similarity=0.325 Sum_probs=53.9
Q ss_pred CCCEEEEEc---cchHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHcCCc--E-EecCCCHHHHHHh-------cC--
Q 018094 183 PGMHVGVVG---LGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGAD--S-FLVSRDQDEMQAA-------MG-- 246 (361)
Q Consensus 183 ~g~~VlI~G---ag~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~g~~--~-v~~~~~~~~~~~~-------~~-- 246 (361)
.++++||.| +|.+|.+.++.+...|++|++++++.++ ..++.++++.. . ..|-.+.+.+.++ .+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 468899998 4899999999999999999999988765 35554555532 1 2355555443332 24
Q ss_pred -CccEEEEcCCC
Q 018094 247 -TMDGIIDTVSA 257 (361)
Q Consensus 247 -g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 86 ~~iD~lv~nAg~ 97 (269)
T 2h7i_A 86 NKLDGVVHSIGF 97 (269)
T ss_dssp CCEEEEEECCCC
T ss_pred CCceEEEECCcc
Confidence 79999999985
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0032 Score=53.90 Aligned_cols=75 Identities=24% Similarity=0.369 Sum_probs=56.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CCcE-EecCCCHHHHHHhc---CCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADS-FLVSRDQDEMQAAM---GTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-g~~~-v~~~~~~~~~~~~~---~g~d~vid~~g 256 (361)
.+.++||.|+ |.+|...++.+...|++|++++++.++..++.++. +.+. ..|..+.+.+.++. +++|++|+++|
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 4678999998 99999999999999999999999887766665544 2322 23555666665543 36899999998
Q ss_pred C
Q 018094 257 A 257 (361)
Q Consensus 257 ~ 257 (361)
.
T Consensus 86 ~ 86 (244)
T 1cyd_A 86 L 86 (244)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0026 Score=54.52 Aligned_cols=74 Identities=15% Similarity=0.197 Sum_probs=51.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHH---cCCcE----EecCCCHHHHHHh-------cCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS----FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~~---~g~~~----v~~~~~~~~~~~~-------~~g 247 (361)
++++||.|+ |.+|...++.+...|++|+++ .++.++..++.++ .+... ..|..+.+.+.++ .++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 357999997 999999999999999999998 6776655444333 24321 2255555444333 357
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 81 ~d~li~~Ag~ 90 (245)
T 2ph3_A 81 LDTLVNNAGI 90 (245)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0027 Score=55.90 Aligned_cols=98 Identities=19% Similarity=0.226 Sum_probs=73.6
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
...+|+...+...++....--.|.+++|+|. +.+|..+++++...|++|++..+......
T Consensus 143 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~------------------- 203 (300)
T 4a26_A 143 PFTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED------------------- 203 (300)
T ss_dssp SCCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------
Confidence 3567888888888887765568999999998 56899999999999999988876432111
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+....+|+||.++|.+..+.. ..++++..++++|..
T Consensus 204 l~~~~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 204 MIDYLRTADIVIAAMGQPGYVKG--EWIKEGAAVVDVGTT 241 (300)
T ss_dssp HHHHHHTCSEEEECSCCTTCBCG--GGSCTTCEEEECCCE
T ss_pred hhhhhccCCEEEECCCCCCCCcH--HhcCCCcEEEEEecc
Confidence 01233458999999998764432 457999999999863
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0019 Score=56.92 Aligned_cols=75 Identities=24% Similarity=0.308 Sum_probs=58.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
.++++||.|+ +++|.+.++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++ .+++|++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4788999997 9999999999999999999999998888777777765432 344554433322 3579999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
++++|.
T Consensus 84 vnnAg~ 89 (281)
T 3zv4_A 84 IPNAGI 89 (281)
T ss_dssp ECCCCC
T ss_pred EECCCc
Confidence 999985
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0032 Score=54.68 Aligned_cols=75 Identities=16% Similarity=0.259 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHHc---CCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|+++ .++.++..++.+++ +.... .|-.+.+.+.++ .++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5788999997 999999999999999999987 67766555554443 43322 344555443332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 83 id~lv~nAg~ 92 (258)
T 3oid_A 83 LDVFVNNAAS 92 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0025 Score=54.92 Aligned_cols=75 Identities=23% Similarity=0.336 Sum_probs=55.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999997 99999999999999999999999887766554443 4332 2355555444332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 86 d~lv~nAg~ 94 (247)
T 2jah_A 86 DILVNNAGI 94 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999885
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0027 Score=55.67 Aligned_cols=73 Identities=21% Similarity=0.308 Sum_probs=54.9
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cE---EecCCCHHHHHHhc-------CCccEE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAAM-------GTMDGI 251 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~---v~~~~~~~~~~~~~-------~g~d~v 251 (361)
+++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++.. .. ..|-.+.+.+.++. +++|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 68999997 9999999999999999999999998877666665532 11 23555555544432 368999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
|+++|.
T Consensus 102 vnnAG~ 107 (272)
T 2nwq_A 102 INNAGL 107 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999985
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0023 Score=56.25 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=57.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
-.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .++
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999997 99999999999999999999999988766665543 3221 2355555544433 247
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++|+++|..
T Consensus 110 iD~lvnnAg~~ 120 (276)
T 3r1i_A 110 IDIAVCNAGIV 120 (276)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999863
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0014 Score=57.04 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=65.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHc---CCcE---EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERL---GADS---FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~ 245 (361)
.++++||.|+ +++|.+.++.+...|++|+++.+... +..++.+++ |... ..|-.+.+.+.++ .
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5789999997 99999999999999999999876532 333333333 4322 2345555444333 2
Q ss_pred CCccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 246 GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 246 ~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+++|++|+++|... ..+.++..++++|+++.++..
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~ 149 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS 149 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence 47999999998421 112234445678999999763
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0012 Score=54.88 Aligned_cols=95 Identities=16% Similarity=0.203 Sum_probs=65.0
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.+|||+|+ |.+|...++.+...|.+|++++++.++.... ..-+... ..|..+.+.+.+...++|+||.+++....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS 82 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence 57999998 9999999999999999999999987653211 0112222 23455666777777789999999986431
Q ss_pred --------HHHHHHhhcc--CCEEEEecCC
Q 018094 261 --------LMPLIGLLKS--QGKLVLVGAP 280 (361)
Q Consensus 261 --------~~~~~~~l~~--~G~~v~~g~~ 280 (361)
....++.++. .++++.++..
T Consensus 83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~ 112 (206)
T 1hdo_A 83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (206)
T ss_dssp CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence 2334444433 3588888653
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0038 Score=54.43 Aligned_cols=87 Identities=25% Similarity=0.262 Sum_probs=65.0
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc----
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---- 259 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~---- 259 (361)
+++++|+|+|++|.+++..+...|.+|+++.++.++.++++ +++... ....+ +. .+|+||++++...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~~-~~~~~------l~-~~DiVInaTp~Gm~~~~ 188 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCDC-FMEPP------KS-AFDLIINATSASLHNEL 188 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCEE-ESSCC------SS-CCSEEEECCTTCCCCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeE-ecHHH------hc-cCCEEEEcccCCCCCCC
Confidence 88999999999999999999999999999999999888887 888543 23222 11 7999999977531
Q ss_pred cH--HHHHHhhccCCEEEEecC
Q 018094 260 PL--MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 ~~--~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ......++++..++++.-
T Consensus 189 ~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 189 PLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp SSCHHHHHHHHHHCSEEEESCC
T ss_pred CCChHHHHhhCCCCCEEEEeCC
Confidence 12 112236778888887753
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0037 Score=54.07 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=54.2
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~ 250 (361)
++++||.|+ +++|.+.++.+... |++|+.+.++.++..++.++++.... .|-.+.+.+.++ .+++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 578999997 99999888776655 57999999998887777777764332 345555444332 247999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
+++++|.
T Consensus 82 lvnnAg~ 88 (254)
T 3kzv_A 82 LVANAGV 88 (254)
T ss_dssp EEEECCC
T ss_pred EEECCcc
Confidence 9999986
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0013 Score=57.94 Aligned_cols=95 Identities=20% Similarity=0.167 Sum_probs=67.9
Q ss_pred EEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
+|||+|+ |.+|...++.+... |.+|++++++.++...+ ...+.+.+ .|..+.+.+.++..++|+||.+++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 4899998 99999999998887 89999999988764332 22344332 356677778888889999999988632
Q ss_pred ----cHHHHHHhhccC--CEEEEecCCC
Q 018094 260 ----PLMPLIGLLKSQ--GKLVLVGAPE 281 (361)
Q Consensus 260 ----~~~~~~~~l~~~--G~~v~~g~~~ 281 (361)
.....++.++.. ++++.++...
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~ 108 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYA 108 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence 123455555544 4888887644
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0024 Score=55.40 Aligned_cols=75 Identities=12% Similarity=0.143 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC------------CcE-EecCCCHHHHHHh----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG------------ADS-FLVSRDQDEMQAA---- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g------------~~~-v~~~~~~~~~~~~---- 244 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++. ... ..|-.+.+.+.++
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 4678999998 999999999999999999999998877666544432 111 1344554443332
Q ss_pred ---cCCc-cEEEEcCCC
Q 018094 245 ---MGTM-DGIIDTVSA 257 (361)
Q Consensus 245 ---~~g~-d~vid~~g~ 257 (361)
.+++ |++|.++|.
T Consensus 86 ~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGI 102 (264)
T ss_dssp HHHHSSCCSEEEECCCC
T ss_pred HHHhCCCCeEEEECCCc
Confidence 2356 999999985
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0041 Score=58.69 Aligned_cols=95 Identities=15% Similarity=0.168 Sum_probs=66.4
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC-cE-EecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~-~~-v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
+.+|+|+|+|.+|..++..+...|.+|++++++.++..++.++++. .. ..+..+.+.+.++..++|+|+++++.....
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~ 82 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA 82 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence 4679999999999999998888899999999887766555444442 11 124455555666667899999999874323
Q ss_pred HHHHHhhccCCEEEEec
Q 018094 262 MPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g 278 (361)
.....++.++..++...
T Consensus 83 ~i~~a~l~~g~~vvd~~ 99 (450)
T 1ff9_A 83 TVIKSAIRQKKHVVTTS 99 (450)
T ss_dssp HHHHHHHHHTCEEEESS
T ss_pred HHHHHHHhCCCeEEEee
Confidence 34556677777777653
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0048 Score=54.32 Aligned_cols=75 Identities=11% Similarity=0.216 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHc----CCcEE---ecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERL----GADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~~----g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
.++++||.|+ |++|...++.+...|++|++++++ .++..++.+++ +.... .|-.+.+.+.++ .+
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 4688999997 999999999999999999999984 44444443333 32222 244554443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 104 ~iD~lv~nAg~ 114 (281)
T 3v2h_A 104 GADILVNNAGV 114 (281)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999986
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0015 Score=55.37 Aligned_cols=94 Identities=18% Similarity=0.232 Sum_probs=65.3
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.+|||+|+ |.+|...++.+...|.+|++++++.++...+ .-+.+.+ .|..+.+.+.++..++|+||.++|...
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 57999998 9999999999999999999999987654221 0122221 244566777777779999999998641
Q ss_pred --------cHHHHHHhhccC--CEEEEecCC
Q 018094 260 --------PLMPLIGLLKSQ--GKLVLVGAP 280 (361)
Q Consensus 260 --------~~~~~~~~l~~~--G~~v~~g~~ 280 (361)
.....++.++.. ++++.++..
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~ 113 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGA 113 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence 123345555444 388888754
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.002 Score=60.82 Aligned_cols=91 Identities=18% Similarity=0.208 Sum_probs=71.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-.|.+|.|+|.|.+|..+++.++.+|++|++++++..+..+. ...|... . .+.++....|+|+-+.+....+
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a-~~~g~~~----~---~l~ell~~aDiVi~~~~t~~lI 326 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFNV----V---TLDEIVDKGDFFITCTGNVDVI 326 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCEE----C---CHHHHTTTCSEEEECCSSSSSB
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH-HHcCCEe----c---CHHHHHhcCCEEEECCChhhhc
Confidence 578999999999999999999999999999999887654333 3455531 1 2445566799999998776644
Q ss_pred -HHHHHhhccCCEEEEecCC
Q 018094 262 -MPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 262 -~~~~~~l~~~G~~v~~g~~ 280 (361)
...+..|+++..++++|..
T Consensus 327 ~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 327 KLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CHHHHTTCCTTCEEEECSST
T ss_pred CHHHHhhcCCCcEEEEeCCC
Confidence 3677889999999999864
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0024 Score=56.15 Aligned_cols=75 Identities=19% Similarity=0.272 Sum_probs=54.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 100 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999999999999999999887665544443 4332 2344555443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 101 D~lv~~Ag~ 109 (277)
T 2rhc_B 101 DVLVNNAGR 109 (277)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0026 Score=55.61 Aligned_cols=76 Identities=22% Similarity=0.319 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |++|.+.++.+...|++|+++++. .++..++.+ +.+.... .|-.+.+.+.++ .++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 106 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR 106 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5788999997 999999999999999999998884 333333322 3344322 345555443332 247
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++|+++|..
T Consensus 107 id~lv~nAg~~ 117 (269)
T 4dmm_A 107 LDVLVNNAGIT 117 (269)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999864
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00092 Score=57.26 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=64.3
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+.+|||+|+ |.+|...++.+...|. +|++++++.++..+.. .-+...+ .|..+.+.+.++..++|++|.++|...
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 578999997 9999999999988899 9999998876432211 1122221 244444555566668999999998642
Q ss_pred c--------------HHHHHHhhccC--CEEEEecCCC
Q 018094 260 P--------------LMPLIGLLKSQ--GKLVLVGAPE 281 (361)
Q Consensus 260 ~--------------~~~~~~~l~~~--G~~v~~g~~~ 281 (361)
. ....++.+++. ++++.++...
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~ 134 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG 134 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence 1 12233444333 6899887643
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0024 Score=55.20 Aligned_cols=75 Identities=17% Similarity=0.285 Sum_probs=56.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI 87 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999988766665544 3322 2344554443332 2489
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 88 d~li~~Ag~ 96 (253)
T 3qiv_A 88 DYLVNNAAI 96 (253)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 999999986
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0029 Score=55.55 Aligned_cols=76 Identities=20% Similarity=0.356 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HHcCCcEE---ecCCCHHHHHH
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADSF---LVSRDQDEMQA 243 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~------------~~~~~~~~---~~~g~~~v---~~~~~~~~~~~ 243 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++ .++..+.. +..+.... .|-.+.+.+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 5789999997 999999999999999999999876 33333332 23344322 34555544433
Q ss_pred h-------cCCccEEEEcCCCc
Q 018094 244 A-------MGTMDGIIDTVSAV 258 (361)
Q Consensus 244 ~-------~~g~d~vid~~g~~ 258 (361)
+ .+++|++|+++|..
T Consensus 92 ~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCC
Confidence 2 24799999999864
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00077 Score=59.50 Aligned_cols=102 Identities=17% Similarity=0.150 Sum_probs=65.9
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC-----cE-EecCCCHHHHHHhc
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA-----DS-FLVSRDQDEMQAAM 245 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~-----~~-v~~~~~~~~~~~~~ 245 (361)
.++.....--.++++||+|+|++|.+++..+...|+ +|+++.++.++.++++++++. .. ..+..+ +.+..
T Consensus 116 ~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l 192 (283)
T 3jyo_A 116 RGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVI 192 (283)
T ss_dssp HHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHH
T ss_pred HHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHH
Confidence 445444322468899999999999999999999999 799999998887777666542 11 122212 22333
Q ss_pred CCccEEEEcCCCcccH----HHHHHhhccCCEEEEe
Q 018094 246 GTMDGIIDTVSAVHPL----MPLIGLLKSQGKLVLV 277 (361)
Q Consensus 246 ~g~d~vid~~g~~~~~----~~~~~~l~~~G~~v~~ 277 (361)
..+|+||+++.....- ......++++..++++
T Consensus 193 ~~~DiVInaTp~Gm~~~~~~pi~~~~l~~~~~v~Dl 228 (283)
T 3jyo_A 193 AAADGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDV 228 (283)
T ss_dssp HHSSEEEECSSTTSTTSCSCSSCGGGCCTTCEEEEC
T ss_pred hcCCEEEECCCCCCCCCCCCCCCHHHhCCCCEEEEe
Confidence 4689999998643100 0123456666655555
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0053 Score=54.11 Aligned_cols=75 Identities=29% Similarity=0.364 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-------HHHH---HHHcCCcEE---ecCCCHHHHHHh----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEA---IERLGADSF---LVSRDQDEMQAA---- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-------~~~~---~~~~g~~~v---~~~~~~~~~~~~---- 244 (361)
.++++||.|+ +++|.+.++.+...|++|++++++.++ ..+. .++.+.... .|-.+.+.+.++
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 5789999997 999999999999999999999998762 2222 233454322 255555443332
Q ss_pred ---cCCccEEEEcCCC
Q 018094 245 ---MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ---~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 88 ~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 88 VEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 2479999999985
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0047 Score=52.94 Aligned_cols=76 Identities=17% Similarity=0.272 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|+++ .++.++..++.++ .+... ..|-.+.+.+.++ .++
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999997 999999999999999999998 4555444433332 34332 1344555444432 247
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++|.++|..
T Consensus 84 ~d~vi~~Ag~~ 94 (247)
T 2hq1_A 84 IDILVNNAGIT 94 (247)
T ss_dssp CCEEEECC---
T ss_pred CCEEEECCCCC
Confidence 99999998853
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0039 Score=54.93 Aligned_cols=75 Identities=21% Similarity=0.276 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC----------------chhHHHHHHH---cCCcE---EecCCCHH
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------------PSKKSEAIER---LGADS---FLVSRDQD 239 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~----------------~~~~~~~~~~---~g~~~---v~~~~~~~ 239 (361)
.++++||.|+ +++|.+.++.+...|++|++++++ .++..++.++ .+... ..|-.+.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 5789999997 999999999999999999999876 3444343333 23322 23555554
Q ss_pred HHHHh-------cCCccEEEEcCCC
Q 018094 240 EMQAA-------MGTMDGIIDTVSA 257 (361)
Q Consensus 240 ~~~~~-------~~g~d~vid~~g~ 257 (361)
.+.++ .+++|++|+++|.
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcc
Confidence 44332 2479999999985
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0027 Score=55.29 Aligned_cols=75 Identities=13% Similarity=0.240 Sum_probs=51.6
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHHcCCcEE--ecCCCHHHHHHhc-------CC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIERLGADSF--LVSRDQDEMQAAM-------GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~---~~~~~~~~~~g~~~v--~~~~~~~~~~~~~-------~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++. +...++.++.+.... .|-.+.+.+.++. ++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 6999999999999999999999876 223333333343222 3555555443322 37
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 88 iD~lv~~Ag~ 97 (265)
T 1qsg_A 88 FDGFVHSIGF 97 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0032 Score=55.24 Aligned_cols=77 Identities=21% Similarity=0.316 Sum_probs=53.3
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHH---HcCCcE---EecCCCHHHH
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-------------SPSKKSEAIE---RLGADS---FLVSRDQDEM 241 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-------------~~~~~~~~~~---~~g~~~---v~~~~~~~~~ 241 (361)
-.++++||.|+ +++|.+.++.+...|++|+++++ +.++..+..+ ..+... ..|-.+.+.+
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL 88 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 35789999997 99999999999999999999987 3444333333 234332 2355555444
Q ss_pred HHh-------cCCccEEEEcCCCc
Q 018094 242 QAA-------MGTMDGIIDTVSAV 258 (361)
Q Consensus 242 ~~~-------~~g~d~vid~~g~~ 258 (361)
.++ .+++|++|+++|..
T Consensus 89 ~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 89 RKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 332 24799999999863
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0081 Score=52.57 Aligned_cols=75 Identities=24% Similarity=0.340 Sum_probs=53.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHH---HHcCCcE---EecCCCHHHHHHh----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-------KSEAI---ERLGADS---FLVSRDQDEMQAA---- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-------~~~~~---~~~g~~~---v~~~~~~~~~~~~---- 244 (361)
.++++||.|+ +++|.+.++.+...|++|++++++.++ ..+.. +..+... ..|-.+.+.+.++
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 5789999997 999999999999999999999988653 22222 2334432 2355555443332
Q ss_pred ---cCCccEEEEcCCC
Q 018094 245 ---MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ---~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 85 ~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 85 VDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 2479999999985
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0025 Score=56.96 Aligned_cols=89 Identities=19% Similarity=0.348 Sum_probs=67.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++ . ..+++|++.. +. .++....|+|+.++....
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g~~~~----~l---~ell~~aDvV~l~~p~~~~t 210 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVNGKFV----DL---ETLLKESDVVTIHVPLVEST 210 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTTCEEC----CH---HHHHHHCSEEEECCCCSTTT
T ss_pred cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcCcccc----CH---HHHHhhCCEEEEecCCChHH
Confidence 36789999999999999999999999999999988765 2 3357776431 22 233346899999877532
Q ss_pred --cH-HHHHHhhccCCEEEEecC
Q 018094 260 --PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..+++++.+++++.
T Consensus 211 ~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 211 YHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSC
T ss_pred hhhcCHHHHhcCCCCeEEEECCC
Confidence 12 456788999999999975
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0017 Score=54.52 Aligned_cols=100 Identities=30% Similarity=0.313 Sum_probs=68.0
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---HcCCcEE-ecCCCHHHHHHhcCCccEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~g~d~v 251 (361)
...++++++||.+|+| .|..+..+++..+ .+|+.++.+++....+.+ +.+...+ +...+........+.+|+|
T Consensus 72 ~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 150 (215)
T 2yxe_A 72 LLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRI 150 (215)
T ss_dssp HTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEE
T ss_pred hhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEE
Confidence 3456899999999998 5888889998876 799999988765443322 2343221 1112211100113479999
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEec
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g 278 (361)
+......+....+.+.|+++|+++..-
T Consensus 151 ~~~~~~~~~~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 151 YTTAAGPKIPEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp EESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred EECCchHHHHHHHHHHcCCCcEEEEEE
Confidence 998777666678899999999998763
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0032 Score=55.62 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHc----CCcE---EecCCC----HHHHHHh-----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERL----GADS---FLVSRD----QDEMQAA----- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~~~~----g~~~---v~~~~~----~~~~~~~----- 244 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++. ++..++.+++ +... ..|-.+ .+.+.++
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 4688999997 9999999999999999999999987 6554444433 4322 134455 4433332
Q ss_pred --cCCccEEEEcCCC
Q 018094 245 --MGTMDGIIDTVSA 257 (361)
Q Consensus 245 --~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 102 RAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 2479999999984
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0042 Score=54.88 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHHhc-----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAAM----- 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~---~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~~----- 245 (361)
.++++||.|+ |++|.+.+..+...|+ +|++++++.++..++.+++ +... ..|-.+.+.+.++.
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 4688999997 9999999887776666 9999999988776665544 3322 13455555444332
Q ss_pred --CCccEEEEcCCC
Q 018094 246 --GTMDGIIDTVSA 257 (361)
Q Consensus 246 --~g~d~vid~~g~ 257 (361)
+++|++|+++|.
T Consensus 112 ~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 112 EFKDIDILVNNAGK 125 (287)
T ss_dssp GGCSCCEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 379999999984
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0015 Score=57.00 Aligned_cols=75 Identities=21% Similarity=0.282 Sum_probs=55.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---C-CcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-ADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g-~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..+++ + ... ..|-.+.+.+.++ .++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999997 99999999999999999999999988766655544 2 121 2344555443332 248
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++++++|.
T Consensus 89 id~lvnnAg~ 98 (262)
T 3pk0_A 89 IDVVCANAGV 98 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0021 Score=56.58 Aligned_cols=75 Identities=23% Similarity=0.304 Sum_probs=56.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++..++.+++ +.... .|-.+.+.+.++ .+++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999997 99999999999999999999999988777776665 33222 244454443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 87 D~lvnnAg~ 95 (280)
T 3tox_A 87 DTAFNNAGA 95 (280)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0042 Score=50.17 Aligned_cols=99 Identities=15% Similarity=0.189 Sum_probs=66.7
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHH---HHcCCc-EE-ecCCCHHHHHHhcCCccEEEE
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAI---ERLGAD-SF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~---~~~g~~-~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
.++++++||-+|+|. |..+..+++.. +.+|+.++.+++....+. ++.+.. .+ +.....+.+....+.+|+|+.
T Consensus 22 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 22 APKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEE
T ss_pred cccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEE
Confidence 468899999999985 88888999887 568998888876543332 234543 22 222222222222257999997
Q ss_pred cCCCcc--cHHHHHHhhccCCEEEEecC
Q 018094 254 TVSAVH--PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 254 ~~g~~~--~~~~~~~~l~~~G~~v~~g~ 279 (361)
...... .+..+.+.|+++|+++....
T Consensus 101 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 101 GGGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 664443 58889999999999987643
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0086 Score=52.55 Aligned_cols=75 Identities=16% Similarity=0.312 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC------------chhHHHH---HHHcCCcEE---ecCCCHHHHHH
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEA---IERLGADSF---LVSRDQDEMQA 243 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~------------~~~~~~~---~~~~g~~~v---~~~~~~~~~~~ 243 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++ .++..+. .++.+.... .|-.+.+.+.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 5789999997 999999999999999999999986 2222222 234454322 35555544333
Q ss_pred h-------cCCccEEEEcCCC
Q 018094 244 A-------MGTMDGIIDTVSA 257 (361)
Q Consensus 244 ~-------~~g~d~vid~~g~ 257 (361)
+ .+++|++|+++|.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 2 2479999999985
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0037 Score=54.80 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=52.4
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCC-cE-EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGA-DS-FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~-~~-v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|++++++.+ ...++.++.+. .. ..|-.+.+.+.++ .++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 69999999999999999999998865 33334333442 22 2355555444332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 85 id~lv~nAg~ 94 (275)
T 2pd4_A 85 LDFIVHSVAF 94 (275)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999985
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0035 Score=54.45 Aligned_cols=75 Identities=20% Similarity=0.329 Sum_probs=51.9
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADSF--LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|++++++.+ ...++.++++.... .|-.+.+.+.++ .++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 69999999988888999999998865 23333333443222 355555444332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 87 iD~lv~~Ag~ 96 (261)
T 2wyu_A 87 LDYLVHAIAF 96 (261)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0054 Score=55.09 Aligned_cols=75 Identities=21% Similarity=0.287 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC---------CchhHHHHHHH---cCCcEEecCCCHHHHHH------
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAIER---LGADSFLVSRDQDEMQA------ 243 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~---------~~~~~~~~~~~---~g~~~v~~~~~~~~~~~------ 243 (361)
.++++||.|+ |.+|...++.+...|++|+++++ +.++..++.++ .+...+.|..+.+.+.+
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 5788999997 99999999999999999999753 44444333333 34444556655443222
Q ss_pred -hcCCccEEEEcCCC
Q 018094 244 -AMGTMDGIIDTVSA 257 (361)
Q Consensus 244 -~~~g~d~vid~~g~ 257 (361)
..+++|++|+++|.
T Consensus 88 ~~~g~iD~lVnnAG~ 102 (319)
T 1gz6_A 88 DTFGRIDVVVNNAGI 102 (319)
T ss_dssp HHTSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 23579999999984
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0022 Score=56.95 Aligned_cols=75 Identities=24% Similarity=0.297 Sum_probs=56.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC----cE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~----~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++.. .. ..|-.+.+.+.++ .++
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 5789999997 9999999999999999999999998887776666532 11 2345555443332 357
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 120 iD~lvnnAg~ 129 (293)
T 3rih_A 120 LDVVCANAGI 129 (293)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0054 Score=52.45 Aligned_cols=74 Identities=22% Similarity=0.259 Sum_probs=51.0
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
|+++||.|+ |.+|...++.+...|++|+++ .++.++..++.++ .+... ..|-.+.+.+.++ .+++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999997 999999999999999999985 6666554444333 34322 1344555444332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 81 d~li~~Ag~ 89 (244)
T 1edo_A 81 DVVVNNAGI 89 (244)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999885
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0078 Score=54.47 Aligned_cols=75 Identities=11% Similarity=0.051 Sum_probs=55.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----------CCcE-EecCCCHHHHHHhcCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----------GADS-FLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----------g~~~-v~~~~~~~~~~~~~~g~d~ 250 (361)
.+.+|||+|+ |.+|...++.+...|.+|+++++......+..+.+ +... ..|..+.+.+.++..++|+
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 4578999998 99999999999999999999998655332222221 2222 2355666777777789999
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
||.+++.
T Consensus 104 Vih~A~~ 110 (351)
T 3ruf_A 104 VLHQAAL 110 (351)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999985
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0024 Score=56.00 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=55.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
.|+++||.|+ |.+|.+.++.+...|++|++++++.++..+..+++ |.... .|-.+.+.+.++ .+++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV 104 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 5789999997 99999999999999999999999887766655544 43322 244454443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++++++|.
T Consensus 105 D~lv~nAg~ 113 (271)
T 4ibo_A 105 DILVNNAGI 113 (271)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0021 Score=55.52 Aligned_cols=93 Identities=20% Similarity=0.241 Sum_probs=63.2
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHh-------cCCccEEEE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.-++++||.|+ |.+|.+.++.+...|++|++++++.++... ....++..+.+.+.++ .+++|++|.
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVC 93 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 34688999998 999999999999999999999988765321 1122344454433322 247899999
Q ss_pred cCCCc-------c-------------------cHHHHHHhhccCCEEEEecCC
Q 018094 254 TVSAV-------H-------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 254 ~~g~~-------~-------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++|.. . ..+.++..++++|+++.++..
T Consensus 94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 146 (251)
T 3orf_A 94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS 146 (251)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence 99841 1 123345556678999999764
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0026 Score=55.85 Aligned_cols=75 Identities=16% Similarity=0.213 Sum_probs=54.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEE---ecCCCHHHHHHh-------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSF---LVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v---~~~~~~~~~~~~-------~~g~d 249 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..+++.. ... .|-.+.+.+.++ .+++|
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD 107 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4678999998 9999999999999999999999988776666555431 211 244444433332 24799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 108 ~lvnnAg~ 115 (276)
T 2b4q_A 108 ILVNNAGT 115 (276)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0025 Score=53.21 Aligned_cols=98 Identities=21% Similarity=0.115 Sum_probs=67.0
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEE-ecCCCHHHHHHhcCCccEEEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
...++++++||-+|+| .|..+..+++. +.+|+.++.+++....+.+ +.+...+ +...+........+.+|+|+.
T Consensus 72 ~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~ 149 (210)
T 3lbf_A 72 LLELTPQSRVLEIGTG-SGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIV 149 (210)
T ss_dssp HTTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred hcCCCCCCEEEEEcCC-CCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEE
Confidence 3456899999999987 47888888888 7899999998876544322 3343321 222221111111357999999
Q ss_pred cCCCcccHHHHHHhhccCCEEEEe
Q 018094 254 TVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
...-.+....+.+.|+++|+++..
T Consensus 150 ~~~~~~~~~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 150 TAAPPEIPTALMTQLDEGGILVLP 173 (210)
T ss_dssp SSBCSSCCTHHHHTEEEEEEEEEE
T ss_pred ccchhhhhHHHHHhcccCcEEEEE
Confidence 877666667889999999998866
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0043 Score=54.02 Aligned_cols=76 Identities=13% Similarity=0.211 Sum_probs=56.5
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
-.++++||.|+ +.+|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 36789999997 99999999999999999999999988766655543 4322 2355555443332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 89 id~lv~nAg~ 98 (264)
T 3ucx_A 89 VDVVINNAFR 98 (264)
T ss_dssp CSEEEECCCS
T ss_pred CcEEEECCCC
Confidence 9999999975
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0026 Score=54.11 Aligned_cols=73 Identities=18% Similarity=0.204 Sum_probs=55.9
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc---EEecCCCHHHHHHhc----CCccEEEEcCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAM----GTMDGIIDTVS 256 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~----~g~d~vid~~g 256 (361)
+++||.|+ |++|.+.+..+...|++|++++++.++..++.++++.. ...|-.+.+.+.++. ..+|++++++|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence 36899997 99999999999999999999999998887777776532 223556665555543 24599999998
Q ss_pred C
Q 018094 257 A 257 (361)
Q Consensus 257 ~ 257 (361)
.
T Consensus 82 ~ 82 (230)
T 3guy_A 82 S 82 (230)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.007 Score=53.51 Aligned_cols=75 Identities=16% Similarity=0.102 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHHc----CCcEE---ecCCCHH--------------
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIERL----GADSF---LVSRDQD-------------- 239 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~-~~~~~~~~~~~~~----g~~~v---~~~~~~~-------------- 239 (361)
.++++||.|+ |.+|.+.++.+...|++|++++ ++.++..++.+++ +.... .|-.+.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 87 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence 4678999997 9999999999999999999999 8877655554433 43221 2333333
Q ss_pred ---HHHHh-------cCCccEEEEcCCC
Q 018094 240 ---EMQAA-------MGTMDGIIDTVSA 257 (361)
Q Consensus 240 ---~~~~~-------~~g~d~vid~~g~ 257 (361)
.+.++ .+++|++|+++|.
T Consensus 88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~ 115 (291)
T 1e7w_A 88 LFTRCAELVAACYTHWGRCDVLVNNASS 115 (291)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 33322 2479999999985
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0032 Score=54.61 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=54.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..+++ +... ..|..+.+.+.++ .+++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5788999997 99999999999999999999999877655544333 4322 2344554433332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|+++|.
T Consensus 93 D~lv~~Ag~ 101 (260)
T 2zat_A 93 DILVSNAAV 101 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999985
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.004 Score=53.85 Aligned_cols=75 Identities=20% Similarity=0.281 Sum_probs=54.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5688999997 99999999999999999999999877655443333 4322 2344555444333 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 92 d~vi~~Ag~ 100 (260)
T 3awd_A 92 DILVACAGI 100 (260)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999884
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0027 Score=55.85 Aligned_cols=73 Identities=25% Similarity=0.316 Sum_probs=56.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHhc------CCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAAM------GTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~~------~g~d~vi 252 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++..++.++++.... .|-.+.+.+.++. ++.|++|
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 5688999998 9999999999999999999999999888888777775432 3445554433321 3689999
Q ss_pred EcC
Q 018094 253 DTV 255 (361)
Q Consensus 253 d~~ 255 (361)
.+.
T Consensus 109 ~~a 111 (281)
T 3ppi_A 109 VAH 111 (281)
T ss_dssp ECC
T ss_pred Ecc
Confidence 983
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0035 Score=53.78 Aligned_cols=75 Identities=17% Similarity=0.269 Sum_probs=54.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCcE---EecCCCHHHHHHhc-------CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADS---FLVSRDQDEMQAAM-------GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~~-------~g 247 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.++ .+... ..|..+.+.+.++. ++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4678999997 9999999999999999999999987765554333 34332 12445554444332 47
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 86 ~d~vi~~Ag~ 95 (248)
T 2pnf_A 86 IDILVNNAGI 95 (248)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999885
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0088 Score=51.59 Aligned_cols=75 Identities=15% Similarity=0.105 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCe-EEEEeCCch--hHHHHHHHc-CCcE---EecCCCH-HHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPS--KKSEAIERL-GADS---FLVSRDQ-DEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~-Vi~~~~~~~--~~~~~~~~~-g~~~---v~~~~~~-~~~~~~-------~~ 246 (361)
.++++||+|+ |.+|...++.+...|++ |++++++.+ ...++.+.. +... ..|-.+. +.+.++ .+
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4678999997 99999999999999996 888888753 333443332 2221 1344443 333322 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 84 ~id~lv~~Ag~ 94 (254)
T 1sby_A 84 TVDILINGAGI 94 (254)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999985
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0046 Score=54.37 Aligned_cols=76 Identities=22% Similarity=0.305 Sum_probs=55.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |++|.+.+..+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 99999999999999999999999988766655544 4332 1355555443332 2479
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|+++|..
T Consensus 103 d~lv~nAg~~ 112 (279)
T 3sju_A 103 GILVNSAGRN 112 (279)
T ss_dssp CEEEECCCCC
T ss_pred cEEEECCCCC
Confidence 9999999863
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0059 Score=53.09 Aligned_cols=75 Identities=20% Similarity=0.311 Sum_probs=55.3
Q ss_pred CCCEEEEEcc-c-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---C-CcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-ADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g-~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g-~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.++++||+|+ | ++|...+..+...|++|++++++.++..+..+++ + ... ..|-.+.+.+.++ .+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 5789999998 7 7999999999999999999999988766665554 2 111 2345555443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 101 ~id~li~~Ag~ 111 (266)
T 3o38_A 101 RLDVLVNNAGL 111 (266)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 79999999985
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0039 Score=56.87 Aligned_cols=70 Identities=24% Similarity=0.284 Sum_probs=52.0
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
-.|++|+|.|.|.+|..+++.+..+|++|++.+.+.++..++.+++|++.+ +. +.+ +...+|+++-|+..
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~---~~l--l~~~~DIvip~a~~ 240 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-AP---NAI--YGVTCDIFAPCALG 240 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CG---GGT--TTCCCSEEEECSCS
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-Ch---HHH--hccCCcEeeccchH
Confidence 478999999999999999999999999999888887777777778886543 11 110 11256777666543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0027 Score=53.53 Aligned_cols=91 Identities=22% Similarity=0.308 Sum_probs=61.8
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCc-----
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV----- 258 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~----- 258 (361)
+|||+|+ |.+|...+..+...|.+|++++++.++..++ ..-+.+.+ .|..+.+. +...++|+||.++|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-LGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-TCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-cCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 5899998 9999999999999999999999987765433 12233332 23333233 4456899999999873
Q ss_pred -----ccHHHHHHhhc-cCCEEEEecC
Q 018094 259 -----HPLMPLIGLLK-SQGKLVLVGA 279 (361)
Q Consensus 259 -----~~~~~~~~~l~-~~G~~v~~g~ 279 (361)
......++.++ .+++++.++.
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS 105 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSDTLAVFILG 105 (224)
T ss_dssp THHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred hhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 11234455553 3478888854
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0043 Score=53.35 Aligned_cols=76 Identities=25% Similarity=0.344 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|+++++.. ++..++.+ +.+.+.. .|-.+.+.+.++ .++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 9999999999999999999987754 43333333 3344322 344555443332 247
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++++++|..
T Consensus 83 id~lv~nAg~~ 93 (246)
T 3osu_A 83 LDVLVNNAGIT 93 (246)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 99999999853
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0035 Score=53.84 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=54.3
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcE---EecCCCHHHHHHhc-------CCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAAM-------GTM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~~-------~g~ 248 (361)
++++||+|+ |.+|...+..+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++. +++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 578999997 99999999999999999999999887766655544 3221 23445554444332 479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 82 d~li~~Ag~ 90 (250)
T 2cfc_A 82 DVLVNNAGI 90 (250)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999874
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0038 Score=54.90 Aligned_cols=100 Identities=17% Similarity=0.034 Sum_probs=66.7
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCc---EEecCCCHHHHHHhcCCc
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAMGTM 248 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~g~ 248 (361)
.+|.....--.+++++|+|+|.+|.+++..+...|+ +|+++.++.++.++++++++.. ...... ++..++
T Consensus 115 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~------~l~~~a 188 (281)
T 3o8q_A 115 QDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFE------QLKQSY 188 (281)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------GCCSCE
T ss_pred HHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHH------HhcCCC
Confidence 345443322368899999999999999999999997 9999999998888887777631 222211 122579
Q ss_pred cEEEEcCCCcccHHH---HHHhhccCCEEEEec
Q 018094 249 DGIIDTVSAVHPLMP---LIGLLKSQGKLVLVG 278 (361)
Q Consensus 249 d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g 278 (361)
|+||++++....-.. ....++++..++++.
T Consensus 189 DiIInaTp~gm~~~~~~l~~~~l~~~~~V~Dlv 221 (281)
T 3o8q_A 189 DVIINSTSASLDGELPAIDPVIFSSRSVCYDMM 221 (281)
T ss_dssp EEEEECSCCCC----CSCCGGGEEEEEEEEESC
T ss_pred CEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEec
Confidence 999999876531110 123456666666664
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0032 Score=54.30 Aligned_cols=75 Identities=23% Similarity=0.383 Sum_probs=53.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHc---CCcE---EecCCCHHHHHHhc-------CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERL---GADS---FLVSRDQDEMQAAM-------GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~-------~g 247 (361)
.++++||.|+ |.+|...+..+...|++|++++++ .++..++.+++ +... ..|..+.+.+.++. ++
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 999999999999999999999998 66555444433 4321 13445554444332 37
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 86 id~vi~~Ag~ 95 (258)
T 3afn_B 86 IDVLINNAGG 95 (258)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0087 Score=53.63 Aligned_cols=76 Identities=22% Similarity=0.315 Sum_probs=52.6
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HHcCCcEE---ecCCCHHHHH
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADSF---LVSRDQDEMQ 242 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~------------~~~~~~~~---~~~g~~~v---~~~~~~~~~~ 242 (361)
-.++++||.|+ |++|.+.++.+...|++|++++++ .++..+.. ++.+.... .|-.+.+.+.
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 35789999997 999999999999999999999765 33333322 23444322 3555554433
Q ss_pred Hh-------cCCccEEEEcCCC
Q 018094 243 AA-------MGTMDGIIDTVSA 257 (361)
Q Consensus 243 ~~-------~~g~d~vid~~g~ 257 (361)
++ .+++|++|+++|.
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 32 2479999999985
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0013 Score=55.80 Aligned_cols=84 Identities=21% Similarity=0.190 Sum_probs=59.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc---CCccEEEEcCCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---~g~d~vid~~g~~ 258 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.+ .|-.+.+.+.++. +++|++++++|..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4678999997 99999999999889999999887643 2344444433332 5789999998853
Q ss_pred c--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 259 H--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 259 ~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
. ..+.++..++++|+++.++..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~ 118 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM 118 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence 1 122344456678999999763
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0095 Score=50.34 Aligned_cols=117 Identities=15% Similarity=0.028 Sum_probs=71.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
-.|.+|||+|+|.+|...+..+...|++|++++..... ...+.++.+...+...-.+ ....++|+||-+.+...
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~----~dL~~adLVIaAT~d~~- 103 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE----EDLLNVFFIVVATNDQA- 103 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG----GGSSSCSEEEECCCCTH-
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH----hHhCCCCEEEECCCCHH-
Confidence 35788999999999999999999999999999876542 3334333223322111111 12357999999999887
Q ss_pred HHHHHHhhccCCEEEEecCCCCCcccChHH-HhhCCcEEEeccc
Q 018094 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS-LLMGRKIVGGSMI 303 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~g~~~ 303 (361)
++..+...+..|..|++...+...++-... +-...+.+.=+..
T Consensus 104 ~N~~I~~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~ 147 (223)
T 3dfz_A 104 VNKFVKQHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTD 147 (223)
T ss_dssp HHHHHHHHSCTTCEEEC-----CCSEECCEEEEETTEEEEEECT
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECC
Confidence 666555555588888886654333222212 2234566654443
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0041 Score=53.72 Aligned_cols=75 Identities=16% Similarity=0.205 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----C-Cc-E--EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----G-AD-S--FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g-~~-~--v~~~~~~~~~~~~-------~ 245 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++..++.+++ + .. . ..|-.+.+.+.++ .
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5788999998 99999999999889999999999988766655443 2 11 1 2355555443332 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++|+++|.
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999986
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0021 Score=55.61 Aligned_cols=89 Identities=25% Similarity=0.311 Sum_probs=56.6
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHHc---CC-cEE--ecC-C
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAIERL---GA-DSF--LVS-R 236 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~-------------------~~~~~~~~~~---g~-~~v--~~~-~ 236 (361)
+.+|+|+|+|++|..+++.+...|. ++++++... .|.+.+.+++ .. ..+ +.. -
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 4689999999999999999999998 788888775 4544443333 22 122 111 1
Q ss_pred CHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCC
Q 018094 237 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQG 272 (361)
Q Consensus 237 ~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G 272 (361)
+++.+.+...++|+||+++++..+-....+.+...|
T Consensus 111 ~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~ 146 (249)
T 1jw9_B 111 DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAK 146 (249)
T ss_dssp CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence 233444445689999999988663333333333334
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0041 Score=57.86 Aligned_cols=94 Identities=17% Similarity=0.174 Sum_probs=69.5
Q ss_pred EEEEEccchHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHHcC------CcE-EecCCCHHHHHHhcC--CccEEEE
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIERLG------ADS-FLVSRDQDEMQAAMG--TMDGIID 253 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g---~~Vi~~~~~~~~~~~~~~~~g------~~~-v~~~~~~~~~~~~~~--g~d~vid 253 (361)
+|+|+|+|.+|..+++.+...| .+|++++++.++..+++++++ ... .+|..+.+.+.++.. ++|+||+
T Consensus 3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin 82 (405)
T 4ina_A 3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLN 82 (405)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEE
Confidence 6899999999999999888887 499999999888877777654 222 235555566666544 4899999
Q ss_pred cCCCcccHHHHHHhhccCCEEEEecC
Q 018094 254 TVSAVHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 254 ~~g~~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
+++..........+++.+-.++.+..
T Consensus 83 ~ag~~~~~~v~~a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 83 IALPYQDLTIMEACLRTGVPYLDTAN 108 (405)
T ss_dssp CSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred CCCcccChHHHHHHHHhCCCEEEecC
Confidence 99875434556667788888887644
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0032 Score=55.10 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHc----CCcEE---ecCCCH----HHHHHh-----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERL----GADSF---LVSRDQ----DEMQAA----- 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~~----g~~~v---~~~~~~----~~~~~~----- 244 (361)
.++++||.|+ |.+|.+.+..+...|++|+++++ +.++..++.+++ +.... .|-.+. +.+.++
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4678999997 99999999999999999999999 766655554443 43221 244444 433332
Q ss_pred --cCCccEEEEcCCC
Q 018094 245 --MGTMDGIIDTVSA 257 (361)
Q Consensus 245 --~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 90 ~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 90 RAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 2479999999984
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0043 Score=52.53 Aligned_cols=98 Identities=24% Similarity=0.249 Sum_probs=67.1
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCC------CeEEEEeCCchhHHHHHH---HcC-----C-cEEecCCCH-HHHH-
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG------VKVTVISTSPSKKSEAIE---RLG-----A-DSFLVSRDQ-DEMQ- 242 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g------~~Vi~~~~~~~~~~~~~~---~~g-----~-~~v~~~~~~-~~~~- 242 (361)
.++++++||-+|+|. |..+..+++..+ .+|+.++.+++....+.+ +.+ . ...+...+. +...
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence 468899999999876 888889998876 599999988765433322 233 1 111111221 1110
Q ss_pred --HhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEec
Q 018094 243 --AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 243 --~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 278 (361)
...+.+|+|+........+..+.+.|+++|+++..-
T Consensus 156 ~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp HHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 123579999988777777888999999999988763
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0019 Score=55.99 Aligned_cols=75 Identities=15% Similarity=0.227 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 90 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI 90 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 99999999999889999999999887665554433 4332 2344555443332 2479
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++++++|.
T Consensus 91 d~lv~nAg~ 99 (256)
T 3gaf_A 91 TVLVNNAGG 99 (256)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999986
|
| >2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0032 Score=54.85 Aligned_cols=97 Identities=25% Similarity=0.373 Sum_probs=72.4
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEccc-hHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCcEEecCCCH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSFLVSRDQ 238 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag-~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~ 238 (361)
..+||+..++...+++...--.|.+++|+|.| .+|..+++++... |++|++..+....
T Consensus 136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~------------------- 196 (281)
T 2c2x_A 136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRD------------------- 196 (281)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSC-------------------
T ss_pred CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhH-------------------
Confidence 35678777788888777533589999999996 5799999999999 8999987544322
Q ss_pred HHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 239 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+....+|++|.++|.+..+. .+.++++..++++|...
T Consensus 197 --L~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~r 235 (281)
T 2c2x_A 197 --LPALTRQADIVVAAVGVAHLLT--ADMVRPGAAVIDVGVSR 235 (281)
T ss_dssp --HHHHHTTCSEEEECSCCTTCBC--GGGSCTTCEEEECCEEE
T ss_pred --HHHHHhhCCEEEECCCCCcccC--HHHcCCCcEEEEccCCC
Confidence 2333456899999999886433 34578888889998653
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0048 Score=55.65 Aligned_cols=76 Identities=20% Similarity=0.189 Sum_probs=54.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----C--CcEE-ecCCCHHHHHHhcC--CccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G--ADSF-LVSRDQDEMQAAMG--TMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g--~~~v-~~~~~~~~~~~~~~--g~d~vi 252 (361)
.+.+|||.|+ |.+|...++.+...|.+|+++++..++..+..+++ + ...+ .|..+.+.+.++.. ++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 4568999997 99999999999999999999998765543333322 3 2221 24455666666544 899999
Q ss_pred EcCCCc
Q 018094 253 DTVSAV 258 (361)
Q Consensus 253 d~~g~~ 258 (361)
.+++..
T Consensus 84 h~A~~~ 89 (341)
T 3enk_A 84 HFAALK 89 (341)
T ss_dssp ECCCCC
T ss_pred ECcccc
Confidence 999864
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0061 Score=52.13 Aligned_cols=71 Identities=21% Similarity=0.322 Sum_probs=50.2
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCH--H-HHH---HhcCCccEEEEcC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQ--D-EMQ---AAMGTMDGIIDTV 255 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~--~-~~~---~~~~g~d~vid~~ 255 (361)
++++||.|+ |.+|.+.++.+...|++|++++++.++ ..++++...+ .|-.++ + .+. +..+++|++++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence 568999998 999999999999999999999998765 2345564322 233331 1 122 2235799999998
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
|.
T Consensus 79 g~ 80 (239)
T 2ekp_A 79 AV 80 (239)
T ss_dssp CC
T ss_pred CC
Confidence 85
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0046 Score=56.13 Aligned_cols=76 Identities=20% Similarity=0.193 Sum_probs=58.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHHcCC---cE-EecCCCHHHHHHhcCCccEEEEcC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEAIERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~-g~-~Vi~~~~~~~~~~~~~~~~g~---~~-v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
.+.+|||+|+ |.+|...++.+... |. +|++++++..+..++.+++.. .. ..|..+.+.+.++..++|+||.++
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A 99 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA 99 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence 5688999997 99999999888877 97 999999987776666555532 22 235566777777778999999999
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
+..
T Consensus 100 a~~ 102 (344)
T 2gn4_A 100 ALK 102 (344)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0049 Score=55.68 Aligned_cols=89 Identities=17% Similarity=0.182 Sum_probs=68.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.|.+|.|+|.|.+|...++.++.+|.+|++.++..++. ..+++|+.. .+ +.++....|+|+.++....
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~----~~---l~ell~~aDvV~l~~P~t~~t 233 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE--VSASFGVQQ----LP---LEEIWPLCDFITVHTPLLPST 233 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH--HHHHTTCEE----CC---HHHHGGGCSEEEECCCCCTTT
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hhhhcCcee----CC---HHHHHhcCCEEEEecCCCHHH
Confidence 368899999999999999999999999999999876552 335777642 12 3344557999999877643
Q ss_pred --cH-HHHHHhhccCCEEEEecC
Q 018094 260 --PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..|++++.+++++.
T Consensus 234 ~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 234 TGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp TTSBCHHHHTTSCTTEEEEECSC
T ss_pred HHhhCHHHHhhCCCCcEEEECCC
Confidence 12 457788999999999986
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0038 Score=55.87 Aligned_cols=89 Identities=24% Similarity=0.337 Sum_probs=67.3
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++. . .+++|+.. .+. .++....|+|+.++....
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-~~~~g~~~----~~l---~ell~~aDvVvl~~P~~~~t 210 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-K-AEKINAKA----VSL---EELLKNSDVISLHVTVSKDA 210 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-H-HHHTTCEE----CCH---HHHHHHCSEEEECCCCCTTS
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-H-HHhcCcee----cCH---HHHHhhCCEEEEeccCChHH
Confidence 468899999999999999999999999999999887653 2 35777652 122 223335899999887432
Q ss_pred --cH-HHHHHhhccCCEEEEecC
Q 018094 260 --PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..+++++.+++++.
T Consensus 211 ~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 211 KPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CCSBCHHHHHHSCTTEEEEESSC
T ss_pred HHhhCHHHHhcCCCCCEEEECCC
Confidence 12 456788999999999875
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.011 Score=46.67 Aligned_cols=93 Identities=25% Similarity=0.174 Sum_probs=61.9
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHHc--CCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCc
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAIERL--GADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAV 258 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~~~~--g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~ 258 (361)
.++++|.|+|.+|...++.+...|.+|+++++++ ++...+.+.+ |...+. |..+.+.+.+. ..++|+|+-+++..
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 4679999999999999999999999999999974 4443443333 444332 33445555554 46899999999876
Q ss_pred ccHHH----HHHhhccCCEEEEe
Q 018094 259 HPLMP----LIGLLKSQGKLVLV 277 (361)
Q Consensus 259 ~~~~~----~~~~l~~~G~~v~~ 277 (361)
. .+. ..+.+.+..+++..
T Consensus 83 ~-~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 83 A-DNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp H-HHHHHHHHHHHHTSSSCEEEE
T ss_pred H-HHHHHHHHHHHHCCCCEEEEE
Confidence 4 332 22333344566654
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0029 Score=55.18 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=65.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.+ +++|+|+|.+|.+.+..+...|++|++..++.++..+++++++.. + .+ ..+. ..+|+|+.+++.....
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~--~~---~~~~-~~~Divi~~tp~~~~~~ 186 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A--VP---LEKA-REARLLVNATRVGLEDP 186 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E--CC---GGGG-GGCSEEEECSSTTTTCT
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h--hh---Hhhc-cCCCEEEEccCCCCCCC
Confidence 56 899999999999999999999999999998888777777788764 2 12 1233 5699999999876210
Q ss_pred --HH-HHHhhccCCEEEEecC
Q 018094 262 --MP-LIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 --~~-~~~~l~~~G~~v~~g~ 279 (361)
.. ....++++..+++++.
T Consensus 187 ~~~~l~~~~l~~g~~viD~~~ 207 (263)
T 2d5c_A 187 SASPLPAELFPEEGAAVDLVY 207 (263)
T ss_dssp TCCSSCGGGSCSSSEEEESCC
T ss_pred CCCCCCHHHcCCCCEEEEeec
Confidence 00 1456777777878764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.013 Score=50.50 Aligned_cols=72 Identities=17% Similarity=0.201 Sum_probs=50.4
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecC-CCHHHHHHhcCCccEEEEcCCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVS-RDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~-~~~~~~~~~~~g~d~vid~~g~ 257 (361)
-.++++||.|+ |.+|...++.+...|++|++++++.+. .++++...+ .|- .+.+.+.+...++|++|+++|.
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~ 91 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG 91 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence 46789999998 999999999999999999999987633 244552222 232 1222222323489999999985
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.01 Score=51.57 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++. -.... ..|-.+.+.+.++ .+++|++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE------AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS------CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC------CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999997 9999999999999999999999876541 11221 2355555444332 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 81 ~Ag~ 84 (264)
T 2dtx_A 81 NAGI 84 (264)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0044 Score=53.86 Aligned_cols=75 Identities=21% Similarity=0.295 Sum_probs=54.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHhc--------CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM--------GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~--------~g 247 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++. ++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999997 99999999999999999999999877655544433 4322 23445544433332 67
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 93 id~li~~Ag~ 102 (266)
T 1xq1_A 93 LDILINNLGA 102 (266)
T ss_dssp CSEEEEECCC
T ss_pred CcEEEECCCC
Confidence 9999999885
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.003 Score=55.60 Aligned_cols=75 Identities=24% Similarity=0.336 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC---cE---EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~---~~---v~~~~~~~~~~~~-------~ 245 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+..+++ +. .. ..|-.+.+.+.++ .
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5789999997 99999999999999999999999987766555543 32 11 1244555443332 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++++++|.
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999986
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.003 Score=54.47 Aligned_cols=73 Identities=21% Similarity=0.297 Sum_probs=55.4
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHhc-------CCccEEEE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAAM-------GTMDGIID 253 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~~-------~g~d~vid 253 (361)
+++||.|+ |.+|.+.++.+...|++|++++++.++..++.++++... ..|-.+.+.+.++. +++|++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 36889997 999999999999999999999999887777766665432 23555555554432 37999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 81 nAg~ 84 (248)
T 3asu_A 81 NAGL 84 (248)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9985
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0045 Score=53.87 Aligned_cols=71 Identities=15% Similarity=0.171 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHH-------hcCCccEEEEc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA-------AMGTMDGIIDT 254 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-------~~~g~d~vid~ 254 (361)
+|+++||.|+ +++|++.++.+...|++|+++.++.++. ..+.+ ....|-.+++.+.+ ..+++|+++++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnn 85 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVHM 85 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEEC
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 7899999997 9999999999999999999999875431 11111 12234455443332 23579999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 86 AG~ 88 (261)
T 4h15_A 86 LGG 88 (261)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0097 Score=52.34 Aligned_cols=75 Identities=13% Similarity=0.214 Sum_probs=51.9
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCC-cE-EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGA-DS-FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~-~~-v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.+ ...++.++.+. .. ..|-.+.+.+.++ .++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999985 69999999999999999999998864 23333333342 22 2355555444332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 100 iD~lv~~Ag~ 109 (285)
T 2p91_A 100 LDIIVHSIAY 109 (285)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0046 Score=54.17 Aligned_cols=75 Identities=21% Similarity=0.319 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+ +.+... ..|-.+.+.+.++ .+++
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 112 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI 112 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4688999997 999999999888889999999988765444332 234322 1344555444332 2469
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++|.++|.
T Consensus 113 d~li~~Ag~ 121 (279)
T 3ctm_A 113 DVFVANAGV 121 (279)
T ss_dssp SEEEECGGG
T ss_pred CEEEECCcc
Confidence 999999874
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0041 Score=56.54 Aligned_cols=91 Identities=20% Similarity=0.220 Sum_probs=67.8
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 258 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~--- 258 (361)
-.|.+|.|+|.|.+|...++.++.+|.+|++.+++...... .+++|...+ . .+.++....|+|+-++...
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-~~~~g~~~~---~---~l~ell~~aDvV~l~~Plt~~t 234 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPEL-EKETGAKFV---E---DLNEMLPKCDVIVINMPLTEKT 234 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHH-HHHHCCEEC---S---CHHHHGGGCSEEEECSCCCTTT
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHH-HHhCCCeEc---C---CHHHHHhcCCEEEECCCCCHHH
Confidence 36889999999999999999999999999999887544333 356676432 1 2334555789999987743
Q ss_pred --ccHHHHHHhhccCCEEEEecC
Q 018094 259 --HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 --~~~~~~~~~l~~~G~~v~~g~ 279 (361)
..-...+..|+++..+++++.
T Consensus 235 ~~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 235 RGMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp TTCBSHHHHHHSCTTEEEEECSC
T ss_pred HHhhcHHHHhcCCCCCEEEECcC
Confidence 112467788999999999975
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.003 Score=55.57 Aligned_cols=75 Identities=19% Similarity=0.319 Sum_probs=54.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC---cE---EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---DS---FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~---~~---v~~~~~~~~~~~~-------~ 245 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +. .. ..|-.+.+.+.++ .
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4678999997 99999999999999999999999887766554443 22 21 1355555443332 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++|+++|.
T Consensus 85 g~iD~lv~nAg~ 96 (280)
T 1xkq_A 85 GKIDVLVNNAGA 96 (280)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999984
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0073 Score=52.04 Aligned_cols=70 Identities=19% Similarity=0.271 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++++||.|+ |.+|...++.+...|++|++++++.+. ++.+... ..|..+.+.+.++ .+++|++|+
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999998 999999999999999999999987652 2234322 2355555444333 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 81 ~Ag~ 84 (250)
T 2fwm_X 81 AAGI 84 (250)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9985
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.015 Score=52.98 Aligned_cols=88 Identities=15% Similarity=0.307 Sum_probs=65.0
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|++|.|+|.|.+|...++.++.+|.+|++.++.... +..++.|+.. .+ +.++....|+|+-++....
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~--~~~~~~g~~~----~~---l~ell~~aDvV~l~~Plt~~T~ 245 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR--SMLEENGVEP----AS---LEDVLTKSDFIFVVAAVTSENK 245 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH--HHHHHTTCEE----CC---HHHHHHSCSEEEECSCSSCC--
T ss_pred CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH--HHHhhcCeee----CC---HHHHHhcCCEEEEcCcCCHHHH
Confidence 4889999999999999999999999999999887532 2234567542 12 2344456899998766432
Q ss_pred -c-HHHHHHhhccCCEEEEecC
Q 018094 260 -P-LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 -~-~~~~~~~l~~~G~~v~~g~ 279 (361)
. -...+..|++++.+++++.
T Consensus 246 ~li~~~~l~~mk~gailIN~aR 267 (365)
T 4hy3_A 246 RFLGAEAFSSMRRGAAFILLSR 267 (365)
T ss_dssp -CCCHHHHHTSCTTCEEEECSC
T ss_pred hhcCHHHHhcCCCCcEEEECcC
Confidence 1 2457788999999999983
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0081 Score=49.86 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=65.6
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHH---HHcCCcE--EecCCCHHHHHHhcCCccEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAI---ERLGADS--FLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~~~g~d~v 251 (361)
...++++++||-+|+|. |..++.+++.. ..+|+.++.+++....+. ++.|.+. ++..+-.+... ..+.+|+|
T Consensus 35 ~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~i 112 (204)
T 3e05_A 35 KLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD-DLPDPDRV 112 (204)
T ss_dssp HTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT-TSCCCSEE
T ss_pred HcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh-cCCCCCEE
Confidence 34468999999999874 88888999886 369999999887654432 2334422 22221111111 11469999
Q ss_pred EEcCCC---cccHHHHHHhhccCCEEEEec
Q 018094 252 IDTVSA---VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 252 id~~g~---~~~~~~~~~~l~~~G~~v~~g 278 (361)
+..... ...+..+.+.|+++|+++...
T Consensus 113 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 113 FIGGSGGMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp EESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 987653 234677888999999999864
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0099 Score=54.02 Aligned_cols=89 Identities=19% Similarity=0.256 Sum_probs=65.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++.... +..++.|...+ .+ +.++....|+|+-++....
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~~---~~---l~ell~~aDiV~l~~Plt~~t~ 230 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK--ERARADGFAVA---ES---KDALFEQSDVLSVHLRLNDETR 230 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH--HHHHHTTCEEC---SS---HHHHHHHCSEEEECCCCSTTTT
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH--HHHHhcCceEe---CC---HHHHHhhCCEEEEeccCcHHHH
Confidence 5889999999999999999999999999999877432 33356676432 12 2233345899999876432
Q ss_pred --cHHHHHHhhccCCEEEEecC
Q 018094 260 --PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~ 279 (361)
.-...+..|+++..+++++.
T Consensus 231 ~li~~~~l~~mk~gailIN~aR 252 (352)
T 3gg9_A 231 SIITVADLTRMKPTALFVNTSR 252 (352)
T ss_dssp TCBCHHHHTTSCTTCEEEECSC
T ss_pred HhhCHHHHhhCCCCcEEEECCC
Confidence 12367788999999999984
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0045 Score=54.12 Aligned_cols=71 Identities=20% Similarity=0.256 Sum_probs=51.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vi 252 (361)
..+++|||.|+ |++|.+.++.+...|++|++++++.++.. . .... ..|-.+.+.+.++ .+++|++|
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 86 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV 86 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57899999997 99999999999999999999998765431 1 1221 2455555444332 24799999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|.
T Consensus 87 ~nAg~ 91 (269)
T 3vtz_A 87 NNAGI 91 (269)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99985
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0035 Score=54.19 Aligned_cols=74 Identities=14% Similarity=0.026 Sum_probs=50.5
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HHcCCcE-EecCCCHH-HHH---HhcCCccEEEEcCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI--ERLGADS-FLVSRDQD-EMQ---AAMGTMDGIIDTVS 256 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~--~~~g~~~-v~~~~~~~-~~~---~~~~g~d~vid~~g 256 (361)
+++||.|+ |.+|...++.+...|++|++++++.++..++. ++.+.+. .++..+-+ .+. +..+++|++|+++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg 81 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI 81 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence 46899997 99999999999999999999998876654442 2334332 22333322 222 22358999999998
Q ss_pred Cc
Q 018094 257 AV 258 (361)
Q Consensus 257 ~~ 258 (361)
..
T Consensus 82 ~~ 83 (254)
T 1zmt_A 82 FA 83 (254)
T ss_dssp CC
T ss_pred cC
Confidence 54
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0052 Score=54.47 Aligned_cols=75 Identities=20% Similarity=0.278 Sum_probs=54.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+.
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 5688999998 99999999999999999999999887665554443 4322 1344555443332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 105 id~li~~Ag~ 114 (302)
T 1w6u_A 105 PNIVINNAAG 114 (302)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999999984
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0019 Score=55.82 Aligned_cols=89 Identities=16% Similarity=0.205 Sum_probs=59.1
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc----CCccEEEEcCCCcc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVH 259 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~g~d~vid~~g~~~ 259 (361)
+++||.|+ |.+|...++.+...|++|++++++.++... ....|-.+.+.+.++. +++|++|+++|...
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 46899998 999999999999999999999987654311 1011222233344332 46799999998643
Q ss_pred ------------------cHHHHHHhhccC--CEEEEecCC
Q 018094 260 ------------------PLMPLIGLLKSQ--GKLVLVGAP 280 (361)
Q Consensus 260 ------------------~~~~~~~~l~~~--G~~v~~g~~ 280 (361)
..+.++..++.. |+++.++..
T Consensus 75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~ 115 (257)
T 1fjh_A 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV 115 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence 123344444433 899999764
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0036 Score=54.86 Aligned_cols=94 Identities=15% Similarity=0.200 Sum_probs=64.8
Q ss_pred EEEEEcc-chHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV--- 258 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~--- 258 (361)
+|||+|+ |.+|...++.+... |.+|++++++.++...+ ...+...+ .|..+.+.+.++..++|+||.+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~ 79 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL-AAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ 79 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh-hcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence 4899998 99999999988887 89999999987765444 33354432 35566777777778999999998752
Q ss_pred --ccHHHHHHhhccC--CEEEEecCC
Q 018094 259 --HPLMPLIGLLKSQ--GKLVLVGAP 280 (361)
Q Consensus 259 --~~~~~~~~~l~~~--G~~v~~g~~ 280 (361)
......++.++.. ++++.++..
T Consensus 80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~ 105 (286)
T 2zcu_A 80 RAPQHRNVINAAKAAGVKFIAYTSLL 105 (286)
T ss_dssp --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 1233445544432 588887653
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0067 Score=52.06 Aligned_cols=76 Identities=17% Similarity=0.180 Sum_probs=55.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .+++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999997 99999999999999999999999987665554433 4332 1344555443332 2479
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|.++|..
T Consensus 84 d~li~~Ag~~ 93 (247)
T 3lyl_A 84 DILVNNAGIT 93 (247)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999863
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0021 Score=56.44 Aligned_cols=101 Identities=19% Similarity=0.121 Sum_probs=66.8
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cE-EecCCCHHHHHHhc-CCc
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS-FLVSRDQDEMQAAM-GTM 248 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~-v~~~~~~~~~~~~~-~g~ 248 (361)
.+|+....--.+++++|+|+|.+|.+++..+...|.+|+++.++.++.++++++++. .. ..+. .++. +.+
T Consensus 108 ~~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~~~~~~~ 181 (272)
T 1p77_A 108 TDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM------DSIPLQTY 181 (272)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCCCSCC
T ss_pred HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH------HHhccCCC
Confidence 345443322367899999999999999999999999999999998888788777653 11 1111 1222 479
Q ss_pred cEEEEcCCCcccHH---HHHHhhccCCEEEEecC
Q 018094 249 DGIIDTVSAVHPLM---PLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 249 d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g~ 279 (361)
|++|++++....-. .....++++..++++.-
T Consensus 182 DivIn~t~~~~~~~~~~i~~~~l~~~~~v~D~~y 215 (272)
T 1p77_A 182 DLVINATSAGLSGGTASVDAEILKLGSAFYDMQY 215 (272)
T ss_dssp SEEEECCCC-------CCCHHHHHHCSCEEESCC
T ss_pred CEEEECCCCCCCCCCCCCCHHHcCCCCEEEEeeC
Confidence 99999998754211 01234566677777754
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=96.75 E-value=0.003 Score=55.47 Aligned_cols=94 Identities=13% Similarity=0.176 Sum_probs=66.2
Q ss_pred EEEEEcc-chHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
+|||+|+ |.+|...++.+... |.+|++++++.++..++ ...+...+ .|..+.+.+.++..++|+||.+++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL-ADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH-hhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 5899998 99999999988887 89999999987765444 33344432 355667777777778999999988521
Q ss_pred -----cHHHHHHhhccC--CEEEEecCC
Q 018094 260 -----PLMPLIGLLKSQ--GKLVLVGAP 280 (361)
Q Consensus 260 -----~~~~~~~~l~~~--G~~v~~g~~ 280 (361)
.....++.++.. ++++.++..
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~ 108 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYA 108 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 123344444444 488887653
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0082 Score=52.35 Aligned_cols=76 Identities=21% Similarity=0.256 Sum_probs=50.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
..++++||.|+ |++|...++.+...|++|+++.+. .+......++ .+... ..|-.+.+.+.++ .+
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35678999997 999999999999999999999844 3333333222 23321 2355555443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 103 ~id~li~nAg~ 113 (269)
T 3gk3_A 103 KVDVLINNAGI 113 (269)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999985
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0073 Score=51.67 Aligned_cols=73 Identities=23% Similarity=0.153 Sum_probs=54.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
.+.+|||+|+ |.+|...++.+... |.+|++++++.++..++ .-+... ..|..+.+.+.++..++|+||.++|.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 4678999997 99999999999888 78999999986654322 112332 23556667777777889999999874
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0032 Score=54.30 Aligned_cols=70 Identities=21% Similarity=0.238 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHh-------cCCccEEEEc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT 254 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-------~~g~d~vid~ 254 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++. + ...|-.+.+.+.++ .+++|++|++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4688999997 99999999999999999999998766543220 1 23455555443332 2479999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 89 Ag~ 91 (247)
T 1uzm_A 89 AGL 91 (247)
T ss_dssp CSC
T ss_pred CCC
Confidence 985
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0029 Score=54.06 Aligned_cols=98 Identities=30% Similarity=0.296 Sum_probs=66.4
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEE-ecCCCHHHHHHhcCCccEEEEcC
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
.++++++||.+|+| .|..++.+++..+.+|+.++.+++....+.+ +.|...+ +...+.........++|+|+.+.
T Consensus 88 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 88 NLKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp TCCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred CCCCCCEEEEEeCC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECC
Confidence 46889999999998 7888889998876899999988765443322 3444222 11222110001112599999887
Q ss_pred CCcccHHHHHHhhccCCEEEEec
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g 278 (361)
........+.+.|+++|+++..-
T Consensus 167 ~~~~~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 167 GAPKIPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp BBSSCCHHHHHTEEEEEEEEEEE
T ss_pred cHHHHHHHHHHhcCCCcEEEEEE
Confidence 76666778899999999987653
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.03 Score=50.69 Aligned_cols=132 Identities=17% Similarity=0.185 Sum_probs=83.3
Q ss_pred CEEEEEccchHHHHHHHHHH-HC-CCeEEEE-eCCchhHHHHHHHcCCcEEecCCCHHHHHHhc-CCccEEEEcCCCccc
Q 018094 185 MHVGVVGLGGLGHVAVKFAK-AM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP 260 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~-~~-g~~Vi~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~g~d~vid~~g~~~~ 260 (361)
-+|.|+|+|.+|...++.++ .. +++++.+ +++.++..++.+++|...+++ +.+.+ +. .++|+|+.++.....
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~~~~~--l~~~~~D~V~i~tp~~~h 84 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--NYKDM--IDTENIDAIFIVAPTPFH 84 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--CHHHH--HTTSCCSEEEECSCGGGH
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--CHHHH--hcCCCCCEEEEeCChHhH
Confidence 46899999999998888877 43 6776655 455556666777788754432 32221 22 379999999998765
Q ss_pred HHHHHHhhccCCEEEEecCCCCCcccChHH---H----hhC-CcEEE-ecccCCHHHHHHHHHHHHcCCCcee
Q 018094 261 LMPLIGLLKSQGKLVLVGAPEKPLELPAFS---L----LMG-RKIVG-GSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~-~~~i~-g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
...+..+++.+ +-+.+.. +...+... + -.+ ++.+. +........+..+.+++.+|.+-..
T Consensus 85 ~~~~~~al~~G-~~v~~eK---p~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i 153 (346)
T 3cea_A 85 PEMTIYAMNAG-LNVFCEK---PLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKI 153 (346)
T ss_dssp HHHHHHHHHTT-CEEEECS---CCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTTCSE
T ss_pred HHHHHHHHHCC-CEEEEcC---CCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCCCCe
Confidence 67777777765 5555532 22222221 2 234 55554 3333333458888999999987644
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0074 Score=52.31 Aligned_cols=74 Identities=16% Similarity=0.219 Sum_probs=53.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHH----h----cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA----A----MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~----~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.+ . .++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 99999999999999999999999877665554443 4322 134455443322 2 357
Q ss_pred ccEEEEcCC
Q 018094 248 MDGIIDTVS 256 (361)
Q Consensus 248 ~d~vid~~g 256 (361)
+|++|+++|
T Consensus 84 id~lvnnAg 92 (260)
T 2qq5_A 84 LDVLVNNAY 92 (260)
T ss_dssp CCEEEECCC
T ss_pred ceEEEECCc
Confidence 899999995
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0096 Score=58.36 Aligned_cols=97 Identities=18% Similarity=0.202 Sum_probs=63.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHH---HcCCcEEecCCCHH----HHH---
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIE---RLGADSFLVSRDQD----EMQ--- 242 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~---------~~~~~~~~---~~g~~~v~~~~~~~----~~~--- 242 (361)
.++++||.|+ +++|.+.++.+...|++|++.+++. ++..++.+ +.|...+.+..+.+ .+.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 4688999997 8999999999999999999987653 33333333 33555555554432 222
Q ss_pred HhcCCccEEEEcCCCcc-------------------------cHHHHHHhhc--cCCEEEEecC
Q 018094 243 AAMGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGA 279 (361)
Q Consensus 243 ~~~~g~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~ 279 (361)
+..+++|++++++|... ..+.++..|+ .+|++|.+++
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS 150 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS 150 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 22357999999998521 1233455553 3589999976
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0035 Score=56.49 Aligned_cols=77 Identities=22% Similarity=0.151 Sum_probs=55.2
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----C--CcEE--ecCCCHHHHHHhcCCccEEE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----G--ADSF--LVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g--~~~v--~~~~~~~~~~~~~~g~d~vi 252 (361)
.++.+|||+|+ |.+|...+..+...|.+|++++++.++...+.+.+ + ...+ .|..+.+.+.++..++|+||
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 45789999998 99999999999889999999999876654443222 2 2222 24444445555556899999
Q ss_pred EcCCCc
Q 018094 253 DTVSAV 258 (361)
Q Consensus 253 d~~g~~ 258 (361)
.+++..
T Consensus 89 h~A~~~ 94 (342)
T 1y1p_A 89 HIASVV 94 (342)
T ss_dssp ECCCCC
T ss_pred EeCCCC
Confidence 998853
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0093 Score=51.10 Aligned_cols=76 Identities=21% Similarity=0.375 Sum_probs=54.4
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---C-C-cEE--ecC--CCHHHHHHh-------
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---G-A-DSF--LVS--RDQDEMQAA------- 244 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g-~-~~v--~~~--~~~~~~~~~------- 244 (361)
-.++++||.|+ |.+|...+..+...|++|++++++.++..++.+++ + . ..+ ++. .+.+.+.++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 35789999997 99999999999999999999999988766554443 2 1 112 222 444333322
Q ss_pred cCCccEEEEcCCC
Q 018094 245 MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ~~g~d~vid~~g~ 257 (361)
.+++|++|.++|.
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2479999999985
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0056 Score=60.19 Aligned_cols=76 Identities=18% Similarity=0.241 Sum_probs=48.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC---------CchhHHHHH---HHcCCcEEecCCCHHHHHHhc----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST---------SPSKKSEAI---ERLGADSFLVSRDQDEMQAAM---- 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~---------~~~~~~~~~---~~~g~~~v~~~~~~~~~~~~~---- 245 (361)
.|+++||.|+ +++|.+.+..+...|++|+++++ +.++..++. ++.+...+.|..+.+.+.++.
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~ 97 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI 97 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence 5788999997 99999999999999999999876 433333333 334556666666654433332
Q ss_pred ---CCccEEEEcCCCc
Q 018094 246 ---GTMDGIIDTVSAV 258 (361)
Q Consensus 246 ---~g~d~vid~~g~~ 258 (361)
+++|++|+++|..
T Consensus 98 ~~~g~iDiLVnnAGi~ 113 (613)
T 3oml_A 98 KAFGRVDILVNNAGIL 113 (613)
T ss_dssp -------CEECCCCCC
T ss_pred HHCCCCcEEEECCCCC
Confidence 3699999999863
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0044 Score=53.32 Aligned_cols=74 Identities=16% Similarity=0.199 Sum_probs=54.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcE-EecCCCHHHHHHh---cCCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAA---MGTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~---~~g~d~vid~~g 256 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++. ++. ... ..|-.+.+.+.+. .+++|++|+++|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 4688999997 99999999999999999999999876654443 332 111 2355555555443 357999999998
Q ss_pred C
Q 018094 257 A 257 (361)
Q Consensus 257 ~ 257 (361)
.
T Consensus 84 ~ 84 (246)
T 2ag5_A 84 F 84 (246)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0065 Score=53.51 Aligned_cols=75 Identities=27% Similarity=0.325 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE----EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS----FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~----v~~~~~~~~~~~~-------~~g 247 (361)
.++++||+|+ |.+|...++.+...|++|++++++.++..++.++ .+... ..|-.+.+.+.++ .++
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999999999999999999998776554333 34321 1344554433332 248
Q ss_pred ccEEEEc-CCC
Q 018094 248 MDGIIDT-VSA 257 (361)
Q Consensus 248 ~d~vid~-~g~ 257 (361)
+|++|.+ +|.
T Consensus 107 iD~li~naag~ 117 (286)
T 1xu9_A 107 LDMLILNHITN 117 (286)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEECCccC
Confidence 9999998 453
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.011 Score=49.90 Aligned_cols=74 Identities=12% Similarity=0.061 Sum_probs=58.4
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 259 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~~ 259 (361)
+|+|+|+|.+|...++.+...|.+|+++++++++..++.++++...+. |..+.+.+.+. ..++|+++-+++...
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH
Confidence 488999999999999999999999999999988877766666765433 33445555554 358999999998875
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.014 Score=50.96 Aligned_cols=76 Identities=18% Similarity=0.314 Sum_probs=51.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHH---HcCCcEE---ecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIE---RLGADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
..++++||.|+ |.+|.+.++.+...|++|+++ .++.++..++.+ +.+.... .|-.+.+.+.++ .+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 45788999997 999999999999999999887 555554444333 2343221 244554443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 104 ~id~li~nAg~ 114 (272)
T 4e3z_A 104 RLDGLVNNAGI 114 (272)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999885
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0038 Score=53.90 Aligned_cols=98 Identities=15% Similarity=0.228 Sum_probs=61.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHH---cCCcEE---ecCCCHHHHHHhc---------
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAIER---LGADSF---LVSRDQDEMQAAM--------- 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~~--------- 245 (361)
.++++||.|+ +++|.+.++.+...|++|+++ .++.++..+..++ .+.... .|-.+.+.+.+..
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 5789999997 999999999999999999886 4444444444333 333221 2334443322221
Q ss_pred ----CCccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 246 ----GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 246 ----~g~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+.+|++|+++|... ..+.++..++++|+++.++..
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~ 149 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 149 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCCh
Confidence 23999999998631 011233344567899999764
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0068 Score=52.62 Aligned_cols=75 Identities=15% Similarity=0.136 Sum_probs=51.4
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHhc------
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAAM------ 245 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g---~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~~------ 245 (361)
..++++||+|+ |.+|...++.+...| ++|++++++.++...+ +++ +... ..|-.+.+.+.++.
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence 35678999997 999999999999999 9999999987654332 222 3221 13444444333322
Q ss_pred -C--CccEEEEcCCC
Q 018094 246 -G--TMDGIIDTVSA 257 (361)
Q Consensus 246 -~--g~d~vid~~g~ 257 (361)
+ ++|++|.++|.
T Consensus 98 ~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 98 TKDQGLNVLFNNAGI 112 (267)
T ss_dssp HGGGCCSEEEECCCC
T ss_pred cCCCCccEEEECCCc
Confidence 2 69999999985
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0061 Score=55.58 Aligned_cols=111 Identities=17% Similarity=0.193 Sum_probs=73.3
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC----chh----H----HHHHHHcCCcEE
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS----PSK----K----SEAIERLGADSF 232 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~----~~~----~----~~~~~~~g~~~v 232 (361)
+...+.+.+++..+.--+..+|+|+|+|..|..+++++..+|+ +|+++++. .++ . .+++++...
T Consensus 174 V~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~--- 250 (388)
T 1vl6_A 174 VVSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP--- 250 (388)
T ss_dssp HHHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---
T ss_pred HHHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---
Confidence 3344445566655532367889999999999999999999999 89999987 544 2 233333221
Q ss_pred ecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 233 LVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 233 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
......+.+...++|++|-+++....-+..++.|+++-.++.+..+.
T Consensus 251 --~~~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSNPt 297 (388)
T 1vl6_A 251 --ERLSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALANPV 297 (388)
T ss_dssp --TCCCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCSSS
T ss_pred --cCchhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCCCC
Confidence 11223345555678999988874444567778888777666665443
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0042 Score=55.16 Aligned_cols=75 Identities=21% Similarity=0.291 Sum_probs=54.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--------CCcE---EecCCCHHHHHHh------
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GADS---FLVSRDQDEMQAA------ 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~--------g~~~---v~~~~~~~~~~~~------ 244 (361)
.++++||.|+ |.+|...++.+...|++|++++++.++..++.+++ +... ..|-.+.+.+.++
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 4688999998 99999999999999999999999877665554443 3221 1344555444332
Q ss_pred -cCCccEEEEcCCC
Q 018094 245 -MGTMDGIIDTVSA 257 (361)
Q Consensus 245 -~~g~d~vid~~g~ 257 (361)
.+++|++|.++|.
T Consensus 97 ~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 97 TFGKINFLVNNGGG 110 (303)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 2479999999983
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.004 Score=56.99 Aligned_cols=91 Identities=16% Similarity=0.198 Sum_probs=66.9
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-- 258 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~-- 258 (361)
-.|.+|.|+|.|.+|...++.++.+|++ |++.+++..+.. ..+++|+..+ .+ +.++....|+|+.++...
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~-~~~~~g~~~~---~~---l~ell~~aDvV~l~~P~t~~ 234 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKD-AEEKVGARRV---EN---IEELVAQADIVTVNAPLHAG 234 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHH-HHHHTTEEEC---SS---HHHHHHTCSEEEECCCCSTT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchh-HHHhcCcEec---CC---HHHHHhcCCEEEECCCCChH
Confidence 3688999999999999999999999997 999987765443 3356775421 12 223334689999988764
Q ss_pred --ccH-HHHHHhhccCCEEEEecC
Q 018094 259 --HPL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 --~~~-~~~~~~l~~~G~~v~~g~ 279 (361)
+.+ ...+..|++++.+++++.
T Consensus 235 t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 235 TKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp TTTCBCHHHHTTSCTTEEEEECSC
T ss_pred HHHHhCHHHHhhCCCCCEEEECCC
Confidence 222 356788999999999875
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0041 Score=51.56 Aligned_cols=60 Identities=17% Similarity=0.297 Sum_probs=44.8
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc---CCccEEEEcCCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM---GTMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---~g~d~vid~~g~ 257 (361)
++||.|+ |.+|...++.+. .|++|++++++.+ ....|..+.+.+.++. +++|++|.++|.
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~ 68 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS 68 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 6999998 999999999988 8999999988753 1223445555444432 468999999884
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.62 E-value=0.014 Score=54.32 Aligned_cols=95 Identities=17% Similarity=0.347 Sum_probs=69.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCccc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVHP 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~~~ 260 (361)
.+++|+|+|.|.+|+..++.++..|..|++++.+.++...+ +++|...++ |..+.+.+.++ ...+|+++-+++....
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~-~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~ 81 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT 81 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH-HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence 34679999999999999999999999999999998887665 677876543 44555656555 3489999999998652
Q ss_pred HHH---HHHhhccCCEEEEec
Q 018094 261 LMP---LIGLLKSQGKLVLVG 278 (361)
Q Consensus 261 ~~~---~~~~l~~~G~~v~~g 278 (361)
-.. ..+.+.+.-+++.-.
T Consensus 82 n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 82 NLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp HHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEE
Confidence 222 333455666776654
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0054 Score=53.91 Aligned_cols=76 Identities=21% Similarity=0.266 Sum_probs=52.2
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHH---cCCcEE---ecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
..++++||.|+ |.+|.+.++.+...|++|+++++ +.++..++.++ .+.... .|-.+.+.+.++ .+
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35789999997 99999999999999999999985 54444444333 343321 244454433322 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 107 ~iD~lvnnAg~ 117 (280)
T 4da9_A 107 RIDCLVNNAGI 117 (280)
T ss_dssp CCCEEEEECC-
T ss_pred CCCEEEECCCc
Confidence 79999999986
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.61 E-value=0.01 Score=52.71 Aligned_cols=101 Identities=15% Similarity=0.098 Sum_probs=68.3
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCc--EEecCCCHHHHHHhcCCcc
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~g~d 249 (361)
+.....++++++||-+|+|. |..+..+++..|.+|+.++.+++....+.+ +.|.. .-+...+... +.+.+|
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~fD 139 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE---FDEPVD 139 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG---CCCCCS
T ss_pred HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH---cCCCcc
Confidence 33444578999999999875 888889999888999999998776544322 33432 1122222222 256799
Q ss_pred EEEEcCCCc---------------ccHHHHHHhhccCCEEEEecC
Q 018094 250 GIIDTVSAV---------------HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 250 ~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~ 279 (361)
+|+....-. ..+..+.+.|+|+|+++....
T Consensus 140 ~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 140 RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 999754322 236678889999999997754
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0093 Score=51.56 Aligned_cols=69 Identities=19% Similarity=0.166 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++++||.|+ |.+|.+.++.+...|++|++++++.++..+ ... ..|-.+.+.+.++ .+++|++|+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4688999998 999999999999999999999987654321 211 2355555443332 246899999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 94 nAg~ 97 (253)
T 2nm0_A 94 NAGV 97 (253)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 9885
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0043 Score=53.29 Aligned_cols=73 Identities=15% Similarity=0.083 Sum_probs=52.4
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEE-e--CCchhHHHHHHHc-CCcEEecCCCHH-HHHHh---cCCccEEEEc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-S--TSPSKKSEAIERL-GADSFLVSRDQD-EMQAA---MGTMDGIIDT 254 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~-~--~~~~~~~~~~~~~-g~~~v~~~~~~~-~~~~~---~~g~d~vid~ 254 (361)
++++||.|+ |.+|.+.++.+...|++|+++ . ++.++..++.+++ +. .+.+..+-+ .+.+. .+++|++|++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~g~iD~lv~~ 79 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHGEAIDTIVSN 79 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 467999997 999999999999999999998 5 8877766666665 32 233433322 23332 3479999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+|.
T Consensus 80 Ag~ 82 (244)
T 1zmo_A 80 DYI 82 (244)
T ss_dssp CCC
T ss_pred CCc
Confidence 984
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0041 Score=52.76 Aligned_cols=97 Identities=20% Similarity=0.222 Sum_probs=64.8
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHH---HcC-----C-cEEecCCCHHHHHH
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSPSKKSEAIE---RLG-----A-DSFLVSRDQDEMQA 243 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g-------~~Vi~~~~~~~~~~~~~~---~~g-----~-~~v~~~~~~~~~~~ 243 (361)
.++++++||-+|+|. |..+..+++..+ .+|+.++.+++....+.+ +.+ . ...+...+......
T Consensus 81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 159 (227)
T 1r18_A 81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP 159 (227)
T ss_dssp TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG
T ss_pred hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC
Confidence 468899999999875 888888888766 499999988765443322 222 1 11111122111001
Q ss_pred hcCCccEEEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 244 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 244 ~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
..+.+|+|+...........+.+.|+++|+++..
T Consensus 160 ~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP 193 (227)
T ss_dssp GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence 1247999999888777778899999999998865
|
| >1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0062 Score=54.75 Aligned_cols=101 Identities=14% Similarity=0.179 Sum_probs=68.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
+...+++|+|+|.+|...+..+.. .+. +|.+..++.++.++++++++.. .+. ..+ ..+.. ++|+|+.|+..
T Consensus 123 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~---~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQP---AEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECC---HHHHT-SSSEEEECCCC
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECC---HHHHh-CCCEEEEeeCC
Confidence 567789999999999988776665 455 8888888888888887776521 122 222 33344 79999999887
Q ss_pred cccHHHHHHhhccCCEEEEecCCCCC-cccCh
Q 018094 258 VHPLMPLIGLLKSQGKLVLVGAPEKP-LELPA 288 (361)
Q Consensus 258 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~ 288 (361)
...+- ....++++-.++.+|..... ..++.
T Consensus 198 ~~pv~-~~~~l~~G~~V~~ig~~~p~~~el~~ 228 (322)
T 1omo_A 198 RKPVV-KAEWVEEGTHINAIGADGPGKQELDV 228 (322)
T ss_dssp SSCCB-CGGGCCTTCEEEECSCCSTTCCCBCH
T ss_pred CCcee-cHHHcCCCeEEEECCCCCCCccccCH
Confidence 54221 12568888888888766543 34443
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.005 Score=52.05 Aligned_cols=97 Identities=26% Similarity=0.224 Sum_probs=64.8
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---HcC-----C-cEEecCCCHHHHHHhcCCcc
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLG-----A-DSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~---~~g-----~-~~v~~~~~~~~~~~~~~g~d 249 (361)
++++++||-+|+|. |..+..+++..| .+|+.++.++.....+.+ +.+ . ...+...+........+.+|
T Consensus 75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence 67899999999875 777888888765 589999988765543322 222 1 11111222111111134799
Q ss_pred EEEEcCCCcccHHHHHHhhccCCEEEEec
Q 018094 250 GIIDTVSAVHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 250 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g 278 (361)
+|+........+..+.+.|+++|+++..-
T Consensus 154 ~i~~~~~~~~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 154 AIHVGAAAPVVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred EEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence 99987776666789999999999998763
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.013 Score=51.94 Aligned_cols=92 Identities=16% Similarity=0.194 Sum_probs=63.4
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-------hhHHHH--HHHcCCcEE-ecCCCHHHHHHhcCCccEEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-------SKKSEA--IERLGADSF-LVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-------~~~~~~--~~~~g~~~v-~~~~~~~~~~~~~~g~d~vi 252 (361)
+.+|||+|+ |.+|...+..+...|.+|++++++. ++...+ .+..++..+ .|..+.+.+.++..++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 357999998 9999999998888899999999886 333222 123355433 35666777777778999999
Q ss_pred EcCCCcc--cHHHHHHhhccC---CEEE
Q 018094 253 DTVSAVH--PLMPLIGLLKSQ---GKLV 275 (361)
Q Consensus 253 d~~g~~~--~~~~~~~~l~~~---G~~v 275 (361)
.+++... .....++.++.. .+++
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEe
Confidence 9998642 234455555433 4666
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0096 Score=53.13 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=63.4
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.+|||+|+ |.+|...+..+...|.+|++++++........ +..+++.+ .|..+.+.+.++..++|+||.+++...
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~ 91 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ 91 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence 46999998 99999999999999999999999864222221 23455433 356677777777789999999988532
Q ss_pred --cHHHHHHhhccC---CEEE
Q 018094 260 --PLMPLIGLLKSQ---GKLV 275 (361)
Q Consensus 260 --~~~~~~~~l~~~---G~~v 275 (361)
.....++.++.. ++++
T Consensus 92 ~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 92 ILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp STTHHHHHHHHHHHCCCCEEE
T ss_pred hHHHHHHHHHHHhcCCCCEEE
Confidence 234455555433 4666
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=96.58 E-value=0.007 Score=55.78 Aligned_cols=90 Identities=17% Similarity=0.174 Sum_probs=66.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~---- 258 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++...+.. ..+++|+... .+ +.++....|+|+.++...
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-~~~~~G~~~~---~~---l~ell~~aDvV~l~~Plt~~t~ 262 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPES-VEKELNLTWH---AT---REDMYPVCDVVTLNCPLHPETE 262 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHH-HHHHHTCEEC---SS---HHHHGGGCSEEEECSCCCTTTT
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchh-hHhhcCceec---CC---HHHHHhcCCEEEEecCCchHHH
Confidence 688999999999999999999999999999988765433 3356776431 12 234455789999987743
Q ss_pred ccH-HHHHHhhccCCEEEEecC
Q 018094 259 HPL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 ~~~-~~~~~~l~~~G~~v~~g~ 279 (361)
+.+ ...+..|+++..+++++.
T Consensus 263 ~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 263 HMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp TCBSHHHHTTSCTTEEEEECSC
T ss_pred HHhhHHHHhhCCCCCEEEECCC
Confidence 123 456778899988998875
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0022 Score=54.82 Aligned_cols=91 Identities=24% Similarity=0.266 Sum_probs=60.2
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE--ecCCCHHHHHHh-------c--CCccEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------M--GTMDGI 251 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~--~g~d~v 251 (361)
++++||.|+ |.+|...++.+...|++|++++++.++.. +.... .|..+.+.+.++ . +++|++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 568999997 99999999999999999999998866431 10111 122333332222 2 579999
Q ss_pred EEcCCCc--------c------------------cHHHHHHhhccCCEEEEecCC
Q 018094 252 IDTVSAV--------H------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 252 id~~g~~--------~------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
|+++|.. . ..+.++..++++|+++.++..
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 131 (236)
T 1ooe_A 77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA 131 (236)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECch
Confidence 9999842 1 012344455567899998763
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0032 Score=53.98 Aligned_cols=70 Identities=19% Similarity=0.218 Sum_probs=48.5
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE--ecCCCHHHHHHh-------c--CCcc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAA-------M--GTMD 249 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~--~g~d 249 (361)
..++++||.|+ |.+|...++.+...|++|++++++.++.. +.... .|-.+.+.+.++ . +++|
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD 78 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD 78 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence 45788999997 99999999999999999999998865431 11111 233333333222 2 5799
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 79 ~lv~~Ag~ 86 (241)
T 1dhr_A 79 AILCVAGG 86 (241)
T ss_dssp EEEECCCC
T ss_pred EEEEcccc
Confidence 99999984
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0053 Score=53.95 Aligned_cols=99 Identities=17% Similarity=0.144 Sum_probs=65.8
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccE
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~ 250 (361)
..+|.....--.++++||+|+|++|.+++..+...|+ +|+++.++.++.+++++++. .+.. +.+.+ . .+|+
T Consensus 110 ~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~---~~l~~-l-~~Di 181 (282)
T 3fbt_A 110 GKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISY---DELSN-L-KGDV 181 (282)
T ss_dssp HHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEH---HHHTT-C-CCSE
T ss_pred HHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccH---HHHHh-c-cCCE
Confidence 3445443322468899999999999999999999998 99999999887766655442 2221 22222 2 7999
Q ss_pred EEEcCCCccc-----HHHHHHhhccCCEEEEec
Q 018094 251 IIDTVSAVHP-----LMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~g~~~~-----~~~~~~~l~~~G~~v~~g 278 (361)
||+++..... .......++++..++++.
T Consensus 182 vInaTp~Gm~~~~~~~pi~~~~l~~~~~v~Dlv 214 (282)
T 3fbt_A 182 IINCTPKGMYPKEGESPVDKEVVAKFSSAVDLI 214 (282)
T ss_dssp EEECSSTTSTTSTTCCSSCHHHHTTCSEEEESC
T ss_pred EEECCccCccCCCccCCCCHHHcCCCCEEEEEe
Confidence 9999854210 011344577777777664
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.019 Score=50.93 Aligned_cols=91 Identities=21% Similarity=0.313 Sum_probs=62.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-----hhHHHHH--HHcCCcEE-ecCCCHHHHHHhcCCccEEEEcC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-----SKKSEAI--ERLGADSF-LVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-----~~~~~~~--~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
.+|||+|+ |.+|...+..+...|.+|++++++. ++...+. +..+...+ .|..+.+.+.++..++|+||.++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 84 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL 84 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECC
Confidence 56999998 9999999999998999999999874 2222221 12244332 35566777777778999999998
Q ss_pred CCc------ccHHHHHHhhccCC---EEE
Q 018094 256 SAV------HPLMPLIGLLKSQG---KLV 275 (361)
Q Consensus 256 g~~------~~~~~~~~~l~~~G---~~v 275 (361)
+.. ......++.++..| +++
T Consensus 85 ~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 85 AGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp CCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred ccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 854 22345555555444 676
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.013 Score=52.20 Aligned_cols=92 Identities=12% Similarity=0.191 Sum_probs=63.7
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc------hhHHHH--HHHcCCcEE-ecCCCHHHHHHhcCCccEEEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP------SKKSEA--IERLGADSF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~------~~~~~~--~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
..+|||+|+ |.+|...++.+...|.+|++++++. ++...+ .+..++..+ .|..+.+.+.++..++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 356999998 9999999999988999999999885 222211 123355433 356677777777789999999
Q ss_pred cCCCc--ccHHHHHHhhccC---CEEE
Q 018094 254 TVSAV--HPLMPLIGLLKSQ---GKLV 275 (361)
Q Consensus 254 ~~g~~--~~~~~~~~~l~~~---G~~v 275 (361)
+++.. ......++.++.. ++++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 84 ALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred CCCccchhhHHHHHHHHHHhCCccEEe
Confidence 98853 2234555555443 4776
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.011 Score=51.37 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=52.8
Q ss_pred CCCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHHcCC-c-EEecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK---KSEAIERLGA-D-SFLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~~---~~~~~~~~g~-~-~v~~~~~~~~~~~~-------~~ 246 (361)
..+++|||.|+ |.+|...++.+...|++|++++++... ..++.++.+. . ...|-.+.+.+.++ .+
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 91 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD 91 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57889999984 699999999999999999999887432 2333334443 2 12355555443332 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|+++|.
T Consensus 92 ~id~lv~nAg~ 102 (271)
T 3ek2_A 92 SLDGLVHSIGF 102 (271)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999985
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0038 Score=53.13 Aligned_cols=97 Identities=14% Similarity=0.144 Sum_probs=65.1
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHH---HcCCc--EEecCCC-HHHHHHh--cCCccEE
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRD-QDEMQAA--MGTMDGI 251 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~---~~g~~--~v~~~~~-~~~~~~~--~~g~d~v 251 (361)
..++++||-+|+| .|..+..+++.. +.+|+.++.+++....+.+ +.|.. ..+...+ .+.+... .+.+|+|
T Consensus 52 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 52 MAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp HHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred ccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEE
Confidence 3578899999987 688888999987 5799999988776544322 23542 2222223 2223334 3579999
Q ss_pred EEcCCCc---ccHHHHHHhhccCCEEEEec
Q 018094 252 IDTVSAV---HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 252 id~~g~~---~~~~~~~~~l~~~G~~v~~g 278 (361)
|...... ..+..+.+.|+++|.++...
T Consensus 131 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 131 FIDAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred EECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 9766542 33567888899999998763
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0092 Score=52.22 Aligned_cols=75 Identities=15% Similarity=0.237 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh------cCCcc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA------MGTMD 249 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~------~~g~d 249 (361)
.++++||.|+ |++|.+.++.+...|++|+++++. ++..+..+++ +... ..|-.+.+.+.++ .+++|
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 5789999997 999999999999999999999955 3333443433 3322 2344555443332 24799
Q ss_pred EEEEcCCCc
Q 018094 250 GIIDTVSAV 258 (361)
Q Consensus 250 ~vid~~g~~ 258 (361)
++|+++|..
T Consensus 109 ~lv~nAg~~ 117 (273)
T 3uf0_A 109 VLVNNAGII 117 (273)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999999863
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0038 Score=54.48 Aligned_cols=71 Identities=20% Similarity=0.290 Sum_probs=49.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHH-------hcCCccEEEEc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA-------AMGTMDGIIDT 254 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-------~~~g~d~vid~ 254 (361)
.++++||.|+ |++|.+.++.+...|++|++++++.++.... .....|-.+.+.+.+ ..+++|++|++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnn 101 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNN 101 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 5788999997 9999999999999999999998876543211 000123344333222 23579999999
Q ss_pred CCCc
Q 018094 255 VSAV 258 (361)
Q Consensus 255 ~g~~ 258 (361)
+|..
T Consensus 102 Ag~~ 105 (266)
T 3uxy_A 102 AGVI 105 (266)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9863
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.012 Score=49.77 Aligned_cols=100 Identities=19% Similarity=0.060 Sum_probs=66.7
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
...++++++||-+|+|. |..+..+++.. .+|+.++.+++....+.+.+.. ...+...+........+.+|+|+...
T Consensus 65 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 142 (231)
T 1vbf_A 65 ELDLHKGQKVLEIGTGI-GYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWA 142 (231)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred hcCCCCCCEEEEEcCCC-CHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECC
Confidence 34468899999999875 77888888774 8999999887765554333321 11111122111001234799999877
Q ss_pred CCcccHHHHHHhhccCCEEEEecC
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
.-.+....+.+.|+++|+++..-.
T Consensus 143 ~~~~~~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 143 TAPTLLCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp BBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred cHHHHHHHHHHHcCCCcEEEEEEc
Confidence 666666788999999999987743
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0071 Score=54.32 Aligned_cols=90 Identities=13% Similarity=0.136 Sum_probs=66.1
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc-
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~- 259 (361)
-.|.+|.|+|.|.+|...++.++.+|.+|++.++ +.++. ..+++|+.. ..+. .++....|+|+.++....
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~--~~~~~g~~~---~~~l---~ell~~aDvVil~~p~~~~ 215 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS--DEASYQATF---HDSL---DSLLSVSQFFSLNAPSTPE 215 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH--HHHHHTCEE---CSSH---HHHHHHCSEEEECCCCCTT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh--hhhhcCcEE---cCCH---HHHHhhCCEEEEeccCchH
Confidence 3688999999999999999999999999999998 66542 335677642 1122 233345899999887532
Q ss_pred ---cH-HHHHHhhccCCEEEEecC
Q 018094 260 ---PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 ---~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..++++..+++++.
T Consensus 216 t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 216 TRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp TTTCBSHHHHTTSCTTEEEEECSC
T ss_pred HHhhcCHHHHhhCCCCcEEEECCC
Confidence 12 346678899999999875
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.011 Score=53.30 Aligned_cols=89 Identities=20% Similarity=0.325 Sum_probs=65.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.+.+|.|+|.|.+|...++.++.+|.+|++.+++.++ +..+++|... .+. .++....|+|+.++....
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~----~~l---~~~l~~aDvVil~vp~~~~t 218 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE--EVERELNAEF----KPL---EDLLRESDFVVLAVPLTRET 218 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHCCEE----CCH---HHHHHHCSEEEECCCCCTTT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch--hhHhhcCccc----CCH---HHHHhhCCEEEECCCCChHH
Confidence 35789999999999999999999999999999988765 3335667532 122 222335899999887643
Q ss_pred --cH-HHHHHhhccCCEEEEecC
Q 018094 260 --PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..++++..+++++.
T Consensus 219 ~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 219 YHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSC
T ss_pred HHhhCHHHHhcCCCCcEEEECCC
Confidence 12 356678899998988864
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0085 Score=51.23 Aligned_cols=74 Identities=12% Similarity=0.133 Sum_probs=52.9
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCC-------eEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-----
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGV-------KVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA----- 244 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~-------~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~----- 244 (361)
++++||.|+ |.+|...++.+...|+ +|++++++.++..++.+++ +... ..|-.+.+.+.++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 567999997 9999999998888898 9999999877665554443 3321 1344555443332
Q ss_pred --cCCccEEEEcCCC
Q 018094 245 --MGTMDGIIDTVSA 257 (361)
Q Consensus 245 --~~g~d~vid~~g~ 257 (361)
.+++|++|.++|.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HhCCCCCEEEEcCCc
Confidence 2479999999885
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0081 Score=53.32 Aligned_cols=75 Identities=27% Similarity=0.391 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HHcCCcEE---ecCCCHHHHHH
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS------------PSKKSEAI---ERLGADSF---LVSRDQDEMQA 243 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~------------~~~~~~~~---~~~g~~~v---~~~~~~~~~~~ 243 (361)
.++++||.|+ +++|.+.++.+...|++|++++++ .++..+.. ++.+.... .|-.+.+.+.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 5789999997 999999999999999999999876 33333332 33454322 35555544433
Q ss_pred h-------cCCccEEEEcCCC
Q 018094 244 A-------MGTMDGIIDTVSA 257 (361)
Q Consensus 244 ~-------~~g~d~vid~~g~ 257 (361)
+ .+++|++|+++|.
T Consensus 107 ~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 107 AVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHhCCCCEEEECCCC
Confidence 2 2479999999884
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.025 Score=55.45 Aligned_cols=97 Identities=19% Similarity=0.298 Sum_probs=62.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHHcCCcEEecCCCH-HH----HHH---hcCCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQ-DE----MQA---AMGTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~-~~~~~~~~~~~g~~~v~~~~~~-~~----~~~---~~~g~d~vi 252 (361)
.|+++||.|+ +++|.+.++.+...|++|++.++. .++..+.+++.|...+....+. +. +.+ ..+++|+++
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV 400 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV 400 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence 4678999997 899999999999999999998743 2222222344565444333333 21 122 235799999
Q ss_pred EcCCCcc-------------------------cHHHHHHhhc--cCCEEEEecC
Q 018094 253 DTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGA 279 (361)
Q Consensus 253 d~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~ 279 (361)
+++|... ..+.++..|+ .+|++|.+++
T Consensus 401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS 454 (604)
T 2et6_A 401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITS 454 (604)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 9998531 1233455553 4589999976
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0075 Score=54.29 Aligned_cols=76 Identities=17% Similarity=0.191 Sum_probs=51.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CCcE-EecCCCHHHHHHhcCC--ccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-GADS-FLVSRDQDEMQAAMGT--MDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-g~~~-v~~~~~~~~~~~~~~g--~d~vid~~g~ 257 (361)
.+.+|||+|+ |.+|...+..+...|.+|+++++......+..+++ +... ..|..+.+.+.++..+ +|+||.+++.
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 4578999997 99999999999889999999998754321111111 1221 1344556666655544 9999999885
Q ss_pred c
Q 018094 258 V 258 (361)
Q Consensus 258 ~ 258 (361)
.
T Consensus 100 ~ 100 (333)
T 2q1w_A 100 Y 100 (333)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0069 Score=55.36 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=54.4
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEE-ecCC-CHHHHHHhcCCccEEEEcCCCc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSF-LVSR-DQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~-~~~~~~~~~~g~d~vid~~g~~ 258 (361)
+.+|||+|+ |.+|...++.+... |.+|++++++.++...+.+.-+.+.+ .|.. +.+.+.++..++|+||.+++..
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~ 102 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAIA 102 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCccc
Confidence 468999997 99999999988877 89999999987665433221233332 2445 5666666666899999988753
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0087 Score=51.80 Aligned_cols=75 Identities=23% Similarity=0.348 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...+..+...|++|++++++.++..+..++ .+... ..|..+.+.+.++ .++
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4678999998 9999999999999999999999866544333232 34332 2344555443332 246
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 93 id~li~~Ag~ 102 (265)
T 1h5q_A 93 ISGLIANAGV 102 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999885
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0097 Score=51.40 Aligned_cols=101 Identities=17% Similarity=0.114 Sum_probs=66.0
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
...++++.+||-+|+| .|..+..+++..+.+|+.++.+++....+.+.+.. ...+...+........+.+|+|+...
T Consensus 50 ~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 50 DIELNENSKVLDIGSG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRD 128 (266)
T ss_dssp TCCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEES
T ss_pred hcCCCCCCEEEEECCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHH
Confidence 3346889999999987 67888888887789999999988766555333321 11111111111111124799999875
Q ss_pred CCccc--------HHHHHHhhccCCEEEEecC
Q 018094 256 SAVHP--------LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 256 g~~~~--------~~~~~~~l~~~G~~v~~g~ 279 (361)
.-.+. +..+.+.|+|+|.++....
T Consensus 129 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 129 AILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 44332 5678889999999988754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0096 Score=53.66 Aligned_cols=44 Identities=18% Similarity=0.061 Sum_probs=36.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHH
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAIER 226 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~-~~~~~~~~~~~~ 226 (361)
.++++||.|+ |.+|.+.++.+...|++|++++ ++.++..++.++
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~ 90 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSAT 90 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 4678999997 9999999999999999999999 887766555443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0037 Score=53.78 Aligned_cols=67 Identities=16% Similarity=0.269 Sum_probs=45.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc----CCccEEEEcCCCc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAV 258 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~g~d~vid~~g~~ 258 (361)
++|||+|+ |.+|...+..+...|++|++++++.++... ....|..+.+.+.++. +++|++|.++|..
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~ 73 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVG 73 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCC
Confidence 36899998 999999999998899999999987654210 0001212223333322 5899999998853
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.013 Score=52.38 Aligned_cols=101 Identities=13% Similarity=0.158 Sum_probs=67.0
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCc--EEecCCCHHHHHHhcCCcc
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD--SFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~g~d 249 (361)
+.....++++++||-+|+|. |..+..+++..|++|+.++.+++....+.+. .|.. ..+...+.. .+.+.+|
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~fD 157 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE---DFAEPVD 157 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG---GCCCCCS
T ss_pred HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChH---HCCCCcC
Confidence 33444568999999999876 8888888888789999999988765444332 2321 111122221 2236799
Q ss_pred EEEEc-----CCC---cccHHHHHHhhccCCEEEEecC
Q 018094 250 GIIDT-----VSA---VHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 250 ~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
+|+.. .+. ...+..+.+.|+|+|+++....
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 99976 322 2235677889999999987643
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.027 Score=49.97 Aligned_cols=90 Identities=14% Similarity=0.189 Sum_probs=62.2
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.+|||+|+ |.+|...++.+...|.+|++++++..+. .+ + +...+ .|.. .+.+.++..++|+||.+++....
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~-~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~ 77 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-AI-N--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-cC-C--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence 57999997 9999999999999999999999984433 22 2 44333 3445 67777777799999999886321
Q ss_pred -----------HHHHHHhhccC--CEEEEecC
Q 018094 261 -----------LMPLIGLLKSQ--GKLVLVGA 279 (361)
Q Consensus 261 -----------~~~~~~~l~~~--G~~v~~g~ 279 (361)
....++.++.. .+++.++.
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS 109 (311)
T 3m2p_A 78 KISEFHDNEILTQNLYDACYENNISNIVYAST 109 (311)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 13344445443 46887764
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.014 Score=49.67 Aligned_cols=98 Identities=14% Similarity=0.206 Sum_probs=65.3
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcC----CcEEe-cCCCHHHHHHhcCCccEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG----ADSFL-VSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g----~~~v~-~~~~~~~~~~~~~g~d~v 251 (361)
..++||++||=+|+| .|..+..+|+..|- +|+.++.+++..+.+.+... ...+. +..+.+...-..+.+|+|
T Consensus 73 l~ikpG~~VldlG~G-~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 73 LPVKEGDRILYLGIA-SGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCCCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred cCCCCCCEEEEecCc-CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEE
Confidence 347999999999985 37778888888764 89999999877665544332 12222 222233322233478998
Q ss_pred EEcCCCcc----cHHHHHHhhccCCEEEEe
Q 018094 252 IDTVSAVH----PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 252 id~~g~~~----~~~~~~~~l~~~G~~v~~ 277 (361)
|....... .+..+.+.|+|+|+++..
T Consensus 152 f~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 152 YADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 86655442 355677889999999875
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.013 Score=50.55 Aligned_cols=99 Identities=20% Similarity=0.162 Sum_probs=67.5
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHH---c-CCcEE-ecCCCHHHHHHhc-CCcc
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIER---L-GADSF-LVSRDQDEMQAAM-GTMD 249 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~~---~-g~~~v-~~~~~~~~~~~~~-~g~d 249 (361)
...++++++||-+|+|. |..+..+++.. +.+|+.++.+++....+.+. . |...+ +...+.... ... +.+|
T Consensus 91 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~~~D 168 (258)
T 2pwy_A 91 LLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-ELEEAAYD 168 (258)
T ss_dssp HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-CCCTTCEE
T ss_pred HcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCCCCCcC
Confidence 34578999999999985 88888999885 56999999887765444322 2 53222 111221111 122 3699
Q ss_pred EEEEcCCCc-ccHHHHHHhhccCCEEEEec
Q 018094 250 GIIDTVSAV-HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 250 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g 278 (361)
+|+...... ..+..+.+.|+++|+++.+.
T Consensus 169 ~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 169 GVALDLMEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp EEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 999876665 55788999999999999874
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.37 E-value=0.004 Score=53.94 Aligned_cols=72 Identities=22% Similarity=0.304 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh------cCCccEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA------MGTMDGII 252 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~------~~g~d~vi 252 (361)
.++++||.|+ +.+|.+.++.+...|++|+++++..++ ..++++... ..|-.+.+.+.++ .+++|+++
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv 84 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV 84 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence 4688999997 999999999999999999999986543 335566432 2345555443332 24899999
Q ss_pred EcCCC
Q 018094 253 DTVSA 257 (361)
Q Consensus 253 d~~g~ 257 (361)
+++|.
T Consensus 85 ~nAg~ 89 (257)
T 3tl3_A 85 NCAGT 89 (257)
T ss_dssp ECGGG
T ss_pred ECCCC
Confidence 99984
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0087 Score=54.32 Aligned_cols=90 Identities=20% Similarity=0.201 Sum_probs=64.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++..++. ..+++|+..+ .+. .++....|+|+-++....
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~~~~g~~~~---~~l---~ell~~aDvV~l~~P~t~~t~ 238 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG--VERALGLQRV---STL---QDLLFHSDCVTLHCGLNEHNH 238 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT--HHHHHTCEEC---SSH---HHHHHHCSEEEECCCCCTTCT
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh--hHhhcCCeec---CCH---HHHHhcCCEEEEcCCCCHHHH
Confidence 57899999999999999999999999999998776542 2246676421 122 223335899998876531
Q ss_pred -cH-HHHHHhhccCCEEEEecCC
Q 018094 260 -PL-MPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~~ 280 (361)
.+ ...+..|+++..+++++..
T Consensus 239 ~li~~~~l~~mk~gailIN~arg 261 (347)
T 1mx3_A 239 HLINDFTVKQMRQGAFLVNTARG 261 (347)
T ss_dssp TSBSHHHHTTSCTTEEEEECSCT
T ss_pred HHhHHHHHhcCCCCCEEEECCCC
Confidence 12 4567788888888888753
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0088 Score=51.15 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=53.2
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHc-CCcE---EecCCCHHHHHHhc-------C--C
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL-GADS---FLVSRDQDEMQAAM-------G--T 247 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~~~-g~~~---v~~~~~~~~~~~~~-------~--g 247 (361)
++++||.|+ |.+|...++.+...| .+|++++++.++..++ +++ +... ..|..+.+.+.++. + +
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH-HhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 578999997 999999999999999 9999999988776555 444 2221 23445544433332 2 7
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++|.++|..
T Consensus 82 id~li~~Ag~~ 92 (250)
T 1yo6_A 82 LSLLINNAGVL 92 (250)
T ss_dssp CCEEEECCCCC
T ss_pred CcEEEECCccc
Confidence 99999998753
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.089 Score=47.19 Aligned_cols=130 Identities=14% Similarity=0.176 Sum_probs=82.2
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEE-eCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+|.|+|.|.+|...+..++.. +.+++.+ +++.++..++.+++|.. +.+.+.+.+ ...+|+|+.++........
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~~~~l~-~~~~D~V~i~tp~~~h~~~ 79 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VRTIDAIEA-AADIDAVVICTPTDTHADL 79 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----ECCHHHHHH-CTTCCEEEECSCGGGHHHH
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cCCHHHHhc-CCCCCEEEEeCCchhHHHH
Confidence 588999999999888877765 6788754 45555666777788865 334333222 2379999999988765666
Q ss_pred HHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcEE-EecccCCHHHHHHHHHHHHcCCCcee
Q 018094 264 LIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
+..++..+ +-+++..+ +..+... .-.+++.+ .++.......+..+.+++.+|.+-..
T Consensus 80 ~~~al~~g-k~v~~EKP---~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i 144 (331)
T 4hkt_A 80 IERFARAG-KAIFCEKP---IDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRIGEV 144 (331)
T ss_dssp HHHHHHTT-CEEEECSC---SCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTTCSE
T ss_pred HHHHHHcC-CcEEEecC---CCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCCCce
Confidence 77777665 55666432 2222211 12234443 44443334567888888999887644
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.021 Score=51.93 Aligned_cols=96 Identities=17% Similarity=0.128 Sum_probs=64.6
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHc-CCcEE-ec-CCCHHHHHHhcCCccEEEEcCCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK--SEAIERL-GADSF-LV-SRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~--~~~~~~~-g~~~v-~~-~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
+.+|||+|+ |.+|...++.+...|.+|++++++.++. ..+ +.. +.+.+ .| ..+.+.+.++..++|+||.+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l-~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-HTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHH-hhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 467999998 9999999998888899999999887653 222 222 33222 34 55667777777889999987764
Q ss_pred c-----ccHHHHHHhhccC---CEEEEecCC
Q 018094 258 V-----HPLMPLIGLLKSQ---GKLVLVGAP 280 (361)
Q Consensus 258 ~-----~~~~~~~~~l~~~---G~~v~~g~~ 280 (361)
. ......++.++.. +++|.++..
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~ 114 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP 114 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence 3 1113344444333 588888754
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.011 Score=51.20 Aligned_cols=74 Identities=19% Similarity=0.209 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|+++.+++++..+..++ .+... ..|-.+.+.+.++ .++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4678999997 9999999999999999999997776543333222 22221 2345555444332 247
Q ss_pred ccEEEEcCC
Q 018094 248 MDGIIDTVS 256 (361)
Q Consensus 248 ~d~vid~~g 256 (361)
+|++|.++|
T Consensus 86 id~lv~~Ag 94 (264)
T 3i4f_A 86 IDFLINNAG 94 (264)
T ss_dssp CCEEECCCC
T ss_pred CCEEEECCc
Confidence 999999999
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.016 Score=50.73 Aligned_cols=76 Identities=11% Similarity=0.199 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-ch--HHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHHcCCcEE--ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GG--LGHVAVKFAKAMGVKVTVISTSP--SKKSEAIERLGADSF--LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~--vG~~a~~la~~~g~~Vi~~~~~~--~~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~g~ 248 (361)
.++++||.|+ |. +|...++.+...|++|++++++. +...++.++.+.-.. .|-.+.+.+.++ .+++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL 104 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 5789999985 55 99999999999999999999887 444555444443222 344555443332 2479
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++|+++|..
T Consensus 105 d~li~nAg~~ 114 (280)
T 3nrc_A 105 DAIVHSIAFA 114 (280)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCccC
Confidence 9999999863
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=96.31 E-value=0.019 Score=50.66 Aligned_cols=74 Identities=24% Similarity=0.225 Sum_probs=55.3
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHH-HHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKS-EAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~-~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
..+|||+|+ |.+|...++.+...| .+|++++++.++.. ...+..+.+.+ .|..+.+.+.++..++|+||.+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence 468999998 999999998888778 89999999876531 11233455433 3556677777777899999999874
|
| >2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.032 Score=49.82 Aligned_cols=113 Identities=16% Similarity=0.179 Sum_probs=72.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
....+|.|+|+|.+|...+..+.. .|. +|.+.+++.++.+++.++++.. +....+ +.+...+.|+|+.++....
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~-~~~~~~---~~e~v~~aDiVi~atp~~~ 208 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGE-VRVCSS---VQEAVAGADVIITVTLATE 208 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSC-CEECSS---HHHHHTTCSEEEECCCCSS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCC-eEEeCC---HHHHHhcCCEEEEEeCCCC
Confidence 456789999999999988877655 487 8999999988888887777721 111222 2233456899999987533
Q ss_pred cHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEe
Q 018094 260 PLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGG 300 (361)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g 300 (361)
.+-.. ..++++-.++.+|...... .+. ..+..++..+..
T Consensus 209 ~v~~~-~~l~~g~~vi~~g~~~p~~~el~-~~~~~~g~~~vD 248 (312)
T 2i99_A 209 PILFG-EWVKPGAHINAVGASRPDWRELD-DELMKEAVLYVD 248 (312)
T ss_dssp CCBCG-GGSCTTCEEEECCCCSTTCCSBC-HHHHHHSEEEES
T ss_pred cccCH-HHcCCCcEEEeCCCCCCCceecc-HHHHhcCEEEEC
Confidence 11111 5678888888887654332 333 234445544443
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=96.31 E-value=0.009 Score=52.13 Aligned_cols=75 Identities=20% Similarity=0.302 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhH-HHH---HHHcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEA---IERLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~-~~~---~~~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|+++++..++. ..+ .++.+.... .|..+.+.+.++ .++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 107 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG 107 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999997 9999999999999999999999954432 222 233443322 244454433322 248
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|.++|.
T Consensus 108 id~li~nAg~ 117 (271)
T 4iin_A 108 LSYLVNNAGV 117 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999986
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.014 Score=52.49 Aligned_cols=75 Identities=17% Similarity=0.176 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-----hhHHHHH---HHcCCcE---EecCCCHHHHHHh------
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-----SKKSEAI---ERLGADS---FLVSRDQDEMQAA------ 244 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-----~~~~~~~---~~~g~~~---v~~~~~~~~~~~~------ 244 (361)
.++++||+|+ |.+|...++.+...|++|++++++. ++..++. ++.+... ..|-.+.+.+.++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 3578999997 9999999999999999999987752 2222222 2334322 2345555443332
Q ss_pred -cCCccEEEEcCCC
Q 018094 245 -MGTMDGIIDTVSA 257 (361)
Q Consensus 245 -~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 84 ~~g~iD~lVnnAG~ 97 (324)
T 3u9l_A 84 EDGRIDVLIHNAGH 97 (324)
T ss_dssp HHSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 2489999999994
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0061 Score=54.97 Aligned_cols=89 Identities=18% Similarity=0.255 Sum_probs=64.4
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~---- 258 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++...+.. ..+++|... .+ +.++....|+|+-++...
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~~~~g~~~----~~---l~ell~~aDvV~l~~P~t~~t~ 215 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQ-TEQRLGLRQ----VA---CSELFASSDFILLALPLNADTL 215 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHH-HHHHHTEEE----CC---HHHHHHHCSEEEECCCCSTTTT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHh-HHHhcCcee----CC---HHHHHhhCCEEEEcCCCCHHHH
Confidence 578999999999999999999999999999988763332 234566532 12 223333579999887642
Q ss_pred ccH-HHHHHhhccCCEEEEecC
Q 018094 259 HPL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 ~~~-~~~~~~l~~~G~~v~~g~ 279 (361)
+.+ ...+..|+++..+++++.
T Consensus 216 ~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 216 HLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp TCBCHHHHTTSCTTEEEEECSC
T ss_pred HHhCHHHHhhCCCCcEEEECCC
Confidence 112 467778899999999874
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.28 E-value=0.014 Score=52.05 Aligned_cols=91 Identities=13% Similarity=0.143 Sum_probs=62.9
Q ss_pred CEEEEEccchHHHHHHHHHHH--CCCeEEEEeCCc-hh-HHHHHHHcCCcEEecCCCHHHHHHhc--CCccEEEEcCCCc
Q 018094 185 MHVGVVGLGGLGHVAVKFAKA--MGVKVTVISTSP-SK-KSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV 258 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~--~g~~Vi~~~~~~-~~-~~~~~~~~g~~~v~~~~~~~~~~~~~--~g~d~vid~~g~~ 258 (361)
-+|.|+|+|.+|...+..+.. -+.+++.+++.+ ++ ..++++++|.... ..+.+.+.+.+ .++|+||++++..
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--~~~~e~ll~~~~~~~iDvV~~atp~~ 82 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSAS 82 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--cCCHHHHHhccCCCCCcEEEECCChH
Confidence 468999999999988888843 467777666654 44 4566678887532 22223333322 3699999999976
Q ss_pred ccHHHHHHhhcc--CCEEEEe
Q 018094 259 HPLMPLIGLLKS--QGKLVLV 277 (361)
Q Consensus 259 ~~~~~~~~~l~~--~G~~v~~ 277 (361)
.....+..+++. |..++..
T Consensus 83 ~h~~~a~~al~a~~Gk~Vi~e 103 (312)
T 1nvm_B 83 AHVQNEALLRQAKPGIRLIDL 103 (312)
T ss_dssp HHHHHHHHHHHHCTTCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEEc
Confidence 656778888888 8887764
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.026 Score=53.22 Aligned_cols=76 Identities=17% Similarity=0.299 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHcCCcEE-ecCCCHHHHHH-------hcCC-ccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERLGADSF-LVSRDQDEMQA-------AMGT-MDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~--~~~~~~~~~g~~~v-~~~~~~~~~~~-------~~~g-~d~ 250 (361)
+++++||.|+ |++|...++.+...|++|+++.++.. +..+..++++...+ .|-.+.+.+.+ ..++ +|+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~ 291 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI 291 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence 5789999987 99999999999889999999887542 33444455665432 34444333222 2234 999
Q ss_pred EEEcCCCc
Q 018094 251 IIDTVSAV 258 (361)
Q Consensus 251 vid~~g~~ 258 (361)
+|+++|..
T Consensus 292 lV~nAGv~ 299 (454)
T 3u0b_A 292 LVNNAGIT 299 (454)
T ss_dssp EEECCCCC
T ss_pred EEECCccc
Confidence 99999864
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.009 Score=51.70 Aligned_cols=125 Identities=22% Similarity=0.254 Sum_probs=71.7
Q ss_pred cCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 018094 146 EHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE 225 (361)
Q Consensus 146 ~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~ 225 (361)
....+.+++++.+..... +.+. .....+... ++++++||-+|+|. |..++.+++ .|++|+.++.++.....+.+
T Consensus 87 ~~~~~~l~p~~~fgtg~~-~tt~-~~~~~l~~~--~~~~~~VLDiGcG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~ 160 (254)
T 2nxc_A 87 AEIPLVIEPGMAFGTGHH-ETTR-LALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEA 160 (254)
T ss_dssp SSEEEECCCC-----CCS-HHHH-HHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHH
T ss_pred CceEEEECCCccccCCCC-HHHH-HHHHHHHHh--cCCCCEEEEecCCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHH
Confidence 345677777765554321 1111 112334433 47899999999865 777777666 57799999988876544322
Q ss_pred ---HcCCc-EEecCCCHHHHHHh-cCCccEEEEcCCCc---ccHHHHHHhhccCCEEEEecC
Q 018094 226 ---RLGAD-SFLVSRDQDEMQAA-MGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 226 ---~~g~~-~v~~~~~~~~~~~~-~~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 279 (361)
..+.+ .++ ..+... .+ .+.+|+|+...-.. ..+..+.+.|+++|+++..+.
T Consensus 161 n~~~~~~~v~~~-~~d~~~--~~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 161 NAKRNGVRPRFL-EGSLEA--ALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp HHHHTTCCCEEE-ESCHHH--HGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHcCCcEEEE-ECChhh--cCcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEee
Confidence 23432 222 222211 12 35799999754322 235667788999999998754
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.016 Score=52.00 Aligned_cols=76 Identities=22% Similarity=0.333 Sum_probs=52.7
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC----------chhHHHHHHH---cCCcEEe---cCCCHHHHHHh
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------PSKKSEAIER---LGADSFL---VSRDQDEMQAA 244 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~----------~~~~~~~~~~---~g~~~v~---~~~~~~~~~~~ 244 (361)
-.++++||.|+ |++|.+.+..+...|++|++++++ .++..++.++ .+....+ |-.+.+.+.++
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 35789999997 999999999999999999999876 3444343333 3443222 34444443332
Q ss_pred -------cCCccEEEEcCCC
Q 018094 245 -------MGTMDGIIDTVSA 257 (361)
Q Consensus 245 -------~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 2479999999985
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.08 Score=47.48 Aligned_cols=131 Identities=16% Similarity=0.193 Sum_probs=78.1
Q ss_pred EEEEEccchHHHHH-HHHHHHCCCeEEEE-eCCchhHHHHHHHcCCcEEecCCCHHHHHHhc-CCccEEEEcCCCcccHH
Q 018094 186 HVGVVGLGGLGHVA-VKFAKAMGVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 186 ~VlI~Gag~vG~~a-~~la~~~g~~Vi~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~ 262 (361)
+|.|+|+|.+|... +..++..+.+++.+ +++.++..++.+++|...+ +.+.+.+ +. ..+|+|+.++.......
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~--~~~~~~~--l~~~~~D~V~i~tp~~~h~~ 77 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKS--VTSVEEL--VGDPDVDAVYVSTTNELHRE 77 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCC--BSCHHHH--HTCTTCCEEEECSCGGGHHH
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcc--cCCHHHH--hcCCCCCEEEEeCChhHhHH
Confidence 57899999999876 54444477887755 4555566667778886422 2232222 22 36999999998765466
Q ss_pred HHHHhhccCCEEEEecCCCCCcccChHH---H----hhCCcEE-EecccCCHHHHHHHHHHHHcCCCcee
Q 018094 263 PLIGLLKSQGKLVLVGAPEKPLELPAFS---L----LMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
.+..+++. |+-+.+.. ++..+... + -.+++.+ .+........++.+.+++.+|.+-..
T Consensus 78 ~~~~al~~-Gk~v~~ek---P~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG~i 143 (332)
T 2glx_A 78 QTLAAIRA-GKHVLCEK---PLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGRP 143 (332)
T ss_dssp HHHHHHHT-TCEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTTSSE
T ss_pred HHHHHHHC-CCeEEEeC---CCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCCCCe
Confidence 67777776 45555533 22222211 1 1234443 33333333457788888888877543
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0021 Score=55.66 Aligned_cols=87 Identities=20% Similarity=0.189 Sum_probs=59.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~--- 258 (361)
.+ +++|+|+|.+|.+++..+...|+ +|+++.++.++.++++++++. ... +.+.+...++|+||+++...
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~---~~~~~~~~~aDiVInatp~gm~p 180 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL---DQLDEVVKKAKSLFNTTSVGMKG 180 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG---GGHHHHHHTCSEEEECSSTTTTS
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH---HHHHhhhcCCCEEEECCCCCCCC
Confidence 45 89999999999999999999998 999999988776555444331 222 22333345799999987532
Q ss_pred --ccHHHHHHhhccCCEEEEec
Q 018094 259 --HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 259 --~~~~~~~~~l~~~G~~v~~g 278 (361)
..+ ....++++..++++.
T Consensus 181 ~~~~i--~~~~l~~~~~V~Div 200 (253)
T 3u62_A 181 EELPV--SDDSLKNLSLVYDVI 200 (253)
T ss_dssp CCCSC--CHHHHTTCSEEEECS
T ss_pred CCCCC--CHHHhCcCCEEEEee
Confidence 112 134467777777764
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0018 Score=53.47 Aligned_cols=95 Identities=17% Similarity=0.099 Sum_probs=61.0
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCC----------CeEEEEeCCchhHHHHHHHcCCcEEe-cC--CCHHH---H
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG----------VKVTVISTSPSKKSEAIERLGADSFL-VS--RDQDE---M 241 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g----------~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~--~~~~~---~ 241 (361)
...++++++||-+|+|. |.++..+++..+ .+|+.++.++.... -.+. .+ .. ...+. +
T Consensus 17 ~~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~-----~~~~-~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 17 HQILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPL-----EGAT-FLCPADVTDPRTSQRI 89 (196)
T ss_dssp HCCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCC-----TTCE-EECSCCTTSHHHHHHH
T ss_pred cCCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhcccC-----CCCe-EEEeccCCCHHHHHHH
Confidence 34468899999999987 889999999876 68998888764310 0122 22 11 11111 1
Q ss_pred HH-hc-CCccEEEE-----cCCCc------------ccHHHHHHhhccCCEEEEecC
Q 018094 242 QA-AM-GTMDGIID-----TVSAV------------HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 242 ~~-~~-~g~d~vid-----~~g~~------------~~~~~~~~~l~~~G~~v~~g~ 279 (361)
.. .. +.+|+|+. +.+.. ..+..+.+.|+++|+++..-.
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 11 12 37999995 33321 336668889999999987643
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.01 Score=54.13 Aligned_cols=76 Identities=11% Similarity=0.048 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHH--CCCeEEEEeCCchhH------------HHHHHHcCCcE-EecCCCHHHHHHh-c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSKK------------SEAIERLGADS-FLVSRDQDEMQAA-M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~--~g~~Vi~~~~~~~~~------------~~~~~~~g~~~-v~~~~~~~~~~~~-~ 245 (361)
.+.+|||+|+ |.+|...+..+.. .|.+|+++++..... .......+... ..|..+.+.+.++ .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 4678999998 9999999999888 899999999865410 00001112222 2355666777777 6
Q ss_pred CCccEEEEcCCCc
Q 018094 246 GTMDGIIDTVSAV 258 (361)
Q Consensus 246 ~g~d~vid~~g~~ 258 (361)
.++|+||.+++..
T Consensus 89 ~~~D~vih~A~~~ 101 (362)
T 3sxp_A 89 LHFDYLFHQAAVS 101 (362)
T ss_dssp SCCSEEEECCCCC
T ss_pred cCCCEEEECCccC
Confidence 6999999999853
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0091 Score=52.73 Aligned_cols=94 Identities=9% Similarity=0.025 Sum_probs=63.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc---E---EecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---S---FLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~---~---v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
-.+++++|+|+|.+|.+++..+...| +|+++.++.++..+++++++.. . .++..+ +.+..+++|++++++
T Consensus 126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a 201 (287)
T 1nvt_A 126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT 201 (287)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence 35789999999999999999999999 9999999887776666655321 0 011111 112235799999999
Q ss_pred CCcccHH-----H-HHHhhccCCEEEEecC
Q 018094 256 SAVHPLM-----P-LIGLLKSQGKLVLVGA 279 (361)
Q Consensus 256 g~~~~~~-----~-~~~~l~~~G~~v~~g~ 279 (361)
|...... . ....++++..++++.-
T Consensus 202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y 231 (287)
T 1nvt_A 202 PIGMYPNIDVEPIVKAEKLREDMVVMDLIY 231 (287)
T ss_dssp CTTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred CCCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence 8654110 0 2345677777777764
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0037 Score=54.88 Aligned_cols=101 Identities=14% Similarity=0.027 Sum_probs=63.7
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEE
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~v 251 (361)
.+++....--.+++++|+|+|.+|.+++..+...|+ +|+++.++.++..+++++ .. .. ..+.+.+....+|+|
T Consensus 106 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--~~-~~---~~~~~~~~~~~aDiV 179 (277)
T 3don_A 106 NGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--IN-KI---NLSHAESHLDEFDII 179 (277)
T ss_dssp HHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--CE-EE---CHHHHHHTGGGCSEE
T ss_pred HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--cc-cc---cHhhHHHHhcCCCEE
Confidence 344444322357889999999999999999999999 899999988775444221 11 11 223344445679999
Q ss_pred EEcCCCcccHH----HHHHhhccCCEEEEecC
Q 018094 252 IDTVSAVHPLM----PLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 252 id~~g~~~~~~----~~~~~l~~~G~~v~~g~ 279 (361)
|++++....-. .....++++..++++.-
T Consensus 180 InaTp~Gm~~~~~~~l~~~~l~~~~~V~D~vY 211 (277)
T 3don_A 180 INTTPAGMNGNTDSVISLNRLASHTLVSDIVY 211 (277)
T ss_dssp EECCC-------CCSSCCTTCCSSCEEEESCC
T ss_pred EECccCCCCCCCcCCCCHHHcCCCCEEEEecC
Confidence 99987532000 01344677777777743
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.012 Score=53.02 Aligned_cols=72 Identities=24% Similarity=0.337 Sum_probs=52.5
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
-+|||+|+ |.+|...++.+...|.+|++++++.++..++ ...+...+ .|..+.+.+.++..++|+||.+++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-AYLEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 37999998 9999999999999999999999987654332 22244332 3555667777777789999999885
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=96.21 E-value=0.025 Score=51.33 Aligned_cols=91 Identities=19% Similarity=0.326 Sum_probs=64.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc-
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~-~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~- 259 (361)
-.|.+|.|+|.|.+|...++.++ .+|.+|++.+++.++.... +++|...+ .+.+ ++....|+|+.++....
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~-~~~g~~~~---~~l~---ell~~aDvVil~vp~~~~ 233 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE-KALGAERV---DSLE---ELARRSDCVSVSVPYMKL 233 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-HHHTCEEC---SSHH---HHHHHCSEEEECCCCSGG
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH-hhcCcEEe---CCHH---HHhccCCEEEEeCCCChH
Confidence 46889999999999999999999 9999999998876654333 45675422 1222 22235899999876532
Q ss_pred ---cH-HHHHHhhccCCEEEEecC
Q 018094 260 ---PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 ---~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..++++..+++++.
T Consensus 234 t~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 234 THHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp GTTCBCHHHHHHSCTTEEEEECSC
T ss_pred HHHHhhHHHHhcCCCCCEEEECCC
Confidence 12 346677888888888764
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.024 Score=49.85 Aligned_cols=88 Identities=19% Similarity=0.225 Sum_probs=61.3
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
.+|.|+|.|.+|...++.+...|.+|++.+++.++..++ ++.|... ..+.. +.....|+||.++.....+...
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~---~~~~~---~~~~~aDvvi~~vp~~~~~~~v 74 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEEL-AALGAER---AATPC---EVVESCPVTFAMLADPAAAEEV 74 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-HHTTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCee---cCCHH---HHHhcCCEEEEEcCCHHHHHHH
Confidence 468899999999999999999999999999998887666 4456532 12221 2223479999998865334444
Q ss_pred H-------HhhccCCEEEEecC
Q 018094 265 I-------GLLKSQGKLVLVGA 279 (361)
Q Consensus 265 ~-------~~l~~~G~~v~~g~ 279 (361)
+ ..++++..++.++.
T Consensus 75 ~~~~~~l~~~l~~~~~vi~~st 96 (287)
T 3pef_A 75 CFGKHGVLEGIGEGRGYVDMST 96 (287)
T ss_dssp HHSTTCHHHHCCTTCEEEECSC
T ss_pred HcCcchHhhcCCCCCEEEeCCC
Confidence 4 45667777776643
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.011 Score=50.42 Aligned_cols=97 Identities=19% Similarity=0.147 Sum_probs=65.0
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHH---HcCCc--EEecCCCH-HHHHHh--------
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAIE---RLGAD--SFLVSRDQ-DEMQAA-------- 244 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~~---~~g~~--~v~~~~~~-~~~~~~-------- 244 (361)
..++++||-+|+| .|..+..+++.. +.+|+.++.+++....+.+ +.|.. ..+...+. +.+...
T Consensus 58 ~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 58 ISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred hhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 3578899999987 588888999987 5699999988765443322 23542 11222232 223322
Q ss_pred -------c-CCccEEEEcCCCc---ccHHHHHHhhccCCEEEEec
Q 018094 245 -------M-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 245 -------~-~g~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 278 (361)
. +.+|+||...... ..+..+.+.|+++|.++.-.
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 5799999876654 23567888999999998753
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.025 Score=49.96 Aligned_cols=92 Identities=18% Similarity=0.298 Sum_probs=61.3
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHH---HcCCcEE-ecCCCHHHHHHhcCCccEEEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----KSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-----~~~~~~---~~g~~~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
..+|||+|+ |.+|...+..+...|.+|++++++... .....+ ..|.+.+ .|..+.+.+.++..++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 357999998 999999999999999999999987421 111112 2344433 355566667666678999999
Q ss_pred cCCCcc--cHHHHHHhhccC---CEEE
Q 018094 254 TVSAVH--PLMPLIGLLKSQ---GKLV 275 (361)
Q Consensus 254 ~~g~~~--~~~~~~~~l~~~---G~~v 275 (361)
+++... .....++.++.. ++++
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 988642 234444554433 4666
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.026 Score=50.84 Aligned_cols=89 Identities=18% Similarity=0.261 Sum_probs=63.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++.... +++|.... +.+ ++....|+|+.++....
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~----~l~---e~l~~aDvVi~~vp~~~~t~ 225 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFV----STP---ELAAQSDFIVVACSLTPATE 225 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-HTTTCEEC----CHH---HHHHHCSEEEECCCCCTTTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-HhcCceeC----CHH---HHHhhCCEEEEeCCCChHHH
Confidence 57899999999999999999999999999999876554333 45565321 222 22235899999887532
Q ss_pred -cH-HHHHHhhccCCEEEEecC
Q 018094 260 -PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..++++..+++++.
T Consensus 226 ~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 226 GLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp TCBSHHHHHHSCTTCEEEECSC
T ss_pred HhhCHHHHhcCCCCcEEEECCC
Confidence 22 356677888888888764
|
| >1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.015 Score=52.48 Aligned_cols=87 Identities=23% Similarity=0.255 Sum_probs=63.7
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++..++. + +++ +.. . .+ +.++....|+|+.++.....
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~-~--~~---l~ell~~aDvV~l~~p~~~~t~ 214 (333)
T 1j4a_A 145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-GYY-V--DS---LDDLYKQADVISLHVPDVPANV 214 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-TCB-C--SC---HHHHHHHCSEEEECSCCCGGGT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-Cee-c--CC---HHHHHhhCCEEEEcCCCcHHHH
Confidence 57899999999999999999999999999999877653 2 333 321 1 12 22333468999999875431
Q ss_pred --H-HHHHHhhccCCEEEEecC
Q 018094 261 --L-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 --~-~~~~~~l~~~G~~v~~g~ 279 (361)
+ ...+..|++++.+++++.
T Consensus 215 ~li~~~~l~~mk~ga~lIn~ar 236 (333)
T 1j4a_A 215 HMINDESIAKMKQDVVIVNVSR 236 (333)
T ss_dssp TCBSHHHHHHSCTTEEEEECSC
T ss_pred HHHhHHHHhhCCCCcEEEECCC
Confidence 2 356788999999999975
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.023 Score=51.48 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=54.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHHc------CCcEE-ecCCCHHHHHHhcCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK----KSEAIERL------GADSF-LVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~----~~~~~~~~------g~~~v-~~~~~~~~~~~~~~g~d~ 250 (361)
.+.+|||+|+ |.+|...+..+...|.+|+++++.... ...+.+.+ +...+ .|..+.+.+.++..++|+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 3568999998 999999999999999999999986532 22222222 22221 245556667777779999
Q ss_pred EEEcCCCc
Q 018094 251 IIDTVSAV 258 (361)
Q Consensus 251 vid~~g~~ 258 (361)
||.+++..
T Consensus 106 vih~A~~~ 113 (352)
T 1sb8_A 106 VLHQAALG 113 (352)
T ss_dssp EEECCSCC
T ss_pred EEECCccc
Confidence 99999853
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.004 Score=51.81 Aligned_cols=133 Identities=18% Similarity=0.185 Sum_probs=75.2
Q ss_pred ccceEEE-eccCceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEe
Q 018094 137 GYSDIMV-ADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVIS 214 (361)
Q Consensus 137 ~~~~~~~-v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~ 214 (361)
.|.+|.. .+....+.+++++.+..+.. +. .......+... ++++++||-+|+|. |..+..+++. +. +|+.++
T Consensus 17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~-~~~~~~~l~~~--~~~~~~vLDiG~G~-G~~~~~l~~~-~~~~v~~vD 90 (205)
T 3grz_A 17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-QT-TQLAMLGIERA--MVKPLTVADVGTGS-GILAIAAHKL-GAKSVLATD 90 (205)
T ss_dssp TTCCCCCSSTTCEEEEESCC-----CCH-HH-HHHHHHHHHHH--CSSCCEEEEETCTT-SHHHHHHHHT-TCSEEEEEE
T ss_pred cccccccCCCCceeEEecCCcccCCCCC-cc-HHHHHHHHHHh--ccCCCEEEEECCCC-CHHHHHHHHC-CCCEEEEEE
Confidence 4566666 67778888888887666431 11 11112223222 46889999999875 6677777764 55 999999
Q ss_pred CCchhHHHHHH---HcCCc--EEecCCCHHHHHHhcCCccEEEEcCCCcc---cHHHHHHhhccCCEEEEec
Q 018094 215 TSPSKKSEAIE---RLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 215 ~~~~~~~~~~~---~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g 278 (361)
.+++....+.+ ..+.. .++..+-.+ ...+.+|+|+....... .+..+.+.|+++|+++...
T Consensus 91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 159 (205)
T 3grz_A 91 ISDESMTAAEENAALNGIYDIALQKTSLLA---DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG 159 (205)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCceEEEeccccc---cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 88765443322 23432 222221111 12357999997654332 1344556789999998753
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=96.11 E-value=0.015 Score=49.95 Aligned_cols=100 Identities=22% Similarity=0.196 Sum_probs=64.3
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCc--EEecCCCHHHHHHhcCCccEE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~--~v~~~~~~~~~~~~~~g~d~v 251 (361)
....++++.+||-+|+|. |..+..+++..+.+|+.++.+++....+. ++.|.. ..+...+...... .+.||+|
T Consensus 30 ~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 30 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEE
T ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEE
Confidence 334578999999999865 77888889888999999998876544332 233432 1111122111111 3469999
Q ss_pred EEcCCC------cccHHHHHHhhccCCEEEEec
Q 018094 252 IDTVSA------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 252 id~~g~------~~~~~~~~~~l~~~G~~v~~g 278 (361)
+....- ...+..+.+.|+|+|+++...
T Consensus 108 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 108 ACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 863221 223677888999999998763
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.10 E-value=0.018 Score=52.06 Aligned_cols=88 Identities=15% Similarity=0.252 Sum_probs=63.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++....... ..|...+ .+ +.++....|+|+-++....
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~~g~~~~---~~---l~ell~~sDvV~l~~Plt~~T~ 242 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHAL---EEGAIYH---DT---LDSLLGASDIFLIAAPGRPELK 242 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHH---HTTCEEC---SS---HHHHHHTCSEEEECSCCCGGGT
T ss_pred CCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhh---hcCCeEe---CC---HHHHHhhCCEEEEecCCCHHHH
Confidence 5789999999999999999999999999999987544322 1244321 12 2334446899998887421
Q ss_pred -cH-HHHHHhhccCCEEEEecC
Q 018094 260 -PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..|+++..+++++.
T Consensus 243 ~li~~~~l~~mk~gailIN~aR 264 (345)
T 4g2n_A 243 GFLDHDRIAKIPEGAVVINISR 264 (345)
T ss_dssp TCBCHHHHHHSCTTEEEEECSC
T ss_pred HHhCHHHHhhCCCCcEEEECCC
Confidence 12 457788999999999874
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.026 Score=51.02 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=63.1
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc----hhHHHH--HHHcCCcEE-ecCCCHHHHHHhcC--CccEEEEc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----SKKSEA--IERLGADSF-LVSRDQDEMQAAMG--TMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~----~~~~~~--~~~~g~~~v-~~~~~~~~~~~~~~--g~d~vid~ 254 (361)
.+|||+|+ |.+|...+..+...|.+|++++++. ++...+ .+..+.+.+ .|..+.+.+.++.. ++|+||.+
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 57999998 9999999999999999999999976 232211 123355433 35566677776666 99999999
Q ss_pred CCCcc--cHHHHHHhhccCC---EEE
Q 018094 255 VSAVH--PLMPLIGLLKSQG---KLV 275 (361)
Q Consensus 255 ~g~~~--~~~~~~~~l~~~G---~~v 275 (361)
++... .....++.++..| +++
T Consensus 91 a~~~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 91 VGGESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred CchhhHHHHHHHHHHHHHcCCceEEe
Confidence 98632 2345555555545 555
|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.1 Score=47.31 Aligned_cols=132 Identities=19% Similarity=0.169 Sum_probs=80.9
Q ss_pred CEEEEEccchHHH-HHHHHHHHC-CCeEEEE-eCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 185 MHVGVVGLGGLGH-VAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 185 ~~VlI~Gag~vG~-~a~~la~~~-g~~Vi~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-+|.|+|+|.+|. ..+..++.. +.+++.+ +++.++..++++++|.... .+.+.+.+ ...+|+|+.|+....-.
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~---~~~~~ll~-~~~~D~V~i~tp~~~h~ 103 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV---EGYPALLE-RDDVDAVYVPLPAVLHA 103 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE---ESHHHHHT-CTTCSEEEECCCGGGHH
T ss_pred eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc---CCHHHHhc-CCCCCEEEECCCcHHHH
Confidence 3688999999998 566666665 7788755 4555666777788887543 22222211 23699999999887656
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcEE-EecccCCHHHHHHHHHHHHcCCCcee
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
..+..+++.+ +-|++.. ++..+... .-.+++.+ .++.......+..+-+++.+|.+-..
T Consensus 104 ~~~~~al~aG-k~Vl~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i 170 (350)
T 3rc1_A 104 EWIDRALRAG-KHVLAEK---PLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVIGEI 170 (350)
T ss_dssp HHHHHHHHTT-CEEEEES---SSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTTCSE
T ss_pred HHHHHHHHCC-CcEEEeC---CCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCCCCe
Confidence 6677777655 4466643 22222211 12244433 44433333457778888888877544
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.025 Score=51.04 Aligned_cols=88 Identities=23% Similarity=0.292 Sum_probs=61.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++ +..+++|... .+.+ ++....|+|+.++....
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~--~~~~~~g~~~----~~l~---e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV--NVEKELKARY----MDID---ELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH--HHHHHHTEEE----CCHH---HHHHHCSEEEECCCCCTTT
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch--hhhhhcCcee----cCHH---HHHhhCCEEEEcCCCChHH
Confidence 36789999999999999999999999999999988765 2334556432 1222 22235788888877651
Q ss_pred --cH-HHHHHhhccCCEEEEecC
Q 018094 260 --PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..++++ .+++++.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~sr 236 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGR 236 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSC
T ss_pred HHHhCHHHHhhCCCC-EEEECCC
Confidence 12 2346677888 7777763
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.019 Score=51.73 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=52.8
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
..+.+|||+|+ |.+|...++.+...|.+|+++++..++ .+...+ .|..+.+.+.++..++|+||.+++..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~ 88 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFM 88 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCccc
Confidence 45678999998 999999999999999999999988654 233332 35566677777777999999998753
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.08 E-value=0.0068 Score=53.18 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=64.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.+.+|+|+|+|.+|.+.+..+...|++|++..++.++..++++++|.. +.+ + +.+....+|+|+.+++.....
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~--~---~~~~~~~aDiVi~atp~~~~~~ 201 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN--S---PEEVIDKVQVIVNTTSVGLKDE 201 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS--C---GGGTGGGCSEEEECSSTTSSTT
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh--h---HHhhhcCCCEEEEeCCCCCCCC
Confidence 578999999999999999999888999999998887776776666632 211 1 112334799999998875310
Q ss_pred --H-HHHHhhccCCEEEEecC
Q 018094 262 --M-PLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 --~-~~~~~l~~~G~~v~~g~ 279 (361)
. .....++++..+++++.
T Consensus 202 ~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 202 DPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp CCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCHHHcCCCCEEEEcCC
Confidence 0 01345677777777765
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.12 Score=46.88 Aligned_cols=132 Identities=14% Similarity=0.141 Sum_probs=83.5
Q ss_pred CEEEEEccchHHHHHHHHHHHC-CCeEEEEe-CCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAM-GVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
-+|.|+|.|.+|...+..++.. +.+++.++ ++.++..++++++|... +.+.+.+.+ ...+|+|+.++....-..
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~~~~~l~-~~~~D~V~i~tp~~~h~~ 81 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DATMEALLA-REDVEMVIITVPNDKHAE 81 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSSHHHHHH-CSSCCEEEECSCTTSHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCCHHHHhc-CCCCCEEEEeCChHHHHH
Confidence 3688999999999888877776 77877554 55556666777888653 334333222 247999999999876566
Q ss_pred HHHHhhccCCEEEEecCCCCCcccChHH-------HhhCCc-EEEecccCCHHHHHHHHHHHHcCCCcee
Q 018094 263 PLIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRK-IVGGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~-~i~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
.+..++..+ +-+++..+ +..+... .-.+++ ...++.......++.+.+++.+|.+-..
T Consensus 82 ~~~~al~~g-k~vl~EKP---~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~iG~i 147 (354)
T 3db2_A 82 VIEQCARSG-KHIYVEKP---ISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEV 147 (354)
T ss_dssp HHHHHHHTT-CEEEEESS---SCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTTCCE
T ss_pred HHHHHHHcC-CEEEEccC---CCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCCCCe
Confidence 677777665 44555332 2222211 122333 3445544444568888899999887543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.027 Score=48.17 Aligned_cols=74 Identities=16% Similarity=0.158 Sum_probs=45.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCC--CHHH---HH---HhcCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR--DQDE---MQ---AAMGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~---~~---~~~~g~d~vid 253 (361)
.++++||.|+ |.+|.+.++.+.. |.+|++++++.++..++.+ ......+..+ +.+. .. +..+++|++|+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 4678999997 9999998888765 8999999998877665533 2221112111 1111 00 11136999999
Q ss_pred cCCCc
Q 018094 254 TVSAV 258 (361)
Q Consensus 254 ~~g~~ 258 (361)
++|..
T Consensus 82 ~Ag~~ 86 (245)
T 3e9n_A 82 AAAVA 86 (245)
T ss_dssp CC---
T ss_pred CCCcC
Confidence 99863
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.07 E-value=0.035 Score=48.49 Aligned_cols=97 Identities=14% Similarity=0.110 Sum_probs=67.5
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEE
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~v 251 (361)
.++.... ...+.+++|+|+|.++.+++..+...|+ +|+++.++.++.++++++++.+ . .. ... ...+|+|
T Consensus 109 ~~l~~~~-~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~-~~-~~~-----~~~~Div 179 (271)
T 1npy_A 109 KLIEKYH-LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-Y-IN-SLE-----NQQADIL 179 (271)
T ss_dssp HHHHHTT-CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-E-ES-CCT-----TCCCSEE
T ss_pred HHHHHhC-CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-c-ch-hhh-----cccCCEE
Confidence 3444433 3456789999999999999999999998 8999999988888888888752 1 11 100 2469999
Q ss_pred EEcCCCcccH-------HHHHHhhccCCEEEEec
Q 018094 252 IDTVSAVHPL-------MPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 252 id~~g~~~~~-------~~~~~~l~~~G~~v~~g 278 (361)
|+++...... ......++++..++++-
T Consensus 180 InaTp~gm~~~~~~~~~~~~~~~l~~~~~v~Dlv 213 (271)
T 1npy_A 180 VNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVV 213 (271)
T ss_dssp EECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECC
T ss_pred EECCCCCccCccccCCCCCCHHHcCCCCEEEEee
Confidence 9998864311 01134566777777774
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.012 Score=50.98 Aligned_cols=75 Identities=15% Similarity=0.073 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHHh----c-
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA----M- 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~---~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~----~- 245 (361)
.++++||.|+ |.+|.+.++.+.. .|++|++++++.++..++.+++ +... ..|-.+.+.+.++ .
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 4678999997 9999999988887 8999999999887766655544 3322 1344555433322 1
Q ss_pred ----CCcc--EEEEcCCC
Q 018094 246 ----GTMD--GIIDTVSA 257 (361)
Q Consensus 246 ----~g~d--~vid~~g~ 257 (361)
+++| ++|+++|.
T Consensus 85 ~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred ccccccCCccEEEECCcc
Confidence 2578 99999884
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.0075 Score=54.22 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=53.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcE-EecCCCHHHHHHhcC--CccEEEEcCCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADS-FLVSRDQDEMQAAMG--TMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~~~~~--g~d~vid~~g~ 257 (361)
.+.+|||+|+ |.+|...++.+...|.+|+++++......+..+.+. ... ..|..+.+.+.++.. ++|+||.+++.
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 98 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA 98 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 4678999998 999999999998889999999986543221111221 221 234555666666655 89999999985
Q ss_pred c
Q 018094 258 V 258 (361)
Q Consensus 258 ~ 258 (361)
.
T Consensus 99 ~ 99 (330)
T 2pzm_A 99 Y 99 (330)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=96.04 E-value=0.023 Score=50.84 Aligned_cols=100 Identities=23% Similarity=0.186 Sum_probs=66.5
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---HcCCcEE-ecCCCHHHHHHhcCCccE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLGADSF-LVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~g~d~ 250 (361)
....++++++||-+|+|. |..+..+++..+ .+|+.++.+++....+.+ +.|...+ +...+........+.+|+
T Consensus 69 ~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~ 147 (317)
T 1dl5_A 69 EWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDV 147 (317)
T ss_dssp HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEE
T ss_pred HhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEE
Confidence 334578999999999876 778888887643 479999988776544322 3354322 112221111112357999
Q ss_pred EEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 251 IIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
|+....-.+....+.+.|+|+|+++..
T Consensus 148 Iv~~~~~~~~~~~~~~~LkpgG~lvi~ 174 (317)
T 1dl5_A 148 IFVTVGVDEVPETWFTQLKEGGRVIVP 174 (317)
T ss_dssp EEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred EEEcCCHHHHHHHHHHhcCCCcEEEEE
Confidence 998877666567888999999998876
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.038 Score=49.50 Aligned_cols=89 Identities=15% Similarity=0.246 Sum_probs=63.0
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
..+|.|+|.|.+|...++.+...|.+|++.+++.++..++ .+.|.... .+ ..+.....|+||-++.....+..
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l-~~~g~~~~---~~---~~e~~~~aDvVi~~vp~~~~~~~ 103 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASL-AALGATIH---EQ---ARAAARDADIVVSMLENGAVVQD 103 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HTTTCEEE---SS---HHHHHTTCSEEEECCSSHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-HHCCCEee---CC---HHHHHhcCCEEEEECCCHHHHHH
Confidence 4589999999999999999999999999999998877666 34465321 11 22334568999999887543444
Q ss_pred HH------HhhccCCEEEEecC
Q 018094 264 LI------GLLKSQGKLVLVGA 279 (361)
Q Consensus 264 ~~------~~l~~~G~~v~~g~ 279 (361)
.+ ..++++..++.++.
T Consensus 104 v~~~~~~~~~l~~~~~vi~~st 125 (320)
T 4dll_A 104 VLFAQGVAAAMKPGSLFLDMAS 125 (320)
T ss_dssp HHTTTCHHHHCCTTCEEEECSC
T ss_pred HHcchhHHhhCCCCCEEEecCC
Confidence 43 24567777777754
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.067 Score=47.41 Aligned_cols=89 Identities=21% Similarity=0.311 Sum_probs=62.0
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
.+|.|+|.|.+|...+..+...|.+|++.+++.++...+ .+.|....... . .+.....|+||-++.....+...
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~~~~-~----~e~~~~aDvvi~~vp~~~~~~~v 81 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANL-LAEGACGAAAS-A----REFAGVVDALVILVVNAAQVRQV 81 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEESS-S----TTTTTTCSEEEECCSSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHcCCccccCC-H----HHHHhcCCEEEEECCCHHHHHHH
Confidence 579999999999999999999999999999998877666 45576541111 1 12234678999888875434444
Q ss_pred H-------HhhccCCEEEEecC
Q 018094 265 I-------GLLKSQGKLVLVGA 279 (361)
Q Consensus 265 ~-------~~l~~~G~~v~~g~ 279 (361)
+ ..++++..++.++.
T Consensus 82 ~~~~~~l~~~l~~g~ivv~~st 103 (303)
T 3g0o_A 82 LFGEDGVAHLMKPGSAVMVSST 103 (303)
T ss_dssp HC--CCCGGGSCTTCEEEECSC
T ss_pred HhChhhHHhhCCCCCEEEecCC
Confidence 3 34566666666653
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.024 Score=49.69 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=64.5
Q ss_pred HhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCC--cEEecCCCHHHHHHhcCCccE
Q 018094 176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGA--DSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~--~~v~~~~~~~~~~~~~~g~d~ 250 (361)
.....++++++||-+|+|. |..+..+++..|.+|+.++.+++....+.+. .|. ...+...+.. .+.+.+|+
T Consensus 57 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~---~~~~~fD~ 132 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE---QFDEPVDR 132 (287)
T ss_dssp HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG---GCCCCCSE
T ss_pred HHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh---hCCCCeeE
Confidence 3344468899999999865 7778888877789999999987765444332 232 1111122221 22367999
Q ss_pred EEEcCCC--------cccHHHHHHhhccCCEEEEec
Q 018094 251 IIDTVSA--------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 278 (361)
|+....- ...+..+.+.|+|+|+++...
T Consensus 133 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 133 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9875221 123667888999999998764
|
| >3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.11 Score=46.32 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=67.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHH----cCCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIER----LGADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+...+++|+|+|.+|...+..++. .+. +|.+..++ +.++++++ +|...... +. .+...++|+|+.|+
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~--~~---~eav~~aDIVi~aT 191 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA--AP---ADIAAQADIVVTAT 191 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC--CH---HHHHHHCSEEEECC
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe--CH---HHHHhhCCEEEEcc
Confidence 567889999999999988877765 455 78888887 44455444 46543222 32 22234599999998
Q ss_pred CCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHH
Q 018094 256 SAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSL 291 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~ 291 (361)
.....+-. ...++++-.++.+|..... .+++...+
T Consensus 192 ~s~~pvl~-~~~l~~G~~V~~vGs~~p~~~El~~~~~ 227 (313)
T 3hdj_A 192 RSTTPLFA-GQALRAGAFVGAIGSSLPHTRELDDEAL 227 (313)
T ss_dssp CCSSCSSC-GGGCCTTCEEEECCCSSTTCCCCCHHHH
T ss_pred CCCCcccC-HHHcCCCcEEEECCCCCCchhhcCHHHH
Confidence 87532211 3568999999999986543 45555543
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.021 Score=52.91 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=55.2
Q ss_pred hCCC-CCCCEEEEEcc-chHHHHHHHHHHH-CCCeEEEEeCCchhH---------------HHHHHHcCCcEE---ecCC
Q 018094 178 YGLD-KPGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKK---------------SEAIERLGADSF---LVSR 236 (361)
Q Consensus 178 ~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~-~g~~Vi~~~~~~~~~---------------~~~~~~~g~~~v---~~~~ 236 (361)
...+ +.++++||.|+ +++|++++..+.. .|++|+++.++.++. .+.+++.|.... .|-.
T Consensus 54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt 133 (422)
T 3s8m_A 54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF 133 (422)
T ss_dssp TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence 3445 46888999997 8999999988888 999999998765431 133456675432 2444
Q ss_pred CHHH-------HHHhc-CCccEEEEcCCC
Q 018094 237 DQDE-------MQAAM-GTMDGIIDTVSA 257 (361)
Q Consensus 237 ~~~~-------~~~~~-~g~d~vid~~g~ 257 (361)
+++. +.+.. +++|++++++|.
T Consensus 134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 134 SDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 4432 22334 679999999876
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.00 E-value=0.021 Score=48.15 Aligned_cols=98 Identities=15% Similarity=0.098 Sum_probs=64.3
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHH---HHcCC--cEEecCCC-HHHHHHhc-----CC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAI---ERLGA--DSFLVSRD-QDEMQAAM-----GT 247 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~---~~~g~--~~v~~~~~-~~~~~~~~-----~g 247 (361)
..++++||-+|+| .|..++.+++.+ +.+|+.++.+++....+. ++.|. ..-+...+ .+.+..+. +.
T Consensus 67 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~ 145 (229)
T 2avd_A 67 LIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGT 145 (229)
T ss_dssp HTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTC
T ss_pred hcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3577899999987 788888999876 569999998876544332 23343 11122223 23333332 57
Q ss_pred ccEEEEcCCCc---ccHHHHHHhhccCCEEEEecC
Q 018094 248 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 248 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 279 (361)
+|+||-..... ..+..+.+.|+++|.++....
T Consensus 146 ~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 146 FDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 99988754432 236778899999999988643
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.009 Score=52.74 Aligned_cols=85 Identities=20% Similarity=0.318 Sum_probs=60.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++... .. ...+ +.++....|+|+-++....
T Consensus 121 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~---~~~~---l~ell~~aDiV~l~~P~t~~t~ 188 (290)
T 3gvx_A 121 YGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV---ISES---PADLFRQSDFVLIAIPLTDKTR 188 (290)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE---ECSS---HHHHHHHCSEEEECCCCCTTTT
T ss_pred ecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------cc---ccCC---hHHHhhccCeEEEEeeccccch
Confidence 5789999999999999999999999999999887654311 11 1112 2233335899988877421
Q ss_pred -cH-HHHHHhhccCCEEEEecC
Q 018094 260 -PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..|+++..+++++.
T Consensus 189 ~li~~~~l~~mk~gailIN~aR 210 (290)
T 3gvx_A 189 GMVNSRLLANARKNLTIVNVAR 210 (290)
T ss_dssp TCBSHHHHTTCCTTCEEEECSC
T ss_pred hhhhHHHHhhhhcCceEEEeeh
Confidence 11 456778899999998874
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.081 Score=47.77 Aligned_cols=129 Identities=16% Similarity=0.156 Sum_probs=80.8
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEe-CCchhHHHHHHHcCCcEEecCCCHHHHHHhc--CCccEEEEcCCCcccH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPL 261 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~g~d~vid~~g~~~~~ 261 (361)
+|.|+|+|.+|...+..++.. +.+++.++ ++.++...+++++|.. ++ .+. .++. ..+|+|+.++......
T Consensus 6 rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~-~~--~~~---~~~l~~~~~D~V~i~tp~~~h~ 79 (344)
T 3euw_A 6 RIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAE-AV--ASP---DEVFARDDIDGIVIGSPTSTHV 79 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCE-EE--SSH---HHHTTCSCCCEEEECSCGGGHH
T ss_pred EEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCc-ee--CCH---HHHhcCCCCCEEEEeCCchhhH
Confidence 688999999999888877776 67877554 4555566667778843 22 222 2333 3799999999887656
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHH-------HhhCCc-EEEecccCCHHHHHHHHHHHHcCCCcee
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRK-IVGGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~-~i~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
..+..++..+ +-+++..+ +..+... .-.+++ -..++.......+..+.+++.+|.+-..
T Consensus 80 ~~~~~al~~g-k~v~~EKP---~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 146 (344)
T 3euw_A 80 DLITRAVERG-IPALCEKP---IDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGNL 146 (344)
T ss_dssp HHHHHHHHTT-CCEEECSC---SCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred HHHHHHHHcC-CcEEEECC---CCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCCCce
Confidence 6677777665 44555332 2222211 122333 3344444444568888899999887543
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.95 E-value=0.019 Score=47.57 Aligned_cols=70 Identities=24% Similarity=0.332 Sum_probs=50.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE--ecCCCHHHHHHhc---CCccEEEEcCCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF--LVSRDQDEMQAAM---GTMDGIIDTVSA 257 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~---~g~d~vid~~g~ 257 (361)
.++||.|+ |.+|...++.+... +|++++++.++..++.++++. .. .|..+.+.+.++. +++|++|.++|.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 36899998 99999888877666 999999988776666555543 22 2445555555543 389999999885
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.18 Score=45.80 Aligned_cols=131 Identities=17% Similarity=0.156 Sum_probs=82.6
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
+|.|+|.|.+|...+..++.. +++++.+++.+..+.+.++++|... +.+.+.+.+ ...+|+|+.|+....-...+
T Consensus 7 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~~~~~~ll~-~~~~D~V~i~tp~~~h~~~~ 82 (359)
T 3e18_A 7 QLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---YESYEAVLA-DEKVDAVLIATPNDSHKELA 82 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---CSCHHHHHH-CTTCCEEEECSCGGGHHHHH
T ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---eCCHHHHhc-CCCCCEEEEcCCcHHHHHHH
Confidence 588999999999888887776 6788877665554445556777632 334333222 24799999999887656677
Q ss_pred HHhhccCCEEEEecCCCCCcccChHH---H----hhCCcE-EEecccCCHHHHHHHHHHHHcCCCcee
Q 018094 265 IGLLKSQGKLVLVGAPEKPLELPAFS---L----LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 265 ~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~~~~-i~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
..+++.| +-|++-. ++..+... + -.+++. ..++.......+..+.+++.+|.+-..
T Consensus 83 ~~al~aG-khVl~EK---P~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 146 (359)
T 3e18_A 83 ISALEAG-KHVVCEK---PVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEM 146 (359)
T ss_dssp HHHHHTT-CEEEEES---SCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTTSSE
T ss_pred HHHHHCC-CCEEeeC---CCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCCCCe
Confidence 7777765 5555633 22222221 1 123333 344444444568888899999887543
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.022 Score=50.37 Aligned_cols=87 Identities=21% Similarity=0.252 Sum_probs=60.8
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 265 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~ 265 (361)
+|.|+|+|.+|...+..+...|.+|++.+++.++...+ ++.|... ..+.+ +...++|+||.++.....+...+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-~~~g~~~---~~~~~---~~~~~~D~vi~~v~~~~~~~~~~ 79 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV-IAAGAET---ASTAK---AIAEQCDVIITMLPNSPHVKEVA 79 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHHHH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-HHCCCee---cCCHH---HHHhCCCEEEEECCCHHHHHHHH
Confidence 68999999999999998888899999998887776665 3446432 22222 12235899999998654344444
Q ss_pred -------HhhccCCEEEEecC
Q 018094 266 -------GLLKSQGKLVLVGA 279 (361)
Q Consensus 266 -------~~l~~~G~~v~~g~ 279 (361)
..++++..++.++.
T Consensus 80 ~~~~~l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 80 LGENGIIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HSTTCHHHHCCTTCEEEECSC
T ss_pred hCcchHhhcCCCCCEEEECCC
Confidence 45677777777743
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.023 Score=52.00 Aligned_cols=76 Identities=18% Similarity=0.124 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHH-HcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIE-RLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~-~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
.+.+|||+|+ |.+|...++.+...| .+|+++++...+..+..+ .-+...+ .|..+.+.+.++..++|+||.+++..
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~ 110 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYH 110 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCcc
Confidence 3568999998 999999999999999 999999887654211111 0011211 24455666777777999999999864
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.014 Score=50.27 Aligned_cols=76 Identities=20% Similarity=0.240 Sum_probs=50.6
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEe-CCchhHHHHH---HHcCCcE---EecCCCHHHHHHh-------cC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAI---ERLGADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~-~~~~~~~~~~---~~~g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.++++|||.|+ |++|...+..+...|++|++++ ++.++..+.. ++.+... ..|-.+.+.+.++ .+
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 46788999997 9999999999999999999988 4444433332 2334322 1344554433322 24
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++|.++|.
T Consensus 91 ~id~lv~~Ag~ 101 (256)
T 3ezl_A 91 EIDVLVNNAGI 101 (256)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999885
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.18 Score=45.59 Aligned_cols=132 Identities=14% Similarity=0.050 Sum_probs=83.0
Q ss_pred CEEEEEccchHHHHHHHHHHHC--CCeEEEEe-CCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAM--GVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
-+|.|+|+|.+|...+..++.. +.+++.++ ++.++..++.+++|. .+ +.+.+.+.+ ...+|+|+.++....-.
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~--~~~~~~ll~-~~~~D~V~i~tp~~~h~ 89 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RG--HASLTDMLA-QTDADIVILTTPSGLHP 89 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EE--ESCHHHHHH-HCCCSEEEECSCGGGHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ce--eCCHHHHhc-CCCCCEEEECCCcHHHH
Confidence 4689999999998888777766 67877554 555566677778886 32 233333222 14799999999887546
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcEE-EecccCCHHHHHHHHHHHHcCCCcee
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
..+..+++.+ +-+.+.. ++..+... .-.+++.+ .++.......+..+.+++.+|.+-..
T Consensus 90 ~~~~~al~~g-k~v~~EK---P~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 156 (354)
T 3q2i_A 90 TQSIECSEAG-FHVMTEK---PMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRI 156 (354)
T ss_dssp HHHHHHHHTT-CEEEECS---SSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTCSE
T ss_pred HHHHHHHHCC-CCEEEeC---CCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCCCce
Confidence 6677777665 5556643 22222211 12233433 45544444568888899999987644
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.21 Score=45.04 Aligned_cols=131 Identities=18% Similarity=0.211 Sum_probs=83.3
Q ss_pred EEEEEccchHHHH-HHHHHHHC-CCeEEEEeCC-chhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVISTS-PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 186 ~VlI~Gag~vG~~-a~~la~~~-g~~Vi~~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
++-|+|+|.+|.. .+..++.. +++++.+++. .++.+++++++|...++ .+.+.+.+ ...+|+|+-++....-..
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y--~d~~ell~-~~~iDaV~I~tP~~~H~~ 101 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAF--GSYEEMLA-SDVIDAVYIPLPTSQHIE 101 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEE--SSHHHHHH-CSSCSEEEECSCGGGHHH
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeee--CCHHHHhc-CCCCCEEEEeCCCchhHH
Confidence 6889999999975 35555554 7788876655 45667788899976553 33333222 247999999988865466
Q ss_pred HHHHhhccCCEEEEecCCCCCcccChH---HH----hhCCcE-EEecccCCHHHHHHHHHHHHcCCCce
Q 018094 263 PLIGLLKSQGKLVLVGAPEKPLELPAF---SL----LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRA 323 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~----~~~~~~-i~g~~~~~~~~~~~~~~~l~~~~l~~ 323 (361)
.+..+|+. |+-|++-. ++..+.. .+ -.+++. ..++.......+..+-+++.+|.|-.
T Consensus 102 ~~~~al~a-GkhVl~EK---Pla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~iG~ 166 (350)
T 4had_A 102 WSIKAADA-GKHVVCEK---PLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAIGS 166 (350)
T ss_dssp HHHHHHHT-TCEEEECS---CCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTTSS
T ss_pred HHHHHHhc-CCEEEEeC---CcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCCCc
Confidence 67777765 56677744 3322221 11 123333 34544444456888889999987753
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.011 Score=49.90 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=64.0
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVH 259 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-~~g~d~vid~~g~~~ 259 (361)
++++.+||-+|+|. |..+..+++. +++|+.++.++.....+.+...--.++..+-.+.+... .+.+|+|+....-..
T Consensus 46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~ 123 (226)
T 3m33_A 46 LTPQTRVLEAGCGH-GPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTS 123 (226)
T ss_dssp CCTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSG
T ss_pred CCCCCeEEEeCCCC-CHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHH
Confidence 36788999999853 6667777776 88999999988766555333222222221111111111 347999998876666
Q ss_pred cHHHHHHhhccCCEEEEec
Q 018094 260 PLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g 278 (361)
.+..+.+.|+|+|+++..+
T Consensus 124 ~l~~~~~~LkpgG~l~~~~ 142 (226)
T 3m33_A 124 VILRLPELAAPDAHFLYVG 142 (226)
T ss_dssp GGGGHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEeC
Confidence 7888999999999999443
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0056 Score=53.35 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=53.7
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
+++|||+|+ |.+|...++.+...|.+|++++++..+.. ..+... ..|-.+.+.+.++..++|++|.++|.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~ 74 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGI 74 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence 457999997 99999999999889999999998876432 112222 23556677778877899999999875
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=95.90 E-value=0.056 Score=46.62 Aligned_cols=85 Identities=14% Similarity=0.249 Sum_probs=62.2
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 265 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~ 265 (361)
+|.|+|+|.+|...+..+...|.+|.+.+++.++...+.+++|... ..+.+ +....+|+||.++... .....+
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~---~~~~~~D~Vi~~v~~~-~~~~v~ 77 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AMSHQ---DLIDQVDLVILGIKPQ-LFETVL 77 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CSSHH---HHHHTCSEEEECSCGG-GHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eCCHH---HHHhcCCEEEEEeCcH-hHHHHH
Confidence 6889999999999988888888899999888887777766677542 22222 2223689999999844 366777
Q ss_pred HhhccCCEEEEe
Q 018094 266 GLLKSQGKLVLV 277 (361)
Q Consensus 266 ~~l~~~G~~v~~ 277 (361)
..++++..++..
T Consensus 78 ~~l~~~~~vv~~ 89 (259)
T 2ahr_A 78 KPLHFKQPIISM 89 (259)
T ss_dssp TTSCCCSCEEEC
T ss_pred HHhccCCEEEEe
Confidence 777766666655
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.013 Score=48.33 Aligned_cols=98 Identities=16% Similarity=0.160 Sum_probs=63.6
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHH---HHcCC--cEEecCCCHHHHH-HhcCCccEEE
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAI---ERLGA--DSFLVSRDQDEMQ-AAMGTMDGII 252 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~---~~~g~--~~v~~~~~~~~~~-~~~~g~d~vi 252 (361)
++++++||-+|+|. |..+..+++..+ .+|+.++.+++....+. ++.|. ..-+...+...+. ...+.+|+|+
T Consensus 20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 58899999999865 777888888754 59999998876543332 23343 1222233322222 2234799998
Q ss_pred EcCCC---------------cccHHHHHHhhccCCEEEEecC
Q 018094 253 DTVSA---------------VHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 253 d~~g~---------------~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
-..+- ...+..+.+.|+++|+++.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 65432 1347788899999999987753
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=95.89 E-value=0.021 Score=51.38 Aligned_cols=72 Identities=11% Similarity=0.021 Sum_probs=49.3
Q ss_pred EEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEE-ecCCC-HHHHHHhcCCccEEEEcCCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSF-LVSRD-QDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~-~~~~~~~~~g~d~vid~~g~ 257 (361)
+|||+|+ |.+|...++.+... |.+|++++++.++...+.+..+...+ .|..+ .+.+.++..++|+||.+++.
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~ 77 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 77 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccc
Confidence 6899998 99999999998887 89999999987654322111122222 23333 23455555589999999875
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.016 Score=49.93 Aligned_cols=98 Identities=12% Similarity=0.085 Sum_probs=63.5
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHH---HHcCCc--EEecCCCH-HHHHHhcC--CccE
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQ-DEMQAAMG--TMDG 250 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~---~~~g~~--~v~~~~~~-~~~~~~~~--g~d~ 250 (361)
..++.+||-+|+|. |..+..+++.+ +.+|+.++.+++....+. ++.|.. ..+...+. +.+....+ .+|+
T Consensus 61 ~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~ 139 (248)
T 3tfw_A 61 LTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDL 139 (248)
T ss_dssp HHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSE
T ss_pred hcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEE
Confidence 35778999999864 77888888886 569999998877554332 233543 11222332 33333333 7999
Q ss_pred EEEcCCCc---ccHHHHHHhhccCCEEEEecC
Q 018094 251 IIDTVSAV---HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 251 vid~~g~~---~~~~~~~~~l~~~G~~v~~g~ 279 (361)
||-..... ..+..+.+.|+|+|.++.-..
T Consensus 140 V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 140 IFIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp EEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 99543332 246678889999998887543
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.035 Score=49.45 Aligned_cols=89 Identities=21% Similarity=0.212 Sum_probs=62.0
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
-.+|.|+|.|.+|...++.+...|.+|++.+++.++...+ .+.|... ..+.. +.....|+||-++.....+..
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l-~~~g~~~---~~~~~---~~~~~aDvvi~~vp~~~~~~~ 93 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDEL-VEHGASV---CESPA---EVIKKCKYTIAMLSDPCAALS 93 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-HHTTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHCCCeE---cCCHH---HHHHhCCEEEEEcCCHHHHHH
Confidence 3579999999999999999999999999999998887766 4566532 12221 222347999998877543444
Q ss_pred HH-------HhhccCCEEEEecC
Q 018094 264 LI-------GLLKSQGKLVLVGA 279 (361)
Q Consensus 264 ~~-------~~l~~~G~~v~~g~ 279 (361)
.+ ..++++..++.++.
T Consensus 94 v~~~~~~l~~~l~~g~~vv~~st 116 (310)
T 3doj_A 94 VVFDKGGVLEQICEGKGYIDMST 116 (310)
T ss_dssp HHHSTTCGGGGCCTTCEEEECSC
T ss_pred HHhCchhhhhccCCCCEEEECCC
Confidence 44 34556666766654
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.061 Score=49.42 Aligned_cols=82 Identities=17% Similarity=0.095 Sum_probs=54.7
Q ss_pred HhhCCC-CCCCEEEEEcc-chHHHHHHHHHHH-CCCeEEEEeCCchhH---------------HHHHHHcCCcEE---ec
Q 018094 176 RFYGLD-KPGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKK---------------SEAIERLGADSF---LV 234 (361)
Q Consensus 176 ~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~-~g~~Vi~~~~~~~~~---------------~~~~~~~g~~~v---~~ 234 (361)
+..+.+ ..++++||.|+ +++|++.+..+.. .|++|+++.+..+.. .+.+++.|.... .|
T Consensus 38 ~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~D 117 (405)
T 3zu3_A 38 TTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGD 117 (405)
T ss_dssp HHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred HhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECC
Confidence 334444 56788899997 8999999888888 999999987654421 223355665432 24
Q ss_pred CCCHHHHHH-------hcCCccEEEEcCCC
Q 018094 235 SRDQDEMQA-------AMGTMDGIIDTVSA 257 (361)
Q Consensus 235 ~~~~~~~~~-------~~~g~d~vid~~g~ 257 (361)
-.+++.+.+ ..+++|++++++|.
T Consensus 118 vtd~~~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 118 AFSDEIKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp TTSHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 445443322 23579999999886
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.87 E-value=0.012 Score=51.13 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~g~d~vid 253 (361)
.++++||.|+ |.+|.+.+..+...|++|++++++.++... ..... ..|-.+.+.+.++ .+++|++|+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 5688999997 999999999999999999999988654321 11211 1344555443332 247999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
++|.
T Consensus 103 nAg~ 106 (260)
T 3un1_A 103 NAGV 106 (260)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=95.81 E-value=0.0082 Score=51.49 Aligned_cols=71 Identities=20% Similarity=0.160 Sum_probs=47.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc-----CCccEEEEcC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTV 255 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~-~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-----~g~d~vid~~ 255 (361)
.++++||.|+ |++|.+.++.+.. .|++|+++.+..+... ++. .....|-.+.+.+.++. +++|++++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---~~~-~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---ENL-KFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---TTE-EEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc---ccc-eEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 4678999998 9999999877766 7889988887654211 011 01123445554444332 3799999999
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
|.
T Consensus 79 g~ 80 (244)
T 4e4y_A 79 GI 80 (244)
T ss_dssp CC
T ss_pred cc
Confidence 86
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.02 Score=51.92 Aligned_cols=74 Identities=22% Similarity=0.204 Sum_probs=52.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcEE-ecCCCHHHHHHhcC--CccEEEEcC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF-LVSRDQDEMQAAMG--TMDGIIDTV 255 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~v-~~~~~~~~~~~~~~--g~d~vid~~ 255 (361)
+.+|||+|+ |.+|...++.+...|.+|++++++.++...+.+.+ +...+ .|..+.+.+.++.. ++|+||.++
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 88 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHMA 88 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEECC
Confidence 568999998 99999999999999999999998766543332322 22222 34455555555544 489999999
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
+.
T Consensus 89 ~~ 90 (357)
T 1rkx_A 89 AQ 90 (357)
T ss_dssp SC
T ss_pred CC
Confidence 84
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.019 Score=50.32 Aligned_cols=91 Identities=18% Similarity=0.200 Sum_probs=61.4
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCC-ccEEEEcCCCcc--
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGT-MDGIIDTVSAVH-- 259 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g-~d~vid~~g~~~-- 259 (361)
+.+|||+|+|.+|...+..+...|.+|++++++.++. .-+...+ .|..+.+.+.++..+ +|+||.+++...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~ 77 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS 77 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence 3579999999999999999999999999999986642 1233332 344555555444445 999999876421
Q ss_pred ----------cHHHHHHhhccC--CEEEEecC
Q 018094 260 ----------PLMPLIGLLKSQ--GKLVLVGA 279 (361)
Q Consensus 260 ----------~~~~~~~~l~~~--G~~v~~g~ 279 (361)
.....++.++.. ++++.++.
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS 109 (286)
T 3gpi_A 78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS 109 (286)
T ss_dssp -----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence 133455555543 47887764
|
| >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.059 Score=48.23 Aligned_cols=130 Identities=12% Similarity=0.093 Sum_probs=79.1
Q ss_pred EEEEEccchHHH-HHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 186 HVGVVGLGGLGH-VAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 186 ~VlI~Gag~vG~-~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+|.|+|+|.+|. ..+..++.. +.++++.+++.++..++++++|....+ .+..+. +...+|+|+.++........
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~-~~~~~~---l~~~~D~V~i~tp~~~h~~~ 79 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATC-TDYRDV---LQYGVDAVMIHAATDVHSTL 79 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCC-SSTTGG---GGGCCSEEEECSCGGGHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccc-cCHHHH---hhcCCCEEEEECCchhHHHH
Confidence 588999999997 466655544 678886666667777777888865311 111222 23479999999987654566
Q ss_pred HHHhhccCCEEEEecCCCCCcccChH------HH-hhCCcE-EEecccCCHHHHHHHHHHHHcCCCce
Q 018094 264 LIGLLKSQGKLVLVGAPEKPLELPAF------SL-LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRA 323 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~~~~~~~------~~-~~~~~~-i~g~~~~~~~~~~~~~~~l~~~~l~~ 323 (361)
+..+++.+ +-+.+.. ++..+.. .+ -.+++. +.++.......+..+.+++.+|.+-.
T Consensus 80 ~~~al~~G-k~V~~EK---P~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~ 143 (323)
T 1xea_A 80 AAFFLHLG-IPTFVDK---PLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQQECGA 143 (323)
T ss_dssp HHHHHHTT-CCEEEES---CSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHHHTSCTT
T ss_pred HHHHHHCC-CeEEEeC---CCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHhcCCcCC
Confidence 66777664 4444532 2222221 11 224443 34444444456788888898987643
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.022 Score=49.50 Aligned_cols=75 Identities=16% Similarity=0.263 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHH---cCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAIER---LGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~-~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
.++++||.|+ |.+|...++.+...|++|+++.. +.++..+..++ .+... ..|-.+.+.+.+. .++
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA 104 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4678999997 99999999999999999977654 44444333333 23322 1344555443332 247
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
+|++|+++|.
T Consensus 105 id~li~nAg~ 114 (267)
T 4iiu_A 105 WYGVVSNAGI 114 (267)
T ss_dssp CSEEEECCCC
T ss_pred ccEEEECCCC
Confidence 9999999885
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.028 Score=46.82 Aligned_cols=100 Identities=15% Similarity=0.053 Sum_probs=64.3
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcC
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
....++++.+||-+|+|. |..+..+++. |.+++.++.+++....+ ++.+... -+...+.... ...+.+|+|+...
T Consensus 40 ~l~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~~D~s~~~~~~a-~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~ 115 (218)
T 3ou2_A 40 RLRAGNIRGDVLELASGT-GYWTRHLSGL-ADRVTALDGSAEMIAEA-GRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAH 115 (218)
T ss_dssp HHTTTTSCSEEEEESCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHH-GGGCCTTEEEEECCTTSC-CCSSCEEEEEEES
T ss_pred HHhcCCCCCeEEEECCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHH-HhcCCCCeEEEecccccC-CCCCceeEEEEec
Confidence 344467888999999864 6677777777 88999999887765444 5555221 1212221111 1234799999764
Q ss_pred CC--------cccHHHHHHhhccCCEEEEecCC
Q 018094 256 SA--------VHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 256 g~--------~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.- ...+..+.+.|+++|.++.....
T Consensus 116 ~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 148 (218)
T 3ou2_A 116 WLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVT 148 (218)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 33 22356778899999999887543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=95.73 E-value=0.031 Score=49.74 Aligned_cols=72 Identities=15% Similarity=0.150 Sum_probs=50.8
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcC--CccEEEEcCCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMG--TMDGIIDTVSA 257 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~--g~d~vid~~g~ 257 (361)
++..+|||+|+ |.+|...++.+...|.+|+++++..++ .. ++...+ .|..+.+.+.++.. ++|+||.+++.
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 56788999998 999999999999999999999987654 11 233222 24455555555543 49999999886
Q ss_pred c
Q 018094 258 V 258 (361)
Q Consensus 258 ~ 258 (361)
.
T Consensus 85 ~ 85 (321)
T 2pk3_A 85 S 85 (321)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.72 E-value=0.19 Score=45.89 Aligned_cols=133 Identities=16% Similarity=0.116 Sum_probs=83.1
Q ss_pred EEEEEccchHHHHHHHHHHH--------CCCeEEEEeCC-chhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 186 HVGVVGLGGLGHVAVKFAKA--------MGVKVTVISTS-PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~--------~g~~Vi~~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
+|.|+|+|.+|...+..++. -+++++.+++. .++..++++++|...++ .+.+.+.+ ...+|+|+-++.
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y--~d~~ell~-~~~iDaV~IatP 103 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT--ADWRALIA-DPEVDVVSVTTP 103 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE--SCHHHHHH-CTTCCEEEECSC
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec--CCHHHHhc-CCCCcEEEECCC
Confidence 68899999999876654432 25688777665 45667788899986553 33333222 247999999988
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCCcccChHH---H----hhCCcE-EEecccCCHHHHHHHHHHHHcCCCceee
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS---L----LMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~---~----~~~~~~-i~g~~~~~~~~~~~~~~~l~~~~l~~~~ 325 (361)
...-...+..+|+. |+-|++ ..++..+... + -.+++. ..++.......+..+-+++.+|.+-...
T Consensus 104 ~~~H~~~a~~al~a-GkhVl~---EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~iG~i~ 176 (393)
T 4fb5_A 104 NQFHAEMAIAALEA-GKHVWC---EKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVIGRVN 176 (393)
T ss_dssp GGGHHHHHHHHHHT-TCEEEE---CSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTTCSEE
T ss_pred hHHHHHHHHHHHhc-CCeEEE---ccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCCcccc
Confidence 76546667777765 666777 4444433322 1 223333 3444433345577788888888776543
|
| >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.19 Score=45.32 Aligned_cols=132 Identities=19% Similarity=0.244 Sum_probs=82.2
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEE-eCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVI-STSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+|.|+|.|.+|...+..++.. +.+++.+ +++.++..++.+++|...++ .+.+.+.+ ...+|+|+.++........
T Consensus 4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~--~~~~~ll~-~~~~D~V~i~tp~~~h~~~ 80 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAY--KDPHELIE-DPNVDAVLVCSSTNTHSEL 80 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEE--SSHHHHHH-CTTCCEEEECSCGGGHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCcee--CCHHHHhc-CCCCCEEEEcCCCcchHHH
Confidence 588999999998877776654 6687755 45556666777888865443 23332222 2379999999988765666
Q ss_pred HHHhhccCCEEEEecCCCCCcccChHH-------HhhCCc-EEEecccCCHHHHHHHHHHHHcCCCcee
Q 018094 264 LIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRK-IVGGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~-~i~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
+..++..+ +-+++..+ +..+... .-.+++ -..++.......+..+.+++.+|.+-..
T Consensus 81 ~~~al~~g-k~v~~EKP---~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i 145 (344)
T 3ezy_A 81 VIACAKAK-KHVFCEKP---LSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTIGKP 145 (344)
T ss_dssp HHHHHHTT-CEEEEESC---SCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTTSSE
T ss_pred HHHHHhcC-CeEEEECC---CCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCCCCe
Confidence 77777665 44556432 2222211 112333 3445544444668888899999887643
|
| >2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A* | Back alignment and structure |
|---|
Probab=95.69 E-value=0.027 Score=48.59 Aligned_cols=95 Identities=19% Similarity=0.141 Sum_probs=59.0
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC---------------------cEEecCCCHH
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA---------------------DSFLVSRDQD 239 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~---------------------~~v~~~~~~~ 239 (361)
.+++.+||.+|+| .|..+..|++. |.+|+.++-++.....+.++.+. ..-+...+..
T Consensus 66 ~~~~~~vLD~GCG-~G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 66 GQSGLRVFFPLCG-KAIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp TCCSCEEEETTCT-TCTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCCeEEEeCCC-CcHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 3578899999885 36666667765 89999999998876655444431 1111111211
Q ss_pred HHHHh-cCCccEEEEcCCCc--------ccHHHHHHhhccCCEEEEe
Q 018094 240 EMQAA-MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 240 ~~~~~-~~g~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~ 277 (361)
.+... .+.||+|++...-. ..+..+.+.|+|+|+++++
T Consensus 144 ~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 144 DLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred cCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 11111 15799999853221 1245677889999998654
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.67 E-value=0.025 Score=49.66 Aligned_cols=62 Identities=18% Similarity=0.180 Sum_probs=45.8
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcC--CccEEEEcCCCc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSAV 258 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~--g~d~vid~~g~~ 258 (361)
++..+|||+|+ |.+|...+..+...|.+|+++++.. .|..+.+.+.++.. ++|+||.+++..
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 74 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHT 74 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhcCCCEEEECCccC
Confidence 46678999998 9999999999988899999988751 23344444544443 789999998853
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=95.67 E-value=0.021 Score=51.09 Aligned_cols=88 Identities=19% Similarity=0.320 Sum_probs=59.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.+++.+... +..... ....+.++....|+|+-++....
T Consensus 138 ~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~---~~~~l~ell~~aDiV~l~~Plt~~t~ 208 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWP------GVESYV---GREELRAFLNQTRVLINLLPNTAQTV 208 (315)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCT------TCEEEE---SHHHHHHHHHTCSEEEECCCCCGGGT
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhh------hhhhhc---ccCCHHHHHhhCCEEEEecCCchhhh
Confidence 588999999999999999999999999999988765321 121111 11334444456788877765321
Q ss_pred -cH-HHHHHhhccCCEEEEecC
Q 018094 260 -PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..|+++..+++++.
T Consensus 209 ~li~~~~l~~mk~gailIN~aR 230 (315)
T 3pp8_A 209 GIINSELLDQLPDGAYVLNLAR 230 (315)
T ss_dssp TCBSHHHHTTSCTTEEEEECSC
T ss_pred hhccHHHHhhCCCCCEEEECCC
Confidence 12 455667777777777764
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.65 E-value=0.074 Score=46.66 Aligned_cols=90 Identities=23% Similarity=0.234 Sum_probs=58.3
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc------------CCcE---------EecCCCHHHHHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL------------GADS---------FLVSRDQDEMQA 243 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~------------g~~~---------v~~~~~~~~~~~ 243 (361)
++|.|+|+|.+|...++.+...|.+|++.++++++...+.+.+ +.+. +... ..+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~---~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS---DDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE---SCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe---CCHHH
Confidence 5799999999999999999999999999999988765554331 1110 0000 11223
Q ss_pred hcCCccEEEEcCCCcc-----cHHHHHHhhccCCEEEEe
Q 018094 244 AMGTMDGIIDTVSAVH-----PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 244 ~~~g~d~vid~~g~~~-----~~~~~~~~l~~~G~~v~~ 277 (361)
...++|+||+++.... .+......++++..++..
T Consensus 82 ~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 82 AVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 3457999999998752 122333445666655544
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=95.64 E-value=0.059 Score=48.30 Aligned_cols=88 Identities=19% Similarity=0.231 Sum_probs=60.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.+++.+... .....+...+ +.++....|+|+-++....
T Consensus 136 ~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~------~~~~~~~~~~---l~ell~~aDvV~l~lPlt~~t~ 206 (324)
T 3evt_A 136 TGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD------HFHETVAFTA---TADALATANFIVNALPLTPTTH 206 (324)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCT------TCSEEEEGGG---CHHHHHHCSEEEECCCCCGGGT
T ss_pred cCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhH------hHhhccccCC---HHHHHhhCCEEEEcCCCchHHH
Confidence 588999999999999999999999999999988765321 1122221111 2223335788888765321
Q ss_pred --cHHHHHHhhccCCEEEEecC
Q 018094 260 --PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~ 279 (361)
.-...+..|+++..+++++.
T Consensus 207 ~li~~~~l~~mk~gailIN~aR 228 (324)
T 3evt_A 207 HLFSTELFQQTKQQPMLINIGR 228 (324)
T ss_dssp TCBSHHHHHTCCSCCEEEECSC
T ss_pred HhcCHHHHhcCCCCCEEEEcCC
Confidence 12456777888888888874
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.041 Score=44.65 Aligned_cols=97 Identities=12% Similarity=0.177 Sum_probs=62.1
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCc--EEecCCCHHHHHHh-cCCccEEEE
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAA-MGTMDGIID 253 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~--~v~~~~~~~~~~~~-~~g~d~vid 253 (361)
.++++++||=+|+|. |..+..+++. +.+|+.++.+++....+. ++.|.+ .++. .+.+.+... .+.+|+|+-
T Consensus 19 ~~~~~~~vLDiGcG~-G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 19 VLDDESIVVDATMGN-GNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp TCCTTCEEEESCCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEE
T ss_pred hCCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEE
Confidence 367899999888864 7777778877 889999999887654332 233432 2222 332222222 346999986
Q ss_pred cCCCc---------------ccHHHHHHhhccCCEEEEecC
Q 018094 254 TVSAV---------------HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 254 ~~g~~---------------~~~~~~~~~l~~~G~~v~~g~ 279 (361)
..+.- ..+..+.+.|+|+|+++.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 53221 124667789999999988744
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.64 E-value=0.069 Score=47.68 Aligned_cols=90 Identities=20% Similarity=0.105 Sum_probs=63.0
Q ss_pred CEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHH-hcCCccEEEEcCCCccc
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQA-AMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~-~~~g~d~vid~~g~~~~ 260 (361)
.+|.|+|.|.+|...++.++..|. +|++.++++++...+ +++|.. ..... . .+ ...++|+||.|+.....
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a-~~~G~~~~~~~~-~----~~~~~~~aDvVilavp~~~~ 107 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTS-I----AKVEDFSPDFVMLSSPVRTF 107 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESC-T----TGGGGGCCSEEEECSCGGGH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH-HHCCCcchhcCC-H----HHHhhccCCEEEEeCCHHHH
Confidence 579999999999999999999998 999999988776554 567762 22211 1 12 33568999999887542
Q ss_pred ---HHHHHHhhccCCEEEEecCC
Q 018094 261 ---LMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 261 ---~~~~~~~l~~~G~~v~~g~~ 280 (361)
+......++++..++.++..
T Consensus 108 ~~vl~~l~~~l~~~~iv~d~~Sv 130 (314)
T 3ggo_A 108 REIAKKLSYILSEDATVTDQGSV 130 (314)
T ss_dssp HHHHHHHHHHSCTTCEEEECCSC
T ss_pred HHHHHHHhhccCCCcEEEECCCC
Confidence 22233456677777777654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=95.63 E-value=0.04 Score=47.73 Aligned_cols=75 Identities=23% Similarity=0.298 Sum_probs=51.2
Q ss_pred CCCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCchhH-H----HHHHHcCCcEE---ecCCCHHHHHHh-------
Q 018094 183 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKK-S----EAIERLGADSF---LVSRDQDEMQAA------- 244 (361)
Q Consensus 183 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~~~-~----~~~~~~g~~~v---~~~~~~~~~~~~------- 244 (361)
.++++||.|+ +++|...++.+...|++|++++++.++. . ++.++.+.... .|-.+.+.+.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD 98 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 5788999985 4999999999999999999998876543 2 22233454322 244444433322
Q ss_pred cCCccEEEEcCCC
Q 018094 245 MGTMDGIIDTVSA 257 (361)
Q Consensus 245 ~~g~d~vid~~g~ 257 (361)
.+++|++|+++|.
T Consensus 99 ~g~id~li~nAg~ 111 (267)
T 3gdg_A 99 FGQIDAFIANAGA 111 (267)
T ss_dssp TSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 3479999999985
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=95.61 E-value=0.043 Score=46.44 Aligned_cols=97 Identities=15% Similarity=0.142 Sum_probs=62.9
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCC--cEEecCCCHHH---HHHhcCCccEEEE
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDE---MQAAMGTMDGIID 253 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~---~~~~~~g~d~vid 253 (361)
.++++++||-+|+|. |..+..+++..| .+|+.++.+++....+.+.... ...+...+... .....+.+|+|+.
T Consensus 71 ~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (230)
T 1fbn_A 71 PIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE 149 (230)
T ss_dssp CCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEE
T ss_pred CCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEE
Confidence 357899999999876 888888998876 5999999988765444332211 11111111111 0111246999996
Q ss_pred cCCCc---c-cHHHHHHhhccCCEEEEe
Q 018094 254 TVSAV---H-PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 254 ~~g~~---~-~~~~~~~~l~~~G~~v~~ 277 (361)
..... . .+..+.+.|+|+|+++..
T Consensus 150 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 55443 2 267788899999999886
|
| >1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=95.58 E-value=0.019 Score=51.77 Aligned_cols=87 Identities=25% Similarity=0.322 Sum_probs=63.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.|.+|.|+|.|.+|...++.++.+|++|++.++..++. + ++. .. ..+. .++....|+|+.++.....
T Consensus 144 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~----~~~l---~ell~~aDvV~~~~P~~~~t~ 212 (333)
T 1dxy_A 144 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPD-FD----YVSL---EDLFKQSDVIDLHVPGIEQNT 212 (333)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTT-CE----ECCH---HHHHHHCSEEEECCCCCGGGT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhc-cc----cCCH---HHHHhcCCEEEEcCCCchhHH
Confidence 57899999999999999999999999999998876542 1 111 21 1122 2333458999998876431
Q ss_pred --H-HHHHHhhccCCEEEEecCC
Q 018094 261 --L-MPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 261 --~-~~~~~~l~~~G~~v~~g~~ 280 (361)
+ ...+..|++++.+++++..
T Consensus 213 ~li~~~~l~~mk~ga~lIn~srg 235 (333)
T 1dxy_A 213 HIINEAAFNLMKPGAIVINTARP 235 (333)
T ss_dssp TSBCHHHHHHSCTTEEEEECSCT
T ss_pred HHhCHHHHhhCCCCcEEEECCCC
Confidence 2 4577889999999999763
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=95.58 E-value=0.066 Score=43.29 Aligned_cols=97 Identities=22% Similarity=0.217 Sum_probs=62.0
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCC--cEEecCCCHHHHHHhcCCccEEEEc
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGA--DSFLVSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~--~~v~~~~~~~~~~~~~~g~d~vid~ 254 (361)
.+.++++||-+|+|. |..+..+++.. .+++.++.+++....+.+ ..+. ...+...+........+.+|+|+..
T Consensus 30 ~~~~~~~vldiG~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 107 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVG 107 (192)
T ss_dssp CCCTTCEEEEESCTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEES
T ss_pred CCCCCCEEEEECCCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEEC
Confidence 468899999999876 77788887766 899999988765544322 2443 2112222222211111479999976
Q ss_pred CCC---cccHHHHHHhhccCCEEEEec
Q 018094 255 VSA---VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 255 ~g~---~~~~~~~~~~l~~~G~~v~~g 278 (361)
... ...+..+.+.|+++|.++...
T Consensus 108 ~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 108 GSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp CCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 442 223566778899999998763
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=95.57 E-value=0.037 Score=47.72 Aligned_cols=76 Identities=22% Similarity=0.407 Sum_probs=48.1
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHH---HcCCc-EE--ecC-C
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAIE---RLGAD-SF--LVS-R 236 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~-------------------~~~~~~~~---~~g~~-~v--~~~-~ 236 (361)
+.+|+|+|+|++|..++..+...|. ++++++... .|...+.+ ++... .+ ++. -
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 4689999999999999999999998 666665432 22222222 22221 11 111 1
Q ss_pred CHHHHHHhcCCccEEEEcCCCcc
Q 018094 237 DQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 237 ~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+.+.+.++..++|+|+|+..+..
T Consensus 108 ~~~~~~~~~~~~DvVi~~~d~~~ 130 (251)
T 1zud_1 108 TGEALKDAVARADVVLDCTDNMA 130 (251)
T ss_dssp CHHHHHHHHHHCSEEEECCSSHH
T ss_pred CHHHHHHHHhcCCEEEECCCCHH
Confidence 23344444457999999998765
|
| >2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.0067 Score=55.38 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=70.3
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCc-------hhHHHHHHHcCCcEEecCCC
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------SKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~-------~~~~~~~~~~g~~~v~~~~~ 237 (361)
+...+-+.+++..+.--+..+|+|.|+|..|..+++++..+|+ +|+++++.. ++..+..+.|.-. .-..+.
T Consensus 170 V~lAall~al~l~g~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~-~~~~~~ 248 (398)
T 2a9f_A 170 VVLAAIFNSLKLLKKSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKV-TNREFK 248 (398)
T ss_dssp HHHHHHHHHHHTTTCCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHH-HSCTTC
T ss_pred HHHHHHHHHHHHhCCCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhc-cCcccc
Confidence 3344445566655443356789999999999999999999999 999998863 1121221111110 000001
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
...+.+...++|++|=+.+.....++.++.|+++-.+..+..+.
T Consensus 249 ~~~L~eav~~ADV~IG~Sapgl~T~EmVk~Ma~~pIIfalsNPt 292 (398)
T 2a9f_A 249 SGTLEDALEGADIFIGVSAPGVLKAEWISKMAARPVIFAMANPI 292 (398)
T ss_dssp CCSCSHHHHTTCSEEECCSTTCCCHHHHHTSCSSCEEEECCSSS
T ss_pred hhhHHHHhccCCEEEecCCCCCCCHHHHHhhCCCCEEEECCCCC
Confidence 11122222357999988775444677888899888888886554
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=95.56 E-value=0.073 Score=49.43 Aligned_cols=81 Identities=14% Similarity=0.025 Sum_probs=52.5
Q ss_pred hCCCCCCCEEEEEcc-chHHHH--HHHHHHHCCCeEEEEeCCch---------------hHHHHHHHcCCcEE---ecCC
Q 018094 178 YGLDKPGMHVGVVGL-GGLGHV--AVKFAKAMGVKVTVISTSPS---------------KKSEAIERLGADSF---LVSR 236 (361)
Q Consensus 178 ~~~~~~g~~VlI~Ga-g~vG~~--a~~la~~~g~~Vi~~~~~~~---------------~~~~~~~~~g~~~v---~~~~ 236 (361)
...+..++++||.|+ +++|++ .+..+...|++|+++.++.+ ...+..++.|.... .|-.
T Consensus 54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt 133 (418)
T 4eue_A 54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF 133 (418)
T ss_dssp SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence 344577899999997 899998 44444456999999987543 22333455665432 3445
Q ss_pred CHHHHHH-------hcCCccEEEEcCCCc
Q 018094 237 DQDEMQA-------AMGTMDGIIDTVSAV 258 (361)
Q Consensus 237 ~~~~~~~-------~~~g~d~vid~~g~~ 258 (361)
+.+.+.+ ..+++|++++++|..
T Consensus 134 d~~~v~~~v~~i~~~~G~IDiLVnNAG~~ 162 (418)
T 4eue_A 134 SNETKDKVIKYIKDEFGKIDLFVYSLAAP 162 (418)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccc
Confidence 5443332 234799999998863
|
| >3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.14 Score=47.57 Aligned_cols=137 Identities=20% Similarity=0.198 Sum_probs=84.5
Q ss_pred CEEEEEccch---HHHHHHHHHHHCC-CeEEE-E-eCCchhHHHHHHHcCCcEEecCCCHHHHHHh----cCCccEEEEc
Q 018094 185 MHVGVVGLGG---LGHVAVKFAKAMG-VKVTV-I-STSPSKKSEAIERLGADSFLVSRDQDEMQAA----MGTMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Gag~---vG~~a~~la~~~g-~~Vi~-~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~----~~g~d~vid~ 254 (361)
=+|.|+|+|. +|...+..++..+ ++++. + +++.++.+++++++|....-.+.+.+.+.+. ...+|+|+.+
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~I~ 117 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVAIV 117 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEEEC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEEEC
Confidence 3688999987 9988888777765 57764 4 5556677778888886411123444433332 1469999999
Q ss_pred CCCcccHHHHHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcE-EEecccCCHHHHHHHHHHHHcCCCceee
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKI-VGGSMIGGMKETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~-i~g~~~~~~~~~~~~~~~l~~~~l~~~~ 325 (361)
+....-...+..+++. |+-|++-. ++..+... .-.+++. ..++.......++.+.+++.+|.|-...
T Consensus 118 tp~~~H~~~~~~al~a-GkhVl~EK---Pla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~iG~i~ 192 (417)
T 3v5n_A 118 TPNHVHYAAAKEFLKR-GIHVICDK---PLTSTLADAKKLKKAADESDALFVLTHNYTGYPMVRQAREMIENGDIGAVR 192 (417)
T ss_dssp SCTTSHHHHHHHHHTT-TCEEEEES---SSCSSHHHHHHHHHHHHHCSSCEEEECGGGGSHHHHHHHHHHHTTTTCSEE
T ss_pred CCcHHHHHHHHHHHhC-CCeEEEEC---CCcCCHHHHHHHHHHHHHcCCEEEEEecccCCHHHHHHHHHHhcCCCCCeE
Confidence 9887546667777765 55566643 33222221 1223443 3444443445678888999999886543
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=95.54 E-value=0.081 Score=46.12 Aligned_cols=89 Identities=11% Similarity=0.111 Sum_probs=61.6
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc----
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH---- 259 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~---- 259 (361)
.+|||+|+|.+|...+..+...|.+|++++++.++...+ +..+.+.+ .|..+.+ ..++|+||.+++...
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~~ 79 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAI-RASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGDP 79 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHH-HHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBCH
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhH-hhCCCeEEEecccccc-----cCCCCEEEECCCccccccH
Confidence 579999999999999999988899999999998776554 34454433 2323311 468999999997642
Q ss_pred cHHHHHHhhcc----CCEEEEecC
Q 018094 260 PLMPLIGLLKS----QGKLVLVGA 279 (361)
Q Consensus 260 ~~~~~~~~l~~----~G~~v~~g~ 279 (361)
.....++.++. -.+++.++.
T Consensus 80 ~~~~l~~a~~~~~~~~~~~v~~Ss 103 (286)
T 3ius_A 80 VLAALGDQIAARAAQFRWVGYLST 103 (286)
T ss_dssp HHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred HHHHHHHHHHhhcCCceEEEEeec
Confidence 12344444433 268887753
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.53 E-value=0.03 Score=49.97 Aligned_cols=84 Identities=19% Similarity=0.236 Sum_probs=54.3
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++.. +...+. .++....|+|+-++....
T Consensus 142 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-----------~~~~~l---~ell~~aDvV~l~~p~~~~t 207 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP-----------YPFLSL---EELLKEADVVSLHTPLTPET 207 (311)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS-----------SCBCCH---HHHHHHCSEEEECCCCCTTT
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc-----------cccCCH---HHHHhhCCEEEEeCCCChHH
Confidence 3678999999999999999999999999999988765421 111111 122234666666654421
Q ss_pred --cH-HHHHHhhccCCEEEEecC
Q 018094 260 --PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..++++..+++++.
T Consensus 208 ~~li~~~~l~~mk~ga~lin~sr 230 (311)
T 2cuk_A 208 HRLLNRERLFAMKRGAILLNTAR 230 (311)
T ss_dssp TTCBCHHHHTTSCTTCEEEECSC
T ss_pred HhhcCHHHHhhCCCCcEEEECCC
Confidence 11 234556666666666654
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=95.52 E-value=0.026 Score=50.16 Aligned_cols=66 Identities=14% Similarity=0.047 Sum_probs=38.3
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcC--CccEEEEcCCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSA 257 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~--g~d~vid~~g~ 257 (361)
+.+|||+|+ |.+|...++.+...|.+|++++++.++. + ....|..+.+.+.++.. ++|+||.+++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-------K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-------C-eEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 468999998 9999999999998999999998764330 1 01122223333333322 58999999875
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=95.50 E-value=0.033 Score=50.29 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=61.7
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~---- 258 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++..++. . +-+... .+ +.++....|+|+-++...
T Consensus 147 ~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--~--~~~~~~----~~---l~ell~~aDvV~l~~Plt~~t~ 215 (343)
T 2yq5_A 147 YNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--F--EPFLTY----TD---FDTVLKEADIVSLHTPLFPSTE 215 (343)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--G--TTTCEE----CC---HHHHHHHCSEEEECCCCCTTTT
T ss_pred CCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--h--hccccc----cC---HHHHHhcCCEEEEcCCCCHHHH
Confidence 47899999999999999999999999999999876541 1 112211 12 223334589999887742
Q ss_pred c-cHHHHHHhhccCCEEEEecC
Q 018094 259 H-PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 ~-~~~~~~~~l~~~G~~v~~g~ 279 (361)
. .-...+..|+++..+++++.
T Consensus 216 ~li~~~~l~~mk~gailIN~aR 237 (343)
T 2yq5_A 216 NMIGEKQLKEMKKSAYLINCAR 237 (343)
T ss_dssp TCBCHHHHHHSCTTCEEEECSC
T ss_pred HHhhHHHHhhCCCCcEEEECCC
Confidence 1 12456778899999999874
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.50 E-value=0.076 Score=47.95 Aligned_cols=86 Identities=27% Similarity=0.259 Sum_probs=60.1
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+.+|.|+|.|.+|.+.++.++..|.+|++..++.++..+.+++.|.... +.+ +.....|+||-++.... ...
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~----~~~---e~~~~aDvVilavp~~~-~~~ 87 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA----DVK---TAVAAADVVMILTPDEF-QGR 87 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE----CHH---HHHHTCSEEEECSCHHH-HHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc----cHH---HHHhcCCEEEEeCCcHH-HHH
Confidence 3469999999999999999999999999988887664455577786422 221 22236899999988765 344
Q ss_pred HHH-----hhccCCEEEEe
Q 018094 264 LIG-----LLKSQGKLVLV 277 (361)
Q Consensus 264 ~~~-----~l~~~G~~v~~ 277 (361)
.++ .++++..++.+
T Consensus 88 v~~~~i~~~l~~~~ivi~~ 106 (338)
T 1np3_A 88 LYKEEIEPNLKKGATLAFA 106 (338)
T ss_dssp HHHHHTGGGCCTTCEEEES
T ss_pred HHHHHHHhhCCCCCEEEEc
Confidence 443 34555556654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.021 Score=52.40 Aligned_cols=73 Identities=10% Similarity=0.115 Sum_probs=53.7
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
..+|||+|+ |.+|...++.+...|.+|++++++..+.... ...+...+ .|..+.+.+.++..++|+||.+++.
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-ccCCceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 468999998 9999999999988999999999876543211 11233322 3455666677767799999999885
|
| >3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.12 Score=47.76 Aligned_cols=137 Identities=18% Similarity=0.112 Sum_probs=85.6
Q ss_pred CEEEEEccch---HHHHHHHHHHHCC-CeEEE-E-eCCchhHHHHHHHcCCcEEecCCCHHHHHHhc----CCccEEEEc
Q 018094 185 MHVGVVGLGG---LGHVAVKFAKAMG-VKVTV-I-STSPSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Gag~---vG~~a~~la~~~g-~~Vi~-~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~g~d~vid~ 254 (361)
=+|.|+|+|. +|...+..++..+ ++++. + +++.++..++++++|....-.+.+.+.+.+.. ..+|+|+.+
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~i~ 92 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVSIA 92 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEEEE
T ss_pred ceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEEEC
Confidence 3688999988 9988887777665 67775 4 55666777778888874111234444433321 469999999
Q ss_pred CCCcccHHHHHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcEE-EecccCCHHHHHHHHHHHHcCCCceee
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~~ 325 (361)
+....-...+..+++. |+-|++ ..++..+... .-.+++.+ .++.......++.+-+++.+|.+-...
T Consensus 93 tp~~~H~~~~~~al~a-GkhVl~---EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~G~iG~i~ 167 (398)
T 3dty_A 93 TPNGTHYSITKAALEA-GLHVVC---EKPLCFTVEQAENLRELSHKHNRIVGVTYGYAGHQLIEQAREMIAAGELGDVR 167 (398)
T ss_dssp SCGGGHHHHHHHHHHT-TCEEEE---CSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGGSHHHHHHHHHHHTTTTCSEE
T ss_pred CCcHHHHHHHHHHHHC-CCeEEE---eCCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCeE
Confidence 8887546667777775 556666 3333333322 12244444 444433345678888899999886543
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.45 E-value=0.076 Score=45.02 Aligned_cols=94 Identities=11% Similarity=0.097 Sum_probs=61.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~~ 259 (361)
...++++|+|+|.+|...++.++..|. |+++++++++..++ + .|...+. |..+.+.+.+. ..++|.++-+++...
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~-~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~ 83 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL-R-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS 83 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH-H-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH-h-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence 456789999999999999999988888 88888777665554 3 5654332 33445555554 458999999988764
Q ss_pred cH---HHHHHhhccCCEEEEec
Q 018094 260 PL---MPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 260 ~~---~~~~~~l~~~G~~v~~g 278 (361)
.- ....+.+.+..+++.-.
T Consensus 84 ~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 84 ETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHHHHCCCCeEEEEE
Confidence 11 12333445555666553
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.44 E-value=0.073 Score=46.50 Aligned_cols=88 Identities=19% Similarity=0.162 Sum_probs=60.4
Q ss_pred EEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcC-CccEEEEcCCCcccHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG-TMDGIIDTVSAVHPLM 262 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~-g~d~vid~~g~~~~~~ 262 (361)
+|.|+|+|.+|.+.++.++..|. +|++.+++.++...+ +++|...... .+. .+... ++|+||.++.... ..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~-~~~g~~~~~~-~~~---~~~~~~~aDvVilavp~~~-~~ 76 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGT-TSI---AKVEDFSPDFVMLSSPVRT-FR 76 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEE-SCG---GGGGGTCCSEEEECSCHHH-HH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-HHCCCccccc-CCH---HHHhcCCCCEEEEcCCHHH-HH
Confidence 68899999999999999999887 899988887776554 5677632111 111 12334 7899999988754 32
Q ss_pred H----HHHhhccCCEEEEecC
Q 018094 263 P----LIGLLKSQGKLVLVGA 279 (361)
Q Consensus 263 ~----~~~~l~~~G~~v~~g~ 279 (361)
. ....++++..++.++.
T Consensus 77 ~v~~~l~~~l~~~~iv~~~~~ 97 (281)
T 2g5c_A 77 EIAKKLSYILSEDATVTDQGS 97 (281)
T ss_dssp HHHHHHHHHSCTTCEEEECCS
T ss_pred HHHHHHHhhCCCCcEEEECCC
Confidence 2 2334667777776654
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=95.42 E-value=0.028 Score=50.05 Aligned_cols=99 Identities=16% Similarity=0.123 Sum_probs=63.5
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCc--EEecCCCHHHHHHhcCCccEEEEc
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~ 254 (361)
.++++++||-+|+|. |..+..+++..+++|+.++.+++....+. ++.|.. .-+...+...+....+.+|+|+..
T Consensus 114 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 192 (312)
T 3vc1_A 114 QAGPDDTLVDAGCGR-GGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNN 192 (312)
T ss_dssp CCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEE
T ss_pred cCCCCCEEEEecCCC-CHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEEC
Confidence 368899999999864 77777888877899999998877554332 234432 112112211111112479999874
Q ss_pred CC-----CcccHHHHHHhhccCCEEEEecC
Q 018094 255 VS-----AVHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 255 ~g-----~~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
.. -...+..+.+.|+|+|+++.+..
T Consensus 193 ~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 193 ESTMYVDLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp SCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 32 13346778889999999997753
|
| >1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.021 Score=51.50 Aligned_cols=86 Identities=23% Similarity=0.247 Sum_probs=61.0
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~---- 258 (361)
.|.+|.|+|.|.+|...++.++.+|++|++.++..++. + ++. .. ..+. .++....|+|+.++...
T Consensus 145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~----~~~l---~ell~~aDvV~~~~p~t~~t~ 213 (331)
T 1xdw_A 145 RNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDY-CT----QVSL---DEVLEKSDIITIHAPYIKENG 213 (331)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTT-CE----ECCH---HHHHHHCSEEEECCCCCTTTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhc-cc----cCCH---HHHHhhCCEEEEecCCchHHH
Confidence 57899999999999999999999999999998876542 1 121 11 1122 22333589999876643
Q ss_pred ccH-HHHHHhhccCCEEEEecC
Q 018094 259 HPL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 ~~~-~~~~~~l~~~G~~v~~g~ 279 (361)
+.+ ...+..|+++..+++++.
T Consensus 214 ~li~~~~l~~mk~ga~lin~sr 235 (331)
T 1xdw_A 214 AVVTRDFLKKMKDGAILVNCAR 235 (331)
T ss_dssp CSBCHHHHHTSCTTEEEEECSC
T ss_pred HHhCHHHHhhCCCCcEEEECCC
Confidence 112 457788899999988874
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=95.41 E-value=0.18 Score=45.14 Aligned_cols=132 Identities=14% Similarity=0.004 Sum_probs=81.9
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEe-CCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVIS-TSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+|.|+|+|.+|...+..++.. +.+++.++ ++.++..++++++|...+ +.+.+.+.+ ...+|+|+.++........
T Consensus 7 ~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~--~~~~~~ll~-~~~~D~V~i~tp~~~h~~~ 83 (330)
T 3e9m_A 7 RYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVA--YGSYEELCK-DETIDIIYIPTYNQGHYSA 83 (330)
T ss_dssp EEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCC--BSSHHHHHH-CTTCSEEEECCCGGGHHHH
T ss_pred EEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCce--eCCHHHHhc-CCCCCEEEEcCCCHHHHHH
Confidence 688899999998888887775 66887554 455566677778886322 233332221 2379999999988765666
Q ss_pred HHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcEE-EecccCCHHHHHHHHHHHHcCCCcee
Q 018094 264 LIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
+..+++.+ +-+++.. ++..+... .-.+++.+ .++.......+..+.+++.+|.+-..
T Consensus 84 ~~~al~~g-k~vl~EK---P~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~iG~i 148 (330)
T 3e9m_A 84 AKLALSQG-KPVLLEK---PFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGLGEI 148 (330)
T ss_dssp HHHHHHTT-CCEEECS---SCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTTCSE
T ss_pred HHHHHHCC-CeEEEeC---CCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCCCCe
Confidence 77777665 4455533 22222211 12244444 34443334567888888889887543
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=95.40 E-value=0.057 Score=48.55 Aligned_cols=74 Identities=18% Similarity=0.191 Sum_probs=50.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHC--CCeEEEEeCCchh-HHHHHHHc---CCcE-EecCCCHHHHHHhcCCccEEEEcCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTSPSK-KSEAIERL---GADS-FLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~--g~~Vi~~~~~~~~-~~~~~~~~---g~~~-v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
.+|||+|+ |.+|...++.+... |.+|+++++.... ..+..+++ +... ..|..+.+.+.++..++|+||.+++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 84 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 84 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECCc
Confidence 47999997 99999999888776 7899999886421 11111222 1221 1245566677777778999999998
Q ss_pred Cc
Q 018094 257 AV 258 (361)
Q Consensus 257 ~~ 258 (361)
..
T Consensus 85 ~~ 86 (348)
T 1oc2_A 85 ES 86 (348)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=95.39 E-value=0.023 Score=54.63 Aligned_cols=71 Identities=25% Similarity=0.286 Sum_probs=50.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHH-hcCCccEEEEcCCC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQA-AMGTMDGIIDTVSA 257 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-~~~g~d~vid~~g~ 257 (361)
.++++||+|+|++|.+++..+...|++|+++.++.++..+++++++... +...+ +.+ ....+|++++++|.
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~-~~~~d---l~~~~~~~~DilVN~agv 434 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKA-LSLTD---LDNYHPEDGMVLANTTSM 434 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-C-EETTT---TTTC--CCSEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCce-eeHHH---hhhccccCceEEEECCCC
Confidence 4678999999999999999999999999999999888888878886532 22222 111 11348999999985
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=95.39 E-value=0.028 Score=47.80 Aligned_cols=96 Identities=16% Similarity=0.123 Sum_probs=63.1
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHH---HHcCCc--EEecCCC-HHHHHHhc-----CCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAI---ERLGAD--SFLVSRD-QDEMQAAM-----GTM 248 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~---~~~g~~--~v~~~~~-~~~~~~~~-----~g~ 248 (361)
.++++||-+|+| .|..++.+++.+ +.+++.++.+++....+. ++.|.. ..+...+ .+.+..+. +.+
T Consensus 71 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 71 TGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp HTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred cCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 467889999987 788888999886 469999998876543332 233542 1122223 23334432 579
Q ss_pred cEEEEcCCCc---ccHHHHHHhhccCCEEEEec
Q 018094 249 DGIIDTVSAV---HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 249 d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 278 (361)
|+||-..... ..+..+.+.|+++|.++.-.
T Consensus 150 D~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 150 DLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 9999544322 23677889999999998754
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=95.39 E-value=0.13 Score=48.66 Aligned_cols=93 Identities=20% Similarity=0.262 Sum_probs=61.6
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 265 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~ 265 (361)
+|.|+|+|.+|...+..+...|.+|++.+++.++..++.++.+...+....+.+...+..+..|+||-++.....+...+
T Consensus 7 ~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~vl 86 (474)
T 2iz1_A 7 NFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDATI 86 (474)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHHHH
T ss_pred cEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHHHH
Confidence 58899999999999988888899999999988887777655421112223333322222235899999998753244444
Q ss_pred H----hhccCCEEEEec
Q 018094 266 G----LLKSQGKLVLVG 278 (361)
Q Consensus 266 ~----~l~~~G~~v~~g 278 (361)
+ .++++..++.++
T Consensus 87 ~~l~~~l~~g~iiId~s 103 (474)
T 2iz1_A 87 KSLLPLLDIGDILIDGG 103 (474)
T ss_dssp HHHGGGCCTTCEEEECS
T ss_pred HHHHhhCCCCCEEEECC
Confidence 3 455666666664
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=95.36 E-value=0.044 Score=49.18 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HHcC-----CcEE-ecCCCHHHHHHhcCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI--ERLG-----ADSF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~--~~~g-----~~~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
.+++|||+|+ |.+|...+..+...|.+|++++++.+....+. .++. ...+ .|..+.+.+.++..++|+||.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 4678999997 99999999999889999999888765322221 1221 1111 244444555565678999999
Q ss_pred cCCC
Q 018094 254 TVSA 257 (361)
Q Consensus 254 ~~g~ 257 (361)
+++.
T Consensus 84 ~A~~ 87 (337)
T 2c29_D 84 VATP 87 (337)
T ss_dssp CCCC
T ss_pred eccc
Confidence 8763
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.017 Score=49.08 Aligned_cols=68 Identities=21% Similarity=0.216 Sum_probs=47.9
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhc------CCccEEEEcCC
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDTVS 256 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~------~g~d~vid~~g 256 (361)
++++||.|+ |.+|...++.+...|++|++++++.+ . +++ .....|-.+.+.+.++. +++|++|.++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----EDL-IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----SSS-EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----cce-EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 578999998 99999999988888999999988764 1 111 01123445554444332 37999999987
Q ss_pred C
Q 018094 257 A 257 (361)
Q Consensus 257 ~ 257 (361)
.
T Consensus 76 ~ 76 (242)
T 1uay_A 76 V 76 (242)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.036 Score=48.08 Aligned_cols=87 Identities=16% Similarity=0.156 Sum_probs=60.2
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
-+|.|+|+|.+|...++.+...|.+ |.+.+++.++..++.+++|.... .+. .+....+|+||.++.... ...
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~---~~~---~~~~~~~Dvvi~av~~~~-~~~ 83 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT---TDL---AEVNPYAKLYIVSLKDSA-FAE 83 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE---SCG---GGSCSCCSEEEECCCHHH-HHH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee---CCH---HHHhcCCCEEEEecCHHH-HHH
Confidence 3699999999999988888877887 88888888777777666675422 111 122347899999998764 444
Q ss_pred HHHh----hccCCEEEEec
Q 018094 264 LIGL----LKSQGKLVLVG 278 (361)
Q Consensus 264 ~~~~----l~~~G~~v~~g 278 (361)
.++. ++++..++.+.
T Consensus 84 v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 84 LLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp HHHHHHTTCCTTCEEEECC
T ss_pred HHHHHHhhcCCCcEEEECC
Confidence 4443 33555666664
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.059 Score=48.60 Aligned_cols=85 Identities=24% Similarity=0.280 Sum_probs=59.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...++.++.+|.+|++.++..++ ..+... ..+ +.++....|+|+-++....
T Consensus 170 ~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~------~~~~~~---~~s---l~ell~~aDvVil~vP~t~~t~ 237 (340)
T 4dgs_A 170 KGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS------GVDWIA---HQS---PVDLARDSDVLAVCVAASAATQ 237 (340)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT------TSCCEE---CSS---HHHHHHTCSEEEECC-------
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc------ccCcee---cCC---HHHHHhcCCEEEEeCCCCHHHH
Confidence 5789999999999999999999999999999887653 122211 112 2334446899998876321
Q ss_pred -cH-HHHHHhhccCCEEEEecC
Q 018094 260 -PL-MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 -~~-~~~~~~l~~~G~~v~~g~ 279 (361)
.+ ...+..++++..+++++.
T Consensus 238 ~li~~~~l~~mk~gailIN~aR 259 (340)
T 4dgs_A 238 NIVDASLLQALGPEGIVVNVAR 259 (340)
T ss_dssp ---CHHHHHHTTTTCEEEECSC
T ss_pred HHhhHHHHhcCCCCCEEEECCC
Confidence 12 356677899999988874
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.32 E-value=0.12 Score=49.04 Aligned_cols=93 Identities=24% Similarity=0.241 Sum_probs=62.3
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC----cEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
+|.|+|+|.+|...+..+...|.+|++.+++.++..++.++.|. ..+....+.+.+.+...++|+||-++.....+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~v 82 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHHH
Confidence 48889999999999998888899999999988887777665551 11222333333222223689999999885324
Q ss_pred HHHH----HhhccCCEEEEec
Q 018094 262 MPLI----GLLKSQGKLVLVG 278 (361)
Q Consensus 262 ~~~~----~~l~~~G~~v~~g 278 (361)
...+ ..++++..++.++
T Consensus 83 ~~vl~~l~~~l~~g~iIId~s 103 (478)
T 1pgj_A 83 DSTIEQLKKVFEKGDILVDTG 103 (478)
T ss_dssp HHHHHHHHHHCCTTCEEEECC
T ss_pred HHHHHHHHhhCCCCCEEEECC
Confidence 4433 3455666666654
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=95.32 E-value=0.11 Score=46.56 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=29.4
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~ 216 (361)
.+.+|+|+|+|++|..++..+...|. ++++++..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 46889999999999999999999998 77777653
|
| >3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A | Back alignment and structure |
|---|
Probab=95.30 E-value=0.089 Score=47.66 Aligned_cols=134 Identities=13% Similarity=0.012 Sum_probs=78.8
Q ss_pred EEEEEccchHHH-HHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 186 HVGVVGLGGLGH-VAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 186 ~VlI~Gag~vG~-~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+|.|+|.|.+|. ..+..++.. +++++.+++.+ +..+++++++...+-.+.+.+.+.+ ...+|+|+.++....-...
T Consensus 4 rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~-~~~~~a~~~~~~~~~~~~~~~~ll~-~~~~D~V~i~tp~~~h~~~ 81 (349)
T 3i23_A 4 KMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH-VNEKAAAPFKEKGVNFTADLNELLT-DPEIELITICTPAHTHYDL 81 (349)
T ss_dssp EEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT-CCHHHHHHHHTTTCEEESCTHHHHS-CTTCCEEEECSCGGGHHHH
T ss_pred EEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC-HHHHHHHhhCCCCCeEECCHHHHhc-CCCCCEEEEeCCcHHHHHH
Confidence 588999999998 677766554 67888887766 4455656653211111223232211 2369999999988655666
Q ss_pred HHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcEEE-ecccCCHHHHHHHHHHHHcCCCceee
Q 018094 264 LIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKIVG-GSMIGGMKETQEMIDFAAKHNIRADI 325 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~i~-g~~~~~~~~~~~~~~~l~~~~l~~~~ 325 (361)
+..+++.| +-|++- .++..+... .-.+++.+. ++.......+..+.+++.+|.+-...
T Consensus 82 ~~~al~aG-k~Vl~E---KP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG~i~ 147 (349)
T 3i23_A 82 AKQAILAG-KSVIVE---KPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVEQGFLGEIN 147 (349)
T ss_dssp HHHHHHTT-CEEEEC---SCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHHTTTCSEE
T ss_pred HHHHHHcC-CEEEEE---CCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHhcCCCCCEE
Confidence 77777755 555663 333333221 122444443 33332334577788888888776443
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.033 Score=50.02 Aligned_cols=74 Identities=15% Similarity=0.200 Sum_probs=51.4
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHH-HHHHHcCC--c-EE--ecCCCHHHHHHhcC--CccEEEEc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS-EAIERLGA--D-SF--LVSRDQDEMQAAMG--TMDGIIDT 254 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~-~~~~~~g~--~-~v--~~~~~~~~~~~~~~--g~d~vid~ 254 (361)
+.+|||+|+ |.+|...++.+...|.+|++++++.++.. ...+.++. . .+ .|..+.+.+.++.. ++|+||.+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 568999998 99999999999889999999998765421 12234421 1 11 24445555555444 57999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
++.
T Consensus 83 A~~ 85 (345)
T 2z1m_A 83 AAQ 85 (345)
T ss_dssp CCC
T ss_pred CCC
Confidence 985
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.092 Score=45.29 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=57.0
Q ss_pred EEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
+|.|+|+|.+|...+..+...| .+|++.+++.++..++.+++|....-+.. +.. .+|+||-++. .......
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~------~~~-~~D~vi~~v~-~~~~~~v 73 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLP------ELH-SDDVLILAVK-PQDMEAA 73 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCC------CCC-TTSEEEECSC-HHHHHHH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHH------HHh-cCCEEEEEeC-chhHHHH
Confidence 5889999999999888887778 89999999888877776666764321111 123 5788888887 3335555
Q ss_pred HHhhcc-CCEEEEe
Q 018094 265 IGLLKS-QGKLVLV 277 (361)
Q Consensus 265 ~~~l~~-~G~~v~~ 277 (361)
+..+.+ +..++.+
T Consensus 74 ~~~l~~~~~ivv~~ 87 (263)
T 1yqg_A 74 CKNIRTNGALVLSV 87 (263)
T ss_dssp HTTCCCTTCEEEEC
T ss_pred HHHhccCCCEEEEe
Confidence 555542 3344444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 361 | ||||
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 3e-32 | |
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 2e-28 | |
| d1piwa2 | 168 | c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase | 5e-28 | |
| d1uufa1 | 179 | b.35.1.2 (A:3-144,A:313-349) Hypothetical protein | 5e-22 | |
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 2e-20 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 2e-20 | |
| d1llua2 | 166 | c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom | 2e-18 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 5e-18 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 9e-18 | |
| d1rjwa2 | 168 | c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu | 2e-17 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 3e-17 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 8e-17 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 4e-16 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 4e-16 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 4e-16 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 5e-16 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 9e-16 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 2e-14 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 2e-14 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 2e-14 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 5e-14 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 1e-13 | |
| d1vj0a1 | 184 | b.35.1.2 (A:2-155,A:338-367) Hypothetical protein | 2e-13 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 2e-13 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 3e-13 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 2e-12 | |
| d1jvba2 | 170 | c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo | 6e-12 | |
| d2jhfa1 | 198 | b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase | 9e-12 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 1e-11 | |
| d1jqba1 | 177 | b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon | 3e-11 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 4e-11 | |
| d1jvba1 | 177 | b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase | 2e-10 | |
| d1iz0a2 | 171 | c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus | 7e-08 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 5e-07 | |
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 3e-06 | |
| d1tt7a1 | 162 | b.35.1.2 (A:2-127,A:295-330) Hypothetical protein | 9e-06 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 2e-05 | |
| d1yb5a2 | 174 | c.2.1.1 (A:121-294) Quinone oxidoreductase {Human | 2e-05 | |
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 5e-05 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 1e-04 | |
| d1gu7a2 | 189 | c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea | 7e-04 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 0.004 |
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 117 bits (294), Expect = 3e-32
Identities = 63/185 (34%), Positives = 95/185 (51%), Gaps = 6/185 (3%)
Query: 9 HPKNAFGWAARDTSGVLSP--FHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIY 66
+P+ G A + +P + + + D+ K+ CG+C SD+H WGN
Sbjct: 3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKM 62
Query: 67 PIVPGHEIVGVVTEVGSKVSK-FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA 125
P+V GHEIVG V ++G K + KVG +VGVG V SC CD C D E YC K + TY+
Sbjct: 63 PLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS 122
Query: 126 NKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI-TVYSPLRFYGLDKPG 184
Y DG ++ GGY++ + EHFVV IPE ++ P+ AG+ + + + +
Sbjct: 123 QPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVET-LPVGEAGVHEAFERMEKGDV-RYR 180
Query: 185 MHVGV 189
+
Sbjct: 181 FTLVG 185
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 106 bits (266), Expect = 2e-28
Identities = 86/167 (51%), Positives = 108/167 (64%), Gaps = 3/167 (1%)
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
L A APLLCAGIT YSPLR + PG VGVVG+GGLGH+ +K A AMG V T
Sbjct: 4 EQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF-T 61
Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
+ K EA + LGAD + SR+ DEM A + + D I++TV+A H L LLK G +
Sbjct: 62 TSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMT 121
Query: 276 LVGAPEKPLELP-AFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNI 321
LVGAP P + P F+L+M R+ + GSMIGG+ ETQEM+DF A+H I
Sbjct: 122 LVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 168
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (263), Expect = 5e-28
Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
P APLLC G+TVYSPL G PG VG+VGLGG+G + +KAM T + +
Sbjct: 2 PSHLAAPLLCGGLTVYSPLVRNGC-GPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISR 59
Query: 217 PSKKSEAIERLGADSFLVSRDQDEM-QAAMGTMDGIIDTVSAVHPLMP--LIGLLKSQGK 273
S+K E ++GAD ++ + ++ + + T D I+ S++ + + +K G+
Sbjct: 60 SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGR 119
Query: 274 LVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
+V + PE+ L + + S +G +KE +++ ++ +I+
Sbjct: 120 IVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK 168
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 90.0 bits (222), Expect = 5e-22
Identities = 64/158 (40%), Positives = 86/158 (54%), Gaps = 2/158 (1%)
Query: 17 AARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVG 76
A L P +RR G DV ++ +CG+CHSDLH +++EW +YP VPGHEIVG
Sbjct: 5 GAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVG 64
Query: 77 VVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGT-ITY 135
V VG +V K+ GD VGVGC+V SC+ C+ C LENYC + TY + D T
Sbjct: 65 RVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL 124
Query: 136 GGYSDIMVADEHFVVRIPE-GTPLDATAPLLCAGITVY 172
GGYS +V E +V+RI + + A +
Sbjct: 125 GGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERML 162
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 86.1 bits (212), Expect = 2e-20
Identities = 35/166 (21%), Positives = 59/166 (35%), Gaps = 15/166 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
++ K+ G+CH+DL+ + +P+V GHE G+V VG V++F+ G+KV
Sbjct: 32 HANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHD--------------GTITYGGYSDI 141
+ + C C C N C K + + +S
Sbjct: 91 IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150
Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHV 187
V ++ V +I LD +V + K V
Sbjct: 151 TVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTV 196
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 86.1 bits (212), Expect = 2e-20
Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 18/169 (10%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V K+ +CH+D + + +P++ GH G+V VG V+K K GD V
Sbjct: 30 KAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV- 88
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY--------------GGYSDI 141
+ + C C C N C K+ +T + +S+
Sbjct: 89 IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEY 148
Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
V + V +I +D + + L G + V
Sbjct: 149 TVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFE---LMHSGKSIRTV 194
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 79.7 bits (195), Expect = 2e-18
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
AP+LCAG+TVY L+ +PG V + G+GGLGHVAV++A+AMG+ V I
Sbjct: 2 EFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDID 60
Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDG---IIDTVSAVHPLMPLIGLLKSQGK 273
+K E +LGA + +R +D ++A + G ++ T + IG+ + G
Sbjct: 61 DAKL-ELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGT 119
Query: 274 LVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
+ LVG P P F +++ + GS++G + QE +DFA +
Sbjct: 120 IALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGE 164
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 78.4 bits (192), Expect = 5e-18
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWG-NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKV 94
G V K+ G+CH+DLH + +W P +PGHE VG V VGS V++ K GD+V
Sbjct: 29 GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 88
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
G+ + +C C+ C E C T + Y++ ++AD ++V +P+
Sbjct: 89 GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGG-------YAEYVLADPNYVGILPK 141
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190
L + +R G V +
Sbjct: 142 NVKATIHPGKLDDINQILDQMR--AGQIEGRIVLEM 175
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 78.4 bits (192), Expect = 9e-18
Identities = 38/174 (21%), Positives = 64/174 (36%), Gaps = 23/174 (13%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V +V +C +D++ + A++P+V GHE G+V VG V+ FK GDKV
Sbjct: 32 KACEVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV- 89
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKV------------------IMTYANKYHDGTITYGG 137
+ C+ C C L N C K+ T + +
Sbjct: 90 IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS 149
Query: 138 YSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
+S V E + R+ + LD ++ + L K G + +
Sbjct: 150 FSQYTVVSEANLARVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL 200
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 76.7 bits (187), Expect = 2e-17
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
+ AP+ CAG+T Y L+ G KPG V + G+GGLGHVAV++AKAMG+ V +
Sbjct: 2 SFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 60
Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI--IDTVSAVHPLMPLIGLLKSQGKL 274
K A E ++ + T + ++ G
Sbjct: 61 DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 120
Query: 275 VLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHNIR 322
VLVG P + + +P F ++ + GS++G K+ QE + FAA+ ++
Sbjct: 121 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK 168
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 76.5 bits (187), Expect = 3e-17
Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 11/173 (6%)
Query: 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217
LD A +C+G T Y Y G V + G G LG V A+++G + ++
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62
Query: 218 SKKSEAIERLGADSFLVSRDQDEMQAAMGTM--------DGIIDTVSAVHPLMPLIGLLK 269
+ + E +GAD L R+ + M D I++ L+ LL+
Sbjct: 63 PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122
Query: 270 SQGKLVLVG--APEKPLELPAFSLLMGRKI-VGGSMIGGMKETQEMIDFAAKH 319
G + G P+ P+ + L+ + G + + + +++
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRN 175
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 76.1 bits (186), Expect = 8e-17
Identities = 43/181 (23%), Positives = 62/181 (34%), Gaps = 12/181 (6%)
Query: 32 RRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVG 91
R E V KV IC SD H+++ A +V GHEI G V E G V ++G
Sbjct: 27 RGKKIEHGVILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGRDVENLQIG 85
Query: 92 DKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYAN---KYHDGTITYGGYSDIMV--ADE 146
D V V V +C C SC C V A Y D GG ++ ++ +
Sbjct: 86 DLVSVPFNV-ACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYAD 144
Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAM 206
++++P+ + LD G G + K
Sbjct: 145 FNLLKLPDRDKAMEKINIAEVVGVQV-----ISLDDAPRGYGEFDAGVPKKFVIDPHKTF 199
Query: 207 G 207
Sbjct: 200 S 200
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 73.1 bits (178), Expect = 4e-16
Identities = 46/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 158 LDATAPLLCAGITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
L APL AGIT Y ++ PG +V +VG+GGLGH+AV+ K M +
Sbjct: 6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV 65
Query: 217 PSKKSEAIERLGADSFLVSRDQDE----MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQG 272
+K + ERLGAD + +R ++ +D V + + LL G
Sbjct: 66 KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMG 125
Query: 273 KLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
+L++VG + P ++ GS++G E E++ A +
Sbjct: 126 RLIIVGYGGELRF-PTIRVISSEVSFEGSLVGNYVELHELVTLALQ 170
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 73.4 bits (179), Expect = 4e-16
Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 9/171 (5%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
P++ PL C T P G G +G A+ AK G + +
Sbjct: 2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61
Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQG 272
+ E ++LGA + S+ QD + A G ++ +++ + L + L G
Sbjct: 62 VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121
Query: 273 KLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGGMK---ETQEMIDFAAK 318
K+ +VGAP+ + LL+G K + G + G E++ +
Sbjct: 122 KIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQ 172
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 73.0 bits (178), Expect = 4e-16
Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 8/170 (4%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
L+ + C + Y PG V GLG +G A+ K G +
Sbjct: 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61
Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM------GTMDGIIDTVSAVHPLMPLI-GLLK 269
+K + LGA L R+ D+ + G +D +D L + +
Sbjct: 62 NGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL 121
Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
G +VGA + +P +++GR I G+ GG K + + + +
Sbjct: 122 GWGSCTVVGAKVDEMTIPTVDVILGRSIN-GTFFGGWKSVDSVPNLVSDY 170
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 73.4 bits (179), Expect = 5e-16
Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 44/193 (22%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V KV G+CH+DL ++++ P V GHE G++ +G V++ +VGD V
Sbjct: 27 QGDEVLVKVVATGMCHTDLI-VRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 85
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTY----------------ANKYHDGTITYGGYS 139
+ C C C YC + +D ++
Sbjct: 86 LSYGY--CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 143
Query: 140 DIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVA 199
++ E+ V++ + P D + A
Sbjct: 144 TYALSRENNTVKVTKDFPFDQLVKFYAF-------------------------DEINQAA 178
Query: 200 VKFAKAMGVKVTV 212
+ K + +K +
Sbjct: 179 IDSRKGITLKPII 191
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 72.2 bits (176), Expect = 9e-16
Identities = 42/173 (24%), Positives = 62/173 (35%), Gaps = 13/173 (7%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
PL++ + C T Y PG V GLGG+G A+ KA G + +
Sbjct: 2 PLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGT 60
Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAM-------GTMDGIIDTVSAVHPLMPLIGLLK 269
K LGA L +D D+ + G + + L
Sbjct: 61 HKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC 120
Query: 270 SQGKLVLVGAP--EKPLELPAFSLLMGRKIVGGSMIGG--MKETQEMIDFAAK 318
G V++G + L L LL GR + GS+ GG +E ++D K
Sbjct: 121 GSGVTVVLGLASPNERLPLDPLLLLTGRSLK-GSVFGGFKGEEVSRLVDDYMK 172
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 68.9 bits (167), Expect = 2e-14
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVP-GHEIVGVVTEVGSKVSKFKVGDKV 94
+V ++ CG+CH+DLH +W + GHE VG+V EVG V+ KVGD+V
Sbjct: 24 SYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83
Query: 95 GVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPE 154
G+ + +C CD C E C ++ + G GGY++ A +VV+IP+
Sbjct: 84 GIPWLYSACGHCDYCLSGQETLCE-------HQKNAGYSVDGGYAEYCRAAADYVVKIPD 136
Query: 155 GTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
T ++ PL L+ G V +
Sbjct: 137 NTIIEV-QPLEKINEVFDRMLKG---QINGRVVLTLE 169
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 68.9 bits (167), Expect = 2e-14
Identities = 37/159 (23%), Positives = 54/159 (33%), Gaps = 11/159 (6%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGN---AIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92
E +V ++ + GIC SD+H ++ P+V GHE G V +VG V K GD
Sbjct: 24 KEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD 83
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V V V CR C C N CP + Y V F ++
Sbjct: 84 RVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARY------YVHAADFCHKL 136
Query: 153 PEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
P+ + K + V+
Sbjct: 137 PDNCNVKQLVTHSFKLEQTVDAFEAARK-KADNTIKVMI 174
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 68.5 bits (166), Expect = 2e-14
Identities = 28/165 (16%), Positives = 58/165 (35%), Gaps = 8/165 (4%)
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
+PL+ + C T Y G V GLGG+G + KA G +
Sbjct: 1 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60
Query: 216 SPSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGLLK 269
K + +GA + +D + + + G +D + + + ++ + +
Sbjct: 61 INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120
Query: 270 SQG--KLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
+++ P+ LL+ + G++ GG K +
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSV 165
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 67.4 bits (163), Expect = 5e-14
Identities = 42/163 (25%), Positives = 59/163 (36%), Gaps = 7/163 (4%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
PLD L C T + +PG V GLG +G AV + G K +
Sbjct: 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61
Query: 217 PSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGL-LK 269
K E + GA F+ D E + G +D ++ V V + + LK
Sbjct: 62 NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK 121
Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312
G VLVG + L+ + GSM GG K +
Sbjct: 122 GWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGV 164
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 66.8 bits (162), Expect = 1e-13
Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 26/176 (14%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V K+ GIC SD ++K + +P++ GHE VGVV +G+ V+ K GDKV
Sbjct: 32 KAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVTCVKPGDKV- 89
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH-DGTITY-------------GGYSDI 141
+ V C SC +C N+C K M D T + +++
Sbjct: 90 IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEY 149
Query: 142 MVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGH 197
V + V +I ++ + + G G
Sbjct: 150 TVVADIAVAKIDPKINVNFLVSTKLTLDQI----------NKAFELLSSGQGVRSI 195
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 65.6 bits (159), Expect = 2e-13
Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 9/143 (6%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+ ++ G+C SD+H+ + E PI+ GHE G V EV +
Sbjct: 28 PRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKP 87
Query: 96 VGCMVGS----CRSCDSCAIDLENYCPK--VIMTYANKYHDGTITYGGYSDIMVAD-EHF 148
+V + C C C + E Y + + G YS +V D E
Sbjct: 88 GDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETD 147
Query: 149 VVRIPEGTPLDATAPLLCAGITV 171
V+++ E + PL A +
Sbjct: 148 VLKVSEK--ITHRLPLKEANKAL 168
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 65.4 bits (158), Expect = 2e-13
Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 8/171 (4%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
PLD L C T Y +PG V GLGG+G + K G +
Sbjct: 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61
Query: 217 PSKKSEAIERLGADSFLVSRDQDE------MQAAMGTMDGIIDTVSAVHPLMPLIGLLKS 270
K + GA + +D + ++ G +D + + V + +
Sbjct: 62 NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 121
Query: 271 QGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
+ +V A L+ + G+ GG K + + +++
Sbjct: 122 GWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEY 172
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 64.9 bits (157), Expect = 3e-13
Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 10/165 (6%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
P + + C T Y G KPG V GLGG+G + K+ G +
Sbjct: 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDL 62
Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGT-------MDGIIDTVSAVHPLMPLIGLLK 269
K E +GA + +D + + + + + L
Sbjct: 63 NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122
Query: 270 SQGKLVLVGAPEKP--LELPAFSLLMGRKIVGGSMIGGMKETQEM 312
+ G V+VG P L L GR G + GG+K ++
Sbjct: 123 NYGTSVVVGVPPSAKMLTYDPMLLFTGRTWK-GCVFGGLKSRDDV 166
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.0 bits (152), Expect = 2e-12
Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 16/162 (9%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI---YPIVPGHEIVGVVTEVGSKVSKFKVGD 92
G +V ++ GIC SD+H + P+V GHE G V +VGS V K GD
Sbjct: 30 GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRI 152
+V + + + C + N P + + + F ++
Sbjct: 90 RVAIEPGA-PRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRF------YKHNAAFCYKL 142
Query: 153 PEGTPLDATAPL-LCAGITVYSPLRFYGLDKPGMHVGVVGLG 193
P+ T L + + + G+ + ++
Sbjct: 143 PDNVKPLVTHRFPLEKALEAFETFKK----GLGLKI-MLKCD 179
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 61.3 bits (147), Expect = 6e-12
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 8/169 (4%)
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG-LGGLGHVAVKFAKAMGVKVTVIS 214
++A APL C+GIT Y +R L P + VVG GGLG +AV+ AKA+ +
Sbjct: 2 NAVEA-APLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGV 59
Query: 215 TSPSKKSEAIERLGADSFLVSRDQDEMQA-----AMGTMDGIIDTVSAVHPLMPLIGLLK 269
+ EA +R GAD + + QD + +D +ID ++ L L
Sbjct: 60 DVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALA 119
Query: 270 SQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAK 318
QGK V+VG L A + + GS++G + ++ A
Sbjct: 120 KQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEA 168
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 61.4 bits (148), Expect = 9e-12
Identities = 38/172 (22%), Positives = 57/172 (33%), Gaps = 23/172 (13%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+V K+ GIC SD H++ + I HE G+V +G V+ + GDKV
Sbjct: 32 KAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAG-HEAAGIVESIGEGVTTVRPGDKV- 89
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITY--------------GGYSDI 141
+ C C C N+C K ++ + +S
Sbjct: 90 IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149
Query: 142 MVADEHFVVRIPEGTPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191
V DE V +I LD T L I L + G + +
Sbjct: 150 TVVDEISVAKIDAAFALDPLITHVLPFEKINEGF-----DLLRSGESIRTIL 196
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 60.1 bits (144), Expect = 1e-11
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 33 RATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYP---IVPGHEIVGVVTEVGSKVSKFK 89
R G DV ++ G+CH+DLHL++ W + P GHE VG + EV V +
Sbjct: 21 RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80
Query: 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFV 149
GD V + V + +C +C + +C + G GG+++ M V
Sbjct: 81 KGDPVILHPAV-TDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSV 132
Query: 150 VRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGV 189
+++P+ ++ L V L + G V +
Sbjct: 133 IKLPKDVRVEVDIHKLDEINDVLERLEKGEV--LGRAVLI 170
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 59.6 bits (143), Expect = 3e-11
Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 14/165 (8%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
G D + C SD+H + ++ GHE VG V EVGS+V FK GD+V
Sbjct: 23 GSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVI 82
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
V C RS + A ++ + + + D +G Y + AD + +P+
Sbjct: 83 VPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKD--GVFGEYFHVNDAD-MNLAILPKD 139
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200
L + G + ++ +
Sbjct: 140 VDLSKLVTHVYHGFD-----------HIEEALLLMKDKPKDLIKA 173
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 59.2 bits (142), Expect = 4e-11
Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 10/166 (6%)
Query: 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216
PL+ + T + + + G V V+G+G +G + + AK G + S
Sbjct: 2 PLENAVMITDMMTTGFHGAELADI-EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60
Query: 217 PSKKSEAIERLGADSFLVSRDQDEMQAAMGT-----MDGIIDTVSAVHPLMPLIGLLKSQ 271
EA + GA L ++ M +D +I L + ++K
Sbjct: 61 RPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 120
Query: 272 GKLVLVGAPEKPLELP----AFSLLMGRKIVGGSMIGGMKETQEMI 313
G + + L + M K + G + G + E +
Sbjct: 121 GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERL 166
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 57.3 bits (137), Expect = 2e-10
Identities = 36/154 (23%), Positives = 57/154 (37%), Gaps = 17/154 (11%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAI--------YPIVPGHEIVGVVTEVGSKVSK 87
V KV G+CHSD+H+ + +GN P+ GHEI G + EVG +V
Sbjct: 24 KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83
Query: 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSD-IMVADE 146
+ GD V +C C I E+ C G G Y++ ++V
Sbjct: 84 YSKGDLV-AVNPWQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135
Query: 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGL 180
++ ++ P+ L L +
Sbjct: 136 KYMYKLRRVKPMITKTMKLEEANEAIDNLENFKA 169
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 49.3 bits (116), Expect = 7e-08
Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 5/165 (3%)
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215
+P +A A + +T Y L+ +PG V V G A + +
Sbjct: 2 SPEEA-AAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAA 59
Query: 216 SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLV 275
S +K LGA+ + E A G +D +++ + +GLL G+LV
Sbjct: 60 SRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRG--KEVEESLGLLAHGGRLV 117
Query: 276 LVGAPE-KPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
+GA E + +P L+ V G + + +++ A
Sbjct: 118 YIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGF 162
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 46.9 bits (110), Expect = 5e-07
Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 11/145 (7%)
Query: 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
+ G V V+G G +G V+V AKA V + ++ E + GAD LV E
Sbjct: 25 QLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEE 83
Query: 242 QAAMGTM---------DGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLL 292
++++ + ID + I + ++ G L+LVG + + +P +
Sbjct: 84 ESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNAC 143
Query: 293 MGRKIVGGSMIGGMKETQEMIDFAA 317
+ + ++ A
Sbjct: 144 AREIDIKSVF-RYCNDYPIALEMVA 167
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 45.0 bits (105), Expect = 3e-06
Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 8/165 (4%)
Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKK 220
A G+TVY LR KP G +G +A ++AKA+G K+ + K
Sbjct: 7 AASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA 66
Query: 221 SEAIERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL 276
A++ GA + R++D ++ G ++ + L+ +G +V
Sbjct: 67 QSALKA-GAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVS 125
Query: 277 VGAP--EKPLELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKH 319
G G V + G T+E + A+
Sbjct: 126 FGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNE 170
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 43.3 bits (101), Expect = 9e-06
Identities = 23/166 (13%), Positives = 40/166 (24%), Gaps = 33/166 (19%)
Query: 36 GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVG 95
+ V KV + GI + D K
Sbjct: 29 PKDGVLIKVAYSGINYKDGLAGKAGGNIVREY---------------------------- 60
Query: 96 VGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEG 155
++ + + + + A Y G GG S+ ++V +P+
Sbjct: 61 --PLILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQN 118
Query: 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVK 201
L I + PG ++ G V VK
Sbjct: 119 LSLKEAMVDQLLTIVDREVSL---EETPGALKDILQNRIQGRVIVK 161
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 2e-05
Identities = 32/147 (21%), Positives = 52/147 (35%), Gaps = 8/147 (5%)
Query: 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEM 241
G V V G G +G V + AKAMG V++ + + + +GAD L +
Sbjct: 25 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQ 84
Query: 242 QAAM-------GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMG 294
+ A + I+ A + I +S G LVLVG + +P +
Sbjct: 85 EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIR 144
Query: 295 RKIVGGSMIGGMKETQEMIDFAAKHNI 321
+ G I A ++
Sbjct: 145 EVDIKGVF-RYCNTWPVAISMLASKSV 170
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.3 bits (98), Expect = 2e-05
Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 7/159 (4%)
Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 221
A + T Y L K G V V G G +A + + +
Sbjct: 7 AAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ 66
Query: 222 EAIERLGADSFLVSRDQDEMQAAMGTM----DGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277
+ + + GA R+ + + + II + A L + LL G++++V
Sbjct: 67 KIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVV 126
Query: 278 GAPEKPLELPAFSLLMGRKIVGGSMIGGM--KETQEMID 314
G+ +E+ + + G + +E Q+
Sbjct: 127 GSRG-TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAA 164
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 41.2 bits (95), Expect = 5e-05
Identities = 29/178 (16%), Positives = 59/178 (33%), Gaps = 10/178 (5%)
Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 221
A A +T + L G PG V + G +A M + K
Sbjct: 4 ATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR 63
Query: 222 EAIERLGADSFLVSRDQDEMQAAMGTMDG----IIDTVSAVHPLMPLIGLLKSQGKLVLV 277
E + RLG + SR D + DG ++ A + + +L G+ + +
Sbjct: 64 EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIEL 123
Query: 278 GAPEKPLELPAFSLLMGRKI------VGGSMIGGMKETQEMIDFAAKHNIRADIEVIP 329
G + + + + + ++ ++++ +H +EV+P
Sbjct: 124 GKKDVYADASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP 181
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 39.4 bits (91), Expect = 1e-04
Identities = 10/89 (11%), Positives = 27/89 (30%), Gaps = 5/89 (5%)
Query: 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIM-----TYANKYHDGTITYGGYSDIMVADEH 147
+V + + A + P + + + + GG ++ + +
Sbjct: 31 RVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKG 90
Query: 148 FVVRIPEGTPLDATAPLLCAGITVYSPLR 176
++ +PEG P+ + L
Sbjct: 91 ALLPLPEGRPVVGPVFPFAEAEAAFRALL 119
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 38.1 bits (87), Expect = 7e-04
Identities = 21/163 (12%), Positives = 45/163 (27%), Gaps = 15/163 (9%)
Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSK 219
A + +T Y L Y PG + +G A + K + +
Sbjct: 7 ATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 66
Query: 220 ---KSEAIERLGADSFLVSRDQDEMQ----------AAMGTMDGIIDTVSAVHPLMPLIG 266
+++ LGA + + + + G ++ V
Sbjct: 67 LDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARK 126
Query: 267 LLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKET 309
L + L G +P+ +P + G + + +
Sbjct: 127 LNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKN 169
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 35.6 bits (81), Expect = 0.004
Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 23/165 (13%)
Query: 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 221
L T Y G+ PG V V G G +G A A+ +G V ++ +
Sbjct: 5 TCLSDILPTGYHGAVTAGV-GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL 63
Query: 222 EAIERLGADSFLVSRDQDEMQAAMGTMDG-----IIDTV---------------SAVHPL 261
+ G + +S D + + +D V + L
Sbjct: 64 AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123
Query: 262 MPLIGLLKSQGKLVLVG--APEKPLELPAFSLLMGRKIVGGSMIG 304
L+ + + GK+ + G E P + A + + I G
Sbjct: 124 NSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWA 168
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 361 | |||
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 100.0 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 100.0 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 100.0 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 100.0 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 100.0 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 100.0 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 100.0 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 100.0 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 100.0 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 100.0 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.98 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.98 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.97 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.97 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.97 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.97 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.97 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.96 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.94 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.94 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.94 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.94 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.94 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.93 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.93 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.93 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.93 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.93 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.93 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.93 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.92 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.92 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.92 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.92 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.92 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.91 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.91 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.91 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.91 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.91 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.9 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.9 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.9 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.89 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.89 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.89 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.87 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.87 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.87 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.84 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.83 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.6 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.6 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.39 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.45 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 98.25 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.16 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.01 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.97 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.92 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.89 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.87 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.86 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.82 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.82 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.76 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.76 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.74 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.72 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.72 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.69 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.68 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 97.68 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 97.64 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.63 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.63 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.63 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.63 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.62 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.59 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.59 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.58 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.58 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.57 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.56 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.55 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.54 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.5 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.49 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.44 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 97.39 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.36 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.36 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.33 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.32 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.32 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.3 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.28 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.26 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.26 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.24 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.22 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 97.21 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 97.21 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.21 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 97.19 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 97.16 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.15 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.14 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.13 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.11 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.11 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.11 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 97.08 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 97.07 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.05 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.02 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.99 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 96.98 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.96 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 96.94 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.9 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.86 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.75 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 96.68 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.65 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.64 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.64 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.56 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 96.54 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.52 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 96.46 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.46 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 96.42 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.41 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.35 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 96.34 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 96.25 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 96.18 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.15 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.15 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 96.15 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.11 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 96.11 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.08 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.06 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.04 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 96.01 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 95.99 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.93 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 95.9 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.88 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 95.87 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 95.84 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 95.83 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 95.79 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.78 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 95.77 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 95.75 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 95.74 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 95.72 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 95.66 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.57 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.55 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.55 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 95.45 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 95.44 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 95.42 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 95.41 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.41 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.38 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.37 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 95.37 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 95.36 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.35 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.34 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 95.33 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 95.32 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.26 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 95.23 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 95.22 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 95.15 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 95.11 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 95.09 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 95.02 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 95.01 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.99 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 94.92 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.89 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 94.89 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 94.83 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 94.78 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 94.75 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.73 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 94.7 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 94.63 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 94.59 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.54 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.53 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.5 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 94.49 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 94.46 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.35 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 94.35 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 94.35 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 94.23 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 94.23 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 94.21 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 94.2 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 94.15 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 94.15 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 94.12 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.11 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.94 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 93.8 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 93.75 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 93.75 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.69 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.69 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 93.65 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 93.58 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 93.56 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 93.51 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.5 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 93.5 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.41 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.4 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 93.38 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 93.35 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 93.34 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 93.19 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.17 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 93.14 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 93.09 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 93.07 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 92.98 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.96 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 92.96 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.92 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 92.87 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 92.82 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 92.78 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 92.65 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.62 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.6 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 92.59 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 92.59 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.56 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 92.42 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 92.35 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 92.35 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 92.35 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.33 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 92.24 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 92.23 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 92.2 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 92.13 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 91.96 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 91.93 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 91.9 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 91.76 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.66 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 91.64 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 91.64 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 91.61 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 91.59 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 91.58 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 91.53 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 91.5 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 91.42 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 91.39 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 91.37 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 91.34 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.32 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 91.27 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 91.26 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 91.05 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 90.98 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 90.91 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 90.85 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 90.81 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 90.8 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 90.8 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 90.77 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 90.69 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 90.55 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 90.52 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 90.51 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 90.5 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 90.47 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 90.33 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 90.31 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 90.19 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 90.09 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 89.96 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 89.93 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 89.74 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 89.73 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 89.64 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 89.64 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 89.56 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 89.42 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 89.39 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 89.39 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 89.37 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 89.3 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 89.25 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 89.13 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 89.07 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.97 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.93 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 88.82 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 88.82 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 88.73 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 88.65 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 88.39 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 88.22 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 88.17 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 88.14 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 88.1 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 88.1 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 87.95 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 87.86 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 87.85 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 87.83 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 87.79 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 87.73 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 87.58 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 87.42 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 87.31 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 87.23 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 87.05 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 86.97 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 86.93 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 86.91 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 86.91 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 86.76 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 86.72 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 86.71 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 86.65 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 86.61 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 86.36 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 85.64 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 85.5 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 85.37 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 85.37 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 85.33 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 85.28 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 85.17 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 85.13 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 85.13 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 85.12 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 85.08 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 84.79 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 84.78 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 84.69 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 84.58 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 84.32 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 84.21 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 84.21 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 84.18 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 84.17 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 84.12 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 83.79 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 83.69 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 83.52 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 82.94 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 82.74 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 82.73 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 82.57 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 82.37 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 82.22 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 82.12 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 82.09 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 82.03 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 82.0 | |
| d1fcja_ | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 81.97 | |
| d1vl6a1 | 222 | Malate oxidoreductase (malic enzyme) {Thermotoga m | 81.97 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 81.8 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 81.77 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 81.53 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 81.24 | |
| d2cula1 | 230 | GidA-related protein TTHA1897 {Thermus thermophilu | 81.22 | |
| d1p3ha_ | 99 | Chaperonin-10 (GroES) {Mycobacterium tuberculosis | 81.22 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 81.22 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 81.19 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 80.69 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 80.39 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 80.39 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 80.31 |
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=4.9e-36 Score=252.87 Aligned_cols=184 Identities=20% Similarity=0.243 Sum_probs=157.9
Q ss_pred CcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCC
Q 018094 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
|.+.+|+..+..+.+..+.|++++++.|+|+++|||||+.++|||++|++.+.|.+....+|.++|||++|+|+++|+++
T Consensus 2 ~~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v 81 (199)
T d1cdoa1 2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGV 81 (199)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTC
T ss_pred CCCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCC
Confidence 34556676666665566679999999999999999999999999999999999977777889999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccc-cCC-------------CcccCCccceEEEeccCceEE
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANK-YHD-------------GTITYGGYSDIMVADEHFVVR 151 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~-~~~-------------~~~~~g~~~~~~~v~~~~v~~ 151 (361)
++|++||||++.+. ..|++|.+|.+|.++.|.+........ ... +....|+|+||+.+++.++++
T Consensus 82 ~~~~~GdrV~~~~~-~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~ 160 (199)
T d1cdoa1 82 TEFQPGEKVIPLFI-SQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK 160 (199)
T ss_dssp CSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred ceecCCCEEEEeee-ccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEE
Confidence 99999999977665 499999999999999998864332211 111 112359999999999999999
Q ss_pred CCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEE
Q 018094 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 152 iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
||++++++++|++.+++.|++.++......+.|++|||+
T Consensus 161 iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 161 IDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp CCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 999999999999999999999999998888999999984
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.2e-36 Score=250.22 Aligned_cols=183 Identities=32% Similarity=0.568 Sum_probs=159.7
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCC-
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV- 85 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~- 85 (361)
.|.+|+++++...+....++..+++.++++|+|||||+.++|||++|++.+.|.++...+|.++|||++|+|+++|+++
T Consensus 3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~ 82 (192)
T d1piwa1 3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN 82 (192)
T ss_dssp TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccccc
Confidence 3556666666555555667777777777899999999999999999999999988878899999999999999999988
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccc
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLL 165 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~ 165 (361)
+.+++||||.+.+....|+.|.+|+.|.++.|++....+......|....|+|+||+.+|+++++++|+++++++|+.+.
T Consensus 83 ~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal~~ 162 (192)
T d1piwa1 83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGE 162 (192)
T ss_dssp SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEESSH
T ss_pred cccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHHHH
Confidence 56999999999999999999999999999999998877777777788889999999999999999999999998876665
Q ss_pred hhhhhhhHHHHhhCCCCCCCEEEEE
Q 018094 166 CAGITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 166 ~~~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
+.+.+||+++. .+.++++++|||.
T Consensus 163 ~~~~ta~~~l~-~~~vk~g~~Vvv~ 186 (192)
T d1piwa1 163 AGVHEAFERME-KGDVRYRFTLVGY 186 (192)
T ss_dssp HHHHHHHHHHH-HTCCSSEEEEECC
T ss_pred HHHHHHHHHHH-HhCCCCCCEEEEE
Confidence 55779999997 4679999999985
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=6.5e-35 Score=241.44 Aligned_cols=174 Identities=28% Similarity=0.460 Sum_probs=153.7
Q ss_pred CcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCC
Q 018094 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSK 84 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~ 84 (361)
++|.+|+++++...+. .|+++++|.|.|+++|||||+++++||++|++.++|.++. ..+|.++|||++|+|+++|++
T Consensus 1 ~~P~tMkA~v~~~~g~--pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~ 78 (175)
T d1llua1 1 TLPQTMKAAVVHAYGA--PLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSG 78 (175)
T ss_dssp CCCSEEEEEEBCSTTS--CCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTT
T ss_pred CcchhcEEEEEEeCCC--CCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCC
Confidence 4788899888755433 4889999999999999999999999999999999997753 478999999999999999999
Q ss_pred CCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccccccc
Q 018094 85 VSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPL 164 (361)
Q Consensus 85 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l 164 (361)
+++|++||||++.+....|+.|.+|..|.++.|.+.... |...+|+|+||+.+++++++++|++++++.++++
T Consensus 79 v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~-------G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~ 151 (175)
T d1llua1 79 VTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGILPKNVKATIHPGK 151 (175)
T ss_dssp CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTCCCCEEEEC
T ss_pred ccccccCCEEEeccccccCCccccccCCccccccccccc-------ccccccccceEEEechHHEEECCCCCChhHHHHH
Confidence 999999999999888889999999999999999886443 4567899999999999999999999999989888
Q ss_pred chhhhhhhHHHHhhCCCCCCCEEEEE
Q 018094 165 LCAGITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 165 ~~~~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
.+++.++++.++. +. .+|++|||+
T Consensus 152 ~~~~~t~~~~~~~-g~-~~G~~VLVl 175 (175)
T d1llua1 152 LDDINQILDQMRA-GQ-IEGRIVLEM 175 (175)
T ss_dssp GGGHHHHHHHHHT-TC-CSSEEEEEC
T ss_pred HhHHHHHHHHHHh-CC-CCCCEEEeC
Confidence 8899999988753 33 579999984
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=100.00 E-value=1.6e-35 Score=245.74 Aligned_cols=171 Identities=23% Similarity=0.317 Sum_probs=148.2
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC---CCCCCCcccccccEEEEEeCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG---NAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
+|+++.+ +++.|+++++|.|+|+++|||||+++++||++|++.+.+.+. ...+|.++|||++|+|+++|++++
T Consensus 2 ~maAVl~----g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~ 77 (178)
T d1e3ja1 2 NLSAVLY----KQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK 77 (178)
T ss_dssp CEEEEEE----ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred ceEEEEE----cCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccC
Confidence 3555543 466799999999999999999999999999999998876432 235688999999999999999999
Q ss_pred CCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccch
Q 018094 87 KFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLC 166 (361)
Q Consensus 87 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~ 166 (361)
+|++||||++.+.. .|+.|.+|..|.++.|++..+.. +...+|+|+||+.+|+++++++|+++++++|+++++
T Consensus 78 ~~~~GdrV~~~~~~-~~~~c~~c~~g~~~~c~~~~~~~------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~ 150 (178)
T d1e3ja1 78 HLKKGDRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCA------TPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSF 150 (178)
T ss_dssp SCCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEETT------BTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEE
T ss_pred CCCCCCEEEECccc-ccCCccccccCCcccccccccee------ccccccccceeeeecccceeeCCCCCCHHHHHHHHh
Confidence 99999999886655 89999999999999998865432 224579999999999999999999999999999999
Q ss_pred hhhhhhHHHHhhCCCCCCCEEEEEcc
Q 018094 167 AGITVYSPLRFYGLDKPGMHVGVVGL 192 (361)
Q Consensus 167 ~~~~a~~~l~~~~~~~~g~~VlI~Ga 192 (361)
.+.|||++++. .++++|++|+|+|+
T Consensus 151 ~~~ta~~a~~~-~~~~~g~~VlVig~ 175 (178)
T d1e3ja1 151 KLEQTVDAFEA-ARKKADNTIKVMIS 175 (178)
T ss_dssp EGGGHHHHHHH-HHHCCTTCSEEEEE
T ss_pred HHHHHHHHHHH-hCCCCCCEEEEEcc
Confidence 99999999875 45799999999875
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=100.00 E-value=3.8e-34 Score=240.38 Aligned_cols=180 Identities=20% Similarity=0.235 Sum_probs=152.2
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+|++.+..+.+..+.|+++++|.|+|+++||||||+++|||++|+++++|.+....+|.++|||++|+|+++|+++++++
T Consensus 4 ~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~ 83 (197)
T d2fzwa1 4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK 83 (197)
T ss_dssp CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecC
Confidence 34555555555666799999999999999999999999999999999999887778999999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccc--------------cccCCCcccCCccceEEEeccCceEECCCC
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA--------------NKYHDGTITYGGYSDIMVADEHFVVRIPEG 155 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~ 155 (361)
+||||++.+.. .|+.|.+|..|.++.|.+...... +....++...|+|+||+.+|+..++++|++
T Consensus 84 ~GdrV~v~~~~-~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~ 162 (197)
T d2fzwa1 84 AGDTVIPLYIP-QCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL 162 (197)
T ss_dssp TTCEEEECSSC-CCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred CCCEEEEcccc-ccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCCC
Confidence 99999877664 999999999999999987522111 111112233599999999999999999999
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEE
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
+++++|+++++++.+++.++.....-+.+++|||+
T Consensus 163 l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 163 IKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp SCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred CCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 99999999999999999998766655788999874
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=2e-33 Score=235.24 Aligned_cols=168 Identities=21% Similarity=0.423 Sum_probs=140.0
Q ss_pred cCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 19 RDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 19 ~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
...++.|+++++|.|+|+++|||||+.++|||++|++++.|.++ ..+|.+||||++|+|+++|+++++|++|||| +.+
T Consensus 10 ~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~vGDrV-v~~ 87 (194)
T d1f8fa1 10 PCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQVGDHV-VLS 87 (194)
T ss_dssp CSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCTTCEE-EEC
T ss_pred cCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEccCcee-eee
Confidence 34566799999999999999999999999999999999998776 4689999999999999999999999999999 455
Q ss_pred ccCCCCCCcccccCCCCCCcccc-cccccccCCC---------------cccCCccceEEEeccCceEECCCCCCccccc
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVI-MTYANKYHDG---------------TITYGGYSDIMVADEHFVVRIPEGTPLDATA 162 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~-~~~~~~~~~~---------------~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa 162 (361)
+. .|++|.+|++|.++.|++.. ..+.+...++ ....|+|+||..+++.+++++|++++++++
T Consensus 88 ~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~i~~~~~- 165 (194)
T d1f8fa1 88 YG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL- 165 (194)
T ss_dssp CC-CCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTTCCGGGG-
T ss_pred cc-cccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCCCCCcccE-
Confidence 55 79999999999999999862 2222222111 123489999999999999999999876543
Q ss_pred ccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEe
Q 018094 163 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214 (361)
Q Consensus 163 ~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~ 214 (361)
+++.|+|.+|++++|+++.+|++.++++
T Consensus 166 ------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV 193 (194)
T d1f8fa1 166 ------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI 193 (194)
T ss_dssp ------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred ------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 4556789999999999999999665543
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=100.00 E-value=1.3e-33 Score=238.75 Aligned_cols=181 Identities=22% Similarity=0.289 Sum_probs=150.5
Q ss_pred CcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCC
Q 018094 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
|+..+|++.+..+.+..+.|+++++|+|+|+++||||||.++|||++|++.++|.++ ..+|.++|||++|+|+++|+++
T Consensus 2 ~~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V 80 (202)
T d1e3ia1 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGV 80 (202)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTC
T ss_pred CCCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCc
Confidence 456677777777765556799999999999999999999999999999999998765 4679999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccc------------------cccCCCcccCCccceEEEeccC
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYA------------------NKYHDGTITYGGYSDIMVADEH 147 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~g~~~~~~~v~~~ 147 (361)
+++++||||++.+. ..|+.|.+|..|.++.|.+...... +....+....|+|+||+.+++.
T Consensus 81 ~~~~~GdrV~~~~~-~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~ 159 (202)
T d1e3ia1 81 TNFKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA 159 (202)
T ss_dssp CSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred eeccCCCEEEEEee-ccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehh
Confidence 99999999976654 5999999999999999987632111 0011122235999999999999
Q ss_pred ceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEc
Q 018094 148 FVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVG 191 (361)
Q Consensus 148 ~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~G 191 (361)
+++++|++++++.++++.+++.+++.++.. +|+|++|.|+.
T Consensus 160 ~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~ 200 (202)
T d1e3ia1 160 NLARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTIL 200 (202)
T ss_dssp GEEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred hEEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence 999999999999989998888888888754 47899988753
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.2e-33 Score=232.25 Aligned_cols=174 Identities=21% Similarity=0.289 Sum_probs=140.0
Q ss_pred cccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCC
Q 018094 7 QEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVS 86 (361)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~ 86 (361)
|+..|+++++.. ..+.|+++++|.|+++++||||||.++|||++|+++++|.++...+|.++|||++|+|+++|++++
T Consensus 1 m~~k~kA~v~~~--~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~ 78 (184)
T d1vj0a1 1 MGLKAHAMVLEK--FNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKR 78 (184)
T ss_dssp CCEEEEEEEBCS--TTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCB
T ss_pred CCceEEEEEEec--CCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccc
Confidence 344555555543 334599999999999999999999999999999999999887778999999999999999999986
Q ss_pred -----CCCCCCEEEEccccCCCCCCcccccCCC-CCCccccc-ccccccCCCcccCCccceEEEec-cCceEECCCCCCc
Q 018094 87 -----KFKVGDKVGVGCMVGSCRSCDSCAIDLE-NYCPKVIM-TYANKYHDGTITYGGYSDIMVAD-EHFVVRIPEGTPL 158 (361)
Q Consensus 87 -----~~~~Gd~V~~~~~~~~c~~c~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~v~-~~~v~~iP~~~~~ 158 (361)
++++||||++.+.. .|++|.+|+.|.+ +.|++... ++.+........+|+|+||+.++ +.+++++|+++++
T Consensus 79 ~~~~~~~~~Gd~V~~~~~~-~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~ 157 (184)
T d1vj0a1 79 DLNGELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH 157 (184)
T ss_dssp CTTSCBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCE
T ss_pred ccccccccceeeeEecccc-ccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCH
Confidence 46899999777655 9999999999985 56887643 33333333345689999999995 6899999999987
Q ss_pred ccccccchhhhhhhHHHHhhCCCCCCCEEEEE
Q 018094 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 159 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
+++ +.+|++++... .+++|++|||+
T Consensus 158 ~~p------l~~A~~a~~~~-~~~~G~~VlI~ 182 (184)
T d1vj0a1 158 RLP------LKEANKALELM-ESREALKVILY 182 (184)
T ss_dssp EEE------GGGHHHHHHHH-HHTSCSCEEEE
T ss_pred HHH------HHHHHHHHHHh-CCCcCCEEEEe
Confidence 642 34567777654 47999999997
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=2.8e-33 Score=230.10 Aligned_cols=157 Identities=25% Similarity=0.409 Sum_probs=140.1
Q ss_pred CCccceeeeccCC-CCCeEEEEEeeeccccchhhhhhCCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 23 GVLSPFHFSRRAT-GEKDVTFKVTHCGICHSDLHLIKNEWG---NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 23 ~~l~~~~~~~p~~-~~~~vlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
+.|++++++.|++ .++|||||+.+++||++|++.+.|.+. .+.+|.++|||++|+|+++|++++++++||||++.+
T Consensus 10 ~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~GdrV~~~~ 89 (171)
T d1h2ba1 10 KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHP 89 (171)
T ss_dssp SCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCCTTCEEEECS
T ss_pred CCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCCCCCEEEEcC
Confidence 4499999999985 689999999999999999999988653 346789999999999999999999999999998777
Q ss_pred ccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHhh
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRFY 178 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~ 178 (361)
.. .|++|.+|.+|.++.|.+..+. |....|+|+||+.++++.++++|++++++.++++.+++.|+|++++.
T Consensus 90 ~~-~cg~~~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al~~- 160 (171)
T d1h2ba1 90 AV-TDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLEK- 160 (171)
T ss_dssp CB-CCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHHHT-
T ss_pred cc-CCCCcccccccccccccccccc-------eeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHHHh-
Confidence 65 8999999999999999886543 44578999999999999999999999999899899999999999975
Q ss_pred CCCCCCCEEEE
Q 018094 179 GLDKPGMHVGV 189 (361)
Q Consensus 179 ~~~~~g~~VlI 189 (361)
..+ .|++|||
T Consensus 161 ~~~-~G~~VlI 170 (171)
T d1h2ba1 161 GEV-LGRAVLI 170 (171)
T ss_dssp TCC-SSEEEEE
T ss_pred cCC-CCCEEEe
Confidence 556 8999998
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-33 Score=232.81 Aligned_cols=164 Identities=20% Similarity=0.315 Sum_probs=138.1
Q ss_pred CCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC---CCCCCCcccccccEEEEEeCCCCCCCCCCCEEEE
Q 018094 20 DTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG---NAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGV 96 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~ 96 (361)
.+|+.|+++++|.|+|+++||||||++++||++|++.+++.+. ...+|.++|||++|+|+++|+++++|++||||++
T Consensus 14 ~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~ 93 (185)
T d1pl8a1 14 HGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAI 93 (185)
T ss_dssp EETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSCCTTCEEEE
T ss_pred eCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeeeccccccee
Confidence 3567899999999999999999999999999999999876432 2367889999999999999999999999999988
Q ss_pred ccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHH
Q 018094 97 GCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLR 176 (361)
Q Consensus 97 ~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~ 176 (361)
.+.. .|+.|.+|..|+++.|.+..+... ...+|+|+||+.+++++++++|+++++++|+.++. .+|+++++
T Consensus 94 ~~~~-~cg~c~~c~~G~~~~c~~~~~~g~------~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~pl--~~a~~a~~ 164 (185)
T d1pl8a1 94 EPGA-PRENDEFCKMGRYNLSPSIFFCAT------PPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFPL--EKALEAFE 164 (185)
T ss_dssp CSEE-CSSCCHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEEG--GGHHHHHH
T ss_pred ccee-ccccchhhccchhchhccceeeec------ccccccceEEEEEchHHEEECCCCCCHHHHHHHHH--HHHHHHHH
Confidence 7765 899999999999999988654321 24578999999999999999999999999886643 45566665
Q ss_pred hhCCCCCCCEEEEEccch
Q 018094 177 FYGLDKPGMHVGVVGLGG 194 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~ 194 (361)
... +++|++||| |+|+
T Consensus 165 ~~~-~~~G~~VlI-g~GP 180 (185)
T d1pl8a1 165 TFK-KGLGLKIML-KCDP 180 (185)
T ss_dssp HHH-TTCCSEEEE-ECCT
T ss_pred HhC-CCCCCEEEE-EeCC
Confidence 544 689999998 5543
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.98 E-value=7.8e-35 Score=239.85 Aligned_cols=171 Identities=18% Similarity=0.220 Sum_probs=137.1
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKV 90 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~ 90 (361)
|+++++ ..++.++++++|.|.|+++|||||++++|||++|++.+.+......+|.++|||++|+|+++|+++++|++
T Consensus 1 MKa~v~---~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~v 77 (177)
T d1jqba1 1 MKGFAM---LGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKP 77 (177)
T ss_dssp CEEEEE---EETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred CeEEEE---EeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecC
Confidence 556555 34567999999999999999999999999999999888765555678999999999999999999999999
Q ss_pred CCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEecc--CceEECCCCCCcccccccchhh
Q 018094 91 GDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADE--HFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 91 Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~--~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
||||++.+.. .|++|.+|..+.++.|.+..... ..+...+|+|+||+++|. .+++++|+++++++++.....
T Consensus 78 GdrV~v~~~~-~cg~c~~C~~g~~~~c~~~~~~~----~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~- 151 (177)
T d1jqba1 78 GDRVIVPCTT-PDWRSLEVQAGFQQHSNGMLAGW----KFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYH- 151 (177)
T ss_dssp TCEEEECSCC-CCSSSHHHHTTCGGGTTSTTTTC----CBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEE-
T ss_pred CCcEEEeeee-ccccccchhhhhhcccccccccc----cccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHH-
Confidence 9999776554 99999999999999998764322 224456899999999985 479999999998877644332
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEccchHHHHHH
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAV 200 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~ 200 (361)
++..+ ++.+||.|+|++|++++
T Consensus 152 --~~~~~--------~~~vlv~g~gp~gl~aa 173 (177)
T d1jqba1 152 --GFDHI--------EEALLLMKDKPKDLIKA 173 (177)
T ss_dssp --SGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred --HHHHh--------cCceEEECCCHHHhhee
Confidence 22222 23477788888876554
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.98 E-value=3.1e-35 Score=247.32 Aligned_cols=182 Identities=23% Similarity=0.247 Sum_probs=148.9
Q ss_pred CCCCCccceeeeccCC-------CCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 018094 20 DTSGVLSPFHFSRRAT-------GEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92 (361)
Q Consensus 20 ~~~~~l~~~~~~~p~~-------~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd 92 (361)
..++.++++++|.|++ .++||+||+.+++||++|++++.|.++ ..+|.++|||++|+|+++|+++++|++||
T Consensus 8 ~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V~~~~vGd 86 (201)
T d1kola1 8 LGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDVENLQIGD 86 (201)
T ss_dssp EETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTCCSCCTTC
T ss_pred eCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeeccccccccccccc
Confidence 3456799999998864 469999999999999999999998776 47899999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCCCCCCccccc---ccccccCCCcccCCccceEEEecc--CceEECCCCCCcccccccchh
Q 018094 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIM---TYANKYHDGTITYGGYSDIMVADE--HFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 93 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~v~~--~~v~~iP~~~~~~~aa~l~~~ 167 (361)
||++.+ ...|++|.+|++|+++.|..... ....+.......+|+|+||+.+|. .++++|||+..+.+++++...
T Consensus 87 rV~v~~-~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~~~~~~~ 165 (201)
T d1kola1 87 LVSVPF-NVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEV 165 (201)
T ss_dssp EEECCS-EECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHTCCHHHH
T ss_pred eeEEee-eeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHHHHHHHHH
Confidence 998766 55999999999999998877532 111122223356799999999985 479999998877888888888
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV 208 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~ 208 (361)
+.++++++.... .+.++ +|+|++|++++|+||.+||
T Consensus 166 ~~~~~~a~~~~~-~~~g~----~g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 166 VGVQVISLDDAP-RGYGE----FDAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp HTEEEECGGGHH-HHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred HHHHHHHHHhCC-CCCeE----EeeCHHHHHHHHHHHHcCC
Confidence 888888776543 23343 5889999999999999886
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=3.9e-32 Score=223.88 Aligned_cols=169 Identities=30% Similarity=0.523 Sum_probs=141.4
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCC-CCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEW-GNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|++.++...+ +.|+++++|.|+|++||||||++++|||++|++.+++.+ ....+|.++|||++|+|+++|+++++++
T Consensus 1 MkA~v~~~~g--~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~ 78 (171)
T d1rjwa1 1 MKAAVVEQFK--EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLK 78 (171)
T ss_dssp CEEEEBSSTT--SCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CeEEEEecCC--CCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCce
Confidence 5666664433 449999999999999999999999999999999887643 3457889999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||||++.+....|+.|..|..+.++.|.+.... |...+|+|+||+.+++++++++|++++++.|+ +. ...
T Consensus 79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~-~~~ 149 (171)
T d1rjwa1 79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LE-KIN 149 (171)
T ss_dssp TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GG-GHH
T ss_pred eeeEEeeccccccccccccccCCCcccccccccc-------ceeccCccccceEecHHHEEECCCCCCHHHHH-HH-HHH
Confidence 9999999988889999999999999999886543 34567999999999999999999999986654 43 345
Q ss_pred hhhHHHHhhCCCCCCCEEEEEcc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVVGL 192 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~Ga 192 (361)
++++.+.+ +.+ +|++|||+|.
T Consensus 150 ~~~~~~~~-~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 150 EVFDRMLK-GQI-NGRVVLTLED 170 (171)
T ss_dssp HHHHHHHT-TCC-SSEEEEECCC
T ss_pred HHHHHHHh-cCC-CCCEEEEeCC
Confidence 66666654 444 5999999884
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=4.5e-32 Score=223.78 Aligned_cols=157 Identities=39% Similarity=0.751 Sum_probs=132.1
Q ss_pred cCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCCEEEEcc
Q 018094 19 RDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGC 98 (361)
Q Consensus 19 ~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd~V~~~~ 98 (361)
+++.+.|+++++|.|+|+++|||||+.++|||++|++.+.|.++...+|.+||||++|+|+++|++++++++||||.+.+
T Consensus 7 ~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdrV~v~~ 86 (179)
T d1uufa1 7 YSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGC 86 (179)
T ss_dssp SSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECS
T ss_pred ccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCCEEEEcc
Confidence 45667799999999999999999999999999999999999888788999999999999999999999999999999999
Q ss_pred ccCCCCCCcccccCCCCCCccccccccccc-CCCcccCCccceEEEeccCceEECCCCCCcccccccchhhhhhhHHHHh
Q 018094 99 MVGSCRSCDSCAIDLENYCPKVIMTYANKY-HDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGITVYSPLRF 177 (361)
Q Consensus 99 ~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~ 177 (361)
..+.|++|.+|++|.++.|++....+.+.. ..+....|+|+||+.+|+++++++|++.....+ ..++.++++++.+
T Consensus 87 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~~---a~~l~~a~~a~~~ 163 (179)
T d1uufa1 87 IVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIR---ADQINEAYERMLR 163 (179)
T ss_dssp EEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEEC---GGGHHHHHHHHHT
T ss_pred cccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChhH---hchhHHHHHHHHH
Confidence 999999999999999999998754443322 223345799999999999999999976533322 2345567777754
Q ss_pred h
Q 018094 178 Y 178 (361)
Q Consensus 178 ~ 178 (361)
.
T Consensus 164 a 164 (179)
T d1uufa1 164 G 164 (179)
T ss_dssp T
T ss_pred h
Confidence 3
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.97 E-value=2.6e-31 Score=223.76 Aligned_cols=180 Identities=21% Similarity=0.294 Sum_probs=145.0
Q ss_pred CcccccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCC
Q 018094 6 EQEHPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
|+-..|++.++.+.+.++.|+++++|.|+|+++||||||.++|||++|++.++|.++. .+|.++|||++|+|+++|+++
T Consensus 2 ~~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~-~~P~i~GHE~~G~Vv~vG~~v 80 (198)
T d2jhfa1 2 TAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGV 80 (198)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTC
T ss_pred CCCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc-ccceecccceeEEEEecCccc
Confidence 4566777777777767778999999999999999999999999999999999997764 689999999999999999999
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccC--------------CCcccCCccceEEEeccCceEE
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYH--------------DGTITYGGYSDIMVADEHFVVR 151 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~g~~~~~~~v~~~~v~~ 151 (361)
+++++||||++.+.. .|+.|.+|.++..+.|.+.......+.. ......|+|+||+++|+.++++
T Consensus 81 ~~~~vGdrV~v~~~~-~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~ 159 (198)
T d2jhfa1 81 TTVRPGDKVIPLFTP-QCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAK 159 (198)
T ss_dssp CSCCTTCEEEECSSC-CCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEE
T ss_pred cCcCCCCEEEEeeee-cccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEE
Confidence 999999999777655 9999999999999999987543221111 1112348999999999999999
Q ss_pred CCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEE
Q 018094 152 IPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 152 iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
+|++++++.++...+++.....+. ..+++|++|+|+
T Consensus 160 ~p~~~~~e~l~~~~~~~~~v~~g~---~~l~~G~~VaVi 195 (198)
T d2jhfa1 160 IDAAFALDPLITHVLPFEKINEGF---DLLRSGESIRTI 195 (198)
T ss_dssp CCTTSCCGGGEEEEEEGGGHHHHH---HHHHTTCCSEEE
T ss_pred CCCCCCHHHHHHHHHHHHhhhhCC---ceeeCCCEEEEE
Confidence 999999877665544444333222 225788988875
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.97 E-value=5e-32 Score=227.53 Aligned_cols=175 Identities=23% Similarity=0.289 Sum_probs=138.1
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
+||+.++ .++.+.|+++++|.|+|+++||||||.++|||++|++++.|.++. .+|.++|||++|+|+++|+++.+++
T Consensus 8 ~~KAav~--~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~-~~P~i~GHE~~G~Vv~~G~~v~~~~ 84 (198)
T d1p0fa1 8 TCKAAVA--WEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVTCVK 84 (198)
T ss_dssp EEEEEEB--SSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred EEEEEEE--ccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc-ccccccceeeeeeeeecCcccccCc
Confidence 4444443 344456999999999999999999999999999999999987764 7899999999999999999999999
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCccccccccccc-CC-------------CcccCCccceEEEeccCceEECCCC
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKY-HD-------------GTITYGGYSDIMVADEHFVVRIPEG 155 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~~g~~~~~~~v~~~~v~~iP~~ 155 (361)
+||||++.+. ..|++|.+|.+|.+++|++..+....+. .. .....|+|+||+.+++..++++|++
T Consensus 85 ~GdrV~~~~~-~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~ 163 (198)
T d1p0fa1 85 PGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPK 163 (198)
T ss_dssp TTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTT
T ss_pred CCCEEEEEee-ccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCC
Confidence 9999977665 5999999999999999998644221111 11 1112489999999999999999999
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHH
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHV 198 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~ 198 (361)
++.+.++...+...+ ++++++|||.|+|++|++
T Consensus 164 ~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl~ 196 (198)
T d1p0fa1 164 INVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSIM 196 (198)
T ss_dssp SCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEEE
T ss_pred CCHHHHHHhhcchhh----------cCCCCEEEEECCCcceEE
Confidence 998876655544332 234455788888887753
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.97 E-value=5.7e-31 Score=217.92 Aligned_cols=167 Identities=24% Similarity=0.363 Sum_probs=136.3
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCC--------CCCCCCcccccccEEEEEeC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWG--------NAIYPIVPGHEIVGVVTEVG 82 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~~lG~e~~G~V~~vG 82 (361)
||++.+...+.| |+++++|.|+|+++|||||+.++|||++|++.++|.++ ...+|+++|||++|+|+++|
T Consensus 1 MKA~~~~~~G~p--l~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g 78 (177)
T d1jvba1 1 MRAVRLVEIGKP--LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78 (177)
T ss_dssp CEEEEECSTTSC--CEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEEC
T ss_pred CeEEEEEeCCCC--CEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeec
Confidence 677777655444 89999999999999999999999999999999988643 23689999999999999999
Q ss_pred CCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCc-eEECCCCCCcccc
Q 018094 83 SKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHF-VVRIPEGTPLDAT 161 (361)
Q Consensus 83 ~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-v~~iP~~~~~~~a 161 (361)
+++.+|++||||++.+. ..|+.|.+|++|.++.|++..+. |...+|+|+||+.+++.. ++++|+..+.+.|
T Consensus 79 ~~v~~~~~GdrV~~~~~-~~c~~c~~~~~g~~~~c~~~~~~-------g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a 150 (177)
T d1jvba1 79 DEVVGYSKGDLVAVNPW-QGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKLRRVKPMITK 150 (177)
T ss_dssp TTCCSCCTTCEEEECCE-ECCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEECSSSCCCCEE
T ss_pred cCccccccCceEeeeec-cccccccccccccccccCCccee-------eeccccccccEEEEEhHHeEEECCCCChHHHH
Confidence 99999999999977665 48999999999999999987543 345679999999997654 6666665554444
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEE
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGV 189 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI 189 (361)
+.+..++.++++++..... .|++|||
T Consensus 151 ~~~~~~~~~a~~~~~~~~~--~G~~VlI 176 (177)
T d1jvba1 151 TMKLEEANEAIDNLENFKA--IGRQVLI 176 (177)
T ss_dssp EEEGGGHHHHHHHHHTTCC--CSEEEEE
T ss_pred HHHHHHHHHHHHHHHhhcc--cCCceEC
Confidence 4545678889998876542 5899987
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=5.8e-30 Score=205.42 Aligned_cols=147 Identities=21% Similarity=0.317 Sum_probs=133.0
Q ss_pred ccccceecccCCCCCccce-eeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPF-HFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
+|+++.+...++|+.|++. ++|.|+|+++||||||.+++||++|++...|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 81 (150)
T d1yb5a1 2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA 81 (150)
T ss_dssp EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence 6888888887888888875 68999999999999999999999999999987654 377899999999999999999999
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
|++||||+... ...|+|+||+.++++.++++|+++++++||+++++
T Consensus 82 ~~vGdrV~~~~----------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~ 127 (150)
T d1yb5a1 82 FKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLE 127 (150)
T ss_dssp CCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGG
T ss_pred cccCccccccc----------------------------------cccccccccccccccccccccCCCCHHHHHHhhhh
Confidence 99999997532 35799999999999999999999999999999999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEE
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVV 190 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~ 190 (361)
..|+|+.+...+..+.|+++||+
T Consensus 128 ~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 128 KVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp GHHHHHHHHHHSSCCSSEEEEEC
T ss_pred hhhehhhheEEcCcccCCEEEEC
Confidence 99999999888888999999984
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.6e-28 Score=196.50 Aligned_cols=142 Identities=18% Similarity=0.240 Sum_probs=124.1
Q ss_pred cceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCCCCCCCCC
Q 018094 13 AFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKVSKFKVGD 92 (361)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~~~~~~Gd 92 (361)
.+.+..+++|+.|+++++|.|.|+++||+||+++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 3 ~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd 82 (147)
T d1qora1 3 RIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGD 82 (147)
T ss_dssp EEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTC
T ss_pred EEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeecccccccc
Confidence 45566667888899999999999999999999999999999999999988788999999999999999999999999999
Q ss_pred EEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCccccc--ccchhhhh
Q 018094 93 KVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATA--PLLCAGIT 170 (361)
Q Consensus 93 ~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa--~l~~~~~~ 170 (361)
||+.. ....|+|+||..++.+.++++|+++++++|+ ++++...+
T Consensus 83 rV~~~----------------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~ 128 (147)
T d1qora1 83 RVVYA----------------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQ 128 (147)
T ss_dssp EEEES----------------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHH
T ss_pred eeeee----------------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHH
Confidence 99631 2356899999999999999999999888654 55667777
Q ss_pred hhHHHHhhCCCCCCCEEEE
Q 018094 171 VYSPLRFYGLDKPGMHVGV 189 (361)
Q Consensus 171 a~~~l~~~~~~~~g~~VlI 189 (361)
+++++.+ .++++|++|||
T Consensus 129 ~~~~l~~-~~~~~G~~VLI 146 (147)
T d1qora1 129 RAHEILE-SRATQGSSLLI 146 (147)
T ss_dssp HHHHHHH-TTCCCBCCEEE
T ss_pred HHHHHHH-hCCCCCCEEEe
Confidence 7777765 45799999997
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=2.1e-27 Score=194.62 Aligned_cols=164 Identities=32% Similarity=0.514 Sum_probs=144.5
Q ss_pred CcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
+.+.||++.|++.|+|+++++ .++++|++|+|+|+|++|++++|+||.+|++|++++++++++ +.++++|+++++++.
T Consensus 2 p~e~AApl~cag~Ta~~al~~-~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~a~~lGa~~~i~~~ 79 (168)
T d1piwa2 2 PSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYIATL 79 (168)
T ss_dssp CHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHHHHTCSEEEEGG
T ss_pred CHHHHHHHHHHHHHHHHHHHH-hCcCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHH-HHhhccCCcEEeecc
Confidence 456689999999999999986 468999999999999999999999999999999999988876 456999999998875
Q ss_pred C-HHHHHHhcCCccEEEEcCCCcc--cHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHHH
Q 018094 237 D-QDEMQAAMGTMDGIIDTVSAVH--PLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEMI 313 (361)
Q Consensus 237 ~-~~~~~~~~~g~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 313 (361)
+ .++.++..+++|+++||+++.. .+..++++++++|+++.+|.++....++...++.|++++.|+..++.+++++++
T Consensus 80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l 159 (168)
T d1piwa2 80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLL 159 (168)
T ss_dssp GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHH
T ss_pred chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHHH
Confidence 4 3556666779999999988754 467899999999999999988877788888889999999999999999999999
Q ss_pred HHHHcCCCc
Q 018094 314 DFAAKHNIR 322 (361)
Q Consensus 314 ~~l~~~~l~ 322 (361)
+|+++|+++
T Consensus 160 ~li~~gkIk 168 (168)
T d1piwa2 160 KLVSEKDIK 168 (168)
T ss_dssp HHHHHTTCC
T ss_pred HHHHhCCCC
Confidence 999999875
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=1e-27 Score=192.77 Aligned_cols=149 Identities=23% Similarity=0.256 Sum_probs=127.3
Q ss_pred ccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCC
Q 018094 10 PKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKF 88 (361)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~ 88 (361)
+|+++++...+++..++++++|.|+|++|||||||.++|||++|++.+.|.++. ...|.++|||++|+|++ +.++.|
T Consensus 3 ~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~ 80 (152)
T d1xa0a1 3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRF 80 (152)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSC
T ss_pred ceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCcc
Confidence 889998877766667888999999999999999999999999999988886653 36889999999999999 567789
Q ss_pred CCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhh
Q 018094 89 KVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAG 168 (361)
Q Consensus 89 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~ 168 (361)
++||+|+...+. .+...+|+|+||+.+|++.++++|++++ .+||+++++.
T Consensus 81 ~~g~~v~~~~~~-----------------------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~ 130 (152)
T d1xa0a1 81 REGDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAE 130 (152)
T ss_dssp CTTCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGG
T ss_pred ccCCEEEEecCc-----------------------------cccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHH
Confidence 999999743211 1234579999999999999999999998 5788899999
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEc
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVG 191 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~G 191 (361)
+|+|.++.....++ |++|||+|
T Consensus 131 ~ta~~~~~~~~~~~-G~tVL~l~ 152 (152)
T d1xa0a1 131 LPQALKRILRGELR-GRTVVRLA 152 (152)
T ss_dssp HHHHHHHHHHTCCC-SEEEEECC
T ss_pred HHHHHHHHHhcCCC-CCEEEEcC
Confidence 99998888888765 99999975
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.94 E-value=6.9e-27 Score=191.30 Aligned_cols=162 Identities=35% Similarity=0.631 Sum_probs=144.9
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
+++++||+++|++.|||+++++ .++++|++|+|+|+|++|++++|+||.+|++|++++++++++ +.++++|+++++++
T Consensus 1 v~f~~aA~l~ca~~Ta~~al~~-~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~-~~a~~~Ga~~~i~~ 78 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGLKQ-TNARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKL-ELARKLGASLTVNA 78 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHH-HhhhccCccccccc
Confidence 5789999999999999999986 568999999999999999999999999999999999888776 55689999999988
Q ss_pred CCHHH---HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHH
Q 018094 236 RDQDE---MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312 (361)
Q Consensus 236 ~~~~~---~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 312 (361)
.+++. +.+.+.+.|.++++.++...++.++++++++|+++.+|.+.+...++...++.|++++.|++.+++++++++
T Consensus 79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~e~ 158 (166)
T d1llua2 79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEA 158 (166)
T ss_dssp TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHHHHHHH
Confidence 77544 334456788888888888889999999999999999998887888999999999999999999999999999
Q ss_pred HHHHHcC
Q 018094 313 IDFAAKH 319 (361)
Q Consensus 313 ~~~l~~~ 319 (361)
++|+++|
T Consensus 159 l~l~~~G 165 (166)
T d1llua2 159 LDFAGEG 165 (166)
T ss_dssp HHHHHTT
T ss_pred HHHHHCc
Confidence 9999987
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.9e-26 Score=188.87 Aligned_cols=164 Identities=52% Similarity=0.836 Sum_probs=142.5
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
.++..+|+++|+..|+|+++++ .++++|++|||+|+|++|++++|+||.+|+++++++++++++ ++++++|+++++++
T Consensus 4 ~~~a~~Apl~Cag~Tay~al~~-~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lGad~~i~~ 81 (168)
T d1uufa2 4 EQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVVNS 81 (168)
T ss_dssp GGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTCSEEEET
T ss_pred ccHHHHHHHHhHHHHHHHHHHH-hCCCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHH-HHHhccCCcEEEEC
Confidence 3466788999999999999975 678999999999999999999999999999999988888765 56699999999999
Q ss_pred CCHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEecccCCHHHHHHHHH
Q 018094 236 RDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMIGGMKETQEMID 314 (361)
Q Consensus 236 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 314 (361)
.+++...+..+++|++||++|+..++..++++++++|+++.+|...+. ..++...++.|++++.|++.++.++++++++
T Consensus 82 ~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e~l~ 161 (168)
T d1uufa2 82 RNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLD 161 (168)
T ss_dssp TCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHH
T ss_pred chhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHHHHH
Confidence 888776666679999999999988899999999999999999986654 4667788889999999999999999999999
Q ss_pred HHHcCCC
Q 018094 315 FAAKHNI 321 (361)
Q Consensus 315 ~l~~~~l 321 (361)
|++++++
T Consensus 162 l~a~~~I 168 (168)
T d1uufa2 162 FCAEHGI 168 (168)
T ss_dssp HHHHHTC
T ss_pred HHHHcCC
Confidence 9998764
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.94 E-value=2.6e-26 Score=189.11 Aligned_cols=165 Identities=22% Similarity=0.279 Sum_probs=141.0
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
++++.|++++|++.|||+++.+..++++|++|+|+|+|++|++++|+|+.+|++++++++..+.+.+++++||+++++++
T Consensus 1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~ 80 (174)
T d1f8fa2 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 80 (174)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence 35778999999999999999998999999999999999999999999999999666655555555677799999999988
Q ss_pred CCHH---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccCC---H
Q 018094 236 RDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG---M 306 (361)
Q Consensus 236 ~~~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~ 306 (361)
++++ .++++++ ++|+||||+|+..+++.++++++++|+++.+|.... ...++...++.|++++.|++.++ .
T Consensus 81 ~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~ 160 (174)
T d1f8fa2 81 KTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPK 160 (174)
T ss_dssp TTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCHH
T ss_pred CCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCChH
Confidence 7754 4455554 799999999998888999999999999999997543 46788889999999999997544 5
Q ss_pred HHHHHHHHHHHcCC
Q 018094 307 KETQEMIDFAAKHN 320 (361)
Q Consensus 307 ~~~~~~~~~l~~~~ 320 (361)
++++++++++++|+
T Consensus 161 ~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 161 KFIPELVRLYQQGK 174 (174)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCC
Confidence 77999999999985
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=9.8e-26 Score=184.76 Aligned_cols=165 Identities=33% Similarity=0.600 Sum_probs=147.9
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
+++++||+++|++.|||++++... +++|++|||+|+|++|++++|+++..|++|++++.++++. +.++++|++.++++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al~~~~-~~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~-~~~k~~Ga~~~~~~ 78 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKALKVTG-AKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKL-ELAKELGADLVVNP 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHHT-CCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHh-hhhhhcCcceeccc
Confidence 578999999999999999998654 8999999999999999999999999999999998888776 45699999999988
Q ss_pred CCH---HHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHHH
Q 018094 236 RDQ---DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQEM 312 (361)
Q Consensus 236 ~~~---~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 312 (361)
.+. +.+.+.+.+.|.+++++++..+++.++++++++|+++.+|...+...++...++.+++++.|+..++.++++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~ 158 (168)
T d1rjwa2 79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEA 158 (168)
T ss_dssp TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHHHH
Confidence 764 34556677877777888888889999999999999999999888888899999999999999999999999999
Q ss_pred HHHHHcCCCc
Q 018094 313 IDFAAKHNIR 322 (361)
Q Consensus 313 ~~~l~~~~l~ 322 (361)
++++++|+++
T Consensus 159 l~l~~~Gkik 168 (168)
T d1rjwa2 159 LQFAAEGKVK 168 (168)
T ss_dssp HHHHHTTSCC
T ss_pred HHHHHhCCCC
Confidence 9999999875
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=5.8e-26 Score=187.11 Aligned_cols=161 Identities=22% Similarity=0.300 Sum_probs=139.1
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
+++++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+||.+|++|+++++++++. ++++++|+++++|
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~~~Ga~~vi~ 79 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVLQNGAHEVFN 79 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccc-ccccccCcccccc
Confidence 5789999999999999999998888999999999997 9999999999999999999999887665 5668999999999
Q ss_pred CCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEeccc--CCHH
Q 018094 235 SRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMI--GGMK 307 (361)
Q Consensus 235 ~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~--~~~~ 307 (361)
+++++. +.+.++ ++|++||++|+.. ++.++++++++|+++.+|..+ ..+++...++.|++++.|+.. .+.+
T Consensus 80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~ 157 (174)
T d1yb5a2 80 HREVNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSSTKE 157 (174)
T ss_dssp TTSTTHHHHHHHHHCTTCEEEEEESCHHHH-HHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGGCCHH
T ss_pred cccccHHHHhhhhhccCCceEEeecccHHH-HHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecCCCHH
Confidence 887654 444444 6999999999764 999999999999999999744 567788888999999999864 3567
Q ss_pred HHHHHHHHHHcC
Q 018094 308 ETQEMIDFAAKH 319 (361)
Q Consensus 308 ~~~~~~~~l~~~ 319 (361)
+++++++++.++
T Consensus 158 ~~~~~~~~l~~g 169 (174)
T d1yb5a2 158 EFQQYAAALQAG 169 (174)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888888765
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=1.1e-26 Score=181.09 Aligned_cols=129 Identities=20% Similarity=0.316 Sum_probs=113.3
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC-CCCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN-AIYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++.+...++ .+++++++.|+|+++||+||++++|||++|++.++|.++. ..+|+++|||++|+|+
T Consensus 1 MkA~~~~~~G~--~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~Vv---------- 68 (131)
T d1iz0a1 1 MKAWVLKRLGG--PLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE---------- 68 (131)
T ss_dssp CEEEEECSTTS--CEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET----------
T ss_pred CcEEEEccCCC--CCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEeec----------
Confidence 56666655443 4889999999999999999999999999999999997754 4789999999999993
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
||||+. ....|+|+||+.+++++++++|+++++++||++++.+.
T Consensus 69 -Gd~V~~-----------------------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ 112 (131)
T d1iz0a1 69 -GRRYAA-----------------------------------LVPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAE 112 (131)
T ss_dssp -TEEEEE-----------------------------------ECSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHH
T ss_pred -cceEEE-----------------------------------EeccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHH
Confidence 999974 24579999999999999999999999999999999999
Q ss_pred hhhHHHHhhCCCCCCCEEEE
Q 018094 170 TVYSPLRFYGLDKPGMHVGV 189 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI 189 (361)
|||+++.+.+ +.|++||+
T Consensus 113 Ta~~al~~~g--~~g~tvl~ 130 (131)
T d1iz0a1 113 AAFRALLDRG--HTGKVVVR 130 (131)
T ss_dssp HHHHHTTCTT--CCBEEEEE
T ss_pred HHHHHHHhcc--cCCCEEEE
Confidence 9999998776 56999986
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.93 E-value=4.3e-26 Score=187.24 Aligned_cols=163 Identities=29% Similarity=0.375 Sum_probs=143.5
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEe
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFL 233 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~ 233 (361)
+++.+||+++|++.|||+++++ .++++|++|+|+|+ |++|++++|+++.+|. +|++++.+++++ ++++++|+++++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al~~-~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~-~~~~~~Ga~~~i 78 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKRAGADYVI 78 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhH-HHHHHcCCceee
Confidence 5788999999999999999976 55899999999996 9999999999999996 777777776665 666899999999
Q ss_pred cCCCHHH---HHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHH
Q 018094 234 VSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKE 308 (361)
Q Consensus 234 ~~~~~~~---~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 308 (361)
++++++. +.+.+. ++|++|||+|+..+++.++++++++|+++.+|....+..++...++.|++++.|++.+++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d 158 (170)
T d1jvba2 79 NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSD 158 (170)
T ss_dssp ETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHH
T ss_pred ccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHH
Confidence 8776543 444443 69999999999887899999999999999999988888999999999999999999999999
Q ss_pred HHHHHHHHHcCC
Q 018094 309 TQEMIDFAAKHN 320 (361)
Q Consensus 309 ~~~~~~~l~~~~ 320 (361)
++++++++++||
T Consensus 159 ~~~~l~lv~~GK 170 (170)
T d1jvba2 159 FLGIMRLAEAGK 170 (170)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHcCC
Confidence 999999999985
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=8.2e-26 Score=185.04 Aligned_cols=166 Identities=18% Similarity=0.244 Sum_probs=136.5
Q ss_pred CCcccccccchhhhhhhHHHH---hhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE
Q 018094 156 TPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS 231 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~ 231 (361)
++++|||+++++++|||++++ ..+..++|++|||+|+ |++|.+++|+||.+|++|+++++++++. +.++++|+++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~-~~~~~lGa~~ 79 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEH-DYLRVLGAKE 79 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCH-HHHHHTTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHH-HHHHhcccce
Confidence 588999999999999996654 5677789999999997 9999999999999999999999998886 5568999999
Q ss_pred EecCCCHH--HHHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEec--ccCC
Q 018094 232 FLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGS--MIGG 305 (361)
Q Consensus 232 v~~~~~~~--~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~--~~~~ 305 (361)
++++++.. .+.... +++|+|||++|+.. +..++++|+++|+++.+|...+ ...++...++.|++++.|. ...+
T Consensus 80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv~~~~~~ 158 (176)
T d1xa0a2 80 VLAREDVMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCP 158 (176)
T ss_dssp EEECC---------CCSCCEEEEEECSTTTT-HHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCC
T ss_pred eeecchhHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEEeCCcCC
Confidence 99986532 222222 38999999999986 9999999999999999998754 4689999999999999995 4455
Q ss_pred HHHHHHHHHHHHcCCCcee
Q 018094 306 MKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 306 ~~~~~~~~~~l~~~~l~~~ 324 (361)
.+....+++.++ ++++|.
T Consensus 159 ~~~~~~~~~~la-g~lkP~ 176 (176)
T d1xa0a2 159 MDLRLRIWERLA-GDLKPD 176 (176)
T ss_dssp HHHHHHHHHHHH-TTTCCC
T ss_pred HHHHHHHHHHHh-cccCCC
Confidence 677777777774 777763
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.93 E-value=1.8e-25 Score=183.73 Aligned_cols=161 Identities=30% Similarity=0.443 Sum_probs=138.5
Q ss_pred cccccccchhhhhhhHHHHhhC-CCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 158 LDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 158 ~~~aa~l~~~~~~a~~~l~~~~-~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
+.++|+++|++.|||+++.+.. .+++|++|||+|+|++|++++|+++.+|+ +|+++++++++ .++++++|+++++++
T Consensus 6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k-~~~~~~~ga~~~i~~ 84 (172)
T d1h2ba2 6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEK-LKLAERLGADHVVDA 84 (172)
T ss_dssp HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHH-HHHHHHTTCSEEEET
T ss_pred HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHH-HHHHhhcccceeecC
Confidence 5678999999999999998876 47999999999999999999999999998 55555555554 567799999999988
Q ss_pred CCHH--HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHHHHHH
Q 018094 236 RDQD--EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMKETQE 311 (361)
Q Consensus 236 ~~~~--~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 311 (361)
++++ ...+.++ ++|++||++|+..+++.++++++++|+++.+|.. ...+++...++.|++++.|++.++++++++
T Consensus 85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~-~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~~ 163 (172)
T d1h2ba2 85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELHE 163 (172)
T ss_dssp TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCS-SCCCCCHHHHHHTTCEEEECCSCCHHHHHH
T ss_pred cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCc-ccccCCHHHHHhCCcEEEEEEecCHHHHHH
Confidence 6632 3444443 7999999999988799999999999999999964 457888889999999999999999999999
Q ss_pred HHHHHHcCC
Q 018094 312 MIDFAAKHN 320 (361)
Q Consensus 312 ~~~~l~~~~ 320 (361)
+++|+++|+
T Consensus 164 ~l~l~~~GK 172 (172)
T d1h2ba2 164 LVTLALQGK 172 (172)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHHcCC
Confidence 999999985
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.93 E-value=8.1e-25 Score=179.47 Aligned_cols=162 Identities=20% Similarity=0.325 Sum_probs=133.3
Q ss_pred CcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
+.++||+++|++.|+|+++.+.+++++|++|+|+|+|++|++++|++|.+|++ |++++.+++ +.+++++||+++++++
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~-r~~~a~~~Ga~~~i~~ 80 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGE-KFPKAKALGATDCLNP 80 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCSEEECG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchH-HHHHHHHhCCCcccCC
Confidence 45789999999999999998888999999999999999999999999999995 555555554 5678899999999875
Q ss_pred CCH----HHHHHh-c-CCccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCCCcccChHHHhhCCcEEEecccCC---
Q 018094 236 RDQ----DEMQAA-M-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGG--- 305 (361)
Q Consensus 236 ~~~----~~~~~~-~-~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~--- 305 (361)
... ....+. . +|+|++|||+|++.+++.++++++++ |+++.+|.+.+...++...++. +.++.|++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~~~ 159 (174)
T d1e3ia2 81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGWKS 159 (174)
T ss_dssp GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGCCH
T ss_pred ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCCCh
Confidence 432 222222 2 38999999999998899999999996 9999999987777888777654 56888887654
Q ss_pred HHHHHHHHHHHHcCC
Q 018094 306 MKETQEMIDFAAKHN 320 (361)
Q Consensus 306 ~~~~~~~~~~l~~~~ 320 (361)
.++++++++++++||
T Consensus 160 ~~d~p~li~l~~~GK 174 (174)
T d1e3ia2 160 VDSVPNLVSDYKNKK 174 (174)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCcC
Confidence 567888999998875
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.92 E-value=5.8e-25 Score=182.44 Aligned_cols=161 Identities=24% Similarity=0.384 Sum_probs=137.5
Q ss_pred cccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 158 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
++.+|++.|++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|+++++++.
T Consensus 3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~lGa~~vi~~~ 81 (182)
T d1vj0a2 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGADLTLNRR 81 (182)
T ss_dssp HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTCSEEEETT
T ss_pred HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccc-cccccccceEEEecc
Confidence 456788899999999999998889999999999999999999999999998 788888887776 566999999999876
Q ss_pred CHH------HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChH-HHhhCCcEEEecccCC
Q 018094 237 DQD------EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAF-SLLMGRKIVGGSMIGG 305 (361)
Q Consensus 237 ~~~------~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~-~~~~~~~~i~g~~~~~ 305 (361)
+.+ .+.+.++ |+|+||||+|++.+++.++++++++|+++.+|...+ ...++.. .++.|++++.|++.++
T Consensus 82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~ 161 (182)
T d1vj0a2 82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD 161 (182)
T ss_dssp TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence 532 2444443 799999999998878999999999999999997543 3455544 3678999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 018094 306 MKETQEMIDFAAKH 319 (361)
Q Consensus 306 ~~~~~~~~~~l~~~ 319 (361)
..++++++++++++
T Consensus 162 ~~~~~~~~~~i~~~ 175 (182)
T d1vj0a2 162 TSHFVKTVSITSRN 175 (182)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHC
Confidence 99999999999876
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=3.9e-25 Score=175.72 Aligned_cols=135 Identities=18% Similarity=0.231 Sum_probs=114.0
Q ss_pred cccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCC-CCCCcccccccEEEEEeCCCCCCCC
Q 018094 11 KNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGSKVSKFK 89 (361)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~lG~e~~G~V~~vG~~~~~~~ 89 (361)
|+++++...+++..+++.+++.|+|+++||+|||.++|||++|++...|.++.. .+|.++|+|++|+|+++|. ..++
T Consensus 1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~ 78 (146)
T d1o89a1 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH 78 (146)
T ss_dssp CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence 788888777777778999999999999999999999999999999999976543 6789999999999999766 4799
Q ss_pred CCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchhhh
Q 018094 90 VGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCAGI 169 (361)
Q Consensus 90 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~~~ 169 (361)
+||+|++.... .+....|+|+||+.+|+++++++|+++++++||++++++.
T Consensus 79 ~g~~v~~~~~~-----------------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~ 129 (146)
T d1o89a1 79 AGQEVLLTGWG-----------------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNF 129 (146)
T ss_dssp TTCEEEEECTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHH
T ss_pred ceeeEEeeccc-----------------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHH
Confidence 99999753211 1345679999999999999999999999999999999988
Q ss_pred hhhHHHH
Q 018094 170 TVYSPLR 176 (361)
Q Consensus 170 ~a~~~l~ 176 (361)
||+.++.
T Consensus 130 tA~~~~~ 136 (146)
T d1o89a1 130 AEAIINN 136 (146)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 8865543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=1.4e-24 Score=178.19 Aligned_cols=163 Identities=21% Similarity=0.189 Sum_probs=138.0
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEec
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
+|+++||.. .++.+||+++++. .+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++ ++++++|++++++
T Consensus 1 vS~e~Aal~-epla~a~~a~~~~-~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl-~~a~~~Ga~~~~~ 77 (171)
T d1pl8a2 1 VTFEEGALI-EPLSVGIHACRRG-GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAKEIGADLVLQ 77 (171)
T ss_dssp SCHHHHHHH-HHHHHHHHHHHHH-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCSEEEE
T ss_pred CCHHHHHHH-HHHHHHHHHHHHh-CCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHH-HHHHHhCCccccc
Confidence 467887744 5778899999865 58999999999999999999999999999 788888887765 5669999999888
Q ss_pred CCCHH---HHHHhc----CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCHH
Q 018094 235 SRDQD---EMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGMK 307 (361)
Q Consensus 235 ~~~~~---~~~~~~----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 307 (361)
..+++ ..+.++ .++|++|||+|++.+++.++++++++|+++.+|.+....+++...++.|++++.|++.+ .+
T Consensus 78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~-~~ 156 (171)
T d1pl8a2 78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRY-CN 156 (171)
T ss_dssp CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSC-SS
T ss_pred ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCC-Hh
Confidence 75532 222222 37999999999998899999999999999999998877889999999999999999765 45
Q ss_pred HHHHHHHHHHcCCCc
Q 018094 308 ETQEMIDFAAKHNIR 322 (361)
Q Consensus 308 ~~~~~~~~l~~~~l~ 322 (361)
+|+++++++++|+++
T Consensus 157 ~~~~al~li~~gkid 171 (171)
T d1pl8a2 157 TWPVAISMLASKSVN 171 (171)
T ss_dssp CHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHcCCCC
Confidence 799999999999874
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.92 E-value=4.1e-24 Score=175.32 Aligned_cols=161 Identities=22% Similarity=0.222 Sum_probs=134.6
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
+|+++||.+ .++.+||+++++.. +++|++|+|+|+|++|++++|+||.+|++|++++++++++ ++++++|++..+..
T Consensus 1 VS~e~Aal~-ePla~a~~a~~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGALL-EPLSVGVHACRRAG-VQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCGADVTLVV 77 (170)
T ss_dssp SCHHHHHTH-HHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTCSEEEEC
T ss_pred CCHHHHHHH-HHHHHHHHHHHHhC-CCCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHH-HHHHHcCCcEEEec
Confidence 467888754 56778999997654 8999999999999999999999999999999999988876 55689999876643
Q ss_pred CC----H-HHHHHh---c-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChHHHhhCCcEEEecccCCH
Q 018094 236 RD----Q-DEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAFSLLMGRKIVGGSMIGGM 306 (361)
Q Consensus 236 ~~----~-~~~~~~---~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 306 (361)
+. . +...++ . .++|+||||+|++.+++.++++++++|+++.+|.+.....++...++.|++++.|++.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~- 156 (170)
T d1e3ja2 78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYC- 156 (170)
T ss_dssp CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCS-
T ss_pred cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCH-
Confidence 32 1 222222 2 379999999999888999999999999999999888778899999999999999997654
Q ss_pred HHHHHHHHHHHcCC
Q 018094 307 KETQEMIDFAAKHN 320 (361)
Q Consensus 307 ~~~~~~~~~l~~~~ 320 (361)
++|+++++++++|+
T Consensus 157 ~~~~~ai~li~~Gk 170 (170)
T d1e3ja2 157 NDYPIALEMVASGR 170 (170)
T ss_dssp SCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCC
Confidence 57999999999985
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.92 E-value=3.5e-24 Score=175.95 Aligned_cols=161 Identities=24% Similarity=0.325 Sum_probs=130.3
Q ss_pred cccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 158 LDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 158 ~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
+.+||++.|++.|+|+++.+.+++++|++|||+|+|++|++++|++|++|+ +|++++++++| .++++++|+++++|++
T Consensus 2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~k-l~~a~~lGa~~~i~~~ 80 (174)
T d1p0fa2 2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK-FPKAIELGATECLNPK 80 (174)
T ss_dssp CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGG-HHHHHHTTCSEEECGG
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHH-HHHHHHcCCcEEEcCC
Confidence 567999999999999999888889999999999999999999999999998 56666666555 4677999999999865
Q ss_pred CHH----HHHH-hc-CCccEEEEcCCCcccHHHHHHhhcc-CCEEEEecCCCCCc--ccChHHHhhCCcEEEecccCC--
Q 018094 237 DQD----EMQA-AM-GTMDGIIDTVSAVHPLMPLIGLLKS-QGKLVLVGAPEKPL--ELPAFSLLMGRKIVGGSMIGG-- 305 (361)
Q Consensus 237 ~~~----~~~~-~~-~g~d~vid~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~-- 305 (361)
+.+ ...+ .+ +++|++||++|+..++..++..+++ +|+++.+|...... +++...+ .++++|.|+..++
T Consensus 81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~-~~~~~i~Gs~~G~~~ 159 (174)
T d1p0fa2 81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL-LTGRSLKGSVFGGFK 159 (174)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHH-HTTCEEEECSGGGCC
T ss_pred CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHH-hCCCEEEEEEeCCCC
Confidence 422 2222 23 3899999999999888889988876 59999999865544 4444443 4688999997543
Q ss_pred HHHHHHHHHHHHcCC
Q 018094 306 MKETQEMIDFAAKHN 320 (361)
Q Consensus 306 ~~~~~~~~~~l~~~~ 320 (361)
.++++++++++.+||
T Consensus 160 ~~d~~~lidl~~~gK 174 (174)
T d1p0fa2 160 GEEVSRLVDDYMKKK 174 (174)
T ss_dssp GGGHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCC
Confidence 578999999999885
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=9.4e-25 Score=179.01 Aligned_cols=146 Identities=27% Similarity=0.380 Sum_probs=121.2
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
+++++||+++++++|||+++++ .++++|++|||+|+ |++|++++|+||.+|++|++++++++++ +.++++|++++++
T Consensus 1 ls~eeAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-~~~~~lGa~~~i~ 78 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-ALPLALGAEEAAT 78 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-HHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccc-ccccccccceeee
Confidence 5789999999999999999986 67899999999997 9999999999999999999999988776 4558999999999
Q ss_pred CCCHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEecccCC
Q 018094 235 SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMIGG 305 (361)
Q Consensus 235 ~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~ 305 (361)
+.+.........|+|+|||++|. .+..++++++++|+++.+|..++ ..+++...++.|++++.|++..+
T Consensus 79 ~~~~~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~~ 148 (171)
T d1iz0a2 79 YAEVPERAKAWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTP 148 (171)
T ss_dssp GGGHHHHHHHTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHH
T ss_pred hhhhhhhhhccccccccccccch--hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCcC
Confidence 87644333334589999999884 48999999999999999998654 45788888899999999987543
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=1.4e-26 Score=188.16 Aligned_cols=152 Identities=18% Similarity=0.094 Sum_probs=128.5
Q ss_pred cccccceecccCCCCCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCC-CCCCcccccccEEEEEeCCCCCC
Q 018094 9 HPKNAFGWAARDTSGVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNA-IYPIVPGHEIVGVVTEVGSKVSK 87 (361)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~lG~e~~G~V~~vG~~~~~ 87 (361)
++|+++.+...+.+..|++++++.|++++|||||||+++|||++|++.+.|.++.. .+|.++|+|++|+|++ +.+.+
T Consensus 2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~ 79 (162)
T d1tt7a1 2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR 79 (162)
T ss_dssp CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence 47888888887788889999999999999999999999999999999998876643 6678999999999998 56778
Q ss_pred CCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcccccccchh
Q 018094 88 FKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLDATAPLLCA 167 (361)
Q Consensus 88 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~~aa~l~~~ 167 (361)
+++||+|+..... .+....|+|+||+.+|+++++++|+++++++||.+++.
T Consensus 80 ~~~g~~v~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~ 130 (162)
T d1tt7a1 80 FAEGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLL 130 (162)
T ss_dssp CCTTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCST
T ss_pred cccceeeEeeecc-----------------------------ceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHH
Confidence 9999999753321 13456899999999999999999999999999999999
Q ss_pred hhhhhHHHHhhCCCCCCCEEEEEcc
Q 018094 168 GITVYSPLRFYGLDKPGMHVGVVGL 192 (361)
Q Consensus 168 ~~~a~~~l~~~~~~~~g~~VlI~Ga 192 (361)
..|||.++... ..+.+++|||.|+
T Consensus 131 ~~ta~~~~~~~-~~~~~~~Vli~ga 154 (162)
T d1tt7a1 131 TIVDREVSLEE-TPGALKDILQNRI 154 (162)
T ss_dssp TSEEEEECSTT-HHHHHHHTTTTCC
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECC
Confidence 99999876542 2345577888776
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.91 E-value=3.8e-24 Score=175.60 Aligned_cols=163 Identities=18% Similarity=0.260 Sum_probs=133.0
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEec
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
+++|+|+.+++++.|+|++++. +.+++|++|+|+|+|++|++++|+||.+|+ +|++++.+++| .++++++|++++++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~~~-a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r-~~~a~~lGa~~~i~ 78 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGAEL-ADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPIC-VEAAKFYGATDILN 78 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHHHH-TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHH-HHHHHHHTCSEEEC
T ss_pred CCHHHHHHhhhHHHHHHHHHHH-hCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhh-HHHHHhhCcccccc
Confidence 5789999999999999999876 678999999999999999999999999998 67777777666 56679999999998
Q ss_pred CCCH---HHHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc--ccCh--HHHhhCCcEEEecccCC
Q 018094 235 SRDQ---DEMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--ELPA--FSLLMGRKIVGGSMIGG 305 (361)
Q Consensus 235 ~~~~---~~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~--~~~~~~~~~i~g~~~~~ 305 (361)
++++ +.+.++++ |+|+||||+|+..+++.++++++++|+++.+|.+.... .++. .....+++++.++....
T Consensus 79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 158 (174)
T d1jqba2 79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG 158 (174)
T ss_dssp GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecCCC
Confidence 8664 44556664 69999999999888999999999999999999866432 2222 22355788999987665
Q ss_pred HH-HHHHHHHHHHcCC
Q 018094 306 MK-ETQEMIDFAAKHN 320 (361)
Q Consensus 306 ~~-~~~~~~~~l~~~~ 320 (361)
.+ ..+++++++.+|+
T Consensus 159 ~r~~~e~l~~li~~gk 174 (174)
T d1jqba2 159 GRLRAERLRDMVVYNR 174 (174)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred CcccHHHHHHHHHcCC
Confidence 44 4677888888874
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.91 E-value=1.4e-24 Score=180.33 Aligned_cols=164 Identities=20% Similarity=0.266 Sum_probs=134.9
Q ss_pred ccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 159 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
+|||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|++|+++++++++. +.++++|+++++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~~~Ga~~vi~~~~ 79 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSRLGVEYVGDSRS 79 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHTTCCSEEEETTC
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccc-cccccccccccccCCc
Confidence 5799999999999999999999999999999987 9999999999999999999999988775 5668999999999877
Q ss_pred HH---HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEecccCC------
Q 018094 238 QD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGG------ 305 (361)
Q Consensus 238 ~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~------ 305 (361)
++ .+++.++ |+|++||++|++. ++.++++++++|+++.+|..+... .......+.+++++.++....
T Consensus 80 ~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (183)
T d1pqwa_ 80 VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQP 158 (183)
T ss_dssp STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCH
T ss_pred cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCH
Confidence 54 4555554 7999999999865 999999999999999998755322 222223346888888875422
Q ss_pred ---HHHHHHHHHHHHcCCCcee
Q 018094 306 ---MKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 306 ---~~~~~~~~~~l~~~~l~~~ 324 (361)
.+.++++++++++|+++|.
T Consensus 159 ~~~~~~~~~v~~~i~~G~i~p~ 180 (183)
T d1pqwa_ 159 ARYRQLLQHILQHVADGKLEVL 180 (183)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCC
T ss_pred HHHHHHHHHHHHHHHCCCCcee
Confidence 2457888899999999873
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.91 E-value=1.4e-23 Score=173.10 Aligned_cols=164 Identities=18% Similarity=0.196 Sum_probs=128.5
Q ss_pred CcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCC
Q 018094 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSR 236 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~ 236 (361)
++++||+++|++.|+|+++.+.+++++||+|||+|+|++|++++|+++.+|+++++++++++++.+++++||+++++++.
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~ 81 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence 46889999999999999998888899999999999999999999999999985444444445556778999999999874
Q ss_pred CH-H----HHHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC--CcccChHHHhhCCcEEEecccCC---
Q 018094 237 DQ-D----EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK--PLELPAFSLLMGRKIVGGSMIGG--- 305 (361)
Q Consensus 237 ~~-~----~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~g~~~~~--- 305 (361)
+. + .+++.+ +++|++||++|+..++..+..+++++|+++.++.... ....+....+.+++++.|+..++
T Consensus 82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~ 161 (176)
T d2fzwa2 82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKS 161 (176)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCcH
Confidence 32 2 233333 3899999999998878889999999988887754332 22333333445789999987654
Q ss_pred HHHHHHHHHHHHcCC
Q 018094 306 MKETQEMIDFAAKHN 320 (361)
Q Consensus 306 ~~~~~~~~~~l~~~~ 320 (361)
.+++.++++++++||
T Consensus 162 ~~d~~~li~l~~~GK 176 (176)
T d2fzwa2 162 VESVPKLVSEYMSKK 176 (176)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCC
Confidence 467888999998885
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.90 E-value=8.7e-24 Score=176.19 Aligned_cols=164 Identities=14% Similarity=0.230 Sum_probs=135.3
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEE-cc-chHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcCCc
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GL-GGLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGAD 230 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~-Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~---~~~~~~~g~~ 230 (361)
+++++||++++.++|||+++.+..++++|++|||+ |+ |++|++++|+||.+|++||+++++.++. .+.++++|++
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad 80 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT 80 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc
Confidence 57899999999999999999999999999999887 55 9999999999999999999999776543 3455789999
Q ss_pred EEecCCCHH------HHHHhc----CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEE
Q 018094 231 SFLVSRDQD------EMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVG 299 (361)
Q Consensus 231 ~v~~~~~~~------~~~~~~----~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~ 299 (361)
++++++..+ .+.+.+ +++|++||++|++. +..++++|+++|+++.+|..++ ..+++...++.|++++.
T Consensus 81 ~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i~ 159 (189)
T d1gu7a2 81 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSA 159 (189)
T ss_dssp EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEEE
T ss_pred EEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEEE
Confidence 999865421 233332 37999999999876 8899999999999999997654 56889999999999999
Q ss_pred ecccCC---------HHHHHHHHHHHHcCC
Q 018094 300 GSMIGG---------MKETQEMIDFAAKHN 320 (361)
Q Consensus 300 g~~~~~---------~~~~~~~~~~l~~~~ 320 (361)
|++... .+.++++++++++|+
T Consensus 160 G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 160 GFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp ECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 986532 245777888888774
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.90 E-value=1.6e-26 Score=190.77 Aligned_cols=156 Identities=18% Similarity=0.209 Sum_probs=128.2
Q ss_pred ccccceecccCCCC---CccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCC----------CCCCCcccccccE
Q 018094 10 PKNAFGWAARDTSG---VLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGN----------AIYPIVPGHEIVG 76 (361)
Q Consensus 10 ~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~----------~~~p~~lG~e~~G 76 (361)
+|+++.+...++|. .++..++|.|+|+++||||||++++||++|++.++|.++. ..+|.++|+|++|
T Consensus 3 t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g 82 (175)
T d1gu7a1 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLF 82 (175)
T ss_dssp EEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEE
T ss_pred eeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccccc
Confidence 78888887777664 2445677888899999999999999999999999886532 2567889999999
Q ss_pred EEEEeCCCCCCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCC
Q 018094 77 VVTEVGSKVSKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGT 156 (361)
Q Consensus 77 ~V~~vG~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~ 156 (361)
+|+++|.++..++.||||.... ...|+|+||+.+|+++++++|+++
T Consensus 83 ~V~~~~~~~~~~~~g~~v~~~~----------------------------------~~~g~~aey~~v~~~~~~~iP~~~ 128 (175)
T d1gu7a1 83 EVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNPA 128 (175)
T ss_dssp EEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCHH
T ss_pred ccccccccccccccccceeccc----------------------------------cccccccceeeehhhhccCCCccc
Confidence 9999999999999999997532 456899999999999999999987
Q ss_pred CcccccccchhhhhhhHHHHh-hCCCCCCCEEEEEc-c-chHHHHHHH
Q 018094 157 PLDATAPLLCAGITVYSPLRF-YGLDKPGMHVGVVG-L-GGLGHVAVK 201 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~-~~~~~~g~~VlI~G-a-g~vG~~a~~ 201 (361)
+.+.+ +.+..+|||+++.. ...+++|++|||+| + |++|++++|
T Consensus 129 ~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 129 QSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp HHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred hhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence 54444 34567788888764 46689999999997 4 779988776
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.90 E-value=2.3e-23 Score=172.57 Aligned_cols=156 Identities=22% Similarity=0.247 Sum_probs=128.4
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH-
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD- 239 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~- 239 (361)
+++.++++|||+++++.+++++||+|||+|+ |.+|++++|++|..|++||++++++++. +.++++|+++++++.+++
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-~~~~~~Ga~~vi~~~~~~~ 86 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLKQIGFDAAFNYKTVNS 86 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCSEEEETTSCSC
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-HHHHhhhhhhhcccccccH
Confidence 4778899999999999999999999999997 9999999999999999999999988775 556899999999887654
Q ss_pred --HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-------CcccChHHHhhCCcEEEecccCC--H
Q 018094 240 --EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-------PLELPAFSLLMGRKIVGGSMIGG--M 306 (361)
Q Consensus 240 --~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~g~~~~~--~ 306 (361)
.+.+.++ |+|+|||++|++. +..++++++++|+++.+|..+. ...++...++.|++++.|++..+ .
T Consensus 87 ~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~~ 165 (182)
T d1v3va2 87 LEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQG 165 (182)
T ss_dssp HHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCCH
T ss_pred HHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccCh
Confidence 3334433 7999999999765 9999999999999999996321 23566677899999999986543 2
Q ss_pred ----HHHHHHHHHHHcC
Q 018094 307 ----KETQEMIDFAAKH 319 (361)
Q Consensus 307 ----~~~~~~~~~l~~~ 319 (361)
+.++++++++++|
T Consensus 166 ~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 166 DVREKALRDLMKWVLEG 182 (182)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 3456677777665
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.89 E-value=1.4e-22 Score=166.78 Aligned_cols=163 Identities=24% Similarity=0.312 Sum_probs=131.3
Q ss_pred CcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
++++||+++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..|+ +|++++++++|+ ++++++|+++++++
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl-~~a~~~GAd~~in~ 80 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGATDFVNP 80 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCCEEECG
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHH-HHHHHcCCcEEEcC
Confidence 4688999999999999999888889999999999999999999999999988 666666666654 66799999999987
Q ss_pred CCH----HHHHHhc--CCccEEEEcCCCcccHHHHHHhhccCCEE-EEecCCCCCcccChHHHhhCCcEEEecccCC---
Q 018094 236 RDQ----DEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKL-VLVGAPEKPLELPAFSLLMGRKIVGGSMIGG--- 305 (361)
Q Consensus 236 ~~~----~~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~-v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~--- 305 (361)
.++ +...+.+ +|+|++||++|+..++..++.+++++|.+ +..|..+....++...++.+++++.|+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~ 160 (175)
T d1cdoa2 81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG 160 (175)
T ss_dssp GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCcH
Confidence 543 2333333 38999999999988788889888777555 4555555555566666677899999997654
Q ss_pred HHHHHHHHHHHHcCC
Q 018094 306 MKETQEMIDFAAKHN 320 (361)
Q Consensus 306 ~~~~~~~~~~l~~~~ 320 (361)
.++++++++++++||
T Consensus 161 ~~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 161 KDGVPKMVKAYLDKK 175 (175)
T ss_dssp HHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHcCC
Confidence 578999999999885
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=7.8e-23 Score=169.02 Aligned_cols=162 Identities=22% Similarity=0.271 Sum_probs=128.8
Q ss_pred CCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec
Q 018094 156 TPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV 234 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~ 234 (361)
+|+++||+++++++|||++|++..++++|++|||+|+ |.+|++++|+||..|++|++++++++++ +.++++|+++++|
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-~~~~~lGa~~vi~ 79 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALKAGAWQVIN 79 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH-HHHHhcCCeEEEE
Confidence 5799999999999999999999989999999999986 8899999999999999999999998886 4558999999999
Q ss_pred CCCHH---HHHHhcC--CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-cccChHHHhh-CCcEEEecc----c
Q 018094 235 SRDQD---EMQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFSLLM-GRKIVGGSM----I 303 (361)
Q Consensus 235 ~~~~~---~~~~~~~--g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~-~~~~i~g~~----~ 303 (361)
+++++ .++++++ ++|++||++|++. +..++.+++++|+++.+|..... ..++...+.. +.+.+.... .
T Consensus 80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 158 (179)
T d1qora2 80 YREEDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYI 158 (179)
T ss_dssp TTTSCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHC
T ss_pred CCCCCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcCCeeeecccccCCccccchhhhhccceEEEEeeEEeeec
Confidence 87754 4556665 6999999999765 99999999999999999876543 4455544433 344443321 1
Q ss_pred CCHH----HHHHHHHHHHcC
Q 018094 304 GGMK----ETQEMIDFAAKH 319 (361)
Q Consensus 304 ~~~~----~~~~~~~~l~~~ 319 (361)
...+ .++++++++++|
T Consensus 159 ~~~~~~~~~~~~l~~lv~~G 178 (179)
T d1qora2 159 TTREELTEASNELFSLIASG 178 (179)
T ss_dssp CSHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCc
Confidence 2333 345567777776
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.89 E-value=3.3e-22 Score=164.72 Aligned_cols=163 Identities=17% Similarity=0.264 Sum_probs=128.3
Q ss_pred CcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
++++||+++|++.|+|+++.+.+++++||+|||+|+|++|++++++++.+|+ +|++++++++|+ ++++++|+++++++
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~-~~a~~~Ga~~~i~~ 80 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAKEVGATECVNP 80 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSEEECG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHH-HHHHHhCCeeEEec
Confidence 4688999999999999999988999999999999999999999999999997 777777766664 66799999998876
Q ss_pred CC-H---HHHHHh-c-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecC-CCCCc-ccChHHHhhCCcEEEecccCC--
Q 018094 236 RD-Q---DEMQAA-M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGA-PEKPL-ELPAFSLLMGRKIVGGSMIGG-- 305 (361)
Q Consensus 236 ~~-~---~~~~~~-~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~-~~~~~-~~~~~~~~~~~~~i~g~~~~~-- 305 (361)
.+ + +...+. . +|+|++||++|...+.+.++..++++|..+.++. ..... ......++.+++++.|+..++
T Consensus 81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~ 160 (176)
T d2jhfa2 81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK 160 (176)
T ss_dssp GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence 43 2 222222 2 3899999999999888889999999865555544 33332 222234566999999997655
Q ss_pred -HHHHHHHHHHHHcCC
Q 018094 306 -MKETQEMIDFAAKHN 320 (361)
Q Consensus 306 -~~~~~~~~~~l~~~~ 320 (361)
.++++++++++.+||
T Consensus 161 ~~~~~~~li~~~~~GK 176 (176)
T d2jhfa2 161 SKDSVPKLVADFMAKK 176 (176)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHCcC
Confidence 578899999998875
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=2.2e-22 Score=167.23 Aligned_cols=162 Identities=15% Similarity=0.111 Sum_probs=124.1
Q ss_pred CcccccccchhhhhhhHHHHhhCCCCCC--CEEEEEcc-chHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCcEE
Q 018094 157 PLDATAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAIERLGADSF 232 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~a~~la~~~g~~-Vi~~~~~~~~~~~~~~~~g~~~v 232 (361)
|+... +++++++|||++++..+++++| ++|||+|+ |++|++++|+||.+|++ |+.+++++++..++++++|++++
T Consensus 3 ~~~~g-alg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v 81 (187)
T d1vj1a2 3 SYFLG-AIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA 81 (187)
T ss_dssp GGGGT-TTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred cHHHH-HhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence 44443 4678899999999999999987 88999996 99999999999999995 55567788888888889999999
Q ss_pred ecCCCHH---HHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC-------ccc---ChHHHhhCCcEE
Q 018094 233 LVSRDQD---EMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP-------LEL---PAFSLLMGRKIV 298 (361)
Q Consensus 233 ~~~~~~~---~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-------~~~---~~~~~~~~~~~i 298 (361)
+|+.+++ .+++.++ |+|+|||++|++. ++..+++++++|+++.+|..++. ..+ ....+..|++++
T Consensus 82 i~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~ 160 (187)
T d1vj1a2 82 VNYKTGNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR 160 (187)
T ss_dssp EETTSSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred eeccchhHHHHHHHHhccCceEEEecCCchh-HHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence 9997754 4445444 8999999999875 99999999999999999974321 111 123356799999
Q ss_pred EecccCC-----HHHHHHHHHHHHcCC
Q 018094 299 GGSMIGG-----MKETQEMIDFAAKHN 320 (361)
Q Consensus 299 ~g~~~~~-----~~~~~~~~~~l~~~~ 320 (361)
.|+...+ .+.++++.+++.+|+
T Consensus 161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 161 ERFTVLNYKDKFEPGILQLSQWFKEGK 187 (187)
T ss_dssp EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence 9875432 244677778888775
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.87 E-value=1e-21 Score=161.24 Aligned_cols=159 Identities=21% Similarity=0.331 Sum_probs=128.7
Q ss_pred CcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecC
Q 018094 157 PLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVS 235 (361)
Q Consensus 157 ~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~ 235 (361)
++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++.+|+ +|++++.+++|+ ++++++|+++++++
T Consensus 3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-~~Ak~~GA~~~in~ 81 (176)
T d1d1ta2 3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKF-EKAMAVGATECISP 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHHTCSEEECG
T ss_pred CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHH-HHHHhcCCcEEECc
Confidence 4789999999999999999888889999999999999999999999999997 788888888776 67799999999986
Q ss_pred CCHH----HHHHhc--CCccEEEEcCCCcccHHHHHHhhccC-CEEEEecCCCCCc--ccChHHHhhCCcEEEecccCC-
Q 018094 236 RDQD----EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLVGAPEKPL--ELPAFSLLMGRKIVGGSMIGG- 305 (361)
Q Consensus 236 ~~~~----~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~g~~~~~- 305 (361)
.+.+ .+.+.+ .|+|++||++|+..++..++..+.++ |+++.+|.+.... .++...++ ++.++.|+..++
T Consensus 82 ~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~-~~~~i~Gs~~G~~ 160 (176)
T d1d1ta2 82 KDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLF-TGRTWKGCVFGGL 160 (176)
T ss_dssp GGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHH-TTCEEEECSGGGC
T ss_pred cccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHh-CCCEEEEEEEeCC
Confidence 5432 233333 38999999999998788888878665 9999999876543 44444444 678999998654
Q ss_pred --HHHHHHHHHHHH
Q 018094 306 --MKETQEMIDFAA 317 (361)
Q Consensus 306 --~~~~~~~~~~l~ 317 (361)
.+++.++++++.
T Consensus 161 ~~~~dip~li~~~~ 174 (176)
T d1d1ta2 161 KSRDDVPKLVTEFL 174 (176)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHh
Confidence 467777776643
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.3e-22 Score=166.15 Aligned_cols=156 Identities=19% Similarity=0.223 Sum_probs=127.9
Q ss_pred CCcccccccchhhhhhhHHHH---hhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE
Q 018094 156 TPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS 231 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~ 231 (361)
+++.+||+++++++|||++++ ..+..+++++|||+|+ |++|.+++|+||.+|++||++++++++.+ .++++|+++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~-~~~~lGad~ 79 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE-YLKSLGASR 79 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH-HHHHHTEEE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHH-HHHhhcccc
Confidence 578899999999999997754 4454456679999987 99999999999999999999999988864 458999999
Q ss_pred EecCCCHHHHHHhcC-CccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEeccc--CCHH
Q 018094 232 FLVSRDQDEMQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGMK 307 (361)
Q Consensus 232 v~~~~~~~~~~~~~~-g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~~ 307 (361)
++++++++..+.+.. ..|.++|++|+.. +...+++++++|+++.+|..++ ...++...++.|++++.|+.. .+++
T Consensus 80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~ 158 (177)
T d1o89a2 80 VLPRDEFAESRPLEKQVWAGAIDTVGDKV-LAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPE 158 (177)
T ss_dssp EEEGGGSSSCCSSCCCCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEECCSSSCCHH
T ss_pred ccccccHHHHHHHHhhcCCeeEEEcchHH-HHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEEecccCCHH
Confidence 999876555444443 5899999999876 9999999999999999998765 467888888999999999754 4445
Q ss_pred HHHHHH
Q 018094 308 ETQEMI 313 (361)
Q Consensus 308 ~~~~~~ 313 (361)
...+++
T Consensus 159 ~~~~~~ 164 (177)
T d1o89a2 159 RRAQAW 164 (177)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444444
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.84 E-value=2.8e-20 Score=154.94 Aligned_cols=160 Identities=20% Similarity=0.139 Sum_probs=126.9
Q ss_pred ccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCC
Q 018094 159 DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRD 237 (361)
Q Consensus 159 ~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~ 237 (361)
++.++|...+.|||++++. +++++|++|||+|+|++|++++++|+.+|+ +|++++.+++|+ ++++++|+++++++.+
T Consensus 2 ~d~~~l~d~~~ta~~a~~~-a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-~~a~~~Ga~~~~~~~~ 79 (195)
T d1kola2 2 RDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQGFEIADLSLD 79 (195)
T ss_dssp HHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCEEEETTSS
T ss_pred chHHhcccHHHHHHHHHHH-hCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhh-HhhhhccccEEEeCCC
Confidence 4567888899999999975 679999999999999999999999999999 677777776654 6779999999998766
Q ss_pred HH---HHHHhcC--CccEEEEcCCCc---------------ccHHHHHHhhccCCEEEEecCCCC-------------Cc
Q 018094 238 QD---EMQAAMG--TMDGIIDTVSAV---------------HPLMPLIGLLKSQGKLVLVGAPEK-------------PL 284 (361)
Q Consensus 238 ~~---~~~~~~~--g~d~vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~~~-------------~~ 284 (361)
.+ .+.++++ ++|++||++|.+ .+++.++++++++|+++.+|.+.+ .+
T Consensus 80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~ 159 (195)
T d1kola2 80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL 159 (195)
T ss_dssp SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence 43 4555654 799999999943 468999999999999999997542 12
Q ss_pred ccChHHHhhCCcEEEecccCCHHHHHHHHHHHHcCC
Q 018094 285 ELPAFSLLMGRKIVGGSMIGGMKETQEMIDFAAKHN 320 (361)
Q Consensus 285 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~~ 320 (361)
.++...++.|++++.+......+.++++++++.+++
T Consensus 160 ~~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k 195 (195)
T d1kola2 160 SIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR 195 (195)
T ss_dssp CCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred eeeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence 355556677899987644434455788888887764
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.83 E-value=7.1e-21 Score=154.27 Aligned_cols=155 Identities=19% Similarity=0.286 Sum_probs=120.1
Q ss_pred hhhhhhh---HHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH--
Q 018094 166 CAGITVY---SPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD-- 239 (361)
Q Consensus 166 ~~~~~a~---~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~-- 239 (361)
++++||| ++|.+.+..+++++|||+|+ |++|++++|+||.+|++|+.+++++++.+. ++++|+++++++++..
T Consensus 3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-~~~lGad~vi~~~~~~~~ 81 (167)
T d1tt7a2 3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADY-LKQLGASEVISREDVYDG 81 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHH-HHHHTCSEEEEHHHHCSS
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHH-HHhhcccceEeccchhch
Confidence 3456666 45666666677889999997 999999999999999999999999888654 5899999998865321
Q ss_pred HHHHhc-CCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCC-CcccChHHHhhCCcEEEeccc--CCHHHHHHHHHH
Q 018094 240 EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK-PLELPAFSLLMGRKIVGGSMI--GGMKETQEMIDF 315 (361)
Q Consensus 240 ~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~--~~~~~~~~~~~~ 315 (361)
.+.+.. +++|+|||++|+.. +..++++|+++|+++.+|...+ ..+++...++.|++++.|+.. ...+....+.+.
T Consensus 82 ~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~ 160 (167)
T d1tt7a2 82 TLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWER 160 (167)
T ss_dssp CCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHH
T ss_pred hhhcccCCCceEEEecCcHHH-HHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHHHH
Confidence 111111 37999999999986 9999999999999999998765 468899999999999999643 334555556555
Q ss_pred HHcCCCce
Q 018094 316 AAKHNIRA 323 (361)
Q Consensus 316 l~~~~l~~ 323 (361)
++ +.++|
T Consensus 161 l~-~~L~P 167 (167)
T d1tt7a2 161 MS-SDLKP 167 (167)
T ss_dssp TT-TTSCC
T ss_pred HH-hcCCC
Confidence 53 34543
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.60 E-value=4.1e-15 Score=116.74 Aligned_cols=134 Identities=13% Similarity=0.030 Sum_probs=97.4
Q ss_pred ccccceeccc--CCC--CCccceeeeccCCCCCeEEEEEeeeccccchhhhhhCCCCCCCCCCcccccccEEEEEeCCCC
Q 018094 10 PKNAFGWAAR--DTS--GVLSPFHFSRRATGEKDVTFKVTHCGICHSDLHLIKNEWGNAIYPIVPGHEIVGVVTEVGSKV 85 (361)
Q Consensus 10 ~~~~~~~~~~--~~~--~~l~~~~~~~p~~~~~~vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~lG~e~~G~V~~vG~~~ 85 (361)
..+.+.+..+ +.| +++++++.++|+|++||||||+++.++++....... .....-++..+++|+|++ |+.
T Consensus 3 ~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~----~~~~g~~~~g~~vg~Vv~--S~~ 76 (147)
T d1v3va1 3 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK----RLKEGAVMMGQQVARVVE--SKN 76 (147)
T ss_dssp EEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG----GSCTTSBCCCCEEEEEEE--ESC
T ss_pred ccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEccccccccc----ccccCCccccceEEEEEE--eCC
Confidence 3445555444 222 358889999999999999999999999875432221 123334566688999988 788
Q ss_pred CCCCCCCEEEEccccCCCCCCcccccCCCCCCcccccccccccCCCcccCCccceEEEeccCceEECCCCCCcc-----c
Q 018094 86 SKFKVGDKVGVGCMVGSCRSCDSCAIDLENYCPKVIMTYANKYHDGTITYGGYSDIMVADEHFVVRIPEGTPLD-----A 160 (361)
Q Consensus 86 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~v~~iP~~~~~~-----~ 160 (361)
++|++||+|. ..++|+||.++++..+.++|++++.. .
T Consensus 77 ~~f~~GD~V~--------------------------------------g~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~ 118 (147)
T d1v3va1 77 SAFPAGSIVL--------------------------------------AQSGWTTHFISDGKGLEKLLTEWPDKKIQYHE 118 (147)
T ss_dssp TTSCTTCEEE--------------------------------------ECCCSBSEEEECSSSCEECCTTCCTTSSCCCE
T ss_pred CcccCCCEEE--------------------------------------EccCCEeEEEeccceeeEccccccccccchhh
Confidence 8999999996 34679999999999999999775433 3
Q ss_pred ccccchhhhh-hhHHHHhhCCCCCCCEEEE
Q 018094 161 TAPLLCAGIT-VYSPLRFYGLDKPGMHVGV 189 (361)
Q Consensus 161 aa~l~~~~~~-a~~~l~~~~~~~~g~~VlI 189 (361)
.+++....+| ||..+... -+.|++||+
T Consensus 119 ~~~lG~~Gmtaay~gl~~~--~k~Getvv~ 146 (147)
T d1v3va1 119 HVTKGFENMPAAFIEMLNG--ANLGKAVVT 146 (147)
T ss_dssp EEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred hHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence 4466667776 55566544 367999986
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.39 E-value=1.7e-13 Score=94.12 Aligned_cols=73 Identities=26% Similarity=0.323 Sum_probs=63.3
Q ss_pred CCcccccccchhhhhhhHHHH---hhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC
Q 018094 156 TPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA 229 (361)
Q Consensus 156 ~~~~~aa~l~~~~~~a~~~l~---~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~ 229 (361)
+++++|+.++++++|||.+++ .....+++++|||+|+ |.+|.+++|++|.+|++|+++++++++. ++++++|+
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~-~~~~~lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-EYLKSLGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHHTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH-HHHHHCCC
Confidence 578999999999999998764 4455689999999987 9999999999999999999999998876 55588874
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.45 E-value=8e-07 Score=69.33 Aligned_cols=100 Identities=20% Similarity=0.237 Sum_probs=78.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc----
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV---- 258 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~---- 258 (361)
+..+|+|+|+|.+|+.|++.|+.+|++|.+.+.+.++.+++-..++........+.+.+.+....+|+||-++--+
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~a 110 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 110 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCccc
Confidence 4577999999999999999999999999999999998887755555433333455566666667899999986542
Q ss_pred --ccHHHHHHhhccCCEEEEecCCCC
Q 018094 259 --HPLMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 259 --~~~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
...+..++.|+++.-+|++....+
T Consensus 111 P~lIt~~mv~~Mk~GSVIVDvaidqG 136 (168)
T d1pjca1 111 PILVPASLVEQMRTGSVIVDVAVDQG 136 (168)
T ss_dssp CCCBCHHHHTTSCTTCEEEETTCTTC
T ss_pred CeeecHHHHhhcCCCcEEEEeecCCC
Confidence 135789999999999999976443
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=98.25 E-value=4.1e-06 Score=66.18 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=80.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec-CC----------------------CHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV-SR----------------------DQD 239 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~-~~----------------------~~~ 239 (361)
+..+|+|+|+|.+|+.|+..|+.+|++|.+.+.+.++++++ ++++...+.. .. ..+
T Consensus 28 ~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l-~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 28 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHH-HHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 45679999999999999999999999999999999988776 6777644311 00 012
Q ss_pred HHHHhcCCccEEEEcCCCc------ccHHHHHHhhccCCEEEEecCCCC-CcccCh--HHHhhCCcEEEec
Q 018094 240 EMQAAMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLVGAPEK-PLELPA--FSLLMGRKIVGGS 301 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~--~~~~~~~~~i~g~ 301 (361)
.+.+.....|+||-++--+ ..-+..++.|++|+-+|++....+ .++.+. ..+..+++.+.+.
T Consensus 107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~Ets~~~~~~~~~gV~~~gv 177 (183)
T d1l7da1 107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGH 177 (183)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECC
T ss_pred HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCccccCcCCCEEEECCEEEEee
Confidence 2333345799999875432 135689999999999999976443 232221 1234455665554
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.16 E-value=1.1e-05 Score=65.23 Aligned_cols=82 Identities=13% Similarity=0.116 Sum_probs=65.8
Q ss_pred HhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC----C-cEEecCCCHHHHHHhcCCcc
Q 018094 176 RFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG----A-DSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g----~-~~v~~~~~~~~~~~~~~g~d 249 (361)
+....--+|+++||+|+ |++|..+++.+...|++|++++++.++..++.+++. . ....|..+.+.+.+..+++|
T Consensus 15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iD 94 (191)
T d1luaa1 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAH 94 (191)
T ss_dssp HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcC
Confidence 33333358999999997 999999999999999999999999988777666543 2 23456677778888888999
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
++|+++|.
T Consensus 95 ilin~Ag~ 102 (191)
T d1luaa1 95 FVFTAGAI 102 (191)
T ss_dssp EEEECCCT
T ss_pred eeeecCcc
Confidence 99999874
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.01 E-value=1.5e-05 Score=67.05 Aligned_cols=97 Identities=22% Similarity=0.368 Sum_probs=73.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++.+++.++++... ..|-.+++.+.++ .++.|++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 5889999997 999999999999999999999999998888888887532 3455555433322 3579999
Q ss_pred EEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecC
Q 018094 252 IDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGA 279 (361)
Q Consensus 252 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~ 279 (361)
++++|... ..+.++..| +.+|+++.++.
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS 137 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS 137 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence 99987643 234455565 44699999986
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.97 E-value=3.5e-05 Score=65.07 Aligned_cols=99 Identities=18% Similarity=0.264 Sum_probs=74.6
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe---cCCCHHHHHH-------hcCCccE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL---VSRDQDEMQA-------AMGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~---~~~~~~~~~~-------~~~g~d~ 250 (361)
-+|+++||.|+ +++|.+.++.+...|++|++++++.++..++.++++...+. |..+++.+.+ ..+++|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 36889999997 99999999999999999999999999888888888875543 3344433222 2358999
Q ss_pred EEEcCCCcc-------------------------cHHHHHHhhc-cCCEEEEecCC
Q 018094 251 IIDTVSAVH-------------------------PLMPLIGLLK-SQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~-------------------------~~~~~~~~l~-~~G~~v~~g~~ 280 (361)
+++++|... ..+.++..|+ .+|+++.++..
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~ 139 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV 139 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence 999998642 2234555564 57999999864
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.92 E-value=3.2e-05 Score=65.32 Aligned_cols=98 Identities=21% Similarity=0.362 Sum_probs=73.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++..+..++++... ..|-.+++.++++ .+++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 6899999997 999999999999999999999999999888888887543 2345555444332 2579999
Q ss_pred EEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 252 IDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 252 id~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
++++|... ..+.++..+ +.+|+++.++..
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~ 139 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSA 139 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccc
Confidence 99988643 223344443 446999999864
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.89 E-value=5.5e-05 Score=63.37 Aligned_cols=100 Identities=17% Similarity=0.232 Sum_probs=74.2
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~ 250 (361)
-+|+++||.|+ +++|.+.++.+...|++|+++++++++..++.++++.... .|-.+++.++++ .+++|+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi 83 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence 46899999997 9999999999999999999999999998888888875432 345555443332 257999
Q ss_pred EEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCCC
Q 018094 251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPE 281 (361)
Q Consensus 251 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~ 281 (361)
+++++|... ..+.++..+ +.+|+++.++...
T Consensus 84 linnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~ 141 (244)
T d1nffa_ 84 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 141 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred EEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccc
Confidence 999998743 112344444 3468999997643
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=5.5e-05 Score=63.63 Aligned_cols=98 Identities=18% Similarity=0.262 Sum_probs=72.5
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE--EecCCCHHHHHHh-------cCCccEE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~g~d~v 251 (361)
-+|+++||.|+ +++|.+.++.+...|++|+++++++++..++.++++... ..|-.+++.++++ .+++|++
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 83 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 36899999997 999999999999999999999999988888877776422 2355555544433 2579999
Q ss_pred EEcCCCcc--------------------------cHHHHHHhhc-cCCEEEEecC
Q 018094 252 IDTVSAVH--------------------------PLMPLIGLLK-SQGKLVLVGA 279 (361)
Q Consensus 252 id~~g~~~--------------------------~~~~~~~~l~-~~G~~v~~g~ 279 (361)
++++|... ..+.++..|+ .+|+++.++.
T Consensus 84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS 138 (250)
T d1ydea1 84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS 138 (250)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccc
Confidence 99998431 2233455554 4589999975
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.86 E-value=3.4e-05 Score=60.09 Aligned_cols=74 Identities=24% Similarity=0.308 Sum_probs=59.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
-.+.+|||+|+|.+|.+.+..+...|+ +++++.++.++...+++++|... ++.. .+.+....+|+||.|++.+.
T Consensus 22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-~~~~---~~~~~l~~~Divi~atss~~ 96 (159)
T d1gpja2 22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-VRFD---ELVDHLARSDVVVSATAAPH 96 (159)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CCGG---GHHHHHHTCSEEEECCSSSS
T ss_pred cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-ccch---hHHHHhccCCEEEEecCCCC
Confidence 578899999999999999999999998 78889998888888989998643 3332 23333457999999998764
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=5.7e-05 Score=63.29 Aligned_cols=77 Identities=19% Similarity=0.291 Sum_probs=63.3
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhc---CCccEEEEcC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTV 255 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~---~g~d~vid~~ 255 (361)
-.|+++||.|+ +++|.+.++.+...|++|++++++.++..++.++++.. ...|-.+++.+++.. +++|++++++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA 84 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence 37899999997 99999999999999999999999999888888887642 234666766666554 4799999998
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
|..
T Consensus 85 g~~ 87 (244)
T d1pr9a_ 85 AVA 87 (244)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.82 E-value=0.00013 Score=61.24 Aligned_cols=97 Identities=22% Similarity=0.313 Sum_probs=70.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHH----HHcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI----ERLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++..+.. +++|.+.. .|-.+++.+.++ .++
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999997 99999999999999999999999987765544 34565432 355555443332 357
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGA 279 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~ 279 (361)
+|++++++|... ..+.++..| +.+|+++.++.
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S 142 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 142 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence 999999998642 223456666 34689999975
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.76 E-value=7.6e-05 Score=62.45 Aligned_cols=76 Identities=24% Similarity=0.315 Sum_probs=61.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhc---CCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAM---GTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~---~g~d~vid~~g 256 (361)
.|+++||.|+ +++|.+.++.+...|++|++++++.++..++.++++.- ...|-.+++.+++.. +++|++++++|
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg 83 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence 6899999997 99999999999999999999999998888887887642 234566666666554 47999999988
Q ss_pred Cc
Q 018094 257 AV 258 (361)
Q Consensus 257 ~~ 258 (361)
..
T Consensus 84 ~~ 85 (242)
T d1cyda_ 84 LV 85 (242)
T ss_dssp CC
T ss_pred cc
Confidence 64
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.76 E-value=0.00012 Score=61.37 Aligned_cols=98 Identities=21% Similarity=0.265 Sum_probs=71.8
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHh-------cCCccEEE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGII 252 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~g~d~vi 252 (361)
-+|+++||.|+ +++|.+.++.+...|++|+++.+++++. ++.++.+...+ .|-.+.+.+.++ .+++|+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 81 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV 81 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence 47899999997 9999999999999999999999987664 56677776543 455555443332 25799999
Q ss_pred EcCCCcc-------------------------cHHHHHHhhcc--CCEEEEecCC
Q 018094 253 DTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAP 280 (361)
Q Consensus 253 d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~ 280 (361)
+++|... ..+.++..|++ +|+++.++..
T Consensus 82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~ 136 (248)
T d2d1ya1 82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV 136 (248)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccc
Confidence 9988642 22345556644 6899999764
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.74 E-value=0.00015 Score=61.56 Aligned_cols=76 Identities=17% Similarity=0.300 Sum_probs=59.4
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc---E--EecCCCHHHHHHh-------cCCc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD---S--FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~-------~~g~ 248 (361)
-+|+++||.|+ +++|.+.++.+...|++|++++++.++.+++.++++.. . ..|-.+++.+.++ .+++
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 83 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 37899999997 99999999999999999999999998888888877631 1 2355555444332 2579
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++++++|.
T Consensus 84 D~lVnnAG~ 92 (268)
T d2bgka1 84 DIMFGNVGV 92 (268)
T ss_dssp CEEEECCCC
T ss_pred ceecccccc
Confidence 999999885
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.72 E-value=0.00011 Score=62.08 Aligned_cols=97 Identities=13% Similarity=0.232 Sum_probs=69.6
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
+|+++||.|+ +++|.+.+..+...|++|++++++.++..++.+++ |.+. ..|-.+++.+.++ .+++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999997 99999999999999999999999988776665544 4432 2344555433332 3579
Q ss_pred cEEEEcCCCcc--------------------------cHHHHHHhh--ccCCEEEEecC
Q 018094 249 DGIIDTVSAVH--------------------------PLMPLIGLL--KSQGKLVLVGA 279 (361)
Q Consensus 249 d~vid~~g~~~--------------------------~~~~~~~~l--~~~G~~v~~g~ 279 (361)
|++++++|... ..+.++..+ +.+|+++.++.
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS 142 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTAS 142 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeec
Confidence 99999988532 123344444 56799999976
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.72 E-value=6.8e-05 Score=62.74 Aligned_cols=76 Identities=18% Similarity=0.358 Sum_probs=61.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHh-------cCCccEEEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAA-------MGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~g~d~vid 253 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++..++.++++...+ .|-.+++.+.++ .+++|++++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 83 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence 5789999997 9999999999999999999999999988888888887543 455665544332 257999999
Q ss_pred cCCCc
Q 018094 254 TVSAV 258 (361)
Q Consensus 254 ~~g~~ 258 (361)
++|..
T Consensus 84 nAG~~ 88 (242)
T d1ulsa_ 84 YAGIT 88 (242)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 98864
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.69 E-value=0.00012 Score=61.23 Aligned_cols=100 Identities=15% Similarity=0.292 Sum_probs=71.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHH-------hcCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQA-------AMGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~-------~~~g~ 248 (361)
.|+++||.|+ +++|...+..+...|++|++++++.++..++.++ .|.+. ..|..+.+.+.. ..+..
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i 85 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 85 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999998 9999999999999999999999999887666554 44432 245556544332 23479
Q ss_pred cEEEEcCCCcc-------------------------cHHHHHHhhcc--CCEEEEecCCCC
Q 018094 249 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLVGAPEK 282 (361)
Q Consensus 249 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 282 (361)
|++++++|... ..+.++..|.+ .|+++.++...+
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~ 146 (244)
T d1yb1a_ 86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG 146 (244)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence 99999998753 22335555544 578999987654
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.68 E-value=0.00019 Score=60.44 Aligned_cols=98 Identities=14% Similarity=0.198 Sum_probs=70.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-----CcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-----ADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-----~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.|+++||.|+ +++|.+.++.+...|++|++++++.++..+..+++. ... ..|-.+++.++++ .+
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4789999997 999999999999999999999999988777666552 121 2355555443332 25
Q ss_pred CccEEEEcCCCcc-----------------cHHHHHHhhcc-----CCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH-----------------PLMPLIGLLKS-----QGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~-----------------~~~~~~~~l~~-----~G~~v~~g~~ 280 (361)
++|++++++|... ....++..|++ +|+++.+++.
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~ 137 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL 137 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence 7999999998753 12334455533 4889999763
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=97.68 E-value=0.00014 Score=61.01 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=59.3
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cE---EecCCCHHHHHHh-------cCCc
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
-+|+++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++++. .. ..|-.+++.+.++ .+++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 36899999997 9999999999999999999999999888888777753 11 2344555433322 3589
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++++++|..
T Consensus 84 DiLVnnAg~~ 93 (251)
T d1zk4a1 84 STLVNNAGIA 93 (251)
T ss_dssp CEEEECCCCC
T ss_pred eEEEeccccc
Confidence 9999998874
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.64 E-value=0.00012 Score=61.44 Aligned_cols=98 Identities=14% Similarity=0.218 Sum_probs=69.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g~ 248 (361)
+++++||.|+ +++|.+.++.+...|++|+++.++.++..++.+++ |.+. ..|-.+++.+.++ .+++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 5788999997 99999999999999999999999988776665543 4432 2345555443322 3589
Q ss_pred cEEEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 249 DGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 249 d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
|++++++|... ..+.++..+ +.+|++|.++..
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~ 147 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI 147 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCH
Confidence 99999988743 223344444 456999999863
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.63 E-value=5.4e-05 Score=64.69 Aligned_cols=96 Identities=25% Similarity=0.424 Sum_probs=67.5
Q ss_pred CCEE-EEEcc-chHHHHHHH-HHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cCC
Q 018094 184 GMHV-GVVGL-GGLGHVAVK-FAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 184 g~~V-lI~Ga-g~vG~~a~~-la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
|.+| ||.|+ +++|+++++ |++..|++|++++++.++.+++++++ +.+. ..|-.+.+.++++ .++
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 5566 77787 999998876 45667999999999998877766655 3322 2355555444332 357
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 279 (361)
+|++++++|... ..+.++..|+++|+++.++.
T Consensus 82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS 138 (275)
T d1wmaa1 82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 138 (275)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 999999998632 12335566788999999975
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.63 E-value=0.00014 Score=56.97 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=58.5
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEE
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~v 251 (361)
..++... +.++++|||+|+|+.+.+++..++..|+ +++++.++.++...+.+.++...+.... ...+|++
T Consensus 7 ~~l~~~~-~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~--------~~~~Dli 77 (167)
T d1npya1 7 KLIEKYH-LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--------NQQADIL 77 (167)
T ss_dssp HHHHHTT-CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--------TCCCSEE
T ss_pred HHHHHcC-CCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc--------ccchhhh
Confidence 4455444 4678899999999999999999999998 8999999999888888888765432111 1358999
Q ss_pred EEcCC
Q 018094 252 IDTVS 256 (361)
Q Consensus 252 id~~g 256 (361)
++|+.
T Consensus 78 INaTp 82 (167)
T d1npya1 78 VNVTS 82 (167)
T ss_dssp EECSS
T ss_pred eeccc
Confidence 99865
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.63 E-value=7.1e-05 Score=59.00 Aligned_cols=85 Identities=20% Similarity=0.255 Sum_probs=60.6
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEE
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~v 251 (361)
..+|+......+|++|||+|+|+.+.+++..+..+|++++++.|+.++.+++++.+.....+..-..+. .....+|++
T Consensus 6 ~~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~--~~~~~~dli 83 (170)
T d1nyta1 6 LSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE--LEGHEFDLI 83 (170)
T ss_dssp HHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG--GTTCCCSEE
T ss_pred HHHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc--cccccccee
Confidence 345666554568999999999999999999999999999999999998888877765321111111111 112468999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
|+|+...
T Consensus 84 IN~Tp~G 90 (170)
T d1nyta1 84 INATSSG 90 (170)
T ss_dssp EECCSCG
T ss_pred ecccccC
Confidence 9997653
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.63 E-value=0.00029 Score=58.68 Aligned_cols=99 Identities=22% Similarity=0.357 Sum_probs=74.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccE
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~ 250 (361)
-.|+++||.|+ +++|.+.++-+...|++|+++.++.++..+..++++.+.. .|-++++.+.++ .+++|+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 46899999998 9999999999999999999999999998888888886543 344555444332 257999
Q ss_pred EEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 251 IIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.++++|... ..+..+..++.++.++.++..
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~ 137 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV 137 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeecccc
Confidence 999887542 223355667788887777654
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.62 E-value=8.4e-05 Score=62.74 Aligned_cols=76 Identities=16% Similarity=0.290 Sum_probs=61.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~v 251 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.++.++..++.+++|.+.. .|-.+++.+.++ .+++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 5789999997 9999999999999999999999999998889899986543 355555544433 2579999
Q ss_pred EEcCCCc
Q 018094 252 IDTVSAV 258 (361)
Q Consensus 252 id~~g~~ 258 (361)
++++|..
T Consensus 84 VnnAg~~ 90 (256)
T d1k2wa_ 84 VNNAALF 90 (256)
T ss_dssp EECCCCC
T ss_pred Eeecccc
Confidence 9998864
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.59 E-value=0.00019 Score=60.58 Aligned_cols=98 Identities=16% Similarity=0.216 Sum_probs=69.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------cC-C
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA-------MG-T 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~-g 247 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.++.++..++.+++ |... ..|-.+++.+.++ .+ .
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999997 99999999999999999999999988877666554 3322 2344554433322 23 5
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
.|++++++|... ..+.++..+ +.+|+++.++..
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~ 146 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV 146 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc
Confidence 999999988642 123344445 456899999764
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.59 E-value=0.00044 Score=58.21 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=55.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-----CCcE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL-----GADS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~~~~-------~~ 246 (361)
.|+++||.|+ +++|.+.++.+...|++|++++++.++.++..+++ +... ..|-.+++.+.++ .+
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 5789999997 99999999999999999999999988765554433 2222 2355565544332 35
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++++++|.
T Consensus 83 ~iDiLVnnAG~ 93 (258)
T d1iy8a_ 83 RIDGFFNNAGI 93 (258)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999884
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.58 E-value=6.5e-05 Score=61.55 Aligned_cols=100 Identities=24% Similarity=0.197 Sum_probs=68.4
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHH---HHcCCcEE-ecCCCHHHHHHhcCCccE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAI---ERLGADSF-LVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~---~~~g~~~v-~~~~~~~~~~~~~~g~d~ 250 (361)
....+++|++||-+|+|. |..++.+++..| .+|+.+..+++....+. ++.+.+.+ +...+........+.||+
T Consensus 69 ~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~ 147 (213)
T d1dl5a1 69 EWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDV 147 (213)
T ss_dssp HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEE
T ss_pred HhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccchhh
Confidence 445689999999999865 888888998876 48988888876543332 33444332 222222211112346999
Q ss_pred EEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 251 IIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 251 vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
|+...+-.+.....++.|+|+|+++..
T Consensus 148 I~~~~~~~~~p~~l~~~LkpGG~lv~p 174 (213)
T d1dl5a1 148 IFVTVGVDEVPETWFTQLKEGGRVIVP 174 (213)
T ss_dssp EEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred hhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence 999887777667889999999999873
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.58 E-value=0.00067 Score=53.20 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=72.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec--CCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV--SRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~--~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
.+++|||+|+|.+|..+++.+...|.+|+++.++.++..++.++++...+.. ..............|.++.+......
T Consensus 1 ~~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~ 80 (182)
T d1e5qa1 1 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH 80 (182)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhh
Confidence 3688999999999999999999999999999999999888877776543322 22233334444578888888776654
Q ss_pred HHHHHHhhccCCEEEEecCC
Q 018094 261 LMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~~ 280 (361)
......+++.+-.++.+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ 100 (182)
T d1e5qa1 81 ATVIKSAIRQKKHVVTTSYV 100 (182)
T ss_dssp HHHHHHHHHHTCEEECSSCC
T ss_pred hHHHHHHHhhccceeecccC
Confidence 55566666777777776543
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=0.00027 Score=59.53 Aligned_cols=76 Identities=16% Similarity=0.166 Sum_probs=57.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC--cE---EecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--DS---FLVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~--~~---v~~~~~~~~~~~~-------~~ 246 (361)
+|+++||.|+ +++|.+.+..+...|++|+++.++.++.+++.+++ +. .. ..|-.+++.+.++ .+
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 5789999997 99999999999999999999999988877765554 22 21 2355555443332 35
Q ss_pred CccEEEEcCCCc
Q 018094 247 TMDGIIDTVSAV 258 (361)
Q Consensus 247 g~d~vid~~g~~ 258 (361)
++|++++++|..
T Consensus 89 ~iD~lVnnAg~~ 100 (257)
T d1xg5a_ 89 GVDICINNAGLA 100 (257)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEeccccc
Confidence 799999999874
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.56 E-value=0.00047 Score=57.59 Aligned_cols=98 Identities=13% Similarity=0.239 Sum_probs=69.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHHcCCcEE---ecCCCHHHHHHh-------cCCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAIERLGADSF---LVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~~~~~g~~~v---~~~~~~~~~~~~-------~~g~d~ 250 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.+++++ .....+++|.+.. .|-.+++.+.++ .+++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5789999997 999999999999999999999987643 3455567776432 355555444332 357999
Q ss_pred EEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 251 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
+++++|... ..+.++..| +.+|+++.+++.
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~ 140 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTST 140 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccc
Confidence 999988743 123344455 345899999764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.55 E-value=0.00016 Score=61.11 Aligned_cols=99 Identities=18% Similarity=0.263 Sum_probs=67.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHH----h---c-CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQA----A---M-GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~-~g 247 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.++.++..+..+++ +... ..|-.+++.+.+ . . +.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999997 99999999999999999999999988877766554 3222 235555443222 1 2 35
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCCC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAPE 281 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~ 281 (361)
+|++++++|... ..+.++..| +.+|+++.++...
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~ 147 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA 147 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence 899999998743 123344445 3468999997643
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.54 E-value=0.00067 Score=49.17 Aligned_cols=96 Identities=11% Similarity=-0.024 Sum_probs=66.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKK-SEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
.|++|||+|+|.+|..-++.+...|++|++++...... ..+.++-..+..-..-++ +...++++|+.+.+....-
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~----~dl~~~~lv~~at~d~~~n 86 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE----TLLDSCWLAIAATDDDTVN 86 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG----GGGTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH----HHhCCCcEEeecCCCHHHH
Confidence 57899999999999999999999999999988665432 222222122222111111 1234789999999887733
Q ss_pred HHHHHhhccCCEEEEecCCCC
Q 018094 262 MPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~ 282 (361)
.......++.|..|++...+.
T Consensus 87 ~~i~~~a~~~~ilVNv~D~p~ 107 (113)
T d1pjqa1 87 QRVSDAAESRRIFCNVVDAPK 107 (113)
T ss_dssp HHHHHHHHHTTCEEEETTCTT
T ss_pred HHHHHHHHHcCCEEEeCCChh
Confidence 466678899999999876443
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.50 E-value=0.00015 Score=61.93 Aligned_cols=75 Identities=27% Similarity=0.339 Sum_probs=59.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cCCccEE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MGTMDGI 251 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~g~d~v 251 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++..++.+++|.+. ..|..+.+.+.++ .+++|++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 5899999997 999999999999999999999999998888888887543 2344555433332 3579999
Q ss_pred EEcCCC
Q 018094 252 IDTVSA 257 (361)
Q Consensus 252 id~~g~ 257 (361)
++++|.
T Consensus 84 vnnAG~ 89 (276)
T d1bdba_ 84 IPNAGI 89 (276)
T ss_dssp ECCCCC
T ss_pred cccccc
Confidence 999884
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.49 E-value=0.00012 Score=59.86 Aligned_cols=100 Identities=29% Similarity=0.319 Sum_probs=69.9
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKK---SEAIERLGADSF-LVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~---~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vi 252 (361)
....+++|++||.+|+| .|..++.+++..|.+|+.+...++-. .+..+++|.+.+ +...+...-......||.|+
T Consensus 72 ~~L~l~~g~~VLeIGsG-sGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Ii 150 (215)
T d1jg1a_ 72 EIANLKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVII 150 (215)
T ss_dssp HHHTCCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEE
T ss_pred HhhccCccceEEEecCC-CChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEE
Confidence 34458999999999985 47778888888788899998886532 333456776443 22233211111234799999
Q ss_pred EcCCCcccHHHHHHhhccCCEEEEe
Q 018094 253 DTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
-+.+........++.|++||+++..
T Consensus 151 v~~a~~~ip~~l~~qL~~gGrLv~p 175 (215)
T d1jg1a_ 151 VTAGAPKIPEPLIEQLKIGGKLIIP 175 (215)
T ss_dssp ECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred eecccccCCHHHHHhcCCCCEEEEE
Confidence 9888777678899999999999864
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.44 E-value=0.00049 Score=57.96 Aligned_cols=98 Identities=14% Similarity=0.240 Sum_probs=67.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH----HHcCCcEE---ecCCCHHHHHHh-------cC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAI----ERLGADSF---LVSRDQDEMQAA-------MG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~-~~~~~~----~~~g~~~v---~~~~~~~~~~~~-------~~ 246 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.+++. +.+++. ++.|.... .|-.+++.+.++ .+
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 6889999997 99999999999999999999998753 333332 33454433 244555443332 25
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHHhhc--cCCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~ 280 (361)
++|++++++|... ..+.++..|+ .+|+++.++..
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~ 143 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA 143 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence 7999999998643 2233455554 35899999764
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.0013 Score=50.60 Aligned_cols=104 Identities=14% Similarity=0.193 Sum_probs=77.1
Q ss_pred hhHHHHh-hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCcc
Q 018094 171 VYSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 171 a~~~l~~-~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d 249 (361)
.+.++.+ ....-.|++|+|.|-|-+|.-.++.++.+|++|+++...+.+..++ .+..-.+. .+.+.....|
T Consensus 10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A--~~dG~~v~------~~~~a~~~ad 81 (163)
T d1li4a1 10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQA--AMEGYEVT------TMDEACQEGN 81 (163)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--HHTTCEEC------CHHHHTTTCS
T ss_pred HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHh--hcCceEee------ehhhhhhhcc
Confidence 3444444 4445689999999999999999999999999999999987665444 23222221 2334455689
Q ss_pred EEEEcCCCccc-HHHHHHhhccCCEEEEecCCCC
Q 018094 250 GIIDTVSAVHP-LMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 250 ~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
+++-+.|+.+. -..-++.|+++..++++|....
T Consensus 82 ivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd~ 115 (163)
T d1li4a1 82 IFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDV 115 (163)
T ss_dssp EEEECSSCSCSBCHHHHTTCCTTEEEEECSSSTT
T ss_pred EEEecCCCccchhHHHHHhccCCeEEEEeccccc
Confidence 99999998653 4578889999999999986543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00071 Score=57.22 Aligned_cols=100 Identities=22% Similarity=0.255 Sum_probs=67.9
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcEE---ecCCCHHH-------HHHhcC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF---LVSRDQDE-------MQAAMG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~v---~~~~~~~~-------~~~~~~ 246 (361)
-+|+++||.|+ +++|++.+..+...|++|++++++.++.+++.+++ +.... .+..+.+. +....+
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 36899999998 99999999999999999999999998877665542 33221 12333322 222235
Q ss_pred CccEEEEcCCCcc-------------------------cHHHHHHhh-ccCCEEEEecCCC
Q 018094 247 TMDGIIDTVSAVH-------------------------PLMPLIGLL-KSQGKLVLVGAPE 281 (361)
Q Consensus 247 g~d~vid~~g~~~-------------------------~~~~~~~~l-~~~G~~v~~g~~~ 281 (361)
..|++++++|... ..+.++..| +.+|+++.++...
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~ 152 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLA 152 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccch
Confidence 7999999877642 112233344 4578999887543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.36 E-value=0.00053 Score=57.66 Aligned_cols=97 Identities=21% Similarity=0.238 Sum_probs=68.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHHcCCcEE---ecCCCHHHHHH-------hcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEA---IERLGADSF---LVSRDQDEMQA-------AMGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~---~~~~g~~~v---~~~~~~~~~~~-------~~~g 247 (361)
.|+++||.|+ +++|.+.++.+...|++|++..+++++ .+++ .++.|.+.+ .|-.+++.+++ ..++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 5899999997 999999999999999999987666543 2332 345565433 24445443332 2347
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~ 279 (361)
.|++++++|... ..+.++..++++|.++.+..
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s 141 (259)
T d1ja9a_ 85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS 141 (259)
T ss_dssp EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence 999999998753 33556777888888887754
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.33 E-value=0.00042 Score=48.37 Aligned_cols=71 Identities=24% Similarity=0.325 Sum_probs=49.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--GADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~--g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.|++|+|+|.|..|+++++++...|++|++.+....... .+.+ +....+...+.+.+. ++|.++-+-|-+.
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~d~vi~SPGi~~ 76 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPEAVERHTGSLNDEWLM----AADLIVASPGIAL 76 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCTTSCEEESBCCHHHHH----HCSEEEECTTSCT
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhhccceeecccchhhhc----cCCEEEECCCCCC
Confidence 567899999999999999999999999999998654211 1122 223333333333332 4799988877765
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.32 E-value=0.00043 Score=56.79 Aligned_cols=99 Identities=19% Similarity=0.067 Sum_probs=65.2
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--cEEecCCCHHHHHHhcCCccEEEEc
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--DSFLVSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~g~d~vid~ 254 (361)
....+++|++||-+|+| .|..++.+++. +.+|+.+...++....+.+.+.. ...+...+........+.||.|+-+
T Consensus 64 ~~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~~~~pfD~Iiv~ 141 (224)
T d1vbfa_ 64 DELDLHKGQKVLEIGTG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVW 141 (224)
T ss_dssp HHTTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEES
T ss_pred HHhhhcccceEEEecCC-CCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcchhhhhHHHHHhh
Confidence 44568999999999986 56777778876 56999988877655443222221 1111122211100112469999988
Q ss_pred CCCcccHHHHHHhhccCCEEEEe
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
.+.+......++.|++||+++..
T Consensus 142 ~a~~~ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 142 ATAPTLLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp SBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cchhhhhHHHHHhcCCCCEEEEE
Confidence 77777677888999999999875
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.32 E-value=0.0012 Score=55.78 Aligned_cols=98 Identities=21% Similarity=0.265 Sum_probs=69.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHHcCCcEE---ecCCCHHHHHH-------hcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEA---IERLGADSF---LVSRDQDEMQA-------AMGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~---~~~~g~~~v---~~~~~~~~~~~-------~~~g 247 (361)
.|+++||.|+ +++|.+.++.+...|++|+++.++.++ .+++ .++.|.+.. .|-.+++.+.+ ..++
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5899999997 999999999999999999999877543 2222 345565433 24445443332 2357
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.|+++.++|... ..+.++..|.++|+++.++..
T Consensus 97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~ 154 (272)
T d1g0oa_ 97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 154 (272)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence 999999988753 234566778889999988653
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.30 E-value=0.0013 Score=49.09 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=59.4
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCcc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVH 259 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~g~d~vid~~g~~~ 259 (361)
+|+|.|.|.+|+..++.+...|.+|++++.++++..++.++++...+. |..+.+.+.++. ..+|.++-+.....
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~ 77 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 77 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence 589999999999999999999999999999999887776677765444 344556665553 47999999888864
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.28 E-value=0.00088 Score=57.62 Aligned_cols=98 Identities=17% Similarity=0.303 Sum_probs=66.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHHc---CCcEEecCCCHHH----HH---
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAIERL---GADSFLVSRDQDE----MQ--- 242 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~---------~~~~~~~~~~---g~~~v~~~~~~~~----~~--- 242 (361)
.|+++||.|+ +++|.+.++.+...|++|++.+++. +...++.+++ +.....+..+.+. +.
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 6899999998 9999999999999999999986543 2233333333 3444455554332 22
Q ss_pred HhcCCccEEEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 243 AAMGTMDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 243 ~~~~g~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
+..+++|++++++|... ..+.++..| +.+|++|.++..
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~ 150 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA 150 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence 22357999999998643 223455556 345899999863
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.26 E-value=0.00047 Score=57.90 Aligned_cols=76 Identities=18% Similarity=0.340 Sum_probs=57.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEE---ecCCCHHHHHHh-------cCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTM 248 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~g~ 248 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.++.++.+++.++ .|.+.. .|-.+++.+.++ .+++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i 89 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 6899999997 9999999999999999999999998876665544 454332 344555443332 3579
Q ss_pred cEEEEcCCCc
Q 018094 249 DGIIDTVSAV 258 (361)
Q Consensus 249 d~vid~~g~~ 258 (361)
|++++++|..
T Consensus 90 DilvnnAG~~ 99 (255)
T d1fmca_ 90 DILVNNAGGG 99 (255)
T ss_dssp CEEEECCCCC
T ss_pred CEeeeCCcCC
Confidence 9999998874
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.26 E-value=0.00018 Score=60.21 Aligned_cols=78 Identities=19% Similarity=0.231 Sum_probs=59.2
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHh---cCCccEEEEcCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAA---MGTMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~---~~g~d~vid~~g 256 (361)
-.|+++||.|+ +++|.+.++.+...|++|+++++++++..++.+..+.+. +.|....+.+... .++.|++++++|
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 46899999997 999999999999999999999999888777655555432 3344444443333 358999999988
Q ss_pred Ccc
Q 018094 257 AVH 259 (361)
Q Consensus 257 ~~~ 259 (361)
...
T Consensus 84 ~~~ 86 (245)
T d2ag5a1 84 FVH 86 (245)
T ss_dssp CCC
T ss_pred ccC
Confidence 753
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.24 E-value=0.00043 Score=59.56 Aligned_cols=78 Identities=21% Similarity=0.262 Sum_probs=58.2
Q ss_pred CCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--------CCcEE---ecCCCHHHHHHh----
Q 018094 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL--------GADSF---LVSRDQDEMQAA---- 244 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~--------g~~~v---~~~~~~~~~~~~---- 244 (361)
.-+|+++||.|+ +++|.+.++.+...|++|++++++.++..+..+++ +...+ .|-.+++.+.++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 357899999997 99999999999999999999999988776665544 22222 344555443332
Q ss_pred ---cCCccEEEEcCCCc
Q 018094 245 ---MGTMDGIIDTVSAV 258 (361)
Q Consensus 245 ---~~g~d~vid~~g~~ 258 (361)
.++.|++++++|..
T Consensus 89 ~~~~G~iDiLVnnAg~~ 105 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQ 105 (297)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCeEEEEeecccc
Confidence 25799999998864
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.22 E-value=0.00042 Score=57.49 Aligned_cols=71 Identities=20% Similarity=0.184 Sum_probs=53.0
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHh-------cCCccEEEEc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAA-------MGTMDGIIDT 254 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-------~~g~d~vid~ 254 (361)
.|+++||.|+ +++|.+.++.+...|++|+++.++.++..++ .....|..+++.+.++ .+++|+++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 80 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCc-----eEEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence 6899999997 9999999999999999999999987654321 1223455565443332 3579999999
Q ss_pred CCCc
Q 018094 255 VSAV 258 (361)
Q Consensus 255 ~g~~ 258 (361)
+|..
T Consensus 81 AG~~ 84 (237)
T d1uzma1 81 AGLS 84 (237)
T ss_dssp CSCC
T ss_pred eccc
Confidence 8864
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.21 E-value=0.00043 Score=58.75 Aligned_cols=75 Identities=19% Similarity=0.319 Sum_probs=56.4
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC---c---EEecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA---D---SFLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~---~---~v~~~~~~~~~~~~-------~ 245 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++.+++.+++ +. . ...|-.+++.+.++ .
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6889999997 99999999999999999999999988776665543 22 1 12355555443332 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++++++|.
T Consensus 84 g~iDilvnnAG~ 95 (272)
T d1xkqa_ 84 GKIDVLVNNAGA 95 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCceEEEeCCcc
Confidence 579999999876
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=97.21 E-value=0.0039 Score=47.57 Aligned_cols=98 Identities=16% Similarity=0.171 Sum_probs=75.2
Q ss_pred HhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+....+-.|++++|.|-|-+|.-.++-+|.+|++|+++...+-+..++ .+..-.+ -.+.+.....|+++-++
T Consensus 15 r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA--~mdGf~v------~~~~~a~~~aDi~vTaT 86 (163)
T d1v8ba1 15 RATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA--VMEGFNV------VTLDEIVDKGDFFITCT 86 (163)
T ss_dssp HHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH--HTTTCEE------CCHHHHTTTCSEEEECC
T ss_pred HHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHH--HhcCCcc------CchhHccccCcEEEEcC
Confidence 333445799999999999999999999999999999999887654444 2222222 12345556789999999
Q ss_pred CCccc-HHHHHHhhccCCEEEEecCCC
Q 018094 256 SAVHP-LMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 256 g~~~~-~~~~~~~l~~~G~~v~~g~~~ 281 (361)
|+.+. -..-++.|+.+..++++|...
T Consensus 87 Gn~~vI~~~h~~~MKdgaIl~N~GHfd 113 (163)
T d1v8ba1 87 GNVDVIKLEHLLKMKNNAVVGNIGHFD 113 (163)
T ss_dssp SSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred CCCccccHHHHHHhhCCeEEEeccccc
Confidence 99864 456788999999999998754
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.21 E-value=0.0005 Score=57.82 Aligned_cols=77 Identities=19% Similarity=0.263 Sum_probs=57.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcE---EecCCCHHHHHH-------hc-CC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADS---FLVSRDQDEMQA-------AM-GT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~-------~~-~g 247 (361)
+|+++||.|+ +++|.+.++.+...|++|+++++++++.+++.++ .+... ..|-.+.+.+++ .. +.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 6899999997 9999999999999999999999998776665444 44433 235555544332 22 35
Q ss_pred ccEEEEcCCCcc
Q 018094 248 MDGIIDTVSAVH 259 (361)
Q Consensus 248 ~d~vid~~g~~~ 259 (361)
.|++++++|...
T Consensus 85 idilinnag~~~ 96 (258)
T d1ae1a_ 85 LNILVNNAGVVI 96 (258)
T ss_dssp CCEEEECCCCCC
T ss_pred cEEEeccccccc
Confidence 899999988754
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=97.19 E-value=0.00053 Score=57.73 Aligned_cols=76 Identities=22% Similarity=0.329 Sum_probs=56.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----HcCCcE---EecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE----RLGADS---FLVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~-------~~g 247 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.++.++..+..+ ++|.+. ..|-.+++.+.++ .++
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999997 999999999999999999999999887655443 446543 2355555443332 357
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++++++|..
T Consensus 88 iDilVnnAg~~ 98 (260)
T d1h5qa_ 88 ISGLIANAGVS 98 (260)
T ss_dssp EEEEEECCCCC
T ss_pred CcEeccccccc
Confidence 99999998854
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.16 E-value=0.00044 Score=58.41 Aligned_cols=75 Identities=16% Similarity=0.280 Sum_probs=55.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC--c-E---EecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D-S---FLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~--~-~---v~~~~~~~~~~~~-------~ 245 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++..++.+++ +. . . ..|-.+++.+.++ .
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 6889999997 99999999999999999999999988776665543 22 1 1 2355555444332 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++++++|.
T Consensus 84 g~iDilvnnAG~ 95 (264)
T d1spxa_ 84 GKLDILVNNAGA 95 (264)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEeeccccc
Confidence 579999999885
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.15 E-value=0.00041 Score=56.11 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=66.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
.++|+|+|+ |.+|...+..+...|.+|++++++.++.... ...+.+.+ .|..+.+.+.+...+.|+||.++|...
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-cccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 467999998 9999999998888999999999988765322 12234333 245666777777789999999988632
Q ss_pred --------cHHHHHHhhccCC--EEEEecC
Q 018094 260 --------PLMPLIGLLKSQG--KLVLVGA 279 (361)
Q Consensus 260 --------~~~~~~~~l~~~G--~~v~~g~ 279 (361)
.....++.++..| +++.++.
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss 111 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTS 111 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence 1223455555443 7887754
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.14 E-value=0.00057 Score=57.42 Aligned_cols=75 Identities=17% Similarity=0.234 Sum_probs=55.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEE---ecCCCHHHHHHh-------cCCcc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~g~d 249 (361)
|+.+||.|+ +++|.+.++.+...|++|+++.++.++.++..++ .|.+.. .|-.+++.+.++ .+++|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 677899997 9999999999999999999999998876665544 454332 344555443332 35799
Q ss_pred EEEEcCCCc
Q 018094 250 GIIDTVSAV 258 (361)
Q Consensus 250 ~vid~~g~~ 258 (361)
++++++|..
T Consensus 82 ilVnnAG~~ 90 (257)
T d2rhca1 82 VLVNNAGRP 90 (257)
T ss_dssp EEEECCCCC
T ss_pred EEEeccccc
Confidence 999998864
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.13 E-value=0.0024 Score=50.37 Aligned_cols=106 Identities=15% Similarity=0.157 Sum_probs=68.4
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHH---HHHHHcC----C-cEEecCCCHHHHHH
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS---EAIERLG----A-DSFLVSRDQDEMQA 243 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~---~~~~~~g----~-~~v~~~~~~~~~~~ 243 (361)
.+++....--.+.+|||+|+|+.+.+++..+...|+ +++++.++.++.. .++++++ . ..+.+..+.+.+..
T Consensus 7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (182)
T d1vi2a1 7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE 86 (182)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhh
Confidence 445554432467899999999999999999998998 7888888766433 2333333 2 22344555555555
Q ss_pred hcCCccEEEEcCCCccc------HHHHHHhhccCCEEEEec
Q 018094 244 AMGTMDGIIDTVSAVHP------LMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 244 ~~~g~d~vid~~g~~~~------~~~~~~~l~~~G~~v~~g 278 (361)
....+|++|+|+.-... +..-...++++..++++-
T Consensus 87 ~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~ 127 (182)
T d1vi2a1 87 ALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV 127 (182)
T ss_dssp HHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred hhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence 55689999999764210 111134567777777773
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.11 E-value=0.0005 Score=53.94 Aligned_cols=103 Identities=19% Similarity=0.139 Sum_probs=66.1
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-EEecCCCHHHHHHhcCCccEE
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-SFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~g~d~v 251 (361)
.+++......++++|+|+|+|+.+.+++..+...+.+++++.|+.++...+++.++.. .+..... + ......+|++
T Consensus 7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~-~--~~~~~~~dii 83 (171)
T d1p77a1 7 TDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM-D--SIPLQTYDLV 83 (171)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-G--GCCCSCCSEE
T ss_pred HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhh-c--ccccccccee
Confidence 3454444345889999999999999999988887789999999999888888877531 1111111 1 0112479999
Q ss_pred EEcCCCcccHH---HHHHhhccCCEEEEec
Q 018094 252 IDTVSAVHPLM---PLIGLLKSQGKLVLVG 278 (361)
Q Consensus 252 id~~g~~~~~~---~~~~~l~~~G~~v~~g 278 (361)
|+|+.....-. .-...++++..++.+-
T Consensus 84 IN~tp~g~~~~~~~~~~~~~~~~~~~~D~v 113 (171)
T d1p77a1 84 INATSAGLSGGTASVDAEILKLGSAFYDMQ 113 (171)
T ss_dssp EECCCC-------CCCHHHHHHCSCEEESC
T ss_pred eecccccccccccchhhhhhcccceeeeee
Confidence 99987642110 1123355666666653
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.11 E-value=0.0013 Score=56.26 Aligned_cols=76 Identities=20% Similarity=0.256 Sum_probs=56.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCcEE---ecCCCHHHHHH-------hcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGADSF---LVSRDQDEMQA-------AMGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~~v---~~~~~~~~~~~-------~~~g 247 (361)
+|+++||.|+ +++|.+++..+...|++|+++.++.++..+..++ .|.... .|-.+.+.+.. ..++
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 103 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 103 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence 6899999997 9999999999999999999999998776555443 354332 24445444332 2357
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++++++|..
T Consensus 104 iDilvnnAg~~ 114 (294)
T d1w6ua_ 104 PNIVINNAAGN 114 (294)
T ss_dssp CSEEEECCCCC
T ss_pred cchhhhhhhhc
Confidence 99999998864
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.00067 Score=55.67 Aligned_cols=97 Identities=26% Similarity=0.230 Sum_probs=64.4
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHH---HHcCCc-----EE-ecCCCHHHHHHhcCCc
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAI---ERLGAD-----SF-LVSRDQDEMQAAMGTM 248 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~---~~~g~~-----~v-~~~~~~~~~~~~~~g~ 248 (361)
.+++|++||-+|+| .|..++.+|+..| .+|+.+...++-...+. ++.+.+ .+ +...+..........|
T Consensus 73 ~l~~g~~VLdiG~G-sGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~~~~~~f 151 (224)
T d1i1na_ 73 QLHEGAKALDVGSG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPY 151 (224)
T ss_dssp TSCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred ccCCCCeEEEecCC-CCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccccchhhhh
Confidence 57999999999985 4788888888765 48999988876443322 232321 11 1111111111112369
Q ss_pred cEEEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 249 DGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 249 d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
|.|+-+....+.....++.|++||+++..
T Consensus 152 D~I~~~~~~~~ip~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 152 DAIHVGAAAPVVPQALIDQLKPGGRLILP 180 (224)
T ss_dssp EEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred hhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence 99999888777678899999999999874
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.08 E-value=0.00054 Score=58.19 Aligned_cols=75 Identities=19% Similarity=0.348 Sum_probs=55.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc---CC--c----EEecCCCHHHHHHh-------c
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL---GA--D----SFLVSRDQDEMQAA-------M 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~---g~--~----~v~~~~~~~~~~~~-------~ 245 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++.+++.+++ +. . ...|-.+++.+.++ .
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 6899999997 99999999999999999999999988766665443 32 1 12355555443332 2
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++++++|.
T Consensus 83 G~iDilVnnAG~ 94 (274)
T d1xhla_ 83 GKIDILVNNAGA 94 (274)
T ss_dssp SCCCEEEECCCC
T ss_pred CCceEEEeeccc
Confidence 479999999885
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.07 E-value=0.00084 Score=56.24 Aligned_cols=75 Identities=23% Similarity=0.361 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcEE--ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF--LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~v--~~~~~~~~~~~~-------~~g 247 (361)
+|+++||.|+ | ++|.+.++.+...|++|++..++++...+. .+..+.... .|..+++.+.++ .++
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 6899999997 5 799999999999999999888876543322 223333232 244555433332 357
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
.|+.++++|.
T Consensus 87 iDilVnnag~ 96 (256)
T d1ulua_ 87 LDYLVHAIAF 96 (256)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEecccc
Confidence 9999999875
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.05 E-value=0.00011 Score=61.11 Aligned_cols=92 Identities=23% Similarity=0.207 Sum_probs=60.7
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecC--CCHH-------HHHHhc--CCccE
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVS--RDQD-------EMQAAM--GTMDG 250 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~--~~~~-------~~~~~~--~g~d~ 250 (361)
+|++|||.|+ +++|.+.++.+...|++|++++....+.. .....+.. ...+ .+.+.. +++|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~ 74 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 74 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence 4789999998 99999999999999999999877654311 11111111 1111 111211 25899
Q ss_pred EEEcCCCcc--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 251 IIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 251 vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
+++++|... ..+.++..++++|+++.++..
T Consensus 75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~ 130 (236)
T d1dhra_ 75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK 130 (236)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence 999988421 223356677899999999764
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.02 E-value=0.0013 Score=54.65 Aligned_cols=96 Identities=19% Similarity=0.246 Sum_probs=64.5
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHH---HHcCCcE---EecCCCHHHHHHh-------cCCcc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAI---ERLGADS---FLVSRDQDEMQAA-------MGTMD 249 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~-~~~~~~~---~~~g~~~---v~~~~~~~~~~~~-------~~g~d 249 (361)
..|||.|+ +++|++.++.+...|++|++.+.++ +..+++. +++|.+. ..|-.+++.+.++ .+++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35788887 9999999999999999999876544 3333332 3455432 2355555443332 35799
Q ss_pred EEEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 250 GIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 250 ~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
++++++|... ..+.++..| +.+|+++.++..
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~ 139 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV 139 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence 9999988643 224455555 567999999864
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.99 E-value=0.0027 Score=52.97 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=64.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCcE----EecCC-CHHHHH-------HhcC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGADS----FLVSR-DQDEMQ-------AAMG 246 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~~----v~~~~-~~~~~~-------~~~~ 246 (361)
+|++|||.|+ +++|.+.+..+...|++|+++.+..++...+. ...+... ..|.. +.+.+. +..+
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 5899999997 89999999999999999999988776544332 2233222 22332 322222 2235
Q ss_pred CccEEEEcCCCcc-----------------cHHHHHHhhc-----cCCEEEEecCC
Q 018094 247 TMDGIIDTVSAVH-----------------PLMPLIGLLK-----SQGKLVLVGAP 280 (361)
Q Consensus 247 g~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~ 280 (361)
++|++++++|... ..+.++..|. ++|+++.++..
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~ 139 (254)
T d1sbya1 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV 139 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEech
Confidence 7999999999753 1233444452 35889988753
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.98 E-value=0.0022 Score=52.83 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=54.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCC-CHHHHHHhcCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSR-DQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~-~~~~~~~~~~g~d~vid~~g~~ 258 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++++.. ++.+...+ .|-. ..+.+.+..+++|++++++|..
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l----~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~ 77 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP 77 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence 5789999997 9999999999999999999999876543 55565433 2322 2344445557899999998864
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.96 E-value=0.0027 Score=49.85 Aligned_cols=83 Identities=20% Similarity=0.210 Sum_probs=57.8
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC---------HHHHHHhcCCccEEEEcC
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD---------QDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~---------~~~~~~~~~g~d~vid~~ 255 (361)
.++-|+|+|.+|.+.+..+...|.+|+++++++++...+ ++.+......... .....+....+|++|-++
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v 80 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEI-QDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 80 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence 679999999999999999999999999999988776555 4444322111000 112344556799999998
Q ss_pred CCcccHHHHHHhhc
Q 018094 256 SAVHPLMPLIGLLK 269 (361)
Q Consensus 256 g~~~~~~~~~~~l~ 269 (361)
.... ....++.++
T Consensus 81 ~~~~-~~~~~~~i~ 93 (184)
T d1bg6a2 81 PAIH-HASIAANIA 93 (184)
T ss_dssp CGGG-HHHHHHHHG
T ss_pred chhH-HHHHHHHhh
Confidence 8765 555554444
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=96.94 E-value=0.0015 Score=54.12 Aligned_cols=96 Identities=13% Similarity=0.188 Sum_probs=65.8
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCe-------EEEEeCCchhHHHHHHHc---CCcE---EecCCCHHHHHHh-------
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVK-------VTVISTSPSKKSEAIERL---GADS---FLVSRDQDEMQAA------- 244 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~-------Vi~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~------- 244 (361)
.|||.|+ +++|.+.+..+...|++ |+...++.++.+++.+++ |... ..|-.+++.+.++
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4688997 99999999988888887 888888887766665543 4332 2355555443332
Q ss_pred cCCccEEEEcCCCcc-------------------------cHHHHHHhhc--cCCEEEEecCCC
Q 018094 245 MGTMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLVGAPE 281 (361)
Q Consensus 245 ~~g~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~ 281 (361)
.+++|++++++|... ..+.++..|+ .+|+++.++...
T Consensus 83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~ 146 (240)
T d2bd0a1 83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVA 146 (240)
T ss_dssp TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechh
Confidence 357999999988642 2234555563 468999997643
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.90 E-value=0.0019 Score=54.27 Aligned_cols=76 Identities=20% Similarity=0.246 Sum_probs=54.9
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHHcCCcEE---ecCCCHHHHHHh-------cCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEA---IERLGADSF---LVSRDQDEMQAA-------MGT 247 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-~~~~---~~~~g~~~v---~~~~~~~~~~~~-------~~g 247 (361)
+|+++||.|+ +++|.+.++.+...|++|+++.++.+. .+++ +++.|.+.. .|-.+++.+.++ .++
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999997 999999999999999999999988653 2222 345565432 345555444332 257
Q ss_pred ccEEEEcCCCc
Q 018094 248 MDGIIDTVSAV 258 (361)
Q Consensus 248 ~d~vid~~g~~ 258 (361)
+|++++++|..
T Consensus 86 iDiLVnnAG~~ 96 (261)
T d1geea_ 86 LDVMINNAGLE 96 (261)
T ss_dssp CCEEEECCCCC
T ss_pred CCEeeccceec
Confidence 99999998874
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.86 E-value=0.0014 Score=54.77 Aligned_cols=74 Identities=19% Similarity=0.272 Sum_probs=54.4
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEE---ecCCCHHHHHHh-------cCCccE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSF---LVSRDQDEMQAA-------MGTMDG 250 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~g~d~ 250 (361)
+.+||.|+ +++|.+.+..+...|++|++++++.++..++.++ .|.+.. .|-.+++.+.++ .+++|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 34688997 9999999999999999999999998876666544 454332 355555443332 357999
Q ss_pred EEEcCCCc
Q 018094 251 IIDTVSAV 258 (361)
Q Consensus 251 vid~~g~~ 258 (361)
+++++|..
T Consensus 82 lVnnAG~~ 89 (255)
T d1gega_ 82 IVNNAGVA 89 (255)
T ss_dssp EEECCCCC
T ss_pred EEeccccc
Confidence 99998864
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.75 E-value=0.0057 Score=50.83 Aligned_cols=72 Identities=14% Similarity=0.021 Sum_probs=49.9
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEEecCCCHH-H---HHHhcCCccEEEEcCCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSFLVSRDQD-E---MQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v~~~~~~~-~---~~~~~~g~d~vid~~g~ 257 (361)
++||.|+ +++|++.++.+...|++|++.+++.++..++.+ .+..-.+.+..+.+ . +.+..+++|++++++|.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 7899997 899999999999999999999888776655422 22233333433322 2 22233589999998764
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.68 E-value=0.005 Score=50.95 Aligned_cols=48 Identities=19% Similarity=0.320 Sum_probs=44.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD 230 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~ 230 (361)
+|+++||.|+ +++|.+.++.+...|++|++++++.++.++..++++..
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence 6899999997 99999999999999999999999999988888888764
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.65 E-value=0.0021 Score=53.51 Aligned_cols=74 Identities=15% Similarity=0.106 Sum_probs=52.8
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCcE---EecCCCHHHHHHh-------cC--Cc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADS---FLVSRDQDEMQAA-------MG--TM 248 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~--g~ 248 (361)
.++|||.|+ +++|.+.++.+...|+ +|+.+.++.++..++.+..+... .+|-.+.+.+++. .+ +.
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 478999998 9999999998888886 78888999888777744444322 2355555433322 12 58
Q ss_pred cEEEEcCCC
Q 018094 249 DGIIDTVSA 257 (361)
Q Consensus 249 d~vid~~g~ 257 (361)
|++++++|.
T Consensus 83 dilinnAG~ 91 (250)
T d1yo6a1 83 SLLINNAGV 91 (250)
T ss_dssp CEEEECCCC
T ss_pred EEEEEcCcc
Confidence 999999985
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.64 E-value=0.00029 Score=58.46 Aligned_cols=91 Identities=23% Similarity=0.282 Sum_probs=59.7
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCC--H-------HHHHHh--cCCccEE
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRD--Q-------DEMQAA--MGTMDGI 251 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~--~-------~~~~~~--~~g~d~v 251 (361)
+.+|||.|+ +++|.+.++.+...|++|++++++.++.. .....+.... . +.+... .+++|++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence 346899998 99999999999999999999988765321 1111111111 1 111121 1368999
Q ss_pred EEcCCCcc--------------------------cHHHHHHhhccCCEEEEecCC
Q 018094 252 IDTVSAVH--------------------------PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 252 id~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 280 (361)
++++|... ..+..+..|+++|+++.++..
T Consensus 76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~ 130 (235)
T d1ooea_ 76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA 130 (235)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence 99988521 123456677899999999764
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.64 E-value=0.0029 Score=48.27 Aligned_cols=86 Identities=15% Similarity=0.243 Sum_probs=66.2
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 265 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~ 265 (361)
+|.++|+|.+|.+.+.-+...|.++++..++.++..++.+++|.... .+. .+.....|+||-++-... +...+
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~---~~~---~~~~~~~dvIilavkp~~-~~~vl 74 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA---MSH---QDLIDQVDLVILGIKPQL-FETVL 74 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC---SSH---HHHHHTCSEEEECSCGGG-HHHHH
T ss_pred EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee---chh---hhhhhccceeeeecchHh-HHHHh
Confidence 47788999999988887777788999999999988888888886532 122 222346899999986544 78888
Q ss_pred HhhccCCEEEEec
Q 018094 266 GLLKSQGKLVLVG 278 (361)
Q Consensus 266 ~~l~~~G~~v~~g 278 (361)
+.++++..++.+.
T Consensus 75 ~~l~~~~~iis~~ 87 (152)
T d2ahra2 75 KPLHFKQPIISMA 87 (152)
T ss_dssp TTSCCCSCEEECC
T ss_pred hhcccceeEeccc
Confidence 8888888887774
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=96.56 E-value=0.0084 Score=45.97 Aligned_cols=96 Identities=18% Similarity=0.145 Sum_probs=73.5
Q ss_pred cccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHH
Q 018094 162 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDE 240 (361)
Q Consensus 162 a~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 240 (361)
..+||+..+.+..|+...---.|++|+|+|. ..+|.-.+.++...|++|++..+......+.
T Consensus 15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~----------------- 77 (166)
T d1b0aa1 15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH----------------- 77 (166)
T ss_dssp SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH-----------------
T ss_pred CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH-----------------
Confidence 4678888888888877665568999999997 7899999999999999998776554333222
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
...+|+++-++|.+..+. .+.++++..++++|..
T Consensus 78 ----~~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 78 ----VENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN 111 (166)
T ss_dssp ----HHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred ----HhhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence 223789999999877543 3467899999999864
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=96.54 E-value=0.0011 Score=55.07 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=62.6
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---HcC-CcEE-ecCCCHHHHHHhc-CCcc
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLG-ADSF-LVSRDQDEMQAAM-GTMD 249 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~---~~g-~~~v-~~~~~~~~~~~~~-~g~d 249 (361)
..+++||++||=.|+|. |.++..+|+..| .+|+.++.+++....+.+ +++ ...+ +...+.. .... ..+|
T Consensus 80 ~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~--~~~~~~~fD 156 (250)
T d1yb2a1 80 RCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIA--DFISDQMYD 156 (250)
T ss_dssp -CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTT--TCCCSCCEE
T ss_pred HcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeee--cccccceee
Confidence 45689999999998754 666777888754 489999988775544432 333 2222 1122211 1122 3689
Q ss_pred EEEEcCCC-cccHHHHHHhhccCCEEEEe
Q 018094 250 GIIDTVSA-VHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 250 ~vid~~g~-~~~~~~~~~~l~~~G~~v~~ 277 (361)
.||--... ...+..+.+.|+|||+++.+
T Consensus 157 ~V~ld~p~p~~~l~~~~~~LKpGG~lv~~ 185 (250)
T d1yb2a1 157 AVIADIPDPWNHVQKIASMMKPGSVATFY 185 (250)
T ss_dssp EEEECCSCGGGSHHHHHHTEEEEEEEEEE
T ss_pred eeeecCCchHHHHHHHHHhcCCCceEEEE
Confidence 88754444 34588999999999999876
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.52 E-value=0.011 Score=48.97 Aligned_cols=126 Identities=19% Similarity=0.232 Sum_probs=71.1
Q ss_pred CceEECCCCCCcccccccchhhhhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---
Q 018094 147 HFVVRIPEGTPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA--- 223 (361)
Q Consensus 147 ~~v~~iP~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~--- 223 (361)
...+.+.+++.+....--. +.+ +...+... .++|++||=+|+|. |.+++.+++ +|++|+.++.+++....+
T Consensus 88 ~~~i~i~pg~aFGTG~H~T-T~l-~l~~l~~~--~~~g~~VLDiGcGs-G~l~i~aa~-~g~~V~gvDis~~av~~A~~n 161 (254)
T d2nxca1 88 EIPLVIEPGMAFGTGHHET-TRL-ALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEAN 161 (254)
T ss_dssp SEEEECCCC-----CCSHH-HHH-HHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHH
T ss_pred ceEEEEccccccCccccch-hhH-HHHHHHhh--cCccCEEEEcccch-hHHHHHHHh-cCCEEEEEECChHHHHHHHHH
Confidence 4567777777665443111 111 12334433 47999999999753 555655554 689999999888765333
Q ss_pred HHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---cHHHHHHhhccCCEEEEecC
Q 018094 224 IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 224 ~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~ 279 (361)
++..|.+..+...+.... ...+.||+|+....... .+....+.|+|+|++++.|.
T Consensus 162 a~~n~~~~~~~~~d~~~~-~~~~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi 219 (254)
T d2nxca1 162 AKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp HHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHcCCceeEEecccccc-ccccccchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 234454332222332221 12357999997654432 23456778999999997653
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=96.46 E-value=0.0029 Score=47.03 Aligned_cols=73 Identities=19% Similarity=0.327 Sum_probs=54.6
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHh-cCCccEEEEcCCCcc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAA-MGTMDGIIDTVSAVH 259 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~-~~g~d~vid~~g~~~ 259 (361)
+++|.|.|.+|+..++.+...|.+|++++.++++..++ ++.+...++ |..+++.+.++ ...+|.+|-+++...
T Consensus 2 ~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~-~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~ 76 (134)
T d2hmva1 2 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 76 (134)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHT-TTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHH-HHhCCcceeeecccchhhhccCCccccEEEEEcCchH
Confidence 47888999999999999999999999999998887666 455654433 33444555444 246898888887653
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.46 E-value=0.02 Score=43.91 Aligned_cols=87 Identities=23% Similarity=0.158 Sum_probs=57.8
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC-cEEecCCCHHHHHHhcCCccEEEEcCCCcc---cH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PL 261 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~g~d~vid~~g~~~---~~ 261 (361)
+|.|+|.|.+|...+..++..|.+|++.++++++..++ ++.|. +...+ +. +.....|+||-++.... .+
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a-~~~~~~~~~~~--~~----~~~~~~DiIilavp~~~~~~vl 74 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAGQ--DL----SLLQTAKIIFLCTPIQLILPTL 74 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEES--CG----GGGTTCSEEEECSCHHHHHHHH
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHH-HHhhccceeee--ec----ccccccccccccCcHhhhhhhh
Confidence 57889999999999988999999999998887766554 66774 33322 11 12346888888876443 12
Q ss_pred HHHHHhhccCCEEEEecC
Q 018094 262 MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~ 279 (361)
+.....++++-.++.++.
T Consensus 75 ~~l~~~l~~~~iv~~~~s 92 (165)
T d2f1ka2 75 EKLIPHLSPTAIVTDVAS 92 (165)
T ss_dssp HHHGGGSCTTCEEEECCS
T ss_pred hhhhhhcccccceeeccc
Confidence 233334455566666653
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=96.42 E-value=0.011 Score=46.12 Aligned_cols=36 Identities=28% Similarity=0.291 Sum_probs=33.0
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
..+++|+|+|+|+.|+.|+..|...|.+|++....+
T Consensus 41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccC
Confidence 567889999999999999999999999999999764
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.41 E-value=0.024 Score=42.72 Aligned_cols=93 Identities=16% Similarity=0.284 Sum_probs=66.9
Q ss_pred CEEEEEcc-chHHHHHHHHHHHC--CCeEEEEeCC--chhHHHHHHHcCCcEEecCCCH--HH-----------------
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAM--GVKVTVISTS--PSKKSEAIERLGADSFLVSRDQ--DE----------------- 240 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~--g~~Vi~~~~~--~~~~~~~~~~~g~~~v~~~~~~--~~----------------- 240 (361)
++|.|+|+ |.+|.-+.++.+.. ..+|+..+-+ -+...+.+++|.+..++-.... +.
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~ 82 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD 82 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence 68999998 99999999999986 3577666544 3456677788988776543321 11
Q ss_pred -HHHh-cCCccEEEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 241 -MQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 241 -~~~~-~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
+.++ ...+|+++.++.+...+...+.+++.+-++.+.
T Consensus 83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA 121 (150)
T d1r0ka2 83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA 121 (150)
T ss_dssp HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence 1111 125899999988888888899888888776554
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.35 E-value=0.012 Score=44.53 Aligned_cols=82 Identities=18% Similarity=0.287 Sum_probs=57.5
Q ss_pred EEEEEccchHHHHHHH-HHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 186 HVGVVGLGGLGHVAVK-FAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~-la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
+|.++|+|.+|.+.++ +++.-+.++++.+++.++..++.+++|.... +..+ . ....|+||=++--.. +...
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~--~----v~~~Div~lavkP~~-~~~v 73 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP--E----LHSDDVLILAVKPQD-MEAA 73 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC--C----CCTTSEEEECSCHHH-HHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc--c----ccccceEEEecCHHH-HHHh
Confidence 5788999999998777 5555557999999999988888788886533 2111 1 134799998876433 6666
Q ss_pred HHhhccCCEEE
Q 018094 265 IGLLKSQGKLV 275 (361)
Q Consensus 265 ~~~l~~~G~~v 275 (361)
++-+++.++++
T Consensus 74 ~~~l~~~~~~v 84 (152)
T d1yqga2 74 CKNIRTNGALV 84 (152)
T ss_dssp HTTCCCTTCEE
T ss_pred HHHHhhcccEE
Confidence 66666665544
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.34 E-value=0.0097 Score=48.36 Aligned_cols=100 Identities=24% Similarity=0.294 Sum_probs=60.3
Q ss_pred CCCCCCEEEEEcc--chHHHHHHHHHHHCC----CeEEEEeCCchhHHHHHHH--------cCCcEE-ecCCCHHHHHHh
Q 018094 180 LDKPGMHVGVVGL--GGLGHVAVKFAKAMG----VKVTVISTSPSKKSEAIER--------LGADSF-LVSRDQDEMQAA 244 (361)
Q Consensus 180 ~~~~g~~VlI~Ga--g~vG~~a~~la~~~g----~~Vi~~~~~~~~~~~~~~~--------~g~~~v-~~~~~~~~~~~~ 244 (361)
.+++|++||.+|+ |-......+++...| .+|+.+...++-...+.+. ++...+ +...+.......
T Consensus 77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~~~ 156 (223)
T d1r18a_ 77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPP 156 (223)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGG
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccccc
Confidence 5899999999986 333344444444444 3899888876533222111 122112 222221111111
Q ss_pred cCCccEEEEcCCCcccHHHHHHhhccCCEEEE-ecC
Q 018094 245 MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVL-VGA 279 (361)
Q Consensus 245 ~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~-~g~ 279 (361)
.+.||.|+-+.+........++.|++||+++. +|.
T Consensus 157 ~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~pvg~ 192 (223)
T d1r18a_ 157 NAPYNAIHVGAAAPDTPTELINQLASGGRLIVPVGP 192 (223)
T ss_dssp GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEEESC
T ss_pred ccceeeEEEEeechhchHHHHHhcCCCcEEEEEEec
Confidence 24799999988887767888999999999986 453
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=96.25 E-value=0.022 Score=43.58 Aligned_cols=89 Identities=21% Similarity=0.258 Sum_probs=61.8
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH-
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 264 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~- 264 (361)
+|-|+|.|.+|...+.-+...|.+|++.++++++..++ ++.+... ..+. .+.....|+||-|+......+..
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~-~~~~~~~---~~~~---~e~~~~~d~ii~~v~~~~~v~~v~ 74 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV-IAAGAET---ASTA---KAIAEQCDVIITMLPNSPHVKEVA 74 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE---CSSH---HHHHHHCSEEEECCSSHHHHHHHH
T ss_pred EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHH-HHhhhhh---cccH---HHHHhCCCeEEEEcCCHHHHHHHH
Confidence 47788999999999988888999999999998887766 4556532 1122 22233589999998776544432
Q ss_pred ------HHhhccCCEEEEecCCC
Q 018094 265 ------IGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 265 ------~~~l~~~G~~v~~g~~~ 281 (361)
+..++++..+++++...
T Consensus 75 ~~~~~~~~~~~~g~iiid~sT~~ 97 (161)
T d1vpda2 75 LGENGIIEGAKPGTVLIDMSSIA 97 (161)
T ss_dssp HSTTCHHHHCCTTCEEEECSCCC
T ss_pred hCCcchhhccCCCCEEEECCCCC
Confidence 33456677777776543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=96.18 E-value=0.012 Score=49.21 Aligned_cols=77 Identities=14% Similarity=0.187 Sum_probs=51.9
Q ss_pred CCCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHcCCcE--EecCCCHHHHH-------HhcC
Q 018094 182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERLGADS--FLVSRDQDEMQ-------AAMG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~-------~~~~ 246 (361)
-+|+++||.|+ | ++|.+.++.+...|++|+++.++++ +..++.++.+... ..+..+++... +..+
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 36899999996 5 6999999999999999999998864 2333333333222 22334433222 2235
Q ss_pred CccEEEEcCCCc
Q 018094 247 TMDGIIDTVSAV 258 (361)
Q Consensus 247 g~d~vid~~g~~ 258 (361)
.+|+++.+.|..
T Consensus 83 ~id~lV~nag~~ 94 (274)
T d2pd4a1 83 SLDFIVHSVAFA 94 (274)
T ss_dssp CEEEEEECCCCC
T ss_pred CCCeEEeecccc
Confidence 799999988863
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.15 E-value=0.019 Score=44.18 Aligned_cols=97 Identities=14% Similarity=0.109 Sum_probs=74.5
Q ss_pred ccccchhhhhhhHHHHhhCCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH
Q 018094 161 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD 239 (361)
Q Consensus 161 aa~l~~~~~~a~~~l~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 239 (361)
-+.+||+..+.+..+++..---.|++|+|+|. ..+|.-.+.++...|++|++..+......+
T Consensus 16 ~~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~----------------- 78 (170)
T d1a4ia1 16 DCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE----------------- 78 (170)
T ss_dssp SCCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH-----------------
T ss_pred CCCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH-----------------
Confidence 35678888888888887765568999999997 789999999999999999987765543322
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCC
Q 018094 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 280 (361)
....+|+++-++|.+..+. .+.++++-.++++|..
T Consensus 79 ----~~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~ 113 (170)
T d1a4ia1 79 ----EVNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN 113 (170)
T ss_dssp ----HHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred ----HHhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence 2234788888888876443 3468888888888853
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.15 E-value=0.0089 Score=47.39 Aligned_cols=90 Identities=20% Similarity=0.192 Sum_probs=62.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc-c
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-P 260 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-~ 260 (361)
-.|++|.|+|.|.+|...+++++.+|++|+..++....... ...+... ..+.+ ++....|+|.-+..... +
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~~~~~~~---~~~l~---~ll~~sD~i~~~~plt~~T 118 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--RALGLQR---VSTLQ---DLLFHSDCVTLHCGLNEHN 118 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--HHHTCEE---CSSHH---HHHHHCSEEEECCCCCTTC
T ss_pred eeCceEEEeccccccccceeeeeccccceeeccCcccccch--hhhcccc---ccchh---hccccCCEEEEeecccccc
Confidence 36889999999999999999999999999999876544222 3444422 12222 22334788877655322 1
Q ss_pred ----HHHHHHhhccCCEEEEecC
Q 018094 261 ----LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ----~~~~~~~l~~~G~~v~~g~ 279 (361)
-...++.|+++..+++++.
T Consensus 119 ~~li~~~~l~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 119 HHLINDFTVKQMRQGAFLVNTAR 141 (193)
T ss_dssp TTSBSHHHHTTSCTTEEEEECSC
T ss_pred hhhhhHHHHhccCCCCeEEecCC
Confidence 2356778899998888875
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.15 E-value=0.011 Score=50.04 Aligned_cols=102 Identities=14% Similarity=0.081 Sum_probs=66.3
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHcCCcEE--ecCCCHHHHHHhcC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE---AIERLGADSF--LVSRDQDEMQAAMG 246 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~v--~~~~~~~~~~~~~~ 246 (361)
+.-+-....+++|++||=+|+|-=| .+..+|+..|++|+.++.+.+.... .+++.|.... +...+. ....+
T Consensus 50 ~~~~~~~l~l~~G~~VLDiGCG~G~-~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~---~~~~~ 125 (291)
T d1kpia_ 50 RKLALDKLNLEPGMTLLDIGCGWGS-TMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGW---EEFDE 125 (291)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSH-HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCG---GGCCC
T ss_pred HHHHHHhcCCCCCCEEEEecCcchH-HHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcc---ccccc
Confidence 4445556678999999999985333 4678888889999999988775322 2344554321 112221 12235
Q ss_pred CccEEEEcCCCcc---------------cHHHHHHhhccCCEEEEe
Q 018094 247 TMDGIIDTVSAVH---------------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 247 g~d~vid~~g~~~---------------~~~~~~~~l~~~G~~v~~ 277 (361)
.||.|+..-.-++ .++.+.+.|+|+|+++.-
T Consensus 126 ~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~ 171 (291)
T d1kpia_ 126 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 171 (291)
T ss_dssp CCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEE
T ss_pred ccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEE
Confidence 7998876433322 356688999999999854
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.11 E-value=0.01 Score=47.16 Aligned_cols=87 Identities=24% Similarity=0.236 Sum_probs=61.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.+|.|+|.|.+|...+++++.+|++|++.++....... ..+. ...+ +.++....|+++-++....
T Consensus 42 ~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~---~~~~----~~~~---l~~~l~~sDii~~~~plt~~T~ 111 (197)
T d1j4aa1 42 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE---KKGY----YVDS---LDDLYKQADVISLHVPDVPANV 111 (197)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HTTC----BCSC---HHHHHHHCSEEEECSCCCGGGT
T ss_pred cCCeEEEecccccchhHHHhHhhhcccccccCcccccccc---ccee----eecc---ccccccccccccccCCcccccc
Confidence 4889999999999999999999999999999876543221 1121 1122 2233335799888765322
Q ss_pred --cHHHHHHhhccCCEEEEecC
Q 018094 260 --PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~ 279 (361)
.-...++.|+++..+|.++.
T Consensus 112 ~li~~~~l~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 112 HMINDESIAKMKQDVVIVNVSR 133 (197)
T ss_dssp TCBSHHHHHHSCTTEEEEECSC
T ss_pred ccccHHHHhhhCCccEEEecCc
Confidence 12467888999999998865
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.11 E-value=0.0087 Score=50.66 Aligned_cols=95 Identities=18% Similarity=0.187 Sum_probs=58.9
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEE---eCCch---hHHHHHHHcC---CcE---EecCCCHHHHHHhc-----CC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVI---STSPS---KKSEAIERLG---ADS---FLVSRDQDEMQAAM-----GT 247 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~---~~~~~---~~~~~~~~~g---~~~---v~~~~~~~~~~~~~-----~g 247 (361)
.|||.|+ +++|.+.+..+...|++|+.+ .++.+ +..+.++++. ... ..|..+.+.+.++. +.
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~ 83 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR 83 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence 4567787 999999999999999875544 33333 2333444443 221 24556655544432 36
Q ss_pred ccEEEEcCCCcc-------------------------cHHHHHHhh--ccCCEEEEecCC
Q 018094 248 MDGIIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLVGAP 280 (361)
Q Consensus 248 ~d~vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~ 280 (361)
.|++++++|... ..+.++..| +.+|+++.+++.
T Consensus 84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~ 143 (285)
T d1jtva_ 84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV 143 (285)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence 999999987643 123344555 346899998753
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.08 E-value=0.0073 Score=43.23 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=55.0
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcC--CccEEEEcCCCccc
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMG--TMDGIIDTVSAVHP 260 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~--g~d~vid~~g~~~~ 260 (361)
+.+|.|+|+|.+|++.++-|+.+|.++++.+.+++.- . .++....+ .++.+.+.+.+... ++|+|- .-.++.
T Consensus 11 ~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~P--A-~~va~~~i~~~~~d~~~l~~~~~~~~~DviT--~E~EnI 85 (111)
T d1kjqa2 11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAP--A-MHVAHRSHVINMLDGDALRRVVELEKPHYIV--PEIEAI 85 (111)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCG--G-GGGSSEEEECCTTCHHHHHHHHHHHCCSEEE--ECSSCS
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCc--h-hhcCCeEEECCCCCHHHHHHHHHhhCCceEE--EEecCc
Confidence 3569999999999999999999999999999876532 1 23333333 35667777666543 678872 222222
Q ss_pred HHHHHHhhccCC
Q 018094 261 LMPLIGLLKSQG 272 (361)
Q Consensus 261 ~~~~~~~l~~~G 272 (361)
-...++.+...|
T Consensus 86 ~~~~L~~le~~g 97 (111)
T d1kjqa2 86 ATDMLIQLEEEG 97 (111)
T ss_dssp CHHHHHHHHHTT
T ss_pred CHHHHHHHHHCC
Confidence 234555554444
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.06 E-value=0.0046 Score=48.79 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=60.5
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE---------ecCC-------C-HHHHH
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF---------LVSR-------D-QDEMQ 242 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v---------~~~~-------~-~~~~~ 242 (361)
.+.+|++||.+|+| .|..+..+|+. |.+|+.++-++.....+.++.+.... .... + .+...
T Consensus 17 ~~~~~~rvLd~GCG-~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 94 (201)
T d1pjza_ 17 NVVPGARVLVPLCG-KSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 94 (201)
T ss_dssp CCCTTCEEEETTTC-CSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred CCCCCCEEEEecCc-CCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc
Confidence 47899999999985 35677788865 99999999998776555333332110 0000 0 01011
Q ss_pred HhcCCccEEEEcCCCcc--------cHHHHHHhhccCCEEEEec
Q 018094 243 AAMGTMDGIIDTVSAVH--------PLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 243 ~~~~g~d~vid~~g~~~--------~~~~~~~~l~~~G~~v~~g 278 (361)
.....+|.|++...-.. .+....+.|+++|+++...
T Consensus 95 ~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~ 138 (201)
T d1pjza_ 95 RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 138 (201)
T ss_dssp HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred ccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence 11236899988644322 2456788899999987653
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.04 E-value=0.013 Score=46.12 Aligned_cols=90 Identities=21% Similarity=0.203 Sum_probs=63.8
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc--
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~-- 259 (361)
-.+.++.|+|.|.+|...+++++.+|.+|++.++...+... ...+... .+ +.++....|+|.-+..-..
T Consensus 42 l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~--~~~~~~~----~~---l~ell~~sDiv~~~~Plt~~T 112 (184)
T d1ygya1 42 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARA--AQLGIEL----LS---LDDLLARADFISVHLPKTPET 112 (184)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHH--HHHTCEE----CC---HHHHHHHCSEEEECCCCSTTT
T ss_pred ccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHH--hhcCcee----cc---HHHHHhhCCEEEEcCCCCchh
Confidence 36789999999999999999999999999999877654322 3444432 12 2233335799888755432
Q ss_pred --c-HHHHHHhhccCCEEEEecCC
Q 018094 260 --P-LMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 260 --~-~~~~~~~l~~~G~~v~~g~~ 280 (361)
. -...++.|+++..+|.++..
T Consensus 113 ~~lin~~~l~~mk~~a~lIN~sRG 136 (184)
T d1ygya1 113 AGLIDKEALAKTKPGVIIVNAARG 136 (184)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSCT
T ss_pred hhhhhHHHHhhhCCCceEEEecch
Confidence 1 23678889999999999753
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=96.01 E-value=0.009 Score=49.97 Aligned_cols=100 Identities=20% Similarity=0.227 Sum_probs=67.0
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHH---HHHcCC-cEE-ecCCCHHHHHHhc-C
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEA---IERLGA-DSF-LVSRDQDEMQAAM-G 246 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~---~~~~g~-~~v-~~~~~~~~~~~~~-~ 246 (361)
+-...++++|++||=.|+|. |.+++.+|+..+ .+|+.++.+++....+ .+++|. +.+ +...+.. .... .
T Consensus 95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~--~~~~~~ 171 (266)
T d1o54a_ 95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS--EGFDEK 171 (266)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG--GCCSCC
T ss_pred HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecccc--cccccc
Confidence 33456689999999999864 677778898875 5899999988754333 344564 222 2222211 1111 2
Q ss_pred CccEEEEcCCCc-ccHHHHHHhhccCCEEEEe
Q 018094 247 TMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 247 g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~ 277 (361)
.+|.||--...+ ..+..+.+.|+|||+++.+
T Consensus 172 ~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~ 203 (266)
T d1o54a_ 172 DVDALFLDVPDPWNYIDKCWEALKGGGRFATV 203 (266)
T ss_dssp SEEEEEECCSCGGGTHHHHHHHEEEEEEEEEE
T ss_pred ceeeeEecCCCHHHHHHHHHhhcCCCCEEEEE
Confidence 588777655554 4678999999999999876
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=95.99 E-value=0.0092 Score=49.77 Aligned_cols=77 Identities=16% Similarity=0.307 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHcCCcE---EecCCCHHH-------HHHhc-
Q 018094 181 DKPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKK-SEAIERLGADS---FLVSRDQDE-------MQAAM- 245 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~~~-~~~~~~~g~~~---v~~~~~~~~-------~~~~~- 245 (361)
+-.|+++||.|+ | ++|.+.++.+...|++|+++.++.++. .++.++++... ..|..+++. +.+..
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 347899999995 4 599999999999999999999888765 34545566422 234444322 22211
Q ss_pred --CCccEEEEcCCC
Q 018094 246 --GTMDGIIDTVSA 257 (361)
Q Consensus 246 --~g~d~vid~~g~ 257 (361)
+..|+++.++|.
T Consensus 83 ~~~~ld~~i~~ag~ 96 (268)
T d2h7ma1 83 AGNKLDGVVHSIGF 96 (268)
T ss_dssp TTCCEEEEEECCCC
T ss_pred cCCCcceeeecccc
Confidence 368999999884
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.93 E-value=0.058 Score=41.56 Aligned_cols=97 Identities=16% Similarity=0.191 Sum_probs=64.9
Q ss_pred EEEEEccchHHHHHHHHHHHCC-CeEEEEeCCch-hHHHHHHHcCCcEEecCCC-HH-----------HHHHhcCCccEE
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPS-KKSEAIERLGADSFLVSRD-QD-----------EMQAAMGTMDGI 251 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~-~~~~~~~~~g~~~v~~~~~-~~-----------~~~~~~~g~d~v 251 (361)
+|.|.|-|.+|...+..+.... .+++.+..... .....+.+.+.+......+ .. .+.++..++|+|
T Consensus 4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDvV 83 (172)
T d2czca2 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDII 83 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCCEE
Confidence 5889999999998888776554 57777765332 2233345556543322111 11 122223479999
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEecCCCC
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPEK 282 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 282 (361)
+||+|.-.+.+.+...+..|-+.|.++.+..
T Consensus 84 iEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~ 114 (172)
T d2czca2 84 VDATPGGIGAKNKPLYEKAGVKAIFQGGEKA 114 (172)
T ss_dssp EECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred EECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence 9999998777788888999999999987643
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=95.90 E-value=0.056 Score=41.31 Aligned_cols=133 Identities=12% Similarity=0.119 Sum_probs=80.8
Q ss_pred EEEEEccchHHHH-HHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 186 ~VlI~Gag~vG~~-a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+|.|+|+|.+|.. .+..++.. +.+++++++++++...+.++++...+++ +.+.+ +...+|+|+-++....-...
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~~l--l~~~iD~V~I~tp~~~H~~~ 78 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT--DYRDV--LQYGVDAVMIHAATDVHSTL 78 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS--STTGG--GGGCCSEEEECSCGGGHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc--cHHHh--cccccceecccccccccccc
Confidence 5788999999964 56666655 5588877777778888888888754432 21221 12369999999887765667
Q ss_pred HHHhhccCCEEEEecCCCCCccc---ChHHH-hhCCcEE-EecccCCHHHHHHHHHHHHcCCCcee
Q 018094 264 LIGLLKSQGKLVLVGAPEKPLEL---PAFSL-LMGRKIV-GGSMIGGMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~~~~---~~~~~-~~~~~~i-~g~~~~~~~~~~~~~~~l~~~~l~~~ 324 (361)
+..++..+ .-+.+.-+-....- ....+ -.++..+ .++ ......+..+++.+..|++...
T Consensus 79 ~~~al~~g-k~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~-~r~~~~~~~~~~~~~~G~ig~~ 142 (167)
T d1xeaa1 79 AAFFLHLG-IPTFVDKPLAASAQECENLYELAEKHHQPLYVGF-NGFDAMVQDWLQVAAAGKLPTH 142 (167)
T ss_dssp HHHHHHTT-CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC-GTHHHHHHHHHHHHHHTCCCHH
T ss_pred cccccccc-cccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe-CcCCHHHHHHHHHhhcCCCCcE
Confidence 77777765 44666433221111 11111 2233333 444 3334557778888888877643
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.88 E-value=0.016 Score=45.42 Aligned_cols=84 Identities=24% Similarity=0.381 Sum_probs=61.7
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|++|.|+|.|.+|...+++++.+|++|++.++.... +..... +.+.++....|+|+-++.-..
T Consensus 41 ~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~-----~~l~ell~~sDiv~~~~pl~~~t~ 107 (181)
T d1qp8a1 41 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT-----NSLEEALREARAAVCALPLNKHTR 107 (181)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB-----SCSHHHHTTCSEEEECCCCSTTTT
T ss_pred cCceEEEeccccccccceeeeeccccccccccccccc--------cceeee-----echhhhhhccchhhcccccccccc
Confidence 5889999999999999999999999999999876432 111111 123455567899998764421
Q ss_pred --cHHHHHHhhccCCEEEEecC
Q 018094 260 --PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~ 279 (361)
.-...++.|+++..+|++|.
T Consensus 108 ~li~~~~l~~mk~~ailIN~~R 129 (181)
T d1qp8a1 108 GLVKYQHLALMAEDAVFVNVGR 129 (181)
T ss_dssp TCBCHHHHTTSCTTCEEEECSC
T ss_pred cccccceeeeccccceEEeccc
Confidence 12568888999999999974
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.87 E-value=0.011 Score=49.97 Aligned_cols=102 Identities=18% Similarity=0.099 Sum_probs=65.4
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HHcCCc-E-EecCCCHHHHHHhcC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAI---ERLGAD-S-FLVSRDQDEMQAAMG 246 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~---~~~g~~-~-v~~~~~~~~~~~~~~ 246 (361)
...+-...++++|++||=+|+| .|..++.+|+..|++|+.++.+.+....+. ++.|.. . .+...+. ..+.+
T Consensus 51 ~~~~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~ 126 (285)
T d1kpga_ 51 IDLALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFDE 126 (285)
T ss_dssp HHHHHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCCC
T ss_pred HHHHHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh---hcccc
Confidence 3445556668999999999985 345677788888999999999987654332 233421 1 1222221 22345
Q ss_pred CccEEEEcCCCcc--------cHHHHHHhhccCCEEEEe
Q 018094 247 TMDGIIDTVSAVH--------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 247 g~d~vid~~g~~~--------~~~~~~~~l~~~G~~v~~ 277 (361)
.+|.|+..-.-++ .+..+.+.|+|+|++++-
T Consensus 127 ~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~ 165 (285)
T d1kpga_ 127 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH 165 (285)
T ss_dssp CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred cccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence 6888765322222 356688899999999853
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.84 E-value=0.012 Score=47.60 Aligned_cols=71 Identities=25% Similarity=0.203 Sum_probs=50.6
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
.+|||.|+ |.+|...+..+...|. .|+...++.++...+ .-+.+.+ .|..+.+...+...++|.|+.+++.
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--cCCcEEEEeeeccccccccccccceeeEEEEee
Confidence 57999997 9999999999998886 466666766544322 1233332 3455666777777899999998765
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.83 E-value=0.007 Score=45.90 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=31.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
-.|++|||+|+|.+|..-+..+...|++|+++...
T Consensus 11 l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36899999999999999999999999999999653
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=95.79 E-value=0.012 Score=48.29 Aligned_cols=104 Identities=22% Similarity=0.229 Sum_probs=66.5
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcCCcE--EecCCCHHHHHHhcC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS---EAIERLGADS--FLVSRDQDEMQAAMG 246 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~---~~~~~~g~~~--v~~~~~~~~~~~~~~ 246 (361)
+..+....++++|++||=+|+|. |..+..+++..|++|+.++.++.... +.+++.|... -+...+.... ...+
T Consensus 22 ~~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~ 99 (245)
T d1nkva_ 22 YATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANE 99 (245)
T ss_dssp HHHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSS
T ss_pred HHHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccC
Confidence 44566777899999999999753 34566788888999999998876432 2234456431 1222221111 1134
Q ss_pred CccEEEEcCCC------cccHHHHHHhhccCCEEEEe
Q 018094 247 TMDGIIDTVSA------VHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 247 g~d~vid~~g~------~~~~~~~~~~l~~~G~~v~~ 277 (361)
.||+|+-.-.. ...+..+.+.|+|+|+++..
T Consensus 100 ~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~ 136 (245)
T d1nkva_ 100 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIG 136 (245)
T ss_dssp CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred ceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEE
Confidence 79998854222 23466788899999999875
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.78 E-value=0.054 Score=42.02 Aligned_cols=96 Identities=16% Similarity=0.185 Sum_probs=61.5
Q ss_pred EEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchh-HHHHHHHcCCcEEecCCCHHH-----------HHHhcCCccEEE
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSK-KSEAIERLGADSFLVSRDQDE-----------MQAAMGTMDGII 252 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~-----------~~~~~~g~d~vi 252 (361)
+|.|.|-|.+|+..+..+.... .+++.+...... ......+.+............ +.+...++|+|+
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiVi 82 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV 82 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEE
Confidence 5789999999999999988764 588888765432 223333334332221111111 112223689999
Q ss_pred EcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 253 DTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 253 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
||+|.-...+.+...++.+-+++..+...
T Consensus 83 ecTG~f~~~e~a~~hl~~G~KvIi~~~~~ 111 (178)
T d1b7go1 83 DTTPNGVGAQYKPIYLQLQRNAIFQGGEK 111 (178)
T ss_dssp ECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred ECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence 99998766777777888777888876543
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.77 E-value=0.011 Score=48.06 Aligned_cols=99 Identities=18% Similarity=0.063 Sum_probs=63.0
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe------------c---------CCC
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL------------V---------SRD 237 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~------------~---------~~~ 237 (361)
..++++.+||..|+|. |..+..+|+ .|++|+.++-++.....+.++.+..... . ..+
T Consensus 41 l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d 118 (229)
T d2bzga1 41 LKGKSGLRVFFPLCGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCS 118 (229)
T ss_dssp HTTCCSCEEEETTCTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCCEEEEeCCCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcc
Confidence 3457889999999864 677777776 6999999999988776654544422110 0 001
Q ss_pred HHHH-HHhcCCccEEEEcCCCcc--------cHHHHHHhhccCCEEEEecC
Q 018094 238 QDEM-QAAMGTMDGIIDTVSAVH--------PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 238 ~~~~-~~~~~g~d~vid~~g~~~--------~~~~~~~~l~~~G~~v~~g~ 279 (361)
...+ ....+.+|+|+++.--.+ .+....++|+|+|+++....
T Consensus 119 ~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~ 169 (229)
T d2bzga1 119 IFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL 169 (229)
T ss_dssp GGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence 0011 111236899998754321 24567889999999876654
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=95.75 E-value=0.034 Score=45.03 Aligned_cols=72 Identities=24% Similarity=0.252 Sum_probs=54.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
-.|.+|+|.|-|.+|..+++++...|+++++++.+..+...+..+.|.+.+ +. +. ...-.+|+.+=|+-+..
T Consensus 37 l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~~~-~~---~~--~~~~~cDIl~PcA~~~~ 108 (230)
T d1leha1 37 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-AP---NA--IYGVTCDIFAPCALGAV 108 (230)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CG---GG--TTTCCCSEEEECSCSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCccc-CC---cc--cccccccEecccccccc
Confidence 368999999999999999999999999999999888887777777776543 11 11 12236777777766544
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=95.74 E-value=0.013 Score=49.28 Aligned_cols=103 Identities=16% Similarity=0.191 Sum_probs=64.8
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCc--EEecCCCHHHHHHhcCCcc
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD--SFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~--~v~~~~~~~~~~~~~~g~d 249 (361)
+.....++++++||=+|+| .|..+..+++..|++|+.++.++.....+ .++.|.. .-+...+...+....+.||
T Consensus 59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD 137 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYD 137 (282)
T ss_dssp HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4555678999999999986 45566778887799999999887643222 2334432 1122222111111123699
Q ss_pred EEEEcCCCc------ccHHHHHHhhccCCEEEEec
Q 018094 250 GIIDTVSAV------HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 250 ~vid~~g~~------~~~~~~~~~l~~~G~~v~~g 278 (361)
+|+-.-.-. ..+..+.+.|+|+|+++...
T Consensus 138 ~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~ 172 (282)
T d2o57a1 138 FIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD 172 (282)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence 998643322 23567888999999988764
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.72 E-value=0.087 Score=40.01 Aligned_cols=89 Identities=17% Similarity=0.204 Sum_probs=58.9
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH-
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 264 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~- 264 (361)
+|-++|.|.+|...+.-+...|.+|++.+++.++...+ ++.+.... . ...+.....|+++-|+......+..
T Consensus 3 kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~-~~~~~~~~---~---~~~e~~~~~diii~~v~~~~~~~~v~ 75 (162)
T d3cuma2 3 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-VAAGASAA---R---SARDAVQGADVVISMLPASQHVEGLY 75 (162)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEEC---S---SHHHHHTSCSEEEECCSCHHHHHHHH
T ss_pred EEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhh-hhhhcccc---c---hhhhhccccCeeeecccchhhHHHHH
Confidence 58889999999988888888899999999998877665 45554321 1 1223334577887777765533332
Q ss_pred ------HHhhccCCEEEEecCCC
Q 018094 265 ------IGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 265 ------~~~l~~~G~~v~~g~~~ 281 (361)
...+.++-.++.++...
T Consensus 76 ~~~~~~~~~l~~g~iiid~st~~ 98 (162)
T d3cuma2 76 LDDDGLLAHIAPGTLVLECSTIA 98 (162)
T ss_dssp HSTTCHHHHSCTTCEEEECSCCC
T ss_pred hccccccccCCCCCEEEECCCCC
Confidence 23355566666665443
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=95.66 E-value=0.0076 Score=48.97 Aligned_cols=100 Identities=24% Similarity=0.188 Sum_probs=63.4
Q ss_pred HhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcE--EecCCCHHHHHHhcCCccE
Q 018094 176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADS--FLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~--v~~~~~~~~~~~~~~g~d~ 250 (361)
.....++++++||=+|+| .|..+..+++. |.+|+.++.+++....+ .++.+... ++..+. ..+.-..+.||+
T Consensus 8 l~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~-~~l~~~~~~fD~ 84 (231)
T d1vl5a_ 8 MQIAALKGNEEVLDVATG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQMPFTDERFHI 84 (231)
T ss_dssp HHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEEE
T ss_pred HHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhccccccccccccccccc-cccccccccccc
Confidence 344668999999999986 56666666654 78999999887654332 23345432 222211 111111246999
Q ss_pred EEEcCCCc------ccHHHHHHhhccCCEEEEec
Q 018094 251 IIDTVSAV------HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~g~~------~~~~~~~~~l~~~G~~v~~g 278 (361)
|+-...-. ..+..+.+.|+|||+++..-
T Consensus 85 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 118 (231)
T d1vl5a_ 85 VTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 118 (231)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 98764432 24677899999999998763
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=95.57 E-value=0.095 Score=40.25 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=62.6
Q ss_pred EEEEEccchHHHHHHHHHHHCC-CeEEEEeCCch-hHHHHHHHcCCcEEecCCCHH------------HHHHhcCCccEE
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPS-KKSEAIERLGADSFLVSRDQD------------EMQAAMGTMDGI 251 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~-~~~~~~~~~g~~~v~~~~~~~------------~~~~~~~g~d~v 251 (361)
+|.|.|-|.+|.....++...+ .+++.+..... .....+.+++.+......+.. ...++..++|+|
T Consensus 3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDvV 82 (171)
T d1cf2o1 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADIV 82 (171)
T ss_dssp EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSEE
T ss_pred EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCCCEE
Confidence 5889999999999999887665 47777765432 222233455544322222111 112222479999
Q ss_pred EEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 252 IDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 252 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+||+|.-.+...+...+..+-+++..+...
T Consensus 83 iEcTG~f~~~~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 83 IDCTPEGIGAKNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp EECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred EEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 999999776677778888888888887654
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=95.55 E-value=0.064 Score=41.11 Aligned_cols=132 Identities=14% Similarity=0.223 Sum_probs=80.6
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHH---cC---Cc------E-Ee--------cCCCHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAIER---LG---AD------S-FL--------VSRDQDEM 241 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~---~~~~~~~~~---~g---~~------~-v~--------~~~~~~~~ 241 (361)
+|-|.|=|.+|+.+...+...+.+++.+.... +....+.+. .| .+ . ++ ...+++.+
T Consensus 2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~i 81 (169)
T d1dssg1 2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPENI 81 (169)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGGC
T ss_pred eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHHC
Confidence 47889999999999998887788888887642 223333321 11 11 0 11 11222333
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-c----cChHHHhhCCcEEEecccCCHHHHHHHHHHH
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-E----LPAFSLLMGRKIVGGSMIGGMKETQEMIDFA 316 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~----~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l 316 (361)
.+...++|+||||+|.-.+...+...+..+-+-|.+..+..+. + ++-.. +.+..++.....-+...+..+++.|
T Consensus 82 ~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~d~~~iV~GVN~~~-~~~~~~IIS~aSCTtn~laP~~k~l 160 (169)
T d1dssg1 82 PWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSADAPMFVCGVNLEK-YSKDMKVVSNASNEFGYSQRVIDLI 160 (169)
T ss_dssp CHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSSSCBCCTTTSGGG-CCTTCCEEECCCTTHHHHHHHHHHH
T ss_pred CccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCccccceeeecccccc-cCCCCCEEEChhHHHHHHHHHHHHH
Confidence 3333489999999999887888888898887777776654321 1 11112 2234456655555666677777666
Q ss_pred Hc
Q 018094 317 AK 318 (361)
Q Consensus 317 ~~ 318 (361)
.+
T Consensus 161 ~~ 162 (169)
T d1dssg1 161 KH 162 (169)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.55 E-value=0.03 Score=44.48 Aligned_cols=109 Identities=20% Similarity=0.187 Sum_probs=70.4
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
.|.+|+|.|-|.+|..+++++...|++|++.+.+.++.... ..+|.+.+ ... + .+...+|+.+=|+.+...-.
T Consensus 26 ~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~-~~~g~~~~-~~~--~---~~~~~~DI~iPcA~~~~I~~ 98 (201)
T d1c1da1 26 DGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA-VALGHTAV-ALE--D---VLSTPCDVFAPCAMGGVITT 98 (201)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-CGG--G---GGGCCCSEEEECSCSCCBCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHH-Hhhccccc-Ccc--c---cccccceeeecccccccccH
Confidence 78999999999999999999999999999988887766554 56776543 211 1 12347899887766654334
Q ss_pred HHHHhhccCCEEEEecCCCCCcccC-h-HHHhhCCcEEEec
Q 018094 263 PLIGLLKSQGKLVLVGAPEKPLELP-A-FSLLMGRKIVGGS 301 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~~~~~~-~-~~~~~~~~~i~g~ 301 (361)
...+.++ -+++ ++....++... . ..+..|++.+.+-
T Consensus 99 ~~a~~i~--ak~i-~e~AN~p~~~~~~~~~L~~rgI~~iPD 136 (201)
T d1c1da1 99 EVARTLD--CSVV-AGAANNVIADEAASDILHARGILYAPD 136 (201)
T ss_dssp HHHHHCC--CSEE-CCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred HHHhhhh--hhee-eccCCCCcchhhHHHHhcccceEEEeh
Confidence 4455553 3444 33323333322 2 2356677776553
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=95.45 E-value=0.011 Score=51.15 Aligned_cols=79 Identities=20% Similarity=0.147 Sum_probs=54.0
Q ss_pred CCCCCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH----cCCc--EEe--cCCCHHHHHHhcCCcc
Q 018094 179 GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER----LGAD--SFL--VSRDQDEMQAAMGTMD 249 (361)
Q Consensus 179 ~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~----~g~~--~v~--~~~~~~~~~~~~~g~d 249 (361)
..+.+|++|||+|+ |-+|...++.+...|.+|++++++..+...+.+. .... ..+ |-.+.+.+.++..++|
T Consensus 6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (342)
T d1y1pa1 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA 85 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence 34678999999998 9999999998888899999999887654433211 1111 111 2233334444556899
Q ss_pred EEEEcCCC
Q 018094 250 GIIDTVSA 257 (361)
Q Consensus 250 ~vid~~g~ 257 (361)
.++.++..
T Consensus 86 ~v~~~a~~ 93 (342)
T d1y1pa1 86 GVAHIASV 93 (342)
T ss_dssp EEEECCCC
T ss_pred hhhhhccc
Confidence 99987776
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=95.44 E-value=0.03 Score=46.31 Aligned_cols=78 Identities=22% Similarity=0.336 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcc-chHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHH---HHcCCcEE---ecCCCHHHHHHhc----
Q 018094 181 DKPGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSP---SKKSEAI---ERLGADSF---LVSRDQDEMQAAM---- 245 (361)
Q Consensus 181 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g~-~Vi~~~~~~---~~~~~~~---~~~g~~~v---~~~~~~~~~~~~~---- 245 (361)
++|+.++||.|+ |++|++.+..+...|+ +|+++.++. +...++. +..|.... .|-.+.+.+.++.
T Consensus 6 ~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~ 85 (259)
T d2fr1a1 6 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 85 (259)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred cCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccc
Confidence 688999999997 9999999999888898 577776653 2222322 34565322 3555555554432
Q ss_pred --CCccEEEEcCCCc
Q 018094 246 --GTMDGIIDTVSAV 258 (361)
Q Consensus 246 --~g~d~vid~~g~~ 258 (361)
.+.|.++.+.|..
T Consensus 86 ~~~~i~~vv~~ag~~ 100 (259)
T d2fr1a1 86 DDVPLSAVFHAAATL 100 (259)
T ss_dssp TTSCEEEEEECCCCC
T ss_pred ccccccccccccccc
Confidence 2589999988864
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=95.42 E-value=0.0079 Score=49.18 Aligned_cols=102 Identities=18% Similarity=0.225 Sum_probs=63.4
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcEE-ecCCCHHHHHHhcCCccE
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~v-~~~~~~~~~~~~~~g~d~ 250 (361)
+.....+++|++||=+|+| .|..+..+++. +.+|+.++-+.+-...+ +++.+...+ +...+.+...-..+.||+
T Consensus 8 l~~~~~~~~~~rILDiGcG-tG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~ 85 (234)
T d1xxla_ 8 MIKTAECRAEHRVLDIGAG-AGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI 85 (234)
T ss_dssp HHHHHTCCTTCEEEEESCT-TSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred HHHHhCCCCCCEEEEeCCc-CcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccce
Confidence 4556678999999999975 35666677764 67999999887644332 233443221 211111111111236999
Q ss_pred EEEcCCCcc------cHHHHHHhhccCCEEEEec
Q 018094 251 IIDTVSAVH------PLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~g~~~------~~~~~~~~l~~~G~~v~~g 278 (361)
|+.+..-.+ .++.+.+.|+|+|+++..-
T Consensus 86 v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~ 119 (234)
T d1xxla_ 86 ITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD 119 (234)
T ss_dssp EEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence 987644332 3677888999999988753
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.41 E-value=0.0062 Score=49.80 Aligned_cols=75 Identities=20% Similarity=0.179 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
.+.+|||+|+ |.+|...++.+...|. +|+++++++.+.... +.-..+. +.|..+.+.+.....++|++|.++|..
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~ 91 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 91 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeeccccccccccccccccccccccccc
Confidence 4578999998 9999999998877775 899999875442211 0111222 233444445555556899999999864
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.41 E-value=0.027 Score=44.43 Aligned_cols=90 Identities=13% Similarity=0.173 Sum_probs=62.0
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.|.++.|+|.|.+|...+++++.+|.+|+..++........ ...+.. ...+ +.++....|+|..+..-..
T Consensus 46 ~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~~~~---~~~~---l~~ll~~sD~v~l~~plt~~T~ 118 (191)
T d1gdha1 46 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDE-ASYQAT---FHDS---LDSLLSVSQFFSLNAPSTPETR 118 (191)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-HHHTCE---ECSS---HHHHHHHCSEEEECCCCCTTTT
T ss_pred cccceEEeecccchHHHHHHHHhhccccccccccccccchh-hccccc---ccCC---HHHHHhhCCeEEecCCCCchHh
Confidence 47999999999999999999999999999998765543222 222221 1222 2233334789887654321
Q ss_pred --cHHHHHHhhccCCEEEEecC
Q 018094 260 --PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~ 279 (361)
.-...++.|+++..+|+++.
T Consensus 119 ~li~~~~l~~mk~~a~lIN~sR 140 (191)
T d1gdha1 119 YFFNKATIKSLPQGAIVVNTAR 140 (191)
T ss_dssp TCBSHHHHTTSCTTEEEEECSC
T ss_pred heecHHHhhCcCCccEEEecCC
Confidence 12467888999999999865
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.38 E-value=0.071 Score=40.39 Aligned_cols=93 Identities=15% Similarity=0.260 Sum_probs=58.3
Q ss_pred CEEEEEccchHHH-HHHHHHHHCC-CeEEEEeCCch--hHHHHHHHcCCcEEecCCCHHHHHHhc--CCccEEEEcCCCc
Q 018094 185 MHVGVVGLGGLGH-VAVKFAKAMG-VKVTVISTSPS--KKSEAIERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAV 258 (361)
Q Consensus 185 ~~VlI~Gag~vG~-~a~~la~~~g-~~Vi~~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~--~g~d~vid~~g~~ 258 (361)
=++-|+|+|.+|. ..+++++... .+++.+++.+. +.....+++|.... +...+.+.+.. .++|+||+++...
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~--~~~~d~l~~~~~~~~iDiVf~ATpag 82 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSAS 82 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccc--ccceeeeeecccccccCEEEEcCCch
Confidence 3688999999986 5678888764 48888876443 23345578886532 33334443332 3799999987754
Q ss_pred ccHH--HHHHhhccCCEEEEecC
Q 018094 259 HPLM--PLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 259 ~~~~--~~~~~l~~~G~~v~~g~ 279 (361)
.... .+.+.++.|-.+++...
T Consensus 83 ~h~~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 83 AHVQNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp HHHHHHHHHHHHCTTCEEEECST
T ss_pred hHHHhHHHHHHHHcCCEEEEccc
Confidence 2233 33445666667777654
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.37 E-value=0.017 Score=44.98 Aligned_cols=82 Identities=10% Similarity=0.039 Sum_probs=53.0
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC----cEE--ecCCCHHHHHHhcC
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA----DSF--LVSRDQDEMQAAMG 246 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~----~~v--~~~~~~~~~~~~~~ 246 (361)
.+|.....--++++|||+|+|+++.+++..+...| +++++.|+.++.+.+++.|.. ... ++.. .+.....
T Consensus 7 ~~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~ 82 (177)
T d1nvta1 7 MALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFS---GLDVDLD 82 (177)
T ss_dssp HHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEE---CTTCCCT
T ss_pred HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhh---hhhhccc
Confidence 34444333357889999999999998887776555 999999998888777665531 100 0000 0111123
Q ss_pred CccEEEEcCCCc
Q 018094 247 TMDGIIDTVSAV 258 (361)
Q Consensus 247 g~d~vid~~g~~ 258 (361)
.+|++++|+...
T Consensus 83 ~~dliIn~tp~g 94 (177)
T d1nvta1 83 GVDIIINATPIG 94 (177)
T ss_dssp TCCEEEECSCTT
T ss_pred hhhhhccCCccc
Confidence 689999987653
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.37 E-value=0.026 Score=45.78 Aligned_cols=98 Identities=22% Similarity=0.207 Sum_probs=64.1
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHc---CC-cEEe-cCCCHHHHHHhcCCccEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL---GA-DSFL-VSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~~~---g~-~~v~-~~~~~~~~~~~~~g~d~v 251 (361)
..++||++||=+|+| .|..+..+++..| .+|++++.++...+.+.+.. +. ..+. +....+........+|++
T Consensus 69 l~i~pG~~VLDlGaG-sG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i 147 (227)
T d1g8aa_ 69 FPIKPGKSVLYLGIA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCCCTTCEEEEETTT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred cccCCCCEEEEeccC-CCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEE
Confidence 347999999999974 3677788888875 48999999987765554332 22 1121 222223222223468988
Q ss_pred EEcCCCcc----cHHHHHHhhccCCEEEEe
Q 018094 252 IDTVSAVH----PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 252 id~~g~~~----~~~~~~~~l~~~G~~v~~ 277 (361)
+....... .+..+.+.|+++|.++.+
T Consensus 148 ~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~ 177 (227)
T d1g8aa_ 148 FEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence 87654432 366778899999998865
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.36 E-value=0.026 Score=46.87 Aligned_cols=101 Identities=22% Similarity=0.213 Sum_probs=64.6
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---HcC---C-cEEecCCCHHHHHHh-
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIE---RLG---A-DSFLVSRDQDEMQAA- 244 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~---~~g---~-~~v~~~~~~~~~~~~- 244 (361)
+.....++||++||=.|+| .|.++..+|+..| .+|+.++.+++....+.+ .++ . +..+...+.... ..
T Consensus 88 Ii~~l~i~PG~~VLE~G~G-sG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~-~~~ 165 (264)
T d1i9ga_ 88 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS-ELP 165 (264)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC-CCC
T ss_pred HHHHhCCCCCCEEEecCcC-CcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccc-ccc
Confidence 3445668999999988874 4677788888876 389999988776543322 221 1 222222222110 11
Q ss_pred cCCccEEEEcCCCc-ccHHHHHHhhccCCEEEEe
Q 018094 245 MGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 245 ~~g~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~ 277 (361)
.+.+|.||--...+ ..+..+.+.|+|+|+++.+
T Consensus 166 ~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~ 199 (264)
T d1i9ga_ 166 DGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVY 199 (264)
T ss_dssp TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEE
T ss_pred CCCcceEEEecCCHHHHHHHHHhccCCCCEEEEE
Confidence 23689766545543 4578899999999999877
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.35 E-value=0.11 Score=38.89 Aligned_cols=92 Identities=10% Similarity=0.273 Sum_probs=65.8
Q ss_pred EEEEEcc-chHHHHHHHHHHHCC--CeEEEEeCC--chhHHHHHHHcCCcEEecCCCHH---------------------
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTS--PSKKSEAIERLGADSFLVSRDQD--------------------- 239 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g--~~Vi~~~~~--~~~~~~~~~~~g~~~v~~~~~~~--------------------- 239 (361)
+|.|+|+ |.+|.-+..+.+... .+|+..+-+ -+...+.+++|.+..++-.++..
T Consensus 3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~ 82 (151)
T d1q0qa2 3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ 82 (151)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence 6899998 999999999999873 577666543 34566667788887765443321
Q ss_pred -HHHHhc--CCccEEEEcCCCcccHHHHHHhhccCCEEEEe
Q 018094 240 -EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 240 -~~~~~~--~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 277 (361)
.+.++. ..+|+|+....+...+...+.+++.+-++.+.
T Consensus 83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA 123 (151)
T d1q0qa2 83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA 123 (151)
T ss_dssp HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence 111111 26899999998888888899888888776554
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.34 E-value=0.034 Score=43.65 Aligned_cols=90 Identities=16% Similarity=0.128 Sum_probs=62.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.+.++.|+|.|.+|...+++++.+|.+|+..++........ +..+... ..+ +.++....|+|.-+..-..
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~~~~~---~~~---l~~~l~~sD~v~~~~plt~~T~ 115 (188)
T d2naca1 43 EAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KELNLTW---HAT---REDMYPVCDVVTLNCPLHPETE 115 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHHTCEE---CSS---HHHHGGGCSEEEECSCCCTTTT
T ss_pred cccceeeccccccchhhhhhhhccCceEEEEeecccccccc-ccccccc---cCC---HHHHHHhccchhhcccccccch
Confidence 68899999999999999999999999999999765433222 3444322 112 2234456888877655322
Q ss_pred --cHHHHHHhhccCCEEEEecC
Q 018094 260 --PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~ 279 (361)
.-...++.|+++..+|+++.
T Consensus 116 ~li~~~~l~~mk~ga~lIN~aR 137 (188)
T d2naca1 116 HMINDETLKLFKRGAYIVNTAR 137 (188)
T ss_dssp TCBSHHHHTTSCTTEEEEECSC
T ss_pred hhhHHHHHHhCCCCCEEEecCc
Confidence 12457788888888888864
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=95.33 E-value=0.032 Score=46.14 Aligned_cols=72 Identities=19% Similarity=0.249 Sum_probs=47.9
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHHc----CCcEEec---CC---C-HHHHH-------Hhc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK-SEAIERL----GADSFLV---SR---D-QDEMQ-------AAM 245 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~-~~~~~~~----g~~~v~~---~~---~-~~~~~-------~~~ 245 (361)
+.||.|+ +++|.+.+..+...|++|+++.++.++. +++.+++ +.+.... .. . ++.+. +..
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 5688897 9999999999999999999999886643 3333332 3333221 11 1 22222 223
Q ss_pred CCccEEEEcCCC
Q 018094 246 GTMDGIIDTVSA 257 (361)
Q Consensus 246 ~g~d~vid~~g~ 257 (361)
+++|++++++|.
T Consensus 83 g~iDilvnnAG~ 94 (266)
T d1mxha_ 83 GRCDVLVNNASA 94 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 579999999985
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.32 E-value=0.26 Score=37.93 Aligned_cols=91 Identities=9% Similarity=0.094 Sum_probs=60.5
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEeCC-chhHHHHHHHcCCcE-EecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTS-PSKKSEAIERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~-~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
++.|+|.|.+|...++.++.. +.+++.+++. .++...+.++++... .-.+.+.+.+.+ ...+|+|+-++....-..
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~~iD~v~I~tp~~~h~~ 81 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLE-DPEIDALYVPLPTSLHVE 81 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHH-CTTCCEEEECCCGGGHHH
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhh-ccccceeeecccchhhcc
Confidence 478899999999988888876 5688866554 445566667777421 111233333322 247999999988876577
Q ss_pred HHHHhhccCCEEEEec
Q 018094 263 PLIGLLKSQGKLVLVG 278 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g 278 (361)
.+..++..+ .=+.+.
T Consensus 82 ~~~~~l~~g-~~v~~E 96 (184)
T d1ydwa1 82 WAIKAAEKG-KHILLE 96 (184)
T ss_dssp HHHHHHTTT-CEEEEC
T ss_pred hhhhhhhcc-ceeecc
Confidence 777777765 556664
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.26 E-value=0.0024 Score=49.28 Aligned_cols=86 Identities=20% Similarity=0.252 Sum_probs=55.7
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC--c---EEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA--D---SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
+|+|+|+|.+|.+.+..+...|.+|.++++.+++.... +..+. . ..+.....+ ..+.+|++|-++....
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~D~iii~vka~~- 75 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-NLVETDGSIFNESLTANDPD----FLATSDLLLVTLKAWQ- 75 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-EEECTTSCEEEEEEEESCHH----HHHTCSEEEECSCGGG-
T ss_pred EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhh-ccccCCccccccccccchhh----hhcccceEEEeecccc-
Confidence 58999999999999988888999999999887643221 11221 1 111112222 2246999999999865
Q ss_pred HHHHHHhh----ccCCEEEEe
Q 018094 261 LMPLIGLL----KSQGKLVLV 277 (361)
Q Consensus 261 ~~~~~~~l----~~~G~~v~~ 277 (361)
....++.+ .++..++.+
T Consensus 76 ~~~~~~~l~~~~~~~~~Iv~~ 96 (167)
T d1ks9a2 76 VSDAVKSLASTLPVTTPILLI 96 (167)
T ss_dssp HHHHHHHHHTTSCTTSCEEEE
T ss_pred hHHHHHhhccccCcccEEeec
Confidence 55544443 445566665
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.23 E-value=0.016 Score=48.18 Aligned_cols=75 Identities=16% Similarity=0.090 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-chHHHHHHHHH-H--HCCCeEEEEeCCchhHHHHHHHcC-----CcE---EecCCCHHHHHHhc-----
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFA-K--AMGVKVTVISTSPSKKSEAIERLG-----ADS---FLVSRDQDEMQAAM----- 245 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la-~--~~g~~Vi~~~~~~~~~~~~~~~~g-----~~~---v~~~~~~~~~~~~~----- 245 (361)
.|+.+||.|+ +++|.+.++.+ + ..|++|+++.++.++.+++.+++. ... ..|-.+++.+.++.
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 5677888897 89999887655 4 368999999999988777766542 221 13445554433321
Q ss_pred ------CCccEEEEcCCC
Q 018094 246 ------GTMDGIIDTVSA 257 (361)
Q Consensus 246 ------~g~d~vid~~g~ 257 (361)
...|++++++|.
T Consensus 85 ~~~~~~~~~~~lvnnag~ 102 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp SCCCTTCCEEEEEECCCC
T ss_pred hhhhccCceEEEEecccc
Confidence 146888888764
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=95.22 E-value=0.014 Score=48.25 Aligned_cols=73 Identities=12% Similarity=0.103 Sum_probs=48.2
Q ss_pred CEEEEEcc-chHHHHHHHHHH---HCCCeEEEEeCCchhHHHHHH--HcCCcE---EecCCCHHHHH-------Hhc--C
Q 018094 185 MHVGVVGL-GGLGHVAVKFAK---AMGVKVTVISTSPSKKSEAIE--RLGADS---FLVSRDQDEMQ-------AAM--G 246 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~---~~g~~Vi~~~~~~~~~~~~~~--~~g~~~---v~~~~~~~~~~-------~~~--~ 246 (361)
++|||.|+ +++|++.++.+. ..|++|++++++.++..++.+ +.+... .+|..+++.+. +.. +
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 82 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ 82 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence 57999998 999999887654 358899999999887655422 122222 23444443222 221 3
Q ss_pred CccEEEEcCCC
Q 018094 247 TMDGIIDTVSA 257 (361)
Q Consensus 247 g~d~vid~~g~ 257 (361)
++|++++++|.
T Consensus 83 ~iDiLvnNAg~ 93 (248)
T d1snya_ 83 GLNVLFNNAGI 93 (248)
T ss_dssp CCSEEEECCCC
T ss_pred CcceEEeeccc
Confidence 69999999875
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=95.15 E-value=0.021 Score=45.42 Aligned_cols=86 Identities=23% Similarity=0.293 Sum_probs=59.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
.|.+|.|+|.|.+|...+++++.+|++|++.++...+.. ... +...+ +.++....|++.-+......
T Consensus 44 ~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~----~~~~~---l~~l~~~~D~v~~~~plt~~T~ 112 (199)
T d1dxya1 44 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD----HPD----FDYVS---LEDLFKQSDVIDLHVPGIEQNT 112 (199)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC----CTT----CEECC---HHHHHHHCSEEEECCCCCGGGT
T ss_pred cceeeeeeecccccccccccccccceeeeccCCccchhh----hcc----hhHHH---HHHHHHhcccceeeeccccccc
Confidence 478999999999999999999999999999987644311 111 11122 22333347888876554321
Q ss_pred ---HHHHHHhhccCCEEEEecC
Q 018094 261 ---LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ---~~~~~~~l~~~G~~v~~g~ 279 (361)
-...++.|+++..+|.++.
T Consensus 113 ~li~~~~l~~mk~~a~lIN~aR 134 (199)
T d1dxya1 113 HIINEAAFNLMKPGAIVINTAR 134 (199)
T ss_dssp TSBCHHHHHHSCTTEEEEECSC
T ss_pred ccccHHHhhccCCceEEEeccc
Confidence 2457788999999999975
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.11 E-value=0.026 Score=48.46 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=61.2
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHH---HcC-----------CcEE-ecCCC-H
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIE---RLG-----------ADSF-LVSRD-Q 238 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~---~~g-----------~~~v-~~~~~-~ 238 (361)
...+++||++||=.|+|. |.+++.+|+..|. +|+.+..+++....+.+ +++ .+.+ +...+ .
T Consensus 92 ~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~ 170 (324)
T d2b25a1 92 SMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDIS 170 (324)
T ss_dssp HHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTT
T ss_pred HHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchh
Confidence 345589999999888754 8888899998764 89999988775433322 221 1111 11111 1
Q ss_pred HHHHHhc-CCccEEEEcCCC-cccHHHHHHhhccCCEEEEec
Q 018094 239 DEMQAAM-GTMDGIIDTVSA-VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 239 ~~~~~~~-~g~d~vid~~g~-~~~~~~~~~~l~~~G~~v~~g 278 (361)
+...... ..+|.||--... ...+..+.+.|+|||+++.+-
T Consensus 171 ~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~ 212 (324)
T d2b25a1 171 GATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYV 212 (324)
T ss_dssp CCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEE
T ss_pred hcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEe
Confidence 1111112 257876633333 245888999999999999874
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=95.09 E-value=0.11 Score=38.95 Aligned_cols=94 Identities=23% Similarity=0.155 Sum_probs=61.5
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCc
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAV 258 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~~v~-~~~~~~~~~~~~-~g~d~vid~~g~~ 258 (361)
-++++|.|.|.+|...++.++..|.+++++...+++..+..++ .|...+. |..+++.++++. +.+|.++-+.+..
T Consensus 3 knHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d 82 (153)
T d1id1a_ 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccH
Confidence 4679999999999999999999999999999887654444333 2444333 234455555443 4799999988875
Q ss_pred cc-HHH--HHHhhccCCEEEEe
Q 018094 259 HP-LMP--LIGLLKSQGKLVLV 277 (361)
Q Consensus 259 ~~-~~~--~~~~l~~~G~~v~~ 277 (361)
.. +.. ..+.+.+.-+++..
T Consensus 83 ~~n~~~~~~~r~~~~~~~iia~ 104 (153)
T d1id1a_ 83 ADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHHHHHHHHHHHHTSSSCEEEE
T ss_pred HHHHHHHHHHHHhCCCCceEEE
Confidence 42 111 22234455555544
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.02 E-value=0.023 Score=45.65 Aligned_cols=95 Identities=21% Similarity=0.194 Sum_probs=57.8
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
++++++||=+|+|. |..+..+++ .|.+|+.++.+.+....+.+ ..+........+...+....+.+|+|+-...-
T Consensus 35 l~~~~~ILDiGcG~-G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~~~~~fD~I~~~~~l 112 (226)
T d1ve3a1 35 MKKRGKVLDLACGV-GGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSI 112 (226)
T ss_dssp CCSCCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCG
T ss_pred cCCCCEEEEECCCc-chhhhhHhh-hhcccccccccccchhhhhhhhccccccccccccccccccccCcCceEEEEecch
Confidence 57888999999853 666677776 48899999988765433322 23332111111211111112469998875443
Q ss_pred cc--------cHHHHHHhhccCCEEEEe
Q 018094 258 VH--------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 258 ~~--------~~~~~~~~l~~~G~~v~~ 277 (361)
.+ .++.+.+.|+|||+++..
T Consensus 113 ~~~~~~d~~~~l~~i~~~LkpgG~lii~ 140 (226)
T d1ve3a1 113 VHFEPLELNQVFKEVRRVLKPSGKFIMY 140 (226)
T ss_dssp GGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence 22 355678889999998754
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=95.01 E-value=0.042 Score=47.40 Aligned_cols=76 Identities=21% Similarity=0.190 Sum_probs=53.8
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCcEE-ecCCCHHHHHHhcC--CccEEEEc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERL----GADSF-LVSRDQDEMQAAMG--TMDGIIDT 254 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~----g~~~v-~~~~~~~~~~~~~~--g~d~vid~ 254 (361)
.+++|||+|+ |-+|...++.+...|.+|+++++...+...+.+.. +.+.+ .|-.+.+.+.++.. .+|+++.+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 4689999998 99999999999999999999998776433332322 12222 24445555555443 68999998
Q ss_pred CCCc
Q 018094 255 VSAV 258 (361)
Q Consensus 255 ~g~~ 258 (361)
++..
T Consensus 87 aa~~ 90 (356)
T d1rkxa_ 87 AAQP 90 (356)
T ss_dssp CSCC
T ss_pred hccc
Confidence 8764
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.99 E-value=0.085 Score=41.15 Aligned_cols=39 Identities=13% Similarity=0.168 Sum_probs=33.6
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 223 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~ 223 (361)
++|.|+|+|.+|...+.++...|.+|++.+.+++.....
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~ 43 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG 43 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence 568999999999999988889999999999998765443
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=94.92 E-value=0.093 Score=40.80 Aligned_cols=97 Identities=22% Similarity=0.233 Sum_probs=59.3
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCc-EE-ecCCCHHHHHHhcCCccEEEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD-SF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~-~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
..+++|++||=+|+|. |..++.+|+. +.+|+.++.+++....+ ++++|.. .+ +-..+..........+|.||-
T Consensus 29 l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~~~~~~~~~D~v~~ 106 (186)
T d1l3ia_ 29 AEPGKNDVAVDVGCGT-GGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVV 106 (186)
T ss_dssp HCCCTTCEEEEESCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEE
T ss_pred cCCCCCCEEEEEECCe-Eccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhhcccccCCcCEEEE
Confidence 3478999998888632 3334455654 56999999887754333 3456652 22 222332222222347999987
Q ss_pred cCCCcc---cHHHHHHhhccCCEEEEe
Q 018094 254 TVSAVH---PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 254 ~~g~~~---~~~~~~~~l~~~G~~v~~ 277 (361)
...... .++.+.+.|+|+|+++..
T Consensus 107 ~~~~~~~~~~~~~~~~~LkpgG~lvi~ 133 (186)
T d1l3ia_ 107 GGSGGELQEILRIIKDKLKPGGRIIVT 133 (186)
T ss_dssp SCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred eCccccchHHHHHHHHHhCcCCEEEEE
Confidence 654432 355677889999998765
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=94.89 E-value=0.083 Score=40.43 Aligned_cols=95 Identities=19% Similarity=0.324 Sum_probs=62.7
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--HcC-------Cc---------------EEecCCCHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE--RLG-------AD---------------SFLVSRDQDEM 241 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~--~~g-------~~---------------~v~~~~~~~~~ 241 (361)
+|.|.|-|.+|+.+.+.+...+.+++.+....+ .+.++- ++. .+ .+...++++.+
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~-~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i 80 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTD-NKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI 80 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSC-HHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcc-hhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence 478899999999999988877888888877643 222211 111 11 01112223333
Q ss_pred HHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 242 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 242 ~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+...++|+|+||+|.-.+.+.+...++.+-+-|.+..+.
T Consensus 81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 120 (168)
T d2g82a1 81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (168)
T ss_dssp CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred cccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence 3333489999999999887888888888777666665544
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=94.89 E-value=0.15 Score=34.90 Aligned_cols=74 Identities=9% Similarity=0.223 Sum_probs=52.2
Q ss_pred CCCCCEEEEEccchHHHHH-HHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 181 DKPGMHVGVVGLGGLGHVA-VKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a-~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
.+..+++.++|-|++|..+ +++++..|.+|...+.......+..++.|... ....+++.+ .+.|+|+-+.+-+.
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v-~~g~~~~~i----~~~d~vV~S~AI~~ 79 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKI-YIGHAEEHI----EGASVVVVSSAIKD 79 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEE-EESCCGGGG----TTCSEEEECTTSCT
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeE-EECCccccC----CCCCEEEECCCcCC
Confidence 4567889999988888777 89999999999999987554444446778754 333333332 46788887666543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=94.83 E-value=0.083 Score=40.35 Aligned_cols=91 Identities=21% Similarity=0.155 Sum_probs=59.9
Q ss_pred EEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCC-cEEecCCCHHHHHHhcCCccEEEEcCCCccc--
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~-- 260 (361)
+|+|+|.|.+|...+..++..|. +|++++++.+....+ ++.+. +......+. ......|+|+-|+.....
T Consensus 3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a-~~~~~~~~~~~~~~~----~~~~~~dlIila~p~~~~~~ 77 (171)
T d2g5ca2 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTSIAK----VEDFSPDFVMLSSPVRTFRE 77 (171)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESCGGG----GGGTCCSEEEECSCHHHHHH
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHH-HHhhcchhhhhhhhh----hhccccccccccCCchhhhh
Confidence 68999999999999988888874 888888887776554 67775 333222111 112357888888775431
Q ss_pred -HHHHHHhhccCCEEEEecCCC
Q 018094 261 -LMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 261 -~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+......++++..+++++...
T Consensus 78 vl~~l~~~~~~~~ii~d~~s~k 99 (171)
T d2g5ca2 78 IAKKLSYILSEDATVTDQGSVK 99 (171)
T ss_dssp HHHHHHHHSCTTCEEEECCSCC
T ss_pred hhhhhhcccccccccccccccc
Confidence 233445566677777776543
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.78 E-value=0.041 Score=46.19 Aligned_cols=102 Identities=12% Similarity=0.111 Sum_probs=65.5
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcE-E-ecCCCHHHHHHhcC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADS-F-LVSRDQDEMQAAMG 246 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~-v-~~~~~~~~~~~~~~ 246 (361)
+.-+-....+++|++||=+|+|.=| .+..+++..|++|+.++.+++....+ +++.|... + +...+. ....+
T Consensus 41 ~~~~~~~l~l~~g~~VLDiGCG~G~-~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~---~~~~~ 116 (280)
T d2fk8a1 41 VDLNLDKLDLKPGMTLLDIGCGWGT-TMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGW---EDFAE 116 (280)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSH-HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCG---GGCCC
T ss_pred HHHHHHHcCCCCCCEEEEecCCchH-HHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhh---hhhcc
Confidence 4445556678999999999986434 45668888899999999998765433 23344321 1 111121 22345
Q ss_pred CccEEEEcCCC-----c---ccHHHHHHhhccCCEEEEe
Q 018094 247 TMDGIIDTVSA-----V---HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 247 g~d~vid~~g~-----~---~~~~~~~~~l~~~G~~v~~ 277 (361)
.+|.|+-.--- . ..++...+.|+|+|+++.-
T Consensus 117 ~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~ 155 (280)
T d2fk8a1 117 PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ 155 (280)
T ss_dssp CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred chhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence 78888653222 2 2356678899999999863
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=94.75 E-value=0.017 Score=47.10 Aligned_cols=93 Identities=14% Similarity=0.240 Sum_probs=61.9
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc--
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV-- 258 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~-- 258 (361)
++++.+||=+|+| .|..+..+++ .|++|+.++.+++.... +++-+...++.... +.+....+.+|+|+......
T Consensus 40 ~~~~~~vLDiGcG-~G~~~~~l~~-~~~~v~giD~s~~~l~~-a~~~~~~~~~~~~~-~~l~~~~~~fD~ii~~~~~~~~ 115 (246)
T d2avna1 40 LKNPCRVLDLGGG-TGKWSLFLQE-RGFEVVLVDPSKEMLEV-AREKGVKNVVEAKA-EDLPFPSGAFEAVLALGDVLSY 115 (246)
T ss_dssp CCSCCEEEEETCT-TCHHHHHHHT-TTCEEEEEESCHHHHHH-HHHHTCSCEEECCT-TSCCSCTTCEEEEEECSSHHHH
T ss_pred cCCCCEEEEECCC-Cchhcccccc-cceEEEEeecccccccc-cccccccccccccc-cccccccccccceeeecchhhh
Confidence 4577889888987 6787888776 58999999999876644 45655544443322 11111124799998754321
Q ss_pred -----ccHHHHHHhhccCCEEEEe
Q 018094 259 -----HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 259 -----~~~~~~~~~l~~~G~~v~~ 277 (361)
..+....+.|+|||.++..
T Consensus 116 ~~d~~~~l~~i~r~Lk~gG~~ii~ 139 (246)
T d2avna1 116 VENKDKAFSEIRRVLVPDGLLIAT 139 (246)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhHHHHHHHHHhhcCcCcEEEEE
Confidence 2356677899999988754
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.73 E-value=0.013 Score=38.77 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=31.5
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchh
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK 219 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~ 219 (361)
++|.|+|+|.+|++.++-++.+|.++++.+..++.
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 47899999999999999999999999999987653
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=94.70 E-value=0.51 Score=34.87 Aligned_cols=91 Identities=18% Similarity=0.241 Sum_probs=56.1
Q ss_pred CEEEEEc-cchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHH----HHHHhc---CCccEEEEcCC
Q 018094 185 MHVGVVG-LGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQD----EMQAAM---GTMDGIIDTVS 256 (361)
Q Consensus 185 ~~VlI~G-ag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~----~~~~~~---~g~d~vid~~g 256 (361)
++|.|+| .|.+|...+..++..|.+|.+.++......+.. .-+++.++...... .+.+.. ..=.+++|+.+
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S 88 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS 88 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence 5799999 699999999999999999999999877654442 33555555443322 122222 23357888876
Q ss_pred CcccHHHHHHhhccCCEEEEe
Q 018094 257 AVHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~ 277 (361)
........+.... .++++..
T Consensus 89 vk~~~~~~~~~~~-~~~~v~~ 108 (152)
T d2pv7a2 89 VKREPLAKMLEVH-TGAVLGL 108 (152)
T ss_dssp CCHHHHHHHHHHC-SSEEEEE
T ss_pred cCHHHHHHHHHHc-cCCEEEe
Confidence 6543333333222 3455543
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=94.63 E-value=0.071 Score=44.63 Aligned_cols=74 Identities=20% Similarity=0.249 Sum_probs=51.9
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-----HH--HHHHHcCCcEE-ecCCCHHHHHHhcCCccEEEEc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----KS--EAIERLGADSF-LVSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-----~~--~~~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~ 254 (361)
-.+|||+|+ |.+|...+..+...|.+|++++++... .. ...+..+++.+ .|..+.+.+.+...+.+.++.+
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~ 82 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 82 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence 345999998 999999999999999999999886432 11 11123344433 2445667777777788888887
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
++.
T Consensus 83 ~~~ 85 (312)
T d1qyda_ 83 LAG 85 (312)
T ss_dssp CCC
T ss_pred hhh
Confidence 754
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.59 E-value=0.027 Score=49.00 Aligned_cols=74 Identities=11% Similarity=0.143 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCC-c-EEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGA-D-SFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~-~-~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
.+-+|||+|+ |-+|...+..+...|.+|+++++....... ..... . ...|..+.+...+...++|.|+.+++..
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~ 90 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--EDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADM 90 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hhcccCcEEEeechhHHHHHHHhhcCCeEeeccccc
Confidence 4678999998 999999999999999999998765443211 11222 2 2234455566666667999999987554
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.54 E-value=0.017 Score=45.38 Aligned_cols=35 Identities=14% Similarity=0.344 Sum_probs=30.9
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCch
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS 218 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~ 218 (361)
+++|+|+|+|+.|+.++..++..|+ .|+++.+.+.
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 5789999999999999999999998 5888887654
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=94.53 E-value=0.28 Score=37.34 Aligned_cols=130 Identities=13% Similarity=0.180 Sum_probs=75.1
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEeCCc---hhHHHHHHH------cCCc------E-Ee--------cCCCHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP---SKKSEAIER------LGAD------S-FL--------VSRDQDE 240 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~---~~~~~~~~~------~g~~------~-v~--------~~~~~~~ 240 (361)
+|.|.|=|.+|+++..++... ..+++.+.... +....+.+. |..+ . ++ +.++++.
T Consensus 3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~~ 82 (169)
T d1u8fo1 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSK 82 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChhh
Confidence 578999999999999877654 46888886632 223333331 1111 1 11 1122233
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc-c----cChHHHhhCCcEEEecccCCHHHHHHHHHH
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL-E----LPAFSLLMGRKIVGGSMIGGMKETQEMIDF 315 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~----~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 315 (361)
+.+..-++|+|+||+|.-.....+...+..+-+-|.+..+.... + ++-.. +....++.....-+...+..+++.
T Consensus 83 i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~d~~tiV~GvN~~~-~~~~~~iIS~aSCTtn~~aPv~~v 161 (169)
T d1u8fo1 83 IKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSADAPMFVMGVNHEK-YDNSLKIISNASNEFGYSNRVVDL 161 (169)
T ss_dssp CCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCSSSCBCCTTTTGGG-CCTTCSEEECCCTTHHHHHHHHHH
T ss_pred CCccccCCCEEEEecceeccHHHHHHHHhcCCceEeecccccccceEEeecCHHH-cCCCCCEEECccHHHHHHHHHHHH
Confidence 33333489999999999877778888888888777776654321 1 11111 223334555444555556555555
Q ss_pred H
Q 018094 316 A 316 (361)
Q Consensus 316 l 316 (361)
|
T Consensus 162 l 162 (169)
T d1u8fo1 162 M 162 (169)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.50 E-value=0.052 Score=38.97 Aligned_cols=40 Identities=23% Similarity=0.145 Sum_probs=35.2
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
....++++|+|+|+|.+|+=.+..++.+|.+|.++.+.+.
T Consensus 17 l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 17 LDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred HhhCCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccch
Confidence 3457889999999999999999999999999999998653
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=94.49 E-value=0.055 Score=44.50 Aligned_cols=77 Identities=14% Similarity=0.253 Sum_probs=49.9
Q ss_pred CCCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcEEe--cCCCHHHHHH----h---cC
Q 018094 182 KPGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSFL--VSRDQDEMQA----A---MG 246 (361)
Q Consensus 182 ~~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~v~--~~~~~~~~~~----~---~~ 246 (361)
-+|+++||.|+ | ++|.+.+..+...|++|+++.++++....+ .+..+....+ +..+...+.. . .+
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 47899999987 6 688999999999999999999886543322 2233332222 2233222221 1 23
Q ss_pred CccEEEEcCCCc
Q 018094 247 TMDGIIDTVSAV 258 (361)
Q Consensus 247 g~d~vid~~g~~ 258 (361)
..|+.+++++..
T Consensus 83 ~~d~~v~~a~~~ 94 (258)
T d1qsga_ 83 KFDGFVHSIGFA 94 (258)
T ss_dssp SEEEEEECCCCC
T ss_pred ccceEEEeeccc
Confidence 689999987663
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.46 E-value=0.0068 Score=51.97 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=43.7
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-Cc--EEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~--~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
++|||+|+ |-+|...+..+...|.+|+++++......+....+- .. .+.+. +.+..+..++|+||.+++.
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~d~VihlAa~ 75 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINH---DVVEPLYIEVDQIYHLASP 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEEC---CTTSCCCCCCSEEEECCSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEeh---HHHHHHHcCCCEEEECccc
Confidence 57999998 999999999998899999998753222111111111 11 12222 1122233479999998764
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.35 E-value=0.026 Score=46.40 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=31.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
..++|+|+|+|+.|++++..++..|.+|+++.+++
T Consensus 3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45789999999999999999999999999998753
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=94.35 E-value=0.74 Score=35.12 Aligned_cols=130 Identities=18% Similarity=0.233 Sum_probs=77.4
Q ss_pred EEEEEccchHHHH-HHHHHHHCC--CeEEEEeCC-chhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 186 HVGVVGLGGLGHV-AVKFAKAMG--VKVTVISTS-PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 186 ~VlI~Gag~vG~~-a~~la~~~g--~~Vi~~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
+|.|+|.|.+|.- .+..++..+ .+++.+++. .++...+.++++...++ .+.+.+.+ ...+|+|+-++....-.
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--~~~~ell~-~~~id~v~I~tp~~~h~ 81 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--DSYEELLE-SGLVDAVDLTLPVELNL 81 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--SCHHHHHH-SSCCSEEEECCCGGGHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--eeeecccc-ccccceeeccccccccc
Confidence 5789999999964 566666643 377765544 55566667778876553 33333222 24699999988776546
Q ss_pred HHHHHhhccCCEEEEecCCCCCcccChHH------Hh-hCCcEE-Eeccc-CC--HHHHHHHHHHHHcCCCc
Q 018094 262 MPLIGLLKSQGKLVLVGAPEKPLELPAFS------LL-MGRKIV-GGSMI-GG--MKETQEMIDFAAKHNIR 322 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~~~~~~~~~~~~------~~-~~~~~i-~g~~~-~~--~~~~~~~~~~l~~~~l~ 322 (361)
..+..++.. |.-|.+.- ++..+... +. .++..+ .++.. .+ ...+..+.+++.+|++.
T Consensus 82 ~~~~~al~~-gk~V~~EK---Pl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig 149 (181)
T d1zh8a1 82 PFIEKALRK-GVHVICEK---PISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN 149 (181)
T ss_dssp HHHHHHHHT-TCEEEEES---SSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred ccccccccc-chhhhcCC---CCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence 666666665 56666643 33222222 11 234333 34322 22 25578888999998764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=94.35 E-value=0.077 Score=45.47 Aligned_cols=36 Identities=19% Similarity=0.104 Sum_probs=30.2
Q ss_pred CCEEEEEcc---chHHHHHHHHHHHCCCeEEEEeCCchh
Q 018094 184 GMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSK 219 (361)
Q Consensus 184 g~~VlI~Ga---g~vG~~a~~la~~~g~~Vi~~~~~~~~ 219 (361)
++.+||.|+ .++|.+.++.+...|++|+++.++...
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~ 40 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVY 40 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhh
Confidence 467799994 389999999999999999998876553
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=94.23 E-value=0.28 Score=37.58 Aligned_cols=96 Identities=21% Similarity=0.253 Sum_probs=63.7
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCCcccH-
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 261 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~- 261 (361)
.+|-|+|.|.+|...+.-+...|.+|++.+++.++.+++.++ ++. ........+.+.......|.++-+.......
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~-~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~ 81 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-EAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD 81 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-TTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh-ccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence 458889999999999988888999999999999988777543 321 1111223344455556677777776664322
Q ss_pred ---HHHHHhhccCCEEEEecCCC
Q 018094 262 ---MPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 262 ---~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.....++++-.++.++...
T Consensus 82 ~v~~~l~~~~~~g~iiid~sT~~ 104 (176)
T d2pgda2 82 NFIEKLVPLLDIGDIIIDGGNSE 104 (176)
T ss_dssp HHHHHHHHHCCTTCEEEECSCCC
T ss_pred HHHHHHHhccccCcEEEecCcch
Confidence 23444566666777775433
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.23 E-value=0.041 Score=39.38 Aligned_cols=37 Identities=22% Similarity=0.215 Sum_probs=32.9
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
+..++++|+|+|.+|+=+++.+..+|.+|+++.+.+.
T Consensus 20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 20 EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred hcCCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence 4457899999999999999999999999999987753
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=94.21 E-value=0.11 Score=43.19 Aligned_cols=34 Identities=21% Similarity=0.120 Sum_probs=28.7
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 219 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~ 219 (361)
.+||.|+ +++|.+.++.+...|++|++..+++++
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 38 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAA 38 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHH
Confidence 4677887 899999999999999999998776543
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.20 E-value=0.12 Score=41.66 Aligned_cols=98 Identities=16% Similarity=0.109 Sum_probs=59.4
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHc---CC-cEEe-cCCCHHHHHHhcCCccEEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERL---GA-DSFL-VSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~---g~-~~v~-~~~~~~~~~~~~~g~d~vi 252 (361)
..+++|++||=+|+| .|..+..+++.. +.+|++++-++...+.+.+.. +. ..++ +.............+|+++
T Consensus 70 l~ikpG~~VLDlGcG-sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~ 148 (230)
T d1g8sa_ 70 MPIKRDSKILYLGAS-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp CCCCTTCEEEEESCC-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCCCEEEEeCEE-cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEee
Confidence 347999999999974 356666777764 349999999987665553321 21 2222 1222222222223566677
Q ss_pred EcCCCcc----cHHHHHHhhccCCEEEEe
Q 018094 253 DTVSAVH----PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 253 d~~g~~~----~~~~~~~~l~~~G~~v~~ 277 (361)
....... .+..+.+.|+|+|.++.+
T Consensus 149 ~~~~~~~~~~~~l~~~~r~LKpgG~~~i~ 177 (230)
T d1g8sa_ 149 EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHHHhcccCceEEEE
Confidence 6554332 255677889999998866
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=94.15 E-value=0.36 Score=36.84 Aligned_cols=95 Identities=23% Similarity=0.233 Sum_probs=64.1
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc----EEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----SFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
+|-|+|.|.+|...+.-+...|.+|++.+++.++..++.++.+.. ........+.+.......+.++.+.......
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT 82 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred EEEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence 367889999999999999899999999999999988886664421 1112223334444445667777776665423
Q ss_pred ----HHHHHhhccCCEEEEecCC
Q 018094 262 ----MPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 262 ----~~~~~~l~~~G~~v~~g~~ 280 (361)
......+.++..++.++..
T Consensus 83 ~~~~~~~~~~~~~~~iii~~st~ 105 (178)
T d1pgja2 83 DSTIEQLKKVFEKGDILVDTGNA 105 (178)
T ss_dssp HHHHHHHHHHCCTTCEEEECCCC
T ss_pred hhhhhhhhhhccccceecccCcc
Confidence 3455566777777776543
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=94.15 E-value=0.05 Score=39.01 Aligned_cols=37 Identities=19% Similarity=0.365 Sum_probs=33.3
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
++..++|+|+|+|.+|+=.+..++.+|.+|+++.+.+
T Consensus 19 l~~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 19 IKESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CCCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred cCCCCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence 4557899999999999999999999999999999764
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.12 E-value=0.027 Score=45.76 Aligned_cols=95 Identities=21% Similarity=0.171 Sum_probs=57.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC---CcEEecCCCHHHH-HHhc-CCccEEE-EcC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSFLVSRDQDEM-QAAM-GTMDGII-DTV 255 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~-~~~~-~g~d~vi-d~~ 255 (361)
.+|.+||-+|+| .|..+..+++..+.+|++++.+++....+.+.+. ....+...+.... ..+. +.+|.++ |..
T Consensus 52 ~~g~~VLdIGcG-~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~ 130 (229)
T d1zx0a1 52 SKGGRVLEVGFG-MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 130 (229)
T ss_dssp TTCEEEEEECCT-TSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred cCCCeEEEeecc-chHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeeccc
Confidence 678899999875 3566777888777799998888765544433222 1111112222222 2222 3688874 654
Q ss_pred CCcc----------cHHHHHHhhccCCEEEEe
Q 018094 256 SAVH----------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 256 g~~~----------~~~~~~~~l~~~G~~v~~ 277 (361)
.... .+..+.+.|+|||+++..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~ 162 (229)
T d1zx0a1 131 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 162 (229)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence 4432 245577889999999764
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.11 E-value=0.026 Score=47.26 Aligned_cols=34 Identities=32% Similarity=0.368 Sum_probs=30.7
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
+++|+|+|+|..|+.++..|+..|.+|+++...+
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 5789999999999999999999999999998653
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.94 E-value=0.069 Score=38.58 Aligned_cols=36 Identities=33% Similarity=0.277 Sum_probs=32.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
+.+++|+|+|+|.+|+-+++.+..+|.+|+++.+.+
T Consensus 28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence 567899999999999999999999999999997764
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=93.80 E-value=0.085 Score=45.30 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=73.2
Q ss_pred HhhCCCCCCCEEEEEccchHHHHHHHHHH-HCCC-eEEEEeCCchhHHHHHHHcCCc---EEecCCCHHHHHHhcCCccE
Q 018094 176 RFYGLDKPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAIERLGAD---SFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 176 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~-~~g~-~Vi~~~~~~~~~~~~~~~~g~~---~v~~~~~~~~~~~~~~g~d~ 250 (361)
+..++ +..+++.|+|+|..+.+.++... .++. +|.+..++.++...+++++... .+.... .+++...+.|+
T Consensus 121 ~~LA~-~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~---s~~eav~~ADI 196 (340)
T d1x7da_ 121 QALAR-PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS---SVAEAVKGVDI 196 (340)
T ss_dssp HHHSC-TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS---SHHHHHTTCSE
T ss_pred HHhhc-cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC---CHHHHHhcCCc
Confidence 43443 55688999999999988887654 5676 8999999988877777765421 222222 24455668999
Q ss_pred EEEcCCCcc---cHHHHHHhhccCCEEEEecCCCC-CcccChHH
Q 018094 251 IIDTVSAVH---PLMPLIGLLKSQGKLVLVGAPEK-PLELPAFS 290 (361)
Q Consensus 251 vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~ 290 (361)
|+-|+.... .+. .+.++++-.+..+|.... ..+++...
T Consensus 197 i~t~Tas~s~~Pv~~--~~~l~pG~hI~aiGs~~p~~~Eld~~~ 238 (340)
T d1x7da_ 197 ITTVTADKAYATIIT--PDMLEPGMHLNAVGGDCPGKTELHADV 238 (340)
T ss_dssp EEECCCCSSEEEEEC--GGGCCTTCEEEECSCCBTTBEEECHHH
T ss_pred eeeccccCCCCcccc--hhhcCCCCEEeecccchhhhhccCHHH
Confidence 998775431 122 346899999999987654 34565543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=93.75 E-value=0.072 Score=43.99 Aligned_cols=58 Identities=16% Similarity=0.143 Sum_probs=41.4
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcC--CccEEEEcCCCc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSAV 258 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~--g~d~vid~~g~~ 258 (361)
+|||+|+ |-+|...+..++..|.+|+.+++.+- |..+.+.+.+... .+|+||.+++..
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~~---------------D~~d~~~~~~~l~~~~~d~vih~a~~~ 63 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQDL---------------DITNVLAVNKFFNEKKPNVVINCAAHT 63 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTTC---------------CTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeechhc---------------cCCCHHHHHHHHHHcCCCEEEeecccc
Confidence 5899998 99999999999999999999876531 2233333333322 568888877654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.75 E-value=0.15 Score=41.29 Aligned_cols=94 Identities=16% Similarity=0.126 Sum_probs=58.3
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
..++.++||=+|+|. |..+..+++ .|++|+.++.+++-...+.+ +.+...-+...+.+.+ ...+.+|+|+...+
T Consensus 38 ~~~~~~~iLDiGcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l-~~~~~fD~I~~~~~ 114 (251)
T d1wzna1 38 AKREVRRVLDLACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-AFKNEFDAVTMFFS 114 (251)
T ss_dssp CSSCCCEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-CCCSCEEEEEECSS
T ss_pred cCCCCCEEEEeCCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc-ccccccchHhhhhh
Confidence 346778899999864 677777776 58899999998765433322 2233221222222211 11246999887543
Q ss_pred Cc---------ccHHHHHHhhccCCEEEE
Q 018094 257 AV---------HPLMPLIGLLKSQGKLVL 276 (361)
Q Consensus 257 ~~---------~~~~~~~~~l~~~G~~v~ 276 (361)
.- ..++.+.+.|+|+|.++.
T Consensus 115 ~~~~~~~~~~~~~L~~~~~~LkpgG~lii 143 (251)
T d1wzna1 115 TIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (251)
T ss_dssp GGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 31 235668889999998875
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=93.69 E-value=0.13 Score=43.99 Aligned_cols=72 Identities=21% Similarity=0.174 Sum_probs=48.0
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHHc---CCcEE-ecCCCHHHHHHhc--CCccEEEEcC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS---KKSEAIERL---GADSF-LVSRDQDEMQAAM--GTMDGIIDTV 255 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~---~~~~~~~~~---g~~~v-~~~~~~~~~~~~~--~g~d~vid~~ 255 (361)
+|||+|+ |-+|...+..+...|.+|+++++... ......+.+ +.+.+ .|-.+.+.+.+.. .++|+||.++
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA 81 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence 5899998 99999999999999999999875221 111111222 23322 2445566666553 3899999988
Q ss_pred CC
Q 018094 256 SA 257 (361)
Q Consensus 256 g~ 257 (361)
+.
T Consensus 82 a~ 83 (338)
T d1udca_ 82 GL 83 (338)
T ss_dssp SC
T ss_pred Cc
Confidence 64
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.69 E-value=0.065 Score=38.61 Aligned_cols=38 Identities=29% Similarity=0.453 Sum_probs=34.2
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
++++++++|+|+|.+|.=++..++..|.+|+++.+.+.
T Consensus 27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 27 LRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred hhcCCeEEEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence 46789999999999999999999999999999988753
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=93.65 E-value=0.4 Score=32.16 Aligned_cols=69 Identities=22% Similarity=0.326 Sum_probs=48.1
Q ss_pred EEEEEccchHHHHH-HHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 186 HVGVVGLGGLGHVA-VKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 186 ~VlI~Gag~vG~~a-~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+|-++|-|++|..+ +++++..|.+|...+.......+.++++|+.... ..+.+.+ .++|+|+-+.+-+.
T Consensus 3 ~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~-gh~~~~i----~~~d~vV~SsAI~~ 72 (89)
T d1j6ua1 3 KIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFV-PHSADNW----YDPDLVIKTPAVRD 72 (89)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEES-SCCTTSC----CCCSEEEECTTCCT
T ss_pred EEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEe-eeccccc----CCCCEEEEecCcCC
Confidence 56677888888755 6888999999999998876555556889986433 2333322 35788887666543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.58 E-value=0.068 Score=42.01 Aligned_cols=39 Identities=26% Similarity=0.360 Sum_probs=34.0
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 223 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~ 223 (361)
++|.|+|+|.+|...++++...|.+|++.+.+++.....
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a 43 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS 43 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence 579999999999999999999999999999998754433
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.56 E-value=0.092 Score=41.80 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=60.1
Q ss_pred CCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHH---HHcCC-cEEec-CCCHHHHHHhcCCccEEE
Q 018094 179 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAI---ERLGA-DSFLV-SRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 179 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~---~~~g~-~~v~~-~~~~~~~~~~~~g~d~vi 252 (361)
..++||++||=+|+|. |..+..+++..+. +|+.++-+++..+.+. ++.+- ..++. .............+|+++
T Consensus 52 l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~ 130 (209)
T d1nt2a_ 52 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIY 130 (209)
T ss_dssp CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEE
Confidence 4579999999999742 4466677776653 8999999887654442 33332 12211 122222222223578887
Q ss_pred EcCCCcc----cHHHHHHhhccCCEEEEe
Q 018094 253 DTVSAVH----PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 253 d~~g~~~----~~~~~~~~l~~~G~~v~~ 277 (361)
....... .+..+.+.|+++|+++.+
T Consensus 131 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 159 (209)
T d1nt2a_ 131 QDIAQKNQIEILKANAEFFLKEKGEVVIM 159 (209)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecccChhhHHHHHHHHHHHhccCCeEEEE
Confidence 6544332 356677899999999876
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=93.51 E-value=0.06 Score=38.47 Aligned_cols=35 Identities=23% Similarity=0.242 Sum_probs=31.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
-.++++|+|+|.+|+=+++.++.+|.+|+++.+.+
T Consensus 20 ~p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 20 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEEECCChhhHHHHHHhhccccEEEEEeecc
Confidence 45789999999999999999999999999998875
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.50 E-value=0.05 Score=44.07 Aligned_cols=37 Identities=27% Similarity=0.283 Sum_probs=33.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
+.+++|+|+|+|+.|+.++..++..|.+|+++...++
T Consensus 47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence 5778999999999999999999999999999987654
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.50 E-value=0.058 Score=41.90 Aligned_cols=43 Identities=21% Similarity=0.267 Sum_probs=36.5
Q ss_pred EEEEE-ccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC
Q 018094 186 HVGVV-GLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG 228 (361)
Q Consensus 186 ~VlI~-Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g 228 (361)
+|.|+ |+|.+|.+.++.+...|.+|++..+++++..++.++++
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~ 45 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR 45 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 47788 56999999999999999999999999888777766543
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.41 E-value=0.069 Score=38.53 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=31.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
..++++|+|+|.+|+=+++.+..+|.+|+++.+.+
T Consensus 22 ~p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 22 IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence 45789999999999999999999999999998765
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=93.40 E-value=0.16 Score=38.92 Aligned_cols=96 Identities=13% Similarity=0.195 Sum_probs=59.7
Q ss_pred EEEEEccchHHHHHHHHHHHC----CCeEEEEeCCchh--HHHHHH------HcCCcE---------------EecCCCH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM----GVKVTVISTSPSK--KSEAIE------RLGADS---------------FLVSRDQ 238 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~----g~~Vi~~~~~~~~--~~~~~~------~~g~~~---------------v~~~~~~ 238 (361)
+|.|.|-|-+|+++...+... ..+|+.+....+. ...+.+ +|.... ++..+++
T Consensus 3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p 82 (173)
T d1obfo1 3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNP 82 (173)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCCH
Confidence 478899999999988776542 3467776654321 222222 111110 1112223
Q ss_pred HHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 239 DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 239 ~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+.+..-++|+|+||+|.-.....+...|..+-+-|.+..+.
T Consensus 83 ~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~ 125 (173)
T d1obfo1 83 AQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPG 125 (173)
T ss_dssp GGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCC
T ss_pred HHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCC
Confidence 3333333489999999998776778889999888877776654
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=93.38 E-value=0.073 Score=38.18 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=32.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
+.+++++|+|+|.+|+=.++.++.+|.+|+++.+.+
T Consensus 20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 20 NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred cCCCeEEEECCChHHHHHHHHHHHcCCceEEEEeec
Confidence 456889999999999999999999999999999775
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=93.35 E-value=0.06 Score=43.77 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
+..++|+|+|+|..|++++..+...|.+|+++.+.
T Consensus 4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence 45568999999999999999999999999999864
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=93.34 E-value=0.47 Score=38.70 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=34.2
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
++....--.|.+|+|.|.|.+|..+++.+...|++|+.+...
T Consensus 27 ~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD~ 68 (255)
T d1bgva1 27 MKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSGP 68 (255)
T ss_dssp HHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred HHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Confidence 443332247899999999999999999999999999988753
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=93.19 E-value=0.087 Score=41.36 Aligned_cols=95 Identities=23% Similarity=0.258 Sum_probs=57.9
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCcEE-ecCCCHHHHHHhcCCccEEEEcCC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~~v-~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
+++| +||=+|+| .|..+..+++ .|.+|+.++.+++....+ .++.+.+.+ +...+.+.. ...+.||+|+...-
T Consensus 29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~~~~ 104 (198)
T d2i6ga1 29 VAPG-RTLDLGCG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILSTVV 104 (198)
T ss_dssp SCSC-EEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEEESC
T ss_pred CCCC-cEEEECCC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEEeee
Confidence 4555 78889986 6777777776 589999999887654332 233444321 111111110 11246999987432
Q ss_pred Cc--------ccHHHHHHhhccCCEEEEecC
Q 018094 257 AV--------HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 257 ~~--------~~~~~~~~~l~~~G~~v~~g~ 279 (361)
-. ..++.+.++|+++|.++....
T Consensus 105 ~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 135 (198)
T d2i6ga1 105 MMFLEAQTIPGLIANMQRCTKPGGYNLIVAA 135 (198)
T ss_dssp GGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred eecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 21 145667778999999887643
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.17 E-value=0.06 Score=38.88 Aligned_cols=34 Identities=26% Similarity=0.244 Sum_probs=30.6
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
..++++|+|+|.+|+=.++.++.+|.+|+++.++
T Consensus 19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 19 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence 4567999999999999999999999999999754
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=93.14 E-value=0.27 Score=38.15 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=60.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc---
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 259 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~--- 259 (361)
.+.+|.|+|.|.+|...+++++.+|.+|+..++...... ... ....+ +.++....|++.-+..-..
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----~~~---~~~~~---l~ell~~sDii~i~~plt~~T~ 111 (188)
T d1sc6a1 43 RGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL-----GNA---TQVQH---LSDLLNMSDVVSLHVPENPSTK 111 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC-----TTC---EECSC---HHHHHHHCSEEEECCCSSTTTT
T ss_pred cceEEEEeecccchhhhhhhcccccceEeeccccccchh-----hhh---hhhhh---HHHHHhhccceeecccCCcchh
Confidence 578999999999999999999999999999987543210 011 11222 2233334788888755322
Q ss_pred --cHHHHHHhhccCCEEEEecCC
Q 018094 260 --PLMPLIGLLKSQGKLVLVGAP 280 (361)
Q Consensus 260 --~~~~~~~~l~~~G~~v~~g~~ 280 (361)
.-...++.|+++..+|.++..
T Consensus 112 ~li~~~~l~~mk~~a~lIN~aRG 134 (188)
T d1sc6a1 112 NMMGAKEISLMKPGSLLINASRG 134 (188)
T ss_dssp TCBCHHHHHHSCTTEEEEECSCS
T ss_pred hhccHHHHhhCCCCCEEEEcCcH
Confidence 124678889999999998753
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.09 E-value=0.58 Score=34.61 Aligned_cols=74 Identities=19% Similarity=0.169 Sum_probs=47.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcC------C-cEEecCCCHHHHHHhcCCccEEE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG------A-DSFLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g------~-~~v~~~~~~~~~~~~~~g~d~vi 252 (361)
+.+.+|.|+|+|.+|...+..+...+. ++++++..+++....+..+. . ...+...+. +...+.|+|+
T Consensus 4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----~~l~daDvvv 79 (148)
T d1ldna1 4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV 79 (148)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----HHhccceeEE
Confidence 456789999999999988888877664 78888887765332222221 1 111111221 2245799999
Q ss_pred EcCCCcc
Q 018094 253 DTVSAVH 259 (361)
Q Consensus 253 d~~g~~~ 259 (361)
-++|...
T Consensus 80 itag~~~ 86 (148)
T d1ldna1 80 ICAGANQ 86 (148)
T ss_dssp ECCSCCC
T ss_pred Eeccccc
Confidence 9988753
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=93.07 E-value=0.22 Score=42.01 Aligned_cols=73 Identities=18% Similarity=0.244 Sum_probs=47.5
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCc--hhHH--HHHHHcC-CcEE-ecCCCHHHHHHhcC--CccEEEEcCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKS--EAIERLG-ADSF-LVSRDQDEMQAAMG--TMDGIIDTVS 256 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~--~~~~--~~~~~~g-~~~v-~~~~~~~~~~~~~~--g~d~vid~~g 256 (361)
+|||+|+ |-+|...+..+...|.+|+++++-. .+.. +..+..+ .+.+ .|-.+.+.+.++.. ++|+||.+++
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 6999998 9999999999988999999986321 1111 1222222 2222 23455555555543 5899999987
Q ss_pred Cc
Q 018094 257 AV 258 (361)
Q Consensus 257 ~~ 258 (361)
..
T Consensus 82 ~~ 83 (338)
T d1orra_ 82 QV 83 (338)
T ss_dssp CC
T ss_pred cc
Confidence 53
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=92.98 E-value=0.17 Score=36.74 Aligned_cols=94 Identities=19% Similarity=0.188 Sum_probs=60.5
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
+|.|+|+ |-+|++..++++..+.+++.....+.. .....+|+++|++..+. ....
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------------------~~~~~~DVvIDFS~p~~-~~~~ 57 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------------------EELDSPDVVIDFSSPEA-LPKT 57 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------------------EECSCCSEEEECSCGGG-HHHH
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------------------HHhccCCEEEEecCHHH-HHHH
Confidence 5889997 999999999999988877654322110 01135799999988766 6666
Q ss_pred HHhhccCCEEEEecCCCCC-cccChHHHhhCCcEEEeccc
Q 018094 265 IGLLKSQGKLVLVGAPEKP-LELPAFSLLMGRKIVGGSMI 303 (361)
Q Consensus 265 ~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~ 303 (361)
++.....+.=+.+|..+-. ..+....-..+.+.+.....
T Consensus 58 l~~~~~~~~p~ViGTTG~~~~~~~~i~~~ak~~pv~~a~N 97 (128)
T d1vm6a3 58 VDLCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYS 97 (128)
T ss_dssp HHHHHHHTCEEEECCCSCCHHHHHHHHHHTTTSEEEECSC
T ss_pred HHHHHhcCCCEEEEcCCCCHHHHHHHHHHHhhCCEEeeec
Confidence 6666666666777765422 22222223446677666554
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=92.96 E-value=0.16 Score=38.71 Aligned_cols=96 Identities=16% Similarity=0.268 Sum_probs=61.1
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEeCCc---hhHHHHHHH------cCCcE------E---------ecCCCHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSP---SKKSEAIER------LGADS------F---------LVSRDQDE 240 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~---~~~~~~~~~------~g~~~------v---------~~~~~~~~ 240 (361)
+|-|.|=|.+|+++...+... ..+++.+.... +....+.+- |..+. + ...+++..
T Consensus 2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~~ 81 (166)
T d2b4ro1 2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQ 81 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGGG
T ss_pred eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeCCChHH
Confidence 477889999999999988765 45888876532 223333320 11111 1 11122333
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
+.+...++|+|+||+|.-.+...+...+..+.+-|.+..+.
T Consensus 82 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 122 (166)
T d2b4ro1 82 IPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPP 122 (166)
T ss_dssp CCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred ccccccCCCEEEEecccccchhhhhhhhccCCCEEEEeccc
Confidence 33333389999999999877778888898887777776544
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=92.96 E-value=0.06 Score=44.72 Aligned_cols=95 Identities=20% Similarity=0.224 Sum_probs=61.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
.++.+||=+|+| .|..+..+++.. +.+++.++.+++....+.+...--..+. .+...+.-..+.+|+|+....-..
T Consensus 83 ~~~~~iLDiGcG-~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~-~d~~~l~~~~~sfD~v~~~~~~~~- 159 (268)
T d1p91a_ 83 DKATAVLDIGCG-EGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCV-ASSHRLPFSDTSMDAIIRIYAPCK- 159 (268)
T ss_dssp TTCCEEEEETCT-TSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEE-CCTTSCSBCTTCEEEEEEESCCCC-
T ss_pred CCCCEEEEeCCC-CcHHHHHHHHHCCCCEEEEecchHhhhhhhhccccccccee-eehhhccCCCCCEEEEeecCCHHH-
Confidence 567788888874 355566677765 6799999988877655544433222221 111111111236999997665544
Q ss_pred HHHHHHhhccCCEEEEecC
Q 018094 261 LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~ 279 (361)
+....+.|+|+|.++....
T Consensus 160 ~~e~~rvLkpgG~l~~~~p 178 (268)
T d1p91a_ 160 AEELARVVKPGGWVITATP 178 (268)
T ss_dssp HHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHhCCCcEEEEEee
Confidence 8899999999999998753
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=92.92 E-value=0.3 Score=36.96 Aligned_cols=129 Identities=14% Similarity=0.194 Sum_probs=74.9
Q ss_pred EEEEEccchHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHH--Hc----C---Cc------E-Ee--------cCCCHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIE--RL----G---AD------S-FL--------VSRDQDE 240 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~--~~----g---~~------~-v~--------~~~~~~~ 240 (361)
+|.|.|-|.+|+.+...+.... .+++.+....+. +.++- ++ | .+ . ++ ..++++.
T Consensus 3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~-~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~ 81 (166)
T d1gado1 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDA-DYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN 81 (166)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCH-HHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCH-HHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence 4778899999999999888764 588877765432 22211 11 1 11 0 11 1122233
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc--c----cChHHHhhCCcEEEecccCCHHHHHHHHH
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--E----LPAFSLLMGRKIVGGSMIGGMKETQEMID 314 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~----~~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 314 (361)
+.+-..++|+|+||+|.-.+...+...+..+-+-|.+..+..+. . ++-..+ .+. .+.....-+...+..+++
T Consensus 82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~d~~~~iV~GvN~~~~-~~~-~iiS~aSCTTnclaPv~k 159 (166)
T d1gado1 82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKY-AGQ-DIVSNASNETGYSNKVLD 159 (166)
T ss_dssp GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSSSCCBCCTTTTGGGC-CSC-SEEECCCTTHHHHHHHHH
T ss_pred CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccccccCCEEEeCcccccc-CCC-CEEEeccHHHhHHHHHHH
Confidence 33333489999999999887888888898887777776554321 1 111111 222 344444445555666665
Q ss_pred HHH
Q 018094 315 FAA 317 (361)
Q Consensus 315 ~l~ 317 (361)
.|.
T Consensus 160 vl~ 162 (166)
T d1gado1 160 LIA 162 (166)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.87 E-value=0.032 Score=42.93 Aligned_cols=99 Identities=14% Similarity=0.079 Sum_probs=64.0
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--HcCCcEE--ecCCCHHHHHHhcCCccEEEEcCC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE--RLGADSF--LVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~--~~g~~~v--~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
-.|++|+|+|- ..+|.=.+.++...|++|+...+.......... ..-...+ +.....+.+++....+|+++-.+|
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG 106 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVP 106 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccC
Confidence 47899999996 789998888888899999877655322100000 0001111 111234556655567999999999
Q ss_pred CcccHHHHHHhhccCCEEEEecCCC
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+. +..-.+.+++|..++++|...
T Consensus 107 ~p~-~~i~~d~ik~GavvIDvGi~~ 130 (171)
T d1edza1 107 SEN-YKFPTEYIKEGAVCINFACTK 130 (171)
T ss_dssp CTT-CCBCTTTSCTTEEEEECSSSC
T ss_pred CCc-cccChhhcccCceEeeccccc
Confidence 876 322335678888999998653
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.82 E-value=0.12 Score=43.84 Aligned_cols=100 Identities=20% Similarity=0.112 Sum_probs=54.1
Q ss_pred HHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHH--HHHHHcCCc---EEecCCCHHHHHHhcC
Q 018094 173 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS--EAIERLGAD---SFLVSRDQDEMQAAMG 246 (361)
Q Consensus 173 ~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~--~~~~~~g~~---~v~~~~~~~~~~~~~~ 246 (361)
.++.+...+.++++||-+|+| .|..++.+|++ |+ +|+++..++.... +..++.+.. .++.. +...+.....
T Consensus 25 ~ai~~~~~~~~~~~VLDiGcG-~G~lsl~aa~~-Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~-~~~~l~~~~~ 101 (311)
T d2fyta1 25 DFIYQNPHIFKDKVVLDVGCG-TGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKG-KIEEVHLPVE 101 (311)
T ss_dssp HHHHHCGGGTTTCEEEEETCT-TSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEES-CTTTSCCSCS
T ss_pred HHHHhccccCCcCEEEEECCC-CCHHHHHHHHc-CCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEe-eHHHhcCccc
Confidence 345555456789999999986 55666666664 76 8988887764321 222333431 12222 2111111124
Q ss_pred CccEEEEcC-C----CcccH---HH-HHHhhccCCEEE
Q 018094 247 TMDGIIDTV-S----AVHPL---MP-LIGLLKSQGKLV 275 (361)
Q Consensus 247 g~d~vid~~-g----~~~~~---~~-~~~~l~~~G~~v 275 (361)
.+|+|+-.. + .+..+ .. .-+.|+|+|+++
T Consensus 102 ~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii 139 (311)
T d2fyta1 102 KVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 139 (311)
T ss_dssp CEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence 799998521 1 11112 22 234689999886
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.78 E-value=0.48 Score=34.48 Aligned_cols=99 Identities=19% Similarity=0.123 Sum_probs=59.7
Q ss_pred EEEEEcc-chHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHH
Q 018094 186 HVGVVGL-GGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP 263 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~-~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~ 263 (361)
+|.|.|+ |-+|...++.... .+.+++......+..... ...++|++||++-... ...
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~--------------------~~~~~DvvIDFS~p~~-~~~ 59 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLL--------------------TDGNTEVVIDFTHPDV-VMG 59 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHH--------------------HTTTCSEEEECCCTTT-HHH
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhh--------------------ccccCCEEEEcccHHH-HHH
Confidence 5889997 9999998888765 466777665433221111 1236899999987665 666
Q ss_pred HHHhhccCCEEEEecCCCCC-cccCh-HHH--hhCCcEEEecccCC
Q 018094 264 LIGLLKSQGKLVLVGAPEKP-LELPA-FSL--LMGRKIVGGSMIGG 305 (361)
Q Consensus 264 ~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~--~~~~~~i~g~~~~~ 305 (361)
.++.+...|.=+.+|..+-. .++.. ..+ -.+++.+.-+.+.+
T Consensus 60 ~~~~~~~~~~~~ViGTTG~~~~~~~~l~~~~~~~~~ipil~apNfS 105 (135)
T d1yl7a1 60 NLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFT 105 (135)
T ss_dssp HHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHSCTTCEEEECSCCG
T ss_pred HHHHHHhcCCCEEEeccccchhHHHHHHHHHHhcCCCCEEEcCCcc
Confidence 66666677777777765422 12221 121 23566665554443
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=92.65 E-value=0.19 Score=43.82 Aligned_cols=31 Identities=23% Similarity=0.293 Sum_probs=28.1
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCCeEEEEe
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS 214 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~ 214 (361)
|.+|||+|+ |-+|...+..+...|.+|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 678999998 9999999999999999999986
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.62 E-value=0.11 Score=38.00 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=34.0
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
++++++++|+|+|.+|+=++..++.+|.+|+++.+.+.
T Consensus 32 ~~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 32 LIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred hccCCEEEEECCchHHHHHHHHHHhhCcceeeeeeccc
Confidence 46788999999999999999999999999999998653
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.60 E-value=0.058 Score=45.65 Aligned_cols=36 Identities=33% Similarity=0.364 Sum_probs=31.8
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
...++|+|+|+|..|+.++..++..|.+|+++...+
T Consensus 28 ~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 28 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456789999999999999999999999999998653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=92.59 E-value=0.18 Score=41.72 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=50.4
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHH-----HHH---HcCCcEEe-cCCCHHHHHHhcCCccEEEEc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSE-----AIE---RLGADSFL-VSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~-----~~~---~~g~~~v~-~~~~~~~~~~~~~g~d~vid~ 254 (361)
++|||+|+ |.+|...+..+...|.+|++++++...... ..+ ..+.+.+. |..+.....+...+.+.++.+
T Consensus 4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~ 83 (307)
T d1qyca_ 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST 83 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence 56999998 999999999999999999999986543211 111 12333322 334445555555678888888
Q ss_pred CCCcc
Q 018094 255 VSAVH 259 (361)
Q Consensus 255 ~g~~~ 259 (361)
.+...
T Consensus 84 ~~~~~ 88 (307)
T d1qyca_ 84 VGSLQ 88 (307)
T ss_dssp CCGGG
T ss_pred ccccc
Confidence 77643
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.59 E-value=0.9 Score=33.35 Aligned_cols=71 Identities=15% Similarity=0.246 Sum_probs=45.0
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcC-CcE---EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-ADS---FLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g-~~~---v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
+|.|+|| |.+|...+.++...+. ++++++.++.+.. . ..+- ... .-..-......+...+.|+|+-++|.+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~-a-~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV-A-ADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH-H-HHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh-h-HHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence 6889997 9999999999998876 7888877654432 2 2332 110 000111222334457899999998863
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.56 E-value=0.11 Score=37.63 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=31.9
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
..++++|+|+|.+|+=++..++.+|.+|+++.+.+
T Consensus 21 ~pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 21 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cCCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence 34789999999999999999999999999999875
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.42 E-value=0.26 Score=37.96 Aligned_cols=89 Identities=17% Similarity=0.242 Sum_probs=56.0
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEE-------ecC---CCHHHHHHhcCCccEEEEcC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSF-------LVS---RDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v-------~~~---~~~~~~~~~~~g~d~vid~~ 255 (361)
+|.|+|+|..|.+.+..+...|.+|++..+..+. +.++.+...+. +.. ...+...+.....|+||.++
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 5789999999999999998889999998875442 11222211100 000 01233455566899999999
Q ss_pred CCcccHHHHHHhhccC---CEEEEe
Q 018094 256 SAVHPLMPLIGLLKSQ---GKLVLV 277 (361)
Q Consensus 256 g~~~~~~~~~~~l~~~---G~~v~~ 277 (361)
.... ++..++-+++. ..++.+
T Consensus 80 ps~~-~~~~~~~l~~~l~~~~ii~~ 103 (180)
T d1txga2 80 STDG-VLPVMSRILPYLKDQYIVLI 103 (180)
T ss_dssp CGGG-HHHHHHHHTTTCCSCEEEEC
T ss_pred chhh-hHHHHHhhccccccceeccc
Confidence 8765 66666655443 444444
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=92.35 E-value=0.09 Score=38.07 Aligned_cols=36 Identities=14% Similarity=0.187 Sum_probs=32.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
+.+++++|+|+|.+|+=.++.++.+|.+|+++.+.+
T Consensus 24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 24 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence 456899999999999999999999999999998765
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.35 E-value=0.26 Score=41.87 Aligned_cols=102 Identities=13% Similarity=0.165 Sum_probs=69.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHHc---CCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAIERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~-~g~-~Vi~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
+...++.|+|+|..+...++.+.. +.. +|.+..++.++...+++++ +.....+ .. +...+.|+|+-++.
T Consensus 123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~--~~----~a~~~aDiV~taT~ 196 (320)
T d1omoa_ 123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ--PA----EEASRCDVLVTTTP 196 (320)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC--CH----HHHTSSSEEEECCC
T ss_pred CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc--hh----hhhccccEEEEecc
Confidence 456788999999999888887765 565 8999999988776665543 3332221 21 22357999999887
Q ss_pred CcccHHHHHHhhccCCEEEEecCCCCC-cccChHH
Q 018094 257 AVHPLMPLIGLLKSQGKLVLVGAPEKP-LELPAFS 290 (361)
Q Consensus 257 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~ 290 (361)
+..-+ --.+.++++-.+..+|..... .+++...
T Consensus 197 s~~P~-~~~~~l~~G~hv~~iGs~~p~~~Eld~~~ 230 (320)
T d1omoa_ 197 SRKPV-VKAEWVEEGTHINAIGADGPGKQELDVEI 230 (320)
T ss_dssp CSSCC-BCGGGCCTTCEEEECSCCSTTCCCBCHHH
T ss_pred Ccccc-cchhhcCCCCeEeecCCccccccccCHHH
Confidence 75422 123468999999999986543 4566553
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.35 E-value=0.09 Score=37.35 Aligned_cols=35 Identities=26% Similarity=0.292 Sum_probs=31.5
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
-+++++|+|+|.+|+=+++.++.+|.+|+++.+.+
T Consensus 20 ~p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 20 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHhhcccceEEEeeec
Confidence 45789999999999999999999999999998764
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=92.33 E-value=0.94 Score=34.32 Aligned_cols=130 Identities=15% Similarity=0.201 Sum_probs=74.5
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHH--HcC-------Cc------E---------EecCCCHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIE--RLG-------AD------S---------FLVSRDQDE 240 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~--~~g-------~~------~---------v~~~~~~~~ 240 (361)
+|-|.|-|.+|+.+...+... ..+++.+-...+ .+.++. ++. .+ . +....+++.
T Consensus 3 kIgINGfGRIGR~v~R~~l~~~~~~ivaINd~~d-~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p~~ 81 (171)
T d3cmco1 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDLTD-ANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPEN 81 (171)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEECSSC-HHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred EEEEECCCHHHHHHHHHHhhCCCcEEEEEcCCCC-HHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCCHHH
Confidence 477889999999988777654 458877776543 222211 111 11 0 111122233
Q ss_pred HHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCc--cc----ChHHHhhCCcEEEecccCCHHHHHHHHH
Q 018094 241 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPL--EL----PAFSLLMGRKIVGGSMIGGMKETQEMID 314 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~----~~~~~~~~~~~i~g~~~~~~~~~~~~~~ 314 (361)
+.+-..++|+|+||+|.-.+...+...+..+-+-|.+..+.... ++ +-..+-.+.-++.....-+...+..+++
T Consensus 82 i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~~d~~~t~V~GvN~~~~~~~~~~iIS~aSCTtn~laPv~k 161 (171)
T d3cmco1 82 LAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKNEDITIVMGVNQDKYDPKAHHVISNASNETGYSHRVVD 161 (171)
T ss_dssp CCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSCSEECCTTTSGGGCCTTTCCEEECCCTTHHHHHHHHH
T ss_pred ccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEecccccccceeeeccchheecCCCCeEEEehhHHHhHHHHHHH
Confidence 33333379999999999887888888888887666665544221 11 1122211334455555556666666666
Q ss_pred HH
Q 018094 315 FA 316 (361)
Q Consensus 315 ~l 316 (361)
.|
T Consensus 162 vl 163 (171)
T d3cmco1 162 LA 163 (171)
T ss_dssp HH
T ss_pred HH
Confidence 55
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=92.24 E-value=0.07 Score=43.22 Aligned_cols=35 Identities=31% Similarity=0.321 Sum_probs=31.3
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 219 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~ 219 (361)
+++||.|+ +++|.+.++.+...|++|++++++.+.
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 67899997 999999999999999999999987654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=92.23 E-value=0.072 Score=41.73 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=54.8
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc-----------EEecCCCHHHHHHhcCCccEEEE
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD-----------SFLVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~-----------~v~~~~~~~~~~~~~~g~d~vid 253 (361)
.+|.|+|+|..|.+.+.++...|.+|++..++++...++.++ +-+ .+... ..+.+...+.|++|-
T Consensus 8 ~KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~-~~n~~yl~~~~l~~~i~~t---~~l~~a~~~ad~iii 83 (189)
T d1n1ea2 8 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK-RENVLFLKGVQLASNITFT---SDVEKAYNGAEIILF 83 (189)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH-TBCTTTSTTCBCCTTEEEE---SCHHHHHTTCSCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc-ccccccccccccccccccc---hhhhhccCCCCEEEE
Confidence 369999999999999999988888999999987766555322 210 11111 123444567899999
Q ss_pred cCCCcccHHHHHHhhc
Q 018094 254 TVSAVHPLMPLIGLLK 269 (361)
Q Consensus 254 ~~g~~~~~~~~~~~l~ 269 (361)
++.... ++..++.++
T Consensus 84 avPs~~-~~~~~~~~~ 98 (189)
T d1n1ea2 84 VIPTQF-LRGFFEKSG 98 (189)
T ss_dssp CSCHHH-HHHHHHHHC
T ss_pred cCcHHH-HHHHHHHHH
Confidence 988764 666665443
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=92.20 E-value=0.068 Score=38.61 Aligned_cols=37 Identities=22% Similarity=0.246 Sum_probs=33.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
+..++++|+|+|.+|+=+++.++.+|.+|+++.+.+.
T Consensus 23 ~~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 23 EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred ccCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEccc
Confidence 4568899999999999999999999999999987753
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=92.13 E-value=0.027 Score=42.42 Aligned_cols=83 Identities=16% Similarity=0.086 Sum_probs=52.1
Q ss_pred EEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHHHHhh
Q 018094 189 VVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLL 268 (361)
Q Consensus 189 I~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l 268 (361)
++|+|.+|.+.+..++..+..+.+..++.++..++.++++... .+. .+.....|+||-|+.... +...+..+
T Consensus 4 fIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~-~~~------~~~~~~~DiVil~v~d~~-i~~v~~~l 75 (153)
T d2i76a2 4 FVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKA-ATL------EKHPELNGVVFVIVPDRY-IKTVANHL 75 (153)
T ss_dssp EESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCC-CSS------CCCCC---CEEECSCTTT-HHHHHTTT
T ss_pred EEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccc-cch------hhhhccCcEEEEeccchh-hhHHHhhh
Confidence 5799999999887775544344578888888888877766432 111 123346899999998765 77777778
Q ss_pred cc-CCEEEEecC
Q 018094 269 KS-QGKLVLVGA 279 (361)
Q Consensus 269 ~~-~G~~v~~g~ 279 (361)
+. +..++.+..
T Consensus 76 ~~~~~ivi~~s~ 87 (153)
T d2i76a2 76 NLGDAVLVHCSG 87 (153)
T ss_dssp CCSSCCEEECCS
T ss_pred cccceeeeeccc
Confidence 64 445556643
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.96 E-value=0.21 Score=42.65 Aligned_cols=74 Identities=15% Similarity=0.099 Sum_probs=47.9
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch----hHHHHH--HHcCCcEE-ecCCCHHHHHHhc--CCccEEEEc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS----KKSEAI--ERLGADSF-LVSRDQDEMQAAM--GTMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~----~~~~~~--~~~g~~~v-~~~~~~~~~~~~~--~g~d~vid~ 254 (361)
+.|||+|+ |-+|...+..+...|.+|+++++... ...... ..-+.+.+ .|-.+.+.+..+. .++|+||.+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 57899998 99999999999999999999864221 111111 11123322 2445555555543 389999999
Q ss_pred CCCc
Q 018094 255 VSAV 258 (361)
Q Consensus 255 ~g~~ 258 (361)
++..
T Consensus 82 Aa~~ 85 (347)
T d1z45a2 82 AGLK 85 (347)
T ss_dssp CSCC
T ss_pred cccc
Confidence 8753
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.93 E-value=0.25 Score=43.32 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=64.2
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHH---HHH-------cCC----cEEecCC
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA---IER-------LGA----DSFLVSR 236 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~---~~~-------~g~----~~v~~~~ 236 (361)
...+.. ..+++|+++|=+|+| +|..+.++|+..|+ +|+.++-++.....+ +++ +|. .......
T Consensus 206 ~~Il~~-l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~ 283 (406)
T d1u2za_ 206 SDVYQQ-CQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 283 (406)
T ss_dssp HHHHHH-TTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred HHHHHH-hCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeee
Confidence 344544 458999988778875 68888899999886 899999886543222 111 121 1111111
Q ss_pred ---CHHHHHHhcCCccEEEEcCC--C---cccHHHHHHhhccCCEEEEec
Q 018094 237 ---DQDEMQAAMGTMDGIIDTVS--A---VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 237 ---~~~~~~~~~~g~d~vid~~g--~---~~~~~~~~~~l~~~G~~v~~g 278 (361)
..+........+|+++-... . ...+....+.|+|||+++..-
T Consensus 284 ~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~ 333 (406)
T d1u2za_ 284 SFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 333 (406)
T ss_dssp CSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred chhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence 12333344456888885321 1 123567788899999999864
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=91.90 E-value=0.17 Score=43.57 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=45.0
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHHc---CCcE-E--ecCCCHHHHHHhcC--CccE
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-----KSEAIERL---GADS-F--LVSRDQDEMQAAMG--TMDG 250 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~-----~~~~~~~~---g~~~-v--~~~~~~~~~~~~~~--g~d~ 250 (361)
+.|||+|+ |-+|...+..+...|.+|+++++.... ..++.+.. .... + .|-.+.+.+.+... .+|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 57899997 999999999999999999999985421 11111110 1111 1 12345556655544 6799
Q ss_pred EEEcCCC
Q 018094 251 IIDTVSA 257 (361)
Q Consensus 251 vid~~g~ 257 (361)
||.+++.
T Consensus 82 v~h~aa~ 88 (357)
T d1db3a_ 82 VYNLGAM 88 (357)
T ss_dssp EEECCCC
T ss_pred EEEeecc
Confidence 9999875
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=91.66 E-value=0.42 Score=36.30 Aligned_cols=96 Identities=16% Similarity=0.246 Sum_probs=59.6
Q ss_pred EEEEEccchHHHHHHHHHHHC---CCeEEEEeCCch--hHHHHHH------HcCCc------E---------EecCCCHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM---GVKVTVISTSPS--KKSEAIE------RLGAD------S---------FLVSRDQD 239 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~---g~~Vi~~~~~~~--~~~~~~~------~~g~~------~---------v~~~~~~~ 239 (361)
+|.|.|-|-+|+.+...+... ..+|+.+....+ ....+.+ ++..+ . ++..++++
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p~ 81 (169)
T d1hdgo1 2 RVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDPS 81 (169)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred EEEEECCChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCChh
Confidence 588999999999998877642 468887765432 1222222 01111 1 11112223
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
.+.+..-++|+||||+|.-.+...+...+..+-+-|.+..+.
T Consensus 82 ~i~W~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~ 123 (169)
T d1hdgo1 82 KLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPA 123 (169)
T ss_dssp GSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred hCCccccCCCEEEEecceeccccchhhhccCCCceEEEeccc
Confidence 333322379999999999877888888898887666665554
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=91.64 E-value=0.34 Score=41.28 Aligned_cols=73 Identities=18% Similarity=0.156 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHHc-CCcEEe-cCCC-HHHHHHhcCCccEEEEcCC
Q 018094 183 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK--SEAIERL-GADSFL-VSRD-QDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 183 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~--~~~~~~~-g~~~v~-~~~~-~~~~~~~~~g~d~vid~~g 256 (361)
+.++|||+|+ |.+|...+..+...|.+|++++++..+. ..+ ..+ |++.+. |..+ .+.+..+..+.|.++....
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~-~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-HTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhh-cccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 4578999998 9999999999999999999999876543 222 222 333322 2222 4456666678888887644
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.64 E-value=0.11 Score=43.78 Aligned_cols=35 Identities=26% Similarity=0.378 Sum_probs=30.9
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
++..+|+|+|+|..|+.|+..++..|.+|++...+
T Consensus 3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~ 37 (449)
T d2dw4a2 3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 37 (449)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 45567999999999999999999999999988765
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.61 E-value=0.067 Score=44.62 Aligned_cols=33 Identities=15% Similarity=0.385 Sum_probs=29.9
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
.|+|+|+|+.|++++..++..|.+|+++...++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 489999999999999999999999999987653
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=91.59 E-value=0.2 Score=40.75 Aligned_cols=35 Identities=29% Similarity=0.506 Sum_probs=32.3
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
-.|.+|+|.|.|.+|..+++++...|++|+.+...
T Consensus 29 l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 29 IEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence 47899999999999999999999999999988865
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.58 E-value=0.27 Score=41.56 Aligned_cols=74 Identities=12% Similarity=0.114 Sum_probs=46.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch-----hHHHH---HHHcCC-c-EE--ecCCCHHHHHHhc--CCcc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-----KKSEA---IERLGA-D-SF--LVSRDQDEMQAAM--GTMD 249 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~-----~~~~~---~~~~g~-~-~v--~~~~~~~~~~~~~--~g~d 249 (361)
+++||+|+ |-+|...+..+...|.+|+++++... +...+ ...... . .+ .|..+.+.+.+.. .++|
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D 81 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 81 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence 57899998 99999999999999999999997532 11111 011111 1 11 1333444444432 3789
Q ss_pred EEEEcCCCc
Q 018094 250 GIIDTVSAV 258 (361)
Q Consensus 250 ~vid~~g~~ 258 (361)
+|+.+++..
T Consensus 82 ~Vih~Aa~~ 90 (339)
T d1n7ha_ 82 EVYNLAAQS 90 (339)
T ss_dssp EEEECCSCC
T ss_pred hhhhccccc
Confidence 999998763
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=91.53 E-value=0.11 Score=42.38 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=29.8
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
+.|||.|+ +++|.+.++.+...|++|++++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 35788997 99999999999999999999987754
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=91.50 E-value=0.32 Score=38.83 Aligned_cols=91 Identities=15% Similarity=0.167 Sum_probs=58.4
Q ss_pred EEEEEccchHHH-HHHHHHHHC-CCeEEEEeC-CchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 186 HVGVVGLGGLGH-VAVKFAKAM-GVKVTVIST-SPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 186 ~VlI~Gag~vG~-~a~~la~~~-g~~Vi~~~~-~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
+|.|+|+|.+|. ..+...+.. +.+++.+++ +.++...+++++|.+ .+..+.+.+.+.. ...+|+|+-++....-
T Consensus 35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~-~~~iD~V~I~tp~~~H 113 (221)
T d1h6da1 35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAK-DPKIDAVYIILPNSLH 113 (221)
T ss_dssp EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGG-CTTCCEEEECSCGGGH
T ss_pred EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcc-cccceeeeeccchhhh
Confidence 678889999986 344444443 678886654 556777888888863 2333444332211 2379999998887654
Q ss_pred HHHHHHhhccCCEEEEec
Q 018094 261 LMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g 278 (361)
...+.+++.. |+-+.+.
T Consensus 114 ~~~~~~al~~-gk~v~~E 130 (221)
T d1h6da1 114 AEFAIRAFKA-GKHVMCE 130 (221)
T ss_dssp HHHHHHHHHT-TCEEEEC
T ss_pred hhHHHHhhhc-chhhhcC
Confidence 6677777765 4566664
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.42 E-value=0.11 Score=42.61 Aligned_cols=33 Identities=24% Similarity=0.322 Sum_probs=28.8
Q ss_pred EEEEEccchHHHHHHHHHHHCCC-eEEEEeCCch
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS 218 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~ 218 (361)
.|+|+|+|..|++++.+++..|. +|.++.+.++
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 58999999999999999999996 8888777543
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=91.39 E-value=0.12 Score=43.98 Aligned_cols=34 Identities=24% Similarity=0.272 Sum_probs=30.7
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
.++|+|+|||..|+.++..+...|.+|.++..++
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4689999999999999999999999999988764
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=91.37 E-value=0.12 Score=42.29 Aligned_cols=100 Identities=20% Similarity=0.151 Sum_probs=58.1
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCch--hHHHHHHHcCCc-EE-ecCCCHHHHHHhcCCccEE
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPS--KKSEAIERLGAD-SF-LVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~--~~~~~~~~~g~~-~v-~~~~~~~~~~~~~~g~d~v 251 (361)
..-.+....+||=+|+| .|..++.+++.. +.++++++.... ...+..++.|.. .+ +...+ .......++|+|
T Consensus 74 ~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~rv~~~~~D--~~~~~~~~~D~v 150 (253)
T d1tw3a2 74 AAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGD--FFEPLPRKADAI 150 (253)
T ss_dssp HHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECC--TTSCCSSCEEEE
T ss_pred hhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCHHHHHHHHHHHHHhhcccchhhcccc--chhhcccchhhe
Confidence 33445777889888875 567788888887 568888886431 111222333431 11 11111 111123478998
Q ss_pred EEcCCCc--------ccHHHHHHhhccCCEEEEecC
Q 018094 252 IDTVSAV--------HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 252 id~~g~~--------~~~~~~~~~l~~~G~~v~~g~ 279 (361)
+-..--. ..+..+.+.|+|+|+++.+..
T Consensus 151 ~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~ 186 (253)
T d1tw3a2 151 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 186 (253)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred eeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence 8543211 125678889999999998754
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.34 E-value=0.12 Score=44.20 Aligned_cols=93 Identities=22% Similarity=0.130 Sum_probs=49.4
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchh--HHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK--KSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~--~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+.+|++||-+|+| .|.++..+|+ .|+ +|+++..++.. ..+..++.+.. ..+...+...+......+|+|+...
T Consensus 36 ~~~~~~VLDlGcG-tG~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~D~i~se~ 113 (328)
T d1g6q1_ 36 LFKDKIVLDVGCG-TGILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW 113 (328)
T ss_dssp HHTTCEEEEETCT-TSHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred cCCcCEEEEeCCC-CCHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhccCcccceeEEEEEe
Confidence 4578999999986 3555554444 576 88888876421 12223344432 2122222121111123689987632
Q ss_pred C-----Ccc----cHHHHHHhhccCCEEE
Q 018094 256 S-----AVH----PLMPLIGLLKSQGKLV 275 (361)
Q Consensus 256 g-----~~~----~~~~~~~~l~~~G~~v 275 (361)
- ... .+...-+.|+|+|+++
T Consensus 114 ~~~~~~~e~~~~~~~~a~~r~LkpgG~ii 142 (328)
T d1g6q1_ 114 MGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred cceeeccchhHHHHHHHHHhccCCCeEEE
Confidence 2 111 1223346799999885
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.32 E-value=0.12 Score=39.36 Aligned_cols=35 Identities=37% Similarity=0.482 Sum_probs=29.4
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSP 217 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~ 217 (361)
.|++|+|+|+|.+|+.+++.++.++ .+|+++.+.+
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4789999999999999999998876 4888887654
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=91.27 E-value=0.69 Score=34.65 Aligned_cols=129 Identities=16% Similarity=0.127 Sum_probs=75.3
Q ss_pred EEEEEccchHHHH-HHHHHHHC-CCeEEEEeC-CchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 186 HVGVVGLGGLGHV-AVKFAKAM-GVKVTVIST-SPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 186 ~VlI~Gag~vG~~-a~~la~~~-g~~Vi~~~~-~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
+|.|+|.|.+|.- .+..++.. +.+++.+++ +.++..++.++++... +.+.+. +...+|+|+.++....-..
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~~~~~---l~~~~D~V~I~tp~~~h~~ 76 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---ADSLSS---LAASCDAVFVHSSTASHFD 76 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CSSHHH---HHTTCSEEEECSCTTHHHH
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cccchh---hhhhcccccccccchhccc
Confidence 4788999999864 56666655 668776664 4556677778888652 223232 3356999999988765466
Q ss_pred HHHHhhccCCEEEEecCCCCCcccChHH-------HhhCCcEE-EecccC-CHHHHHHHHHHHHcCCCcee
Q 018094 263 PLIGLLKSQGKLVLVGAPEKPLELPAFS-------LLMGRKIV-GGSMIG-GMKETQEMIDFAAKHNIRAD 324 (361)
Q Consensus 263 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~-------~~~~~~~i-~g~~~~-~~~~~~~~~~~l~~~~l~~~ 324 (361)
.+..+++.+ .-+.+--+ +..+... .-.+++.+ .++... .+...+.+.+++.+|.+...
T Consensus 77 ~~~~al~~g-k~V~~EKP---la~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~ig~~ 143 (164)
T d1tlta1 77 VVSTLLNAG-VHVCVDKP---LAENLRDAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTVPQT 143 (164)
T ss_dssp HHHHHHHTT-CEEEEESS---SCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCCCTT
T ss_pred ccccccccc-ceeecccc---ccCCHHHHHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCCCCE
Confidence 666666665 55666432 2222211 12233333 333222 22334567788888876543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=91.26 E-value=0.12 Score=44.08 Aligned_cols=73 Identities=11% Similarity=0.035 Sum_probs=46.6
Q ss_pred EEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcCCcEEe-cCCC-HHHHHHhcCCccEEEEcCCCc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLGADSFL-VSRD-QDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~-~~~~~~~~~g~d~vid~~g~~ 258 (361)
+|||+|+ |-+|...++.+...| .+|++++....+...+.+.-..+.+. |-.+ .+..+....++|+||.+++-.
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~ 78 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 78 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence 5899998 999999998888888 58999887665543332111122221 2222 233333445799999988863
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=91.05 E-value=0.2 Score=37.62 Aligned_cols=75 Identities=15% Similarity=0.141 Sum_probs=46.8
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHc-------CCcEEecCCCHHHHHHhcCCccEEEE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~g~d~vid 253 (361)
++..+|.|+|+|.+|...+.++...+. ++++++.++++....+..+ +....+... ....+...+.|+|+-
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~~~~~~adiVvi 82 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYEAALTGADCVIV 82 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHHHHHTTCSEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--CchhhhhcCCCeEEE
Confidence 556789999999999888887777675 8888887766543332222 211111111 111233467899999
Q ss_pred cCCCc
Q 018094 254 TVSAV 258 (361)
Q Consensus 254 ~~g~~ 258 (361)
++|..
T Consensus 83 tag~~ 87 (154)
T d1pzga1 83 TAGLT 87 (154)
T ss_dssp CCSCS
T ss_pred ecccc
Confidence 88753
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=90.98 E-value=0.11 Score=42.12 Aligned_cols=32 Identities=28% Similarity=0.277 Sum_probs=29.0
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
|+|+|+|+.|++++..+...|.+|+++...+.
T Consensus 5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 88999999999999999999999999987654
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=90.91 E-value=0.11 Score=42.38 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.0
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCchh
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK 219 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~ 219 (361)
|+|+|+|+.|++++..|...|.+|.++...+.-
T Consensus 7 ViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 7 NIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 889999999999999999999999999987653
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=90.85 E-value=1.8 Score=31.61 Aligned_cols=71 Identities=15% Similarity=0.198 Sum_probs=45.2
Q ss_pred CEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHc-------CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
.+|.|+|+|.+|..++..+...+. ++++++.++++....+..+ +...+....+. +...+.|+|+-++
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~----~~~~daDvVVita 77 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP----EICRDADMVVITA 77 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG----GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCH----HHhhCCcEEEEec
Confidence 468889999999999888887775 7888887766532221111 12222222221 2234689999999
Q ss_pred CCcc
Q 018094 256 SAVH 259 (361)
Q Consensus 256 g~~~ 259 (361)
|.+.
T Consensus 78 G~~~ 81 (143)
T d1llda1 78 GPRQ 81 (143)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8753
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=90.81 E-value=0.53 Score=38.04 Aligned_cols=33 Identities=36% Similarity=0.640 Sum_probs=28.0
Q ss_pred CCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~ 216 (361)
..+|+|+|+|++|..++..+...|. ++++++..
T Consensus 30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence 4689999999999999999999999 67666643
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.80 E-value=0.14 Score=43.43 Aligned_cols=99 Identities=20% Similarity=0.144 Sum_probs=52.9
Q ss_pred HHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhH--HHHHHHcCCc---EEecCCCHHHHHHhcCC
Q 018094 174 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK--SEAIERLGAD---SFLVSRDQDEMQAAMGT 247 (361)
Q Consensus 174 ~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~--~~~~~~~g~~---~v~~~~~~~~~~~~~~g 247 (361)
++.+...+.+|++||-+|+|. |.+++.+|+ .|+ +|+.+..++... .+..++.+.. .++.... ..+....+.
T Consensus 24 ai~~~~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~-~~~~~~~~~ 100 (316)
T d1oria_ 24 SMFHNRHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKV-EEVELPVEK 100 (316)
T ss_dssp HHHTCHHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCT-TTCCCSSSC
T ss_pred HHHhccccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccH-HHcccccce
Confidence 343333346899999999864 666666666 576 798888765321 1222333432 1222211 111111236
Q ss_pred ccEEEEcCCC-----cc----cHHHHHHhhccCCEEE
Q 018094 248 MDGIIDTVSA-----VH----PLMPLIGLLKSQGKLV 275 (361)
Q Consensus 248 ~d~vid~~g~-----~~----~~~~~~~~l~~~G~~v 275 (361)
+|+|+...-. +. .+...-+.|+|+|+++
T Consensus 101 ~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii 137 (316)
T d1oria_ 101 VDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 137 (316)
T ss_dssp EEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence 8998753222 11 1233456899999886
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.80 E-value=0.18 Score=36.13 Aligned_cols=36 Identities=17% Similarity=0.157 Sum_probs=32.0
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
+.+++++|+|+|.+|+=++..++.+|.+|+++.+.+
T Consensus 30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 30 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred hcCCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence 455789999999999999999999999999998764
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=90.77 E-value=2.1 Score=31.91 Aligned_cols=73 Identities=14% Similarity=0.226 Sum_probs=48.1
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHc-------CCcEEecCCCHHHHHHhcCCccEEE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~g~d~vi 252 (361)
.+..+|.|+|+|.+|...+..+...|. ++++++.++++....+..+ +...++...+. +...+.|+|+
T Consensus 18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~----~~~~~adiVV 93 (160)
T d1i0za1 18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY----SVTANSKIVV 93 (160)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG----GGGTTCSEEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch----hhcccccEEE
Confidence 345689999999999999999998886 7888887766542222222 11222222221 2235799999
Q ss_pred EcCCCc
Q 018094 253 DTVSAV 258 (361)
Q Consensus 253 d~~g~~ 258 (361)
-++|..
T Consensus 94 itAg~~ 99 (160)
T d1i0za1 94 VTAGVR 99 (160)
T ss_dssp ECCSCC
T ss_pred EecCCc
Confidence 998875
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=90.69 E-value=0.12 Score=39.76 Aligned_cols=30 Identities=23% Similarity=0.448 Sum_probs=27.5
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVIST 215 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~ 215 (361)
.|+|+|+|+.|+.++..+...|.+|.++.+
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~~v~iie~ 32 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred cEEEECcCHHHHHHHHHHHHcCCeEEEEEE
Confidence 388999999999999999999999999875
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=90.55 E-value=1.9 Score=34.30 Aligned_cols=130 Identities=12% Similarity=0.072 Sum_probs=74.0
Q ss_pred CEEEEEccch----HHHHHHHHHHHC--CCeEEEEeCC-chhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 185 MHVGVVGLGG----LGHVAVKFAKAM--GVKVTVISTS-PSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 185 ~~VlI~Gag~----vG~~a~~la~~~--g~~Vi~~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
=+|.|+|.|. ++...+..++.. +++++.+++. .++..++.++++....-.+.+.+.+.+ ...+|+|+.++..
T Consensus 17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~iD~V~i~tp~ 95 (237)
T d2nvwa1 17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQ-YKDIDMIVVSVKV 95 (237)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHH-CTTCSEEEECSCH
T ss_pred eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhccc-ccccceeeccCCC
Confidence 3578888765 445455555554 5688866554 445667778888643333444443322 2479999999887
Q ss_pred cccHHHHHHhhccC-----CEEEEecCCCCCcccChH------HHh-hC-CcEE-EecccCCHHHHHHHHHHHHc
Q 018094 258 VHPLMPLIGLLKSQ-----GKLVLVGAPEKPLELPAF------SLL-MG-RKIV-GGSMIGGMKETQEMIDFAAK 318 (361)
Q Consensus 258 ~~~~~~~~~~l~~~-----G~~v~~g~~~~~~~~~~~------~~~-~~-~~~i-~g~~~~~~~~~~~~~~~l~~ 318 (361)
..-......+|..| +.-|.+-- ++..+.. .+. .+ ++.+ .++.......+..+.+++.+
T Consensus 96 ~~h~~~~~~al~aG~~~~~~k~V~~EK---Pla~~~~e~~~l~~~a~~~~~~~~~v~~~~R~~p~~~~~k~~i~~ 167 (237)
T d2nvwa1 96 PEHYEVVKNILEHSSQNLNLRYLYVEW---ALAASVQQAEELYSISQQRANLQTIICLQGRYNSVVGNILRIYES 167 (237)
T ss_dssp HHHHHHHHHHHHHSSSCSSCCEEEEES---SSSSSHHHHHHHHHHHHTCTTCEEEEECGGGCCHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHhcccccCCceEEEec---cccCCHHHHHHHHHHHhhcCCeeEEEEECCcCCHHHHHHHHHHHh
Confidence 65566677777654 46777743 3322221 122 23 3443 45544433445555555543
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=90.52 E-value=1.4 Score=35.27 Aligned_cols=122 Identities=20% Similarity=0.176 Sum_probs=64.8
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHH-HHCCCeEEEEeCCc-----------hhHHHHHHHcCCcEEecCCCH---H
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFA-KAMGVKVTVISTSP-----------SKKSEAIERLGADSFLVSRDQ---D 239 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la-~~~g~~Vi~~~~~~-----------~~~~~~~~~~g~~~v~~~~~~---~ 239 (361)
+.....--.|.+|+|.|.|.+|..+++.+ +..|++|+.+.... +...+..++.+.. ..+... +
T Consensus 22 ~~~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd~~G~i~~~~Gld~~~l~~~~~~~~~~--~~~~~~~~~~ 99 (234)
T d1b26a1 22 MDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEHGTV--VTYPKGERIT 99 (234)
T ss_dssp HHHTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEETTEEEECTTCCCHHHHHHHHHHSSCS--TTCSSCEEEC
T ss_pred HHHcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeecCCCcEEeccccchHHHHHHHHhhcce--eccccceeec
Confidence 33333224689999999999999999887 56899999887542 1222232222210 111110 0
Q ss_pred HHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCCcccChH-HHhhCCcEEEec
Q 018094 240 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKPLELPAF-SLLMGRKIVGGS 301 (361)
Q Consensus 240 ~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~g~ 301 (361)
.-.-..-++|+.+=|+-....-..-...++. ++|.=|. ..+.+.... .|..|++.+.+-
T Consensus 100 ~~~~~~~~~DI~~PcA~~~~I~~~~a~~l~~--~~I~e~A-N~p~t~~a~~~L~~rgI~~~PD 159 (234)
T d1b26a1 100 NEELLELDVDILVPAALEGAIHAGNAERIKA--KAVVEGA-NGPTTPEADEILSRRGILVVPD 159 (234)
T ss_dssp HHHHHTSCCSEEEECSCTTCBCHHHHTTCCC--SEEECCS-SSCBCHHHHHHHHHTTCEEECH
T ss_pred cccccccccceeecchhcccccHHHHHHhhh--ceEeecC-CCCCCHHHHHHHHHCCeEEech
Confidence 0011223788888877665534445555543 3333222 222322222 256677776653
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.51 E-value=0.13 Score=41.15 Aligned_cols=31 Identities=26% Similarity=0.198 Sum_probs=28.7
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|+|+|+|..|+.++..+...|.+|.++..++
T Consensus 8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 8899999999999999999999999999865
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.50 E-value=1.6 Score=37.13 Aligned_cols=103 Identities=17% Similarity=0.183 Sum_probs=67.1
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHcCCcEEecCCC--------H--------
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERLGADSFLVSRD--------Q-------- 238 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~--~~~~~~~~~g~~~v~~~~~--------~-------- 238 (361)
..+.+++++.|+...+|..|++.+..++.+|.+.+++..... .....++.+|++.+..... .
T Consensus 90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~ 169 (355)
T d1jbqa_ 90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK 169 (355)
T ss_dssp HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence 345556777766667799999999999999997777776533 3345568899875432110 0
Q ss_pred ---------------------------HHHHHhcCCccEEEEcCCCcccHHH---HHHhhccCCEEEEecC
Q 018094 239 ---------------------------DEMQAAMGTMDGIIDTVSAVHPLMP---LIGLLKSQGKLVLVGA 279 (361)
Q Consensus 239 ---------------------------~~~~~~~~g~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g~ 279 (361)
+...++.+.+|.++-++|+..++.. .++...+.-+++.+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep 240 (355)
T d1jbqa_ 170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 240 (355)
T ss_dssp HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence 0111222358999999998764443 4445566778877653
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=90.47 E-value=0.14 Score=40.99 Aligned_cols=95 Identities=16% Similarity=0.144 Sum_probs=56.7
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHHc---CCc--EEecCCCHHHHHHhcCCccEEE
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKA---MGVKVTVISTSPSKKSEAIERL---GAD--SFLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~---~g~~Vi~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~g~d~vi 252 (361)
++++.+||=+|+| .|..+..+++. .+++|+.++.+++-...+.+++ +.. ..+...+ ...--.+.+|+++
T Consensus 37 ~~~~~~vLDlGCG-tG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d--~~~~~~~~~d~i~ 113 (225)
T d1im8a_ 37 VTADSNVYDLGCS-RGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND--IRHVEIKNASMVI 113 (225)
T ss_dssp CCTTCEEEEESCT-TCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC--TTTCCCCSEEEEE
T ss_pred cCCCCEEEEeccc-hhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccch--hhccccccceeeE
Confidence 5789999999874 34455556654 5789999999987654443322 321 1111111 1001113567766
Q ss_pred EcCCCc--------ccHHHHHHhhccCCEEEEec
Q 018094 253 DTVSAV--------HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 253 d~~g~~--------~~~~~~~~~l~~~G~~v~~g 278 (361)
-+..-. ..++.+.+.|+|+|.++...
T Consensus 114 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~ 147 (225)
T d1im8a_ 114 LNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE 147 (225)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence 543321 24677888999999999763
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=90.33 E-value=2.1 Score=35.15 Aligned_cols=103 Identities=18% Similarity=0.258 Sum_probs=64.6
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC--chhHHHHHHHcCCcEEecCCCH----------------
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSFLVSRDQ---------------- 238 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~--~~~~~~~~~~~g~~~v~~~~~~---------------- 238 (361)
..+.++++++|+...+|..|++++..++.+|.+++++... ++...+.++.+|++.++...+.
T Consensus 53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~ 132 (292)
T d2bhsa1 53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG 132 (292)
T ss_dssp HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence 3444566776666677999999999999999966666653 3334456688898754322210
Q ss_pred -----------H-----------H-HHHhcCCccEEEEcCCCcccHHH---HHHhhccCCEEEEecC
Q 018094 239 -----------D-----------E-MQAAMGTMDGIIDTVSAVHPLMP---LIGLLKSQGKLVLVGA 279 (361)
Q Consensus 239 -----------~-----------~-~~~~~~g~d~vid~~g~~~~~~~---~~~~l~~~G~~v~~g~ 279 (361)
+ . ..++.+.+|+++-++|+..++.- .++...+..+++.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep 199 (292)
T d2bhsa1 133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP 199 (292)
T ss_dssp SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence 0 0 11111258999999888764443 4444567777776643
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=90.31 E-value=0.12 Score=41.67 Aligned_cols=32 Identities=28% Similarity=0.366 Sum_probs=27.9
Q ss_pred EEEEEccchHHHHHHHHHHHCCC-eEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~ 217 (361)
+|+|+|+|..|+.++..++..|. +|+++...+
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 48999999999999999999997 698887653
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.19 E-value=0.26 Score=41.06 Aligned_cols=93 Identities=16% Similarity=0.178 Sum_probs=55.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCc-----EEecCCCHHHHH-Hh--cCCccE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD-----SFLVSRDQDEMQ-AA--MGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~-----~v~~~~~~~~~~-~~--~~g~d~ 250 (361)
+.+.+||=+|+| .|..++.+++. |++|+.++.+++....+.++ .+.. ..+..-+..... .. .+.+|.
T Consensus 55 ~~~~~vLD~GcG-~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~ 132 (292)
T d1xvaa_ 55 HGCHRVLDVACG-TGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 132 (292)
T ss_dssp TTCCEEEESSCT-TSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCC-CcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCceE
Confidence 567789888874 35567777765 89999999987654333121 1211 111111111111 11 247999
Q ss_pred EEEcCCCc--------------ccHHHHHHhhccCCEEEE
Q 018094 251 IIDTVSAV--------------HPLMPLIGLLKSQGKLVL 276 (361)
Q Consensus 251 vid~~g~~--------------~~~~~~~~~l~~~G~~v~ 276 (361)
|+.....- ..++.+.+.|+|+|.++.
T Consensus 133 v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 172 (292)
T d1xvaa_ 133 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 172 (292)
T ss_dssp EEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence 98653221 147788999999999876
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=90.09 E-value=2 Score=31.20 Aligned_cols=69 Identities=19% Similarity=0.264 Sum_probs=41.8
Q ss_pred EEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHc------CCcEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL------GADSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~------g~~~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
+|.|+|+|.+|...+..+...+. ++..++.++++....+..+ -....+...+. +...+.|+|+-++|.
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~----~~~~~adivvitag~ 77 (140)
T d1a5za1 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY----ADLKGSDVVIVAAGV 77 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG----GGGTTCSEEEECCCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH----HHhcCCCEEEEeccc
Confidence 47788999999988877766553 8888887765432221221 11111111111 224579999999887
Q ss_pred c
Q 018094 258 V 258 (361)
Q Consensus 258 ~ 258 (361)
.
T Consensus 78 ~ 78 (140)
T d1a5za1 78 P 78 (140)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=89.96 E-value=0.11 Score=42.95 Aligned_cols=95 Identities=19% Similarity=0.118 Sum_probs=55.7
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHHcCCc---EEecCCCHHHHHHhcCCccEEEE-
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA---IERLGAD---SFLVSRDQDEMQAAMGTMDGIID- 253 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~---~~~~g~~---~v~~~~~~~~~~~~~~g~d~vid- 253 (361)
+++|++||-.|+| +|..++.+|+..+++|+.++.+++....+ ++..|.+ .++..+..+.. ..+.+|.|+-
T Consensus 105 ~~~g~~VlD~~aG-~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~--~~~~~D~Ii~~ 181 (260)
T d2frna1 105 AKPDELVVDMFAG-IGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP--GENIADRILMG 181 (260)
T ss_dssp CCTTCEEEETTCT-TTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC--CCSCEEEEEEC
T ss_pred cCCccEEEECcce-EcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhc--cCCCCCEEEEC
Confidence 5899999987753 23444455666456999999998764333 2334542 22222211110 0135886653
Q ss_pred c-CCCcccHHHHHHhhccCCEEEEec
Q 018094 254 T-VSAVHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 254 ~-~g~~~~~~~~~~~l~~~G~~v~~g 278 (361)
- ..+...+..+++.+++||.+....
T Consensus 182 ~p~~~~~~l~~a~~~l~~gG~lh~~~ 207 (260)
T d2frna1 182 YVVRTHEFIPKALSIAKDGAIIHYHN 207 (260)
T ss_dssp CCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCchHHHHHHHHhhcCCCCEEEEEe
Confidence 2 233445778999999999876543
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=89.93 E-value=0.49 Score=39.77 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=56.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCc----------EEecCCCHHHHHHhcCCccEE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGAD----------SFLVSRDQDEMQAAMGTMDGI 251 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~----------~v~~~~~~~~~~~~~~g~d~v 251 (361)
...++|||+|+|.- ..+-.+++....+-+.++.-+....++++++-.. .++..+....+++....+|+|
T Consensus 105 ~~pk~VLIiGgG~G-~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDvI 183 (312)
T d2b2ca1 105 PDPKRVLIIGGGDG-GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 183 (312)
T ss_dssp SSCCEEEEESCTTS-HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCCCeEEEeCCCch-HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCEE
Confidence 45678999987533 3344666766664444444555556676764210 122112234555545589998
Q ss_pred EEcCCC----------cccHHHHHHhhccCCEEEEecC
Q 018094 252 IDTVSA----------VHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 252 id~~g~----------~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
|--... ...++.+.++|+++|.++.=+.
T Consensus 184 I~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~~ 221 (312)
T d2b2ca1 184 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE 221 (312)
T ss_dssp EECCC-------------HHHHHHHHEEEEEEEEEECC
T ss_pred EEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEecC
Confidence 842221 1235667889999999987643
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=89.74 E-value=0.35 Score=35.95 Aligned_cols=85 Identities=16% Similarity=0.207 Sum_probs=52.2
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH-HHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA-IERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
+|-|+|.|.+|...+.-++..|.+|++..+.+.+.... .+..+.. +. . .+.....|+||-|+........+
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---~~-~----~e~~~~~diIi~~v~~~~~~~~~ 73 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT---ET-S----EEDVYSCPVVISAVTPGVALGAA 73 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE---EC-C----HHHHHTSSEEEECSCGGGHHHHH
T ss_pred EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc---cc-H----HHHHhhcCeEEEEecCchHHHHH
Confidence 47788999999999999999999998887766544322 2233321 11 1 12334578888888776544443
Q ss_pred HHhhc-cCCEEEEec
Q 018094 265 IGLLK-SQGKLVLVG 278 (361)
Q Consensus 265 ~~~l~-~~G~~v~~g 278 (361)
..... .+..++.+.
T Consensus 74 ~~~~~~~~~~~id~s 88 (152)
T d1i36a2 74 RRAGRHVRGIYVDIN 88 (152)
T ss_dssp HHHHTTCCSEEEECS
T ss_pred HhhcccCCceeeccC
Confidence 33322 234555554
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=89.73 E-value=0.093 Score=40.79 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=29.8
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
++..|+|+|+|+.|+.++..|..+|.+|+++.+.
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~ 37 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence 3457999999999999999999999999998754
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=89.64 E-value=0.14 Score=40.53 Aligned_cols=31 Identities=35% Similarity=0.362 Sum_probs=28.2
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|+|+|+|+.|+.++..+..+|.+|+++...+
T Consensus 6 vvVIGgGpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 7889999999999999999999999998653
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=89.64 E-value=0.13 Score=42.42 Aligned_cols=32 Identities=25% Similarity=0.382 Sum_probs=28.9
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
+|+|+|+|..|+.++..+...|.+|+++..++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 48999999999999999999999999988753
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.56 E-value=0.39 Score=37.63 Aligned_cols=38 Identities=26% Similarity=0.359 Sum_probs=32.7
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 223 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~ 223 (361)
+|.|+|.|-+|+..+..+...|.+|++++.+.++...+
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI 39 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence 47889999999999999989999999999887766554
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=89.42 E-value=0.19 Score=42.32 Aligned_cols=32 Identities=38% Similarity=0.367 Sum_probs=28.9
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
.|+|+|||..|++++..++..|.+++++...+
T Consensus 9 dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~ 40 (298)
T d1w4xa1 9 DVLVVGAGFSGLYALYRLRELGRSVHVIETAG 40 (298)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECccHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 47889999999999999999999999988754
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=89.39 E-value=0.17 Score=38.72 Aligned_cols=32 Identities=22% Similarity=0.103 Sum_probs=27.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEe
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS 214 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~ 214 (361)
.+++|+|+|+|.+|+-++..++.+|.++.++.
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~ 33 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRL 33 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCceEEEE
Confidence 56889999999999999999999998654443
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=89.39 E-value=0.22 Score=40.33 Aligned_cols=92 Identities=15% Similarity=0.088 Sum_probs=55.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---HcCCcEEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIE---RLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~---~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
.++++||=+|+| .|..+..+++ .|.+|+.++.+++....+.+ ..+...-+...+.... ...+.+|+|+...+.-
T Consensus 36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~i~~~~~~~ 112 (246)
T d1y8ca_ 36 LVFDDYLDLACG-TGNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL-NINRKFDLITCCLDST 112 (246)
T ss_dssp CCTTEEEEETCT-TSTTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC-CCSCCEEEEEECTTGG
T ss_pred CCCCeEEEEeCc-CCHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhh-cccccccccceeeeee
Confidence 456789999985 4566666665 47899999988775433322 2343221222222211 1234799999643321
Q ss_pred ----------ccHHHHHHhhccCCEEEE
Q 018094 259 ----------HPLMPLIGLLKSQGKLVL 276 (361)
Q Consensus 259 ----------~~~~~~~~~l~~~G~~v~ 276 (361)
..++.+.+.|+|+|.++.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 140 (246)
T d1y8ca_ 113 NYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred eccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 135668888999999884
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=89.37 E-value=1.1 Score=31.89 Aligned_cols=91 Identities=13% Similarity=0.148 Sum_probs=59.0
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEe-cCCCHHHHHHhc-CCccEEEEcCCCccc--
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFL-VSRDQDEMQAAM-GTMDGIIDTVSAVHP-- 260 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~-~g~d~vid~~g~~~~-- 260 (361)
++++|.|.|.+|+..+..++ +..++++..++++.+.+ +..|...+. |..+++.+++.. +.++.++-+......
T Consensus 1 kHivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~-~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~ 77 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKV-LRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETI 77 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHH-HHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHH-HhcCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhH
Confidence 36889999999998888774 45677788877766555 666765543 334455555543 478999888776541
Q ss_pred -HHHHHHhhccCCEEEEec
Q 018094 261 -LMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 261 -~~~~~~~l~~~G~~v~~g 278 (361)
+-...+.+.|..+++...
T Consensus 78 ~~~~~~r~~~~~~~iia~~ 96 (129)
T d2fy8a1 78 HCILGIRKIDESVRIIAEA 96 (129)
T ss_dssp HHHHHHHHHCSSSCEEEEC
T ss_pred HHHHHHHHHCCCceEEEEE
Confidence 122344556776666553
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=89.30 E-value=0.21 Score=41.69 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=31.7
Q ss_pred CCCEEEEEcc-c--hHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 183 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 183 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
+|+++||.|+ | ++|.+.++.+...|++|++..++..
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~ 45 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA 45 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence 6889999997 5 7999999999999999998887654
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=89.13 E-value=0.49 Score=39.15 Aligned_cols=99 Identities=22% Similarity=0.190 Sum_probs=63.2
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHHHH---HHcCCcEEecCCCHHHHHHhcCCccEEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAI---ERLGADSFLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~~~---~~~g~~~v~~~~~~~~~~~~~~g~d~vi 252 (361)
..++.++.+||=+|+| .|..+..+++.. +.+|+.++.+++....+. +..+.+..+...+...+ ...+.+|+|+
T Consensus 22 ~~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-~~~~~fD~v~ 99 (281)
T d2gh1a1 22 VWKITKPVHIVDYGCG-YGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI 99 (281)
T ss_dssp TSCCCSCCEEEEETCT-TTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEE
T ss_pred HhccCCcCEEEEecCc-CCHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-cccCCceEEE
Confidence 3346778889889986 478888888875 568999998876544332 22343322222222211 1234799998
Q ss_pred EcCCCc------ccHHHHHHhhccCCEEEEec
Q 018094 253 DTVSAV------HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 253 d~~g~~------~~~~~~~~~l~~~G~~v~~g 278 (361)
....-. ..+..+.+.|+|+|.++.+-
T Consensus 100 ~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~ 131 (281)
T d2gh1a1 100 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 131 (281)
T ss_dssp EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence 764332 23677889999999998764
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=89.07 E-value=0.53 Score=38.28 Aligned_cols=95 Identities=13% Similarity=0.079 Sum_probs=60.0
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEec--CCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLV--SRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~--~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
..+.+||=+|+| +|..+..+++....+|+.++.+.+-.+.+.+++.....+. ..+.+......+.+|+|+-.---.+
T Consensus 92 ~~~~~vLD~GcG-~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~h 170 (254)
T d1xtpa_ 92 HGTSRALDCGAG-IGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp CCCSEEEEETCT-TTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCCeEEEeccc-CChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeeccccc
Confidence 567788888885 4777788887666799999988876655544444322111 1222211111236999987644332
Q ss_pred --------cHHHHHHhhccCCEEEEe
Q 018094 260 --------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 260 --------~~~~~~~~l~~~G~~v~~ 277 (361)
.+..+.+.|+++|.++..
T Consensus 171 l~d~d~~~~l~~~~~~LkpgG~iii~ 196 (254)
T d1xtpa_ 171 LTDADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhHHHHHHHHHhcCCCcEEEEE
Confidence 256688889999999875
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=88.97 E-value=0.63 Score=35.39 Aligned_cols=95 Identities=21% Similarity=0.238 Sum_probs=57.9
Q ss_pred EEEEEccchHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHH--Hc----C---CcE--------Eec--------CCC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAIE--RL----G---ADS--------FLV--------SRD 237 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g---~~Vi~~~~~~~~~~~~~~--~~----g---~~~--------v~~--------~~~ 237 (361)
+|.|.|-|-+|+++...+.... .+++.+....+ .+.++- ++ | .+. +++ .++
T Consensus 2 kIgINGfGRIGR~v~R~~~~~~~~~i~ivaINd~~~-~~~~ayLlkyDSvhG~~~~~i~~~~~~~~~ing~~I~~~~~~~ 80 (172)
T d1rm4a1 2 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGG-VKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRN 80 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECTTC-HHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEEcCCCC-HHHHHHHHhcCcccccccceeEecCCcceEECCEEEEEecCCC
Confidence 4788999999999998766532 46777666543 222211 11 1 110 111 112
Q ss_pred HHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCC
Q 018094 238 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPE 281 (361)
Q Consensus 238 ~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 281 (361)
++.+.+...|+|+|+||+|.-.....+...+..+-+-|.+..+.
T Consensus 81 p~~i~W~~~gvDiViEcTG~f~~~~~~~~hl~~GakkViiSAP~ 124 (172)
T d1rm4a1 81 PVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG 124 (172)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSCEEESSCC
T ss_pred hHHCChhhcCCCEEEecCceEccHHHHHHHHhcCCceEEeeccc
Confidence 22222322379999999999777788888888887666665544
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=88.93 E-value=0.85 Score=35.26 Aligned_cols=132 Identities=13% Similarity=0.182 Sum_probs=71.3
Q ss_pred EEEEEccchHHHHHHHHHHHCC-----CeEEEEeCCc---hhHHHHHHH------cCCc---------------EEec--
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMG-----VKVTVISTSP---SKKSEAIER------LGAD---------------SFLV-- 234 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g-----~~Vi~~~~~~---~~~~~~~~~------~g~~---------------~v~~-- 234 (361)
+|.|.|-|-+|+.+...+-..+ .+++.+.... +....+.+. |..+ .+++
T Consensus 4 kigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ayLlkyDSvhG~~~~~v~~~~~~~~~~~~~~~i~~g~ 83 (190)
T d1k3ta1 4 KVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVNGH 83 (190)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHHHHHHHEETTTEECSSCEEEECSSTTCSSCCEEEETTE
T ss_pred EEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHHHHHhhccccccCCCceEEEccCccccccccceEEcCc
Confidence 4788999999999887664432 3555544332 223333321 1111 0111
Q ss_pred -------CCCHHHHHHhcCCccEEEEcCCCcccHHHHHHhhccCCEEEEecCCCCC--ccc----ChHHHhhCCcEEEec
Q 018094 235 -------SRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLVGAPEKP--LEL----PAFSLLMGRKIVGGS 301 (361)
Q Consensus 235 -------~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~----~~~~~~~~~~~i~g~ 301 (361)
.++++.+.+..-++|+|+||+|.-.....+...+..|-+-|.+..+... .++ +...+-...-++...
T Consensus 84 ~i~~~~~~~~p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~~~~~tiV~GVN~~~y~~~~~~IIS~ 163 (190)
T d1k3ta1 84 RILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASGGAKTLVMGVNHHEYNPSEHHVVSN 163 (190)
T ss_dssp EEEEEECCSCGGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBSSCEECCTTTTGGGCCTTTCSEEEC
T ss_pred eEEecccCCChhHCCHhhcCCcEEEEecccccccccchhhcccCcceeeeccCCcccCCeEEeccCHhhcCCccCcEEEc
Confidence 1223333333338999999999877778888889888777777554321 111 111211122234444
Q ss_pred ccCCHHHHHHHHHHHH
Q 018094 302 MIGGMKETQEMIDFAA 317 (361)
Q Consensus 302 ~~~~~~~~~~~~~~l~ 317 (361)
..-+...+..+++.|.
T Consensus 164 ASCTtn~lapv~kvi~ 179 (190)
T d1k3ta1 164 ADNEWGYSHRVVDLVR 179 (190)
T ss_dssp CCTTHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHHHHH
Confidence 4445556666665544
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=88.82 E-value=0.19 Score=38.37 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=56.7
Q ss_pred EEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 264 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~ 264 (361)
+|.|+|.|.+|...+..++.. +.+++.+.+..++.. +. ..+..+.+ ...+.+.+|+|+.|++...-...+
T Consensus 5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~---~~---~~~~~~~~---~~~~~~~~D~Vvi~tp~~~h~~~a 75 (170)
T d1f06a1 5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD---TK---TPVFDVAD---VDKHADDVDVLFLCMGSATDIPEQ 75 (170)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS---SS---SCEEEGGG---GGGTTTTCSEEEECSCTTTHHHHH
T ss_pred eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc---cc---cccccchh---hhhhccccceEEEeCCCcccHHHH
Confidence 478999999999888888775 568777776554321 11 11222222 122345799999999887657888
Q ss_pred HHhhccCCEEEEe
Q 018094 265 IGLLKSQGKLVLV 277 (361)
Q Consensus 265 ~~~l~~~G~~v~~ 277 (361)
.++|+.|-.++..
T Consensus 76 ~~aL~aG~~vv~~ 88 (170)
T d1f06a1 76 APKFAQFACTVDT 88 (170)
T ss_dssp HHHHTTTSEEECC
T ss_pred HHHHHCCCcEEEe
Confidence 8999998887754
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.82 E-value=0.28 Score=38.54 Aligned_cols=67 Identities=13% Similarity=0.026 Sum_probs=42.3
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcCCcEEecCCCHHH-HHHhcCCccEEEEcCCCc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLGADSFLVSRDQDE-MQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~~~~g~d~vid~~g~~ 258 (361)
++|||+|+ |-+|...+..+...|. +|++..+.+... . .....+..+... ...+....|.||.++|..
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------~-~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~ 73 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------H-PRLDNPVGPLAELLPQLDGSIDTAFCCLGTT 73 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------C-TTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------c-ccccccccchhhhhhccccchheeeeeeeee
Confidence 68999998 9999999998888886 666665543211 0 111111222222 223344789999998875
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=88.73 E-value=0.2 Score=39.49 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=27.8
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
|+|+|+|+.|+.++..|..+|.+|.++...
T Consensus 5 vvVIG~G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGGGSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 788999999999999999999999999764
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=88.65 E-value=0.77 Score=33.66 Aligned_cols=70 Identities=19% Similarity=0.171 Sum_probs=41.4
Q ss_pred EEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHcC-C-----cEEecCCCHHHHHHhcCCccEEEEcCCC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERLG-A-----DSFLVSRDQDEMQAAMGTMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~g-~-----~~v~~~~~~~~~~~~~~g~d~vid~~g~ 257 (361)
+|.|+|+|.+|...+..+...+. ++++++...++....+.++- + ...+...+ .+...+.|+|+-++|.
T Consensus 3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~----~~~~~~adivvitag~ 78 (142)
T d1y6ja1 3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD----YSDVKDCDVIVVTAGA 78 (142)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C----GGGGTTCSEEEECCCC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc----HHHhCCCceEEEeccc
Confidence 57888999999999988888775 78888877765322222322 1 11111111 1223579999999887
Q ss_pred cc
Q 018094 258 VH 259 (361)
Q Consensus 258 ~~ 259 (361)
..
T Consensus 79 ~~ 80 (142)
T d1y6ja1 79 NR 80 (142)
T ss_dssp --
T ss_pred cc
Confidence 53
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=88.39 E-value=0.29 Score=40.73 Aligned_cols=34 Identities=21% Similarity=0.451 Sum_probs=31.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
.|.+|+|.|-|.+|..+++.+...|++|+.+...
T Consensus 35 ~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 35 GDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEcc
Confidence 6789999999999999999999999999988753
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=88.22 E-value=0.24 Score=40.60 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=28.8
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
.|+|+|+|.+|+.++.-+...|.+|+++.+.+
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 38999999999999999988999999998764
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.17 E-value=1.7 Score=36.66 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=59.4
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHH----------HHHcCCc--EE-ecCCCHH--H
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA----------IERLGAD--SF-LVSRDQD--E 240 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~----------~~~~g~~--~v-~~~~~~~--~ 240 (361)
....++++++||=+|+| .|..+.++|+..++ +++.++-+++....+ ++.+|.. .+ +...+.. .
T Consensus 145 ~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~ 223 (328)
T d1nw3a_ 145 DEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 223 (328)
T ss_dssp HHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHH
T ss_pred HHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccccc
Confidence 44568999988888875 57777888998887 799998887543221 1222321 11 2122211 1
Q ss_pred HHHhcCCccEEEEcCC-C-c---ccHHHHHHhhccCCEEEEec
Q 018094 241 MQAAMGTMDGIIDTVS-A-V---HPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 241 ~~~~~~g~d~vid~~g-~-~---~~~~~~~~~l~~~G~~v~~g 278 (361)
.......+|+|+-..- . + ..+....+.|+|||++|..-
T Consensus 224 ~~~~~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~ 266 (328)
T d1nw3a_ 224 WRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 266 (328)
T ss_dssp HHHHHHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cccccCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence 1121124688874221 1 1 13455777899999999764
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=88.14 E-value=0.26 Score=39.18 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=28.1
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|+|+|+|+.|+.++..|..+|.+|.++...+
T Consensus 8 viVIG~GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 8 VVIIGGGPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 7889999999999999999999999998654
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.10 E-value=0.3 Score=40.93 Aligned_cols=72 Identities=18% Similarity=0.136 Sum_probs=47.0
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHHcCCc-----EEecCCCHHHHHHhcC--CccEEEEc
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAIERLGAD-----SFLVSRDQDEMQAAMG--TMDGIIDT 254 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~--~~~~~~~~g~~-----~v~~~~~~~~~~~~~~--g~d~vid~ 254 (361)
++|||+|+ |-+|...+..+...|.+|+++++.... ...+ +.++.+ .-.|-.+.+.+.+... ..++++.+
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~ 79 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL-RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 79 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH-HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH-HHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence 47999998 999999999998889999999876532 2222 444432 1124444444444332 56777777
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
+..
T Consensus 80 a~~ 82 (321)
T d1rpna_ 80 AAQ 82 (321)
T ss_dssp CSC
T ss_pred ccc
Confidence 654
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=88.10 E-value=0.27 Score=38.78 Aligned_cols=30 Identities=40% Similarity=0.436 Sum_probs=27.6
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
|+|+|+|+.|+.++..|...|.+|.++...
T Consensus 6 viVIG~GpaGl~aA~~aar~G~kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (223)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence 788899999999999999999999999765
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.95 E-value=0.24 Score=41.83 Aligned_cols=31 Identities=35% Similarity=0.416 Sum_probs=28.1
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|+|+|+|..|+.++..++..|.+|+++...+
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 7899999999999999999999999998643
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=87.86 E-value=0.21 Score=39.58 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=27.9
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
++|+|+|+.|+.++..|..+|.+|.++...
T Consensus 8 lvVIG~GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 8 LLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence 788999999999999999999999999764
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.85 E-value=0.36 Score=38.33 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=59.0
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC---CcEE-ecCCCHHHHHHhcCCccEEEEcCC
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG---ADSF-LVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g---~~~v-~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
..++.+||=+|+| .|..+..+++..+.+|+.++-+++....+.+.+. ...+ +...+...+....+.+|+|+....
T Consensus 58 ~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~~~~fD~I~~~~~ 136 (222)
T d2ex4a1 58 KTGTSCALDCGAG-IGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV 136 (222)
T ss_dssp CCCCSEEEEETCT-TTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC
T ss_pred CCCCCEEEEeccC-CCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence 4667888888875 4666667776667799999988776554433322 2111 111222221112246899987543
Q ss_pred Ccc--------cHHHHHHhhccCCEEEEec
Q 018094 257 AVH--------PLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 257 ~~~--------~~~~~~~~l~~~G~~v~~g 278 (361)
-.+ .+..+.+.|+++|.++...
T Consensus 137 l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~ 166 (222)
T d2ex4a1 137 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 166 (222)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence 322 3566788899999998763
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=87.83 E-value=0.4 Score=38.86 Aligned_cols=96 Identities=17% Similarity=0.114 Sum_probs=57.7
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCc-EE-ecCCCHHHH-HHhcCCccEEEEc
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIER---LGAD-SF-LVSRDQDEM-QAAMGTMDGIIDT 254 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~---~g~~-~v-~~~~~~~~~-~~~~~g~d~vid~ 254 (361)
++++++||=+|+|. |..+..+++....+|+.++.+++....+.++ .+.. .+ +-..+.... ....+.+|+|+..
T Consensus 22 ~~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~ 100 (252)
T d1ri5a_ 22 TKRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ 100 (252)
T ss_dssp CCTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEc
Confidence 47899999999864 4456677776556899999998876555333 2321 11 111111000 0012369999875
Q ss_pred CCCcc----------cHHHHHHhhccCCEEEEe
Q 018094 255 VSAVH----------PLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 255 ~g~~~----------~~~~~~~~l~~~G~~v~~ 277 (361)
..-.+ .+..+.+.|+|+|.++..
T Consensus 101 ~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~ 133 (252)
T d1ri5a_ 101 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 133 (252)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence 44332 234566789999998764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.79 E-value=0.2 Score=41.97 Aligned_cols=32 Identities=31% Similarity=0.332 Sum_probs=28.7
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
.|+|+|||..|+.++..+...|.+|.++..++
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 48999999999999999988899999988764
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=87.73 E-value=0.58 Score=39.42 Aligned_cols=94 Identities=17% Similarity=0.161 Sum_probs=55.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHc------CC-----cEEecCCCHHHHHHhcCCcc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL------GA-----DSFLVSRDQDEMQAAMGTMD 249 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~------g~-----~~v~~~~~~~~~~~~~~g~d 249 (361)
...++|||+|+|. |..+..+++.... +|.++.-.++ .-++++++ +. -.++..+..+.+++....+|
T Consensus 76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~-Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yD 153 (312)
T d1uira_ 76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGE-LVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (312)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHH-HHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHH-HHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCccc
Confidence 4567899998753 4555566676654 7777776554 34444543 11 12222222345555455899
Q ss_pred EEEEcC----CCc---------ccHHHHHHhhccCCEEEEe
Q 018094 250 GIIDTV----SAV---------HPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 250 ~vid~~----g~~---------~~~~~~~~~l~~~G~~v~~ 277 (361)
+||--. +.. ..++.+.+.|+++|.++.=
T Consensus 154 vIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~ 194 (312)
T d1uira_ 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (312)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence 987422 211 1346788999999988753
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=87.58 E-value=0.26 Score=41.15 Aligned_cols=31 Identities=45% Similarity=0.580 Sum_probs=28.3
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|||+|+|..|+.++..|...|++|+++...+
T Consensus 19 VlVIG~G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 19 VVVVGSGGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 8999999999999999999999999998654
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.42 E-value=0.28 Score=38.01 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=28.1
Q ss_pred CEEEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
..|+|+|+|+.|+.++..|...|.+++++...
T Consensus 6 ~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~ 37 (192)
T d1vdca1 6 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGW 37 (192)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCcEEEEEee
Confidence 46999999999999999999999999888743
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=87.31 E-value=3 Score=30.12 Aligned_cols=69 Identities=16% Similarity=0.098 Sum_probs=43.7
Q ss_pred EEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHH-------cCCc-EEecCCCHHHHHHhcCCccEEEEcC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIER-------LGAD-SFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~-------~g~~-~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+|.|+|+|.+|...+..+...+. ++.+++.++++....... ++.. .+....+. +...+.|+++-++
T Consensus 2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~----~~~~dadvvvita 77 (142)
T d1guza1 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY----ADTANSDIVIITA 77 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCG----GGGTTCSEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCH----HHhcCCeEEEEEE
Confidence 47888999999998888888774 888888777653322111 1111 12212221 2235789999998
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
|.+
T Consensus 78 g~~ 80 (142)
T d1guza1 78 GLP 80 (142)
T ss_dssp SCC
T ss_pred ecC
Confidence 864
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=87.23 E-value=0.32 Score=38.75 Aligned_cols=31 Identities=32% Similarity=0.296 Sum_probs=28.2
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|+|+|+|+.|+.++..|...|.+|.++...+
T Consensus 9 viIIG~GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGGGPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 7889999999999999999999999997654
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=87.05 E-value=0.56 Score=34.92 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=29.1
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCc
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP 217 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~ 217 (361)
-+++|+|+|+|.+|.=++..+..+|+ .|+++.+.+
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 46789999999999999999999998 576776654
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=86.97 E-value=2.4 Score=31.92 Aligned_cols=86 Identities=26% Similarity=0.266 Sum_probs=61.2
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccHH
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLM 262 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 262 (361)
++++|.|+|-|.-|.+.++=+|--|.+|++--+...+..+.+++-|.+.. .+.+.....|+|.-.+..+. ..
T Consensus 15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~-------~~~eA~~~aDiim~L~PD~~-q~ 86 (182)
T d1np3a2 15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-------DVKTAVAAADVVMILTPDEF-QG 86 (182)
T ss_dssp HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-------CHHHHHHTCSEEEECSCHHH-HH
T ss_pred CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccc-------cHHHHhhhcCeeeeecchHH-HH
Confidence 46789999999999999999999999999998887665566677776532 23344556899998777543 33
Q ss_pred HHHH-----hhccCCEEEE
Q 018094 263 PLIG-----LLKSQGKLVL 276 (361)
Q Consensus 263 ~~~~-----~l~~~G~~v~ 276 (361)
..++ .|+++-.+..
T Consensus 87 ~vy~~~I~p~lk~g~~L~F 105 (182)
T d1np3a2 87 RLYKEEIEPNLKKGATLAF 105 (182)
T ss_dssp HHHHHHTGGGCCTTCEEEE
T ss_pred HHHHHhhhhhcCCCcEEEE
Confidence 4443 3455555443
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=86.93 E-value=0.25 Score=41.95 Aligned_cols=32 Identities=28% Similarity=0.407 Sum_probs=26.7
Q ss_pred EEEEEccchHHHHHHHHHH-----HCCCeEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAK-----AMGVKVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~-----~~g~~Vi~~~~~~ 217 (361)
.|+|+|+|++|++++.++. ..|.+|+++.+.+
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~ 45 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRS 45 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence 3899999999999888873 5799999998764
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=86.91 E-value=0.75 Score=33.90 Aligned_cols=71 Identities=17% Similarity=0.138 Sum_probs=44.1
Q ss_pred CCEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHHc------CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 184 GMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAIERL------GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 184 g~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~~~~~~~~~~------g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
..+|.|+|+|.+|...+..+...| .++++++..+++....+..+ .....+...+.+ ...+.|+|+-++
T Consensus 5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~----~~~~adivvita 80 (146)
T d1ez4a1 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS----DCKDADLVVITA 80 (146)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG----GGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH----HhccccEEEEec
Confidence 457999999999998888887766 38999888776543222221 111111122211 234789999888
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
|.+
T Consensus 81 g~~ 83 (146)
T d1ez4a1 81 GAP 83 (146)
T ss_dssp CC-
T ss_pred ccc
Confidence 764
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=86.91 E-value=0.99 Score=33.20 Aligned_cols=88 Identities=18% Similarity=0.227 Sum_probs=49.0
Q ss_pred EEEEEcc-chHHHHHHHHH-HHCC---CeEEEEeCCchhHHHHHHHcCCc--EEecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 186 HVGVVGL-GGLGHVAVKFA-KAMG---VKVTVISTSPSKKSEAIERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la-~~~g---~~Vi~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
+|-|+|| |.+|+-.++++ .... .+++...++....... .++.. .+.+..+.+. ..++|++|-++++.
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~--~~~~~~~~~~~~~~~~~----~~~~DivF~a~~~~ 76 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAP--SFGGTTGTLQDAFDLEA----LKALDIIVTCQGGD 76 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCC--GGGTCCCBCEETTCHHH----HHTCSEEEECSCHH
T ss_pred EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccc--cccCCceeeecccchhh----hhcCcEEEEecCch
Confidence 6889998 99999999754 4322 3666666554321111 11111 1111112111 24699999999987
Q ss_pred ccHHHHHHhhccC--CEEEEecC
Q 018094 259 HPLMPLIGLLKSQ--GKLVLVGA 279 (361)
Q Consensus 259 ~~~~~~~~~l~~~--G~~v~~g~ 279 (361)
.+......+...+ ..+++.+.
T Consensus 77 ~s~~~~~~~~~~g~~~~VID~Ss 99 (146)
T d1t4ba1 77 YTNEIYPKLRESGWQGYWIDAAS 99 (146)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSS
T ss_pred HHHHhhHHHHhcCCCeecccCCc
Confidence 6445555555544 24666654
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=86.76 E-value=0.32 Score=39.91 Aligned_cols=31 Identities=32% Similarity=0.347 Sum_probs=28.1
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|+|+|+|.+|+.++.-+...|.+|+++.+.+
T Consensus 6 vvIIGaGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 8899999999999999988999999998753
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.72 E-value=0.69 Score=38.33 Aligned_cols=95 Identities=20% Similarity=0.172 Sum_probs=54.3
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcC---------Cc-EEecCCCHHHHHHhcCCccE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG---------AD-SFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~~~~~g~d~ 250 (361)
...++|||+|+|. |..+-.+++..+. +|+++. -+....++++++- .. .++..+.-..++...+.+|+
T Consensus 77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vE-iD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv 154 (285)
T d2o07a1 77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCE-IDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 154 (285)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEE-SCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeecc-CCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCE
Confidence 4568899998643 3345556676666 555554 4445556666542 11 12222223455444457999
Q ss_pred EEEcCCC----------cccHHHHHHhhccCCEEEEec
Q 018094 251 IIDTVSA----------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 278 (361)
||--... ...++.+.+.|+++|.++.=.
T Consensus 155 Ii~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~ 192 (285)
T d2o07a1 155 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 192 (285)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence 8743221 123566788999999988653
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=86.71 E-value=0.6 Score=34.60 Aligned_cols=46 Identities=20% Similarity=0.133 Sum_probs=37.4
Q ss_pred hhhHHHHhhCCCCCCCEEEEE--ccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 170 TVYSPLRFYGLDKPGMHVGVV--GLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 170 ~a~~~l~~~~~~~~g~~VlI~--Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|....+. .+..+++.++|+ |+|-+|+-+++.+..+|.+|+++.+.+
T Consensus 27 t~~d~l~--~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 27 TPEQVMD--GKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp CHHHHHH--TCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CHHHHhc--CccccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence 4455553 335788888887 779999999999999999999999865
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.65 E-value=3.6 Score=29.78 Aligned_cols=69 Identities=12% Similarity=0.128 Sum_probs=43.6
Q ss_pred EEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHH-------cCC-cEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIER-------LGA-DSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~-------~g~-~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
+|.|+|+|.+|...+..+...+. ++++++.++++....+.. ++. ..+....+. +...+.|+|+-++
T Consensus 2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~----~~~~~adiVvita 77 (142)
T d1ojua1 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY----SLLKGSEIIVVTA 77 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG----GGGTTCSEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH----HHhccccEEEEec
Confidence 47788999999988887776664 788888776653221111 222 223322221 2345799999998
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
|.+
T Consensus 78 g~~ 80 (142)
T d1ojua1 78 GLA 80 (142)
T ss_dssp CCC
T ss_pred ccc
Confidence 864
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.61 E-value=0.37 Score=37.96 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=27.6
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
|+|+|+|+.|+.++..|..+|.+|.++...
T Consensus 6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGARAAVVESH 35 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence 788899999999999999999999999754
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=86.36 E-value=1.6 Score=32.59 Aligned_cols=70 Identities=17% Similarity=0.242 Sum_probs=45.1
Q ss_pred CEEEEEccchHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHHc-------CCcEEecCCCHHHHHHhcCCccEEEEcC
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAIERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~--~Vi~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
.+|.|+|+|.+|...+..+...+. ++++++.+.++....+..+ +...++...+. +...+.|+|+-++
T Consensus 20 ~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~----~~~~~adivvita 95 (159)
T d2ldxa1 20 CKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY----NVSANSKLVIITA 95 (159)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG----GGGTTEEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch----hhhccccEEEEec
Confidence 479999999999999998888775 7888887766533222222 11222222221 1235789999988
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
|.+
T Consensus 96 g~~ 98 (159)
T d2ldxa1 96 GAR 98 (159)
T ss_dssp SCC
T ss_pred ccc
Confidence 874
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=85.64 E-value=1.2 Score=36.99 Aligned_cols=95 Identities=14% Similarity=0.174 Sum_probs=56.1
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcC---------Cc-EEecCCCHHHHHHhcC-Ccc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG---------AD-SFLVSRDQDEMQAAMG-TMD 249 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g---------~~-~v~~~~~~~~~~~~~~-g~d 249 (361)
...++|||+|.|. |..+-.+++..+. ++.++.-. ....++++++- .. .++..+..+.+....+ .+|
T Consensus 79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD-~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yD 156 (290)
T d1xj5a_ 79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEID-KMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 156 (290)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESC-HHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCC-HHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCcc
Confidence 4567899998643 3344567777676 55555544 45556666642 11 1222222345555444 799
Q ss_pred EEEEcCCC----------cccHHHHHHhhccCCEEEEec
Q 018094 250 GIIDTVSA----------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 250 ~vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 278 (361)
+||--... ...++.+.++|+++|.++.=.
T Consensus 157 vIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~ 195 (290)
T d1xj5a_ 157 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 195 (290)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence 87742222 123677888999999998653
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=85.50 E-value=0.51 Score=36.33 Aligned_cols=91 Identities=14% Similarity=0.149 Sum_probs=54.2
Q ss_pred EEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHHcC---CcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIERLG---ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
+|.|+|+ |-+|+-.++++..+- .++..+.+.......+.+.+. ........ ........+.|++|-+..+..
T Consensus 7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dvvf~alp~~~- 83 (183)
T d2cvoa1 7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLV--AVKDADFSNVDAVFCCLPHGT- 83 (183)
T ss_dssp EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCB--CGGGCCGGGCSEEEECCSSSH-
T ss_pred EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccch--hhhhhhhcccceeeeccccch-
Confidence 5788998 999999999998874 477766655443222211111 11000000 011112236999999999887
Q ss_pred HHHHHHhhccCCEEEEecC
Q 018094 261 LMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g~ 279 (361)
.......+...+.++....
T Consensus 84 s~~~~~~l~~~~~~v~~~~ 102 (183)
T d2cvoa1 84 TQEIIKGLPQELKIVDLSA 102 (183)
T ss_dssp HHHHHHTSCSSCEEEECSS
T ss_pred HHHHHHHHHhcCcccccch
Confidence 4445566777888776643
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=85.37 E-value=3 Score=32.93 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=61.7
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHC--CCeEEEEeCCchhHHH---HHHHcCCcE---EecCCCHHHHHHh------cCC
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSE---AIERLGADS---FLVSRDQDEMQAA------MGT 247 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~--g~~Vi~~~~~~~~~~~---~~~~~g~~~---v~~~~~~~~~~~~------~~g 247 (361)
...++||=+|. .+|..++.+|+.+ +.+++.+..+++.... ..++.|... ++.....+.+.++ .+.
T Consensus 58 ~~~k~iLEiGT-~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~~ 136 (227)
T d1susa1 58 INAKNTMEIGV-YTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 136 (227)
T ss_dssp HTCCEEEEECC-GGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTTC
T ss_pred cCCCcEEEecc-hhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCCc
Confidence 46678888886 3577778888876 4588888887764322 223456532 2222333444444 236
Q ss_pred ccEEEEcCCCcc---cHHHHHHhhccCCEEEEecC
Q 018094 248 MDGIIDTVSAVH---PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 248 ~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~ 279 (361)
||+||-=+.... .+..+++.|++||.++.=..
T Consensus 137 fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNv 171 (227)
T d1susa1 137 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNT 171 (227)
T ss_dssp BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETT
T ss_pred eeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccC
Confidence 999986554443 35678899999999876543
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=85.37 E-value=0.44 Score=40.35 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=27.2
Q ss_pred CEEEEEccchHHHHHHHHHHHCC--CeEEEEeCCch
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPS 218 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g--~~Vi~~~~~~~ 218 (361)
++|+|+|||..|++++..++..| .+|++..++++
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 57999999999998887666555 48988887753
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.33 E-value=0.23 Score=36.82 Aligned_cols=89 Identities=13% Similarity=0.129 Sum_probs=55.2
Q ss_pred EEEEEcc-chHHHHHHHHHHHC---CCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcccH
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM---GVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 261 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~---g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~~ 261 (361)
+|.|+|+ |-+|+-.++++..+ ..++..+.++......+ .+...... ..+.+. ....+.|++|-+.++..+.
T Consensus 4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i--~~~~~~~~-~~~~~~--~~~~~~d~vf~a~p~~~s~ 78 (144)
T d2hjsa1 4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--GFAESSLR-VGDVDS--FDFSSVGLAFFAAAAEVSR 78 (144)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--EETTEEEE-CEEGGG--CCGGGCSEEEECSCHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce--eeccccch-hccchh--hhhccceEEEecCCcchhh
Confidence 5889998 99999999999654 34777766654322111 11111111 000000 1123689999999987766
Q ss_pred HHHHHhhccCCEEEEecC
Q 018094 262 MPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 262 ~~~~~~l~~~G~~v~~g~ 279 (361)
...-.....+.++++.+.
T Consensus 79 ~~~~~~~~~g~~VID~Ss 96 (144)
T d2hjsa1 79 AHAERARAAGCSVIDLSG 96 (144)
T ss_dssp HHHHHHHHTTCEEEETTC
T ss_pred hhccccccCCceEEeech
Confidence 667777788888888754
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=85.28 E-value=0.38 Score=37.84 Aligned_cols=30 Identities=33% Similarity=0.401 Sum_probs=27.4
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
|+|+|+|+.|+.++..|...|.+|.++...
T Consensus 6 viIIGgGpAGl~aA~~aar~G~~V~viE~~ 35 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY 35 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence 788899999999999999999999999754
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=85.17 E-value=1.2 Score=36.47 Aligned_cols=95 Identities=22% Similarity=0.150 Sum_probs=57.2
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcC-----C-----cEEecCCCHHHHHHhcCCccE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG-----A-----DSFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g-----~-----~~v~~~~~~~~~~~~~~g~d~ 250 (361)
...++|||+|+|. |..+..+++..+. +|.++.-.+ ...++++++- + -.++..+....+++....+|+
T Consensus 74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~-~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDv 151 (274)
T d1iy9a_ 74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDG-KVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV 151 (274)
T ss_dssp SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCH-HHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCH-HHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCE
Confidence 4567899998643 3445566676665 666655554 4455656542 1 123333334556555558999
Q ss_pred EEEcCCC----------cccHHHHHHhhccCCEEEEec
Q 018094 251 IIDTVSA----------VHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~g~----------~~~~~~~~~~l~~~G~~v~~g 278 (361)
|+--... ...++.+.++|+++|.++.=.
T Consensus 152 Ii~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~ 189 (274)
T d1iy9a_ 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (274)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence 8743211 223677888999999998653
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=85.13 E-value=0.76 Score=36.37 Aligned_cols=98 Identities=18% Similarity=0.112 Sum_probs=54.6
Q ss_pred hhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCC
Q 018094 177 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 177 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
......++.+||=+|+|. |..+..++ ..|.+|+.++.+++....+.+++.-..-+...+.+.. ...+.+|+|+-.--
T Consensus 14 ~~~~~~~~~~VLDiGcG~-G~~~~~l~-~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~-~~~~~fD~I~~~~v 90 (225)
T d2p7ia1 14 AFTPFFRPGNLLELGSFK-GDFTSRLQ-EHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHV 90 (225)
T ss_dssp HHGGGCCSSCEEEESCTT-SHHHHHHT-TTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESC
T ss_pred HhhhhCCCCcEEEEeCCC-cHHHHHHH-HcCCeEEEEeCcHHHhhhhhccccccccccccccccc-ccccccccccccce
Confidence 333334566788888753 55555554 4578999999988766554334432211122222211 12347999985422
Q ss_pred Ccc------cHHHHH-HhhccCCEEEEe
Q 018094 257 AVH------PLMPLI-GLLKSQGKLVLV 277 (361)
Q Consensus 257 ~~~------~~~~~~-~~l~~~G~~v~~ 277 (361)
-++ .+.... ++|+++|.++..
T Consensus 91 leh~~d~~~~l~~i~~~~Lk~gG~l~i~ 118 (225)
T d2p7ia1 91 LEHIDDPVALLKRINDDWLAEGGRLFLV 118 (225)
T ss_dssp GGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence 211 133444 568999988865
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=85.13 E-value=1.2 Score=31.76 Aligned_cols=85 Identities=16% Similarity=0.230 Sum_probs=52.6
Q ss_pred CCCCEEEEEccch--HH---------HHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CcEEec-CCCHHHHHHhc--C
Q 018094 182 KPGMHVGVVGLGG--LG---------HVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-ADSFLV-SRDQDEMQAAM--G 246 (361)
Q Consensus 182 ~~g~~VlI~Gag~--vG---------~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~~v~~-~~~~~~~~~~~--~ 246 (361)
..-++|||+|+|+ +| .-++..+|..|.+++.+..+++... ..+. ++.++- .=..+.+.++. +
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVs---td~d~aD~lYfePlt~e~v~~Ii~~E 81 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIM---TDPEMADATYIEPIHWEVVRKIIEKE 81 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGG---GCGGGSSEEECSCCCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhh---cChhhcceeeeecCCHHHHHHHHHHh
Confidence 3457899999864 33 4445555567999999999987641 1222 344432 22345555543 3
Q ss_pred CccEEEEcCCCcccHHHHHHhhc
Q 018094 247 TMDGIIDTVSAVHPLMPLIGLLK 269 (361)
Q Consensus 247 g~d~vid~~g~~~~~~~~~~~l~ 269 (361)
..|.|+-..|+...++.+.++.+
T Consensus 82 ~pd~il~~~GGQtalnla~~L~~ 104 (127)
T d1a9xa3 82 RPDAVLPTMGGQTALNCALELER 104 (127)
T ss_dssp CCSEEECSSSHHHHHHHHHHHHH
T ss_pred CcCCeEEEeeeehHhHHHHHHHH
Confidence 78888888888766666666543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.12 E-value=1.5 Score=36.95 Aligned_cols=72 Identities=21% Similarity=0.161 Sum_probs=45.7
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC----------chhHHHHHHHcC---CcEE-ecCCCHHHHHHhc--CC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS----------PSKKSEAIERLG---ADSF-LVSRDQDEMQAAM--GT 247 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~----------~~~~~~~~~~~g---~~~v-~~~~~~~~~~~~~--~g 247 (361)
++|||+|+ |-+|...+..+...|.+|+++++. .+.... .+.+. ...+ .|-.+.+.+.+.. ..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 81 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRR-VQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHH-HHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHH-HHHhcCCCcEEEEeeccccccccccccccc
Confidence 58999998 999999999999999999998631 111111 12221 2221 2345555555543 36
Q ss_pred ccEEEEcCCC
Q 018094 248 MDGIIDTVSA 257 (361)
Q Consensus 248 ~d~vid~~g~ 257 (361)
.++++.+++.
T Consensus 82 ~~~i~h~Aa~ 91 (346)
T d1ek6a_ 82 FMAVIHFAGL 91 (346)
T ss_dssp EEEEEECCSC
T ss_pred cccccccccc
Confidence 7788887764
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=85.08 E-value=0.36 Score=39.69 Aligned_cols=60 Identities=10% Similarity=0.161 Sum_probs=38.6
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcC--CccEEEEcCCC
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMG--TMDGIIDTVSA 257 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~--g~d~vid~~g~ 257 (361)
+|||.|+ |-+|...+..+...|. ++++...... +- .|-.+.+.+.+... ++|+||.+++.
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------~~----~Dl~~~~~~~~~i~~~~~D~Vih~Aa~ 64 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------FC----GDFSNPKGVAETVRKLRPDVIVNAAAH 64 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------SC----CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------cc----CcCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 5899998 9999998887776664 5455443221 11 23334455544332 68999999874
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=84.79 E-value=0.35 Score=40.72 Aligned_cols=32 Identities=38% Similarity=0.506 Sum_probs=28.4
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
.|||+|+|..|+.++.-|...|++|+++...+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKAGANVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48899999999999999999999999998653
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=84.78 E-value=2.1 Score=35.90 Aligned_cols=107 Identities=19% Similarity=0.206 Sum_probs=67.1
Q ss_pred hHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHcCCcEEecCCCHH----------
Q 018094 172 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERLGADSFLVSRDQD---------- 239 (361)
Q Consensus 172 ~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~--~~~~~~~~~g~~~v~~~~~~~---------- 239 (361)
++.+.....-.+..+|+...+|..|.+.+..++.+|.+++++..... .+...++.+|++-++...+.+
T Consensus 63 ~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~ 142 (331)
T d1tdja1 63 YAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELS 142 (331)
T ss_dssp HHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhh
Confidence 44454443334455566666799999999999999997777765433 344556788887554333210
Q ss_pred -------------------------HHHHhcCCccEEEEcCCCcccHH---HHHHhhccCCEEEEec
Q 018094 240 -------------------------EMQAAMGTMDGIIDTVSAVHPLM---PLIGLLKSQGKLVLVG 278 (361)
Q Consensus 240 -------------------------~~~~~~~g~d~vid~~g~~~~~~---~~~~~l~~~G~~v~~g 278 (361)
.+.+-.+.+|+||-++|+..++. ..++.+.+.-+++.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve 209 (331)
T d1tdja1 143 QQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE 209 (331)
T ss_dssp HHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred hcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence 01111235899999999875443 3455556777888774
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=84.69 E-value=0.7 Score=32.41 Aligned_cols=36 Identities=17% Similarity=0.070 Sum_probs=28.6
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHC---CCeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAM---GVKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~---g~~Vi~~~~~~ 217 (361)
+.+++++|+|+|.+|.=.+.++..+ |.+|.++.+.+
T Consensus 16 ~~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 16 EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred ccCCeEEEECCChHHHHHHHHhHhhcccccccceecccc
Confidence 3457899999999999888776543 77999988764
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=84.58 E-value=0.71 Score=38.41 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=27.4
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCCeEEEEeCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
++|||+|+ |-+|...+..+...|..++++...
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~ 35 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTR 35 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCc
Confidence 47999998 999999999999999988776544
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=84.32 E-value=0.43 Score=40.14 Aligned_cols=31 Identities=35% Similarity=0.593 Sum_probs=28.3
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
|+|+|+|..|+.++..|...|++|+++...+
T Consensus 26 VvVIG~G~aGl~aA~~la~~G~~V~llEk~~ 56 (322)
T d1d4ca2 26 VVIIGSGGAGLAAAVSARDAGAKVILLEKEP 56 (322)
T ss_dssp EEEECSSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 8999999999999999999999999998654
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=84.21 E-value=0.53 Score=36.01 Aligned_cols=91 Identities=14% Similarity=0.120 Sum_probs=53.9
Q ss_pred EEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCc------hhHHHHHHHc-CC--cEEecCCCHHHHHHhcCCccEEEEc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSP------SKKSEAIERL-GA--DSFLVSRDQDEMQAAMGTMDGIIDT 254 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~------~~~~~~~~~~-g~--~~v~~~~~~~~~~~~~~g~d~vid~ 254 (361)
+|.|+|+ |-+|+-.++++..+ ..++..+.... ++..+....+ +. ..+....+ ........|++|-+
T Consensus 3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dvvf~a 79 (179)
T d2g17a1 3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSD---VRDFSADVDVVFLA 79 (179)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESC---GGGTCTTCCEEEEC
T ss_pred EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchh---hhhhhcccceeecc
Confidence 5889998 99999999999988 55765553221 1111111111 11 01111111 11223478999999
Q ss_pred CCCcccHHHHHHhhccCCEEEEecC
Q 018094 255 VSAVHPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 255 ~g~~~~~~~~~~~l~~~G~~v~~g~ 279 (361)
.+...........+..+-++++.+.
T Consensus 80 lp~~~s~~~~~~~~~~~~~vIDlSa 104 (179)
T d2g17a1 80 TAHEVSHDLAPQFLQAGCVVFDLSG 104 (179)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred ccchhHHHHhhhhhhcCceeecccc
Confidence 9987655566666777778888753
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.21 E-value=0.4 Score=38.14 Aligned_cols=30 Identities=30% Similarity=0.290 Sum_probs=27.4
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
|+|+|+|+.|+.++..|..+|.+|.++...
T Consensus 6 viVIG~GpaGl~aA~~aa~~G~kV~viE~~ 35 (235)
T d1h6va1 6 LIIIGGGSGGLAAAKEAAKFDKKVMVLDFV 35 (235)
T ss_dssp EEEECCSHHHHHHHHHHGGGCCCEEEECCC
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 788999999999999999999999999743
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=84.18 E-value=1.4 Score=32.18 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=43.1
Q ss_pred CEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcC-------Cc-EEecCCCHHHHHHhcCCccEEEEcC
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLG-------AD-SFLVSRDQDEMQAAMGTMDGIIDTV 255 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g-------~~-~v~~~~~~~~~~~~~~g~d~vid~~ 255 (361)
.+|-|+|+|.+|...+.++...+. +++.++..+++....+..+. .. .+....+. +...+.|+|+-++
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~----~~~~~advvvita 77 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY----ADTANSDVIVVTS 77 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG----GGGTTCSEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcH----HHhcCCCEEEEee
Confidence 368889999999888877766665 88888877765433323321 11 11111111 1134689999998
Q ss_pred CCc
Q 018094 256 SAV 258 (361)
Q Consensus 256 g~~ 258 (361)
|.+
T Consensus 78 g~~ 80 (142)
T d1uxja1 78 GAP 80 (142)
T ss_dssp SCC
T ss_pred ecc
Confidence 864
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.17 E-value=4.2 Score=33.84 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=30.3
Q ss_pred CCCCEEEEEcc-chHHHHHHHHHHHCCCeEEEEeC
Q 018094 182 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST 215 (361)
Q Consensus 182 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~Vi~~~~ 215 (361)
...+++||+|+ |-+|...+..+...|.+|+++++
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 34578999998 99999999999999999999975
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=84.12 E-value=0.44 Score=40.19 Aligned_cols=32 Identities=28% Similarity=0.270 Sum_probs=28.7
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
|||+|+|..|+.|+.-|...|++|+++.....
T Consensus 8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~~ 39 (336)
T d2bs2a2 8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (336)
T ss_dssp EEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred EEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 89999999999999999999999999986543
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=83.79 E-value=0.77 Score=37.30 Aligned_cols=96 Identities=17% Similarity=0.123 Sum_probs=56.9
Q ss_pred CCCCCCEEEEEccchHHHHHHHHHHHC-CCeEEEEeCCchhHH---HHHHHcCCc-EE-ecCCCHHHHHHhcCCccEEEE
Q 018094 180 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKS---EAIERLGAD-SF-LVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 180 ~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~Vi~~~~~~~~~~---~~~~~~g~~-~v-~~~~~~~~~~~~~~g~d~vid 253 (361)
.+....+||=+|+| .|..+..+++.+ +.++++++.+ +... +..++.|.. .+ +...+ .......++|+++-
T Consensus 78 d~~~~~~vlDvG~G-~G~~~~~l~~~~P~~~~~~~Dlp-~~~~~a~~~~~~~~~~~ri~~~~~d--~~~~~p~~~D~v~~ 153 (256)
T d1qzza2 78 DWSAVRHVLDVGGG-NGGMLAAIALRAPHLRGTLVELA-GPAERARRRFADAGLADRVTVAEGD--FFKPLPVTADVVLL 153 (256)
T ss_dssp CCTTCCEEEEETCT-TSHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHTTCTTTEEEEECC--TTSCCSCCEEEEEE
T ss_pred CCccCCEEEEECCC-CCHHHHHHHHhhcCcEEEEecCh-HHHHHHHHHHhhcCCcceeeeeeee--ccccccccchhhhc
Confidence 35677788878774 467888888887 6699888863 3221 122333432 11 11111 11122347898875
Q ss_pred cCCC-----c---ccHHHHHHhhccCCEEEEecC
Q 018094 254 TVSA-----V---HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 254 ~~g~-----~---~~~~~~~~~l~~~G~~v~~g~ 279 (361)
..-- + ..++.+.+.|+|+|+++.+..
T Consensus 154 ~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~ 187 (256)
T d1qzza2 154 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 187 (256)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence 4221 1 235668889999999998864
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=83.69 E-value=4.4 Score=33.46 Aligned_cols=56 Identities=21% Similarity=0.223 Sum_probs=39.3
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHHcCCcEEe
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAIERLGADSFL 233 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~--~~~~~~~~~g~~~v~ 233 (361)
.+.+.++++|+...+|.-|++++..++.+|.+.+++..... .....++.+|++.+.
T Consensus 55 ~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~ 112 (310)
T d1y7la1 55 DGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVL 112 (310)
T ss_dssp TTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred cCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEe
Confidence 34457777766667799999999999999996666554332 234445778886554
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=83.52 E-value=0.69 Score=38.52 Aligned_cols=95 Identities=16% Similarity=0.109 Sum_probs=54.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC---------c-EEecCCCHHHHHHhcCCccE
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA---------D-SFLVSRDQDEMQAAMGTMDG 250 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~---------~-~v~~~~~~~~~~~~~~g~d~ 250 (361)
...++|||+|+|. |..+-.+++..+. +|.++.-++ ...++++++-. . .++..+..+.+++..+.+|+
T Consensus 88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp-~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 165 (295)
T d1inla_ 88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDG-LVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDV 165 (295)
T ss_dssp SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCH-HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCH-HHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCE
Confidence 4567899998743 2335566676665 566655554 44556665421 0 12222222344444457999
Q ss_pred EEEcC-C----------CcccHHHHHHhhccCCEEEEec
Q 018094 251 IIDTV-S----------AVHPLMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 251 vid~~-g----------~~~~~~~~~~~l~~~G~~v~~g 278 (361)
||--. . ....+..+.+.|+++|.++.=.
T Consensus 166 Ii~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~ 204 (295)
T d1inla_ 166 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 204 (295)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence 87421 1 1123567888999999998654
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.94 E-value=2.2 Score=34.85 Aligned_cols=93 Identities=15% Similarity=0.078 Sum_probs=52.4
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-Cc---------------EEecCCCHHHHHHhc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAIERLG-AD---------------SFLVSRDQDEMQAAM 245 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~~~~~g-~~---------------~v~~~~~~~~~~~~~ 245 (361)
...++|||+|+|.-+. +-.+++.-..+|.++.- +.+..++++++- .. .++..+...+++. .
T Consensus 71 ~~p~~vLiiG~G~G~~-~~~~l~~~~~~v~~VEi-D~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~ 147 (276)
T d1mjfa_ 71 PKPKRVLVIGGGDGGT-VREVLQHDVDEVIMVEI-DEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N 147 (276)
T ss_dssp SCCCEEEEEECTTSHH-HHHHTTSCCSEEEEEES-CHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred CCCceEEEecCCchHH-HHHHHHhCCceEEEecC-CHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc-c
Confidence 5668899998643222 33445543347766554 455556666532 10 1222222234433 4
Q ss_pred CCccEEEE-cCCC---------cccHHHHHHhhccCCEEEEe
Q 018094 246 GTMDGIID-TVSA---------VHPLMPLIGLLKSQGKLVLV 277 (361)
Q Consensus 246 ~g~d~vid-~~g~---------~~~~~~~~~~l~~~G~~v~~ 277 (361)
+++|+||- .... ...++.+.+.|+++|.++.=
T Consensus 148 ~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q 189 (276)
T d1mjfa_ 148 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 189 (276)
T ss_dssp CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEe
Confidence 68999874 3221 12356788899999998754
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=82.74 E-value=0.56 Score=38.51 Aligned_cols=33 Identities=36% Similarity=0.372 Sum_probs=27.2
Q ss_pred CEEEEEccchHHHHHHHH-HHHCCCeEEEEeCCc
Q 018094 185 MHVGVVGLGGLGHVAVKF-AKAMGVKVTVISTSP 217 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~l-a~~~g~~Vi~~~~~~ 217 (361)
..|+|+|+|+.|+.++.. |+..|.+|.++...+
T Consensus 34 ~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 34 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred CCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence 349999999999988765 555799999999764
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=82.73 E-value=0.6 Score=36.94 Aligned_cols=33 Identities=18% Similarity=0.229 Sum_probs=26.9
Q ss_pred EEEEEccchHHHHHHHHHHH--CCCeEEEEeCCch
Q 018094 186 HVGVVGLGGLGHVAVKFAKA--MGVKVTVISTSPS 218 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~--~g~~Vi~~~~~~~ 218 (361)
+|+|+|+|+.|+.++..++. .|.+|+++...+.
T Consensus 3 kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred eEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 69999999999999986654 4779999977643
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=82.57 E-value=1.7 Score=31.95 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=45.3
Q ss_pred CCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHc-------CCcE-EecCCCHHHHHHhcCCccEEEE
Q 018094 183 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERL-------GADS-FLVSRDQDEMQAAMGTMDGIID 253 (361)
Q Consensus 183 ~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~-------g~~~-v~~~~~~~~~~~~~~g~d~vid 253 (361)
|..+|-|+|+|.+|...+.++...+. ++.+++..+++....+..+ +... +....+ .+...+.|+|+-
T Consensus 2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~----~~~~~~advvvi 77 (150)
T d1t2da1 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT----YDDLAGADVVIV 77 (150)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC----GGGGTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc----ccccCCCcEEEE
Confidence 45689999999999988888888776 8888887665433222222 1211 111111 122357899999
Q ss_pred cCCCc
Q 018094 254 TVSAV 258 (361)
Q Consensus 254 ~~g~~ 258 (361)
++|..
T Consensus 78 tag~~ 82 (150)
T d1t2da1 78 TAGFT 82 (150)
T ss_dssp CCSCS
T ss_pred ecccc
Confidence 88854
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.37 E-value=0.72 Score=38.95 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=28.6
Q ss_pred EE-EEEcc-chHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 186 HV-GVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 186 ~V-lI~Ga-g~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
+| ||+|+ |-+|...+..+...|.+|+++++..
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 46 99998 9999999999999999999999854
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=82.22 E-value=0.71 Score=37.40 Aligned_cols=30 Identities=30% Similarity=0.348 Sum_probs=27.8
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCC
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTS 216 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~ 216 (361)
++|+|+|+.|+.++..|..+|++|.++...
T Consensus 4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~ 33 (259)
T d1onfa1 4 LIVIGGGSGGMAAARRAARHNAKVALVEKS 33 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 788999999999999999999999999864
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=82.12 E-value=0.65 Score=40.24 Aligned_cols=33 Identities=24% Similarity=0.341 Sum_probs=26.7
Q ss_pred EEEEEccchHHHHHHHHHHH------CCCeEEEEeCCch
Q 018094 186 HVGVVGLGGLGHVAVKFAKA------MGVKVTVISTSPS 218 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~------~g~~Vi~~~~~~~ 218 (361)
.|+|+|+|+.|++++..+.. .|.+|.++.+...
T Consensus 34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~ 72 (380)
T d2gmha1 34 DVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH 72 (380)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence 38999999999888766554 7899999997643
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=82.09 E-value=1.1 Score=34.63 Aligned_cols=37 Identities=24% Similarity=0.352 Sum_probs=30.3
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEA 223 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~~~~~~ 223 (361)
+|.|+|.|-+|+..+..+ +.|.+|+.++.++++...+
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l 38 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI 38 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence 477889999999887666 5799999999988776555
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=82.03 E-value=0.44 Score=37.81 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=27.8
Q ss_pred CEEEEEccchHHHHHHHHHHHCC-------CeEEEEeCCch
Q 018094 185 MHVGVVGLGGLGHVAVKFAKAMG-------VKVTVISTSPS 218 (361)
Q Consensus 185 ~~VlI~Gag~vG~~a~~la~~~g-------~~Vi~~~~~~~ 218 (361)
-+|+|+|+|+.|++++..+...| .+|.+....+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence 37999999999999998887766 57888887653
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=82.00 E-value=0.64 Score=38.49 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=26.1
Q ss_pred EEEEEccchHHHHHHHHHHHCCC-eEEEEeCC
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~ 216 (361)
.|+|+|+|.+|++++.-+...|. +|+++.++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 49999999999988888777886 68888765
|
| >d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Salmonella typhimurium [TaxId: 90371]
Probab=81.97 E-value=9.5 Score=30.98 Aligned_cols=55 Identities=25% Similarity=0.332 Sum_probs=37.9
Q ss_pred hCCCCCCCEEEEEccchHHHHHHHHHHHCCCeEEEEeCC--chhHHHHHHHcCCcEE
Q 018094 178 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS--PSKKSEAIERLGADSF 232 (361)
Q Consensus 178 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~--~~~~~~~~~~~g~~~v 232 (361)
.+.++++.+|+..++|.-|.+++..++.+|.+++++... ++.....++.+|++-+
T Consensus 55 ~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~ 111 (302)
T d1fcja_ 55 RGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLV 111 (302)
T ss_dssp HTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEE
T ss_pred cCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceE
Confidence 345677777666677999999999999999865555543 3334455577777543
|
| >d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Malate oxidoreductase (malic enzyme) species: Thermotoga maritima [TaxId: 2336]
Probab=81.97 E-value=1.7 Score=34.22 Aligned_cols=48 Identities=25% Similarity=0.369 Sum_probs=37.0
Q ss_pred hhhhHHHHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCC
Q 018094 169 ITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 216 (361)
Q Consensus 169 ~~a~~~l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~ 216 (361)
.+-+.+++...+--..++++++|+|..|...++++...+. +++.+++.
T Consensus 11 Agll~a~~~~g~~l~d~riv~~GAGsAg~gia~~l~~~~~~~i~~~D~~ 59 (222)
T d1vl6a1 11 AAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 59 (222)
T ss_dssp HHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHhCCChhhcEEEEEChHHHHHHHHHHHHHhcccceEeecce
Confidence 3345566666654577889999999999999999988887 77777764
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=81.80 E-value=0.21 Score=37.88 Aligned_cols=117 Identities=16% Similarity=0.134 Sum_probs=64.5
Q ss_pred EEEEEcc-chHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHHcC----CcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAIERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~-g~~Vi~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
+|.|+|+ |-+|++.++++... +++++......... .+-+.+| ... ....-.+........+|+++|++....
T Consensus 6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~-~~g~d~~~~~~~~~-~~~~~~~~~~~~~~~~DViIDFs~p~~ 83 (162)
T d1diha1 6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSS-LLGSDAGELAGAGK-TGVTVQSSLDAVKDDFDVFIDFTRPEG 83 (162)
T ss_dssp EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCT-TCSCCTTCSSSSSC-CSCCEESCSTTTTTSCSEEEECSCHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccch-hccchhhhhhcccc-CCceeeccHHHHhcccceEEEeccHHH
Confidence 5788897 99999999988875 66776665543211 0000111 000 000000111233457899999977654
Q ss_pred cHHHHHHhhccCCEEEEecCCCCCc-ccChHHHhhCCcEEEecccCC
Q 018094 260 PLMPLIGLLKSQGKLVLVGAPEKPL-ELPAFSLLMGRKIVGGSMIGG 305 (361)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~ 305 (361)
....++.....|.=+.+|..+-.. ++....-..+.+.+.-....+
T Consensus 84 -~~~~~~~a~~~~~~~ViGTTG~~~~~~~~i~~~a~~ipi~~apN~S 129 (162)
T d1diha1 84 -TLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFS 129 (162)
T ss_dssp -HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSCEEECSCCC
T ss_pred -HHHHHHHHHhccceeEEecCCCcHHHHHHHHHHcCCCCEEEEcccc
Confidence 667777777788888888655321 222222233455555444444
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=81.77 E-value=0.9 Score=31.86 Aligned_cols=36 Identities=22% Similarity=0.107 Sum_probs=28.5
Q ss_pred CCCCEEEEEccchHHHHHHHHHHHCC---CeEEEEeCCc
Q 018094 182 KPGMHVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSP 217 (361)
Q Consensus 182 ~~g~~VlI~Gag~vG~~a~~la~~~g---~~Vi~~~~~~ 217 (361)
+.+++++|+|+|.+|.=.+..++.++ .+|+++.+.+
T Consensus 18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 45678999999999998887777654 4788887754
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=81.53 E-value=3.3 Score=31.90 Aligned_cols=72 Identities=25% Similarity=0.297 Sum_probs=41.4
Q ss_pred HHhhCCCCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCC-cEEecCCCHHHHHHhcCCccEEE
Q 018094 175 LRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAIERLGA-DSFLVSRDQDEMQAAMGTMDGII 252 (361)
Q Consensus 175 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~g~d~vi 252 (361)
+...+. -.|++||=.|+|. |.+++. +...|+ +|+.++-+++... .+++.-. ..++.. + +..+.+.+|+||
T Consensus 41 ~~~~~d-l~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~-~ar~N~~~~~~~~~-D---~~~l~~~fD~Vi 112 (197)
T d1ne2a_ 41 IYNDGN-IGGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIE-TAKRNCGGVNFMVA-D---VSEISGKYDTWI 112 (197)
T ss_dssp HHHHTS-SBTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHH-HHHHHCTTSEEEEC-C---GGGCCCCEEEEE
T ss_pred HHHcCC-CCCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHH-HHHHccccccEEEE-e---hhhcCCcceEEE
Confidence 334454 3689999998753 444444 344565 7988888776654 3344322 233322 2 223456799988
Q ss_pred Ec
Q 018094 253 DT 254 (361)
Q Consensus 253 d~ 254 (361)
-.
T Consensus 113 ~N 114 (197)
T d1ne2a_ 113 MN 114 (197)
T ss_dssp EC
T ss_pred eC
Confidence 54
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=81.24 E-value=1.4 Score=33.48 Aligned_cols=88 Identities=20% Similarity=0.234 Sum_probs=51.1
Q ss_pred EEEEEcc-chHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHH---cCCcEEecCCCHHHHHHhcCCccEEEEcCCCccc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAIER---LGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 260 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g-~~Vi~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~~ 260 (361)
+|-|+|+ |-+|+-.++++..+- .++..+.+.......+... +-.+..+...+.+.+ ..+.|++|-+.++...
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~---~~~~dvvf~a~p~~~s 79 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKV---SKNCDVLFTALPAGAS 79 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHH---HHHCSEEEECCSTTHH
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhHh---ccccceEEEccccHHH
Confidence 5889998 999999999988764 4777776654432222111 111112222232322 2368999999998763
Q ss_pred HHHHHHhhccCCEEEEec
Q 018094 261 LMPLIGLLKSQGKLVLVG 278 (361)
Q Consensus 261 ~~~~~~~l~~~G~~v~~g 278 (361)
. ..... ..+-++++.+
T Consensus 80 ~-~~~~~-~~~~~VIDlS 95 (176)
T d1vkna1 80 Y-DLVRE-LKGVKIIDLG 95 (176)
T ss_dssp H-HHHTT-CCSCEEEESS
T ss_pred H-HHHHh-hccceEEecC
Confidence 3 22322 3456676663
|
| >d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GidA-like domain: GidA-related protein TTHA1897 species: Thermus thermophilus [TaxId: 274]
Probab=81.22 E-value=1 Score=35.93 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=28.9
Q ss_pred EEEEccchHHHHHHHHHHHCCCeEEEEeCCch
Q 018094 187 VGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS 218 (361)
Q Consensus 187 VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~~ 218 (361)
|+|+|+|..|+-|+..+..+|+++.++..+.+
T Consensus 5 VIVIGgG~AG~eAA~~aAR~G~ktllit~~~~ 36 (230)
T d2cula1 5 VLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 36 (230)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEEEeccc
Confidence 78899999999999999999999999987643
|
| >d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: GroES domain: Chaperonin-10 (GroES) species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=81.22 E-value=0.83 Score=31.15 Aligned_cols=24 Identities=29% Similarity=0.253 Sum_probs=18.8
Q ss_pred ccEEEEEeCCCCC----------CCCCCCEEEEc
Q 018094 74 IVGVVTEVGSKVS----------KFKVGDKVGVG 97 (361)
Q Consensus 74 ~~G~V~~vG~~~~----------~~~~Gd~V~~~ 97 (361)
..|+|+++|+... .+++||+|+..
T Consensus 38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~ 71 (99)
T d1p3ha_ 38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS 71 (99)
T ss_dssp EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence 3699999998642 37899999753
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=81.22 E-value=0.48 Score=35.33 Aligned_cols=91 Identities=15% Similarity=0.185 Sum_probs=56.3
Q ss_pred CCEEEEEcc-chHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHHcCCcEEecCCCHHHHHHhcCCccEEEEcCCCcc
Q 018094 184 GMHVGVVGL-GGLGHVAVKFAKAMGV---KVTVISTSPSKKSEAIERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 259 (361)
Q Consensus 184 g~~VlI~Ga-g~vG~~a~~la~~~g~---~Vi~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~g~d~vid~~g~~~ 259 (361)
|-+|.|+|+ |-+|.-.++++..... ++...+++......+ .+.......... ........|++|-+.+...
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~--~~~~~~~~~~~~---~~~~~~~~d~~f~~~~~~~ 75 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL--KFKDQDITIEET---TETAFEGVDIALFSAGSST 75 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEE--EETTEEEEEEEC---CTTTTTTCSEEEECSCHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccc--cccCCccccccc---chhhhhhhhhhhhccCccc
Confidence 347899998 9999999999987742 555555432211000 011111100000 0011236899999999887
Q ss_pred cHHHHHHhhccCCEEEEecC
Q 018094 260 PLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 260 ~~~~~~~~l~~~G~~v~~g~ 279 (361)
+.....+....+-++++.+.
T Consensus 76 s~~~~~~~~~~~~~VIDlSs 95 (154)
T d2gz1a1 76 SAKYAPYAVKAGVVVVDNTS 95 (154)
T ss_dssp HHHHHHHHHHTTCEEEECSS
T ss_pred hhhHHhhhccccceehhcCh
Confidence 67777778888999999865
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=81.19 E-value=0.88 Score=38.90 Aligned_cols=71 Identities=13% Similarity=0.137 Sum_probs=42.7
Q ss_pred EEEEEcc-chHHHHHHHHHHHCCCeEEE-EeCCchh--HHHHHHHcC-C---cE-EecCCCHHHHHHhcC--CccEEEEc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAMGVKVTV-ISTSPSK--KSEAIERLG-A---DS-FLVSRDQDEMQAAMG--TMDGIIDT 254 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~g~~Vi~-~~~~~~~--~~~~~~~~g-~---~~-v~~~~~~~~~~~~~~--g~d~vid~ 254 (361)
+|||+|+ |-+|...+..+...|.+|++ ++..... ...+ +.+. . +. ..|-.+.+.+..+.. .+|+||.+
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHH-HhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 5899997 99999999988888886544 4332111 1111 1221 1 11 124445555555433 68999999
Q ss_pred CCC
Q 018094 255 VSA 257 (361)
Q Consensus 255 ~g~ 257 (361)
++.
T Consensus 81 Aa~ 83 (361)
T d1kewa_ 81 AAE 83 (361)
T ss_dssp CSC
T ss_pred ccc
Confidence 874
|
| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=80.69 E-value=0.87 Score=36.89 Aligned_cols=32 Identities=22% Similarity=0.428 Sum_probs=28.6
Q ss_pred EEEEEccchHHHHHHHHHHHCCCeEEEEeCCc
Q 018094 186 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 217 (361)
Q Consensus 186 ~VlI~Gag~vG~~a~~la~~~g~~Vi~~~~~~ 217 (361)
.++|+|+|+.|+.++..+..+|.+|.++...+
T Consensus 44 DvvVIGgG~aG~~aA~~~a~~G~kv~vve~~~ 75 (261)
T d1mo9a1 44 DAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWP 75 (261)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccC
Confidence 38888999999999999999999999998754
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=80.39 E-value=1.1 Score=32.96 Aligned_cols=88 Identities=18% Similarity=0.194 Sum_probs=49.8
Q ss_pred EEEEEcc-chHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHHcCCcE--EecCCCHHHHHHhcCCccEEEEcCCCc
Q 018094 186 HVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAIERLGADS--FLVSRDQDEMQAAMGTMDGIIDTVSAV 258 (361)
Q Consensus 186 ~VlI~Ga-g~vG~~a~~la~~~----g~~Vi~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~g~d~vid~~g~~ 258 (361)
+|.|+|+ |-+|+-.++++... ..++..+.++....... .++.+. +....+.+ .....|++|-|+++.
T Consensus 2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~--~~~~~~~~~~~~~~~~----~~~~~DvvF~alp~~ 75 (147)
T d1mb4a1 2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP--NFGKDAGMLHDAFDIE----SLKQLDAVITCQGGS 75 (147)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC--CSSSCCCBCEETTCHH----HHTTCSEEEECSCHH
T ss_pred EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc--ccCCcceeeecccchh----hhccccEEEEecCch
Confidence 5889998 99999999866432 24666655543321110 111111 11111211 124689999999988
Q ss_pred ccHHHHHHhhccCC--EEEEecC
Q 018094 259 HPLMPLIGLLKSQG--KLVLVGA 279 (361)
Q Consensus 259 ~~~~~~~~~l~~~G--~~v~~g~ 279 (361)
.+......++..+- .+++.+.
T Consensus 76 ~s~~~~~~l~~~g~~~~VIDlSs 98 (147)
T d1mb4a1 76 YTEKVYPALRQAGWKGYWIDAAS 98 (147)
T ss_dssp HHHHHHHHHHHTTCCSEEEESSS
T ss_pred HHHHHhHHHHHcCCceEEEeCCc
Confidence 75555555555553 3777753
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=80.39 E-value=1.4 Score=37.13 Aligned_cols=74 Identities=18% Similarity=0.195 Sum_probs=45.1
Q ss_pred CEEEEEcc-chHHHHHHHHHHHCCC--eEEEEeCCchh-HHHHHHHc-C--CcEE-ecCCCHHHHHHhcCCccEEEEcCC
Q 018094 185 MHVGVVGL-GGLGHVAVKFAKAMGV--KVTVISTSPSK-KSEAIERL-G--ADSF-LVSRDQDEMQAAMGTMDGIIDTVS 256 (361)
Q Consensus 185 ~~VlI~Ga-g~vG~~a~~la~~~g~--~Vi~~~~~~~~-~~~~~~~~-g--~~~v-~~~~~~~~~~~~~~g~d~vid~~g 256 (361)
.+|||+|+ |-+|...+..+...|. +|++++..... .....+.+ + .+.+ .|-.+.+.+.++..+.|.|+.++.
T Consensus 3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a~ 82 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYAA 82 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhhh
Confidence 46999998 9999998888877776 45554422111 00100111 1 1211 344566777777788999988876
Q ss_pred Cc
Q 018094 257 AV 258 (361)
Q Consensus 257 ~~ 258 (361)
..
T Consensus 83 ~~ 84 (346)
T d1oc2a_ 83 ES 84 (346)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=80.31 E-value=2.9 Score=35.01 Aligned_cols=97 Identities=27% Similarity=0.261 Sum_probs=56.3
Q ss_pred CCCCCEEEEEccchHHHHHHHHHHHCCC-eEEEEeCCchhHHHH---HHHcCCc---EEecCCCHHHHHHh---cCCccE
Q 018094 181 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA---IERLGAD---SFLVSRDQDEMQAA---MGTMDG 250 (361)
Q Consensus 181 ~~~g~~VlI~Gag~vG~~a~~la~~~g~-~Vi~~~~~~~~~~~~---~~~~g~~---~v~~~~~~~~~~~~---~~g~d~ 250 (361)
+++|++||=.++|. |..++.+|+. |+ +|+.++.++.....+ ++..|.. .++..+-.+++..+ ...||+
T Consensus 143 ~~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~ 220 (324)
T d2as0a2 143 VQPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI 220 (324)
T ss_dssp CCTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence 57899998876532 2233344443 66 899999887754333 2345542 22222223343332 247999
Q ss_pred EEEcCCCc---------------ccHHHHHHhhccCCEEEEecC
Q 018094 251 IIDTVSAV---------------HPLMPLIGLLKSQGKLVLVGA 279 (361)
Q Consensus 251 vid~~g~~---------------~~~~~~~~~l~~~G~~v~~g~ 279 (361)
|+--.... ..+..++++|+|||.++.+..
T Consensus 221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~ 264 (324)
T d2as0a2 221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 264 (324)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 98522211 134567789999999998853
|