Query 018097
Match_columns 361
No_of_seqs 219 out of 1756
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 09:54:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018097.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018097hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 1.6E-84 5.4E-89 626.3 27.0 342 9-352 3-350 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 5E-78 1.7E-82 572.6 21.6 299 51-360 3-307 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1E-75 3.5E-80 556.1 26.7 290 50-346 5-308 (312)
4 1odm_A Isopenicillin N synthas 100.0 6.6E-73 2.3E-77 540.8 27.3 289 45-347 2-324 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 6.7E-73 2.3E-77 536.1 17.4 277 50-348 3-306 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 3.7E-67 1.3E-71 489.6 25.5 260 51-347 3-277 (280)
7 3dkq_A PKHD-type hydroxylase S 94.0 0.15 5.2E-06 45.5 7.9 80 213-310 100-195 (243)
8 2rg4_A Uncharacterized protein 91.9 2.2 7.4E-05 37.1 12.1 43 258-312 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 88.2 1.3 4.4E-05 39.4 7.6 79 214-309 119-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 83.8 1.9 6.4E-05 37.6 6.2 47 260-310 170-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 81.4 3.4 0.00012 35.9 6.8 104 185-309 94-211 (216)
12 3s57_A Alpha-ketoglutarate-dep 78.9 5.2 0.00018 34.4 7.1 79 214-307 102-200 (204)
13 3tht_A Alkylated DNA repair pr 72.9 4.5 0.00015 37.8 5.5 104 213-325 199-327 (345)
14 2iuw_A Alkylated repair protei 71.0 7.1 0.00024 34.3 6.1 83 213-308 127-228 (238)
15 3i3q_A Alpha-ketoglutarate-dep 70.4 6.9 0.00024 33.8 5.7 79 213-308 106-201 (211)
16 2dbn_A Hypothetical protein YB 57.0 4.8 0.00016 38.9 2.3 53 49-108 98-150 (461)
17 3o2g_A Gamma-butyrobetaine dio 48.6 7 0.00024 37.0 2.0 52 51-110 122-173 (388)
18 1m5a_B Insulin B chain; alpha 42.7 26 0.00089 20.2 2.9 17 70-86 10-26 (30)
19 3rcq_A Aspartyl/asparaginyl be 41.8 32 0.0011 29.2 4.9 68 229-313 113-187 (197)
20 1e5r_A Proline oxidase; oxidor 40.4 21 0.00072 32.3 3.7 64 230-308 103-175 (290)
21 2opi_A L-fuculose-1-phosphate 39.1 15 0.00053 31.4 2.5 36 51-92 125-160 (212)
22 4ay7_A Methylcobalamin\: coenz 36.7 52 0.0018 30.2 6.0 47 60-109 298-348 (348)
23 1e4c_P L-fuculose 1-phosphate 33.6 21 0.00073 30.5 2.5 36 51-92 122-157 (215)
24 2fk5_A Fuculose-1-phosphate al 33.1 27 0.00091 29.6 3.0 36 51-92 117-153 (200)
25 1otj_A Alpha-ketoglutarate-dep 31.0 37 0.0013 30.1 3.8 50 50-108 16-65 (283)
26 1pvt_A Sugar-phosphate aldolas 29.7 30 0.001 30.1 2.9 36 51-92 161-196 (238)
27 1otf_A 4-oxalocrotonate tautom 28.8 39 0.0013 21.9 2.7 30 53-82 1-30 (62)
28 2x4k_A 4-oxalocrotonate tautom 28.2 43 0.0015 21.6 2.9 23 178-200 18-40 (63)
29 3ocr_A Class II aldolase/adduc 27.6 27 0.00091 31.3 2.1 37 51-92 156-192 (273)
30 2opa_A Probable tautomerase YW 27.6 43 0.0015 21.7 2.7 30 53-82 1-30 (61)
31 3m20_A 4-oxalocrotonate tautom 25.8 70 0.0024 21.0 3.6 28 53-81 1-28 (62)
32 2v9l_A Rhamnulose-1-phosphate 25.8 32 0.0011 30.7 2.3 36 51-92 179-214 (274)
33 2da7_A Zinc finger homeobox pr 25.4 56 0.0019 22.9 3.0 40 167-206 15-54 (71)
34 2ww6_A Fibritin, T4 fibritin; 25.3 34 0.0012 19.0 1.4 13 252-264 12-24 (27)
35 1oih_A Putative alkylsulfatase 24.8 63 0.0021 28.9 4.2 51 50-109 26-77 (301)
36 3abf_A 4-oxalocrotonate tautom 23.2 64 0.0022 21.0 3.0 23 179-201 17-39 (64)
37 2irp_A Putative aldolase class 22.8 38 0.0013 28.6 2.2 36 50-92 138-176 (208)
38 2opw_A Phyhd1 protein; double- 22.2 1.5E+02 0.0053 25.8 6.2 35 74-109 7-41 (291)
39 3jsy_A Acidic ribosomal protei 22.1 1.5E+02 0.0051 25.3 5.8 41 66-106 3-44 (213)
40 3ry0_A Putative tautomerase; o 21.4 65 0.0022 21.3 2.7 29 53-81 1-29 (65)
41 1gyx_A YDCE, B1461, hypothetic 20.7 82 0.0028 21.7 3.3 45 53-97 1-51 (76)
42 3ghf_A Septum site-determining 20.3 99 0.0034 23.8 3.9 36 54-95 51-86 (120)
43 3kt7_A PKHD-type hydroxylase T 20.0 1.2E+02 0.0042 30.3 5.3 83 214-311 126-230 (633)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=1.6e-84 Score=626.33 Aligned_cols=342 Identities=34% Similarity=0.659 Sum_probs=302.2
Q ss_pred cccchHHHHhcCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEE
Q 018097 9 PIVRVQSLSESGSTDIPDRYVKPPAERPVLPNS--RINGDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQ 86 (361)
Q Consensus 9 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~ 86 (361)
+.++||+|+++++++||++|++|++++|..... ..+ .....+||||||+.+.++++++|.+++++|.+||++|||||
T Consensus 3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~-~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~ 81 (356)
T 1gp6_A 3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEK-KEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMH 81 (356)
T ss_dssp CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHH-CCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEE
T ss_pred CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccc-cccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEE
Confidence 346799999999999999999998888764210 000 00123699999999987788888999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcCCCC--CcccccCCCCccCCcccCccccccccccCCCccCCCCCCCC
Q 018097 87 VVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPK--TYEGYGSRLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPAT 164 (361)
Q Consensus 87 l~nhGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~--~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~ 164 (361)
|+||||+.++++++++.+++||+||.|+|+++..... .++||+........+..||+|+|.+...|......|.||..
T Consensus 82 v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~ 161 (356)
T 1gp6_A 82 LINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKT 161 (356)
T ss_dssp EESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCS
T ss_pred EeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCc
Confidence 9999999999999999999999999999999986654 58999876554455678999999876655443456899999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCHHHHHHhhCCC-CCceeEEeecCCCCCCCCCCccccCccCCCCceEE
Q 018097 165 PASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGGD-NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLL 243 (361)
Q Consensus 165 ~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~-~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL 243 (361)
+++|++.+++|+++|.+|+.+||++|+++||+++++|.+.+... ...+.||+||||||++++..+|+++|||+|+||||
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 99999999999999999999999999999999999999988620 13468999999999999999999999999999999
Q ss_pred ecCCCCCCceeecCCeEEEecCCCCeEEEEeCchhhhhhcCccccccceeccCCCCCeeEEEEeecCCCCc-ceecCccc
Q 018097 244 LPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDI-PIEPVKEL 322 (361)
Q Consensus 244 ~~q~~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~pl~~~ 322 (361)
+ ||+++||||+++|+|++|+|+||++||||||+||+||||+|||+.|||++++.++|||++||++|+.|+ +|.|++++
T Consensus 242 ~-qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~ 320 (356)
T 1gp6_A 242 L-HNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEM 320 (356)
T ss_dssp E-ECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGG
T ss_pred E-EcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhh
Confidence 9 889999999999999999999999999999999999999999999999999889999999999999999 99999999
Q ss_pred cCCCCCCCCCCccHHHHHHHHHhcCCCCCc
Q 018097 323 VTEESPSLYPPMTFDEYRLFIRTRGPKGKS 352 (361)
Q Consensus 323 v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~ 352 (361)
+++++|++|+++|++||+..++.++++++.
T Consensus 321 ~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~ 350 (356)
T 1gp6_A 321 VSVESPAKFPPRTFAQHIEHKLFGKEQEEL 350 (356)
T ss_dssp CCSSSCCSSCCEEHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCccCCCccHHHHHHHHHHhccCcch
Confidence 999999999999999999998877665543
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=5e-78 Score=572.58 Aligned_cols=299 Identities=37% Similarity=0.662 Sum_probs=263.6
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCcccccC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGS 130 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~ 130 (361)
+||||||+.+.+ .+|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+.
T Consensus 3 ~iPvIDls~l~~---~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~ 76 (319)
T 1w9y_A 3 NFPIISLDKVNG---VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEG 76 (319)
T ss_dssp CCCEEEGGGGGS---TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTT
T ss_pred CCCEEECcccCc---ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCc
Confidence 599999998853 24678999999999999999999999999999999999999999999999998643 357865
Q ss_pred CCCccCCcccCccccccccccCCCccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCHHHHHHhhCC-CC
Q 018097 131 RLGVEKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFGG-DN 209 (361)
Q Consensus 131 ~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~-~~ 209 (361)
... ..+..||+|+|.+...|.. ..|.||+.+++|++.+++|+++|.+|+.+|+++|+++||+++++|.+.+.. +.
T Consensus 77 ~~~--e~~~~d~ke~~~~~~~p~~--~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 77 VQA--EVTDMDWESTFFLKHLPIS--NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp CCC--CGGGCCCCEEEEEEEESCC--GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred ccc--cCCCCChhhheeeecCCcc--cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 422 2357899999987665542 357899999999999999999999999999999999999999999998864 22
Q ss_pred CceeEEeecCCCCCCCCCCccccCccCCCCceEEecC-CCCCCceeecCCeEEEecCCCCeEEEEeCchhhhhhcCcccc
Q 018097 210 IGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPD-HQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANYKS 288 (361)
Q Consensus 210 ~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~~q-~~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~~s 288 (361)
..+.+|+||||||++++..+|+++|||+|+||||+ | ++++||||+++|+|++|+|+||++||||||+||+||||+|||
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~-qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS 231 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLF-QDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKS 231 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEE-ESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEE-ecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeec
Confidence 34689999999999999899999999999999999 7 479999999999999999999999999999999999999999
Q ss_pred ccceeccCCCCCeeEEEEeecCCCCcceecCccccCCC---CCCCCCCccHHHHHHHHHhcCCCCCcc-ccccCCC
Q 018097 289 VEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEE---SPSLYPPMTFDEYRLFIRTRGPKGKSQ-VESMKSP 360 (361)
Q Consensus 289 ~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~---~p~~y~~~~~~ey~~~~~~~~~~~~~~-l~~~~~~ 360 (361)
+.|||++++.++|||++||++|+.|++|.|++++++++ +|++|+++|++||+..++++.+.++.. ++.+|+.
T Consensus 232 ~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 232 VMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp CCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred ccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 99999999889999999999999999999999999988 699999999999999999888877754 6666654
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1e-75 Score=556.05 Aligned_cols=290 Identities=23% Similarity=0.378 Sum_probs=254.2
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCccccc
Q 018097 50 INIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYG 129 (361)
Q Consensus 50 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~ 129 (361)
.+||||||+.+.+ .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++......++||.
T Consensus 5 ~~iPvIDls~~~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~ 80 (312)
T 3oox_A 5 SAIDPVSFSLYAK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYI 80 (312)
T ss_dssp CSSCCEETHHHHH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEE
T ss_pred CCCCeEEChHhcc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccccc
Confidence 4699999998743 367899999999999999999999999999999999999999999999999986544488996
Q ss_pred CCCCcc--CCcccCccccccccc-cCCC-----ccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCHHHH
Q 018097 130 SRLGVE--KGAILDWSDYYFLHY-RPCS-----LKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISEDRL 201 (361)
Q Consensus 130 ~~~~~~--~~~~~d~~e~~~~~~-~p~~-----~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~ 201 (361)
...... .....||+|+|.+.. .+.. ...+|.||+.+++||+.+++|+++|.+|+.+|+++|+++||+++++|
T Consensus 81 ~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 160 (312)
T 3oox_A 81 PFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFF 160 (312)
T ss_dssp CCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTT
T ss_pred cccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 543221 224679999886532 1211 12358999989999999999999999999999999999999999999
Q ss_pred HHhhCCCCCceeEEeecCCCCCCCCCCccccCccCCCCceEEecCCCCCCceee-cCCeEEEecCCCCeEEEEeCchhhh
Q 018097 202 QNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVR-KGDNWITVKPAKHAFIVNIGDQIQV 280 (361)
Q Consensus 202 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL~~q~~~~GLqV~-~~g~W~~V~p~pg~lvVnvGd~L~~ 280 (361)
.+.+... .+.+|+||||||++++..+|+++|||+|+||||+ ||+++||||+ ++|+|++|+|+||++||||||+||+
T Consensus 161 ~~~~~~~--~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~-qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 161 KPTVQDG--NSVLRLLHYPPIPKDATGVRAGAHGDINTITLLL-GAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp HHHHTTC--CCEEEEEEECCCSSCCC--CEEEECCCSSEEEEE-CCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHH
T ss_pred HHHhcCC--cceeeeEecCCCCCCcCCcCccceecCceEEEEe-EcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHH
Confidence 9998753 3689999999999876569999999999999999 9999999997 7899999999999999999999999
Q ss_pred hhcCccccccceeccCC----CCCeeEEEEeecCCCCcceecCccccCCCCCCCCC-CccHHHHHHHHHhc
Q 018097 281 LSNANYKSVEHRVAVNS----ANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYP-PMTFDEYRLFIRTR 346 (361)
Q Consensus 281 ~TnG~~~s~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~-~~~~~ey~~~~~~~ 346 (361)
||||+|||+.|||+.++ ..+|||++||++|+.|++|.|+++++++++|++|+ ++|++||+..+++.
T Consensus 238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 99999999999998763 46799999999999999999999999999999999 99999999988764
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=6.6e-73 Score=540.76 Aligned_cols=289 Identities=25% Similarity=0.376 Sum_probs=255.2
Q ss_pred CCCCCCCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHh-cCCCHHHHhhhcCCCC
Q 018097 45 GDDEKINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQF-FHSPMEVKQAYGNSPK 123 (361)
Q Consensus 45 ~~~~~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~f-F~lP~eeK~~~~~~~~ 123 (361)
++....+||||||+.|.++++++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 2 ~s~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~--- 75 (331)
T 1odm_A 2 GSVSKANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI--- 75 (331)
T ss_dssp -CCCBCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC---
T ss_pred CcccCCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh---
Confidence 344456799999999988888888999999999999999999999999 999999999999 9999999999975
Q ss_pred CcccccCCCCc--cCC------cccCccccccccccCCC----------ccCCCCCCCC--ChhhHHHHHHHHHHHHHHH
Q 018097 124 TYEGYGSRLGV--EKG------AILDWSDYYFLHYRPCS----------LKDFNKWPAT--PASCREVIDEYCKELVRLS 183 (361)
Q Consensus 124 ~~~Gy~~~~~~--~~~------~~~d~~e~~~~~~~p~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~la 183 (361)
+||...... ..+ ...||+|.|.+...... ...+|.||+. +++|++.+++|+++|.+|+
T Consensus 76 --~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~ 153 (331)
T 1odm_A 76 --RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLS 153 (331)
T ss_dssp --TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHH
T ss_pred --cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 566543221 111 46799999976532211 1246899987 8999999999999999999
Q ss_pred HHHHHHhHHhcCCCHHHHHHhhCCCCCceeEE--eecCC------C---CCCCCC-CccccCccCCCCceEEecCCCCCC
Q 018097 184 GRLMKVLSINLGISEDRLQNAFGGDNIGACLR--VNFYP------K---CPQPDL-TLGLSSHSDPGGLTLLLPDHQVTG 251 (361)
Q Consensus 184 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr--~~~Yp------~---~~~~~~-~~g~~~HtD~g~lTlL~~q~~~~G 251 (361)
..|+++|+++||+++++|.+.+.. ..+.+| +|||| | |++++. .+|+++|||+|+||||+ ||+++|
T Consensus 154 ~~ll~~la~~Lgl~~~~f~~~~~~--~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~-qd~v~G 230 (331)
T 1odm_A 154 SALLKGYALALGKEENFFARHFKP--DDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLY-QSNVQN 230 (331)
T ss_dssp HHHHHHHHHHTTSCTTTTGGGCCT--TTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEE-ECSSCC
T ss_pred HHHHHHHHHHhCCCHHHHHHHhcC--cHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEe-eCCCCC
Confidence 999999999999999999998865 336899 99999 8 888886 89999999999999999 899999
Q ss_pred ceee-cCCeEEEecCCCCeEEEEeCchhhhhhcCccccccceeccCCCCCeeEEEEeecCCCCcceecCccccCCCCCCC
Q 018097 252 LQVR-KGDNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFYNPKSDIPIEPVKELVTEESPSL 330 (361)
Q Consensus 252 LqV~-~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~ 330 (361)
|||+ ++| |++|+|+||++||||||+||+||||+|||+.|||+. +.++|||++||++|+.|++|.|+++++++++ ++
T Consensus 231 LQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~ 307 (331)
T 1odm_A 231 LQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SD 307 (331)
T ss_dssp EEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CS
T ss_pred EEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cC
Confidence 9999 888 999999999999999999999999999999999985 5778999999999999999999999999888 99
Q ss_pred CCCccHHHHHHHHHhcC
Q 018097 331 YPPMTFDEYRLFIRTRG 347 (361)
Q Consensus 331 y~~~~~~ey~~~~~~~~ 347 (361)
|+++|++||+..+++..
T Consensus 308 y~~~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 308 REPLSYGDYLQNGLVSL 324 (331)
T ss_dssp SCCCBHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHH
Confidence 99999999999887654
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=6.7e-73 Score=536.11 Aligned_cols=277 Identities=19% Similarity=0.275 Sum_probs=235.4
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhcCCC-HHHHhhhcCCC-CCccc
Q 018097 50 INIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSP-MEVKQAYGNSP-KTYEG 127 (361)
Q Consensus 50 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF~lP-~eeK~~~~~~~-~~~~G 127 (361)
.+||||||+.+.+++. .++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++.... ..++|
T Consensus 3 ~~iPvIDls~l~~~~~------~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~G 76 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH------QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRG 76 (311)
T ss_dssp CCCCEEEHHHHHTTCS------HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSE
T ss_pred CCCcEEEchhhcCCCH------HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCc
Confidence 4699999998765542 1399999999999999999999999999999999999999 99999998664 34899
Q ss_pred ccCCCCc------cCCcccCccccccccccCCCccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhcCC----C
Q 018097 128 YGSRLGV------EKGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGI----S 197 (361)
Q Consensus 128 y~~~~~~------~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl----~ 197 (361)
|+..... ...+..||+|+|.+... +|.|| +++|++.+++|+++|.+|+..|+++|+++||+ +
T Consensus 77 y~~~~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~ 148 (311)
T 1dcs_A 77 FTGLESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGG 148 (311)
T ss_dssp EEEC-----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTC
T ss_pred eeeccccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCc
Confidence 9765432 22457899999976533 47899 88999999999999999999999999999999 8
Q ss_pred HHHHHHhhCCCCCceeEEeecCCCCCCCC--C--CccccCccCCCCceEEecCC-CCCC---ceeecCCeEEEecCCCCe
Q 018097 198 EDRLQNAFGGDNIGACLRVNFYPKCPQPD--L--TLGLSSHSDPGGLTLLLPDH-QVTG---LQVRKGDNWITVKPAKHA 269 (361)
Q Consensus 198 ~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~--~--~~g~~~HtD~g~lTlL~~q~-~~~G---LqV~~~g~W~~V~p~pg~ 269 (361)
+++|.+. .+.+|+||||||++++ . .+|+++|||+|+||||+ || +++| |||+.+|+|++|+|+||+
T Consensus 149 ~~~f~~~------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~-qd~~v~G~~~LqV~~~g~W~~V~p~pg~ 221 (311)
T 1dcs_A 149 VEAFLDC------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQ-QTPCANGFVSLQAEVGGAFTDLPYRPDA 221 (311)
T ss_dssp HHHHHSC------CCEEEEEEECC-----------CCEEEEEECSSEEEEE-EECCTTCCCCEEEEETTEEEECCCCTTC
T ss_pred HhHHhhc------chhhheecCCCCCcccccCccccccccccCCCeEEEEe-cCCCCCCceeEEEEeCCEEEeCcCCCCe
Confidence 8888764 2689999999999874 3 68899999999999999 87 8999 999999999999999999
Q ss_pred EEEEeCchhhhhhcCccccccceeccCC-----CCCeeEEEEeecCCCCcceecCccccCCCCCCCC--CCccHHHHHHH
Q 018097 270 FIVNIGDQIQVLSNANYKSVEHRVAVNS-----ANERVSLAFFYNPKSDIPIEPVKELVTEESPSLY--PPMTFDEYRLF 342 (361)
Q Consensus 270 lvVnvGd~L~~~TnG~~~s~~HRV~~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y--~~~~~~ey~~~ 342 (361)
+||||||+||+||||+|||+.|||++++ .++|||++||++|+.|++|. +++++++++|++| +++|++||+..
T Consensus 222 lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~ 300 (311)
T 1dcs_A 222 VLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGG 300 (311)
T ss_dssp EEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCS
T ss_pred EEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHH
Confidence 9999999999999999999999999987 67899999999999999999 9999999999999 99999999887
Q ss_pred HHhcCC
Q 018097 343 IRTRGP 348 (361)
Q Consensus 343 ~~~~~~ 348 (361)
+++..+
T Consensus 301 ~~~~~~ 306 (311)
T 1dcs_A 301 NYVNIR 306 (311)
T ss_dssp SCCCEE
T ss_pred HHHHHh
Confidence 665544
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=3.7e-67 Score=489.60 Aligned_cols=260 Identities=24% Similarity=0.386 Sum_probs=223.4
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhcCCCHHHHhhhcCCCCCcccccC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHSPMEVKQAYGNSPKTYEGYGS 130 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~Gy~~ 130 (361)
+||||||+.. +++++|.+||++||||||+||||+.++++++++.+++||+| |+|+++...+..++||..
T Consensus 3 ~IPvIDls~~---------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~ 71 (280)
T 3on7_A 3 KLETIDYRAA---------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFP 71 (280)
T ss_dssp -CCEEETTST---------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEEC
T ss_pred CCCEEECCCh---------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCcccc
Confidence 6999999963 25789999999999999999999999999999999999998 799999876666899976
Q ss_pred CC-Ccc--CCcccCccccccccccCCCccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCH--HH---HH
Q 018097 131 RL-GVE--KGAILDWSDYYFLHYRPCSLKDFNKWPATPASCREVIDEYCKELVRLSGRLMKVLSINLGISE--DR---LQ 202 (361)
Q Consensus 131 ~~-~~~--~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---~~ 202 (361)
.. ... .....||+|+|.+. .||..|++||+.+++|+++|.+|+.+||++|+++||++. ++ |.
T Consensus 72 ~~~~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~ 141 (280)
T 3on7_A 72 ASISETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLP 141 (280)
T ss_dssp CC--------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHH
T ss_pred CccccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHH
Confidence 43 111 22357899988541 378888999999999999999999999999999999863 22 55
Q ss_pred HhhCCCCCceeEEeecCCCCCCCC--CCccccCccCCCCceEEecCCCCCCceee-cCCeEEEecCCCCeEEEEeCchhh
Q 018097 203 NAFGGDNIGACLRVNFYPKCPQPD--LTLGLSSHSDPGGLTLLLPDHQVTGLQVR-KGDNWITVKPAKHAFIVNIGDQIQ 279 (361)
Q Consensus 203 ~~~~~~~~~~~lr~~~Yp~~~~~~--~~~g~~~HtD~g~lTlL~~q~~~~GLqV~-~~g~W~~V~p~pg~lvVnvGd~L~ 279 (361)
+.+.... .+.+|++|||||+.++ ..+|+++|||+|+||||+ ||+++||||+ ++|+|++|+|+||++|||+||+||
T Consensus 142 ~~~~~~~-~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~-qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~ 219 (280)
T 3on7_A 142 EMIANSH-KTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLP-TANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQ 219 (280)
T ss_dssp HHHTTCS-SCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEE-CCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHH
T ss_pred HHhcCCc-cceEEEEECCCCCCccccCcccccCCCCCCeEEEEE-ecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHH
Confidence 5554422 2689999999999765 479999999999999999 9999999998 789999999999999999999999
Q ss_pred hhhcCccccccceeccCC----CCCeeEEEEeecCCCCcceecCccccCCCCCCCCCCccHHHHHHHHHhcC
Q 018097 280 VLSNANYKSVEHRVAVNS----ANERVSLAFFYNPKSDIPIEPVKELVTEESPSLYPPMTFDEYRLFIRTRG 347 (361)
Q Consensus 280 ~~TnG~~~s~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~ 347 (361)
+||||+|||+.|||+.++ .++|||++||++|+.|++|.| ++|++||+..+++..
T Consensus 220 ~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 220 EASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp HHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred HHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 999999999999998873 458999999999999999985 589999999987653
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=94.02 E-value=0.15 Score=45.50 Aligned_cols=80 Identities=18% Similarity=0.130 Sum_probs=52.4
Q ss_pred eEEeecCCCCCCCCCCccccCccCCC-----------CceEEec-CC----CCCCceeecCCeEEEecCCCCeEEEEeCc
Q 018097 213 CLRVNFYPKCPQPDLTLGLSSHSDPG-----------GLTLLLP-DH----QVTGLQVRKGDNWITVKPAKHAFIVNIGD 276 (361)
Q Consensus 213 ~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~~-q~----~~~GLqV~~~g~W~~V~p~pg~lvVnvGd 276 (361)
-+++++|.+- --..+|.|.. .+|+++- .+ ..|.|.+.....=..|+|..|.+|+.-.
T Consensus 100 ~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s- 172 (243)
T 3dkq_A 100 PPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS- 172 (243)
T ss_dssp EEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET-
T ss_pred cceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC-
Confidence 4888999652 1145676653 3555541 23 1233555544334789999999999743
Q ss_pred hhhhhhcCccccccceeccCCCCCeeEEEEeecC
Q 018097 277 QIQVLSNANYKSVEHRVAVNSANERVSLAFFYNP 310 (361)
Q Consensus 277 ~L~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~P 310 (361)
.++|+|.....+.|++++.+++-
T Consensus 173 -----------~~lH~v~pV~~G~R~~~~~Wi~s 195 (243)
T 3dkq_A 173 -----------SSLHQVTPVLSGERTAAFMWLQS 195 (243)
T ss_dssp -----------TSEEEECCEEEECEEEEEEEEEE
T ss_pred -----------CCeEcCccccccCEEEEEEehhh
Confidence 36899986666789999998873
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=91.90 E-value=2.2 Score=37.11 Aligned_cols=43 Identities=21% Similarity=0.324 Sum_probs=33.9
Q ss_pred CeEEEecCCCCeEEEEeCchhhhhhcCccccccceeccCC-CCCeeEEEEeecCCC
Q 018097 258 DNWITVKPAKHAFIVNIGDQIQVLSNANYKSVEHRVAVNS-ANERVSLAFFYNPKS 312 (361)
Q Consensus 258 g~W~~V~p~pg~lvVnvGd~L~~~TnG~~~s~~HRV~~~~-~~~R~Si~~F~~P~~ 312 (361)
..+..|.|.+|.+||.-+. ..|.|..+. +++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4667899999999998765 379998765 468999999988754
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=88.24 E-value=1.3 Score=39.42 Aligned_cols=79 Identities=18% Similarity=0.250 Sum_probs=53.4
Q ss_pred EEeecCCCCCCCCCCccccCccCCC-----CceEEecC-CC-------CCCceeecCC--eEEEecCCCCeEEEEeCchh
Q 018097 214 LRVNFYPKCPQPDLTLGLSSHSDPG-----GLTLLLPD-HQ-------VTGLQVRKGD--NWITVKPAKHAFIVNIGDQI 278 (361)
Q Consensus 214 lr~~~Yp~~~~~~~~~g~~~HtD~g-----~lTlL~~q-~~-------~~GLqV~~~g--~W~~V~p~pg~lvVnvGd~L 278 (361)
+.+.+|++. .-...+|.|.. .+|+++ . ++ .|-|.+..++ ....|.|..|.+|++-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vl-YLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIY-YLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEE-ECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEE-EeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 667888751 12346677763 567765 3 21 3346777544 6789999999999987541
Q ss_pred hhhhcCccccccceeccCCCCCeeEEEEeec
Q 018097 279 QVLSNANYKSVEHRVAVNSANERVSLAFFYN 309 (361)
Q Consensus 279 ~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~~ 309 (361)
-.+|.|.. ..+.|+||+..++
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899975 5578999998664
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=83.78 E-value=1.9 Score=37.55 Aligned_cols=47 Identities=13% Similarity=0.119 Sum_probs=34.3
Q ss_pred EEEecCCCCeEEEEeCchhhhhhcCcc-ccccceeccCCCCCeeEEEEeecC
Q 018097 260 WITVKPAKHAFIVNIGDQIQVLSNANY-KSVEHRVAVNSANERVSLAFFYNP 310 (361)
Q Consensus 260 W~~V~p~pg~lvVnvGd~L~~~TnG~~-~s~~HRV~~~~~~~R~Si~~F~~P 310 (361)
-+.|.|..|.+||.-- ...+|.. ..++|+|.....+.|+++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4899999999988753 1123332 568999986656789999988864
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=81.38 E-value=3.4 Score=35.92 Aligned_cols=104 Identities=16% Similarity=0.090 Sum_probs=60.4
Q ss_pred HHHHHhHHhcCCCHHHHHHhhCCCCCceeEEeecCCCCCCCCCCccccCccCCC-----------CceEEec-CC-CCCC
Q 018097 185 RLMKVLSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPG-----------GLTLLLP-DH-QVTG 251 (361)
Q Consensus 185 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g-----------~lTlL~~-q~-~~~G 251 (361)
.|.+.|+..+|++.+. . + .+++.+|.+-. ...+|.|.. .+|+++- .| ..||
T Consensus 94 ~i~~Ri~~~~gl~~~~-----~-E----~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GG 157 (216)
T 3itq_A 94 KIEKRISSIMNVPASH-----G-E----GLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGG 157 (216)
T ss_dssp HHHHHHHHHHTSCGGG-----B-C----CCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEEC
T ss_pred HHHHHHHHhcCceecc-----c-c----ceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCc
Confidence 4444455556775321 1 1 37788886421 135677753 3666651 12 2344
Q ss_pred ceeecCCeEEEecCCCCeEEEEeCchhhhhhcCc-cccccceeccCCCCCeeEEEEeec
Q 018097 252 LQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNAN-YKSVEHRVAVNSANERVSLAFFYN 309 (361)
Q Consensus 252 LqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~-~~s~~HRV~~~~~~~R~Si~~F~~ 309 (361)
=-+..+.. +.|.|..|.+|+.-.-. .+|. -..++|+|.....+.|+++..+++
T Consensus 158 eT~Fp~~~-~~V~P~~G~al~f~~~~----~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 158 ETFFPKLN-LSVHPRKGMAVYFEYFY----QDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp CEEETTTT-EEECCCTTCEEEEECCC----SSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred eeEecCCC-CEEecCCCeEEEEeccC----CCCCCCCccccccceeccccEEEEEeeEe
Confidence 33443322 78999999988876411 1222 145799998666678999988875
No 12
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=78.89 E-value=5.2 Score=34.36 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=48.5
Q ss_pred EEeecCCCCCCCCCCccccCccCCC-------Cc-eEEecCCCCCCceeec----------CCeEEEecCCCCeEEEEeC
Q 018097 214 LRVNFYPKCPQPDLTLGLSSHSDPG-------GL-TLLLPDHQVTGLQVRK----------GDNWITVKPAKHAFIVNIG 275 (361)
Q Consensus 214 lr~~~Yp~~~~~~~~~g~~~HtD~g-------~l-TlL~~q~~~~GLqV~~----------~g~W~~V~p~pg~lvVnvG 275 (361)
.-+|+|.+- .-++++|.|-. .| +|-+ ....=+.+.. .+..+.+.-.+|.++|.-|
T Consensus 102 ~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSL--G~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g 174 (204)
T 3s57_A 102 VLINRYKDG-----SDHICEHRDDERELAPGSPIASVSF--GASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNH 174 (204)
T ss_dssp EEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEE--ESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEET
T ss_pred eEEEEECCC-----CCcccceecChhhccCCCcEEEEEC--CCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECc
Confidence 458999752 23688898862 11 2222 1111233331 1257888889999999999
Q ss_pred chhhhhhcCccccccceeccCC--CCCeeEEEEe
Q 018097 276 DQIQVLSNANYKSVEHRVAVNS--ANERVSLAFF 307 (361)
Q Consensus 276 d~L~~~TnG~~~s~~HRV~~~~--~~~R~Si~~F 307 (361)
++=..|. |.|.... ...|+|+.|-
T Consensus 175 ~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 175 PTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp THHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhhheeE--------eeccccCCCCCCEEEEEee
Confidence 9777675 5554322 3579999873
No 13
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=72.92 E-value=4.5 Score=37.79 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=63.1
Q ss_pred eEEeecCCCCCCCCCCccccCccCCC------CceEEecCCCCCCceee-cCCeEEEecCCCCeEEEEeCchhhhhhcCc
Q 018097 213 CLRVNFYPKCPQPDLTLGLSSHSDPG------GLTLLLPDHQVTGLQVR-KGDNWITVKPAKHAFIVNIGDQIQVLSNAN 285 (361)
Q Consensus 213 ~lr~~~Yp~~~~~~~~~g~~~HtD~g------~lTlL~~q~~~~GLqV~-~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~ 285 (361)
..-+|+|.+ + -++++|.|-. ..||=+ ....=+.+. ++|.++.+.-.+|+++|.-|+.-..|.-|.
T Consensus 199 ~~lvN~Y~~-----G-~~I~~H~D~~~~~~~~I~slSL--G~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I 270 (345)
T 3tht_A 199 QMTINQYEP-----G-QGIPAHIDTHSAFEDEIVSLSL--GSEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGI 270 (345)
T ss_dssp EEEEEEECT-----T-CCEEEECCCTTTBCSCEEEEEE--SSCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEE
T ss_pred EEEEEEecC-----C-CCEeeccCCchhcCCeEEEEEC--CCceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccC
Confidence 456899965 2 2789999984 222222 122223443 357799999999999999999988887765
Q ss_pred cccccceec------------------cCCCCCeeEEEEeecCCCCcceecCccccCC
Q 018097 286 YKSVEHRVA------------------VNSANERVSLAFFYNPKSDIPIEPVKELVTE 325 (361)
Q Consensus 286 ~~s~~HRV~------------------~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~ 325 (361)
-+-...-+- ..+...|+|+.|=.-+...+.- ..|++.+.
T Consensus 271 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C-~~~~~cd~ 327 (345)
T 3tht_A 271 TCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNC-SYPLVCDS 327 (345)
T ss_dssp CCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCC-SCTTTCTT
T ss_pred CcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCC-CCCCcccC
Confidence 544332221 0123469999987655443221 23444544
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=70.99 E-value=7.1 Score=34.31 Aligned_cols=83 Identities=19% Similarity=0.191 Sum_probs=50.5
Q ss_pred eEEeecCCCCCCCCCCccccCccCCC--------CceEEecCCCCCCceeec-C----------CeEEEecCCCCeEEEE
Q 018097 213 CLRVNFYPKCPQPDLTLGLSSHSDPG--------GLTLLLPDHQVTGLQVRK-G----------DNWITVKPAKHAFIVN 273 (361)
Q Consensus 213 ~lr~~~Yp~~~~~~~~~g~~~HtD~g--------~lTlL~~q~~~~GLqV~~-~----------g~W~~V~p~pg~lvVn 273 (361)
.+-+|+|.+- .-++++|.|-. ..||-+ ....=+.+.. . +..+.+.-.+|.++|+
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSL--G~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM 199 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSF--GATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIM 199 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEE--ESCEEEEEEECCC--------CCCEEEEEECTTCEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEEC--CCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEE
Confidence 3568999752 23688898852 222222 1111233321 1 4688999999999999
Q ss_pred eCchhhhhhcCccccccceeccCCCCCeeEEEEee
Q 018097 274 IGDQIQVLSNANYKSVEHRVAVNSANERVSLAFFY 308 (361)
Q Consensus 274 vGd~L~~~TnG~~~s~~HRV~~~~~~~R~Si~~F~ 308 (361)
-|++=..|.-|.-+.. .....|+|+.|=.
T Consensus 200 ~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 200 EGATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp EETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred ChhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 9998666664433211 1245799999755
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=70.38 E-value=6.9 Score=33.80 Aligned_cols=79 Identities=20% Similarity=0.158 Sum_probs=48.9
Q ss_pred eEEeecCCCCCCCCCCccccCccCC-----C--CceEEecCCCCCCceeec---CCeEEEecCCCCeEEEEeCchhhhhh
Q 018097 213 CLRVNFYPKCPQPDLTLGLSSHSDP-----G--GLTLLLPDHQVTGLQVRK---GDNWITVKPAKHAFIVNIGDQIQVLS 282 (361)
Q Consensus 213 ~lr~~~Yp~~~~~~~~~g~~~HtD~-----g--~lTlL~~q~~~~GLqV~~---~g~W~~V~p~pg~lvVnvGd~L~~~T 282 (361)
..-+|+|.+ +. ++++|.|- + .+||-+ ....=+.+.. .+..+.+.-.+|+++|.-|+. +.|
T Consensus 106 ~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSL--G~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~- 175 (211)
T 3i3q_A 106 ACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSL--GLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLF- 175 (211)
T ss_dssp EEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEE--ESCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTC-
T ss_pred EEEEEEEcC-----CC-CcccccCCCccccCCCEEEEEC--CCCeEEEEecccCCCceEEEECCCCCEEEECchH-Hce-
Confidence 355899965 33 78999993 2 122222 1112233332 357888999999999998886 222
Q ss_pred cCccccccceeccCCC-------CCeeEEEEee
Q 018097 283 NANYKSVEHRVAVNSA-------NERVSLAFFY 308 (361)
Q Consensus 283 nG~~~s~~HRV~~~~~-------~~R~Si~~F~ 308 (361)
.|.|..... ..|+|+.|-.
T Consensus 176 -------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 477654332 3599999754
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=57.03 E-value=4.8 Score=38.88 Aligned_cols=53 Identities=11% Similarity=0.228 Sum_probs=39.4
Q ss_pred CCCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhc
Q 018097 49 KINIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFF 108 (361)
Q Consensus 49 ~~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF 108 (361)
..-||.||++++.++. +.++..+.+++.|++.|.|. ||.+...+..+...+|.
T Consensus 98 ~~~iP~i~f~di~~~~------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl 150 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGH------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYL 150 (461)
T ss_dssp CCSSCEEEHHHHHHTC------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCC------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHH
Confidence 3469999999875432 23455678899999988876 89888777777776664
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=48.56 E-value=7 Score=36.98 Aligned_cols=52 Identities=6% Similarity=0.028 Sum_probs=39.2
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhcCC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFFHS 110 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF~l 110 (361)
++|.||++.+..+ .+.+.++.+|+.++|+..+.+-.++.+. ..+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~-----d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY-----DEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC-----HHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHHhcC-----HHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 6899999876543 2578899999999999999998887543 34556666443
No 18
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=42.71 E-value=26 Score=20.19 Aligned_cols=17 Identities=29% Similarity=0.690 Sum_probs=15.8
Q ss_pred HHHHHHHHHHhhcceEE
Q 018097 70 EILGQISAACREWGFFQ 86 (361)
Q Consensus 70 ~~~~~l~~A~~~~GfF~ 86 (361)
.+++.|.-.|.+-|||+
T Consensus 10 ~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 10 HLVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHhccCcccc
Confidence 68899999999999998
No 19
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=41.81 E-value=32 Score=29.22 Aligned_cols=68 Identities=18% Similarity=0.324 Sum_probs=46.7
Q ss_pred ccccCccCCC--CceEEecCCCCCCceeecCCeEEEecCCCCeEEEEeCchhhhhhcCcc----ccccceeccCCCCCee
Q 018097 229 LGLSSHSDPG--GLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGDQIQVLSNANY----KSVEHRVAVNSANERV 302 (361)
Q Consensus 229 ~g~~~HtD~g--~lTlL~~q~~~~GLqV~~~g~W~~V~p~pg~lvVnvGd~L~~~TnG~~----~s~~HRV~~~~~~~R~ 302 (361)
..+.+|+|+. .|++.+ ||++ |+ +...+.||+.-..|..|+. -|-.|.|.+.++.+|+
T Consensus 113 ~~I~pH~g~~n~~lR~HL------~L~~---------p~--~~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rv 175 (197)
T 3rcq_A 113 THVWPHTGPTNCRLRMHL------GLVI---------PK--EGCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRL 175 (197)
T ss_dssp EEEEEECCSCTTEEEEEE------EEEC---------CS--SSEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEE
T ss_pred CCcCCeeCCCCCeEEEEE------EEEe---------CC--CCcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEE
Confidence 4468888875 556655 4443 22 2334567888888888865 3668999998888999
Q ss_pred EEEE-eecCCCC
Q 018097 303 SLAF-FYNPKSD 313 (361)
Q Consensus 303 Si~~-F~~P~~d 313 (361)
-+.+ |.+|+..
T Consensus 176 vL~~D~~rPdl~ 187 (197)
T 3rcq_A 176 IFIVDVWHPELT 187 (197)
T ss_dssp EEEEEEECTTSC
T ss_pred EEEEeeeCCCCC
Confidence 8776 5677653
No 20
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=40.36 E-value=21 Score=32.32 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=38.1
Q ss_pred cccCccCC--------CCceEEecCCCCCCceeecCCeEEEecCCCCeE-EEEeCchhhhhhcCccccccceeccCCCCC
Q 018097 230 GLSSHSDP--------GGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAF-IVNIGDQIQVLSNANYKSVEHRVAVNSANE 300 (361)
Q Consensus 230 g~~~HtD~--------g~lTlL~~q~~~~GLqV~~~g~W~~V~p~pg~l-vVnvGd~L~~~TnG~~~s~~HRV~~~~~~~ 300 (361)
.+.+|.|+ +.+-+..+-...+|.....+|+-+..++ |.. .+| -+..|.|.+.++.+
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d-------------~~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLD-------------AATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECC-------------TTSCEEEEESSSSC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEc-------------CCCeeEEEcCCCCC
Confidence 46889998 3344444223345555555554333322 332 221 23479999999999
Q ss_pred eeEEEEee
Q 018097 301 RVSLAFFY 308 (361)
Q Consensus 301 R~Si~~F~ 308 (361)
|+.+.+=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99998755
No 21
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=39.06 E-value=15 Score=31.36 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=28.4
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGV 92 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 92 (361)
.||++++.... + .++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g--~----~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG--S----PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT--C----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC--c----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999987542 2 357788889998888888899996
No 22
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=36.72 E-value=52 Score=30.15 Aligned_cols=47 Identities=15% Similarity=0.072 Sum_probs=33.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCC----HHHHHHHHHHHHHhcC
Q 018097 60 LDGGDENARREILGQISAACREWGFFQVVNHGVR----HELMDDARENWRQFFH 109 (361)
Q Consensus 60 l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~----~~l~~~~~~~~~~fF~ 109 (361)
|..++++ ++.+++.+.++.-||..=.+|||+ .+-+..+.+++++|++
T Consensus 298 l~~g~~e---~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 298 LLPGPVD---KIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CTTCCHH---HHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred hcCCCHH---HHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4455543 445556666777788766789975 6889999999999985
No 23
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=33.58 E-value=21 Score=30.52 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=28.1
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGV 92 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 92 (361)
.||++++.... + .++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g--~----~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG--T----RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT--C----HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC--c----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 68999986542 2 357788889998888888899996
No 24
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=33.09 E-value=27 Score=29.59 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=27.5
Q ss_pred CcceE-eCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCC
Q 018097 51 NIPII-NLAGLDGGDENARREILGQISAACREWGFFQVVNHGV 92 (361)
Q Consensus 51 ~iPvI-Dl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 92 (361)
.||++ ++.... + .++++.+.+++.+.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~g--~----~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVSA--T----EEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCSS--S----HHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCCC--c----HHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 776432 2 357778888888888888999996
No 25
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=31.03 E-value=37 Score=30.08 Aligned_cols=50 Identities=12% Similarity=0.044 Sum_probs=36.6
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhc
Q 018097 50 INIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHELMDDARENWRQFF 108 (361)
Q Consensus 50 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF 108 (361)
.+|+-||++...+ .+..++|.+++.++|+..+.+-.++.+. ..+.++.|-
T Consensus 16 aei~gvdl~~~l~------~~~~~~l~~~l~~~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLS------DNQFEQLYHAVLRHQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCC------HHHHHHHHHHHHHHSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred EEEECCCcCccCC------HHHHHHHHHHHHHCCEEEECCCCCCHHH---HHHHHHHhC
Confidence 4678889988542 2457899999999999999988876643 344555553
No 26
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=29.71 E-value=30 Score=30.06 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=28.2
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGV 92 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 92 (361)
.||++++... ++ .++++++.+++++.-.+.+.|||+
T Consensus 161 ~v~~~~y~~~--g~----~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP--GS----VELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCST--TC----HHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCC--Cc----HHHHHHHHHHhccCCEEEEcCCCc
Confidence 5999998654 23 357778888888888888999996
No 27
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=28.84 E-value=39 Score=21.94 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=17.4
Q ss_pred ceEeCCCCCCCCHHHHHHHHHHHHHHHhhc
Q 018097 53 PIINLAGLDGGDENARREILGQISAACREW 82 (361)
Q Consensus 53 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~~ 82 (361)
|+|.+.-+...+++.+++++++|.+++.+.
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~ 30 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANS 30 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 455554333335566667777777776653
No 28
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=28.22 E-value=43 Score=21.63 Aligned_cols=23 Identities=13% Similarity=0.239 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhHHhcCCCHHH
Q 018097 178 ELVRLSGRLMKVLSINLGISEDR 200 (361)
Q Consensus 178 ~~~~la~~ll~~l~~~Lgl~~~~ 200 (361)
.-.+|+..|.+++++.||.|+++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34578899999999999998763
No 29
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=27.63 E-value=27 Score=31.29 Aligned_cols=37 Identities=16% Similarity=0.211 Sum_probs=28.7
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGV 92 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 92 (361)
.||++|+..... + .++++.+.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~-~----~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIAL-D----LSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSC-C----HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCC-C----HHHHHHHHHHhCcCCEEEEcCCce
Confidence 599999876532 2 346778888888888999999996
No 30
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=27.59 E-value=43 Score=21.70 Aligned_cols=30 Identities=20% Similarity=0.529 Sum_probs=17.9
Q ss_pred ceEeCCCCCCCCHHHHHHHHHHHHHHHhhc
Q 018097 53 PIINLAGLDGGDENARREILGQISAACREW 82 (361)
Q Consensus 53 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~~ 82 (361)
|.|.+.-+...+++.+++++++|.+++.+.
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~ 30 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKET 30 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 455554333335666677777777777653
No 31
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=25.84 E-value=70 Score=21.03 Aligned_cols=28 Identities=21% Similarity=0.442 Sum_probs=18.4
Q ss_pred ceEeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 018097 53 PIINLAGLDGGDENARREILGQISAACRE 81 (361)
Q Consensus 53 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 81 (361)
|+|.+.- ...+.+.+++++++|.+++.+
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~ 28 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAE 28 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHH
Confidence 5555554 344566777788887777765
No 32
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=25.82 E-value=32 Score=30.68 Aligned_cols=36 Identities=17% Similarity=0.152 Sum_probs=28.2
Q ss_pred CcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCC
Q 018097 51 NIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHGV 92 (361)
Q Consensus 51 ~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi 92 (361)
.||++++... ++ .++++++.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~--g~----~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVP--GT----DAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCS--SS----HHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCC--CC----HHHHHHHHHHHccCCEEEEcCCCc
Confidence 5899988643 33 357888889998888899999996
No 33
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.36 E-value=56 Score=22.86 Aligned_cols=40 Identities=15% Similarity=0.264 Sum_probs=34.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhHHhcCCCHHHHHHhhC
Q 018097 167 SCREVIDEYCKELVRLSGRLMKVLSINLGISEDRLQNAFG 206 (361)
Q Consensus 167 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~ 206 (361)
+-+..++.|+..-.+-...-+..||+.+||+.+.....|.
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 5678889999888888888899999999999998877774
No 34
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=25.28 E-value=34 Score=19.00 Aligned_cols=13 Identities=31% Similarity=0.567 Sum_probs=10.1
Q ss_pred ceeecCCeEEEec
Q 018097 252 LQVRKGDNWITVK 264 (361)
Q Consensus 252 LqV~~~g~W~~V~ 264 (361)
..|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 4577999999764
No 35
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=24.84 E-value=63 Score=28.86 Aligned_cols=51 Identities=10% Similarity=-0.042 Sum_probs=37.4
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCC-CCHHHHHHHHHHHHHhcC
Q 018097 50 INIPIINLAGLDGGDENARREILGQISAACREWGFFQVVNHG-VRHELMDDARENWRQFFH 109 (361)
Q Consensus 50 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhG-i~~~l~~~~~~~~~~fF~ 109 (361)
.+|+-||++...+ .+..++|.+++.++|+..+.+-. ++. ++..+.++.|-.
T Consensus 26 aei~gvdl~~~l~------~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLD------AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCC------HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCC------HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4577789987542 24578999999999999999887 775 345556666644
No 36
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=23.17 E-value=64 Score=21.04 Aligned_cols=23 Identities=26% Similarity=0.224 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhHHhcCCCHHHH
Q 018097 179 LVRLSGRLMKVLSINLGISEDRL 201 (361)
Q Consensus 179 ~~~la~~ll~~l~~~Lgl~~~~~ 201 (361)
-.+++..|.+++++.||.+++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 35788899999999999987643
No 37
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=22.83 E-value=38 Score=28.63 Aligned_cols=36 Identities=19% Similarity=0.257 Sum_probs=26.8
Q ss_pred CCcceEeCCCCCCCCHHHHHHHHHHHHHHHhhcc---eEEEEeCCC
Q 018097 50 INIPIINLAGLDGGDENARREILGQISAACREWG---FFQVVNHGV 92 (361)
Q Consensus 50 ~~iPvIDl~~l~~~d~~~r~~~~~~l~~A~~~~G---fF~l~nhGi 92 (361)
..||+++.. .+ ..++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~---~g----~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE---QN----IPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC---SC----HHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC---CC----HHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 368998874 22 2467888889998875 788889996
No 38
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=22.16 E-value=1.5e+02 Score=25.84 Aligned_cols=35 Identities=9% Similarity=0.065 Sum_probs=29.0
Q ss_pred HHHHHHhhcceEEEEeCCCCHHHHHHHHHHHHHhcC
Q 018097 74 QISAACREWGFFQVVNHGVRHELMDDARENWRQFFH 109 (361)
Q Consensus 74 ~l~~A~~~~GfF~l~nhGi~~~l~~~~~~~~~~fF~ 109 (361)
+..+.+.+.||+.|.|- ++.+.++++.+...++++
T Consensus 7 e~~~~f~~dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 41 (291)
T 2opw_A 7 SQLQKFQQDGFLVLEGF-LSAEECVAMQQRIGEIVA 41 (291)
T ss_dssp HHHHHHHHHSEEEETTS-SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCC-CCHHHHHHHHHHHHHHHh
Confidence 55678999999998864 799999999988888764
No 39
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=22.10 E-value=1.5e+02 Score=25.27 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHhhcceEEEEe-CCCCHHHHHHHHHHHHH
Q 018097 66 NARREILGQISAACREWGFFQVVN-HGVRHELMDDARENWRQ 106 (361)
Q Consensus 66 ~~r~~~~~~l~~A~~~~GfF~l~n-hGi~~~l~~~~~~~~~~ 106 (361)
+.+.+.+++|.+.+.++..++|++ +|++...++++....++
T Consensus 3 e~K~~~v~el~e~l~~~~~v~v~~~~gl~~~ql~~lR~~lr~ 44 (213)
T 3jsy_A 3 PWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD 44 (213)
T ss_dssp HHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHHHhC
Confidence 456678899999999998888775 68988888777766653
No 40
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=21.40 E-value=65 Score=21.34 Aligned_cols=29 Identities=24% Similarity=0.395 Sum_probs=18.0
Q ss_pred ceEeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 018097 53 PIINLAGLDGGDENARREILGQISAACRE 81 (361)
Q Consensus 53 PvIDl~~l~~~d~~~r~~~~~~l~~A~~~ 81 (361)
|+|.+.-+...+++.++++++.|.+++.+
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~ 29 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHE 29 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 44444433334566777777877777776
No 41
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=20.72 E-value=82 Score=21.68 Aligned_cols=45 Identities=13% Similarity=0.224 Sum_probs=28.2
Q ss_pred ceEeCCCCCCC-CHHHHHHHHHHHHHHHhhc-c----eEEEEeCCCCHHHH
Q 018097 53 PIINLAGLDGG-DENARREILGQISAACREW-G----FFQVVNHGVRHELM 97 (361)
Q Consensus 53 PvIDl~~l~~~-d~~~r~~~~~~l~~A~~~~-G----fF~l~nhGi~~~l~ 97 (361)
|+|.+.-+... +++.+++++++|.+++.+. | -++++-+.++.+.+
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lgip~~~v~V~i~e~~~~~w 51 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESW 51 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEECCGGGH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHhCcCCceEEEEEEEeChHHE
Confidence 56666544444 6778888999999988874 3 34444444554443
No 42
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=20.35 E-value=99 Score=23.75 Aligned_cols=36 Identities=17% Similarity=0.271 Sum_probs=26.2
Q ss_pred eEeCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEeCCCCHH
Q 018097 54 IINLAGLDGGDENARREILGQISAACREWGFFQVVNHGVRHE 95 (361)
Q Consensus 54 vIDl~~l~~~d~~~r~~~~~~l~~A~~~~GfF~l~nhGi~~~ 95 (361)
|||++.+... ....+|.+.|+++|+.-+---|.+.+
T Consensus 51 VlDl~~l~~~------~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESP------VNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSS------CCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCCh------HHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 5799887522 12678899999999999866665544
No 43
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=20.00 E-value=1.2e+02 Score=30.34 Aligned_cols=83 Identities=20% Similarity=0.230 Sum_probs=48.5
Q ss_pred EEeecCCCCCCCCCCccccCccCC-C--CceEEec-CC--------CCCCceeecC--------CeEEEecCCCCeEEEE
Q 018097 214 LRVNFYPKCPQPDLTLGLSSHSDP-G--GLTLLLP-DH--------QVTGLQVRKG--------DNWITVKPAKHAFIVN 273 (361)
Q Consensus 214 lr~~~Yp~~~~~~~~~g~~~HtD~-g--~lTlL~~-q~--------~~~GLqV~~~--------g~W~~V~p~pg~lvVn 273 (361)
+.++.|++- -....|.|. + -||+++- .+ ..|-|+++.. .....|.|..|.+||+
T Consensus 126 ~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 556777542 235678884 2 2444430 11 2344777732 2467899999999998
Q ss_pred eCchhhhhhcCccccccceeccC-CCCCeeEEEEee-cCC
Q 018097 274 IGDQIQVLSNANYKSVEHRVAVN-SANERVSLAFFY-NPK 311 (361)
Q Consensus 274 vGd~L~~~TnG~~~s~~HRV~~~-~~~~R~Si~~F~-~P~ 311 (361)
.-.- + ..+|.|... ..+.|+||+-.+ .|.
T Consensus 200 ~vsp------~---~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 200 KVLP------G---FSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp ECCT------T---TCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred EcCC------C---CCcCCCCccCCCCCEEEEEEEeccCC
Confidence 5320 1 246766321 277899998755 453
Done!