Query 018098
Match_columns 361
No_of_seqs 329 out of 3355
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 09:55:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018098.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018098hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ihg_A Cyclophilin 40; ppiase 100.0 7.4E-76 2.5E-80 556.8 35.8 356 3-361 15-370 (370)
2 1a58_A Cyclophilin; isomerase, 100.0 5.1E-55 1.7E-59 366.7 18.7 171 3-173 6-176 (177)
3 2igv_A Peptidyl-prolyl CIS-tra 100.0 4.6E-55 1.6E-59 365.7 17.8 172 1-174 1-172 (173)
4 2wfi_A Peptidyl-prolyl CIS-tra 100.0 7.2E-55 2.5E-59 366.1 19.0 172 2-173 8-179 (179)
5 2he9_A NK-tumor recognition pr 100.0 1.4E-54 4.7E-59 367.2 19.0 174 1-174 17-190 (192)
6 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.5E-53 5.2E-58 359.0 17.6 170 1-172 17-186 (186)
7 2z6w_A Peptidyl-prolyl CIS-tra 100.0 3.7E-53 1.3E-57 351.4 17.7 163 1-173 1-164 (165)
8 1qng_A Peptidyl-prolyl CIS-tra 100.0 2.4E-53 8.4E-58 354.2 16.1 169 2-173 2-170 (170)
9 2cmt_A Peptidyl-prolyl CIS-tra 100.0 1.1E-52 3.9E-57 350.1 18.0 163 1-173 8-171 (172)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 2.2E-52 7.6E-57 349.0 18.3 164 1-173 9-172 (173)
11 1mzw_A Cyclophilin H, U-snRNP- 100.0 8.6E-53 3E-57 352.8 15.6 169 2-173 9-177 (177)
12 2haq_A Cyclophilin; rotamase, 100.0 1.2E-52 4E-57 349.2 15.6 163 1-173 9-172 (172)
13 3pmp_A Cyclophilin A; peptidyl 100.0 3.4E-52 1.2E-56 345.9 17.5 162 2-173 1-163 (164)
14 1z81_A Cyclophilin; structural 100.0 4.4E-52 1.5E-56 359.2 16.2 169 2-173 58-229 (229)
15 3rdd_A Peptidyl-prolyl CIS-tra 100.0 1.3E-51 4.4E-56 347.5 17.1 164 1-173 20-183 (184)
16 3ich_A Peptidyl-prolyl CIS-tra 100.0 7.6E-52 2.6E-56 349.6 14.2 163 3-174 15-178 (188)
17 3k2c_A Peptidyl-prolyl CIS-tra 100.0 3.8E-51 1.3E-55 346.8 18.2 165 1-174 25-191 (193)
18 4fru_A Cyclophilin B, peptidyl 100.0 2.2E-51 7.4E-56 347.5 15.4 164 3-174 12-175 (185)
19 2c3b_A Ppiase, cyclophilin; is 100.0 2.5E-50 8.6E-55 336.3 10.3 160 5-173 4-172 (172)
20 2ose_A Probable peptidyl-proly 100.0 1.1E-49 3.6E-54 347.2 12.9 175 2-178 13-211 (234)
21 2x7k_A Peptidyl-prolyl CIS-tra 100.0 7.8E-48 2.7E-52 319.4 14.4 155 2-173 10-165 (166)
22 2poe_A Cyclophilin-like protei 100.0 1.5E-47 5.2E-52 322.5 14.7 153 15-179 23-180 (185)
23 2b71_A Cyclophilin-like protei 100.0 1.7E-47 5.9E-52 324.0 14.6 156 3-175 38-194 (196)
24 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.3E-47 4.3E-52 317.2 13.4 152 15-178 7-160 (161)
25 2fu0_A Cyclophilin, putative; 100.0 1.6E-47 5.6E-52 315.5 13.7 154 3-173 5-159 (160)
26 1zkc_A Peptidyl-prolyl CIS-tra 100.0 4.4E-47 1.5E-51 321.3 13.8 151 15-177 26-178 (197)
27 2k7n_A Peptidyl-prolyl CIS-tra 100.0 9.7E-47 3.3E-51 320.3 15.8 161 2-179 10-171 (203)
28 2a2n_A Peptidylprolyl isomeras 100.0 4.4E-47 1.5E-51 317.2 11.3 151 10-172 23-175 (176)
29 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.7E-46 5.9E-51 320.9 13.8 161 3-180 6-179 (201)
30 1w74_A Peptidyl-prolyl CIS-tra 100.0 2.9E-46 9.8E-51 315.6 14.9 163 1-172 21-190 (191)
31 2hq6_A Serologically defined c 100.0 4.4E-46 1.5E-50 313.3 13.3 158 3-178 24-184 (185)
32 1v9t_A Cyclophilin B; beta bar 100.0 1.2E-44 4.2E-49 301.1 12.0 153 2-173 3-165 (166)
33 3bkp_A Cyclophilin; malaria, i 100.0 1.5E-44 5.1E-49 313.9 13.1 161 3-181 21-200 (232)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.2E-43 4E-48 296.0 11.9 153 2-173 2-167 (167)
35 1lop_A Cyclophilin A; rotamase 100.0 9.8E-44 3.3E-48 295.1 9.7 145 15-173 6-163 (164)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 6.2E-39 2.1E-43 294.0 7.2 137 3-152 170-344 (369)
37 3rkv_A Putative peptidylprolyl 99.9 1.1E-24 3.7E-29 181.0 12.1 157 205-361 4-161 (162)
38 4gco_A Protein STI-1; structur 99.9 1.9E-21 6.6E-26 155.0 13.4 114 210-341 11-124 (126)
39 2hr2_A Hypothetical protein; a 99.9 2E-21 6.7E-26 159.4 12.1 138 208-351 7-155 (159)
40 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 8.2E-20 2.8E-24 177.2 15.6 158 201-361 257-414 (457)
41 2fbn_A 70 kDa peptidylprolyl i 99.8 1.4E-19 4.9E-24 154.9 13.9 165 194-361 20-185 (198)
42 1p5q_A FKBP52, FK506-binding p 99.8 3.6E-19 1.2E-23 165.8 17.1 158 201-361 136-293 (336)
43 4gcn_A Protein STI-1; structur 99.8 8.2E-19 2.8E-23 139.8 11.5 115 208-341 4-125 (127)
44 2if4_A ATFKBP42; FKBP-like, al 99.8 3.7E-19 1.3E-23 165.8 10.2 163 198-361 165-327 (338)
45 3upv_A Heat shock protein STI1 99.8 2.6E-18 8.9E-23 135.9 11.7 117 211-345 3-125 (126)
46 3sz7_A HSC70 cochaperone (SGT) 99.7 1.9E-17 6.6E-22 137.2 13.0 123 210-350 9-133 (164)
47 3gyz_A Chaperone protein IPGC; 99.7 2.2E-17 7.5E-22 135.7 12.8 104 211-332 35-138 (151)
48 2xcb_A PCRH, regulatory protei 99.7 5E-17 1.7E-21 131.6 13.1 123 211-351 17-139 (142)
49 2vgx_A Chaperone SYCD; alterna 99.7 4.2E-17 1.4E-21 133.4 12.3 123 210-350 19-141 (148)
50 4ga2_A E3 SUMO-protein ligase 99.7 3.3E-17 1.1E-21 134.2 10.3 115 211-343 30-145 (150)
51 4ga2_A E3 SUMO-protein ligase 99.7 3.4E-17 1.2E-21 134.2 10.3 119 218-354 3-121 (150)
52 3q49_B STIP1 homology and U bo 99.7 1.1E-16 3.9E-21 127.7 10.8 123 211-351 8-135 (137)
53 3urz_A Uncharacterized protein 99.7 1.2E-15 4.2E-20 131.7 16.8 119 211-347 3-137 (208)
54 4gyw_A UDP-N-acetylglucosamine 99.7 4.1E-16 1.4E-20 158.7 13.6 125 210-352 7-131 (723)
55 1elw_A TPR1-domain of HOP; HOP 99.6 1.8E-15 6.2E-20 116.4 12.3 115 211-343 3-117 (118)
56 1a17_A Serine/threonine protei 99.6 8E-15 2.7E-19 120.3 15.8 119 206-342 7-125 (166)
57 2pl2_A Hypothetical conserved 99.6 1.3E-15 4.4E-20 132.4 11.3 122 212-351 5-137 (217)
58 2vyi_A SGTA protein; chaperone 99.6 5.1E-15 1.8E-19 115.9 13.4 122 208-347 8-129 (131)
59 4gyw_A UDP-N-acetylglucosamine 99.6 1.4E-15 4.9E-20 154.7 11.7 125 210-352 41-165 (723)
60 1hxi_A PEX5, peroxisome target 99.6 1.3E-15 4.5E-20 120.0 8.5 103 213-333 18-120 (121)
61 2lni_A Stress-induced-phosphop 99.6 3.1E-15 1.1E-19 117.9 10.4 117 211-345 15-131 (133)
62 2dba_A Smooth muscle cell asso 99.6 6.2E-15 2.1E-19 118.6 12.2 117 211-342 27-143 (148)
63 1elr_A TPR2A-domain of HOP; HO 99.6 5.2E-15 1.8E-19 116.0 11.4 120 211-349 3-129 (131)
64 4i17_A Hypothetical protein; T 99.6 1E-14 3.5E-19 127.0 14.1 124 212-353 7-138 (228)
65 1zu2_A Mitochondrial import re 99.6 3.8E-15 1.3E-19 121.7 10.2 108 222-347 12-140 (158)
66 3vtx_A MAMA; tetratricopeptide 99.6 1.4E-14 4.7E-19 121.7 13.9 126 211-354 4-163 (184)
67 2h6f_A Protein farnesyltransfe 99.6 4.1E-15 1.4E-19 140.6 11.1 86 259-344 161-246 (382)
68 2pl2_A Hypothetical conserved 99.6 1.2E-14 4E-19 126.3 12.3 123 211-352 38-171 (217)
69 2xev_A YBGF; tetratricopeptide 99.6 1.1E-14 3.8E-19 114.7 10.9 114 213-344 3-122 (129)
70 2h6f_A Protein farnesyltransfe 99.6 4.2E-15 1.4E-19 140.5 9.1 126 209-352 94-220 (382)
71 3k9i_A BH0479 protein; putativ 99.6 9.8E-15 3.4E-19 113.9 9.5 100 224-341 2-104 (117)
72 1wao_1 Serine/threonine protei 99.5 8.9E-15 3E-19 142.5 9.8 118 210-345 4-121 (477)
73 2c2l_A CHIP, carboxy terminus 99.5 2.7E-14 9.1E-19 129.3 12.0 103 211-331 3-105 (281)
74 3gyz_A Chaperone protein IPGC; 99.5 1.1E-14 3.7E-19 119.5 8.2 97 259-355 31-127 (151)
75 1na0_A Designed protein CTPR3; 99.5 1.3E-13 4.3E-18 106.9 13.8 116 211-344 8-123 (125)
76 3vtx_A MAMA; tetratricopeptide 99.5 1.2E-13 4.1E-18 115.9 13.5 123 211-333 38-176 (184)
77 4gco_A Protein STI-1; structur 99.5 1E-13 3.6E-18 109.9 11.2 96 259-354 8-103 (126)
78 4i17_A Hypothetical protein; T 99.5 1.7E-13 5.9E-18 119.1 13.6 119 212-348 42-169 (228)
79 3urz_A Uncharacterized protein 99.5 1.4E-13 4.8E-18 118.7 12.3 105 218-341 60-199 (208)
80 1hh8_A P67PHOX, NCF-2, neutrop 99.5 1.6E-13 5.3E-18 117.8 12.4 122 211-353 5-142 (213)
81 2e2e_A Formate-dependent nitri 99.5 3.6E-13 1.2E-17 112.4 13.7 114 211-342 43-159 (177)
82 2kck_A TPR repeat; tetratricop 99.5 9.4E-14 3.2E-18 105.7 8.3 103 212-332 6-111 (112)
83 2fo7_A Synthetic consensus TPR 99.5 7.8E-13 2.7E-17 103.5 13.1 122 213-352 2-123 (136)
84 2vsy_A XCC0866; transferase, g 99.5 3.7E-13 1.3E-17 133.5 13.4 126 210-353 21-149 (568)
85 2vgx_A Chaperone SYCD; alterna 99.4 2.4E-13 8.1E-18 110.9 9.3 96 259-354 16-111 (148)
86 4abn_A Tetratricopeptide repea 99.4 5.1E-13 1.8E-17 129.9 12.6 124 212-353 170-313 (474)
87 3as5_A MAMA; tetratricopeptide 99.4 1.4E-12 4.9E-17 108.0 13.1 124 212-353 42-165 (186)
88 4abn_A Tetratricopeptide repea 99.4 7.2E-13 2.4E-17 128.9 12.7 124 211-353 101-242 (474)
89 3uq3_A Heat shock protein STI1 99.4 6.8E-13 2.3E-17 116.4 11.4 98 213-328 140-237 (258)
90 2pzi_A Probable serine/threoni 99.4 2.5E-13 8.6E-18 137.9 9.6 124 211-353 432-555 (681)
91 1xnf_A Lipoprotein NLPI; TPR, 99.4 2.4E-12 8.4E-17 114.1 14.8 114 210-341 41-154 (275)
92 3qky_A Outer membrane assembly 99.4 6.1E-13 2.1E-17 118.3 10.6 107 211-335 14-134 (261)
93 1hh8_A P67PHOX, NCF-2, neutrop 99.4 1.8E-12 6.1E-17 111.1 12.4 103 212-332 37-155 (213)
94 3uq3_A Heat shock protein STI1 99.4 4.4E-12 1.5E-16 111.1 14.3 141 211-351 37-226 (258)
95 1fch_A Peroxisomal targeting s 99.4 1.1E-12 3.9E-17 121.5 10.9 123 212-352 217-350 (368)
96 3as5_A MAMA; tetratricopeptide 99.4 2E-12 6.7E-17 107.2 11.2 125 211-353 7-131 (186)
97 2pzi_A Probable serine/threoni 99.4 1.6E-13 5.5E-18 139.4 5.2 115 211-344 466-580 (681)
98 3ieg_A DNAJ homolog subfamily 99.4 3.5E-12 1.2E-16 117.1 13.8 122 214-349 236-357 (359)
99 2q7f_A YRRB protein; TPR, prot 99.4 4.6E-12 1.6E-16 110.2 13.7 124 211-352 56-179 (243)
100 4eqf_A PEX5-related protein; a 99.4 2E-12 6.7E-17 120.3 11.9 120 216-353 181-302 (365)
101 2e2e_A Formate-dependent nitri 99.4 4.4E-13 1.5E-17 111.9 6.6 122 215-354 13-137 (177)
102 2l6j_A TPR repeat-containing p 99.4 8.5E-14 2.9E-18 106.4 2.1 95 211-323 3-103 (111)
103 4eqf_A PEX5-related protein; a 99.4 1.4E-12 4.9E-17 121.2 10.8 125 211-353 212-348 (365)
104 3qky_A Outer membrane assembly 99.4 5.6E-12 1.9E-16 112.0 14.0 119 212-345 52-198 (261)
105 2xcb_A PCRH, regulatory protei 99.4 1.9E-12 6.5E-17 104.3 9.8 96 259-354 13-108 (142)
106 2yhc_A BAMD, UPF0169 lipoprote 99.4 4.7E-12 1.6E-16 110.3 13.0 111 212-337 4-135 (225)
107 3qou_A Protein YBBN; thioredox 99.4 2.4E-12 8.3E-17 116.7 11.5 124 211-352 116-275 (287)
108 2ho1_A Type 4 fimbrial biogene 99.4 6.7E-12 2.3E-16 110.2 13.5 121 212-350 71-193 (252)
109 1w3b_A UDP-N-acetylglucosamine 99.4 3.4E-12 1.2E-16 119.8 12.4 121 211-349 66-186 (388)
110 3u4t_A TPR repeat-containing p 99.4 1.7E-12 5.7E-17 115.3 9.6 120 213-351 4-127 (272)
111 2q7f_A YRRB protein; TPR, prot 99.4 4.1E-12 1.4E-16 110.5 11.9 124 211-352 90-213 (243)
112 2vq2_A PILW, putative fimbrial 99.4 8.3E-12 2.9E-16 107.0 13.7 122 212-351 42-166 (225)
113 2r5s_A Uncharacterized protein 99.4 3.6E-12 1.2E-16 106.6 10.9 121 213-351 7-163 (176)
114 2vq2_A PILW, putative fimbrial 99.4 6.2E-12 2.1E-16 107.8 12.7 126 210-353 6-134 (225)
115 1w3b_A UDP-N-acetylglucosamine 99.4 4.8E-12 1.6E-16 118.8 12.9 140 212-351 169-324 (388)
116 1xnf_A Lipoprotein NLPI; TPR, 99.3 7E-12 2.4E-16 111.2 12.8 123 217-353 10-132 (275)
117 3ieg_A DNAJ homolog subfamily 99.3 4E-12 1.4E-16 116.7 11.4 112 211-340 2-116 (359)
118 2kat_A Uncharacterized protein 99.3 6.8E-12 2.3E-16 97.0 10.9 101 230-348 3-105 (115)
119 1qqe_A Vesicular transport pro 99.3 8.8E-12 3E-16 113.1 13.3 131 211-353 76-220 (292)
120 3upv_A Heat shock protein STI1 99.3 1.1E-11 3.9E-16 97.2 12.1 93 262-354 2-94 (126)
121 4gcn_A Protein STI-1; structur 99.3 4.3E-12 1.5E-16 100.5 9.6 93 260-352 4-103 (127)
122 3u4t_A TPR repeat-containing p 99.3 9.2E-12 3.1E-16 110.5 12.5 118 212-347 74-191 (272)
123 3cv0_A Peroxisome targeting si 99.3 7.1E-12 2.4E-16 113.8 11.8 124 211-352 171-306 (327)
124 2ho1_A Type 4 fimbrial biogene 99.3 5.9E-12 2E-16 110.5 10.8 125 211-353 36-162 (252)
125 2gw1_A Mitochondrial precursor 99.3 1.1E-11 3.9E-16 119.8 13.3 107 209-334 3-109 (514)
126 3edt_B KLC 2, kinesin light ch 99.3 1.6E-11 5.5E-16 108.8 13.2 134 210-353 41-190 (283)
127 2y4t_A DNAJ homolog subfamily 99.3 2.2E-11 7.5E-16 116.1 14.2 120 215-348 260-379 (450)
128 3hym_B Cell division cycle pro 99.3 1.2E-11 4.1E-16 112.4 11.8 125 211-353 89-214 (330)
129 3mkr_A Coatomer subunit epsilo 99.3 1.5E-11 5E-16 111.8 12.2 118 211-348 129-250 (291)
130 2yhc_A BAMD, UPF0169 lipoprote 99.3 1.3E-11 4.4E-16 107.5 11.1 124 212-353 41-205 (225)
131 2y4t_A DNAJ homolog subfamily 99.3 2.3E-11 7.9E-16 116.0 13.9 114 210-341 24-140 (450)
132 3hym_B Cell division cycle pro 99.3 1.6E-11 5.5E-16 111.6 12.1 94 259-352 188-290 (330)
133 1hxi_A PEX5, peroxisome target 99.3 5.4E-11 1.8E-15 93.3 13.4 89 266-354 19-107 (121)
134 1fch_A Peroxisomal targeting s 99.3 2.5E-11 8.6E-16 112.4 13.3 118 217-353 187-306 (368)
135 2fo7_A Synthetic consensus TPR 99.3 2.8E-11 9.4E-16 94.5 11.2 102 212-331 35-136 (136)
136 4g1t_A Interferon-induced prot 99.3 3E-11 1E-15 116.2 12.6 127 211-346 50-186 (472)
137 1na3_A Designed protein CTPR2; 99.3 7.1E-11 2.4E-15 86.5 11.8 83 262-344 7-89 (91)
138 3sz7_A HSC70 cochaperone (SGT) 99.3 5.1E-11 1.7E-15 98.1 12.0 94 261-354 8-101 (164)
139 1qqe_A Vesicular transport pro 99.3 3E-11 1E-15 109.5 11.5 132 209-352 34-178 (292)
140 2l6j_A TPR repeat-containing p 99.2 7.7E-11 2.6E-15 89.6 11.7 84 263-346 3-92 (111)
141 1p5q_A FKBP52, FK506-binding p 99.2 5.9E-12 2E-16 116.8 6.4 112 225-354 126-252 (336)
142 2vsy_A XCC0866; transferase, g 99.2 2.5E-11 8.7E-16 120.3 11.3 111 225-353 2-112 (568)
143 2hr2_A Hypothetical protein; a 99.2 5.1E-11 1.7E-15 97.4 10.6 92 263-354 10-124 (159)
144 3edt_B KLC 2, kinesin light ch 99.2 5.8E-11 2E-15 105.1 11.5 109 209-327 82-198 (283)
145 3ma5_A Tetratricopeptide repea 99.2 4.2E-11 1.4E-15 90.5 8.8 83 259-341 2-86 (100)
146 3fp2_A TPR repeat-containing p 99.2 4.8E-11 1.7E-15 116.3 11.6 144 209-352 240-398 (537)
147 3cv0_A Peroxisome targeting si 99.2 9.9E-11 3.4E-15 106.1 12.6 115 221-353 147-261 (327)
148 3mkr_A Coatomer subunit epsilo 99.2 8.2E-11 2.8E-15 106.8 11.9 96 224-337 178-274 (291)
149 3fp2_A TPR repeat-containing p 99.2 9.4E-11 3.2E-15 114.2 12.9 127 215-353 239-365 (537)
150 3ulq_A Response regulator aspa 99.2 1.3E-10 4.4E-15 109.1 13.1 133 210-353 141-285 (383)
151 3ro3_A PINS homolog, G-protein 99.2 1.8E-10 6E-15 92.9 12.2 132 210-353 7-150 (164)
152 2kc7_A BFR218_protein; tetratr 99.2 9.8E-12 3.4E-16 93.2 4.0 89 217-331 5-94 (99)
153 3q49_B STIP1 homology and U bo 99.2 1.5E-10 5E-15 91.7 10.8 95 259-353 4-98 (137)
154 3n71_A Histone lysine methyltr 99.2 2.6E-10 8.8E-15 110.9 14.4 143 204-356 301-459 (490)
155 1kt0_A FKBP51, 51 kDa FK506-bi 99.2 2.4E-11 8.2E-16 117.5 6.4 113 224-354 246-373 (457)
156 1na3_A Designed protein CTPR2; 99.2 1E-10 3.5E-15 85.6 8.4 84 211-312 8-91 (91)
157 2xpi_A Anaphase-promoting comp 99.2 2.1E-10 7.3E-15 113.4 13.3 125 211-353 372-496 (597)
158 3nf1_A KLC 1, kinesin light ch 99.2 2.8E-10 9.6E-15 102.4 12.8 134 210-353 109-299 (311)
159 3nf1_A KLC 1, kinesin light ch 99.2 2.6E-10 8.9E-15 102.6 12.5 133 211-353 68-216 (311)
160 2gw1_A Mitochondrial precursor 99.1 2.3E-10 8E-15 110.5 11.9 115 212-344 372-495 (514)
161 2fbn_A 70 kDa peptidylprolyl i 99.1 1.7E-10 5.9E-15 98.0 9.7 96 259-354 33-144 (198)
162 3u3w_A Transcriptional activat 99.1 1.9E-10 6.4E-15 104.1 10.0 107 211-328 154-267 (293)
163 2ifu_A Gamma-SNAP; membrane fu 99.1 1.4E-10 4.9E-15 105.8 9.2 108 211-331 75-188 (307)
164 2xpi_A Anaphase-promoting comp 99.1 4.5E-10 1.5E-14 111.0 13.2 142 211-352 406-570 (597)
165 2lni_A Stress-induced-phosphop 99.1 6.2E-10 2.1E-14 87.0 11.4 94 260-353 12-105 (133)
166 2kck_A TPR repeat; tetratricop 99.1 5.2E-11 1.8E-15 90.2 4.9 91 263-353 5-98 (112)
167 3gw4_A Uncharacterized protein 99.1 3.7E-10 1.3E-14 95.4 10.6 130 211-352 25-167 (203)
168 3rkv_A Putative peptidylprolyl 99.1 4.1E-10 1.4E-14 92.4 10.5 93 262-354 9-119 (162)
169 2ifu_A Gamma-SNAP; membrane fu 99.1 3.5E-10 1.2E-14 103.2 11.1 108 211-332 115-228 (307)
170 2ond_A Cleavage stimulation fa 99.1 2.8E-10 9.7E-15 103.8 10.1 120 212-349 99-220 (308)
171 1dce_A Protein (RAB geranylger 99.1 8.6E-10 3E-14 109.3 13.8 119 209-345 60-191 (567)
172 1a17_A Serine/threonine protei 99.1 3.7E-10 1.3E-14 92.0 9.2 100 211-328 46-147 (166)
173 3u3w_A Transcriptional activat 99.1 3.9E-10 1.3E-14 102.0 10.2 124 212-347 115-251 (293)
174 3q15_A PSP28, response regulat 99.1 7.5E-10 2.6E-14 103.7 12.5 132 210-352 139-281 (378)
175 3ulq_A Response regulator aspa 99.1 6E-10 2.1E-14 104.5 11.4 127 215-353 106-245 (383)
176 3q15_A PSP28, response regulat 99.1 1.1E-09 3.8E-14 102.6 13.2 109 210-330 180-293 (378)
177 2qfc_A PLCR protein; TPR, HTH, 99.1 4.9E-10 1.7E-14 101.4 10.4 128 212-351 115-255 (293)
178 2kc7_A BFR218_protein; tetratr 99.1 1E-09 3.5E-14 82.0 10.4 68 268-335 4-72 (99)
179 4a1s_A PINS, partner of inscut 99.1 5.1E-10 1.7E-14 105.4 10.5 124 210-347 46-181 (411)
180 1elw_A TPR1-domain of HOP; HOP 99.1 2.1E-09 7.1E-14 81.8 12.1 91 263-353 3-93 (118)
181 2vyi_A SGTA protein; chaperone 99.1 2.6E-09 8.7E-14 82.8 12.8 95 259-353 7-101 (131)
182 1pc2_A Mitochondria fission pr 99.0 7.6E-10 2.6E-14 89.4 9.2 104 226-347 12-120 (152)
183 1ouv_A Conserved hypothetical 99.0 3.4E-09 1.2E-13 94.3 13.7 109 212-344 6-122 (273)
184 3sf4_A G-protein-signaling mod 99.0 1.3E-09 4.4E-14 101.8 11.1 130 211-352 186-327 (406)
185 2xev_A YBGF; tetratricopeptide 99.0 2.6E-09 8.8E-14 83.4 11.2 88 266-353 4-97 (129)
186 2dba_A Smooth muscle cell asso 99.0 2.2E-09 7.4E-14 85.6 10.9 95 259-353 23-120 (148)
187 2if4_A ATFKBP42; FKBP-like, al 99.0 1.7E-10 5.9E-15 107.0 4.7 103 214-334 232-335 (338)
188 3ro2_A PINS homolog, G-protein 99.0 1.2E-09 4.2E-14 98.7 10.2 123 211-347 4-138 (338)
189 2ond_A Cleavage stimulation fa 99.0 5.3E-09 1.8E-13 95.3 14.0 106 229-352 33-154 (308)
190 4a1s_A PINS, partner of inscut 99.0 9.9E-10 3.4E-14 103.4 9.4 130 211-352 222-363 (411)
191 3sf4_A G-protein-signaling mod 99.0 2.6E-09 8.8E-14 99.8 11.8 130 211-352 126-287 (406)
192 3ro3_A PINS homolog, G-protein 99.0 2.8E-09 9.7E-14 85.6 10.5 108 211-330 48-161 (164)
193 1wao_1 Serine/threonine protei 99.0 1.3E-10 4.5E-15 112.9 2.9 103 211-331 39-154 (477)
194 3dra_A Protein farnesyltransfe 99.0 1.5E-09 5E-14 99.1 9.5 122 209-348 100-236 (306)
195 4g1t_A Interferon-induced prot 99.0 1.2E-09 4.2E-14 104.8 9.4 124 211-344 93-221 (472)
196 1na0_A Designed protein CTPR3; 99.0 5.7E-09 2E-13 80.1 11.5 91 263-353 8-98 (125)
197 2qfc_A PLCR protein; TPR, HTH, 99.0 2.3E-08 8E-13 90.2 17.4 132 210-353 73-217 (293)
198 2c2l_A CHIP, carboxy terminus 99.0 1.8E-09 6.3E-14 97.3 9.9 92 263-354 3-94 (281)
199 3ro2_A PINS homolog, G-protein 99.0 1.9E-09 6.6E-14 97.3 10.1 131 211-353 182-324 (338)
200 1elr_A TPR2A-domain of HOP; HO 99.0 3.1E-09 1.1E-13 82.4 9.7 91 263-353 3-100 (131)
201 1ouv_A Conserved hypothetical 99.0 7.1E-09 2.4E-13 92.2 13.1 110 211-344 37-158 (273)
202 3qww_A SET and MYND domain-con 98.9 7.2E-09 2.4E-13 99.1 13.6 127 205-341 291-430 (433)
203 3rjv_A Putative SEL1 repeat pr 98.9 3.8E-09 1.3E-13 91.0 10.5 134 210-344 16-174 (212)
204 4f3v_A ESX-1 secretion system 98.9 5.8E-09 2E-13 93.5 11.9 109 214-340 137-249 (282)
205 3dss_A Geranylgeranyl transfer 98.9 2.1E-08 7.2E-13 92.2 15.5 117 211-345 63-192 (331)
206 1dce_A Protein (RAB geranylger 98.9 5.7E-09 2E-13 103.4 12.5 120 222-359 38-170 (567)
207 1zu2_A Mitochondrial import re 98.9 9.3E-10 3.2E-14 89.7 5.4 74 207-298 31-125 (158)
208 3dra_A Protein farnesyltransfe 98.9 6.5E-09 2.2E-13 94.8 11.0 118 211-346 66-194 (306)
209 3rjv_A Putative SEL1 repeat pr 98.9 3.5E-09 1.2E-13 91.2 8.5 109 220-344 19-137 (212)
210 3q7a_A Farnesyltransferase alp 98.9 2.2E-08 7.5E-13 92.5 13.5 111 221-349 63-176 (349)
211 3qwp_A SET and MYND domain-con 98.9 2.3E-08 8E-13 95.6 14.1 121 212-342 287-420 (429)
212 3k9i_A BH0479 protein; putativ 98.9 2.8E-09 9.6E-14 82.5 6.2 76 209-302 24-99 (117)
213 3gw4_A Uncharacterized protein 98.8 1.5E-08 5E-13 85.4 10.4 109 210-329 64-178 (203)
214 2r5s_A Uncharacterized protein 98.8 1.3E-08 4.5E-13 84.6 9.5 119 208-326 36-172 (176)
215 1ihg_A Cyclophilin 40; ppiase 98.8 1.6E-08 5.5E-13 94.9 10.9 93 262-354 221-329 (370)
216 3dss_A Geranylgeranyl transfer 98.8 3.6E-08 1.2E-12 90.6 12.3 115 209-341 105-236 (331)
217 2v5f_A Prolyl 4-hydroxylase su 98.8 5.5E-08 1.9E-12 73.8 10.8 83 265-347 6-95 (104)
218 2v5f_A Prolyl 4-hydroxylase su 98.8 2.7E-08 9.2E-13 75.6 9.0 83 212-305 5-87 (104)
219 3q7a_A Farnesyltransferase alp 98.8 1.7E-08 5.8E-13 93.3 9.3 118 211-346 87-215 (349)
220 3bee_A Putative YFRE protein; 98.8 2.7E-08 9.2E-13 74.0 8.6 73 261-333 3-78 (93)
221 4f3v_A ESX-1 secretion system 98.8 2.3E-08 7.8E-13 89.6 9.5 123 212-353 102-229 (282)
222 3ma5_A Tetratricopeptide repea 98.8 4.7E-09 1.6E-13 79.0 4.3 69 211-297 6-74 (100)
223 2ooe_A Cleavage stimulation fa 98.7 3.3E-08 1.1E-12 96.9 9.3 120 211-348 320-441 (530)
224 3qou_A Protein YBBN; thioredox 98.7 2.9E-08 1E-12 89.6 8.0 117 210-326 149-283 (287)
225 1hz4_A MALT regulatory protein 98.7 1.3E-07 4.3E-12 87.9 12.3 129 211-351 52-193 (373)
226 1nzn_A CGI-135 protein, fissio 98.6 3.3E-07 1.1E-11 71.3 11.2 105 225-347 14-123 (126)
227 1klx_A Cysteine rich protein B 98.6 1.8E-07 6E-12 74.8 10.1 98 218-339 31-136 (138)
228 2ooe_A Cleavage stimulation fa 98.6 4.8E-07 1.6E-11 88.6 15.2 106 229-352 255-376 (530)
229 2kat_A Uncharacterized protein 98.6 1.4E-07 4.7E-12 72.3 8.9 73 281-353 2-74 (115)
230 3n71_A Histone lysine methyltr 98.6 6.8E-08 2.3E-12 93.8 8.0 116 210-335 349-472 (490)
231 2xm6_A Protein corresponding t 98.6 2.2E-07 7.4E-12 90.1 11.4 80 262-343 361-451 (490)
232 1hz4_A MALT regulatory protein 98.6 4.5E-07 1.5E-11 84.2 12.0 132 209-353 11-156 (373)
233 1klx_A Cysteine rich protein B 98.4 1.5E-06 5.2E-11 69.3 9.6 94 225-344 8-105 (138)
234 3e4b_A ALGK; tetratricopeptide 98.4 1.5E-06 5.1E-11 83.6 11.3 109 212-343 176-294 (452)
235 2xm6_A Protein corresponding t 98.4 3E-06 1E-10 82.0 13.2 109 211-343 38-158 (490)
236 3ly7_A Transcriptional activat 98.4 2.2E-06 7.4E-11 79.3 11.3 121 212-333 196-345 (372)
237 3u64_A Protein TP_0956; tetrat 98.4 2.1E-06 7.2E-11 76.4 10.3 90 224-331 175-273 (301)
238 4b4t_Q 26S proteasome regulato 98.3 9.1E-06 3.1E-10 76.6 13.8 120 211-330 54-207 (434)
239 1pc2_A Mitochondria fission pr 98.3 3.5E-06 1.2E-10 67.9 8.8 79 211-307 31-114 (152)
240 1xi4_A Clathrin heavy chain; a 98.2 7.4E-06 2.5E-10 86.9 12.0 108 213-346 1196-1328(1630)
241 4b4t_Q 26S proteasome regulato 98.2 6.4E-06 2.2E-10 77.7 10.4 138 213-351 5-154 (434)
242 3e4b_A ALGK; tetratricopeptide 98.2 1.1E-05 3.6E-10 77.6 11.6 107 210-342 246-364 (452)
243 3o48_A Mitochondria fission 1 98.2 2.6E-05 8.8E-10 60.8 11.5 86 263-348 39-128 (134)
244 3mv2_B Coatomer subunit epsilo 98.1 1.1E-05 3.8E-10 73.1 10.3 123 213-354 101-233 (310)
245 1y8m_A FIS1; mitochondria, unk 98.1 4.5E-05 1.5E-09 60.2 11.9 85 263-347 38-126 (144)
246 1b89_A Protein (clathrin heavy 98.1 1.5E-05 5.1E-10 75.6 10.4 115 205-346 141-255 (449)
247 3bee_A Putative YFRE protein; 98.0 7.1E-06 2.4E-10 60.7 5.7 69 211-297 5-76 (93)
248 1xi4_A Clathrin heavy chain; a 98.0 4E-05 1.4E-09 81.5 12.7 110 216-330 1053-1166(1630)
249 3u64_A Protein TP_0956; tetrat 97.9 3.8E-05 1.3E-09 68.4 9.8 140 205-344 66-251 (301)
250 3qwp_A SET and MYND domain-con 97.9 1.4E-05 4.7E-10 76.3 7.1 92 210-311 327-426 (429)
251 3mv2_B Coatomer subunit epsilo 97.9 5.2E-05 1.8E-09 68.7 10.3 114 212-346 136-269 (310)
252 3qww_A SET and MYND domain-con 97.9 2.1E-05 7.1E-10 75.1 7.1 73 211-293 339-411 (433)
253 1b89_A Protein (clathrin heavy 97.8 1.1E-05 3.6E-10 76.6 4.4 127 212-351 61-196 (449)
254 3ffl_A Anaphase-promoting comp 97.8 0.00016 5.6E-09 58.6 10.0 118 214-341 22-164 (167)
255 1nzn_A CGI-135 protein, fissio 97.4 0.00049 1.7E-08 53.3 7.8 78 212-307 35-117 (126)
256 2ff4_A Probable regulatory pro 97.4 0.0025 8.4E-08 59.8 13.4 114 213-326 116-233 (388)
257 3ffl_A Anaphase-promoting comp 97.3 0.00057 1.9E-08 55.4 7.3 97 211-308 62-165 (167)
258 3o48_A Mitochondria fission 1 97.2 0.0025 8.5E-08 49.6 9.2 76 214-307 42-121 (134)
259 1y8m_A FIS1; mitochondria, unk 97.0 0.0035 1.2E-07 49.4 8.4 45 262-306 75-119 (144)
260 4e6h_A MRNA 3'-END-processing 97.0 0.0036 1.2E-07 63.0 10.7 104 228-349 325-451 (679)
261 4e6h_A MRNA 3'-END-processing 96.9 0.0076 2.6E-07 60.6 13.0 132 217-348 383-520 (679)
262 4gns_B Protein CSD3, chitin bi 96.7 0.0069 2.4E-07 61.2 10.6 64 261-324 334-397 (754)
263 4h7y_A Dual specificity protei 96.7 0.017 5.9E-07 45.9 10.6 97 227-334 34-130 (161)
264 3ly7_A Transcriptional activat 96.6 0.0036 1.2E-07 57.8 6.9 73 212-304 277-349 (372)
265 3kae_A CDC27, possible protein 95.7 0.086 3E-06 42.7 9.7 73 263-335 61-151 (242)
266 3txn_A 26S proteasome regulato 95.4 0.072 2.5E-06 49.7 9.9 99 217-327 104-210 (394)
267 2uy1_A Cleavage stimulation fa 95.4 0.11 3.6E-06 50.2 11.2 134 212-347 213-369 (493)
268 1ya0_A SMG-7 transcript varian 95.3 0.11 3.7E-06 50.1 10.8 83 263-345 151-233 (497)
269 4b4t_R RPN7, 26S proteasome re 95.1 0.043 1.5E-06 52.0 7.6 102 213-329 132-239 (429)
270 1zbp_A Hypothetical protein VP 95.1 0.15 5.1E-06 44.6 10.2 66 273-338 6-71 (273)
271 2uy1_A Cleavage stimulation fa 94.3 0.22 7.6E-06 47.9 10.5 112 213-347 287-399 (493)
272 4gns_B Protein CSD3, chitin bi 94.1 0.05 1.7E-06 55.0 5.5 59 214-290 339-397 (754)
273 1zbp_A Hypothetical protein VP 94.0 0.22 7.4E-06 43.6 8.5 62 220-299 5-66 (273)
274 3txn_A 26S proteasome regulato 92.1 3.6 0.00012 38.1 14.4 148 210-357 17-206 (394)
275 3mkq_B Coatomer subunit alpha; 91.7 0.76 2.6E-05 37.6 8.2 29 212-240 34-62 (177)
276 2v6y_A AAA family ATPase, P60 91.3 0.73 2.5E-05 32.6 6.8 39 208-246 7-45 (83)
277 4g26_A Pentatricopeptide repea 91.1 1.5 5E-05 42.2 11.1 107 225-350 83-193 (501)
278 2ff4_A Probable regulatory pro 91.1 2.2 7.5E-05 39.5 11.9 87 266-352 117-225 (388)
279 4g26_A Pentatricopeptide repea 90.6 1.3 4.4E-05 42.7 10.1 101 213-331 106-210 (501)
280 2cpt_A SKD1 protein, vacuolar 90.0 0.84 2.9E-05 34.6 6.6 40 207-246 13-52 (117)
281 2w2u_A Hypothetical P60 katani 90.0 0.99 3.4E-05 31.9 6.5 42 205-246 12-53 (83)
282 1ya0_A SMG-7 transcript varian 89.9 0.59 2E-05 44.9 7.0 82 211-310 151-232 (497)
283 3mkq_A Coatomer beta'-subunit; 89.5 1.1 3.7E-05 45.2 9.1 26 265-290 682-707 (814)
284 4h7y_A Dual specificity protei 89.1 0.94 3.2E-05 36.0 6.3 93 259-352 8-114 (161)
285 3mkr_B Coatomer subunit alpha; 88.6 7.2 0.00025 34.8 12.5 113 215-330 105-230 (320)
286 4b4t_P 26S proteasome regulato 88.3 4.9 0.00017 37.9 12.2 105 211-327 136-247 (445)
287 3kop_A Uncharacterized protein 87.9 1 3.5E-05 36.5 5.9 117 6-152 22-167 (188)
288 3mv2_A Coatomer subunit alpha; 87.8 7.3 0.00025 34.8 12.0 117 215-334 117-243 (325)
289 3mkq_A Coatomer beta'-subunit; 86.5 1.7 5.7E-05 43.8 8.2 17 307-323 745-761 (814)
290 1wfd_A Hypothetical protein 15 85.7 1.8 6.2E-05 31.2 5.8 39 208-246 11-49 (93)
291 4b4t_S RPN3, 26S proteasome re 85.1 2.1 7.3E-05 41.1 7.5 71 262-332 229-304 (523)
292 4fhn_B Nucleoporin NUP120; pro 84.2 4.3 0.00015 43.2 10.3 105 215-323 845-963 (1139)
293 2wb7_A PT26-6P; extra chromoso 83.2 3.8 0.00013 38.7 8.1 31 280-310 455-486 (526)
294 3mkq_B Coatomer subunit alpha; 82.7 11 0.00038 30.6 9.9 48 273-325 14-61 (177)
295 2crb_A Nuclear receptor bindin 82.4 1.2 4E-05 31.8 3.4 35 210-244 13-47 (97)
296 4b4t_R RPN7, 26S proteasome re 82.3 1.8 6.1E-05 40.7 5.8 76 266-341 133-213 (429)
297 2v6x_A Vacuolar protein sortin 81.4 1.6 5.6E-05 30.8 4.0 38 208-245 9-46 (85)
298 4a5x_A MITD1, MIT domain-conta 80.9 2.2 7.7E-05 30.2 4.5 35 211-245 15-49 (86)
299 4b4t_P 26S proteasome regulato 80.4 15 0.0005 34.5 11.5 87 263-349 136-231 (445)
300 2dl1_A Spartin; SPG20, MIT, st 79.6 7.6 0.00026 29.0 7.1 79 205-283 15-97 (116)
301 1qsa_A Protein (soluble lytic 77.3 4.7 0.00016 39.8 7.1 54 273-326 294-347 (618)
302 3rau_A Tyrosine-protein phosph 76.5 45 0.0015 30.3 13.4 121 205-327 110-281 (363)
303 3r9m_A BRO1 domain-containing 75.3 14 0.00046 34.0 9.3 122 206-327 108-282 (376)
304 2crb_A Nuclear receptor bindin 74.8 4.2 0.00014 29.0 4.3 22 266-287 17-38 (97)
305 1wy6_A Hypothetical protein ST 72.2 20 0.00068 28.0 7.9 61 268-328 94-155 (172)
306 2nnz_A Hypothetical protein; b 71.2 2.3 7.8E-05 33.8 2.6 105 8-150 32-142 (153)
307 3kae_A CDC27, possible protein 67.6 48 0.0016 26.9 10.3 55 266-325 35-89 (242)
308 2dl1_A Spartin; SPG20, MIT, st 67.5 9.3 0.00032 28.6 5.0 62 280-349 19-84 (116)
309 3spa_A Mtrpol, DNA-directed RN 67.2 40 0.0014 35.4 11.2 100 213-327 128-230 (1134)
310 3t5v_B Nuclear mRNA export pro 66.1 13 0.00045 35.1 7.1 104 225-331 139-254 (455)
311 3c3r_A Programmed cell death 6 65.5 22 0.00077 32.6 8.5 121 207-327 137-304 (380)
312 3lpz_A GET4 (YOR164C homolog); 64.5 80 0.0027 28.3 12.0 107 209-321 32-159 (336)
313 2vkj_A TM1634; membrane protei 63.7 14 0.00049 26.0 5.0 31 210-240 51-81 (106)
314 3ax2_A Mitochondrial import re 63.1 24 0.00081 24.0 6.0 31 304-334 23-53 (73)
315 3spa_A Mtrpol, DNA-directed RN 62.5 57 0.002 34.2 11.3 93 265-359 128-227 (1134)
316 2xs1_A Programmed cell death 6 60.7 33 0.0011 34.3 9.3 121 207-327 122-289 (704)
317 4a5x_A MITD1, MIT domain-conta 58.9 43 0.0015 23.4 8.8 26 302-327 20-45 (86)
318 3esl_A Checkpoint serine/threo 58.7 77 0.0026 26.2 11.1 86 233-328 58-145 (202)
319 3qtm_A Uncharacterized protein 56.6 99 0.0034 26.8 10.5 106 205-310 15-131 (346)
320 2cfu_A SDSA1; SDS-hydrolase, l 56.5 27 0.00093 34.6 7.8 52 298-349 449-500 (658)
321 2v6y_A AAA family ATPase, P60 56.2 47 0.0016 23.0 7.2 15 317-331 37-51 (83)
322 4gq2_M Nucleoporin NUP120; bet 55.8 15 0.00051 38.2 6.0 52 270-325 816-867 (950)
323 1zb1_A BRO1 protein; AIP1, BRO 55.0 46 0.0016 30.5 8.7 118 207-326 118-285 (392)
324 2w2u_A Hypothetical P60 katani 54.1 52 0.0018 22.8 7.5 13 318-330 46-58 (83)
325 4b4t_S RPN3, 26S proteasome re 53.7 22 0.00075 34.1 6.2 74 212-298 231-304 (523)
326 2o8p_A 14-3-3 domain containin 53.5 29 0.00099 29.3 6.3 59 224-292 137-196 (227)
327 3t5x_A PCI domain-containing p 52.6 22 0.00074 29.4 5.4 55 261-315 11-70 (203)
328 4fhn_B Nucleoporin NUP120; pro 52.4 20 0.00069 38.0 6.4 65 266-330 844-931 (1139)
329 4gq2_M Nucleoporin NUP120; bet 52.1 34 0.0012 35.6 7.9 76 215-293 843-926 (950)
330 2br9_A 14-3-3E, 14-3-3 protein 51.5 28 0.00095 29.6 5.9 54 228-291 146-200 (234)
331 2wpv_A GET4, UPF0363 protein Y 50.3 1.3E+02 0.0046 26.5 11.8 26 297-322 133-158 (312)
332 2g0u_A Type III secretion syst 49.3 59 0.002 23.1 6.3 43 313-355 31-73 (92)
333 3t5x_A PCI domain-containing p 48.9 43 0.0015 27.6 6.7 34 298-331 14-47 (203)
334 2npm_A 14-3-3 domain containin 48.1 38 0.0013 29.2 6.3 53 228-291 172-225 (260)
335 1o9d_A 14-3-3-like protein C; 45.7 38 0.0013 29.3 5.9 54 228-291 151-205 (260)
336 3ubw_A 14-3-3E, 14-3-3 protein 45.7 38 0.0013 29.2 5.9 54 228-291 172-226 (261)
337 3re2_A Predicted protein; meni 45.4 1.3E+02 0.0046 27.3 9.4 64 283-346 276-350 (472)
338 3uzd_A 14-3-3 protein gamma; s 45.4 39 0.0013 28.9 5.9 54 228-291 147-201 (248)
339 2v6x_A Vacuolar protein sortin 45.2 73 0.0025 22.0 7.4 20 307-326 22-41 (85)
340 2cfu_A SDSA1; SDS-hydrolase, l 44.9 28 0.00096 34.5 5.7 50 266-315 451-500 (658)
341 1om2_A Protein (mitochondrial 44.2 38 0.0013 24.3 4.8 39 204-242 12-50 (95)
342 3rk3_E Complexin-1; snare prot 44.1 48 0.0017 21.2 4.6 32 328-359 4-35 (63)
343 2ca5_A MXIH; transport protein 42.2 84 0.0029 21.8 6.2 28 317-344 29-56 (85)
344 3myv_A SUSD superfamily protei 42.1 31 0.0011 32.3 5.4 55 228-292 164-218 (454)
345 3eab_A Spastin; spastin, MIT, 42.1 54 0.0018 23.2 5.2 70 207-276 11-84 (89)
346 2rpa_A Katanin P60 ATPase-cont 41.9 25 0.00087 24.2 3.4 25 267-291 15-39 (78)
347 1om2_A Protein (mitochondrial 41.5 38 0.0013 24.3 4.4 28 268-295 24-51 (95)
348 2ymb_A MITD1, MIT domain-conta 41.0 5.7 0.0002 34.3 0.0 38 209-246 20-57 (257)
349 3kez_A Putative sugar binding 40.9 32 0.0011 32.3 5.3 32 261-292 193-224 (461)
350 3lew_A SUSD-like carbohydrate 40.2 21 0.00073 34.0 3.9 60 227-293 173-232 (495)
351 3iqu_A 14-3-3 protein sigma; s 39.8 53 0.0018 27.8 5.9 54 228-291 149-203 (236)
352 3mcx_A SUSD superfamily protei 39.8 36 0.0012 32.1 5.4 56 228-293 176-231 (477)
353 3efz_A 14-3-3 protein; 14-3-3, 39.4 55 0.0019 28.3 5.9 58 228-293 168-226 (268)
354 2cpt_A SKD1 protein, vacuolar 39.2 1.2E+02 0.004 22.6 9.1 17 317-333 44-60 (117)
355 3u84_A Menin; MLL, JUND, ledgf 38.9 1.8E+02 0.0062 27.0 9.4 64 283-346 298-372 (550)
356 3re2_A Predicted protein; meni 37.4 20 0.0007 32.5 2.9 48 231-291 276-323 (472)
357 2qx5_A Nucleoporin NIC96; mRNA 37.4 1.3E+02 0.0045 29.7 9.1 30 301-331 539-570 (661)
358 4gq4_A Menin; tumor suppressor 37.3 2.6E+02 0.0088 26.0 10.4 51 297-347 302-358 (489)
359 3l22_A SUSD superfamily protei 37.2 31 0.0011 32.2 4.5 32 260-291 197-228 (441)
360 3snx_A SUSD homolog, putative 36.8 47 0.0016 31.2 5.7 32 261-292 188-219 (460)
361 2xze_A STAM-binding protein; h 36.8 52 0.0018 25.6 5.0 45 203-247 31-75 (146)
362 3myv_A SUSD superfamily protei 36.8 60 0.002 30.3 6.4 47 281-327 165-219 (454)
363 3ax2_A Mitochondrial import re 36.1 43 0.0015 22.7 3.8 30 268-297 21-50 (73)
364 3u84_A Menin; MLL, JUND, ledgf 35.4 23 0.00077 32.8 2.9 48 231-291 298-345 (550)
365 3mcx_A SUSD superfamily protei 34.7 75 0.0026 29.8 6.8 49 280-328 176-232 (477)
366 4gq4_A Menin; tumor suppressor 34.5 24 0.00081 32.7 2.9 48 231-291 283-330 (489)
367 3kez_A Putative sugar binding 33.2 68 0.0023 30.0 6.2 47 281-327 171-225 (461)
368 3hdx_A SUSD homolog, SUSD supe 33.2 51 0.0018 31.0 5.3 34 260-293 193-226 (478)
369 2pmr_A Uncharacterized protein 33.0 43 0.0015 23.6 3.5 35 204-238 31-65 (87)
370 2oo2_A Hypothetical protein AF 31.8 44 0.0015 23.5 3.4 35 205-239 28-62 (86)
371 1wfd_A Hypothetical protein 15 30.8 1.4E+02 0.0048 21.0 9.1 14 317-330 41-54 (93)
372 3lew_A SUSD-like carbohydrate 30.6 84 0.0029 29.7 6.4 48 281-328 175-233 (495)
373 2vkj_A TM1634; membrane protei 30.6 1.4E+02 0.0049 21.0 6.7 30 262-291 51-80 (106)
374 2ijq_A Hypothetical protein; s 30.4 2E+02 0.0069 22.7 8.0 70 213-292 33-103 (161)
375 3qnk_A Putative lipoprotein; a 30.2 40 0.0014 32.2 4.1 33 261-293 179-211 (517)
376 2rkl_A Vacuolar protein sortin 28.5 83 0.0029 19.8 3.9 38 205-242 13-50 (53)
377 4abx_A DNA repair protein RECN 28.4 77 0.0026 25.3 4.9 49 281-329 73-121 (175)
378 2ijq_A Hypothetical protein; s 28.4 2.2E+02 0.0075 22.4 8.2 58 270-327 38-104 (161)
379 2zan_A Vacuolar protein sortin 28.2 12 0.00042 35.0 0.0 38 209-246 8-45 (444)
380 1qsa_A Protein (soluble lytic 27.7 3.7E+02 0.013 26.2 10.5 117 219-350 221-337 (618)
381 2k9u_B Filamin-binding LIM pro 26.8 30 0.001 18.0 1.3 19 109-127 2-20 (26)
382 2yhe_A SEC-alkyl sulfatase; hy 32.6 14 0.00047 36.9 0.0 50 299-348 462-511 (668)
383 2rpa_A Katanin P60 ATPase-cont 26.5 1.6E+02 0.0053 20.2 7.3 48 301-348 15-68 (78)
384 2xze_A STAM-binding protein; h 25.9 2.3E+02 0.0078 21.8 8.0 21 269-289 45-65 (146)
385 3bu8_A Telomeric repeat-bindin 25.7 1.6E+02 0.0053 24.7 6.1 42 272-313 122-163 (235)
386 4aez_C MAD3, mitotic spindle c 25.7 2.9E+02 0.01 23.0 8.3 63 260-328 116-180 (223)
387 3ph0_C ASCG; type III secretio 25.6 1.4E+02 0.0046 19.1 6.2 52 266-318 8-60 (61)
388 3lxu_X Tripeptidyl-peptidase 2 25.4 5.8E+02 0.02 27.6 11.9 87 258-345 1235-1330(1354)
389 2yhe_A SEC-alkyl sulfatase; hy 31.2 15 0.00051 36.6 0.0 52 266-317 463-514 (668)
390 1wy6_A Hypothetical protein ST 25.0 96 0.0033 24.2 4.5 32 263-294 124-155 (172)
391 3jq1_A SUSD superfamily protei 25.0 71 0.0024 30.1 4.7 31 262-292 178-208 (481)
392 3iqc_A FLIS, flagellar protein 24.9 1.7E+02 0.0057 22.2 5.9 38 208-245 32-69 (131)
393 1vh6_A Flagellar protein FLIS; 24.8 1.6E+02 0.0056 22.7 6.0 39 207-245 28-66 (145)
394 4b4t_O 26S proteasome regulato 23.8 3.5E+02 0.012 24.5 9.1 102 224-326 88-197 (393)
395 2wb7_A PT26-6P; extra chromoso 22.3 5E+02 0.017 24.6 10.5 93 204-327 421-516 (526)
396 2yin_A DOCK2, dedicator of cyt 22.1 1.9E+02 0.0065 26.9 6.9 96 213-310 36-138 (436)
397 4a1g_A Mitotic checkpoint seri 22.1 2.8E+02 0.0096 21.5 7.8 64 259-328 66-131 (152)
398 2r17_C Vacuolar protein sortin 21.8 1.5E+02 0.0051 26.0 5.7 66 262-328 141-225 (298)
399 3qnk_A Putative lipoprotein; a 21.3 1.5E+02 0.005 28.1 6.2 30 298-327 182-211 (517)
400 3jys_A SUSD superfamily protei 20.6 1.2E+02 0.004 28.8 5.3 30 263-292 187-222 (499)
401 1zx8_A Hypothetical protein TM 20.3 80 0.0027 24.2 3.3 45 101-150 73-123 (136)
No 1
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=7.4e-76 Score=556.76 Aligned_cols=356 Identities=49% Similarity=0.814 Sum_probs=326.2
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTG 82 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~ 82 (361)
||+|||||+|+|++.|+|+||||.+.||+||+||+.||++.+|+|...|+++||+||.||||||||||||||++.++|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 89999999999999999999999999999999999999998888766677889999999999999999999999889999
Q ss_pred CCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCccc
Q 018098 83 GESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPI 162 (361)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P~ 162 (361)
+.||||.+|+||++.++|+++|+|||||.||||+||||||++.+.|+||++|+|||+|++|++++++|+.++++. +.|.
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~-~~P~ 173 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKG-EKPA 173 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEET-TEES
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCC-Cccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998877 8899
Q ss_pred cceEeccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCchHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhh
Q 018098 163 ADVTITDCGEIPEGADDGISNFFNDGDSYPDWPADLDQTPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYL 242 (361)
Q Consensus 163 ~~v~I~~~~~l~~~~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~ 242 (361)
.+|.|.+|+++.....+.+...+..++.|++++.++.....+.++....+..++.+|+.+++.|+|++|+.+|++|+++.
T Consensus 174 ~~v~I~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~ 253 (370)
T 1ihg_A 174 KLCVIAECGELKEGDDWGIFPKDGSGDSHPDFPEDADVDLKDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYV 253 (370)
T ss_dssp SCEEEEEEEEECTTCCCCCSCCSSSCCCSCSSGGGSSSCTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEEEeccCccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 99999999999887777776666789999999999977777889999999999999999999999999999999999966
Q ss_pred ccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHH
Q 018098 243 DICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFE 322 (361)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~ 322 (361)
+... .....+....+++....+|.|+|.||.++++|++|+.+|++||+++|+++++++++|.+|..+|++++|+.+|+
T Consensus 254 ~~~~--~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~ 331 (370)
T 1ihg_A 254 EGSR--AAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLK 331 (370)
T ss_dssp HHHH--HHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCc--cccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 5421 11112223346888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 018098 323 KALKLEPNDGGIKKELAVAKKKIHERREQEKKQYRKMFQ 361 (361)
Q Consensus 323 ~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 361 (361)
+|++++|++..++..++.+...+++.++++++.|++||+
T Consensus 332 ~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 332 KAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999995
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=5.1e-55 Score=366.74 Aligned_cols=171 Identities=58% Similarity=0.993 Sum_probs=163.7
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTG 82 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~ 82 (361)
||+|||||+|+++++|+|+||||.+.||+||+||++||++.++.+...|+++||+|+.||||+|+|||||||++.++|+|
T Consensus 6 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 85 (177)
T 1a58_A 6 RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTG 85 (177)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSC
T ss_pred CcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCC
Confidence 89999999999999999999999999999999999999988776654567779999999999999999999998889999
Q ss_pred CCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCccc
Q 018098 83 GESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPI 162 (361)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P~ 162 (361)
++|+||.+|+||++.++|+++|+|||||.+|||++|||||++.+.|+||++|+|||+|++||++|++|++++++..+.|.
T Consensus 86 g~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~ 165 (177)
T 1a58_A 86 GESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPL 165 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEecccccc
Q 018098 163 ADVTITDCGEI 173 (361)
Q Consensus 163 ~~v~I~~~~~l 173 (361)
.+|.|.+|+++
T Consensus 166 ~~v~I~~~G~l 176 (177)
T 1a58_A 166 ADVVILNCGEL 176 (177)
T ss_dssp SCEEEEEEEEE
T ss_pred CCeEEEEeEEE
Confidence 99999999976
No 3
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=4.6e-55 Score=365.66 Aligned_cols=172 Identities=60% Similarity=1.073 Sum_probs=163.5
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDG 80 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~ 80 (361)
|.||+|||||+|+++++|+|+||||.+.||+||+||++||++.+|++. .++++||+|+.||||+|+|||||||++.++|
T Consensus 1 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G 79 (173)
T 2igv_A 1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGK-SGKPLHFKGSKFHRIIPNFMIQGGDFTRGNG 79 (173)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCc-cCccceECCCEEEEEECCCEEEcCCCCCCCC
Confidence 899999999999999999999999999999999999999998767653 4778899999999999999999999988899
Q ss_pred CCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
+|++|+||.+|+||++.++|+++|+|||||.||||++|||||++.+.|+||++|+|||+|++||++|++|+++++.. +.
T Consensus 80 ~gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~-~~ 158 (173)
T 2igv_A 80 TGGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQS-GK 158 (173)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-SC
T ss_pred CCCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998854 89
Q ss_pred cccceEeccccccC
Q 018098 161 PIADVTITDCGEIP 174 (361)
Q Consensus 161 P~~~v~I~~~~~l~ 174 (361)
|..+|.|.+|+++.
T Consensus 159 P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 159 PVKDCMIADCGQLK 172 (173)
T ss_dssp CSSCEEEEEEEEEC
T ss_pred CCCCEEEEEeEEEc
Confidence 99999999999874
No 4
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=7.2e-55 Score=366.07 Aligned_cols=172 Identities=60% Similarity=1.025 Sum_probs=164.9
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.||+|||||+|+++++|+|+||||.+.||+||+||++||++.++.+...++.+||+|+.||||+|+|||||||++.++|+
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 87 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGR 87 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCC
Confidence 39999999999999999999999999999999999999999888776667788999999999999999999999888999
Q ss_pred CCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCcc
Q 018098 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (361)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P 161 (361)
|++|+||.+|+||++.++|+++|+|||||.+|||++|||||++.+.|+||++|+|||+|++|||+|++|++++++..+.|
T Consensus 88 gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P 167 (179)
T 2wfi_A 88 GGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKP 167 (179)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCB
T ss_pred CCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccceEecccccc
Q 018098 162 IADVTITDCGEI 173 (361)
Q Consensus 162 ~~~v~I~~~~~l 173 (361)
..+|.|.+|+++
T Consensus 168 ~~~v~I~~~G~l 179 (179)
T 2wfi_A 168 FAEVRILSCGEL 179 (179)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999874
No 5
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=367.20 Aligned_cols=174 Identities=56% Similarity=0.941 Sum_probs=165.6
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDG 80 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~ 80 (361)
+.||+|||||+|+++++|+|+||||.+.||+||+||++||++.++.+...++.+||+|+.||||+|+|||||||++.++|
T Consensus 17 ~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G 96 (192)
T 2he9_A 17 RGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNG 96 (192)
T ss_dssp --CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCC
Confidence 45899999999999999999999999999999999999999988877666777899999999999999999999988899
Q ss_pred CCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
+|++||||.+|+||++.++|+++|+|||||.||||++|||||++.+.|+||++|+|||+|++||++|++|++++++..+.
T Consensus 97 ~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 176 (192)
T 2he9_A 97 KGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASR 176 (192)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred cccceEeccccccC
Q 018098 161 PIADVTITDCGEIP 174 (361)
Q Consensus 161 P~~~v~I~~~~~l~ 174 (361)
|..+|+|.+|+++.
T Consensus 177 P~~~v~I~~~g~l~ 190 (192)
T 2he9_A 177 PYADVRVIDCGVLA 190 (192)
T ss_dssp BSSCEEEEEEEECC
T ss_pred CcCCeEEEEeEEEc
Confidence 99999999999874
No 6
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.5e-53 Score=359.01 Aligned_cols=170 Identities=60% Similarity=0.958 Sum_probs=159.6
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDG 80 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~ 80 (361)
+.||+|||||+|+++++|+|+||||.+.||+||+||++||++.+|++. .+++++|+|+.||||+|+|||||||++.++|
T Consensus 17 ~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~-~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G 95 (186)
T 2poy_A 17 QGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQ-SGKPLCYTGSFFHRIIPQFMIQGGDFTRGDG 95 (186)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCT-TSSBSCCTTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccc-cCccceECCCEEEEEeCCCEEEeCCCCCCCC
Confidence 358999999999999999999999999999999999999998777754 4788889999999999999999999988899
Q ss_pred CCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
+|++|+||.+|+||++.++|.++|+|||||.||||++|||||++.+.|+||++|+|||+|++|||+|++|+++++. ++.
T Consensus 96 ~gg~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~-~~~ 174 (186)
T 2poy_A 96 TGGESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQ-NGK 174 (186)
T ss_dssp SCCCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCT-TSC
T ss_pred CCCCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999985 489
Q ss_pred cccceEeccccc
Q 018098 161 PIADVTITDCGE 172 (361)
Q Consensus 161 P~~~v~I~~~~~ 172 (361)
|..+|+|.+|++
T Consensus 175 P~~~v~I~~cG~ 186 (186)
T 2poy_A 175 PTKSVCITASGV 186 (186)
T ss_dssp CSSCEEEEEEEC
T ss_pred CCCCEEEEeCCC
Confidence 999999999974
No 7
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=3.7e-53 Score=351.38 Aligned_cols=163 Identities=58% Similarity=0.961 Sum_probs=154.8
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCce-eeeeEEEEeecCcEEEeCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKVIRFHRVIKGFMIQGGDISAGD 79 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~-y~~~~~~rv~~~~~iq~G~~~~~~ 79 (361)
|+||+|||||+|+++++|+|+||||.+.||+||+||++||++.++ | |+|+.||||+|+|||||||++.++
T Consensus 1 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~ 71 (165)
T 2z6w_A 1 MGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKG---------FGYKGSTFHRVIPSFMCQAGDFTNHN 71 (165)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCC---------ccCcCCEEEEEECCCEEEeCCccCCC
Confidence 889999999999999999999999999999999999999996532 6 999999999999999999998889
Q ss_pred CCCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCC
Q 018098 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~ 159 (361)
|+|+.|+||.+|+||++.++|.++|+|||||.+|||++|||||++.+.|+||++|+|||+|++||++|++|+++++ .++
T Consensus 72 g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~-~~~ 150 (165)
T 2z6w_A 72 GTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS-KSG 150 (165)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC-TTS
T ss_pred CCCCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 458
Q ss_pred ccccceEecccccc
Q 018098 160 CPIADVTITDCGEI 173 (361)
Q Consensus 160 ~P~~~v~I~~~~~l 173 (361)
.|..+|.|.+|+++
T Consensus 151 ~P~~~v~I~~~g~l 164 (165)
T 2z6w_A 151 RTSKKIVITDCGQL 164 (165)
T ss_dssp CCSSCEEEEEEEEC
T ss_pred CCCCcEEEEEeEEE
Confidence 99999999999986
No 8
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=2.4e-53 Score=354.19 Aligned_cols=169 Identities=59% Similarity=0.992 Sum_probs=158.1
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.||+|||||+|+++++|+|+||||.+.||+||+||++||++. +++. .+++++|+|+.||||+|+|||||||++.++|+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~-~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 79 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGS-RGKNLHYKNSIFHRIIPQFMCQGGDITNGNGS 79 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECT-TSSEECCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCc-cCccceECCCEEEEEECCCEEEcCCccCCCCC
Confidence 489999999999999999999999999999999999999853 3332 35667799999999999999999999888999
Q ss_pred CCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCcc
Q 018098 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (361)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P 161 (361)
|++|+||.+|+||++.++|+++|+|||||.||||++|||||++.+.|+||++|+|||+|++||++|++|+++++ .++.|
T Consensus 80 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t-~~~~P 158 (170)
T 1qng_A 80 GGESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA-KSGYV 158 (170)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC-TTCCC
T ss_pred CCccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC-CCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 45899
Q ss_pred ccceEecccccc
Q 018098 162 IADVTITDCGEI 173 (361)
Q Consensus 162 ~~~v~I~~~~~l 173 (361)
..+|.|.+|+++
T Consensus 159 ~~~v~I~~cG~l 170 (170)
T 1qng_A 159 KRSVVITDCGEL 170 (170)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeceeC
Confidence 999999999874
No 9
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=1.1e-52 Score=350.06 Aligned_cols=163 Identities=60% Similarity=0.992 Sum_probs=155.0
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCce-eeeeEEEEeecCcEEEeCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKVIRFHRVIKGFMIQGGDISAGD 79 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~-y~~~~~~rv~~~~~iq~G~~~~~~ 79 (361)
|.||+|||||+|+++++|+|+||||.+.||+||+||++||++.+| | |+|+.||||+|+|||||||++.++
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 78 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERG---------FGYHNCCFHRVIPQFMCQGGDFVKGD 78 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETTTEEEECCTTTSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCC---------ceECCCEEEEEECCCEEEcCCccCCC
Confidence 569999999999999999999999999999999999999997533 5 999999999999999999998889
Q ss_pred CCCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCC
Q 018098 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~ 159 (361)
|+|++|+||.+|+||++.++|+++|+||||+.||||++|||||++.+.|+||++|+|||+|++||++|++|+++++.. +
T Consensus 79 G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~-~ 157 (172)
T 2cmt_A 79 GTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKS-G 157 (172)
T ss_dssp SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTT-C
T ss_pred CCCCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998865 8
Q ss_pred ccccceEecccccc
Q 018098 160 CPIADVTITDCGEI 173 (361)
Q Consensus 160 ~P~~~v~I~~~~~l 173 (361)
.|..+|.|.+|+++
T Consensus 158 ~P~~~v~I~~~g~l 171 (172)
T 2cmt_A 158 KVKEPVIISRCGEL 171 (172)
T ss_dssp CCSSCEEEEEEEEE
T ss_pred CCCCCEEEEEeEeE
Confidence 99999999999986
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=2.2e-52 Score=349.04 Aligned_cols=164 Identities=56% Similarity=0.934 Sum_probs=155.0
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDG 80 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~ 80 (361)
|.||+|||||+|+++++|+|+||||.+.||+||+||++||++.+|+ +|+|+.||||+|+|||||||++.++|
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~--------~Y~g~~FhRvi~~f~iQgGd~~~~~g 80 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGF--------GFKGSSFHRIIPQFMCQGGDFTNHNG 80 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSC--------CSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCc--------eecCCEEEEeeCCCEEEeCCcCCCCC
Confidence 5699999999999999999999999999999999999999865332 39999999999999999999998899
Q ss_pred CCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
+|+.|+||..|+||++.++|+++|+|||||.|||+++|||||++.+.|+||++|+|||+|++||++|++|++++++. +.
T Consensus 81 ~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~-~~ 159 (173)
T 2r99_A 81 TGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKD-GK 159 (173)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-CC
T ss_pred CCCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998865 79
Q ss_pred cccceEecccccc
Q 018098 161 PIADVTITDCGEI 173 (361)
Q Consensus 161 P~~~v~I~~~~~l 173 (361)
|..+|.|.+|+++
T Consensus 160 P~~~v~I~~cG~l 172 (173)
T 2r99_A 160 PKQKVIIADCGEY 172 (173)
T ss_dssp CSSCEEEEEEEEC
T ss_pred CCCCeEEEEeeeE
Confidence 9999999999986
No 11
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=8.6e-53 Score=352.81 Aligned_cols=169 Identities=57% Similarity=0.967 Sum_probs=159.8
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.||+|||||+++++++|+|+||||.+.||+||+||++||+++.+. .|++++|+|+.||||+|+|||||||++.++|+
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~---~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 85 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK---DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGT 85 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE---TTEECSSTTCBCCEEETTTEEEECCTTTSSSC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC---cCccceECCCEEEEEECCCEEEcCCcccCCCC
Confidence 389999999999999999999999999999999999999987543 24556799999999999999999999888999
Q ss_pred CCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCcc
Q 018098 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (361)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P 161 (361)
|++|+||.+|+||++.++|+++|+|||||.||||++|||||++.+.|+||++|+|||+|++||++|++|++++++.++.|
T Consensus 86 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P 165 (177)
T 1mzw_A 86 GVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKP 165 (177)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCB
T ss_pred CCCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccceEecccccc
Q 018098 162 IADVTITDCGEI 173 (361)
Q Consensus 162 ~~~v~I~~~~~l 173 (361)
..+|.|.+|+++
T Consensus 166 ~~~v~I~~cG~l 177 (177)
T 1mzw_A 166 KLPVVISQCGEM 177 (177)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCEEEEeceeC
Confidence 999999999874
No 12
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.2e-52 Score=349.21 Aligned_cols=163 Identities=56% Similarity=0.899 Sum_probs=155.4
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCce-eeeeEEEEeecCcEEEeCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKVIRFHRVIKGFMIQGGDISAGD 79 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~-y~~~~~~rv~~~~~iq~G~~~~~~ 79 (361)
|.+|+|||||+|+++++|+|+||||.+.||+||+||++||++.+| | |+|+.||||+|+|||||||+..++
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~ 79 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHG---------FGYKDSIFHRVIQNFMIQGGDFTNFD 79 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CCSTTCBCCEEETTTEEEECCTTTSS
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEECCCEEecCCccCCC
Confidence 579999999999999999999999999999999999999976533 6 999999999999999999988889
Q ss_pred CCCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCC
Q 018098 80 GTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDND 159 (361)
Q Consensus 80 ~~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~ 159 (361)
|+|++|+||.+|+||++.++|. +|+|||||.||||++|||||++.+.|+||++|+|||+|++||++|++|++++++.++
T Consensus 80 g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~ 158 (172)
T 2haq_A 80 GTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHD 158 (172)
T ss_dssp SSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGG
T ss_pred CCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCC
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999998878
Q ss_pred ccccceEecccccc
Q 018098 160 CPIADVTITDCGEI 173 (361)
Q Consensus 160 ~P~~~v~I~~~~~l 173 (361)
.|..+|+|.+|+++
T Consensus 159 ~P~~~v~I~~~g~l 172 (172)
T 2haq_A 159 RPVKPVKIVASGEL 172 (172)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred cCCCCeEEEEeEEC
Confidence 99999999999874
No 13
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3.4e-52 Score=345.92 Aligned_cols=162 Identities=57% Similarity=0.943 Sum_probs=155.4
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCce-eeeeEEEEeecCcEEEeCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKVIRFHRVIKGFMIQGGDISAGDG 80 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~-y~~~~~~rv~~~~~iq~G~~~~~~~ 80 (361)
+||+|||||+|+++++|+|+||||.+.||+||+||++||+++++ | |+|+.||||+|+|||||||++.++|
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~~g 71 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHG---------FGYKDSIFHRVIPQFMLQGGDFTRHNG 71 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCC---------CcccCCEEEEEECCCeEEeCCCCCCCC
Confidence 69999999999999999999999999999999999999996543 5 9999999999999999999888899
Q ss_pred CCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
+|++|+||.+|++|++.++|+++|+|||||.+||+++|||||++.+.|+||++|+|||+|++||++|++|++++++. +.
T Consensus 72 ~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~-~~ 150 (164)
T 3pmp_A 72 TGGKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSAS-GK 150 (164)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-CC
T ss_pred CCCcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999874 89
Q ss_pred cccceEecccccc
Q 018098 161 PIADVTITDCGEI 173 (361)
Q Consensus 161 P~~~v~I~~~~~l 173 (361)
|..+|+|.+|+++
T Consensus 151 P~~~v~I~~cg~l 163 (164)
T 3pmp_A 151 TNATIKITDCGTV 163 (164)
T ss_dssp CSSCEEEEEEEEC
T ss_pred cccCEEEEeCeEE
Confidence 9999999999986
No 14
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=4.4e-52 Score=359.15 Aligned_cols=169 Identities=49% Similarity=0.922 Sum_probs=161.1
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.||+|||||+|+++++|+|+||||.+.||+||+||++||+++++.+ |+++||+|+.||||+|+|||||||++.++|+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~---g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~ 134 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVN---NLPVGYKNTIFHRVIKEFMIQGGDFINHNGS 134 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSS---SSBCSSTTEECCEEETTTEEEECCTTTSSSC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCc---CCCceECCCEEEEEeCCCEEEcCCCcCCCCC
Confidence 3899999999999999999999999999999999999999886654 6677999999999999999999999888999
Q ss_pred CCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEE--eChHHHHHHhccCCCCC-
Q 018098 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVI--KGMGVVRSIEHVMTGDN- 158 (361)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~--~g~~vl~~i~~~~~~~~- 158 (361)
|++||||.+|+||++.++|+++|+|||||.||||++|||||++.+.|+||++|+|||+|+ +||++|++|++++++..
T Consensus 135 Gg~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~ 214 (229)
T 1z81_A 135 GSLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYI 214 (229)
T ss_dssp CCCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTT
T ss_pred CCCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999 99999999999999886
Q ss_pred CccccceEecccccc
Q 018098 159 DCPIADVTITDCGEI 173 (361)
Q Consensus 159 ~~P~~~v~I~~~~~l 173 (361)
+.|..+|+|.+|+++
T Consensus 215 ~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 215 YKPKIPINVVECGEL 229 (229)
T ss_dssp CCBSSCEEEEEEEEC
T ss_pred CCCCCCeEEEeCeeC
Confidence 899999999999874
No 15
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=1.3e-51 Score=347.49 Aligned_cols=164 Identities=59% Similarity=0.974 Sum_probs=155.5
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDG 80 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~ 80 (361)
|.||+|||||+|+++++|+|+||||.+.||+||+||++||++++|++ |+|+.||||+|+|||||||++.++|
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~--------Y~g~~FhRvi~~f~iQgGd~~~~~g 91 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG--------YKGSCFHRIIPGFMCQGGDFTRHNG 91 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS--------STTCBCCEEETTTEEEECCTTTSSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcc--------cCCCEEEEccCCcEEEeCCCCCCCC
Confidence 67999999999999999999999999999999999999999874321 9999999999999999999988899
Q ss_pred CCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
+|+.|+||..|++|++.++|+++|+||||+.+||+++|||||++.+.|+||++|+|||+|++|||+|++|+++++.. +.
T Consensus 92 ~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~-g~ 170 (184)
T 3rdd_A 92 TGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRN-GK 170 (184)
T ss_dssp SCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-SC
T ss_pred CCCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCC-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998764 89
Q ss_pred cccceEecccccc
Q 018098 161 PIADVTITDCGEI 173 (361)
Q Consensus 161 P~~~v~I~~~~~l 173 (361)
|..+|+|.+|+++
T Consensus 171 P~~~v~I~~cG~l 183 (184)
T 3rdd_A 171 TSKKITIADCGQL 183 (184)
T ss_dssp CSSCEEEEEEEEC
T ss_pred CcCCeEEEeCeEE
Confidence 9999999999987
No 16
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7.6e-52 Score=349.64 Aligned_cols=163 Identities=59% Similarity=0.991 Sum_probs=156.0
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCce-eeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~-y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
+|+|||||+|+++++|+|+||||.+.||+||+||++||++.+| | |+|+.||||+|+|||||||+..++|+
T Consensus 15 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 85 (188)
T 3ich_A 15 TVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKG---------FGYKNSKFHRVIKDFMIQGGDFTRGDGT 85 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTS---------CSSTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCC---------ccccCCEEEEEECCCEEEcCCccCCCCC
Confidence 6899999999999999999999999999999999999986533 6 99999999999999999998778999
Q ss_pred CCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCcc
Q 018098 82 GGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (361)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P 161 (361)
|+.||||.+|+||++.++|+++|+|||||.||||++|||||++.+.|+||++|+|||+|++||++|++|++++++..+.|
T Consensus 86 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P 165 (188)
T 3ich_A 86 GGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKP 165 (188)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988899
Q ss_pred ccceEeccccccC
Q 018098 162 IADVTITDCGEIP 174 (361)
Q Consensus 162 ~~~v~I~~~~~l~ 174 (361)
..+|.|.+|+++.
T Consensus 166 ~~~v~I~~~~~l~ 178 (188)
T 3ich_A 166 LKDVIIADCGKIE 178 (188)
T ss_dssp SSCEEEEEEEEEE
T ss_pred CCCEEEEEeEEEe
Confidence 9999999999883
No 17
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=3.8e-51 Score=346.83 Aligned_cols=165 Identities=52% Similarity=0.850 Sum_probs=156.3
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDG 80 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~ 80 (361)
|+||+|||||+|+++++|+|+||||.+.||+||+||++||++++++ +|+|+.||||+|+|||||||++.++|
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~--------~Y~g~~FhRvi~~f~iQgGd~~~~~g 96 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGE--------GYKGSTFHRIIPGFMVQGGDYTAHNG 96 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTS--------SSTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCC--------cccCCEEEEEeCCCEEEeCCCCCCCC
Confidence 5799999999999999999999999999999999999999976432 29999999999999999999888899
Q ss_pred CCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 81 TGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 81 ~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
+|+.|+||.+|++|++.++|+++|+||||+.+|++++|||||++.+.|+||++|+|||+|++|||+|++|++++++. +.
T Consensus 97 ~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~-g~ 175 (193)
T 3k2c_A 97 TGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSES-GQ 175 (193)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTT-CC
T ss_pred cCCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCC-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985 78
Q ss_pred cc--cceEeccccccC
Q 018098 161 PI--ADVTITDCGEIP 174 (361)
Q Consensus 161 P~--~~v~I~~~~~l~ 174 (361)
|. .+|+|.+|+++.
T Consensus 176 P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 176 VKKGYRIEIRDCGVLG 191 (193)
T ss_dssp CCTTCCEEEEEEEECC
T ss_pred CccCccEEEEEceEeC
Confidence 88 999999999985
No 18
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.2e-51 Score=347.46 Aligned_cols=164 Identities=59% Similarity=0.991 Sum_probs=157.5
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTG 82 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~ 82 (361)
+|+|||||+|+++++|+|+||||.+.||+||+||++||++++|. +|+|+.||||+|+|||||||++.++|+|
T Consensus 12 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--------~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 83 (185)
T 4fru_A 12 TVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGF--------GYKDSKFHRVIKDFMIQGGDFTRGDGTG 83 (185)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC--------CSTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCC--------eEcCCEEEEeeCCCeEEECCCCCCCCCC
Confidence 68999999999999999999999999999999999999875432 6999999999999999999999899999
Q ss_pred CCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCccc
Q 018098 83 GESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPI 162 (361)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P~ 162 (361)
+.|+||..|++|++.++|+++|+|||||.+||+++|||||++.+.|+||++|+|||+|++||++|++|++++++.++.|.
T Consensus 84 g~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~ 163 (185)
T 4fru_A 84 GKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPL 163 (185)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEeccccccC
Q 018098 163 ADVTITDCGEIP 174 (361)
Q Consensus 163 ~~v~I~~~~~l~ 174 (361)
.+|+|.+|+++.
T Consensus 164 ~~v~I~~~g~l~ 175 (185)
T 4fru_A 164 KDVTIADCGKIE 175 (185)
T ss_dssp SCEEEEEEEEEE
T ss_pred CCEEEEEceEEe
Confidence 999999999884
No 19
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.5e-50 Score=336.31 Aligned_cols=160 Identities=54% Similarity=0.925 Sum_probs=121.9
Q ss_pred eEEEEEEeC--Ceee---eEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCce-eeeeEEEEeecCcEEEeCCCCCC
Q 018098 5 RCFLDISIG--VELE---GRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLH-YKVIRFHRVIKGFMIQGGDISAG 78 (361)
Q Consensus 5 ~v~~~~~~~--~~~~---G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~-y~~~~~~rv~~~~~iq~G~~~~~ 78 (361)
+|||||+|+ |++. |+|+||||.+.||+||+||++||++.+| + |+|+.||||+|+|||||||+..+
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g---------~~Y~g~~fhRvi~~f~iQgGd~~~~ 74 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAG---------EGYRESTFHRIIPNFMIQGGDFTRG 74 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTT---------TSSTTCBCCEEETTTEEEECC----
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCC---------cccCCCEEEEEeCCCEEEeCCcCCC
Confidence 899999999 8766 9999999999999999999999997643 4 99999999999999999997778
Q ss_pred CCCCCCccCCCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEe--ChHHHHHHhccCCC
Q 018098 79 DGTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIK--GMGVVRSIEHVMTG 156 (361)
Q Consensus 79 ~~~~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~--g~~vl~~i~~~~~~ 156 (361)
+|+|++|+||.+|+||++.++|+++|+|||||.+||+++|||||++.+.|+||++|+|||+|++ ||++|++|++++++
T Consensus 75 ~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~ 154 (172)
T 2c3b_A 75 NGTGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSS 154 (172)
T ss_dssp ------------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCT
T ss_pred CCCCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999999998
Q ss_pred CCC-ccccceEecccccc
Q 018098 157 DND-CPIADVTITDCGEI 173 (361)
Q Consensus 157 ~~~-~P~~~v~I~~~~~l 173 (361)
..+ .|..+|+|.+|+++
T Consensus 155 ~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 155 SGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp TSCCCSSSCCEEEEEEEC
T ss_pred CCCccCCCCeEEEeCeeC
Confidence 755 89999999999874
No 20
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=1.1e-49 Score=347.18 Aligned_cols=175 Identities=28% Similarity=0.514 Sum_probs=153.1
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCC---------CCCCCceeeeeEEEEeecCcEEEe
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGP---------NTGVPLHYKVIRFHRVIKGFMIQG 72 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~---------~~~~~~~y~~~~~~rv~~~~~iq~ 72 (361)
.||+|||||+|+++++|+|+||||.+.||+||+||++||++++.+-. ..|++..|+|+.||||+|+|||||
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQg 92 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVS 92 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEc
Confidence 48999999999999999999999999999999999999997632211 013333399999999999999999
Q ss_pred CCCCCCCCCCCCccCCCC-----CCCCccccCCCCceEEEeec----CCCCCCCcceEEecCC------CCCCCCCceEE
Q 018098 73 GDISAGDGTGGESIYGLK-----FEDENFELKHERKGMLSMAN----AGPNTNGSQFFITTTR------TSHLDGKHVVF 137 (361)
Q Consensus 73 G~~~~~~~~~~~~~~~~~-----~~~e~~~~~~~~~g~l~~~~----~~~~~~~sqF~I~~~~------~~~ld~~~~vf 137 (361)
||+..++|+|++||||.. |+ ++.++|+++|+||||| .||||+||||||++.+ .|+||++|+||
T Consensus 93 Gd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVF 170 (234)
T 2ose_A 93 GDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVI 170 (234)
T ss_dssp CCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEE
T ss_pred CCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEE
Confidence 998778999999999998 77 5689999999999999 8999999999999999 89999999999
Q ss_pred eEEEeChHHHHHHhccCCCCCCccccceEeccccccCCCCC
Q 018098 138 GRVIKGMGVVRSIEHVMTGDNDCPIADVTITDCGEIPEGAD 178 (361)
Q Consensus 138 G~V~~g~~vl~~i~~~~~~~~~~P~~~v~I~~~~~l~~~~~ 178 (361)
|+|++|||+|++|++++++.++.|..+|.|.+|+++..++.
T Consensus 171 G~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~p~~ 211 (234)
T 2ose_A 171 GQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLDSSQ 211 (234)
T ss_dssp EEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCCHHH
T ss_pred EEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecCCcc
Confidence 99999999999999999998899999999999999976543
No 21
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=7.8e-48 Score=319.40 Aligned_cols=155 Identities=49% Similarity=0.816 Sum_probs=146.9
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.++.|.|+++ +|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++ ++|+
T Consensus 10 ~~~~v~l~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~ 72 (166)
T 2x7k_A 10 QPPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRG-----------YYNGTKFHRIIKDFMIQGGDPT-GTGR 72 (166)
T ss_dssp CCSEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHHT-----------TTTTEECCEEETTTEEEECCTT-SSSS
T ss_pred CCCEEEEEeC-----CCcEEEEEccCCCCHHHHHHHHHHhcC-----------CCCCCEEEEEECCCEEEcCCCC-CCCC
Confidence 3678899887 899999999999999999999999987 9999999999999999999987 7899
Q ss_pred CCCccCCCCCCCCc-cccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 82 GGESIYGLKFEDEN-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 82 ~~~~~~~~~~~~e~-~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
|+.|+||.+|++|+ ..++|.++|+|||||.||||++|||||++.+.|+||++|+|||+|++||++|++|++++++..+.
T Consensus 73 gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~ 152 (166)
T 2x7k_A 73 GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDR 152 (166)
T ss_dssp CCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSC
T ss_pred CCCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCC
Confidence 99999999999998 48999999999999999999999999999999999999999999999999999999999988889
Q ss_pred cccceEecccccc
Q 018098 161 PIADVTITDCGEI 173 (361)
Q Consensus 161 P~~~v~I~~~~~l 173 (361)
|..+|+|.++.++
T Consensus 153 P~~~i~I~~~~i~ 165 (166)
T 2x7k_A 153 PVDDVKIIKAYPS 165 (166)
T ss_dssp BSSCCEEEEEEEC
T ss_pred cCCCeEEEEEEEe
Confidence 9999999998765
No 22
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=1.5e-47 Score=322.53 Aligned_cols=153 Identities=44% Similarity=0.726 Sum_probs=144.0
Q ss_pred eeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCCCCccCCCCCCCC
Q 018098 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (361)
Q Consensus 15 ~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (361)
+++|+|+||||.+.||+||+||++||+++ ||+|+.||||+|+|||||||++ ++|+|+.|+||.+|++|
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 90 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSASG-----------YYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDE 90 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCC
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhccC-----------CCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCccccc
Confidence 56999999999999999999999999987 9999999999999999999987 78999999999999999
Q ss_pred c-cccCCCCceEEEeecCC----CCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCccccceEecc
Q 018098 95 N-FELKHERKGMLSMANAG----PNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCPIADVTITD 169 (361)
Q Consensus 95 ~-~~~~~~~~g~l~~~~~~----~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P~~~v~I~~ 169 (361)
+ ..++|+++|+||||+.| |||+||||||++.+.|+||++|+|||+|++||++|++|++++++..+.|..+|.|.+
T Consensus 91 ~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~ 170 (185)
T 2poe_A 91 IYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKD 170 (185)
T ss_dssp CCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEE
T ss_pred ccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEE
Confidence 8 68999999999999999 999999999999999999999999999999999999999999988899999999999
Q ss_pred ccccCCCCCC
Q 018098 170 CGEIPEGADD 179 (361)
Q Consensus 170 ~~~l~~~~~~ 179 (361)
|.++..++++
T Consensus 171 ~~i~~dPf~d 180 (185)
T 2poe_A 171 IVIHSNPIAD 180 (185)
T ss_dssp EEEECCC---
T ss_pred EEEECCCCCC
Confidence 9999766554
No 23
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.7e-47 Score=324.00 Aligned_cols=156 Identities=47% Similarity=0.694 Sum_probs=146.0
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTG 82 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~ 82 (361)
++.|.|+++ +|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|||||||||++ ++|+|
T Consensus 38 ~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Y~g~~FhRVi~~f~iQgGd~~-~~g~g 100 (196)
T 2b71_A 38 RGYITIYTN-----LGDFEVELYWYHSPKTCLNFYTLCEMG-----------FYDNTIFHRVIPNFVIQGGDPT-GTGKG 100 (196)
T ss_dssp SCEEEEEET-----TEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEEEEEEETTTEEEEEETT-SSSSC
T ss_pred CcEEEEEeC-----CCCEEEEEeCCCCcHHHHHHHHHhhcC-----------CcCCCEEEEEeCCcEEEcCCCC-CCCCC
Confidence 578888876 899999999999999999999999987 9999999999999999999987 78999
Q ss_pred CCccCCCCCCCCc-cccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCcc
Q 018098 83 GESIYGLKFEDEN-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (361)
Q Consensus 83 ~~~~~~~~~~~e~-~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P 161 (361)
++|+||.+|++|. ..++|+++|+||||+.||||+||||||++.+.|+||++|+|||+|++||++|++|++++++..+.|
T Consensus 101 g~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P 180 (196)
T 2b71_A 101 GKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKP 180 (196)
T ss_dssp CCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCB
T ss_pred CCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCC
Confidence 9999999999995 578999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccceEeccccccCC
Q 018098 162 IADVTITDCGEIPE 175 (361)
Q Consensus 162 ~~~v~I~~~~~l~~ 175 (361)
..+|.|.+|.++..
T Consensus 181 ~~~i~I~~~~i~~d 194 (196)
T 2b71_A 181 IFDLKILRTSTAVN 194 (196)
T ss_dssp SSCCEEEEEEC---
T ss_pred CCCeEEEEEEEecC
Confidence 99999999998754
No 24
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.3e-47 Score=317.18 Aligned_cols=152 Identities=47% Similarity=0.743 Sum_probs=143.9
Q ss_pred eeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCCCCccCCCCCCCC
Q 018098 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (361)
Q Consensus 15 ~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (361)
|++|+|+||||.+.||+||+||++||+++ ||+|+.||||+|||||||||++ ++|+|+.|+||.+|++|
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE 74 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCASN-----------YYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDE 74 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhhc-----------ccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCccccc
Confidence 45899999999999999999999999987 9999999999999999999987 78999999999999999
Q ss_pred cc-ccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCC-CccccceEeccccc
Q 018098 95 NF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDN-DCPIADVTITDCGE 172 (361)
Q Consensus 95 ~~-~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~-~~P~~~v~I~~~~~ 172 (361)
+. .++|+++|+||||+.||||++|||||++.+.|+||++|+|||+|++||++|++|++++++.. +.|..+|.|.++.+
T Consensus 75 ~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i 154 (161)
T 2ok3_A 75 YSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITI 154 (161)
T ss_dssp CCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEE
T ss_pred cCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEE
Confidence 86 68999999999999999999999999999999999999999999999999999999999886 89999999999999
Q ss_pred cCCCCC
Q 018098 173 IPEGAD 178 (361)
Q Consensus 173 l~~~~~ 178 (361)
+..+++
T Consensus 155 ~~~Pf~ 160 (161)
T 2ok3_A 155 HANPFA 160 (161)
T ss_dssp ECCSCC
T ss_pred ecCCCC
Confidence 876644
No 25
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.6e-47 Score=315.53 Aligned_cols=154 Identities=47% Similarity=0.692 Sum_probs=144.4
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTG 82 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~ 82 (361)
.+.|.++++ .|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++ ++|+|
T Consensus 5 ~~~v~~~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~fhRvi~~f~iQgGd~~-~~g~g 67 (160)
T 2fu0_A 5 PKSAIIYTT-----MGDIHISLFYKECKKTVQNFSVHSING-----------YYNNCIFHRVIKHFMVQTGDPS-GDGTG 67 (160)
T ss_dssp CCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTT-SSSSC
T ss_pred CCEEEEEec-----CccEEEEEeCCCChHHHHHHHHHhccC-----------ccCCCEEEEEECCCEEEeCCcC-CCCCC
Confidence 456667665 899999999999999999999999987 9999999999999999999986 68999
Q ss_pred CCccCCCCCCCCcc-ccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCcc
Q 018098 83 GESIYGLKFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDCP 161 (361)
Q Consensus 83 ~~~~~~~~~~~e~~-~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~P 161 (361)
++|+||.+|+||+. .++|+++|+||||+.+|||++|||||++.+.|+||++|+|||+|++||+++++|++++++.++.|
T Consensus 68 g~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P 147 (160)
T 2fu0_A 68 GESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKP 147 (160)
T ss_dssp CCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCB
T ss_pred CCcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCc
Confidence 99999999999998 69999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccceEecccccc
Q 018098 162 IADVTITDCGEI 173 (361)
Q Consensus 162 ~~~v~I~~~~~l 173 (361)
..+|.|.++.+.
T Consensus 148 ~~~v~I~~~~v~ 159 (160)
T 2fu0_A 148 LEDIKILNIKIN 159 (160)
T ss_dssp SSCCBEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999988654
No 26
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=4.4e-47 Score=321.33 Aligned_cols=151 Identities=44% Similarity=0.718 Sum_probs=142.8
Q ss_pred eeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCCCCccCCCCCCCC
Q 018098 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (361)
Q Consensus 15 ~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (361)
|+.|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++ ++|+|+.|+||.+|++|
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE 93 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLCKKH-----------YYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDE 93 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHHhcC-----------CCCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCccccc
Confidence 44899999999999999999999999987 9999999999999999999987 78999999999999999
Q ss_pred c-cccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCC-CccccceEeccccc
Q 018098 95 N-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDN-DCPIADVTITDCGE 172 (361)
Q Consensus 95 ~-~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~-~~P~~~v~I~~~~~ 172 (361)
. ..++|+++|+|||||.||||+||||||++.+.|+||++|+|||+|++||++|++|++++++.. +.|..+|.|.+|.+
T Consensus 94 ~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v 173 (197)
T 1zkc_A 94 FRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTV 173 (197)
T ss_dssp CCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEE
T ss_pred cCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEE
Confidence 4 789999999999999999999999999999999999999999999999999999999999886 89999999999999
Q ss_pred cCCCC
Q 018098 173 IPEGA 177 (361)
Q Consensus 173 l~~~~ 177 (361)
+..++
T Consensus 174 ~~dPf 178 (197)
T 1zkc_A 174 FVDPY 178 (197)
T ss_dssp EECTT
T ss_pred EcCCc
Confidence 86553
No 27
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=9.7e-47 Score=320.34 Aligned_cols=161 Identities=48% Similarity=0.796 Sum_probs=151.0
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.++.|.|+++ +|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++ ++|+
T Consensus 10 ~~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g-----------~Ydg~~FhRVi~~F~iQgGd~~-~~g~ 72 (203)
T 2k7n_A 10 QPPNVYLETS-----MGIIVLELYWKHAPKTCKNFAELARRG-----------YYNGTKFHRIIKDFMIQGGDPT-GTGR 72 (203)
T ss_dssp CCSEEEEEES-----SCEEEEEECTTTCTTHHHHHHHHHHHT-----------CGGGCEEEEEETTTEEEEECSS-SSSS
T ss_pred CCCEEEEEeC-----CCcEEEEEccCCCcHHHHHHHHHHhcC-----------ccCCCEEEEEeCCcEEEcCCCC-CCCC
Confidence 3678999887 899999999999999999999999987 9999999999999999999987 7899
Q ss_pred CCCccCCCCCCCCc-cccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCCCCCc
Q 018098 82 GGESIYGLKFEDEN-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTGDNDC 160 (361)
Q Consensus 82 ~~~~~~~~~~~~e~-~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~~~~~ 160 (361)
++.|+||.+|++|+ ..++|.++|+|||||.+||+++|||||++.+.|+||++|+|||+|++||++|++|++++++..+.
T Consensus 73 gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~ 152 (203)
T 2k7n_A 73 GGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDR 152 (203)
T ss_dssp CCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTE
T ss_pred CCCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCC
Confidence 99999999999998 48999999999999999999999999999999999999999999999999999999999988789
Q ss_pred cccceEeccccccCCCCCC
Q 018098 161 PIADVTITDCGEIPEGADD 179 (361)
Q Consensus 161 P~~~v~I~~~~~l~~~~~~ 179 (361)
|..+|+|.+|.++..+...
T Consensus 153 P~~~V~I~~~~v~~~~~s~ 171 (203)
T 2k7n_A 153 PVDDVKIIKAYPSGGGGSG 171 (203)
T ss_dssp ECCCCBEEEEEECCCCCCC
T ss_pred cCCCeEEEEEEEEecCCCC
Confidence 9999999999998765443
No 28
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=4.4e-47 Score=317.18 Aligned_cols=151 Identities=50% Similarity=0.717 Sum_probs=140.5
Q ss_pred EEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCCCCccCCC
Q 018098 10 ISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTGGESIYGL 89 (361)
Q Consensus 10 ~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~ 89 (361)
+.+-.+++|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++ ++|+|+.|+||.
T Consensus 23 ~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~ 90 (176)
T 2a2n_A 23 SAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNG-----------YYNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGG 90 (176)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSS
T ss_pred EEEEEecCccEEEEEeCCCChHHHHHHHHHhhcC-----------ccCCCEEEEEECCcEEEccCCC-CCCCCCCcccCC
Confidence 3333466999999999999999999999999987 9999999999999999999986 689999999999
Q ss_pred CCCCCcc-ccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHHHhccCCC-CCCccccceEe
Q 018098 90 KFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRSIEHVMTG-DNDCPIADVTI 167 (361)
Q Consensus 90 ~~~~e~~-~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~i~~~~~~-~~~~P~~~v~I 167 (361)
+|+||+. .++|+++|+||||+.||||++|||||++.+.|+||++|+|||+|++||++|++|++++++ .++.|..+|.|
T Consensus 91 ~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I 170 (176)
T 2a2n_A 91 EFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSI 170 (176)
T ss_dssp CBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBE
T ss_pred ccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEE
Confidence 9999998 699999999999999999999999999999999999999999999999999999999998 56899999999
Q ss_pred ccccc
Q 018098 168 TDCGE 172 (361)
Q Consensus 168 ~~~~~ 172 (361)
.++.+
T Consensus 171 ~~v~v 175 (176)
T 2a2n_A 171 INITV 175 (176)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88753
No 29
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-46 Score=320.94 Aligned_cols=161 Identities=34% Similarity=0.546 Sum_probs=141.5
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeC-----CCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGG-----DISA 77 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G-----~~~~ 77 (361)
+..|.|+++ .|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||| |++
T Consensus 6 ~~~v~l~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Ydg~~FhRvi~~f~iQgG~~~~~Dp~- 68 (201)
T 3bo7_A 6 KGYLRIVTT-----QGSLNIELHADMAPRACDSFLRLCAVK-----------YFDDTIFHRCIRNFMIQGGRAELRQPS- 68 (201)
T ss_dssp CEEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBEEEEETTTEEEECCGGGCCC--
T ss_pred ceEEEEEeC-----CCCEEEEEcCCCCcHHHHHHHHHHhcC-----------ccCCCEEEEeeCCCEEEcCcccccCCC-
Confidence 345556554 899999999999999999999999987 9999999999999999999 987
Q ss_pred CCCCCCCccC-------CCCCCCCc-cccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHHHH
Q 018098 78 GDGTGGESIY-------GLKFEDEN-FELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVVRS 149 (361)
Q Consensus 78 ~~~~~~~~~~-------~~~~~~e~-~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl~~ 149 (361)
++|+|+.|+| |.+|++|. ..++|+++|+||||+.||||+||||||++.+.|+||++|+|||+|++||++|++
T Consensus 69 ~~g~gg~si~~~~~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~ 148 (201)
T 3bo7_A 69 KKKEVQQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQ 148 (201)
T ss_dssp ------CCSSCCCSSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHH
T ss_pred CCCCCCccccccccccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHH
Confidence 7899999999 89999994 688999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCCccccceEeccccccCCCCCCC
Q 018098 150 IEHVMTGDNDCPIADVTITDCGEIPEGADDG 180 (361)
Q Consensus 150 i~~~~~~~~~~P~~~v~I~~~~~l~~~~~~~ 180 (361)
|+.++++..+.|..+|.|.+|+++..++++.
T Consensus 149 I~~~~t~~~~~P~~~i~I~~~~v~~dPf~d~ 179 (201)
T 3bo7_A 149 WEKLETDKKDKPLKPPKVEEIIVFKNPFEDA 179 (201)
T ss_dssp HTTCCBCTTSCBSSCCBEEEEEEEECCC---
T ss_pred HHhCCcCCCCCcCCCeEEEEEEEEcCCccCH
Confidence 9999999889999999999999997776655
No 30
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-46 Score=315.64 Aligned_cols=163 Identities=44% Similarity=0.699 Sum_probs=144.8
Q ss_pred CCCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCC-CCC---CCceeeeeEEEEeecCcEEEeCCCC
Q 018098 1 MARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGP-NTG---VPLHYKVIRFHRVIKGFMIQGGDIS 76 (361)
Q Consensus 1 ~~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~-~~~---~~~~y~~~~~~rv~~~~~iq~G~~~ 76 (361)
|.++.|.|+++ +|+|+||||.+.||+||+||++||++.+++.. ..| +..||+|+.||||+|+|||||||++
T Consensus 21 ~~~~~v~l~t~-----~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~ 95 (191)
T 1w74_A 21 LATATATLHTN-----RGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT 95 (191)
T ss_dssp CCSEEEEEEET-----TEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT
T ss_pred CCCeEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC
Confidence 34566777655 89999999999999999999999998877532 112 2359999999999999999999975
Q ss_pred CCCCCCCCccCCCCCCCC-ccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEe--ChHHHHHHhcc
Q 018098 77 AGDGTGGESIYGLKFEDE-NFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIK--GMGVVRSIEHV 153 (361)
Q Consensus 77 ~~~~~~~~~~~~~~~~~e-~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~--g~~vl~~i~~~ 153 (361)
++|+|+ ||.+|+|| ++.++|+++|+|||||.||||++|||||++.+.|+||++|+|||+|++ ||++|++|+++
T Consensus 96 -g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~ 171 (191)
T 1w74_A 96 -GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKT 171 (191)
T ss_dssp -SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTS
T ss_pred -CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcC
Confidence 677777 58899999 468999999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCCCCccccceEeccccc
Q 018098 154 MTGDNDCPIADVTITDCGE 172 (361)
Q Consensus 154 ~~~~~~~P~~~v~I~~~~~ 172 (361)
+++..+.|..+|.|.+|.+
T Consensus 172 ~t~~~~~P~~~v~I~~~~i 190 (191)
T 1w74_A 172 ATDGNDRPTDPVVIESITI 190 (191)
T ss_dssp CBCTTSCBSSCCEEEEEEE
T ss_pred CcCCCCCcCCCeEEEEEEE
Confidence 9988899999999999875
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=4.4e-46 Score=313.27 Aligned_cols=158 Identities=40% Similarity=0.720 Sum_probs=147.2
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTG 82 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~ 82 (361)
++.|+|+++ +|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++ ++|+|
T Consensus 24 ~~~V~l~T~-----~G~I~ieL~~~~aP~tv~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~-~~g~g 86 (185)
T 2hq6_A 24 NGKVLLKTT-----AGDIDIELWSKEAPKACRNFIQLCLEA-----------YYDNTIFHRVVPGFIVQGGDPT-GTGSG 86 (185)
T ss_dssp BCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHTT-----------TTTTEECCEEETTTEEEECCTT-SSSSC
T ss_pred CCEEEEEeC-----CccEEEEEeCCCCcHHHHHHHHHhhcC-----------ccCCCEEEEEECCCEEEcCCCC-CCCCC
Confidence 678999887 799999999999999999999999987 9999999999999999999987 78999
Q ss_pred CCccCCCCCCCCcc-ccCCCCceEEEeecCCCCCCCcceEEecCCCCCCCCCceEEeEEEeChHHH--HHHhccCCCCCC
Q 018098 83 GESIYGLKFEDENF-ELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLDGKHVVFGRVIKGMGVV--RSIEHVMTGDND 159 (361)
Q Consensus 83 ~~~~~~~~~~~e~~-~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~vl--~~i~~~~~~~~~ 159 (361)
+.|+||.+|++|+. .++|+++|+|||||.+||+++|||||++.+.|+||++|+|||+|+ |++++ ++|+.++++.++
T Consensus 87 g~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~ 165 (185)
T 2hq6_A 87 GESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDE 165 (185)
T ss_dssp CCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTS
T ss_pred CCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCC
Confidence 99999999999986 688999999999999999999999999999999999999999999 88774 678888888889
Q ss_pred ccccceEeccccccCCCCC
Q 018098 160 CPIADVTITDCGEIPEGAD 178 (361)
Q Consensus 160 ~P~~~v~I~~~~~l~~~~~ 178 (361)
.|..+|.|.+|+++..+++
T Consensus 166 ~P~~~v~I~~~~v~~~Pf~ 184 (185)
T 2hq6_A 166 RPHNPHKIKSCEVLFNPFD 184 (185)
T ss_dssp CBSSCCEEEEEEEEECTTC
T ss_pred CCCCCeEEEEEEEeCCCCC
Confidence 9999999999999876654
No 32
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.2e-44 Score=301.08 Aligned_cols=153 Identities=31% Similarity=0.495 Sum_probs=137.6
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.||+|+|+++ +|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++...+
T Consensus 3 ~~~~v~~~t~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~~- 65 (166)
T 1v9t_A 3 GDPHVLLTTS-----AGNIELELDKQKAPVSVQNFVDYVNSG-----------FYNNTTFHRVIPGFMIQGGGFTEQMQ- 65 (166)
T ss_dssp CSCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHTT-----------TTTTCBEEEEETTTEEEESSBCTTCC-
T ss_pred CCeEEEEEeC-----CccEEEEEcCCCCcHHHHHHHHHhccC-----------CCCCCEEEEEECCcEEEcCCcCcCCC-
Confidence 4899999976 899999999999999999999999887 99999999999999999999875332
Q ss_pred CCCccCCCCCCCCccccCCCCceEEEeecC-CCCCCCcceEEecCCCCCCCCC-----ceEEeEEEeChHHHHHHhccCC
Q 018098 82 GGESIYGLKFEDENFELKHERKGMLSMANA-GPNTNGSQFFITTTRTSHLDGK-----HVVFGRVIKGMGVVRSIEHVMT 155 (361)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~g~l~~~~~-~~~~~~sqF~I~~~~~~~ld~~-----~~vfG~V~~g~~vl~~i~~~~~ 155 (361)
.+.+|.+|++|+....|+.+|+||||+. +|||++|||||++.+.|+||++ |+|||+|++||++|++|+++++
T Consensus 66 --~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~ 143 (166)
T 1v9t_A 66 --QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPT 143 (166)
T ss_dssp --BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCE
T ss_pred --CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCC
Confidence 2346888999987766778999999997 5999999999999999999998 9999999999999999999988
Q ss_pred CC----CCccccceEecccccc
Q 018098 156 GD----NDCPIADVTITDCGEI 173 (361)
Q Consensus 156 ~~----~~~P~~~v~I~~~~~l 173 (361)
+. .+.|..+|.|.++.++
T Consensus 144 ~~~~~~~~~P~~~v~I~~~~v~ 165 (166)
T 1v9t_A 144 HDVGPYQNVPSKPVVILSATVL 165 (166)
T ss_dssp EEETTEEEEESSCCBEEEEEEC
T ss_pred CCCCccCCCcCCCeEEEEEEEe
Confidence 75 3679999999998765
No 33
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-44 Score=313.92 Aligned_cols=161 Identities=34% Similarity=0.573 Sum_probs=147.8
Q ss_pred CCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCC
Q 018098 3 RPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTG 82 (361)
Q Consensus 3 ~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~ 82 (361)
++.|+|+++ +|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++ ++|+|
T Consensus 21 ~~~V~l~T~-----~G~I~ieL~~d~aP~tv~NF~~L~~~g-----------~Ydgt~FhRVi~~FmiQgGdp~-~~G~G 83 (232)
T 3bkp_A 21 RGKVVLHTS-----LGDLDVELWARECPLACRNFVQLCLEG-----------YYVNTIFHRVVKDFIVQGGDPT-GTGRG 83 (232)
T ss_dssp BCEEEEEET-----TEEEEEEEBTTTCHHHHHHHHHHHHHT-----------TTTTCBEEEEETTTEEEECCTT-SSSSC
T ss_pred CCEEEEEEC-----CCcEEEEEcCCCCcHHHHHHHHHhhcC-----------ccCCCEEEEEeCCCEEEcCCCC-CCCCC
Confidence 568888887 799999999999999999999999987 9999999999999999999997 78999
Q ss_pred CCccC--CCCCCCCcc-ccCCCCceEEEeecCCC--------------CCCCcceEEecCCCCCCCCCceEEeEEEeChH
Q 018098 83 GESIY--GLKFEDENF-ELKHERKGMLSMANAGP--------------NTNGSQFFITTTRTSHLDGKHVVFGRVIKGMG 145 (361)
Q Consensus 83 ~~~~~--~~~~~~e~~-~~~~~~~g~l~~~~~~~--------------~~~~sqF~I~~~~~~~ld~~~~vfG~V~~g~~ 145 (361)
+.|+| |.+|++|+. .++|+.+|+||||+.++ +++||||||++.+.|+||++|+|||+|+ |++
T Consensus 84 g~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~ 162 (232)
T 3bkp_A 84 GADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHT 162 (232)
T ss_dssp CCCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGG
T ss_pred CCccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCc
Confidence 99999 999999986 68899999999999997 6999999999999999999999999999 776
Q ss_pred H--HHHHhccCCCCCCccccceEeccccccCCCCCCCC
Q 018098 146 V--VRSIEHVMTGDNDCPIADVTITDCGEIPEGADDGI 181 (361)
Q Consensus 146 v--l~~i~~~~~~~~~~P~~~v~I~~~~~l~~~~~~~l 181 (361)
+ +++|+.++++.++.|..+|.|.+|.++..++++..
T Consensus 163 v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~dPf~d~~ 200 (232)
T 3bkp_A 163 LYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFEDLV 200 (232)
T ss_dssp HHHHHHHTTSCBCGGGCBSSCCBEEEEEEEECCCTTCC
T ss_pred hHHHHHHHcCCcCCCCCcCCCeEEEEEEEEcCChhhhh
Confidence 6 88999999988899999999999999987766553
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1.2e-43 Score=296.02 Aligned_cols=153 Identities=32% Similarity=0.479 Sum_probs=136.3
Q ss_pred CCCeEEEEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCC
Q 018098 2 ARPRCFLDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGT 81 (361)
Q Consensus 2 ~~~~v~~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~ 81 (361)
.+|.|.|+++ +|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++...+
T Consensus 2 p~~~v~l~T~-----~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~~- 64 (167)
T 3s6m_A 2 PGSMVELHTN-----HGVIKLELDEAKAPKTVENFLNYVKKG-----------HYDGTIFHRVINGFMIQGGGFEPGLK- 64 (167)
T ss_dssp CCCEEEEEET-----TEEEEEEECTTTCHHHHHHHHHHHHHT-----------TTTTEECCEEETTTEEEESSEETTTE-
T ss_pred CCcEEEEEeC-----CceEEEEEeCCCCcHHHHHHHHHhhhc-----------ccCCCEeEEecCCcEEEeccccCCCC-
Confidence 3688888776 899999999999999999999999987 99999999999999999999875432
Q ss_pred CCCccCCCCCCCCccccCCCCceEEEeec-CCCCCCCcceEEecCCCCCCCCC--------ceEEeEEEeChHHHHHHhc
Q 018098 82 GGESIYGLKFEDENFELKHERKGMLSMAN-AGPNTNGSQFFITTTRTSHLDGK--------HVVFGRVIKGMGVVRSIEH 152 (361)
Q Consensus 82 ~~~~~~~~~~~~e~~~~~~~~~g~l~~~~-~~~~~~~sqF~I~~~~~~~ld~~--------~~vfG~V~~g~~vl~~i~~ 152 (361)
.+.++.+|++|.....++.+|+||||| .+|||+||||||++.+.++||++ |+|||+|++||++|++|++
T Consensus 65 --~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~ 142 (167)
T 3s6m_A 65 --QKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKA 142 (167)
T ss_dssp --ECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTT
T ss_pred --CCCCCCccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHc
Confidence 345688899997654456899999999 57999999999999999999998 9999999999999999999
Q ss_pred cCCCC----CCccccceEecccccc
Q 018098 153 VMTGD----NDCPIADVTITDCGEI 173 (361)
Q Consensus 153 ~~~~~----~~~P~~~v~I~~~~~l 173 (361)
++++. ++.|..+|.|.++.++
T Consensus 143 ~~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 143 VKTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp SCBBC---CBTCBSSCCEEEEEEEC
T ss_pred CCcCCCcccCCCcCCCeEEEEEEEC
Confidence 99987 5899999999988653
No 35
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=9.8e-44 Score=295.06 Aligned_cols=145 Identities=33% Similarity=0.546 Sum_probs=130.6
Q ss_pred eeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCCCCccCCCCCCCC
Q 018098 15 ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDE 94 (361)
Q Consensus 15 ~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e 94 (361)
|++|+|+||||.+.||+||+||++||+.+ ||+|+.||||+|+|||||||++.+. +.+++|.+|++|
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~~g-----------~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE 71 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCREG-----------FYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNE 71 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHHTT-----------TTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCC
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHhcC-----------CCCCCEEEEEeCCceEecCCcccCC---CcCCCCCccccc
Confidence 44899999999999999999999999987 9999999999999999999987433 456789999999
Q ss_pred ccccCCCCceEEEeecC-CCCCCCcceEEecCCCCCCCCC--------ceEEeEEEeChHHHHHHhccCCCC----CCcc
Q 018098 95 NFELKHERKGMLSMANA-GPNTNGSQFFITTTRTSHLDGK--------HVVFGRVIKGMGVVRSIEHVMTGD----NDCP 161 (361)
Q Consensus 95 ~~~~~~~~~g~l~~~~~-~~~~~~sqF~I~~~~~~~ld~~--------~~vfG~V~~g~~vl~~i~~~~~~~----~~~P 161 (361)
+....++.+|+||||+. +|||++|||||++.+.|+||++ |+|||+|++||++|++|++++++. .+.|
T Consensus 72 ~~~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P 151 (164)
T 1lop_A 72 ANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVP 151 (164)
T ss_dssp CCSSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEE
T ss_pred cccccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCc
Confidence 87533447999999975 7999999999999999999998 999999999999999999998875 4789
Q ss_pred ccceEecccccc
Q 018098 162 IADVTITDCGEI 173 (361)
Q Consensus 162 ~~~v~I~~~~~l 173 (361)
..+|.|.+|.++
T Consensus 152 ~~~v~I~~~~v~ 163 (164)
T 1lop_A 152 KEDVIIESVTVS 163 (164)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999999875
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=6.2e-39 Score=294.02 Aligned_cols=137 Identities=24% Similarity=0.380 Sum_probs=123.0
Q ss_pred CCeEEEEEEeCC---eeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCC
Q 018098 3 RPRCFLDISIGV---ELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGD 79 (361)
Q Consensus 3 ~~~v~~~~~~~~---~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~ 79 (361)
++.|.|++++.+ ++.|+|+|+||.+.||+||+||++||+.+ ||+|+.|||| +||||||||++ ++
T Consensus 170 ra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~G-----------fYdGt~FHRV-~gFmIQgGDp~-g~ 236 (369)
T 3rfy_A 170 RASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERH-----------FYDGMEIQRS-DGFVVQTGDPE-GP 236 (369)
T ss_dssp EEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTT-----------TTTTEECEEE-EEEEECCCCCC-CC
T ss_pred CeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcC-----------CcCCCeeeee-CCeeEecCCCC-CC
Confidence 456777777654 36999999999999999999999999987 9999999999 99999999997 56
Q ss_pred CCC---------------------CCccCCCCCCCCcc-----ccCCCCceEEEeecC--CCCCCCcceEEec-------
Q 018098 80 GTG---------------------GESIYGLKFEDENF-----ELKHERKGMLSMANA--GPNTNGSQFFITT------- 124 (361)
Q Consensus 80 ~~~---------------------~~~~~~~~~~~e~~-----~~~~~~~g~l~~~~~--~~~~~~sqF~I~~------- 124 (361)
|+| +.++|+.+|++|++ .++|+.+|+|||||. +|||+||||||++
T Consensus 237 G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~ 316 (369)
T 3rfy_A 237 AEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTP 316 (369)
T ss_dssp CSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECS
T ss_pred CCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCC
Confidence 665 46789999999865 688999999999998 7999999999999
Q ss_pred CCCCCCCCCceEEeEEEeChHHHHHHhc
Q 018098 125 TRTSHLDGKHVVFGRVIKGMGVVRSIEH 152 (361)
Q Consensus 125 ~~~~~ld~~~~vfG~V~~g~~vl~~i~~ 152 (361)
.+.++||++|+|||+|++||++|++|++
T Consensus 317 ~~~~~LDgkytVFG~VveGmdVVdkI~~ 344 (369)
T 3rfy_A 317 SNSNILDGRYAVFGYVTDNEDFLADLKV 344 (369)
T ss_dssp CCCSSSCSCEEEEEEEEESTTGGGGCCT
T ss_pred CCCcccCCCeeEEEEEecCHHHHHHHhC
Confidence 4789999999999999999999999987
No 37
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.92 E-value=1.1e-24 Score=181.01 Aligned_cols=157 Identities=29% Similarity=0.447 Sum_probs=135.9
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL 284 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al 284 (361)
.++.++.+..++..|+.+++.|+|++|+..|++|++++........+..+.....+|....+|.|+|.||+++|+|++|+
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~ 83 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAE 83 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHH
Confidence 44566789999999999999999999999999999987665554555555555678999999999999999999999999
Q ss_pred HHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 018098 285 LDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG-GIKKELAVAKKKIHERREQEKKQYRKMFQ 361 (361)
Q Consensus 285 ~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~-~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 361 (361)
.+|+++|+++|+++++|+++|.+|..+|++++|+.+|+++++++|+++ .+...+..+...+++.++++++.|++||+
T Consensus 84 ~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 84 ETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999 88999999999999999999999999995
No 38
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.86 E-value=1.9e-21 Score=155.00 Aligned_cols=114 Identities=25% Similarity=0.446 Sum_probs=110.3
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
+.++.++++|+.+++.|+|++|+..|+++++ ++|.+..+|.++|.||.++|++++|+.+|++
T Consensus 11 ~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 72 (126)
T 4gco_A 11 ELAQEEKNKGNEYFKKGDYPTAMRHYNEAVK------------------RDPENAILYSNRAACLTKLMEFQRALDDCDT 72 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHhhHHHhhccHHHHHHHHHH
Confidence 4688999999999999999999999999999 8889999999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
+|+++|+++++|+++|.++..+|++++|+.+|+++++++|++..++..++.+
T Consensus 73 al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 73 CIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999988876
No 39
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.86 E-value=2e-21 Score=159.38 Aligned_cols=138 Identities=14% Similarity=0.072 Sum_probs=122.5
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDT 287 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~ 287 (361)
....+..+++.|+.+++.|+|++|+.+|++||++.+.....+ .....|.+..+|+|+|.|+.++|+|++|+.+|
T Consensus 7 ~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~------a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~ 80 (159)
T 2hr2_A 7 EVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEE------AFDHAGFDAFCHAGLAEALAGLRSFDEALHSA 80 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTS------CCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchh------hhhhccchHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 355789999999999999999999999999999776522211 11256677789999999999999999999999
Q ss_pred HHHhhc-------CCCchhhH----hHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 288 EFAMRD-------GDDNVKAL----FRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 288 ~~al~~-------~p~~~ka~----~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
++||++ +|++.++| |++|.++..+|++++|+.+|+++++++|++..+...+..++..+++..++
T Consensus 81 ~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 81 DKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999 99999999999999999999999999999999999999998888877654
No 40
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.82 E-value=8.2e-20 Score=177.21 Aligned_cols=158 Identities=24% Similarity=0.401 Sum_probs=137.1
Q ss_pred CcCchHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCCh
Q 018098 201 TPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL 280 (361)
Q Consensus 201 ~~~~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~ 280 (361)
+..........+..++.+|+.+++.|+|++|+.+|++|+++.+.... ...+......+....+|+|+|.||+++++|
T Consensus 257 ~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~---~~~~~~~~~~~~~~~~~~nla~~~~~~g~~ 333 (457)
T 1kt0_A 257 WEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYG---LSEKESKASESFLLAAFLNLAMCYLKLREY 333 (457)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCS---CCHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccc---CChHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 45567777888999999999999999999999999999996553311 223344456777789999999999999999
Q ss_pred HHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018098 281 KGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKKQYRKMF 360 (361)
Q Consensus 281 ~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 360 (361)
++|+.+|++||+++|+++++|+++|.+|..+|++++|+.+|+++++++|++..++..++.+...+++.++++++.|++||
T Consensus 334 ~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~f 413 (457)
T 1kt0_A 334 TKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMF 413 (457)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 018098 361 Q 361 (361)
Q Consensus 361 ~ 361 (361)
+
T Consensus 414 ~ 414 (457)
T 1kt0_A 414 K 414 (457)
T ss_dssp -
T ss_pred h
Confidence 4
No 41
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.82 E-value=1.4e-19 Score=154.93 Aligned_cols=165 Identities=25% Similarity=0.291 Sum_probs=130.2
Q ss_pred CCCCCCCCcCchHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCcc-chhHHHHHHHHHHHHHHH
Q 018098 194 WPADLDQTPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEG-KSSSLRKTKSQIFTNSSA 272 (361)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~nla~ 272 (361)
+....+.+..+.++....+..+..+|+.++..|+|++|+..|.+++++.+..... ... ...........++.++|.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~---~~~~~~~~~~~~~~~~~~~la~ 96 (198)
T 2fbn_A 20 QGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEW---DDQILLDKKKNIEISCNLNLAT 96 (198)
T ss_dssp --CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccccc---chhhHHHHHHHHHHHHHHHHHH
Confidence 3344444667788889999999999999999999999999999999855421100 000 111122334588999999
Q ss_pred HHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 273 CKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 273 ~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
||.++|+|++|+.+|++++.++|.++++++++|.++..+|++++|+..|+++++++|++..++..++.+...+++.++++
T Consensus 97 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 97 CYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcC
Q 018098 353 KKQYRKMFQ 361 (361)
Q Consensus 353 k~~~~~~f~ 361 (361)
++.|++||+
T Consensus 177 ~~~~~~~f~ 185 (198)
T 2fbn_A 177 KLTFGGMFD 185 (198)
T ss_dssp ---------
T ss_pred HHHHHHHhc
Confidence 999999985
No 42
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.81 E-value=3.6e-19 Score=165.79 Aligned_cols=158 Identities=28% Similarity=0.404 Sum_probs=141.4
Q ss_pred CcCchHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCCh
Q 018098 201 TPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL 280 (361)
Q Consensus 201 ~~~~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~ 280 (361)
+....+.....+..+..+|+.+++.|+|++|+.+|++|+++.+.... ...+......+....+|+|+|.||.++|+|
T Consensus 136 ~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~---~~~~~~~~~~~~~~~~~~nla~~~~~~g~~ 212 (336)
T 1p5q_A 136 WEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESS---FSNEEAQKAQALRLASHLNLAMCHLKLQAF 212 (336)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCC---CCSHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcccc---CChHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 34456667778999999999999999999999999999996643211 122334456777889999999999999999
Q ss_pred HHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 018098 281 KGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKKQYRKMF 360 (361)
Q Consensus 281 ~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f 360 (361)
++|+.+|++||+++|+++++++++|.+|..+|++++|+.+|+++++++|++..++..++.+...+++.++++++.|++||
T Consensus 213 ~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 213 SAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C
Q 018098 361 Q 361 (361)
Q Consensus 361 ~ 361 (361)
+
T Consensus 293 ~ 293 (336)
T 1p5q_A 293 E 293 (336)
T ss_dssp H
T ss_pred H
Confidence 3
No 43
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.78 E-value=8.2e-19 Score=139.80 Aligned_cols=115 Identities=26% Similarity=0.353 Sum_probs=103.9
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDT 287 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~ 287 (361)
..+.|.+++++|+.+++.|+|++|+.+|++|++ ++|.+..+|.|+|.||.++|+|++|+.+|
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~------------------~~p~~~~~~~nlg~~~~~~~~~~~A~~~~ 65 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIE------------------LDPSNITFYNNKAAVYFEEKKFAECVQFC 65 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHhHHHHHHHhhhHHHHHHHH
Confidence 345788999999999999999999999999999 88889999999999999999999999999
Q ss_pred HHHhhcCCCc-------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 288 EFAMRDGDDN-------VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 288 ~~al~~~p~~-------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
+++|+++|++ .++|+++|.++..+|++++|+.+|+++++++| ++++...+.++
T Consensus 66 ~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~-~~~~~~~l~~l 125 (127)
T 4gcn_A 66 EKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR-DPELVKKVKEL 125 (127)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC-CHHHHHHHHHH
T ss_pred HHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCc-CHHHHHHHHHh
Confidence 9999999876 46899999999999999999999999999998 45555555544
No 44
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.78 E-value=3.7e-19 Score=165.80 Aligned_cols=163 Identities=25% Similarity=0.387 Sum_probs=104.6
Q ss_pred CCCCcCchHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc
Q 018098 198 LDQTPNELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL 277 (361)
Q Consensus 198 ~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l 277 (361)
...+....++.+..+..++.+|+.+++.|+|++|+.+|++|+++.+...... ...............+|+|+|.||+++
T Consensus 165 ~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~-~~~~~~~~~~~l~~~~~~nla~~~~~~ 243 (338)
T 2if4_A 165 KARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQ-LYGKYQDMALAVKNPCHLNIAACLIKL 243 (338)
T ss_dssp BTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHT-CCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhh-hcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3446677888999999999999999999999999999999998543211000 000000111222335899999999999
Q ss_pred CChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018098 278 GDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKKQYR 357 (361)
Q Consensus 278 ~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~ 357 (361)
++|++|+.+|+++|+++|+++++|+++|.+|..+|++++|+.+|+++++++|++..++..+..+........+++++.|+
T Consensus 244 g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~ 323 (338)
T 2if4_A 244 KRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYK 323 (338)
T ss_dssp TCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-------------------------------
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888889999999
Q ss_pred hhcC
Q 018098 358 KMFQ 361 (361)
Q Consensus 358 ~~f~ 361 (361)
+||+
T Consensus 324 ~~l~ 327 (338)
T 2if4_A 324 GIFK 327 (338)
T ss_dssp ----
T ss_pred HhhC
Confidence 9884
No 45
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=2.6e-18 Score=135.85 Aligned_cols=117 Identities=20% Similarity=0.314 Sum_probs=111.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|+.+++.|+|++|+..|+++++ ++|.+..+|.++|.|+.++|+|++|+.+++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 64 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIK------------------RAPEDARGYSNRAAALAKLMSFPEAIADCNKA 64 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 578899999999999999999999999999 78888899999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE------PNDGGIKKELAVAKKKI 345 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~------P~~~~~~~~l~~~~~~~ 345 (361)
++++|+++.+++++|.++..+|++++|+..|+++++++ |++..++..+..+...+
T Consensus 65 l~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 65 IEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999 99999999998887654
No 46
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.74 E-value=1.9e-17 Score=137.20 Aligned_cols=123 Identities=28% Similarity=0.384 Sum_probs=113.0
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+.+|+++++ ++|.+..+|.++|.||.++|+|++|+.++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 70 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALS------------------IAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCcCHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3678899999999999999999999999999 7888899999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG--IKKELAVAKKKIHERRE 350 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~--~~~~l~~~~~~~~~~~~ 350 (361)
+++++|+++.+|+++|.++..+|++++|+.+|+++++++|++.. +...+..++.++++..+
T Consensus 71 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~ 133 (164)
T 3sz7_A 71 ATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSDAMKRGLETTKRKIEEANR 133 (164)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999887 56666666666666544
No 47
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.74 E-value=2.2e-17 Score=135.67 Aligned_cols=104 Identities=17% Similarity=0.152 Sum_probs=100.8
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+++.|+|++|+..|++++. ++|.+..+|.++|.||..+|+|++|+..|++|
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~------------------~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCI------------------YDFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 577899999999999999999999999999 89999999999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG 332 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~ 332 (361)
++++|+++.+|+++|.+|..+|++++|+..|++++++.|+.+
T Consensus 97 l~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 97 FALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 999999999999999999999999999999999999999765
No 48
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.72 E-value=5e-17 Score=131.61 Aligned_cols=123 Identities=17% Similarity=0.245 Sum_probs=115.1
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|++++. .+|.+..+|.++|.|+..+|+|++|+..++++
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 78 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCM------------------LDHYDARYFLGLGACRQSLGLYEQALQSYSYG 78 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 467789999999999999999999999999 88889999999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
+.++|+++.+++.+|.++..+|++++|+..|+++++++|+++........+...++..+++
T Consensus 79 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~~~ 139 (142)
T 2xcb_A 79 ALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTAR 139 (142)
T ss_dssp HHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998888888887777766544
No 49
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.72 E-value=4.2e-17 Score=133.40 Aligned_cols=123 Identities=12% Similarity=0.183 Sum_probs=112.1
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+..|++++. .+|.+..+|.++|.|+..+|+|++|+..|++
T Consensus 19 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 80 (148)
T 2vgx_A 19 DTLEQLYSLAFNQYQSGXYEDAHXVFQALCV------------------LDHYDSRFFLGLGACRQAMGQYDLAIHSYSY 80 (148)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCChHHHHHHHHHHHH------------------cCcccHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3577889999999999999999999999999 8888999999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERRE 350 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 350 (361)
++.++|+++.+++++|.++..+|++++|+..|+++++++|+++........+...++..+.
T Consensus 81 al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~~l~~ 141 (148)
T 2vgx_A 81 GAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLEAIKL 141 (148)
T ss_dssp HHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHC--
T ss_pred HHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999988877777777666655433
No 50
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.71 E-value=3.3e-17 Score=134.25 Aligned_cols=115 Identities=10% Similarity=0.027 Sum_probs=99.3
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+++.|+|++|+++|+++++ ++|.+..+|.++|.||.++|++++|+..++++
T Consensus 30 ~~~~~~~la~~y~~~~~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~a 91 (150)
T 4ga2_A 30 KSIKGFYFAKLYYEAKEYDLAKKYICTYIN------------------VQERDPKAHRFLGLLYELEENTDKAVECYRRS 91 (150)
T ss_dssp HHTTHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCchHHHHHHHHHH
Confidence 456678889999999999999999999998 88888889999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHH-HHHHHHhCCCCHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVES-FEKALKLEPNDGGIKKELAVAKK 343 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~-~~~al~l~P~~~~~~~~l~~~~~ 343 (361)
++++|+++.+++++|.++..+|++++|+.. +++|++++|+++.++..++.+..
T Consensus 92 l~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~ll~ 145 (150)
T 4ga2_A 92 VELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQLLD 145 (150)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 999999999999999999999998877765 58899999999888887776644
No 51
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.71 E-value=3.4e-17 Score=134.21 Aligned_cols=119 Identities=16% Similarity=0.073 Sum_probs=107.9
Q ss_pred hcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCc
Q 018098 218 FGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (361)
Q Consensus 218 ~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~ 297 (361)
+|..+..+|++++|++.|++++. .+|.....++++|.+|.++|+|++|+.+++++|+++|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~------------------~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~ 64 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTP------------------SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERD 64 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSC------------------SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHcChHHHHHHHHHHhcc------------------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 68888999999999999999998 888999999999999999999999999999999999999
Q ss_pred hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 298 VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 298 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
+.+|+.+|.+|..+|++++|+..|+++++++|++..++..++.+...+++..++.+.
T Consensus 65 ~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~ 121 (150)
T 4ga2_A 65 PKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKY 121 (150)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHH
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHH
Confidence 999999999999999999999999999999999999999999998887765544433
No 52
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.69 E-value=1.1e-16 Score=127.69 Aligned_cols=123 Identities=27% Similarity=0.372 Sum_probs=114.0
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|++++. .+|....++.++|.|+..+|++++|+.+++++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAIT------------------RNPLVAVYYTNRALCYLKMQQPEQALADCRRA 69 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHh------------------hCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 477899999999999999999999999999 77788899999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC-----CHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN-----DGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~-----~~~~~~~l~~~~~~~~~~~~~ 351 (361)
++++|+++.+++++|.++..+|++++|+..|+++++++|+ +..+...+..+.......+++
T Consensus 70 l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~e~ 135 (137)
T 3q49_B 70 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEE 135 (137)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998 788888888887776655443
No 53
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.68 E-value=1.2e-15 Score=131.68 Aligned_cols=119 Identities=16% Similarity=0.128 Sum_probs=111.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHH----------------HHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTN----------------SSACK 274 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n----------------la~~~ 274 (361)
.+..+...|..++..|+|++|+..|+++++ .+|.+..+|++ +|.+|
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~ 64 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIA------------------LNIDRTEMYYWTNVDKNSEISSKLATELALAY 64 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCCChHHHHHhhhcchhhhhHHHHHHHHHHH
Confidence 356788899999999999999999999999 88888888888 99999
Q ss_pred HhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 275 LKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 275 ~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
.++|++++|+..++++++++|+++.+++.+|.++..+|++++|+.+|+++++++|++..++..++.+.....+
T Consensus 65 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 65 KKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988755543
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.66 E-value=4.1e-16 Score=158.71 Aligned_cols=125 Identities=22% Similarity=0.292 Sum_probs=92.7
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..++++.++|+.+.+.|+|++|+.+|++|++ ++|....+|+|+|.+|.++|++++|+.+|++
T Consensus 7 ~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~------------------l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~ 68 (723)
T 4gyw_A 7 THADSLNNLANIKREQGNIEEAVRLYRKALE------------------VFPEFAAAHSNLASVLQQQGKLQEALMHYKE 68 (723)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3577788888888888888888888888887 6666677777777777777777777777777
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
||+++|+++.+|+++|.++..+|++++|++.|++|++++|++..++..++.+...+++.+++.
T Consensus 69 Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi 131 (723)
T 4gyw_A 69 AIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAI 131 (723)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 777777777777777777777777777777777777777777777777777766666655544
No 55
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.64 E-value=1.8e-15 Score=116.43 Aligned_cols=115 Identities=27% Similarity=0.306 Sum_probs=108.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+...|..++..|+|++|+..|++++. ..|....++.++|.++..+|++++|+..++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 64 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIK------------------LDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKT 64 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHH------------------HCCCcHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 567899999999999999999999999998 66777889999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKK 343 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 343 (361)
+.++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+..
T Consensus 65 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 65 VDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999988887753
No 56
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.63 E-value=8e-15 Score=120.28 Aligned_cols=119 Identities=24% Similarity=0.360 Sum_probs=110.9
Q ss_pred HHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHH
Q 018098 206 SWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALL 285 (361)
Q Consensus 206 ~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~ 285 (361)
....+.+..+..+|..++..|+|++|+..|+++++ ..|....++.++|.++..+|+|++|+.
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~ 68 (166)
T 1a17_A 7 DGALKRAEELKTQANDYFKAKDYENAIKFYSQAIE------------------LNPSNAIYYGNRSLAYLRTECYGYALG 68 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH------------------hCCCChHHHHHHHHHHHHcCCHHHHHH
Confidence 45566889999999999999999999999999998 677778899999999999999999999
Q ss_pred HHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 286 DTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 286 ~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
.++++++++|.++.+++++|.++..+|++++|+..|+++++++|.+..++..+..+.
T Consensus 69 ~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~ 125 (166)
T 1a17_A 69 DATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECN 125 (166)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998886666663
No 57
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.63 E-value=1.3e-15 Score=132.45 Aligned_cols=122 Identities=18% Similarity=0.242 Sum_probs=73.8
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..+++.|+|++|+..|+++++ .+|.+..++.++|.++..+|++++|+..+++++
T Consensus 5 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al 66 (217)
T 2pl2_A 5 EQNPLRLGVQLYALGRYDAALTLFERALK------------------ENPQDPEALYWLARTQLKLGLVNPALENGKTLV 66 (217)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHT------------------TSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44556666666666666666666666666 555555566666666666666666666666666
Q ss_pred hcCCCchhhHhHHHHHHHhc-----------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDNVKALFRQGQAYMAL-----------NDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l-----------~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
+++|+++.+++.+|.++..+ |++++|+..|+++++++|++..++..++.+...+++.+++
T Consensus 67 ~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A 137 (217)
T 2pl2_A 67 ARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKA 137 (217)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHH
Confidence 66666666666666666666 6666666666666666666666665555555555444433
No 58
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.62 E-value=5.1e-15 Score=115.89 Aligned_cols=122 Identities=33% Similarity=0.422 Sum_probs=113.5
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDT 287 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~ 287 (361)
....+..+..+|..++..|+|++|+..|++++. ..|....++.++|.++..+|++++|+..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~ 69 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIE------------------LNPANAVYFCNRAAAYSKLGNYAGAVQDC 69 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHH------------------cCCCCHHHHHHHHHHHHHhhchHHHHHHH
Confidence 345688999999999999999999999999998 66667889999999999999999999999
Q ss_pred HHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 288 EFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 288 ~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
.+++.++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+...+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 70 ERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999888776643
No 59
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.61 E-value=1.4e-15 Score=154.73 Aligned_cols=125 Identities=18% Similarity=0.197 Sum_probs=117.8
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
+.+..+.++|+.+.+.|+|++|+.+|++|++ ++|....+|+|+|.++.++|++++|++.|++
T Consensus 41 ~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~------------------l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~k 102 (723)
T 4gyw_A 41 EFAAAHSNLASVLQQQGKLQEALMHYKEAIR------------------ISPTFADAYSNMGNTLKEMQDVQGALQCYTR 102 (723)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3578899999999999999999999999999 8899999999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
||+++|+++.+|+++|.+|..+|++++|++.|++|++++|++..++..++.+...+.+.+++.
T Consensus 103 Al~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~ 165 (723)
T 4gyw_A 103 AIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYD 165 (723)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHH
Confidence 999999999999999999999999999999999999999999999999999988876655443
No 60
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.61 E-value=1.3e-15 Score=120.02 Aligned_cols=103 Identities=10% Similarity=0.018 Sum_probs=92.8
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+..+|..+++.|++++|+..|+++++ .+|.+..+|+++|.++..+|++++|+..++++++
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQ------------------KEPEREEAWRSLGLTQAENEKDGLAIIALNHARM 79 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3577889999999999999999999999 8899999999999999999999999999999999
Q ss_pred cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 018098 293 DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG 333 (361)
Q Consensus 293 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~ 333 (361)
++|+++.+++.+|.++..+|++++|+..|+++++++|++..
T Consensus 80 l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 80 LDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCCC
Confidence 99999999999999999999999999999999999998753
No 61
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.61 E-value=3.1e-15 Score=117.91 Aligned_cols=117 Identities=25% Similarity=0.354 Sum_probs=109.4
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|+++++ ..|....++.++|.++..++++++|+..++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 76 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIK------------------RNPKDAKLYSNRAACYTKLLEFQLALKDCEEC 76 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHT------------------TCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------cCCCcHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 577899999999999999999999999998 56666789999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKI 345 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 345 (361)
++++|.++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....
T Consensus 77 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~ 131 (133)
T 2lni_A 77 IQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQ 131 (133)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHHHH
T ss_pred HHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998888876543
No 62
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=6.2e-15 Score=118.58 Aligned_cols=117 Identities=31% Similarity=0.454 Sum_probs=106.0
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+...|..++..|+|++|+..|+++++..+ .++....++.++|.+|..+++|++|+..++++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~---------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 91 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDA---------------TPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCC---------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcc---------------cchHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 467889999999999999999999999998221 11224789999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
+.++|+++.+++++|.++..+|++++|+..|+++++++|++..++..+..+.
T Consensus 92 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988887774
No 63
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.60 E-value=5.2e-15 Score=116.01 Aligned_cols=120 Identities=29% Similarity=0.380 Sum_probs=110.3
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|++++. ..|....++.++|.++..+|++++|+.+++++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 64 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKE------------------LDPTNMTYITNQAAVYFEKGDYNKCRELCEKA 64 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh------------------cCCccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 577899999999999999999999999998 66677889999999999999999999999999
Q ss_pred hhcCCCc-------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDN-------VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 291 l~~~p~~-------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 349 (361)
+.++|.+ ..+++++|.++..+|++++|+..|++++++.| ++.+...+..+...+++.+
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~ 129 (131)
T 1elr_A 65 IEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQE 129 (131)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC-
T ss_pred HhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHhh
Confidence 9999887 89999999999999999999999999999999 6888999988888776643
No 64
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.60 E-value=1e-14 Score=127.01 Aligned_cols=124 Identities=17% Similarity=0.252 Sum_probs=110.3
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHH-HHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK-TKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
+..+...|..++..|+|++|+..|+++++ +.| .+..+++++|.|+..+|++++|+.+++++
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 68 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLK------------------LTNNQDSVTAYNCGVCADNIKKYKEAADYFDIA 68 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh------------------ccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHH
Confidence 46789999999999999999999999999 555 56678899999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-------HHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG-------GIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~-------~~~~~l~~~~~~~~~~~~~~k 353 (361)
++++|+++.+++.+|.++..+|++++|+..|+++++++|++. .++..++.+...+++.+++..
T Consensus 69 l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~ 138 (228)
T 4i17_A 69 IKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEE 138 (228)
T ss_dssp HHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHH
Confidence 999999999999999999999999999999999999999999 446666666666655555443
No 65
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.60 E-value=3.8e-15 Score=121.72 Aligned_cols=108 Identities=17% Similarity=0.209 Sum_probs=98.4
Q ss_pred hHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCCh----------HHHHHHHHHHh
Q 018098 222 HYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL----------KGALLDTEFAM 291 (361)
Q Consensus 222 ~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~----------~~Al~~~~~al 291 (361)
.-+.++|++|+..|+++++ ++|.+..+|+|+|.++..++++ ++|+..|++||
T Consensus 12 ~~r~~~feeA~~~~~~Ai~------------------l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL 73 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYK------------------SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEAL 73 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHH
Confidence 3457899999999999999 9999999999999999999876 59999999999
Q ss_pred hcCCCchhhHhHHHHHHHhcC-----------CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDNVKALFRQGQAYMALN-----------DVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l~-----------~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
+++|++..+|+++|.+|..+| ++++|+.+|++|++++|++...++.+..+...-+-
T Consensus 74 ~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~el 140 (158)
T 1zu2_A 74 LIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQL 140 (158)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHH
T ss_pred HhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHhc
Confidence 999999999999999999885 89999999999999999999998888877655443
No 66
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.59 E-value=1.4e-14 Score=121.71 Aligned_cols=126 Identities=19% Similarity=0.273 Sum_probs=95.1
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCCh----------
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL---------- 280 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~---------- 280 (361)
.+..+.++|+.++..|+|++|+..|+++++ ++|.+..++.++|.+|.++|++
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~ 65 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLK------------------ADPNNVETLLKLGKTYMDIGLPNDAIESLKKF 65 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 467899999999999999999999999998 4444555555555555555555
Q ss_pred ------------------------HHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHH
Q 018098 281 ------------------------KGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKK 336 (361)
Q Consensus 281 ------------------------~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~ 336 (361)
+.|+..+.+++.++|.+..+++.+|.++..+|++++|+..|+++++++|.+..++.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~ 145 (184)
T 3vtx_A 66 VVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQ 145 (184)
T ss_dssp HHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHH
Confidence 45555555555667777778888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018098 337 ELAVAKKKIHERREQEKK 354 (361)
Q Consensus 337 ~l~~~~~~~~~~~~~~k~ 354 (361)
.++.+...+++.+++.+.
T Consensus 146 ~lg~~~~~~g~~~~A~~~ 163 (184)
T 3vtx_A 146 SIGLAYEGKGLRDEAVKY 163 (184)
T ss_dssp HHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHH
Confidence 888888877777665443
No 67
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.59 E-value=4.1e-15 Score=140.63 Aligned_cols=86 Identities=10% Similarity=0.030 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
++|.+..+|+++|.++..+|++++|+..|++||+++|++..+|+++|.++..+|++++|+.+|+++++++|++..++..+
T Consensus 161 l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~l 240 (382)
T 2h6f_A 161 EQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 44444455555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHHH
Q 018098 339 AVAKKK 344 (361)
Q Consensus 339 ~~~~~~ 344 (361)
+.+...
T Consensus 241 g~~l~~ 246 (382)
T 2h6f_A 241 YFVISN 246 (382)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555444
No 68
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.58 E-value=1.2e-14 Score=126.33 Aligned_cols=123 Identities=20% Similarity=0.138 Sum_probs=104.5
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc-----------CC
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL-----------GD 279 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-----------~~ 279 (361)
.+..+..+|..+.+.|++++|+..|+++++ ++|.+..++.++|.++..+ |+
T Consensus 38 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~ 99 (217)
T 2pl2_A 38 DPEALYWLARTQLKLGLVNPALENGKTLVA------------------RTPRYLGGYMVLSEAYVALYRQAEDRERGKGY 99 (217)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHhhhhhhhhcccccC
Confidence 467889999999999999999999999999 7777788888888888888 88
Q ss_pred hHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 280 LKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 280 ~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++ +++.++..++.+...+++.+++.
T Consensus 100 ~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~ 171 (217)
T 2pl2_A 100 LEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEAL 171 (217)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHH
Confidence 8888888888888888888888888888888888888888888888888 78888888888877777666554
No 69
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.58 E-value=1.1e-14 Score=114.71 Aligned_cols=114 Identities=9% Similarity=0.017 Sum_probs=101.9
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHH---HHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKS---QIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+|..++..|+|++|+..|+++++ ..|... .++.++|.++.++|+|++|+..+++
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~------------------~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 64 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLE------------------LYPNGVYTPNALYWLGESYYATRNFQLAEAQFRD 64 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH------------------HCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4567889999999999999999999998 333333 7899999999999999999999999
Q ss_pred HhhcCCCc---hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 290 AMRDGDDN---VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 290 al~~~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
++..+|++ +.+++.+|.++..+|++++|+..|+++++..|+++.+...+..+...
T Consensus 65 ~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~l 122 (129)
T 2xev_A 65 LVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQERLQSI 122 (129)
T ss_dssp HHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHH
T ss_pred HHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHHHHHH
Confidence 99999999 88999999999999999999999999999999998887776666543
No 70
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.57 E-value=4.2e-15 Score=140.54 Aligned_cols=126 Identities=10% Similarity=0.049 Sum_probs=117.8
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD-LKGALLDT 287 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~-~~~Al~~~ 287 (361)
...+..+..+|..+.+.|+|++|+..|+++|+ ++|.+..+|+++|.++..+|+ +++|+.+|
T Consensus 94 p~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~------------------l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~ 155 (382)
T 2h6f_A 94 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIE------------------LNAANYTVWHFRRVLLKSLQKDLHEEMNYI 155 (382)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHCCChHHHHHHHHHHHH------------------hCccCHHHHHHHHHHHHHcccCHHHHHHHH
Confidence 34578899999999999999999999999999 899999999999999999997 99999999
Q ss_pred HHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 288 EFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 288 ~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
++||+++|++..+|+++|.++..+|++++|+.+|+++++++|++..++..++.+...+++.+++.
T Consensus 156 ~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl 220 (382)
T 2h6f_A 156 TAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNEL 220 (382)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHH
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999998887665543
No 71
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.56 E-value=9.8e-15 Score=113.87 Aligned_cols=100 Identities=14% Similarity=0.060 Sum_probs=89.1
Q ss_pred HhhhHHHHHHHHHHHHhhhccccccCCCCccchhHH---HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhh
Q 018098 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSL---RKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKA 300 (361)
Q Consensus 224 ~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka 300 (361)
..|+|++|+..|+++++ + +|....++.++|.+|..+|+|++|+..++++++++|+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~------------------~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 63 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIA------------------SGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQAL 63 (117)
T ss_dssp -----CCCHHHHHHHHS------------------SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred CCCcHHHHHHHHHHHHH------------------cCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHH
Confidence 36899999999999998 6 78899999999999999999999999999999999999999
Q ss_pred HhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 301 LFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 301 ~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
++++|.++..+|++++|+..|++++++.|+++.+......+
T Consensus 64 ~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~ai 104 (117)
T 3k9i_A 64 RVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYKQAI 104 (117)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999998876544433
No 72
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.55 E-value=8.9e-15 Score=142.46 Aligned_cols=118 Identities=25% Similarity=0.387 Sum_probs=111.0
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
+.+..+..+|+.+++.|+|++|++.|++|++ ++|....+|.++|.+|.++|+|++|+.++++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 65 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIE------------------LNPSNAIYYGNRSLAYLRTECYGYALGDATR 65 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 4577889999999999999999999999999 7788899999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKI 345 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 345 (361)
|++++|+++.+++++|.+|..+|++++|++.|+++++++|++..++..++.+...+
T Consensus 66 al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~ 121 (477)
T 1wao_1 66 AIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIV 121 (477)
T ss_dssp HHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988884333
No 73
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.55 E-value=2.7e-14 Score=129.31 Aligned_cols=103 Identities=25% Similarity=0.373 Sum_probs=98.9
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..++.+|+.++..|+|++|+..|++++. .+|.+..++.++|.+|.++|+|++|+.+++++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~a 64 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAIT------------------RNPLVAVYYTNRALCYLKMQQPEQALADCRRA 64 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 467889999999999999999999999999 77888899999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND 331 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~ 331 (361)
++++|+++++++++|.++..+|++++|+..|+++++++|++
T Consensus 65 l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 65 LELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999999976
No 74
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.54 E-value=1.1e-14 Score=119.53 Aligned_cols=97 Identities=11% Similarity=0.017 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
++|.+..+++++|.++.++|+|++|+..|++++.++|.++.+|+.+|.++..+|+|++|+..|+++++++|+++.++..+
T Consensus 31 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~l 110 (151)
T 3gyz_A 31 IPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHT 110 (151)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 018098 339 AVAKKKIHERREQEKKQ 355 (361)
Q Consensus 339 ~~~~~~~~~~~~~~k~~ 355 (361)
+.+...+++.+++.+..
T Consensus 111 g~~~~~lg~~~eA~~~~ 127 (151)
T 3gyz_A 111 GQCQLRLKAPLKAKECF 127 (151)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHH
Confidence 99999998887766443
No 75
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.54 E-value=1.3e-13 Score=106.91 Aligned_cols=116 Identities=33% Similarity=0.493 Sum_probs=107.7
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|+++++ ..|....++.++|.++...|++++|+..++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 69 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALE------------------LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 69 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------HCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 366788999999999999999999999998 55666778999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
+.++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.+...
T Consensus 70 ~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~ 123 (125)
T 1na0_A 70 LELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQK 123 (125)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888887654
No 76
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.52 E-value=1.2e-13 Score=115.93 Aligned_cols=123 Identities=17% Similarity=0.137 Sum_probs=96.5
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccc-----------cCCCCc-----cchhHHHHHHHHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE-----------KEGIDE-----GKSSSLRKTKSQIFTNSSACK 274 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~nla~~~ 274 (361)
.+..+..+|..+++.|++++|+..+.+++...+.... ...... .......|....++..+|.+|
T Consensus 38 ~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~ 117 (184)
T 3vtx_A 38 NVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVY 117 (184)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 4566777777888888888888887777764432100 000000 001235677788999999999
Q ss_pred HhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 018098 275 LKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG 333 (361)
Q Consensus 275 ~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~ 333 (361)
.++|++++|+..++++++++|.++.+++++|.+|..+|++++|+.+|++|++++|+++.
T Consensus 118 ~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 118 DSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHHHH
T ss_pred HHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccCHH
Confidence 99999999999999999999999999999999999999999999999999999997643
No 77
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.51 E-value=1e-13 Score=109.85 Aligned_cols=96 Identities=14% Similarity=0.113 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
++|..+..+.++|.+|++.|+|++|+..|++||+++|.++.+|+++|.++..+|++++|+.+|+++++++|++..++..+
T Consensus 8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018098 339 AVAKKKIHERREQEKK 354 (361)
Q Consensus 339 ~~~~~~~~~~~~~~k~ 354 (361)
+.+...+++.+++.+.
T Consensus 88 g~~~~~~~~~~~A~~~ 103 (126)
T 4gco_A 88 AACLVAMREWSKAQRA 103 (126)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHH
Confidence 9999999888776544
No 78
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.51 E-value=1.7e-13 Score=119.11 Aligned_cols=119 Identities=13% Similarity=0.120 Sum_probs=110.9
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
...+..+|..++..|+|++|+..|+++++ .+|....++.++|.+|..+|++++|+..+++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 103 (228)
T 4i17_A 42 SVTAYNCGVCADNIKKYKEAADYFDIAIK------------------KNYNLANAYIGKSAAYRDMKNNQEYIATLTEGI 103 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------TTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhcHHHHHHHHHHHHH------------------hCcchHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 35677799999999999999999999998 788889999999999999999999999999999
Q ss_pred hcCCCch-------hhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDNV-------KALFRQGQAYMALNDVDAAVESFEKALKLEPN--DGGIKKELAVAKKKIHER 348 (361)
Q Consensus 292 ~~~p~~~-------ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~~~~~ 348 (361)
+++|++. .+|+.+|.++..+|++++|+..|+++++++|+ +..++..++.+.......
T Consensus 104 ~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 104 KAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999998 77999999999999999999999999999999 899999999988766655
No 79
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.50 E-value=1.4e-13 Score=118.65 Aligned_cols=105 Identities=20% Similarity=0.194 Sum_probs=92.9
Q ss_pred hcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCc
Q 018098 218 FGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (361)
Q Consensus 218 ~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~ 297 (361)
+|..+++.|+|++|+..|+++++ ++|.+..++.++|.++..+|++++|+..|+++++++|++
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQ------------------KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999 888999999999999999999999999999999999999
Q ss_pred hhhHhHHHHHHHh-----------------------------------cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 298 VKALFRQGQAYMA-----------------------------------LNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 298 ~ka~~~~a~a~~~-----------------------------------l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
+.+++++|.+|.. +|+|++|+.+|+++++++|++ .+...+..+
T Consensus 122 ~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~-~~~~~l~~i 199 (208)
T 3urz_A 122 LAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST-EAQKTLDKI 199 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH-HHHHHHHHH
Confidence 8888888777643 357889999999999999964 344445554
No 80
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.50 E-value=1.6e-13 Score=117.79 Aligned_cols=122 Identities=20% Similarity=0.174 Sum_probs=111.1
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|++++. . ...++.++|.+|..+|++++|+.+++++
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~------------------~---~~~~~~~lg~~~~~~g~~~~A~~~~~~a 63 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD------------------P---HSRICFNIGCMYTILKNMTEAEKAFTRS 63 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS------------------C---CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC------------------C---ChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 466788999999999999999999999864 1 2468999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG----------------GIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~----------------~~~~~l~~~~~~~~~~~~~~k 353 (361)
+.++|.++.+++++|.++..+|++++|+..|++++++.|.+. .++..++.+...+++.+++.+
T Consensus 64 l~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 142 (213)
T 1hh8_A 64 INRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEE 142 (213)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHH
Confidence 999999999999999999999999999999999999999877 899999999888887766554
No 81
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.49 E-value=3.6e-13 Score=112.40 Aligned_cols=114 Identities=15% Similarity=0.215 Sum_probs=105.1
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHH-HHhcCCh--HHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSAC-KLKLGDL--KGALLDT 287 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~-~~~l~~~--~~Al~~~ 287 (361)
.+..+..+|..++..|+|++|+..|++++. +.|.+..++.++|.+ +...|++ ++|+..+
T Consensus 43 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~ 104 (177)
T 2e2e_A 43 NSEQWALLGEYYLWQNDYSNSLLAYRQALQ------------------LRGENAELYAALATVLYYQASQHMTAQTRAMI 104 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------cCCCCHHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 567899999999999999999999999999 788888999999999 8899999 9999999
Q ss_pred HHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 288 EFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 288 ~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
+++++++|.+..+++.+|.++..+|++++|+..|+++++++|.+......+..+.
T Consensus 105 ~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~ 159 (177)
T 2e2e_A 105 DKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN 159 (177)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999876665554443
No 82
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.48 E-value=9.4e-14 Score=105.73 Aligned_cols=103 Identities=14% Similarity=0.121 Sum_probs=96.4
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..++..|+|++|+..|+++++ ..|....++.++|.++..+|++++|+..+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~ 67 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQ------------------LDPEESKYWLMKGKALYNLERYEEAVDCYNYVI 67 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHH------------------hCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 45678899999999999999999999998 666677889999999999999999999999999
Q ss_pred hcCCC--chhhHhHHHHHHHhc-CCHHHHHHHHHHHHHhCCCCH
Q 018098 292 RDGDD--NVKALFRQGQAYMAL-NDVDAAVESFEKALKLEPNDG 332 (361)
Q Consensus 292 ~~~p~--~~ka~~~~a~a~~~l-~~~~~A~~~~~~al~l~P~~~ 332 (361)
+++|. +..+++.+|.++..+ |++++|+++++++++.+|.+.
T Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 111 (112)
T 2kck_A 68 NVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHHH 111 (112)
T ss_dssp HTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCCC
T ss_pred HhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCCC
Confidence 99999 999999999999999 999999999999999999763
No 83
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.46 E-value=7.8e-13 Score=103.51 Aligned_cols=122 Identities=29% Similarity=0.376 Sum_probs=111.5
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+..+|..++..|++++|+..|++++. ..|....++.++|.++...|++++|+..+++++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 63 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALE------------------LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 63 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHH------------------cCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4677889999999999999999999998 5566677899999999999999999999999999
Q ss_pred cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 293 DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 293 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
.+|.+..+++.+|.++..+|++++|+..+++++++.|.+..++..++.+....++.+++.
T Consensus 64 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 123 (136)
T 2fo7_A 64 LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAI 123 (136)
T ss_dssp HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHH
Confidence 999999999999999999999999999999999999999999999998887777665554
No 84
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.46 E-value=3.7e-13 Score=133.55 Aligned_cols=126 Identities=11% Similarity=0.103 Sum_probs=117.1
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+..|+++++ ++|.+..++.++|.+|..+|++++|+..+++
T Consensus 21 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 82 (568)
T 2vsy_A 21 QDFVAWLMLADAELGMGDTTAGEMAVQRGLA------------------LHPGHPEAVARLGRVRWTQQRHAEAAVLLQQ 82 (568)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHT------------------TSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3467899999999999999999999999999 7777888999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH---HHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKI---HERREQEK 353 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~---~~~~~~~k 353 (361)
+++++|++..+++++|.++..+|++++|++.|+++++++|++..++..++.+...+ ++.+++..
T Consensus 83 al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~ 149 (568)
T 2vsy_A 83 ASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSA 149 (568)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888 66655443
No 85
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.45 E-value=2.4e-13 Score=110.91 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
++|.+..+++++|.++...|+|++|+..+++++.++|.++.+|+.+|.++..+|++++|+..|+++++++|+++.++..+
T Consensus 16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 95 (148)
T 2vgx_A 16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHA 95 (148)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 78889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018098 339 AVAKKKIHERREQEKK 354 (361)
Q Consensus 339 ~~~~~~~~~~~~~~k~ 354 (361)
+.+...+++.+++.+.
T Consensus 96 g~~~~~~g~~~~A~~~ 111 (148)
T 2vgx_A 96 AECLLQXGELAEAESG 111 (148)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 9999888877766543
No 86
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.44 E-value=5.1e-13 Score=129.88 Aligned_cols=124 Identities=12% Similarity=0.022 Sum_probs=115.4
Q ss_pred hHHHHHhcchhHHh---------hhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc-----
Q 018098 212 VDSIKVFGNEHYKK---------QDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL----- 277 (361)
Q Consensus 212 a~~~~~~G~~~~~~---------g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l----- 277 (361)
+..+..+|..+... |+|++|+..|+++++ ++|.+..+|+++|.+|..+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~~~~~~ 231 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ------------------MDVLDGRSWYILGNAYLSLYFNTG 231 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHHHHhhc
Confidence 35677788888888 999999999999999 8888899999999999999
Q ss_pred ---CChHHHHHHHHHHhhcCC---CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 278 ---GDLKGALLDTEFAMRDGD---DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 278 ---~~~~~Al~~~~~al~~~p---~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
|++++|+..+++|++++| .++.+|+++|.+|..+|++++|+..|+++++++|++..++..++.+...+++.+++
T Consensus 232 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eA 311 (474)
T 4abn_A 232 QNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSL 311 (474)
T ss_dssp CCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 99999999999999999999999999999999999999999999999988877665
Q ss_pred HH
Q 018098 352 EK 353 (361)
Q Consensus 352 ~k 353 (361)
.+
T Consensus 312 i~ 313 (474)
T 4abn_A 312 LE 313 (474)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 87
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.43 E-value=1.4e-12 Score=108.05 Aligned_cols=124 Identities=20% Similarity=0.205 Sum_probs=113.1
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..++..|++++|+..|++++. ..|....++.++|.++...|++++|+..+++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~ 103 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLA------------------DAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVA 103 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHh------------------cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 56688899999999999999999999998 666677889999999999999999999999999
Q ss_pred hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
..+|.+..+++.+|.++..+|++++|+..++++++++|.+..++..++.+....++.+++.+
T Consensus 104 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 165 (186)
T 3as5_A 104 EANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALP 165 (186)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888776665543
No 88
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.43 E-value=7.2e-13 Score=128.85 Aligned_cols=124 Identities=17% Similarity=0.113 Sum_probs=116.5
Q ss_pred hhHHHHHhcchhHHhhhH-HHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDY-KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
.+..+..+|..++..|+| ++|+.+|+++++ ++|....+|+++|.+|.++|++++|+..|++
T Consensus 101 ~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~ 162 (474)
T 4abn_A 101 EAQALMLKGKALNVTPDYSPEAEVLLSKAVK------------------LEPELVEAWNQLGEVYWKKGDVTSAHTCFSG 162 (474)
T ss_dssp CHHHHHHHHHHHTSSSSCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccccHHHHHHHHHHHHh------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 477899999999999999 999999999999 7888889999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhc---------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH--------HHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMAL---------NDVDAAVESFEKALKLEPNDGGIKKELAVAKKKI--------HERREQE 352 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l---------~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~--------~~~~~~~ 352 (361)
+++++|+ ..+++++|.++..+ |++++|+..|+++++++|++..++..++.+...+ ++.+++.
T Consensus 163 al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~ 241 (474)
T 4abn_A 163 ALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQAL 241 (474)
T ss_dssp HHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHhhCCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHH
Confidence 9999999 79999999999999 9999999999999999999999999999999888 7766654
Q ss_pred H
Q 018098 353 K 353 (361)
Q Consensus 353 k 353 (361)
+
T Consensus 242 ~ 242 (474)
T 4abn_A 242 S 242 (474)
T ss_dssp H
T ss_pred H
Confidence 4
No 89
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.43 E-value=6.8e-13 Score=116.36 Aligned_cols=98 Identities=21% Similarity=0.370 Sum_probs=49.1
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+..+|..++..|+|++|+..|++++. ..|....++.++|.++..+|++++|+..++++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 140 EEARLEGKEYFTKSDWPNAVKAYTEMIK------------------RAPEDARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh------------------cCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3444445555555555555555555544 3333344455555555555555555555555555
Q ss_pred cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 293 DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 293 ~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
++|+++.+++.+|.++..+|++++|+..|+++++++
T Consensus 202 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 202 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred hCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 555555555555555555555555555555555555
No 90
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.42 E-value=2.5e-13 Score=137.93 Aligned_cols=124 Identities=11% Similarity=-0.005 Sum_probs=115.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|+++++ .+|.+..+|+++|.++..+|++++|+..|++|
T Consensus 432 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 493 (681)
T 2pzi_A 432 SVELPLMEVRALLDLGDVAKATRKLDDLAE------------------RVGWRWRLVWYRAVAELLTGDYDSATKHFTEV 493 (681)
T ss_dssp CSHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhcCCHHHHHHHHHHHhc------------------cCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 456788899999999999999999999999 88999999999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++++|+++.+++++|.++..+|++++ +..|+++++++|++..++..++.+...+++.+++.+
T Consensus 494 l~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~ 555 (681)
T 2pzi_A 494 LDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVR 555 (681)
T ss_dssp HHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999 999999999999999999999999988888776654
No 91
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.42 E-value=2.4e-12 Score=114.15 Aligned_cols=114 Identities=15% Similarity=0.058 Sum_probs=104.9
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+..|++++. .+|....++.++|.++..+|++++|+..+++
T Consensus 41 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 102 (275)
T 1xnf_A 41 ERAQLLYERGVLYDSLGLRALARNDFSQALA------------------IRPDMPEVFNYLGIYLTQAGNFDAAYEAFDS 102 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcccHHHHHHHHHHHHH------------------cCCCcHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3577889999999999999999999999999 6777788999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
+++++|.++.+++.+|.++..+|++++|+..|+++++++|++......+..+
T Consensus 103 al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 103 VLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998655554433
No 92
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.42 E-value=6.1e-13 Score=118.26 Aligned_cols=107 Identities=14% Similarity=0.143 Sum_probs=97.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHH---HHHHHHHHHHHHhcCChHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTK---SQIFTNSSACKLKLGDLKGALLDT 287 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~nla~~~~~l~~~~~Al~~~ 287 (361)
.+..+..+|..+++.|+|++|+..|+++++ ..|.. ..+++++|.||.++|+|++|+..+
T Consensus 14 ~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~------------------~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~ 75 (261)
T 3qky_A 14 SPQEAFERAMEFYNQGKYDRAIEYFKAVFT------------------YGRTHEWAADAQFYLARAYYQNKEYLLAASEY 75 (261)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHGG------------------GCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH------------------hCCCCcchHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 467899999999999999999999999998 33333 789999999999999999999999
Q ss_pred HHHhhcCCCc---hhhHhHHHHHHHh--------cCCHHHHHHHHHHHHHhCCCCHHHH
Q 018098 288 EFAMRDGDDN---VKALFRQGQAYMA--------LNDVDAAVESFEKALKLEPNDGGIK 335 (361)
Q Consensus 288 ~~al~~~p~~---~ka~~~~a~a~~~--------l~~~~~A~~~~~~al~l~P~~~~~~ 335 (361)
++++++.|++ ..+++.+|.++.. +|++++|+..|+++++++|++..+.
T Consensus 76 ~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~ 134 (261)
T 3qky_A 76 ERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVD 134 (261)
T ss_dssp HHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHH
T ss_pred HHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHH
Confidence 9999998854 6799999999999 9999999999999999999987666
No 93
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.41 E-value=1.8e-12 Score=111.09 Aligned_cols=103 Identities=12% Similarity=0.066 Sum_probs=97.1
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..++..|+|++|+..|+++++ ++|....+++++|.+|..+|++++|+.++++++
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al 98 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSIN------------------RDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEAL 98 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCccchHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 56789999999999999999999999999 777788999999999999999999999999999
Q ss_pred hcCCCch----------------hhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 018098 292 RDGDDNV----------------KALFRQGQAYMALNDVDAAVESFEKALKLEPNDG 332 (361)
Q Consensus 292 ~~~p~~~----------------ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~ 332 (361)
++.|.+. .+++++|.++..+|++++|+..|+++++++|++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 99 IQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp HTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred HhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9888776 9999999999999999999999999999999764
No 94
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.39 E-value=4.4e-12 Score=111.08 Aligned_cols=141 Identities=13% Similarity=0.128 Sum_probs=82.4
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccccc------------------CCCCccc-----hhH---------
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEK------------------EGIDEGK-----SSS--------- 258 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~------------------~~~~~~~-----~~~--------- 258 (361)
.+..+..+|..++..|+|++|+..|++++++.+...+. ....... ...
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~ 116 (258)
T 3uq3_A 37 DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILT 116 (258)
T ss_dssp CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHH
Confidence 35677888888899999999999999988854321100 0000000 001
Q ss_pred -----------------HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHH
Q 018098 259 -----------------LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESF 321 (361)
Q Consensus 259 -----------------~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~ 321 (361)
..|....++.++|.++..+|++++|+..+++++.++|.++.+++.+|.++..+|++++|+..|
T Consensus 117 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 196 (258)
T 3uq3_A 117 KLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADC 196 (258)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 234444555566666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 322 EKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 322 ~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
+++++++|++..++..++.+...+++.+++
T Consensus 197 ~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 197 NKAIEKDPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 666666666666666666655555544443
No 95
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.39 E-value=1.1e-12 Score=121.54 Aligned_cols=123 Identities=17% Similarity=0.175 Sum_probs=107.0
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..++..|+|++|+..|++++. ..|....++.++|.++..+|++++|+..+++++
T Consensus 217 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~------------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al 278 (368)
T 1fch_A 217 PDVQCGLGVLFNLSGEYDKAVDCFTAALS------------------VRPNDYLLWNKLGATLANGNQSEEAVAAYRRAL 278 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 56678888889999999999999999988 666677889999999999999999999999999
Q ss_pred hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-----------HHHHHHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND-----------GGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~-----------~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+++|.++.+++.+|.++..+|++++|+..|+++++++|++ ..++..++.+...+++.+++.
T Consensus 279 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 350 (368)
T 1fch_A 279 ELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLGQSDAYG 350 (368)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHTCGGGHH
T ss_pred HhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhCChHhHH
Confidence 9999999999999999999999999999999999998887 788888888888877665544
No 96
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.39 E-value=2e-12 Score=107.21 Aligned_cols=125 Identities=19% Similarity=0.159 Sum_probs=114.2
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|++++|+..|++++. ..|....++.++|.++...|++++|+..++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~ 68 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYD------------------ADAFDVDVALHLGIAYVKTGAVDRGTELLERS 68 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCC------------------TTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCccChHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 467788999999999999999999999988 45556788999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
+.++|.+..+++.+|.++...|++++|+..++++++++|.+..++..++.+....++.+++.+
T Consensus 69 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 131 (186)
T 3as5_A 69 LADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAID 131 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999998887776655443
No 97
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.39 E-value=1.6e-13 Score=139.38 Aligned_cols=115 Identities=14% Similarity=0.010 Sum_probs=108.7
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|++|++ ++|.+..+++++|.++.++|+|++ +.+|++|
T Consensus 466 ~~~a~~~lg~~~~~~g~~~~A~~~~~~al~------------------l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~a 526 (681)
T 2pzi_A 466 RWRLVWYRAVAELLTGDYDSATKHFTEVLD------------------TFPGELAPKLALAATAELAGNTDE-HKFYQTV 526 (681)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCChHHHHHHHHHHHHcCChHH-HHHHHHH
Confidence 366788899999999999999999999999 888889999999999999999999 9999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
++++|+++.+++++|.++..+|++++|++.|+++++++|++..++..++.+...
T Consensus 527 l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~~~ 580 (681)
T 2pzi_A 527 WSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTLLS 580 (681)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHTC-
T ss_pred HHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999998888644
No 98
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.39 E-value=3.5e-12 Score=117.09 Aligned_cols=122 Identities=20% Similarity=0.216 Sum_probs=107.9
Q ss_pred HHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 214 ~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
.....|..+++.|++++|+..|++++...+. .......++.++|.++.++|++++|+..+++++++
T Consensus 236 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~--------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 236 KLIESAEELIRDGRYTDATSKYESVMKTEPS--------------VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--------------SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC--------------chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 3456689999999999999999999983321 12234456889999999999999999999999999
Q ss_pred CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 018098 294 GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 294 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 349 (361)
+|+++.+++.+|.++..+|++++|+..|+++++++|++..++..+..++..+++.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~ 357 (359)
T 3ieg_A 302 EPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQSQ 357 (359)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988887654
No 99
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.38 E-value=4.6e-12 Score=110.24 Aligned_cols=124 Identities=19% Similarity=0.173 Sum_probs=99.4
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|++++|+..|+++++ ..|....++.++|.++..+|++++|+..++++
T Consensus 56 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 117 (243)
T 2q7f_A 56 DAIPYINFANLLSSVNELERALAFYDKALE------------------LDSSAATAYYGAGNVYVVKEMYKEAKDMFEKA 117 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------cCCcchHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 356788889999999999999999999998 55566677788888888888888888888888
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
++++|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....++.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 179 (243)
T 2q7f_A 118 LRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEAL 179 (243)
T ss_dssp HHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHH
Confidence 88888888888888888888888888888888888888888877777777776666554443
No 100
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.38 E-value=2e-12 Score=120.29 Aligned_cols=120 Identities=14% Similarity=0.131 Sum_probs=104.4
Q ss_pred HHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHH--HHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 216 KVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT--KSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 216 ~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
..+|..+...|++++|+..|++++. ..|. ...++.++|.++..+|++++|+..+++++++
T Consensus 181 ~~l~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 242 (365)
T 4eqf_A 181 RRMSKSPVDSSVLEGVKELYLEAAH------------------QNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTV 242 (365)
T ss_dssp --------CCHHHHHHHHHHHHHHH------------------HSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHH------------------hCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 4458899999999999999999998 5565 6778999999999999999999999999999
Q ss_pred CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 294 GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 294 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
+|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+...+++.+++..
T Consensus 243 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 302 (365)
T 4eqf_A 243 RPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVS 302 (365)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999888877666543
No 101
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.38 E-value=4.4e-13 Score=111.86 Aligned_cols=122 Identities=15% Similarity=0.085 Sum_probs=105.7
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~ 294 (361)
+...+..++..|+|++|+..|++++. .+|....++.++|.+|..+|++++|+..+++++.++
T Consensus 13 ~~~~~~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 74 (177)
T 2e2e_A 13 QRDPLHQFASQQNPEAQLQALQDKIR------------------ANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLR 74 (177)
T ss_dssp SSTTTCCCC-----CCCCHHHHHHHH------------------HCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhccCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 33455667788999999999999998 777788899999999999999999999999999999
Q ss_pred CCchhhHhHHHHH-HHhcCCH--HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 295 DDNVKALFRQGQA-YMALNDV--DAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 295 p~~~ka~~~~a~a-~~~l~~~--~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
|.++.+++.+|.+ +...|++ ++|+..|+++++++|++..++..++.+....++.+++...
T Consensus 75 p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~ 137 (177)
T 2e2e_A 75 GENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIEL 137 (177)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHH
Confidence 9999999999999 8899999 9999999999999999999999999998888777665543
No 102
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.38 E-value=8.5e-14 Score=106.41 Aligned_cols=95 Identities=20% Similarity=0.272 Sum_probs=81.8
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|+++++ ++|.+..++.++|.|+.++|+|++|+.+++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 64 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLIT------------------AQPQNPVGYSNKAMALIKLGEYTQAIQMCQQG 64 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHh------------------cCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 467788889999999999999999999988 67777888899999999999999999999999
Q ss_pred hhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHH
Q 018098 291 MRDGDDN------VKALFRQGQAYMALNDVDAAVESFEK 323 (361)
Q Consensus 291 l~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~ 323 (361)
++++|++ ..+++++|.++..+|++++|+..+++
T Consensus 65 l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 65 LRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 9999988 88899999999988888887766554
No 103
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.38 E-value=1.4e-12 Score=121.19 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=113.2
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+...|+|++|+..|+++++ ..|....+|.++|.+|..+|++++|+..++++
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 273 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALT------------------VRPEDYSLWNRLGATLANGDRSEEAVEAYTRA 273 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356788999999999999999999999999 77777889999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN------------DGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~------------~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++++|+++.+++.+|.++..+|++++|+..|+++++++|+ +..++..++.+...+++.+..++
T Consensus 274 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~a~~ 348 (365)
T 4eqf_A 274 LEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPHPAISGNIWAALRIALSLMDQPELFQA 348 (365)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHHHHTCHHHHHH
T ss_pred HhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccchhhhHHHHHHHHHHHHHHcCcHHHHHH
Confidence 9999999999999999999999999999999999999987 36778888888887776655443
No 104
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.38 E-value=5.6e-12 Score=112.01 Aligned_cols=119 Identities=13% Similarity=0.175 Sum_probs=105.1
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh--------cCChHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK--------LGDLKGA 283 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~--------l~~~~~A 283 (361)
+..+..+|..+++.|+|++|+..|+++++..+ -++....+++++|.|+.. +|++++|
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p---------------~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A 116 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQ---------------IDPRVPQAEYERAMCYYKLSPPYELDQTDTRKA 116 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT---------------TCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCC---------------CCchhHHHHHHHHHHHHHhcccccccchhHHHH
Confidence 67889999999999999999999999998321 123556789999999999 9999999
Q ss_pred HHHHHHHhhcCCCchhhH-----------------hHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHH
Q 018098 284 LLDTEFAMRDGDDNVKAL-----------------FRQGQAYMALNDVDAAVESFEKALKLEPND---GGIKKELAVAKK 343 (361)
Q Consensus 284 l~~~~~al~~~p~~~ka~-----------------~~~a~a~~~l~~~~~A~~~~~~al~l~P~~---~~~~~~l~~~~~ 343 (361)
+..++++++.+|++..+. +.+|.+|..+|++++|+..|+++++..|++ ..++..++.+..
T Consensus 117 ~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~ 196 (261)
T 3qky_A 117 IEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYI 196 (261)
T ss_dssp HHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH
Confidence 999999999999987666 899999999999999999999999999984 567888888877
Q ss_pred HH
Q 018098 344 KI 345 (361)
Q Consensus 344 ~~ 345 (361)
.+
T Consensus 197 ~~ 198 (261)
T 3qky_A 197 AY 198 (261)
T ss_dssp HH
T ss_pred Hh
Confidence 66
No 105
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.37 E-value=1.9e-12 Score=104.34 Aligned_cols=96 Identities=10% Similarity=0.053 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
++|.....++++|.+++..|+|++|+..+++++.++|+++.+|+.+|.++..+|++++|+..|+++++++|+++.++..+
T Consensus 13 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 13 LSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 77888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 018098 339 AVAKKKIHERREQEKK 354 (361)
Q Consensus 339 ~~~~~~~~~~~~~~k~ 354 (361)
+.+...+++.+++.+.
T Consensus 93 g~~~~~~g~~~~A~~~ 108 (142)
T 2xcb_A 93 AECHLQLGDLDGAESG 108 (142)
T ss_dssp HHHHHHTTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHH
Confidence 9999888877665543
No 106
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.37 E-value=4.7e-12 Score=110.25 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=96.4
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..+++.|+|++|+..|+++++..+ ..+....+++++|.+|.++|+|++|+..+++++
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p---------------~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l 68 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYP---------------FGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFI 68 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---------------TSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---------------CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 56788999999999999999999999998221 122345789999999999999999999999999
Q ss_pred hcCCCchh---hHhHHHHHHHh------------------cCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 018098 292 RDGDDNVK---ALFRQGQAYMA------------------LNDVDAAVESFEKALKLEPNDGGIKKE 337 (361)
Q Consensus 292 ~~~p~~~k---a~~~~a~a~~~------------------l~~~~~A~~~~~~al~l~P~~~~~~~~ 337 (361)
+.+|++.. +++.+|.++.. +|++++|+..|+++++..|++..+...
T Consensus 69 ~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a 135 (225)
T 2yhc_A 69 RLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDA 135 (225)
T ss_dssp HHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHH
T ss_pred HHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHH
Confidence 99999875 89999999886 579999999999999999998765543
No 107
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.37 E-value=2.4e-12 Score=116.66 Aligned_cols=124 Identities=10% Similarity=0.049 Sum_probs=107.8
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH-
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF- 289 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~- 289 (361)
.+..+...|..+...|++++|+..|+++++ .+|.+..++.++|.++..+|++++|+..+++
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~ 177 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQ------------------LSNQNGEIGLLLAETLIALNRSEDAEAVLXTI 177 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTS
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHH------------------hCCcchhHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 356788899999999999999999999999 8888889999999999999998887655554
Q ss_pred ---------------------------------HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHH
Q 018098 290 ---------------------------------AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND--GGI 334 (361)
Q Consensus 290 ---------------------------------al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~--~~~ 334 (361)
++..+|+++.+++.+|.++..+|++++|+..|+++++++|++ ..+
T Consensus 178 ~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a 257 (287)
T 3qou_A 178 PLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQT 257 (287)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHH
T ss_pred chhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchH
Confidence 466788999999999999999999999999999999999988 889
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018098 335 KKELAVAKKKIHERREQE 352 (361)
Q Consensus 335 ~~~l~~~~~~~~~~~~~~ 352 (361)
+..+..+...+.+..++.
T Consensus 258 ~~~l~~~~~~~g~~~~a~ 275 (287)
T 3qou_A 258 RXTFQEILAALGTGDALA 275 (287)
T ss_dssp HHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHcCCCCcHH
Confidence 999999988876554433
No 108
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.36 E-value=6.7e-12 Score=110.18 Aligned_cols=121 Identities=20% Similarity=0.170 Sum_probs=78.9
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..++..|++++|+..|+++++ ..|....++.++|.++..+|++++|+..+++++
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~ 132 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALA------------------SDSRNARVLNNYGGFLYEQKRYEEAYQRLLEAS 132 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------HCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 45677788888888888888888888887 344445556666666666666666666666666
Q ss_pred h--cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q 018098 292 R--DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERRE 350 (361)
Q Consensus 292 ~--~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 350 (361)
. .+|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....++.++
T Consensus 133 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 193 (252)
T 2ho1_A 133 QDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVP 193 (252)
T ss_dssp TCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHH
T ss_pred hCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHH
Confidence 6 5555666666666666666666666666666666666666666666655555544443
No 109
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.36 E-value=3.4e-12 Score=119.77 Aligned_cols=121 Identities=22% Similarity=0.237 Sum_probs=89.3
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+.+.|++++|+..|+++++ ++|....+|.++|.++.+.|++++|+..++++
T Consensus 66 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 127 (388)
T 1w3b_A 66 LAEAYSNLGNVYKERGQLQEAIEHYRHALR------------------LKPDFIDGYINLAAALVAAGDMEGAVQAYVSA 127 (388)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------cCcchHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 467889999999999999999999999998 55666666777777777777777777777777
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 349 (361)
++++|++..++..+|.++..+|++++|+..|+++++++|++..++..++.+....++..
T Consensus 128 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 186 (388)
T 1w3b_A 128 LQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIW 186 (388)
T ss_dssp HHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHH
T ss_pred HHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Confidence 77777777777777777777777777777777777777766666666666655544443
No 110
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.36 E-value=1.7e-12 Score=115.29 Aligned_cols=120 Identities=13% Similarity=0.133 Sum_probs=72.2
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
+.+...|..++..|+|++|+..|+++++ .+|....++.++|.++..+|++++|+..+++++.
T Consensus 4 ~~~~~~a~~~~~~~~~~~A~~~~~~~l~------------------~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 65 (272)
T 3u4t_A 4 DVEFRYADFLFKNNNYAEAIEVFNKLEA------------------KKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS 65 (272)
T ss_dssp -CHHHHHHHHHTTTCHHHHHHHHHHHHH------------------TTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3456677777777777777777777776 3344444556666666666666666666666665
Q ss_pred cCCCch----hhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 293 DGDDNV----KALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 293 ~~p~~~----ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
.|.+. .+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....++.+++
T Consensus 66 -~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A 127 (272)
T 3u4t_A 66 -KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLA 127 (272)
T ss_dssp -TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHH
T ss_pred -ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHH
Confidence 22332 23566666666666666666666666666666666666666665555554443
No 111
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.36 E-value=4.1e-12 Score=110.54 Aligned_cols=124 Identities=22% Similarity=0.194 Sum_probs=111.4
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+...|++++|+..|+++++ ..|....++.++|.++..+|++++|+..++++
T Consensus 90 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 151 (243)
T 2q7f_A 90 AATAYYGAGNVYVVKEMYKEAKDMFEKALR------------------AGMENGDLFYMLGTVLVKLEQPKLALPYLQRA 151 (243)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhccHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 356788899999999999999999999998 55666778999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+.++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.+....++.+++.
T Consensus 152 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 213 (243)
T 2q7f_A 152 VELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKAL 213 (243)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHH
T ss_pred HHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999887776665543
No 112
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.36 E-value=8.3e-12 Score=106.96 Aligned_cols=122 Identities=15% Similarity=0.023 Sum_probs=86.4
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL-GDLKGALLDTEFA 290 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-~~~~~Al~~~~~a 290 (361)
+..+..+|..+...|++++|+..|++++. ..|....++.++|.++..+ |++++|+..++++
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~ 103 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALS------------------IKPDSAEINNNYGWFLCGRLNRPAESMAYFDKA 103 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHH------------------hCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 45666777777778888888888888777 4455556677777777777 7777777777777
Q ss_pred hh--cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MR--DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 291 l~--~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
+. .+|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....++.+++
T Consensus 104 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 166 (225)
T 2vq2_A 104 LADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDA 166 (225)
T ss_dssp HTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHH
Confidence 77 55556677777777777777777777777777777777777777777766666555444
No 113
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.36 E-value=3.6e-12 Score=106.55 Aligned_cols=121 Identities=13% Similarity=0.112 Sum_probs=93.0
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH----
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE---- 288 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~---- 288 (361)
..+...|..++..|++++|+..|+++++ .+|.+..++.++|.++..+|++++|+..++
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~------------------~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~ 68 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSD------------------ELQSRGDVKLAKADCLLETKQFELAQELLATIPL 68 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCH------------------HHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------HCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhh
Confidence 3456677777778888888888888877 777777777777777777777776665444
Q ss_pred ------------------------------HHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC--HHHHH
Q 018098 289 ------------------------------FAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND--GGIKK 336 (361)
Q Consensus 289 ------------------------------~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~--~~~~~ 336 (361)
++++++|+++.+++.+|.++..+|++++|+..|+++++++|+. ..++.
T Consensus 69 ~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~ 148 (176)
T 2r5s_A 69 EYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKK 148 (176)
T ss_dssp GGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHH
T ss_pred ccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHH
Confidence 4455677788889999999999999999999999999999875 55888
Q ss_pred HHHHHHHHHHHHHHH
Q 018098 337 ELAVAKKKIHERREQ 351 (361)
Q Consensus 337 ~l~~~~~~~~~~~~~ 351 (361)
.++.+...+++..++
T Consensus 149 ~l~~~~~~~g~~~~A 163 (176)
T 2r5s_A 149 TFMDILSALGQGNAI 163 (176)
T ss_dssp HHHHHHHHHCSSCHH
T ss_pred HHHHHHHHhCCCCcH
Confidence 888887777655443
No 114
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.36 E-value=6.2e-12 Score=107.76 Aligned_cols=126 Identities=16% Similarity=0.050 Sum_probs=114.2
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|++++|+..|+++++ ..|....++..+|.++..+|++++|+..+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 67 (225)
T 2vq2_A 6 QVSNIKTQLAMEYMRGQDYRQATASIEDALK------------------SDPKNELAWLVRAEIYQYLKVNDKAQESFRQ 67 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhHHHHHHHHHHHHH------------------hCccchHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 3577889999999999999999999999998 6667778999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMAL-NDVDAAVESFEKALK--LEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l-~~~~~A~~~~~~al~--l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++.++|.+..+++.+|.++..+ |++++|+..|+++++ .+|.+..++..++.+....++.+++..
T Consensus 68 a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 134 (225)
T 2vq2_A 68 ALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEA 134 (225)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999 999999999999999 667778889999988887776665543
No 115
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.36 E-value=4.8e-12 Score=118.77 Aligned_cols=140 Identities=16% Similarity=0.131 Sum_probs=84.5
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccc-----------cCCCCccc-----hhHHHHHHHHHHHHHHHHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE-----------KEGIDEGK-----SSSLRKTKSQIFTNSSACKL 275 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~-----------~~~~~~~~-----~~~~~~~~~~~~~nla~~~~ 275 (361)
+..+..+|..+...|++++|+..|++++++-+.... ........ ...++|....++.++|.++.
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 248 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYY 248 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHH
Confidence 566777888888888888888888888873221100 00000000 01234445556666666666
Q ss_pred hcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 276 KLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 276 ~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
.+|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....++.+++
T Consensus 249 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 324 (388)
T 1w3b_A 249 EQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEA 324 (388)
T ss_dssp HTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666666665555554443
No 116
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.35 E-value=7e-12 Score=111.18 Aligned_cols=123 Identities=16% Similarity=0.084 Sum_probs=109.1
Q ss_pred HhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC
Q 018098 217 VFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDD 296 (361)
Q Consensus 217 ~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~ 296 (361)
.++..+...++|++|+..|++++.... ...|....++.++|.++..+|++++|+..+++++.++|.
T Consensus 10 ~~~~~~~~~~~~~~A~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 75 (275)
T 1xnf_A 10 VLAVPLQPTLQQEVILARMEQILASRA--------------LTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD 75 (275)
T ss_dssp GSCCCCCCCHHHHHHHHHHHHHHTSSC--------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred ceeeccCccchHHHHHHHHHHHHhccc--------------ccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC
Confidence 455566678999999999999998311 025678899999999999999999999999999999999
Q ss_pred chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 297 NVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 297 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.+...+++.+++.+
T Consensus 76 ~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~ 132 (275)
T 1xnf_A 76 MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQD 132 (275)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999999999999999999999999999999999999888877765543
No 117
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.34 E-value=4e-12 Score=116.73 Aligned_cols=112 Identities=20% Similarity=0.249 Sum_probs=105.4
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.++.+..+|..++..|+|++|+..|++++. .+|....++.++|.++..+|++++|+..++++
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~------------------~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~ 63 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVD------------------GDPDNYIAYYRRATVFLAMGKSKAALPDLTKV 63 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh------------------hCcccHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 367889999999999999999999999998 77778889999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCC---CCHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEP---NDGGIKKELAV 340 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P---~~~~~~~~l~~ 340 (361)
+.++|++..+++.+|.++..+|++++|+..|+++++++| ++..++..++.
T Consensus 64 ~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~ 116 (359)
T 3ieg_A 64 IALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVK 116 (359)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred HHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHH
Confidence 999999999999999999999999999999999999999 88888877753
No 118
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.34 E-value=6.8e-12 Score=97.01 Aligned_cols=101 Identities=15% Similarity=0.104 Sum_probs=88.1
Q ss_pred HHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHH
Q 018098 230 MALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYM 309 (361)
Q Consensus 230 ~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~ 309 (361)
.|+..|+++++ .+|.+..+++++|.+|..+|++++|+..++++++++|.+..+++.+|.++.
T Consensus 3 ~a~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~ 64 (115)
T 2kat_A 3 AITERLEAMLA------------------QGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQ 64 (115)
T ss_dssp CHHHHHHHHHT------------------TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHH
Confidence 57889999998 677778899999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHH
Q 018098 310 ALNDVDAAVESFEKALKLEPN--DGGIKKELAVAKKKIHER 348 (361)
Q Consensus 310 ~l~~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~~~~~ 348 (361)
.+|++++|+..|+++++++|. +......+..+...+.+.
T Consensus 65 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 65 GQGDRAGARQAWESGLAAAQSRGDQQVVKELQVFLRRLARE 105 (115)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHhccc
Confidence 999999999999999999985 445555555555555443
No 119
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.34 E-value=8.8e-12 Score=113.08 Aligned_cols=131 Identities=8% Similarity=-0.074 Sum_probs=107.0
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc-CChHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL-GDLKGALLDTEF 289 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-~~~~~Al~~~~~ 289 (361)
.+..+.++|..+...|+|++|+.+|++|+.+.... ........++.++|.+|..+ |++++|+.+|++
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~------------g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~ 143 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR------------GQFRRGANFKFELGEILENDLHDYAKAIDCYEL 143 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc------------CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 47788999999999999999999999999944211 01122367899999999995 999999999999
Q ss_pred HhhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH-------HHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG-------IKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 290 al~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~-------~~~~l~~~~~~~~~~~~~~k 353 (361)
|+++.|.. ..++.++|.++..+|++++|+..|++++++.|++.. ++..++.+...+++..++.+
T Consensus 144 Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~ 220 (292)
T 1qqe_A 144 AGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAAR 220 (292)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 99998754 578999999999999999999999999999998654 45667777776666555443
No 120
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.1e-11 Score=97.22 Aligned_cols=93 Identities=14% Similarity=0.097 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
..+..+.++|.++++.|+|++|+..++++++++|+++.+++++|.++..+|++++|+.+|+++++++|++..++..++.+
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 018098 342 KKKIHERREQEKK 354 (361)
Q Consensus 342 ~~~~~~~~~~~k~ 354 (361)
...+++.+++...
T Consensus 82 ~~~~~~~~~A~~~ 94 (126)
T 3upv_A 82 QIAVKEYASALET 94 (126)
T ss_dssp HHHTTCHHHHHHH
T ss_pred HHHHhCHHHHHHH
Confidence 9888877665543
No 121
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.34 E-value=4.3e-12 Score=100.49 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH------
Q 018098 260 RKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG------ 333 (361)
Q Consensus 260 ~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~------ 333 (361)
.+..+.++.++|.++++.|+|++|+.+|++||+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|++..
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a 83 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIA 83 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHH
Confidence 45667789999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred -HHHHHHHHHHHHHHHHHHH
Q 018098 334 -IKKELAVAKKKIHERREQE 352 (361)
Q Consensus 334 -~~~~l~~~~~~~~~~~~~~ 352 (361)
++..++.+...+++.+++.
T Consensus 84 ~~~~~lg~~~~~~~~~~~A~ 103 (127)
T 4gcn_A 84 KAMSRAGNAFQKQNDLSLAV 103 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHH
Confidence 4555555555555554443
No 122
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.33 E-value=9.2e-12 Score=110.46 Aligned_cols=118 Identities=22% Similarity=0.224 Sum_probs=104.5
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..+...|++++|+..|+++++ .+|....++.++|.+|..+|++++|+..+++++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 135 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVD------------------RDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQI 135 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHh------------------cCcccHHHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 55678899999999999999999999998 777777899999999999999999999999999
Q ss_pred hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
+++|.++.+++.+|...+..+++++|+..|+++++++|++...+..++.+...+.+
T Consensus 136 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 136 RPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp CSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 99999999999999444445699999999999999999999888888888776654
No 123
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.33 E-value=7.1e-12 Score=113.80 Aligned_cols=124 Identities=15% Similarity=0.166 Sum_probs=113.5
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+...|++++|+..|+++++ ..|....++.++|.++..+|++++|+..++++
T Consensus 171 ~~~~~~~la~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 232 (327)
T 3cv0_A 171 DAQLHASLGVLYNLSNNYDSAAANLRRAVE------------------LRPDDAQLWNKLGATLANGNRPQEALDAYNRA 232 (327)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356788899999999999999999999998 66777789999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC------------CHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN------------DGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~------------~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
++++|.+..+++.+|.++..+|++++|+..|+++++++|. +..++..++.+...+++.+++.
T Consensus 233 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 306 (327)
T 3cv0_A 233 LDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLVE 306 (327)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHHH
Confidence 9999999999999999999999999999999999999999 7889999999988887776554
No 124
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.32 E-value=5.9e-12 Score=110.52 Aligned_cols=125 Identities=15% Similarity=0.135 Sum_probs=114.9
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|++++. ..|....++.++|.++..+|++++|+..++++
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 97 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALE------------------IDPSSADAHAALAVVFQTEMEPKLADEEYRKA 97 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHh------------------cCCChHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 478899999999999999999999999998 66777889999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALK--LEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~--l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++++|.+..+++.+|.++..+|++++|+..|+++++ .+|.+..++..++.+....++.+++.+
T Consensus 98 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 162 (252)
T 2ho1_A 98 LASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKE 162 (252)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999999999999999999999999999 888888999999988877776655443
No 125
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.32 E-value=1.1e-11 Score=119.83 Aligned_cols=107 Identities=23% Similarity=0.297 Sum_probs=99.8
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~ 288 (361)
.+.+..+...|+.+++.|+|++|+..|++++. .+| +..++.++|.|+.++|++++|+..++
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~------------------~~p-~~~~~~~la~~~~~~g~~~~A~~~~~ 63 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALE------------------LKE-DPVFYSNLSACYVSVGDLKKVVEMST 63 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH------------------HCC-CHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHh------------------cCc-cHHHHHhHHHHHHHHhhHHHHHHHHH
Confidence 45789999999999999999999999999998 555 46789999999999999999999999
Q ss_pred HHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 018098 289 FAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGI 334 (361)
Q Consensus 289 ~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~ 334 (361)
++++++|++..+++.+|.++..+|++++|+..|+++++++|.+...
T Consensus 64 ~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~ 109 (514)
T 2gw1_A 64 KALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDAS 109 (514)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGG
T ss_pred HHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccch
Confidence 9999999999999999999999999999999999999999976443
No 126
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.32 E-value=1.6e-11 Score=108.75 Aligned_cols=134 Identities=17% Similarity=0.122 Sum_probs=114.4
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+..|++++++...... ...+....++.++|.+|..+|++++|+.++.+
T Consensus 41 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 110 (283)
T 3edt_B 41 DVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLG----------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKR 110 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTC----------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcC----------CcchHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 35778899999999999999999999999984321100 01367788999999999999999999999999
Q ss_pred Hhhc--------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRD--------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL--------EPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 290 al~~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--------~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++.+ +|....+++.+|.++..+|++++|+..|++++++ +|....++..++.+...+++.+++.+
T Consensus 111 al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 190 (283)
T 3edt_B 111 ALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAET 190 (283)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 9988 5778999999999999999999999999999999 67677888899999888877766543
No 127
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.30 E-value=2.2e-11 Score=116.13 Aligned_cols=120 Identities=20% Similarity=0.222 Sum_probs=105.3
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~ 294 (361)
....|..++..|++++|+..|++++.+.+. .......++.++|.++.++|++++|+..+++++.++
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~--------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 325 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPS--------------IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQME 325 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCS--------------SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--------------chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 345599999999999999999999983221 111235689999999999999999999999999999
Q ss_pred CCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 018098 295 DDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHER 348 (361)
Q Consensus 295 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 348 (361)
|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.+...+++.
T Consensus 326 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 379 (450)
T 2y4t_A 326 PDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNENDQQIREGLEKAQRLLKQS 379 (450)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999887766543
No 128
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.30 E-value=1.2e-11 Score=112.41 Aligned_cols=125 Identities=20% Similarity=0.085 Sum_probs=112.6
Q ss_pred hhHHHHHhcchhHHhh-hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQ-DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g-~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
.+..+..+|..++..| ++++|+..|++++. .+|....+|.++|.++..+|++++|+..+++
T Consensus 89 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 150 (330)
T 3hym_B 89 NPVSWFAVGCYYLMVGHKNEHARRYLSKATT------------------LEKTYGPAWIAYGHSFAVESEHDQAMAAYFT 150 (330)
T ss_dssp STHHHHHHHHHHHHSCSCHHHHHHHHHHHHT------------------TCTTCTHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 4567888999999999 99999999999998 5666777899999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++.+.|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....++.+++.+
T Consensus 151 a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 214 (330)
T 3hym_B 151 AAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEK 214 (330)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999888777666543
No 129
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.30 E-value=1.5e-11 Score=111.83 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=72.0
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHH----HHHHhcCChHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSS----ACKLKLGDLKGALLD 286 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla----~~~~~l~~~~~Al~~ 286 (361)
....+..+|..+.+.|++++|+..|+++++. +|... ..+++ .++...|++++|+..
T Consensus 129 ~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~------------------~p~~~--~~~l~~a~~~l~~~~~~~~eA~~~ 188 (291)
T 3mkr_A 129 SLECMAMTVQILLKLDRLDLARKELKKMQDQ------------------DEDAT--LTQLATAWVSLAAGGEKLQDAYYI 188 (291)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------CTTCH--HHHHHHHHHHHHHCTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhh------------------CcCcH--HHHHHHHHHHHHhCchHHHHHHHH
Confidence 3567778888999999999999999999873 22221 11111 112233556666666
Q ss_pred HHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 018098 287 TEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHER 348 (361)
Q Consensus 287 ~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 348 (361)
++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+++.++..++.+...+++.
T Consensus 189 ~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~ 250 (291)
T 3mkr_A 189 FQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKP 250 (291)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Confidence 66666666666666666666666666666666666666666666666665555555444443
No 130
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.29 E-value=1.3e-11 Score=107.48 Aligned_cols=124 Identities=15% Similarity=0.131 Sum_probs=106.5
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHH---HHHHHHHHHHHHh------------
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTK---SQIFTNSSACKLK------------ 276 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~nla~~~~~------------ 276 (361)
...+..+|..+++.|+|++|+..|+++++ ..|.. ..+++++|.++.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~------------------~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~ 102 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIR------------------LNPTHPNIDYVMYMRGLTNMALDDSALQGFFGV 102 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCTTHHHHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH------------------HCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhcc
Confidence 46788999999999999999999999998 33332 3478888888876
Q ss_pred ------cCChHHHHHHHHHHhhcCCCchhhH-----------------hHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-
Q 018098 277 ------LGDLKGALLDTEFAMRDGDDNVKAL-----------------FRQGQAYMALNDVDAAVESFEKALKLEPNDG- 332 (361)
Q Consensus 277 ------l~~~~~Al~~~~~al~~~p~~~ka~-----------------~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~- 332 (361)
+|++++|+..++++++.+|++..++ +.+|.+|...|++++|+..|+++++..|+++
T Consensus 103 ~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~ 182 (225)
T 2yhc_A 103 DRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQA 182 (225)
T ss_dssp -----CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHH
T ss_pred chhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCc
Confidence 5789999999999999999997665 6789999999999999999999999999986
Q ss_pred --HHHHHHHHHHHHHHHHHHHHH
Q 018098 333 --GIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 333 --~~~~~l~~~~~~~~~~~~~~k 353 (361)
.++..++.+...+++..++.+
T Consensus 183 ~~~a~~~l~~~~~~~g~~~~A~~ 205 (225)
T 2yhc_A 183 TRDALPLMENAYRQMQMNAQAEK 205 (225)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCcHHHHH
Confidence 678888888888887776643
No 131
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.29 E-value=2.3e-11 Score=115.97 Aligned_cols=114 Identities=19% Similarity=0.255 Sum_probs=106.5
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..+++.|+|++|+..|+++++ ..|....++.++|.++..+|++++|+..+++
T Consensus 24 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 85 (450)
T 2y4t_A 24 ADVEKHLELGKKLLAAGQLADALSQFHAAVD------------------GDPDNYIAYYRRATVFLAMGKSKAALPDLTK 85 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hCCccHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3578899999999999999999999999998 6777889999999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG---GIKKELAVA 341 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~---~~~~~l~~~ 341 (361)
+++++|+++.+++.+|.+|..+|++++|+..|+++++++|++. .++..+..+
T Consensus 86 al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~ 140 (450)
T 2y4t_A 86 VIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKS 140 (450)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred HHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988 777666544
No 132
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.29 E-value=1.6e-11 Score=111.55 Aligned_cols=94 Identities=14% Similarity=0.095 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC---------CCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG---------DDNVKALFRQGQAYMALNDVDAAVESFEKALKLEP 329 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~---------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 329 (361)
..|....++.++|.++..+|++++|+..+++++.+. |.++.+++.+|.++..+|++++|+..|+++++++|
T Consensus 188 ~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 267 (330)
T 3hym_B 188 IAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIP 267 (330)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hCCCChHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCc
Confidence 344555667777777777777777777777777665 55566777777777777777777777777777777
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q 018098 330 NDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 330 ~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
++..++..++.+...+++.+++.
T Consensus 268 ~~~~~~~~la~~~~~~g~~~~A~ 290 (330)
T 3hym_B 268 QNASTYSAIGYIHSLMGNFENAV 290 (330)
T ss_dssp TCSHHHHHHHHHHHHHTCHHHHH
T ss_pred cchHHHHHHHHHHHHhccHHHHH
Confidence 77777777777777666665544
No 133
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.29 E-value=5.4e-11 Score=93.30 Aligned_cols=89 Identities=20% Similarity=0.178 Sum_probs=84.0
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKI 345 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 345 (361)
.++++|.++++.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..++..++.+....
T Consensus 19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~ 98 (121)
T 1hxi_A 19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE 98 (121)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 018098 346 HERREQEKK 354 (361)
Q Consensus 346 ~~~~~~~k~ 354 (361)
++.+++...
T Consensus 99 g~~~~A~~~ 107 (121)
T 1hxi_A 99 HNANAALAS 107 (121)
T ss_dssp HHHHHHHHH
T ss_pred CCHHHHHHH
Confidence 888776643
No 134
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.29 E-value=2.5e-11 Score=112.41 Aligned_cols=118 Identities=16% Similarity=0.161 Sum_probs=108.2
Q ss_pred HhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHH--HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 018098 217 VFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT--KSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (361)
Q Consensus 217 ~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~ 294 (361)
..|..+ ..|++++|+..|+++++ ..|. ...++.++|.++..+|++++|+..+++++.++
T Consensus 187 ~~~~~~-~~~~~~~A~~~~~~a~~------------------~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 247 (368)
T 1fch_A 187 ILGSLL-SDSLFLEVKELFLAAVR------------------LDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR 247 (368)
T ss_dssp TTHHHH-HHHHHHHHHHHHHHHHH------------------HSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHh-hcccHHHHHHHHHHHHH------------------hCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 455554 89999999999999998 6666 67899999999999999999999999999999
Q ss_pred CCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 295 DDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 295 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
|+++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+...+++.+++..
T Consensus 248 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 306 (368)
T 1fch_A 248 PNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVE 306 (368)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999988887766554
No 135
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.28 E-value=2.8e-11 Score=94.49 Aligned_cols=102 Identities=30% Similarity=0.462 Sum_probs=94.5
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
...+..+|..++..|++++|+..|++++. ..|....++.++|.++...|++++|+..+++++
T Consensus 35 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~ 96 (136)
T 2fo7_A 35 AEAWYNLGNAYYKQGDYDEAIEYYQKALE------------------LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKAL 96 (136)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------HCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 45677889999999999999999999998 556667789999999999999999999999999
Q ss_pred hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 018098 292 RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND 331 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~ 331 (361)
...|.+..+++.+|.++..+|++++|+..|+++++++|.+
T Consensus 97 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 97 ELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999999863
No 136
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.26 E-value=3e-11 Score=116.17 Aligned_cols=127 Identities=17% Similarity=0.146 Sum_probs=104.2
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|.+++..|+|++|+++|++|+++.+.....+ .++.....|.|+|.+|..+|++++|+.+++++
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~---------~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka 120 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQ---------AEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKV 120 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGG---------CTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccc---------cchHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 367788899999999999999999999999654321111 24455678999999999999999999999999
Q ss_pred hhcC--------CCchhhHhHHHHHHHhc--CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 018098 291 MRDG--------DDNVKALFRQGQAYMAL--NDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 291 l~~~--------p~~~ka~~~~a~a~~~l--~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 346 (361)
+++. +..+.++..+|.++..+ ++|++|+.+|+++++++|+++.++..++.+...+.
T Consensus 121 ~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~ 186 (472)
T 4g1t_A 121 KHVCEKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLD 186 (472)
T ss_dssp HHHHHHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHhHhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 9763 34577888888887665 57999999999999999999999988887765554
No 137
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.26 E-value=7.1e-11 Score=86.49 Aligned_cols=83 Identities=31% Similarity=0.456 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
....++.++|.++..++++++|+..++++++++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..++.+
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 86 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNA 86 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHH
Q 018098 342 KKK 344 (361)
Q Consensus 342 ~~~ 344 (361)
...
T Consensus 87 ~~~ 89 (91)
T 1na3_A 87 KQK 89 (91)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 138
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.25 E-value=5.1e-11 Score=98.12 Aligned_cols=94 Identities=16% Similarity=0.134 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 018098 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAV 340 (361)
Q Consensus 261 ~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~ 340 (361)
+.....+.++|.+++..|+|++|+..++++++++|.++.+|+++|.+|..+|++++|+.+|+++++++|++..++..++.
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 87 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGL 87 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 018098 341 AKKKIHERREQEKK 354 (361)
Q Consensus 341 ~~~~~~~~~~~~k~ 354 (361)
+...+++.+++.+.
T Consensus 88 ~~~~~g~~~~A~~~ 101 (164)
T 3sz7_A 88 ARFDMADYKGAKEA 101 (164)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHHHccCHHHHHHH
Confidence 99998887766543
No 139
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.25 E-value=3e-11 Score=109.52 Aligned_cols=132 Identities=16% Similarity=0.077 Sum_probs=107.8
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~ 288 (361)
.+.+..+...|+.+...|+|++|+.+|.+|+++.... ...+....+|.++|.+|.++|++++|+.+++
T Consensus 34 ~~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~ 101 (292)
T 1qqe_A 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKA------------GNEDEAGNTYVEAYKCFKSGGNSVNAVDSLE 101 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh------------CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 3355667777888999999999999999999843221 0123457789999999999999999999999
Q ss_pred HHhhcCCCc------hhhHhHHHHHHHhc-CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHH
Q 018098 289 FAMRDGDDN------VKALFRQGQAYMAL-NDVDAAVESFEKALKLEPND------GGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 289 ~al~~~p~~------~ka~~~~a~a~~~l-~~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+|+.+.|.. +.++.++|.+|..+ |++++|+.+|++|+++.|.+ ..++..++.+...+++.+++.
T Consensus 102 ~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~ 178 (292)
T 1qqe_A 102 NAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEAS 178 (292)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 999988754 57899999999995 99999999999999998864 356777788877777766654
No 140
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.24 E-value=7.7e-11 Score=89.62 Aligned_cols=84 Identities=12% Similarity=0.152 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKK 336 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~ 336 (361)
...++.++|.++..+|+|++|+..++++++++|.++.+++++|.++..+|++++|+..|+++++++|++ ..++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999999999999999999999999999998 66677
Q ss_pred HHHHHHHHHH
Q 018098 337 ELAVAKKKIH 346 (361)
Q Consensus 337 ~l~~~~~~~~ 346 (361)
.++.+...++
T Consensus 83 ~~~~~~~~~~ 92 (111)
T 2l6j_A 83 RLELAQGAVG 92 (111)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7776666554
No 141
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.24 E-value=5.9e-12 Score=116.84 Aligned_cols=112 Identities=18% Similarity=0.173 Sum_probs=102.6
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCc-------
Q 018098 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN------- 297 (361)
Q Consensus 225 ~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~------- 297 (361)
.++|++|+..|++++. .+|....++.++|.+++++|+|++|+..|++|+.++|.+
T Consensus 126 L~~~~~A~~~~~~a~~------------------~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~ 187 (336)
T 1p5q_A 126 LKSFEKAKESWEMNSE------------------EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEE 187 (336)
T ss_dssp EEEEECCCCGGGCCHH------------------HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHH
T ss_pred EeecccccchhcCCHH------------------HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHH
Confidence 4567778888888887 889999999999999999999999999999999999999
Q ss_pred --------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 298 --------VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 298 --------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
..+|+++|.+|..+|++++|+.+|+++++++|++..++..++.+...+++.+++...
T Consensus 188 ~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~ 252 (336)
T 1p5q_A 188 AQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARAD 252 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHH
Confidence 699999999999999999999999999999999999999999999888877766543
No 142
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.24 E-value=2.5e-11 Score=120.29 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=87.6
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHH
Q 018098 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQ 304 (361)
Q Consensus 225 ~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~ 304 (361)
.|++++|+..|+++++ .+|....++.++|.++..+|++++|+..++++++++|++..+++.+
T Consensus 2 ~g~~~~A~~~~~~al~------------------~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 63 (568)
T 2vsy_A 2 TADGPRELLQLRAAVR------------------HRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARL 63 (568)
T ss_dssp -------------------------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHH
T ss_pred CccHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4789999999999998 7888889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 305 GQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 305 a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
|.++..+|++++|+..|+++++++|++..++..++.+...+++.+++.+
T Consensus 64 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 112 (568)
T 2vsy_A 64 GRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAA 112 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 9999999999999999999999999999999999999988887766554
No 143
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.23 E-value=5.1e-11 Score=97.43 Aligned_cols=92 Identities=18% Similarity=0.181 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-------chh-----hHhHHHHHHHhcCCHHHHHHHHHHHHHh---
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDD-------NVK-----ALFRQGQAYMALNDVDAAVESFEKALKL--- 327 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~-------~~k-----a~~~~a~a~~~l~~~~~A~~~~~~al~l--- 327 (361)
.+..+.++|.+++++|+|++|+..|++||+++|+ +.. +|+++|.++..+|+|++|+.+|++|+++
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 5567899999999999999999999999999999 433 9999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHHHHHHHHHHH
Q 018098 328 ----EPNDGGIK----KELAVAKKKIHERREQEKK 354 (361)
Q Consensus 328 ----~P~~~~~~----~~l~~~~~~~~~~~~~~k~ 354 (361)
+|++..++ ..++.+...+++.+++...
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~ 124 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPE 124 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHH
Confidence 99999999 9999999998888776544
No 144
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.22 E-value=5.8e-11 Score=105.10 Aligned_cols=109 Identities=12% Similarity=0.065 Sum_probs=95.4
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~ 288 (361)
...+..+..+|..+...|+|++|+.+|.+++++...... ..+|....++.++|.++..+|++++|+..++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 151 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG----------KFHPDVAKQLNNLALLCQNQGKAEEVEYYYR 151 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC----------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcC----------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345778899999999999999999999999984321100 0146778899999999999999999999999
Q ss_pred HHhhc--------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh
Q 018098 289 FAMRD--------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL 327 (361)
Q Consensus 289 ~al~~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 327 (361)
+++.+ +|....+++.+|.++..+|++++|+..|++++++
T Consensus 152 ~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 152 RALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 99998 7888999999999999999999999999999987
No 145
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.22 E-value=4.2e-11 Score=90.50 Aligned_cols=83 Identities=18% Similarity=0.177 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN--DGGIKK 336 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~--~~~~~~ 336 (361)
.+|.+..+++++|.+|..+|+|++|+..++++++++|+++.+|+.+|.+|..+|++++|+..|++++++.|. +.....
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 81 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLS 81 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHH
Confidence 356778899999999999999999999999999999999999999999999999999999999999999875 344444
Q ss_pred HHHHH
Q 018098 337 ELAVA 341 (361)
Q Consensus 337 ~l~~~ 341 (361)
.+..+
T Consensus 82 ~l~~~ 86 (100)
T 3ma5_A 82 ELQDA 86 (100)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44443
No 146
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.21 E-value=4.8e-11 Score=116.27 Aligned_cols=144 Identities=13% Similarity=0.012 Sum_probs=103.3
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc---------cccCCCCccc------hhHHHHHHHHHHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC---------WEKEGIDEGK------SSSLRKTKSQIFTNSSAC 273 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~---------~~~~~~~~~~------~~~~~~~~~~~~~nla~~ 273 (361)
...+..+..+|..++..|++++|+..|++++...+.. ........+- .....|....++.++|.+
T Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 319 (537)
T 3fp2_A 240 ENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPTPNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQM 319 (537)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCCchHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence 3446677777777778888888888887777643210 0000000000 012455667778888888
Q ss_pred HHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 274 KLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 274 ~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+..+|++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|++..++..++.+....++.+++.
T Consensus 320 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 398 (537)
T 3fp2_A 320 YFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAI 398 (537)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHH
Confidence 8888888888888888888888888888888888888888888888888888888888888888888877776665544
No 147
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.21 E-value=9.9e-11 Score=106.15 Aligned_cols=115 Identities=14% Similarity=0.162 Sum_probs=107.1
Q ss_pred hhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhh
Q 018098 221 EHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKA 300 (361)
Q Consensus 221 ~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka 300 (361)
.+...|++++|+..|+++++ ..|....++.++|.++..+|++++|+..+++++.++|+++.+
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~------------------~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~ 208 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALE------------------MNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQL 208 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHH------------------HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHcccHHHHHHHHHHHHh------------------hCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHH
Confidence 58889999999999999998 666778899999999999999999999999999999999999
Q ss_pred HhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 301 LFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 301 ~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++.+|.++..+|++++|+..|+++++++|.+..++..++.+...+++.+++.+
T Consensus 209 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 261 (327)
T 3cv0_A 209 WNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAK 261 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHH
Confidence 99999999999999999999999999999999999999999888877766543
No 148
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.21 E-value=8.2e-11 Score=106.85 Aligned_cols=96 Identities=10% Similarity=0.049 Sum_probs=89.2
Q ss_pred HhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhH
Q 018098 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFR 303 (361)
Q Consensus 224 ~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~ 303 (361)
..|++++|+..|+++++ ..|.+..+++++|.++.++|++++|+..++++|+++|+++.++++
T Consensus 178 ~~~~~~eA~~~~~~~l~------------------~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~ 239 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMAD------------------KCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLIN 239 (291)
T ss_dssp CTTHHHHHHHHHHHHHH------------------HSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CchHHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 45899999999999998 677788999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHH-HHHHHHHHHHhCCCCHHHHHH
Q 018098 304 QGQAYMALNDVDA-AVESFEKALKLEPNDGGIKKE 337 (361)
Q Consensus 304 ~a~a~~~l~~~~~-A~~~~~~al~l~P~~~~~~~~ 337 (361)
+|.++..+|++++ +..+++++++++|+++.+...
T Consensus 240 l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d~ 274 (291)
T 3mkr_A 240 LVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEY 274 (291)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHHH
Confidence 9999999999976 568999999999999987654
No 149
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.20 E-value=9.4e-11 Score=114.21 Aligned_cols=127 Identities=17% Similarity=0.090 Sum_probs=106.9
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~ 294 (361)
+...+..++..|.+-.....|.+|+.++..+. ..+|. ..++.++|.++..+|++++|+..+++++.++
T Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~-----------~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~ 306 (537)
T 3fp2_A 239 RENAALALCYTGIFHFLKNNLLDAQVLLQESI-----------NLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLN 306 (537)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH-----------HHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH-----------hcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccC
Confidence 44455666777777666677788888665432 23344 6789999999999999999999999999999
Q ss_pred CCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 295 DDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 295 p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
|+++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.+....++.+++..
T Consensus 307 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 365 (537)
T 3fp2_A 307 PEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEA 365 (537)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999888877766544
No 150
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.20 E-value=1.3e-10 Score=109.09 Aligned_cols=133 Identities=11% Similarity=0.076 Sum_probs=109.9
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|++++|+.+|.+|+++.+.. ....+....++.++|.+|..+|+|++|+.++++
T Consensus 141 ~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-----------~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 209 (383)
T 3ulq_A 141 EKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-----------EAYNIRLLQCHSLFATNFLDLKQYEDAISHFQK 209 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-----------STTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-----------ccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 367888999999999999999999999999865432 002556778999999999999999999999999
Q ss_pred HhhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHH-----hC-CCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALK-----LE-PNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 290 al~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~-----l~-P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
|+++.+.. ..+++++|.+|..+|++++|+.+|+++++ .+ |....++..++.+...+++.+++.+
T Consensus 210 al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 285 (383)
T 3ulq_A 210 AYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHE 285 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHH
Confidence 99886543 36899999999999999999999999999 45 6677788888888887776655543
No 151
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.19 E-value=1.8e-10 Score=92.90 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=106.5
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+.+|++++++.+.. ........++.++|.++..+|++++|+.++++
T Consensus 7 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 74 (164)
T 3ro3_A 7 AQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF------------GDKAAERIAYSNLGNAYIFLGEFETASEYYKK 74 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh------------CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 467889999999999999999999999999955321 01223456899999999999999999999999
Q ss_pred HhhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 290 al~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++.+.+.. ..+++.+|.++..+|++++|+..+++++++.+.. ..+...++.+...+++.+++.+
T Consensus 75 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 150 (164)
T 3ro3_A 75 TLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH 150 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHH
Confidence 99876543 6789999999999999999999999999885422 3456677777777666655443
No 152
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.19 E-value=9.8e-12 Score=93.19 Aligned_cols=89 Identities=18% Similarity=0.121 Sum_probs=53.3
Q ss_pred HhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHH-HHHHHHHHHHhcCChHHHHHHHHHHhhcCC
Q 018098 217 VFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQ-IFTNSSACKLKLGDLKGALLDTEFAMRDGD 295 (361)
Q Consensus 217 ~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~nla~~~~~l~~~~~Al~~~~~al~~~p 295 (361)
..|..++..|+|++|+..|+++++ .+|.+.. ++.++|.+|..+|++++|+.+++++++++|
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p 66 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQ------------------TEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNP 66 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHH------------------HCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHH------------------HCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC
Confidence 455556666666666666666665 4455555 666666666666666666666666666666
Q ss_pred CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 018098 296 DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND 331 (361)
Q Consensus 296 ~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~ 331 (361)
++..++++ +.+.+|+..|++++.++|++
T Consensus 67 ~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 67 DSPALQAR--------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp TSTHHHHH--------HHHHHHHHHHCCTTHHHHCC
T ss_pred CcHHHHHH--------HHHHHHHHHHHHHhccCccc
Confidence 66655533 44555566666655555543
No 153
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.18 E-value=1.5e-10 Score=91.69 Aligned_cols=95 Identities=11% Similarity=0.050 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
.++.....+.++|.+++..|+|++|+..+++++.++|.++.+++.+|.++..+|++++|+..|+++++++|++..++..+
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 83 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFL 83 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHH
Confidence 34456778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 018098 339 AVAKKKIHERREQEK 353 (361)
Q Consensus 339 ~~~~~~~~~~~~~~k 353 (361)
+.+...+++.+++.+
T Consensus 84 ~~~~~~~~~~~~A~~ 98 (137)
T 3q49_B 84 GQCQLEMESYDEAIA 98 (137)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHHhhHHHHHH
Confidence 999988877766543
No 154
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.17 E-value=2.6e-10 Score=110.88 Aligned_cols=143 Identities=10% Similarity=0.007 Sum_probs=113.8
Q ss_pred chHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHH
Q 018098 204 ELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGA 283 (361)
Q Consensus 204 ~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~A 283 (361)
........+....+.+..+..+|+|++|+..|+++|++....... .+|.....+.|||.+|..+|+|++|
T Consensus 301 ~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~----------~Hp~~a~~~~nLa~~y~~~g~~~eA 370 (490)
T 3n71_A 301 VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFAD----------TNLYVLRLLSIASEVLSYLQAYEEA 370 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCT----------TSHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCC----------CCHHHHHHHHHHHHHHHHhcCHHHH
Confidence 344555667777778888889999999999999999966543211 4677889999999999999999999
Q ss_pred HHHHHHHhhc--------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHHHHHHHHHH
Q 018098 284 LLDTEFAMRD--------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL-----EPNDGGI---KKELAVAKKKIHE 347 (361)
Q Consensus 284 l~~~~~al~~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-----~P~~~~~---~~~l~~~~~~~~~ 347 (361)
+..++++|++ +|+-...+.++|.+|..+|+|++|+..|++|+++ -|+++.+ ...+..++..++.
T Consensus 371 ~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 450 (490)
T 3n71_A 371 SHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRM 450 (490)
T ss_dssp HHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHH
Confidence 9999999954 3445789999999999999999999999999985 4666544 4566677777777
Q ss_pred HHHHHHHHH
Q 018098 348 RREQEKKQY 356 (361)
Q Consensus 348 ~~~~~k~~~ 356 (361)
+++++...+
T Consensus 451 ~~~ae~~~~ 459 (490)
T 3n71_A 451 FRQNEFMYH 459 (490)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766665443
No 155
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.16 E-value=2.4e-11 Score=117.52 Aligned_cols=113 Identities=15% Similarity=0.165 Sum_probs=102.4
Q ss_pred HhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCc------
Q 018098 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN------ 297 (361)
Q Consensus 224 ~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~------ 297 (361)
..++|++|+..|.+++. ..+....++.++|.+++++++|++|+..|++||+++|.+
T Consensus 246 ~l~~~~~A~~~~~~~~~------------------~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~ 307 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTK------------------EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEK 307 (457)
T ss_dssp EEEEEECCCCGGGSCHH------------------HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHH
T ss_pred hhhhcccCcchhhcCHH------------------HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChH
Confidence 44567777777777776 788999999999999999999999999999999999998
Q ss_pred ---------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 298 ---------VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 298 ---------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
..+|+++|.+|..+|+|++|+.+|+++++++|++..++..++.+...+.+.+++.+.
T Consensus 308 ~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~ 373 (457)
T 1kt0_A 308 ESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGD 373 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHH
Confidence 699999999999999999999999999999999999999999999998888776543
No 156
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.16 E-value=1e-10 Score=85.63 Aligned_cols=84 Identities=26% Similarity=0.323 Sum_probs=78.1
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|+++++ ..|....++.++|.++.++|++++|+..++++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALE------------------LDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 69 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHh------------------cCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 467889999999999999999999999998 66777889999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcC
Q 018098 291 MRDGDDNVKALFRQGQAYMALN 312 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~ 312 (361)
++++|.+..+++.+|.++..+|
T Consensus 70 ~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 70 LELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHCTTCHHHHHHHHHHHHHHC
T ss_pred HhcCCCCHHHHHHHHHHHHhcC
Confidence 9999999999999999988764
No 157
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.16 E-value=2.1e-10 Score=113.41 Aligned_cols=125 Identities=14% Similarity=0.024 Sum_probs=109.7
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+.+.|++++|+..|+++++ ..|.+..+|++++.+|.+.|++++|+..++++
T Consensus 372 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~ 433 (597)
T 2xpi_A 372 KAVTWLAVGIYYLCVNKISEARRYFSKSST------------------MDPQFGPAWIGFAHSFAIEGEHDQAISAYTTA 433 (597)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 356777788888899999999999999887 66777788999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
+..+|.+..+++.+|.+|...|++++|+..|+++++++|.+..++..++.+..+.++.+++.+
T Consensus 434 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 496 (597)
T 2xpi_A 434 ARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAIN 496 (597)
T ss_dssp HHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999888887776655543
No 158
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=2.8e-10 Score=102.35 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=112.4
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+.+|++++++...... ...+....++.++|.++..+|++++|+..+++
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~----------~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 178 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLG----------KDHPDVAKQLNNLALLCQNQGKYEEVEYYYQR 178 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHC----------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcC----------CCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 35778899999999999999999999999984321100 01367788999999999999999999999999
Q ss_pred Hhhc--------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh----------------------------------
Q 018098 290 AMRD--------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL---------------------------------- 327 (361)
Q Consensus 290 al~~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l---------------------------------- 327 (361)
++.+ +|....+++.+|.++..+|++++|+..|++++++
T Consensus 179 a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (311)
T 3nf1_A 179 ALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGT 258 (311)
T ss_dssp HHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------C
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHH
Confidence 9998 7778899999999999999999999999999985
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 328 ---------------EPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 328 ---------------~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
+|.+..++..++.+....++.+++.+
T Consensus 259 ~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 299 (311)
T 3nf1_A 259 SFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAET 299 (311)
T ss_dssp CSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHH
Confidence 35566778888888888877766554
No 159
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=2.6e-10 Score=102.56 Aligned_cols=133 Identities=17% Similarity=0.112 Sum_probs=112.4
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+.+|++++.+...... ...+....++.++|.+|..+|++++|+..++++
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 137 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLG----------KDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRA 137 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHC----------TTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhC----------CCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 4677889999999999999999999999984421100 013677889999999999999999999999999
Q ss_pred hhcC--------CCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDG--------DDNVKALFRQGQAYMALNDVDAAVESFEKALKL--------EPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~--------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--------~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
+++. |....+++.+|.++..+|++++|+..|++++++ +|....++..++.+....++.+++.+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 216 (311)
T 3nf1_A 138 LEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAET 216 (311)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 9874 667889999999999999999999999999998 66677788888888888877766543
No 160
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.3e-10 Score=110.51 Aligned_cols=115 Identities=17% Similarity=0.188 Sum_probs=97.4
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHH------HHHHHHHHHHHh---cCChHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKS------QIFTNSSACKLK---LGDLKG 282 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~nla~~~~~---l~~~~~ 282 (361)
...+..+|..++..|++++|+..|++++. ..|... .++.++|.++.. +|++++
T Consensus 372 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 433 (514)
T 2gw1_A 372 PEVPNFFAEILTDKNDFDKALKQYDLAIE------------------LENKLDGIYVGIAPLVGKATLLTRNPTVENFIE 433 (514)
T ss_dssp SHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH------------------hhhccchHHHHHHHHHHHHHHHhhhhhcCCHHH
Confidence 44556667777777777777777777776 555543 389999999999 999999
Q ss_pred HHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 283 ALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 283 Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
|+..+++++.++|+++.+++.+|.++..+|++++|+..|+++++++|+++.++..+..+...
T Consensus 434 A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~ 495 (514)
T 2gw1_A 434 ATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAITFAEAA 495 (514)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888877655443
No 161
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.13 E-value=1.7e-10 Score=97.97 Aligned_cols=96 Identities=15% Similarity=0.083 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCch----------------hhHhHHHHHHHhcCCHHHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNV----------------KALFRQGQAYMALNDVDAAVESFE 322 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~----------------ka~~~~a~a~~~l~~~~~A~~~~~ 322 (361)
..+.....+.++|.+++..|+|++|+..+++++.+.|.++ .+++++|.++..+|++++|+.+|+
T Consensus 33 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 33 EKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 5667788899999999999999999999999999999887 899999999999999999999999
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 323 KALKLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 323 ~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
++++++|.+..++..++.+...+++.+++.+.
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~ 144 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKEN 144 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHH
Confidence 99999999999999999999888887765543
No 162
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.12 E-value=1.9e-10 Score=104.15 Aligned_cols=107 Identities=10% Similarity=0.077 Sum_probs=92.7
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+.+|++|+.+..... ...+....+++|+|.+|.++|+|++|+.++++|
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~a 222 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALH-----------DNEEFDVKVRYNHAKALYLDSRYEESLYQVNKA 222 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSS-----------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc-----------cchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 466799999999999999999999999998554320 134567789999999999999999999999999
Q ss_pred hhcCCCc------hhhHhHHHHHHHhcC-CHHHHHHHHHHHHHhC
Q 018098 291 MRDGDDN------VKALFRQGQAYMALN-DVDAAVESFEKALKLE 328 (361)
Q Consensus 291 l~~~p~~------~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~ 328 (361)
+++.+.. +.+++++|.++..+| .+++|+.+|++|+.+.
T Consensus 223 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 223 IEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 9886544 789999999999999 5799999999999874
No 163
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.12 E-value=1.4e-10 Score=105.82 Aligned_cols=108 Identities=14% Similarity=0.002 Sum_probs=73.7
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+.++|..+...|+|++|+.+|++|+.+..... .......++.++|.+|.. |++++|+.++++|
T Consensus 75 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g------------~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~A 141 (307)
T 2ifu_A 75 AAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG------------TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQA 141 (307)
T ss_dssp HHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT------------CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC------------CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHH
Confidence 355677778888888888888888888887432110 012334567777777777 7777777777777
Q ss_pred hhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 018098 291 MRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEPND 331 (361)
Q Consensus 291 l~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~ 331 (361)
+.+.|.. ..++.++|.+|..+|+|++|+..|++++++.|.+
T Consensus 142 l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 142 AAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 7766543 4667777777777777777777777777776543
No 164
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.11 E-value=4.5e-10 Score=111.04 Aligned_cols=142 Identities=16% Similarity=0.143 Sum_probs=95.3
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccc-----------cCCCCcc-----chhHHHHHHHHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE-----------KEGIDEG-----KSSSLRKTKSQIFTNSSACK 274 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~-----------~~~~~~~-----~~~~~~~~~~~~~~nla~~~ 274 (361)
....+..+|..+.+.|++++|++.|+++++..+.... ....... ......|.+..+|.+++.+|
T Consensus 406 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 485 (597)
T 2xpi_A 406 FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVA 485 (597)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHH
Confidence 3667778888888888888888888887763221000 0000000 00112334556677788888
Q ss_pred HhcCChHHHHHHHHHHhhc------CCCc-hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 275 LKLGDLKGALLDTEFAMRD------GDDN-VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 275 ~~l~~~~~Al~~~~~al~~------~p~~-~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
.+.|++++|+..+++++++ +|++ ..+|..+|.++...|++++|+..|+++++++|++..++..++.+....++
T Consensus 486 ~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~ 565 (597)
T 2xpi_A 486 FNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKI 565 (597)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTC
T ss_pred HHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCC
Confidence 8888888888888888776 5554 67778888888888888888888888888888888888888777777666
Q ss_pred HHHHH
Q 018098 348 RREQE 352 (361)
Q Consensus 348 ~~~~~ 352 (361)
.+++.
T Consensus 566 ~~~A~ 570 (597)
T 2xpi_A 566 PGLAI 570 (597)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65544
No 165
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.11 E-value=6.2e-10 Score=87.03 Aligned_cols=94 Identities=16% Similarity=0.171 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 018098 260 RKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELA 339 (361)
Q Consensus 260 ~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~ 339 (361)
.+....++.++|.++...|++++|+..++++++.+|.+..+++.+|.++..+|++++|+..|+++++++|.+..++..++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 018098 340 VAKKKIHERREQEK 353 (361)
Q Consensus 340 ~~~~~~~~~~~~~k 353 (361)
.+...+++.+++.+
T Consensus 92 ~~~~~~~~~~~A~~ 105 (133)
T 2lni_A 92 AALEAMKDYTKAMD 105 (133)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHHhhHHHHHH
Confidence 99888877766543
No 166
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.11 E-value=5.2e-11 Score=90.21 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CHHHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN--DGGIKKELAV 340 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~--~~~~~~~l~~ 340 (361)
...++.++|.++...|++++|+..++++++++|.+..+++.+|.++..+|++++|+..|+++++++|. +..++..++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~ 84 (112)
T 2kck_A 5 NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKAD 84 (112)
T ss_dssp STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHH
Confidence 44578899999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHH-HHHHHHHH
Q 018098 341 AKKKI-HERREQEK 353 (361)
Q Consensus 341 ~~~~~-~~~~~~~k 353 (361)
+...+ ++.+++.+
T Consensus 85 ~~~~~~~~~~~A~~ 98 (112)
T 2kck_A 85 ALRYIEGKEVEAEI 98 (112)
T ss_dssp HHTTCSSCSHHHHH
T ss_pred HHHHHhCCHHHHHH
Confidence 98888 76655443
No 167
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.10 E-value=3.7e-10 Score=95.39 Aligned_cols=130 Identities=10% Similarity=0.031 Sum_probs=105.5
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+.+|++++.+.... ...+....++.++|.++..+|++++|+.++.++
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 92 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKS------------GDHTAEHRALHQVGMVERMAGNWDAARRCFLEE 92 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc------------CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 47788999999999999999999999999966432 134567789999999999999999999999999
Q ss_pred hhc---CC----CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC--CH----HHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRD---GD----DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN--DG----GIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 291 l~~---~p----~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~--~~----~~~~~l~~~~~~~~~~~~~~ 352 (361)
+.+ .+ ....+++++|.++..+|++++|+..+++++++.+. +. .+...++.+....++.+++.
T Consensus 93 l~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 167 (203)
T 3gw4_A 93 RELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQ 167 (203)
T ss_dssp HHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 988 33 34678999999999999999999999999987532 22 23466777766666655544
No 168
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.10 E-value=4.1e-10 Score=92.41 Aligned_cols=93 Identities=18% Similarity=0.155 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc------------------CCCchhhHhHHHHHHHhcCCHHHHHHHHHH
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRD------------------GDDNVKALFRQGQAYMALNDVDAAVESFEK 323 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~------------------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~ 323 (361)
..+..+.++|..+++.|+|++|+..|++||.+ +|.++.+|+++|.+|..+|+|++|+.++++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 35678899999999999999999999999999 788889999999999999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 324 ALKLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 324 al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
+++++|++..++..++.+...+++.+++...
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~ 119 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEED 119 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHH
Confidence 9999999999999999999998888776543
No 169
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.10 E-value=3.5e-10 Score=103.23 Aligned_cols=108 Identities=13% Similarity=0.047 Sum_probs=91.5
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+.. |+|++|+.+|++|+++.+.. ........++.++|.+|.++|+|++|+.+++++
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~------------~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 181 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE------------ERLRQAAELIGKASRLLVRQQKFDEAAASLQKE 181 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC------------CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 46788899999998 99999999999999954311 011234678999999999999999999999999
Q ss_pred hhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 018098 291 MRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG 332 (361)
Q Consensus 291 l~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~ 332 (361)
+.+.|.+ ..+++.+|.++..+|++++|+..|++++ ++|...
T Consensus 182 l~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 182 KSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 9987654 3588899999999999999999999999 999754
No 170
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.10 E-value=2.8e-10 Score=103.77 Aligned_cols=120 Identities=11% Similarity=0.071 Sum_probs=81.7
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHH-HHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQ-IFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
+..+...|..+...|++++|+..|+++++ +.|.+.. +|.+++.++.++|++++|+..+++|
T Consensus 99 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 160 (308)
T 2ond_A 99 MLLYFAYADYEESRMKYEKVHSIYNRLLA------------------IEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 160 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT------------------SSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHh------------------ccccCccHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 45677788888888888888888888887 3333333 6777777777777777777777777
Q ss_pred hhcCCCchhhHhHHHHHHH-hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDNVKALFRQGQAYM-ALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~-~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 349 (361)
++++|.+..+|...+.... .+|++++|+..|+++++++|++..++..++.+....++.+
T Consensus 161 ~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~ 220 (308)
T 2ond_A 161 REDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDN 220 (308)
T ss_dssp HTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHH
T ss_pred HhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHH
Confidence 7777766666655544432 2577777777777777777777777666666655544443
No 171
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.08 E-value=8.6e-10 Score=109.35 Aligned_cols=119 Identities=6% Similarity=-0.086 Sum_probs=111.8
Q ss_pred HhhhHHHHHhcchhHHhhh----------HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcC
Q 018098 209 MNAVDSIKVFGNEHYKKQD----------YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG 278 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~----------y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~ 278 (361)
.+...+|..+|..+...++ |++|++.|.++++ .+|.+..+|++++.+..+++
T Consensus 60 P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~------------------~~pK~y~aW~hR~w~l~~l~ 121 (567)
T 1dce_A 60 PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR------------------VNPKSYGTWHHRCWLLSRLP 121 (567)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTCS
T ss_pred chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcc
Confidence 3346788889999998888 9999999999999 89999999999999999999
Q ss_pred --ChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 018098 279 --DLKGALLDTEFAMRDGDDNVKALFRQGQAYMALN-DVDAAVESFEKALKLEPNDGGIKKELAVAKKKI 345 (361)
Q Consensus 279 --~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 345 (361)
+|++++..|+++|++||.|..||+.|+.++..++ .+++|+++++++++++|.|..+|..++.+...+
T Consensus 122 ~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 122 EPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp SCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHHHHhh
Confidence 7799999999999999999999999999999999 999999999999999999999999999998775
No 172
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.08 E-value=3.7e-10 Score=92.03 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=89.3
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|+++++ ..|....++.++|.++..+|++++|+..++++
T Consensus 46 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~------------------~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 107 (166)
T 1a17_A 46 NAIYYGNRSLAYLRTECYGYALGDATRAIE------------------LDKKYIKGYYRRAASNMALGKFRAALRDYETV 107 (166)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCcccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 366788999999999999999999999999 67777889999999999999999999999999
Q ss_pred hhcCCCchhhHhHH--HHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 291 MRDGDDNVKALFRQ--GQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 291 l~~~p~~~ka~~~~--a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
+.++|.+..++..+ +..+..+|++++|+..++++..+.
T Consensus 108 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 108 VKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHh
Confidence 99999998888554 445888999999999999886653
No 173
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.08 E-value=3.9e-10 Score=102.00 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=100.5
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..++..++|++|+.+|++|+.+.... . .......++.++|.+|..+|+|++|+.++++|+
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~---~---------~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al 182 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTG---I---------DVYQNLYIENAIANIYAENGYLKKGIDLFEQIL 182 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCC---S---------CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhccc---c---------cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4455568988899999999999999999843211 0 011345689999999999999999999999999
Q ss_pred h-------cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHH
Q 018098 292 R-------DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKKELAVAKKKIHE 347 (361)
Q Consensus 292 ~-------~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~ 347 (361)
+ ..+..+.+++++|.+|..+|+|++|+.++++++++.+.. ..++..++.+...+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 251 (293)
T 3u3w_A 183 KQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEY 251 (293)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCC
Confidence 4 223346799999999999999999999999999987654 6788889988888874
No 174
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.08 E-value=7.5e-10 Score=103.75 Aligned_cols=132 Identities=15% Similarity=0.016 Sum_probs=104.3
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|++++|+.+|++|+++.+... ...+....++.++|.+|..+|+|++|+.++++
T Consensus 139 ~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~-----------~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~ 207 (378)
T 3q15_A 139 EKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHP-----------LYSIRTIQSLFVIAGNYDDFKHYDKALPHLEA 207 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTST-----------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCC-----------CchhhHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 4577788888888888888888888888888553210 01345677889999999999999999999999
Q ss_pred HhhcCC------CchhhHhHHHHHHHhcCCHHHHHHHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGD------DNVKALFRQGQAYMALNDVDAAVESFEKALK-----LEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 290 al~~~p------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~-----l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
|+++.+ ....+++++|.+|..+|++++|+.+|+++++ .+|....+...++.+...+++.+++.
T Consensus 208 al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 281 (378)
T 3q15_A 208 ALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAF 281 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHH
Confidence 997643 1256888999999999999999999999999 67777778888888888777666554
No 175
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.07 E-value=6e-10 Score=104.46 Aligned_cols=127 Identities=13% Similarity=0.119 Sum_probs=105.6
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~ 294 (361)
+...|..++..|+|++|+.+|++|+.++... ...+....++.++|.+|..+|++++|+.++.+|+++.
T Consensus 106 ~~~~g~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 173 (383)
T 3ulq_A 106 NFFRGMYELDQREYLSAIKFFKKAESKLIFV------------KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIY 173 (383)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTGGGC------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhC------------CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 3449999999999999999999999965432 1245577899999999999999999999999999884
Q ss_pred CC-------chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHHHHHHHHH
Q 018098 295 DD-------NVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG------GIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 295 p~-------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~------~~~~~l~~~~~~~~~~~~~~k 353 (361)
+. .+.++..+|.+|..+|++++|+..|++++++.|... .++..++.+...+++.+++.+
T Consensus 174 ~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~ 245 (383)
T 3ulq_A 174 KEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIP 245 (383)
T ss_dssp HTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHH
Confidence 43 356999999999999999999999999999976443 477788888887777666544
No 176
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.07 E-value=1.1e-09 Score=102.58 Aligned_cols=109 Identities=17% Similarity=0.076 Sum_probs=96.6
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..+...|+|++|+++|++|+++.+.. ...+....++.|+|.+|..+|++++|+.++++
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~ 247 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI------------QNDRFIAISLLNIANSYDRSGDDQMAVEHFQK 247 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc------------CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 357788899999999999999999999999965322 02335667899999999999999999999999
Q ss_pred Hhh-----cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 018098 290 AMR-----DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN 330 (361)
Q Consensus 290 al~-----~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 330 (361)
++. .+|..+.+++.+|.++..+|++++|+..+++++++.+.
T Consensus 248 al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 248 AAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 999 88888999999999999999999999999999999654
No 177
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.07 E-value=4.9e-10 Score=101.36 Aligned_cols=128 Identities=16% Similarity=0.080 Sum_probs=99.3
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+...|..+...|+|++|+.+|++++.+..... .......+++++|.+|..+|+|++|+.++++|+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~------------~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal 182 (293)
T 2qfc_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI------------DVYQNLYIENAIANIYAENGYLKKGIDLFEQIL 182 (293)
T ss_dssp HHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSS------------CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCC------------chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34455677777888888888888888887432110 011245689999999999999999999999999
Q ss_pred ---hcCCCc----hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHHHHHHHH
Q 018098 292 ---RDGDDN----VKALFRQGQAYMALNDVDAAVESFEKALKLEPN------DGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 292 ---~~~p~~----~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~------~~~~~~~l~~~~~~~~~~~~~ 351 (361)
+..|.+ +.+++++|.+|..+|+|++|+.+|++++++.+. -..++..++.+...+++.+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A 255 (293)
T 2qfc_A 183 KQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAE 255 (293)
T ss_dssp HHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 445553 379999999999999999999999999998643 156778888888877766555
No 178
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.07 E-value=1e-09 Score=81.96 Aligned_cols=68 Identities=22% Similarity=0.371 Sum_probs=65.7
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHhhcCCCchh-hHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 018098 268 TNSSACKLKLGDLKGALLDTEFAMRDGDDNVK-ALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIK 335 (361)
Q Consensus 268 ~nla~~~~~l~~~~~Al~~~~~al~~~p~~~k-a~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~ 335 (361)
+++|.++...|+|++|+..++++++++|+++. +++.+|.++..+|++++|+..|+++++++|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 57899999999999999999999999999999 999999999999999999999999999999998877
No 179
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.06 E-value=5.1e-10 Score=105.38 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=106.9
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..++..|+|++|+..|+++++..+. .......++.++|.+|..+|++++|+.++++
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~--------------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 111 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE--------------DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKH 111 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--------------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc--------------ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45778889999999999999999999999983210 1223446899999999999999999999999
Q ss_pred Hhhc------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHH
Q 018098 290 AMRD------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL------EPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 290 al~~------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~~ 347 (361)
++.+ +|....+++.+|.+|..+|++++|+..|++++++ .|....++..++.+...+++
T Consensus 112 al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 112 DLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 9988 6778999999999999999999999999999999 45556688888888888777
No 180
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.06 E-value=2.1e-09 Score=81.84 Aligned_cols=91 Identities=20% Similarity=0.169 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
.+..+.++|.++...|++++|+..+++++..+|.++.+++.+|.++..+|++++|+..++++++++|.+..++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHH
Q 018098 343 KKIHERREQEK 353 (361)
Q Consensus 343 ~~~~~~~~~~k 353 (361)
..+++.+++.+
T Consensus 83 ~~~~~~~~A~~ 93 (118)
T 1elw_A 83 EFLNRFEEAKR 93 (118)
T ss_dssp HHTTCHHHHHH
T ss_pred HHHhhHHHHHH
Confidence 88877766544
No 181
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.06 E-value=2.6e-09 Score=82.84 Aligned_cols=95 Identities=15% Similarity=0.197 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
.++....++..+|.++...+++++|+..+++++..+|.++.+++.+|.++..+|++++|+..++++++++|.+..++..+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 018098 339 AVAKKKIHERREQEK 353 (361)
Q Consensus 339 ~~~~~~~~~~~~~~k 353 (361)
+.+...+++.+++.+
T Consensus 87 ~~~~~~~~~~~~A~~ 101 (131)
T 2vyi_A 87 GLALSSLNKHVEAVA 101 (131)
T ss_dssp HHHHHHTTCHHHHHH
T ss_pred HHHHHHhCCHHHHHH
Confidence 999888877766544
No 182
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.04 E-value=7.6e-10 Score=89.36 Aligned_cols=104 Identities=13% Similarity=0.198 Sum_probs=90.7
Q ss_pred hhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcC---ChHHHHHHHHHHhhcC-C-Cchhh
Q 018098 226 QDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG---DLKGALLDTEFAMRDG-D-DNVKA 300 (361)
Q Consensus 226 g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~---~~~~Al~~~~~al~~~-p-~~~ka 300 (361)
.....+.+.|.+.+. ..+.+..+.+++|.|+.+.+ +.++++..++.+++.+ | ++..+
T Consensus 12 ~~l~~~~~~y~~e~~------------------~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~ 73 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKA------------------AGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDY 73 (152)
T ss_dssp HHHHHHHHHHHHHHH------------------TTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHc------------------cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHH
Confidence 455667778888776 34456788999999999988 7789999999999999 7 67999
Q ss_pred HhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 301 LFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 301 ~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
+|++|.+++.+++|++|+.+++++++++|+|..+......+..++.+
T Consensus 74 lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~~k 120 (152)
T 1pc2_A 74 VFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 120 (152)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888777643
No 183
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.02 E-value=3.4e-09 Score=94.33 Aligned_cols=109 Identities=17% Similarity=0.130 Sum_probs=61.9
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh----cCChHHHHHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK----LGDLKGALLDT 287 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~Al~~~ 287 (361)
+..+..+|..++..+++++|+.+|+++++ +....++.++|.+|.. .+++++|+.++
T Consensus 6 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~--------------------~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~ 65 (273)
T 1ouv_A 6 PKELVGLGAKSYKEKDFTQAKKYFEKACD--------------------LKENSGCFNLGVLYYQGQGVEKNLKKAASFY 65 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH--------------------TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHH--------------------CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHH
Confidence 45666777777777777777777777765 1122345555555555 55555555555
Q ss_pred HHHhhcCCCchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 288 EFAMRDGDDNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 288 ~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
+++++++ ++.+++.+|.+|.. .+++++|+..|+++++++ +..++..++.+...
T Consensus 66 ~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 122 (273)
T 1ouv_A 66 AKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 122 (273)
T ss_dssp HHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHc
Confidence 5555553 45555555555555 555555555555555542 44455555554443
No 184
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.01 E-value=1.3e-09 Score=101.80 Aligned_cols=130 Identities=15% Similarity=0.181 Sum_probs=107.8
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+.+|++++++.+.. ...+....++.++|.+|..+|++++|+.+++++
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 253 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF------------GDKAAERRAYSNLGNAYIFLGEFETASEYYKKT 253 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc------------CCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 35678889999999999999999999999855421 013345668999999999999999999999999
Q ss_pred hhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 291 l~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+.+.|.. ..+++.+|.++..+|++++|+..|++++++.+.. ..++..++.+...+++.+++.
T Consensus 254 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 327 (406)
T 3sf4_A 254 LLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAM 327 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 9887765 7899999999999999999999999999986643 557777788777776665544
No 185
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.01 E-value=2.6e-09 Score=83.43 Aligned_cols=88 Identities=19% Similarity=0.160 Sum_probs=81.1
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCch---hhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNV---KALFRQGQAYMALNDVDAAVESFEKALKLEPND---GGIKKELA 339 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~---ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~---~~~~~~l~ 339 (361)
+++++|.+++..|+|++|+..++++++.+|++. .+++.+|.++..+|++++|+..|+++++++|++ +.++..++
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 468899999999999999999999999999998 899999999999999999999999999999999 88899999
Q ss_pred HHHHHHHHHHHHHH
Q 018098 340 VAKKKIHERREQEK 353 (361)
Q Consensus 340 ~~~~~~~~~~~~~k 353 (361)
.+...+++.+++.+
T Consensus 84 ~~~~~~g~~~~A~~ 97 (129)
T 2xev_A 84 LSQYGEGKNTEAQQ 97 (129)
T ss_dssp HHHHHTTCHHHHHH
T ss_pred HHHHHcCCHHHHHH
Confidence 99888777766553
No 186
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.01 E-value=2.2e-09 Score=85.63 Aligned_cols=95 Identities=17% Similarity=0.087 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCc---hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDN---VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIK 335 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~ 335 (361)
..+.....+..+|.++...|+|++|+..++++++++|++ ..+++++|.++..+|++++|+..|+++++++|.+..++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 345567789999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018098 336 KELAVAKKKIHERREQEK 353 (361)
Q Consensus 336 ~~l~~~~~~~~~~~~~~k 353 (361)
..++.+...+++.+++.+
T Consensus 103 ~~~a~~~~~~~~~~~A~~ 120 (148)
T 2dba_A 103 YRRSQALEKLGRLDQAVL 120 (148)
T ss_dssp HHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHH
Confidence 999999988887766554
No 187
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.00 E-value=1.7e-10 Score=107.01 Aligned_cols=103 Identities=14% Similarity=0.057 Sum_probs=58.8
Q ss_pred HHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 214 ~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
.+.++|..+++.|+|++|+.+|+++++ ++|.+..+|+++|.+|..+|+|++|+.++++++++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l 293 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLT------------------EEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY 293 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 778999999999999999999999999 78888999999999999999999999999999999
Q ss_pred CCCchhhHhHHHHH-HHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 018098 294 GDDNVKALFRQGQA-YMALNDVDAAVESFEKALKLEPNDGGI 334 (361)
Q Consensus 294 ~p~~~ka~~~~a~a-~~~l~~~~~A~~~~~~al~l~P~~~~~ 334 (361)
+|++..++..++.+ ....++.+++...|.+++.+.|+++..
T Consensus 294 ~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~~ 335 (338)
T 2if4_A 294 APDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGAK 335 (338)
T ss_dssp ------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCC
Confidence 99999999999988 445678888999999999999987643
No 188
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.00 E-value=1.2e-09 Score=98.67 Aligned_cols=123 Identities=16% Similarity=0.109 Sum_probs=102.7
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+...|..++..|+|++|+..|+++++..+. .......++.++|.++..+|++++|+..++++
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~--------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 69 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE--------------DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHD 69 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS--------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc--------------cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3557788999999999999999999999983210 12234678999999999999999999999999
Q ss_pred hhc------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHHHH
Q 018098 291 MRD------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG------GIKKELAVAKKKIHE 347 (361)
Q Consensus 291 l~~------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~------~~~~~l~~~~~~~~~ 347 (361)
+.+ .|....+++.+|.++..+|++++|+..+++++++.|... .++..++.+...+++
T Consensus 70 l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 70 LTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 987 556688999999999999999999999999999876542 367777777777766
No 189
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.99 E-value=5.3e-09 Score=95.26 Aligned_cols=106 Identities=13% Similarity=0.101 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-------cCCh-------HHHHHHHHHHhh-c
Q 018098 229 KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-------LGDL-------KGALLDTEFAMR-D 293 (361)
Q Consensus 229 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-------l~~~-------~~Al~~~~~al~-~ 293 (361)
++|+..|++++. .+|.+..+|+++|..+.. +|++ ++|+..+++|++ +
T Consensus 33 ~~a~~~~~~al~------------------~~p~~~~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~ 94 (308)
T 2ond_A 33 KRVMFAYEQCLL------------------VLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL 94 (308)
T ss_dssp HHHHHHHHHHHH------------------HHTTCHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHH------------------HcCCCHHHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHh
Confidence 789999999999 899999999999999874 5886 999999999999 7
Q ss_pred CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHHHHHH
Q 018098 294 GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG-IKKELAVAKKKIHERREQE 352 (361)
Q Consensus 294 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~-~~~~l~~~~~~~~~~~~~~ 352 (361)
+|++..+|+.+|.++..+|++++|+..|+++++++|.+.. ++..++.+..+.++.+++.
T Consensus 95 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~ 154 (308)
T 2ond_A 95 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGR 154 (308)
T ss_dssp TTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999886 8999999887777666543
No 190
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.99 E-value=9.9e-10 Score=103.35 Aligned_cols=130 Identities=16% Similarity=0.193 Sum_probs=106.0
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+.+|++++++.+.. ........++.++|.+|..+|++++|+.+++++
T Consensus 222 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 289 (411)
T 4a1s_A 222 QGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREF------------GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRT 289 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH------------TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc------------CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 34578889999999999999999999999954321 012233458999999999999999999999999
Q ss_pred hhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 291 l~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+.+.+.. ..+++.+|.++..+|++++|+.+|++++++.+.. ..++..++.+...+++.+++.
T Consensus 290 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~ 363 (411)
T 4a1s_A 290 LALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHERAL 363 (411)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHHHH
Confidence 9887754 7899999999999999999999999999986542 346777777777776665544
No 191
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.98 E-value=2.6e-09 Score=99.75 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=108.6
Q ss_pred hhHHHHHhcchhHHhhh--------------------HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQD--------------------YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNS 270 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~--------------------y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl 270 (361)
.+..+..+|..++..|+ |++|+..|.+++.+.... ...+....++.++
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~l 193 (406)
T 3sf4_A 126 EARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTAL------------GDRAAQGRAFGNL 193 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhc------------cCcHHHHHHHHHH
Confidence 36688999999999999 999999999999855322 1245677899999
Q ss_pred HHHHHhcCChHHHHHHHHHHhhcCCCchh------hHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHH
Q 018098 271 SACKLKLGDLKGALLDTEFAMRDGDDNVK------ALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKKEL 338 (361)
Q Consensus 271 a~~~~~l~~~~~Al~~~~~al~~~p~~~k------a~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l 338 (361)
|.+|..+|++++|+..+++++.+.|.... +++.+|.++..+|++++|+..|++++++.|.. ..++..+
T Consensus 194 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 273 (406)
T 3sf4_A 194 GNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSL 273 (406)
T ss_dssp HHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHH
Confidence 99999999999999999999988766544 99999999999999999999999999998765 5567777
Q ss_pred HHHHHHHHHHHHHH
Q 018098 339 AVAKKKIHERREQE 352 (361)
Q Consensus 339 ~~~~~~~~~~~~~~ 352 (361)
+.+....++.+++.
T Consensus 274 a~~~~~~g~~~~A~ 287 (406)
T 3sf4_A 274 GNTYTLLQDYEKAI 287 (406)
T ss_dssp HHHHHHTTCHHHHH
T ss_pred HHHHHHhCcHHHHH
Confidence 77777666655544
No 192
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.98 E-value=2.8e-09 Score=85.64 Aligned_cols=108 Identities=20% Similarity=0.161 Sum_probs=91.3
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+.+|++++++.+.. ...+....++.++|.++..+|++++|+..++++
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 115 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL------------KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKH 115 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh------------CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 35678899999999999999999999999955422 012345678999999999999999999999999
Q ss_pred hhcCC------CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 018098 291 MRDGD------DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN 330 (361)
Q Consensus 291 l~~~p------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 330 (361)
+.+.+ ....+++.+|.++..+|++++|+..+++++++...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 116 LAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 97743 23678999999999999999999999999988654
No 193
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.98 E-value=1.3e-10 Score=112.92 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=91.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..+++.|+|++|+..|++|++ ++|....+++++|.+|..+|++++|+..+++|
T Consensus 39 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~a 100 (477)
T 1wao_1 39 NAIYYGNRSLAYLRTECYGYALGDATRAIE------------------LDKKYIKGYYRRAASNMALGKFRAALRDYETV 100 (477)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------SCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 477889999999999999999999999999 67778889999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHH--HHhcCCHHHHHHHHH-----------HHHHhCCCC
Q 018098 291 MRDGDDNVKALFRQGQA--YMALNDVDAAVESFE-----------KALKLEPND 331 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a--~~~l~~~~~A~~~~~-----------~al~l~P~~ 331 (361)
++++|++..++..++.+ +..+|++++|++.++ ++++++|..
T Consensus 101 l~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 101 VKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp HHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 99999999999999998 889999999999999 888888763
No 194
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.97 E-value=1.5e-09 Score=99.10 Aligned_cols=122 Identities=7% Similarity=-0.073 Sum_probs=110.6
Q ss_pred HhhhHHHHHhcchh----HHh---hhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChH
Q 018098 209 MNAVDSIKVFGNEH----YKK---QDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLK 281 (361)
Q Consensus 209 ~~~a~~~~~~G~~~----~~~---g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~ 281 (361)
++...++..++..+ ... +++++++..+.++++ .+|.+..+|.+++.+..+++.++
T Consensus 100 Pk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~------------------~~pkny~aW~~R~~vl~~l~~~~ 161 (306)
T 3dra_A 100 EKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLS------------------SDPKNHHVWSYRKWLVDTFDLHN 161 (306)
T ss_dssp TTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCTT
T ss_pred cccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHhcccC
Confidence 34566777778777 555 789999999999999 89999999999999999999999
Q ss_pred --HHHHHHHHHhhcCCCchhhHhHHHHHHHhcCC------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 018098 282 --GALLDTEFAMRDGDDNVKALFRQGQAYMALND------VDAAVESFEKALKLEPNDGGIKKELAVAKKKIHER 348 (361)
Q Consensus 282 --~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~------~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 348 (361)
++++.++++|+.+|.|..||..|+.++..+++ ++++++++++++.++|+|..++..+.-+....+..
T Consensus 162 ~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~~ 236 (306)
T 3dra_A 162 DAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRS 236 (306)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998 99999999999999999999999999887776543
No 195
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.97 E-value=1.2e-09 Score=104.79 Aligned_cols=124 Identities=15% Similarity=0.074 Sum_probs=98.0
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc--CChHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL--GDLKGALLDTE 288 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l--~~~~~Al~~~~ 288 (361)
.+..+.++|..++..|+|++|+.+|++++.+.+..... ..+....++.++|.++.++ ++|++|+.+|+
T Consensus 93 ~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~----------~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~ 162 (472)
T 4g1t_A 93 SLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSP----------YRIESPELDCEEGWTRLKCGGNQNERAKVCFE 162 (472)
T ss_dssp THHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCS----------SCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccc----------cchhhHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 35667889999999999999999999999865533111 1112345677888777765 46999999999
Q ss_pred HHhhcCCCchhhHhHHHHHHHh---cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 289 FAMRDGDDNVKALFRQGQAYMA---LNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 289 ~al~~~p~~~ka~~~~a~a~~~---l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
+|++++|+++.+++.+|.++.. .+++++|+..|+++++++|++..++..++.....
T Consensus 163 kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~ 221 (472)
T 4g1t_A 163 KALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHK 221 (472)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHH
Confidence 9999999999999999988654 4677889999999999999998888777755443
No 196
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.97 E-value=5.7e-09 Score=80.09 Aligned_cols=91 Identities=27% Similarity=0.341 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
...++.++|.++...|++++|+..+++++..+|.+..+++.+|.++...|++++|+..|+++++++|.+..++..++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHH
Q 018098 343 KKIHERREQEK 353 (361)
Q Consensus 343 ~~~~~~~~~~k 353 (361)
...++.+++.+
T Consensus 88 ~~~~~~~~A~~ 98 (125)
T 1na0_A 88 YKQGDYDEAIE 98 (125)
T ss_dssp HHTTCHHHHHH
T ss_pred HHhcCHHHHHH
Confidence 87776655443
No 197
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.97 E-value=2.3e-08 Score=90.20 Aligned_cols=132 Identities=14% Similarity=0.020 Sum_probs=105.8
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
.....+...+..++..|+|++|++.|.+++...+. ..........+.++|.++...|++++|+.++++
T Consensus 73 ~~~~~l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 140 (293)
T 2qfc_A 73 ERKKQFKDQVIMLCKQKRYKEIYNKVWNELKKEEY------------HPEFQQFLQWQYYVAAYVLKKVDYEYCILELKK 140 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCC------------CHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhHHHHHHHHHHHhccccC------------ChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 34567788899999999999999999999984321 112334556678899999999999999999999
Q ss_pred HhhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHH---HhCCCCH----HHHHHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKAL---KLEPNDG----GIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 290 al~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al---~l~P~~~----~~~~~l~~~~~~~~~~~~~~k 353 (361)
|+.+.+.. ..+++.+|.+|..+|++++|+.+|++++ +..|++. .++..++.+...+++.+++..
T Consensus 141 al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~ 217 (293)
T 2qfc_A 141 LLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLY 217 (293)
T ss_dssp HHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHH
Confidence 99876544 5689999999999999999999999999 5566654 577788888777777666543
No 198
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.97 E-value=1.8e-09 Score=97.28 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
....+.++|.++...|+|++|+..+++++.++|+++.+++++|.+|..+|++++|+.+|+++++++|++..++..++.+.
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 018098 343 KKIHERREQEKK 354 (361)
Q Consensus 343 ~~~~~~~~~~k~ 354 (361)
..+++.+++.+.
T Consensus 83 ~~~g~~~~A~~~ 94 (281)
T 2c2l_A 83 LEMESYDEAIAN 94 (281)
T ss_dssp HHTTCHHHHHHH
T ss_pred HHcCCHHHHHHH
Confidence 888877766543
No 199
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.97 E-value=1.9e-09 Score=97.32 Aligned_cols=131 Identities=15% Similarity=0.182 Sum_probs=107.9
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|++++|+..|++++++.+.. ...+....++.++|.++..+|++++|+..++++
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~------------~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 249 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF------------GDKAAERRAYSNLGNAYIFLGEFETASEYYKKT 249 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH------------TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc------------CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 35678889999999999999999999999854321 013344568999999999999999999999999
Q ss_pred hhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 291 l~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~~k 353 (361)
+.+.+.. ..+++.+|.++..+|++++|+..+++++++.|.. ..++..++.+...+++.+++.+
T Consensus 250 l~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 324 (338)
T 3ro2_A 250 LLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMH 324 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHH
Confidence 9887665 7899999999999999999999999999987643 3467778888777777665544
No 200
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.96 E-value=3.1e-09 Score=82.45 Aligned_cols=91 Identities=15% Similarity=0.105 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-------HHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND-------GGIK 335 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~-------~~~~ 335 (361)
...++.++|.++...|++++|+..+++++.++|.++.+++.+|.++..+|++++|+..|++++++.|.+ ..++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999999877 8888
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 018098 336 KELAVAKKKIHERREQEK 353 (361)
Q Consensus 336 ~~l~~~~~~~~~~~~~~k 353 (361)
..++.+...+++.+++.+
T Consensus 83 ~~la~~~~~~~~~~~A~~ 100 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIH 100 (131)
T ss_dssp HHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhccHHHHHH
Confidence 888888888777665543
No 201
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.95 E-value=7.1e-09 Score=92.19 Aligned_cols=110 Identities=23% Similarity=0.109 Sum_probs=78.2
Q ss_pred hhHHHHHhcchhHH----hhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh----cCChHH
Q 018098 211 AVDSIKVFGNEHYK----KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK----LGDLKG 282 (361)
Q Consensus 211 ~a~~~~~~G~~~~~----~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~ 282 (361)
.+..+..+|..+.. .+++++|+.+|+++++ .. ...+++++|.+|.. .+++++
T Consensus 37 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~------------------~~--~~~a~~~lg~~~~~g~~~~~~~~~ 96 (273)
T 1ouv_A 37 ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACD------------------LN--YSNGCHLLGNLYYSGQGVSQNTNK 96 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH------------------TT--CHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHH------------------CC--CHHHHHHHHHHHhCCCCcccCHHH
Confidence 35667888888888 8999999999999887 21 34566777777777 777777
Q ss_pred HHHHHHHHhhcCCCchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 283 ALLDTEFAMRDGDDNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 283 Al~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
|+.+++++++.+ ++.+++.+|.+|.. .+++++|+.+|+++++++ +..+...++.+...
T Consensus 97 A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 97 ALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 777777777664 66777777777777 777777777777777665 45555556555544
No 202
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.95 E-value=7.2e-09 Score=99.13 Aligned_cols=127 Identities=12% Similarity=0.081 Sum_probs=100.2
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL 284 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al 284 (361)
.......+....+.+......|+|++|+..|+++|++....... .+|.....+.|+|.+|..+|+|++|+
T Consensus 291 v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~----------~Hp~~a~~~~nLa~~y~~~g~~~eA~ 360 (433)
T 3qww_A 291 IRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFED----------SNVYMLHMMYQAMGVCLYMQDWEGAL 360 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCT----------TSHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccCh----------hchHHHHHHHHHHHHHHhhcCHHHHH
Confidence 33334444455555555556789999999999999966543211 46778899999999999999999999
Q ss_pred HHHHHHhhc--------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Q 018098 285 LDTEFAMRD--------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL-----EPNDGGIKKELAVA 341 (361)
Q Consensus 285 ~~~~~al~~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-----~P~~~~~~~~l~~~ 341 (361)
.+++++|++ +|+-...++++|.+|..+|+|++|+..|++|+++ -|+++.+......+
T Consensus 361 ~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l 430 (433)
T 3qww_A 361 KYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEI 430 (433)
T ss_dssp HHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 999999954 4455789999999999999999999999999986 57788777655544
No 203
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.94 E-value=3.8e-09 Score=90.97 Aligned_cols=134 Identities=16% Similarity=0.055 Sum_probs=99.6
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhc--------cccccCCC--Cccc-----hhHHHHHHHHHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLD--------ICWEKEGI--DEGK-----SSSLRKTKSQIFTNSSACK 274 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~--------~~~~~~~~--~~~~-----~~~~~~~~~~~~~nla~~~ 274 (361)
..+.++..+|..++..+++++|+.+|+++++.-. .+...... +.+. ....++....+++++|.+|
T Consensus 16 g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y 95 (212)
T 3rjv_A 16 GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQQADYPQARQLAEKAVEAGSKSGEIVLARVL 95 (212)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHTTSSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3467778888888888888888888888776311 00111100 1110 0123456677899999999
Q ss_pred Hh----cCChHHHHHHHHHHhhcCC--CchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 275 LK----LGDLKGALLDTEFAMRDGD--DNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 275 ~~----l~~~~~Al~~~~~al~~~p--~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
.. .+++++|+.+++++++.+| .++.+++++|.+|.. .+++++|+.+|++++++ |.++.+...++.+...
T Consensus 96 ~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~ 174 (212)
T 3rjv_A 96 VNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRTGYAEYWAGMMFQQ 174 (212)
T ss_dssp TCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCTTHHHHHHHHHHHH
T ss_pred HcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHc
Confidence 88 8899999999999999998 458999999999998 88999999999999998 6677788888887654
No 204
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.94 E-value=5.8e-09 Score=93.51 Aligned_cols=109 Identities=11% Similarity=-0.027 Sum_probs=92.6
Q ss_pred HHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHH-HHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT-KSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 214 ~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
.++.+|..+++.++|++|+.+|++++... ++. ...+++++|.++..+|++++|+.++++++.
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~~-----------------d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~ 199 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKWP-----------------DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND 199 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGCS-----------------CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhccC-----------------CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 67888999999999999999998777611 222 345889999999999999999999999986
Q ss_pred cC--CC-chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 018098 293 DG--DD-NVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAV 340 (361)
Q Consensus 293 ~~--p~-~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~ 340 (361)
.. |. .+.+++++|.++..+|+.++|...|++++..+|+ ..+...|..
T Consensus 200 g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~aL~~ 249 (282)
T 4f3v_A 200 SPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAALKD 249 (282)
T ss_dssp STTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHHHHC
T ss_pred CCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHHHhC
Confidence 54 65 6789999999999999999999999999999998 877776643
No 205
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.93 E-value=2.1e-08 Score=92.18 Aligned_cols=117 Identities=6% Similarity=-0.093 Sum_probs=106.2
Q ss_pred hhHHHHHhcchhHHhhh----------HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCC-
Q 018098 211 AVDSIKVFGNEHYKKQD----------YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD- 279 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~----------y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~- 279 (361)
...++..++..+...+. +++++..+.+++. .+|.+..+|++++.+...+++
T Consensus 63 ~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~------------------~~PKny~aW~hR~wlL~~l~~~ 124 (331)
T 3dss_A 63 FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR------------------VNPKSYGTWHHRCWLLSRLPEP 124 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHCSSC
T ss_pred hHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHhccCcc
Confidence 35667777777766555 7899999999998 899999999999999999994
Q ss_pred -hHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 018098 280 -LKGALLDTEFAMRDGDDNVKALFRQGQAYMALND-VDAAVESFEKALKLEPNDGGIKKELAVAKKKI 345 (361)
Q Consensus 280 -~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~-~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~ 345 (361)
+++++..|+++|+++|.|..||+.++.+...++. +++++++++++++.+|.|..++..+..+...+
T Consensus 125 ~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 125 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999 69999999999999999999999999988777
No 206
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.93 E-value=5.7e-09 Score=103.44 Aligned_cols=120 Identities=9% Similarity=-0.001 Sum_probs=104.0
Q ss_pred hHHhhhH-HHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCC----------hHHHHHHHHHH
Q 018098 222 HYKKQDY-KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD----------LKGALLDTEFA 290 (361)
Q Consensus 222 ~~~~g~y-~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~----------~~~Al~~~~~a 290 (361)
..+.++| ++|++.|.+++. .+|....+|++++.+...+++ +++++..++++
T Consensus 38 ~~~~~~~~eeal~~~~~~l~------------------~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~ 99 (567)
T 1dce_A 38 KRQAGELDESVLELTSQILG------------------ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESC 99 (567)
T ss_dssp HHHTTCCSHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHH------------------HCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHH
Confidence 3445555 568999999999 899999999999999999998 99999999999
Q ss_pred hhcCCCchhhHhHHHHHHHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018098 291 MRDGDDNVKALFRQGQAYMALN--DVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKKQYRKM 359 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~l~--~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 359 (361)
|+.+|++..+|+.|+.++..++ ++++|+++++++++++|.|-.+|...+-+...++...+++-+.+.++
T Consensus 100 l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~ 170 (567)
T 1dce_A 100 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSL 170 (567)
T ss_dssp HHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTT
T ss_pred HHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 9999999999999999999999 77999999999999999999999999998887762223344444443
No 207
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.92 E-value=9.3e-10 Score=89.75 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=66.6
Q ss_pred HHHhhhHHHHHhcchhHHhhhH----------HHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh
Q 018098 207 WWMNAVDSIKVFGNEHYKKQDY----------KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK 276 (361)
Q Consensus 207 ~~~~~a~~~~~~G~~~~~~g~y----------~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~ 276 (361)
.....++.+.+.|..+...+++ ++|+..|++||+ ++|....+|+|+|.+|..
T Consensus 31 l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~------------------ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 31 SNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALL------------------IDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHH------------------hCcCcHHHHHHHHHHHHH
Confidence 3344688899999999998876 599999999999 999999999999999999
Q ss_pred cC-----------ChHHHHHHHHHHhhcCCCch
Q 018098 277 LG-----------DLKGALLDTEFAMRDGDDNV 298 (361)
Q Consensus 277 l~-----------~~~~Al~~~~~al~~~p~~~ 298 (361)
+| ++++|+.+|++||+++|++.
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 85 89999999999999999874
No 208
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.90 E-value=6.5e-09 Score=94.80 Aligned_cols=118 Identities=7% Similarity=-0.160 Sum_probs=108.9
Q ss_pred hhHHHHHhcchhHHhh--hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHH----Hhc---CChH
Q 018098 211 AVDSIKVFGNEHYKKQ--DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACK----LKL---GDLK 281 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g--~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~----~~l---~~~~ 281 (361)
...++..+|..+...+ ++++|+..+.+++. .+|.+..+|+.++.+. ..+ ++++
T Consensus 66 ~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~------------------~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~ 127 (306)
T 3dra_A 66 HYTIWIYRFNILKNLPNRNLYDELDWCEEIAL------------------DNEKNYQIWNYRQLIIGQIMELNNNDFDPY 127 (306)
T ss_dssp CHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH------------------HCTTCCHHHHHHHHHHHHHHHHTTTCCCTH
T ss_pred HHHHHHHHHHHHHHcccccHHHHHHHHHHHHH------------------HCcccHHHHHHHHHHHHHHHHhccccCCHH
Confidence 4677888898988888 99999999999998 8899999999999999 777 8999
Q ss_pred HHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHH--HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 018098 282 GALLDTEFAMRDGDDNVKALFRQGQAYMALNDVD--AAVESFEKALKLEPNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 282 ~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~--~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 346 (361)
+++..|+++|+.+|.|..+|+.|+.++..++.++ ++++.++++++.+|.|-.++.....+...+.
T Consensus 128 ~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~ 194 (306)
T 3dra_A 128 REFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKK 194 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSG
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999 9999999999999999999998888866654
No 209
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.89 E-value=3.5e-09 Score=91.20 Aligned_cols=109 Identities=14% Similarity=0.104 Sum_probs=86.1
Q ss_pred chhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcC----ChHHHHHHHHHHhhcCC
Q 018098 220 NEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG----DLKGALLDTEFAMRDGD 295 (361)
Q Consensus 220 ~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~----~~~~Al~~~~~al~~~p 295 (361)
..++..|..-.-...|.+|+.+.... .+..+..+++++|.+|.. + ++++|+.+++++++ +
T Consensus 19 ~a~~~lg~~~~~~~~~~~A~~~~~~a-------------~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~ 82 (212)
T 3rjv_A 19 RAQYYLADTWVSSGDYQKAEYWAQKA-------------AAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--A 82 (212)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHH-------------HHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHH-------------HHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--C
Confidence 34445555544455677888766554 455667889999999988 7 89999999999965 4
Q ss_pred CchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHH
Q 018098 296 DNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPN--DGGIKKELAVAKKK 344 (361)
Q Consensus 296 ~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~--~~~~~~~l~~~~~~ 344 (361)
.++.+++++|.+|.. .+++++|+.+|+++++..|. ++.+...|+.+...
T Consensus 83 g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 83 GSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp TCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 688999999999988 88999999999999999873 47888888888766
No 210
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.87 E-value=2.2e-08 Score=92.53 Aligned_cols=111 Identities=11% Similarity=0.002 Sum_probs=101.1
Q ss_pred hhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHhhcCCCchh
Q 018098 221 EHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-DLKGALLDTEFAMRDGDDNVK 299 (361)
Q Consensus 221 ~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~-~~~~Al~~~~~al~~~p~~~k 299 (361)
...+.+..++|+..+.++|. ++|.+..+|+.++.+...++ .+++++..++++|..+|++..
T Consensus 63 ~~~~~e~se~AL~lt~~~L~------------------~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~ 124 (349)
T 3q7a_A 63 IAAKEEKSERALELTEIIVR------------------MNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQ 124 (349)
T ss_dssp HHHTTCCSHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHH
T ss_pred HHHhCCCCHHHHHHHHHHHH------------------hCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHH
Confidence 33344556789999999999 89999999999999999999 599999999999999999999
Q ss_pred hHhHHHHHHHhc-C-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 018098 300 ALFRQGQAYMAL-N-DVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 300 a~~~~a~a~~~l-~-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 349 (361)
+|+.|+.++..+ + +++++++.++++++++|.|-.++....-+...+....
T Consensus 125 aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~ 176 (349)
T 3q7a_A 125 VWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLG 176 (349)
T ss_dssp HHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccc
Confidence 999999999998 8 9999999999999999999999999998888777655
No 211
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.87 E-value=2.3e-08 Score=95.57 Aligned_cols=121 Identities=11% Similarity=0.063 Sum_probs=96.1
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+......-..+.++|+|++|+..|++++++...... ..+|.....+.|+|.+|..+|+|++|+.+++++|
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg----------~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L 356 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLP----------DINIYQLKVLDCAMDACINLGLLEEALFYGTRTM 356 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCC----------TTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCC----------ccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Confidence 334444455677889999999999999985433211 2467788999999999999999999999999999
Q ss_pred hc--------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh-----CCCCHHHHHHHHHHH
Q 018098 292 RD--------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL-----EPNDGGIKKELAVAK 342 (361)
Q Consensus 292 ~~--------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-----~P~~~~~~~~l~~~~ 342 (361)
.+ +|.-...++++|.+|..+|++++|+..|++|+++ -|+++.+...+..+.
T Consensus 357 ~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~ 420 (429)
T 3qwp_A 357 EPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLE 420 (429)
T ss_dssp HHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHH
T ss_pred HhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 44 3445789999999999999999999999999986 577776665544443
No 212
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.86 E-value=2.8e-09 Score=82.45 Aligned_cols=76 Identities=8% Similarity=0.030 Sum_probs=70.0
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~ 288 (361)
...+..+..+|..++..|+|++|+..|+++++ ..|.+..++.++|.|+..+|++++|+..++
T Consensus 24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~------------------~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 85 (117)
T 3k9i_A 24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVK------------------QFPNHQALRVFYAMVLYNLGRYEQGVELLL 85 (117)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34578899999999999999999999999999 788889999999999999999999999999
Q ss_pred HHhhcCCCchhhHh
Q 018098 289 FAMRDGDDNVKALF 302 (361)
Q Consensus 289 ~al~~~p~~~ka~~ 302 (361)
+++...|+++....
T Consensus 86 ~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 86 KIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHCCCHHHHH
T ss_pred HHHHhCCCcHHHHH
Confidence 99999999876643
No 213
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.84 E-value=1.5e-08 Score=85.37 Aligned_cols=109 Identities=16% Similarity=0.092 Sum_probs=90.5
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+..+|..+...|+|++|+.+|.+++++...... .......++.++|.++..+|++++|+.++++
T Consensus 64 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~-----------~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 132 (203)
T 3gw4_A 64 AEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPE-----------DPLAASANAYEVATVALHFGDLAGARQEYEK 132 (203)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-----------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCc-----------cHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 35778899999999999999999999999996532100 1125567899999999999999999999999
Q ss_pred HhhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 018098 290 AMRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEP 329 (361)
Q Consensus 290 al~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 329 (361)
++.+.+.. ..++..+|.++..+|++++|+..+++++++..
T Consensus 133 al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 133 SLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 99764321 45678999999999999999999999999864
No 214
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.83 E-value=1.3e-08 Score=84.59 Aligned_cols=119 Identities=8% Similarity=-0.054 Sum_probs=94.6
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhc--c-------c--cccCCCCcc-----chhHHHHHHHHHHHHHH
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLD--I-------C--WEKEGIDEG-----KSSSLRKTKSQIFTNSS 271 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~--~-------~--~~~~~~~~~-----~~~~~~~~~~~~~~nla 271 (361)
....+..+..+|..+...|++++|+..|++++...+ . + ........+ .....+|.+..+++++|
T Consensus 36 ~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la 115 (176)
T 2r5s_A 36 LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELA 115 (176)
T ss_dssp HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHH
Confidence 344578899999999999999999999999876432 0 0 000000000 01234677789999999
Q ss_pred HHHHhcCChHHHHHHHHHHhhcCCCc--hhhHhHHHHHHHhcCCHHHHHHHHHHHHH
Q 018098 272 ACKLKLGDLKGALLDTEFAMRDGDDN--VKALFRQGQAYMALNDVDAAVESFEKALK 326 (361)
Q Consensus 272 ~~~~~l~~~~~Al~~~~~al~~~p~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 326 (361)
.++..+|++++|+..++++++++|+. ..+++.+|.++..+|+.++|+..|++++.
T Consensus 116 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 116 VQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999999999999986 56999999999999999999999999875
No 215
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.82 E-value=1.6e-08 Score=94.92 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhh----------------cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHH
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMR----------------DGDDNVKALFRQGQAYMALNDVDAAVESFEKAL 325 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~----------------~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 325 (361)
.....+.++|.++++.++|++|+..|++||+ ++|.+..+|+++|.+|..+|+|++|+.+|++++
T Consensus 221 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al 300 (370)
T 1ihg_A 221 LISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEAL 300 (370)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 4556789999999999999999999999998 888899999999999999999999999999999
Q ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 326 KLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 326 ~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
+++|++..++..++.+...+++.+++.+.
T Consensus 301 ~~~p~~~~a~~~lg~~~~~~g~~~eA~~~ 329 (370)
T 1ihg_A 301 EIDPSNTKALYRRAQGWQGLKEYDQALAD 329 (370)
T ss_dssp TTCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhCchhHHHHHHHHHHHHHccCHHHHHHH
Confidence 99999999999999999988887766543
No 216
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.80 E-value=3.6e-08 Score=90.61 Aligned_cols=115 Identities=10% Similarity=-0.037 Sum_probs=103.4
Q ss_pred HhhhHHHHHhcchhHHhh--hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCC-hHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQ--DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGD-LKGALL 285 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g--~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~-~~~Al~ 285 (361)
++...++..++..+...+ .|++++..+.++++ .+|.+..+|.+++.+...++. ++++++
T Consensus 105 PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~------------------~dprNy~AW~~R~~vl~~l~~~~~eel~ 166 (331)
T 3dss_A 105 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLE------------------ADERNFHCWDYRRFVAAQAAVAPAEELA 166 (331)
T ss_dssp TTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHhCcCHHHHHH
Confidence 345677788888888877 49999999999999 999999999999999999999 699999
Q ss_pred HHHHHhhcCCCchhhHhHHHHHHHhc--------------CCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 286 DTEFAMRDGDDNVKALFRQGQAYMAL--------------NDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 286 ~~~~al~~~p~~~ka~~~~a~a~~~l--------------~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
+++++|+.+|.|..||..++.++..+ +.++++++++.+++.++|+|..++..+.-+
T Consensus 167 ~~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~Y~r~l 236 (331)
T 3dss_A 167 FTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 236 (331)
T ss_dssp HHHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 99999999999999999999999888 569999999999999999999999755443
No 217
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.78 E-value=5.5e-08 Score=73.81 Aligned_cols=83 Identities=20% Similarity=0.104 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhhcC-------CCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 018098 265 QIFTNSSACKLKLGDLKGALLDTEFAMRDG-------DDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKE 337 (361)
Q Consensus 265 ~~~~nla~~~~~l~~~~~Al~~~~~al~~~-------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~ 337 (361)
.-++.+|..++..++|..|+.++++|++.. +..+.++..+|.++..+|+++.|+..++++++++|+++.+..+
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n 85 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGN 85 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhh
Confidence 346789999999999999999999999753 4568899999999999999999999999999999999999888
Q ss_pred HHHHHHHHHH
Q 018098 338 LAVAKKKIHE 347 (361)
Q Consensus 338 l~~~~~~~~~ 347 (361)
+..++..+..
T Consensus 86 ~~~~~~~~~~ 95 (104)
T 2v5f_A 86 LKYFEYIMAK 95 (104)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8866665543
No 218
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.78 E-value=2.7e-08 Score=75.56 Aligned_cols=83 Identities=23% Similarity=0.156 Sum_probs=69.9
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..+++.++|..|+..|++|++....- . . .......++.++|.|+.++|+++.|+..+++++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~----~-~------~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al 73 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEG----E-I------STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLL 73 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT----C-C------CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhcc----C-C------CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 5678899999999999999999999999843210 0 0 012456789999999999999999999999999
Q ss_pred hcCCCchhhHhHHH
Q 018098 292 RDGDDNVKALFRQG 305 (361)
Q Consensus 292 ~~~p~~~ka~~~~a 305 (361)
+++|++..++.+++
T Consensus 74 ~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 74 ELDPEHQRANGNLK 87 (104)
T ss_dssp HHCTTCHHHHHHHH
T ss_pred hcCCCCHHHHhhHH
Confidence 99999999988876
No 219
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.78 E-value=1.7e-08 Score=93.30 Aligned_cols=118 Identities=6% Similarity=-0.078 Sum_probs=109.2
Q ss_pred hhHHHHHhcchhHHhh-hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc-C-ChHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQ-DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL-G-DLKGALLDT 287 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g-~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l-~-~~~~Al~~~ 287 (361)
...++..++..+...+ .+++++..+.++|. .+|.+..+|+.++.+...+ + ++++++..|
T Consensus 87 ~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~------------------~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~ 148 (349)
T 3q7a_A 87 HYTVWQYRFSLLTSLNKSLEDELRLMNEFAV------------------QNLKSYQVWHHRLLLLDRISPQDPVSEIEYI 148 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH------------------TTCCCHHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHhcCCChHHHHHHH
Confidence 4677888899998888 59999999999998 8889999999999999998 8 999999999
Q ss_pred HHHhhcCCCchhhHhHHHHHHHhcCCHH--------HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 018098 288 EFAMRDGDDNVKALFRQGQAYMALNDVD--------AAVESFEKALKLEPNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 288 ~~al~~~p~~~ka~~~~a~a~~~l~~~~--------~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 346 (361)
+++|+++|.|..||+.|+.++..++.++ +++++++++++.+|.|-.++.....+...+.
T Consensus 149 ~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~ 215 (349)
T 3q7a_A 149 HGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAWGWRWYLRVSRP 215 (349)
T ss_dssp HHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTTST
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999888 9999999999999999999999988866654
No 220
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.77 E-value=2.7e-08 Score=74.01 Aligned_cols=73 Identities=12% Similarity=0.001 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHhcCC---hHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 018098 261 KTKSQIFTNSSACKLKLGD---LKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG 333 (361)
Q Consensus 261 ~~~~~~~~nla~~~~~l~~---~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~ 333 (361)
|.++.++..+|.+++..++ .++|...+++||+++|+++++++.+|.+++..|+|++|+..++++++.+|.++.
T Consensus 3 p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 3 AVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 3456788889999876665 799999999999999999999999999999999999999999999999998544
No 221
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.77 E-value=2.3e-08 Score=89.62 Aligned_cols=123 Identities=13% Similarity=-0.019 Sum_probs=103.2
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
.......+..+...|+|++|.+.|..++. ..|... +.+.+|.++++.++|++|+..++.++
T Consensus 102 ~dl~LayA~~L~~~g~y~eA~~~l~~~~~------------------~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~ 162 (282)
T 4f3v_A 102 LAITMGFAACEAAQGNYADAMEALEAAPV------------------AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAG 162 (282)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHTSSCC------------------TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGG
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHh------------------cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 34566678889999999999999999887 566677 88999999999999999999999998
Q ss_pred hcCCCc--hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC--CC-CHHHHHHHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDN--VKALFRQGQAYMALNDVDAAVESFEKALKLE--PN-DGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 292 ~~~p~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~--P~-~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
...+.. ..+++.+|.++..+|++++|+..|++++.-. |. ..+++..++.+..++.+.+++..
T Consensus 163 ~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~ 229 (282)
T 4f3v_A 163 KWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVA 229 (282)
T ss_dssp GCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred ccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHH
Confidence 864222 4689999999999999999999999998654 55 56788899999888887766543
No 222
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.76 E-value=4.7e-09 Score=79.00 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=64.4
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|+++++ ++|....+|.++|.+|..+|++++|+..++++
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~------------------~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVE------------------TDPDYVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH------------------hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 467899999999999999999999999999 88888899999999999999999999999999
Q ss_pred hhcCCCc
Q 018098 291 MRDGDDN 297 (361)
Q Consensus 291 l~~~p~~ 297 (361)
+++.|.+
T Consensus 68 l~l~~~~ 74 (100)
T 3ma5_A 68 IEVAREE 74 (100)
T ss_dssp HHHHHHH
T ss_pred HhhhhcC
Confidence 9997754
No 223
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.70 E-value=3.3e-08 Score=96.92 Aligned_cols=120 Identities=12% Similarity=0.088 Sum_probs=87.5
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHH-HHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTK-SQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
.+..+...|..+.+.|++++|...|++++++ .|.+ ..+|.+++.++.++|++++|+..+++
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~------------------~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 381 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAI------------------EDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 381 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS------------------SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCc------------------cccCchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3566778888888999999999999999982 2322 24677777777777777777777777
Q ss_pred HhhcCCCchhhHhHHHHH-HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQA-YMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHER 348 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a-~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 348 (361)
|++..|.....+...+.. +..+|++++|...|+++++.+|+++.++..++.+....++.
T Consensus 382 Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~ 441 (530)
T 2ooe_A 382 AREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNED 441 (530)
T ss_dssp HHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCH
T ss_pred HHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCH
Confidence 777777766666655544 33577777777777777777777777777777665554443
No 224
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.69 E-value=2.9e-08 Score=89.55 Aligned_cols=117 Identities=9% Similarity=-0.068 Sum_probs=93.2
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc-----------cccCCCCcc-----chhHHHHHHHHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC-----------WEKEGIDEG-----KSSSLRKTKSQIFTNSSAC 273 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~-----------~~~~~~~~~-----~~~~~~~~~~~~~~nla~~ 273 (361)
..+..+..+|..+...|++++|+..|++++..-+.. ........+ .....+|.+..+++++|.+
T Consensus 149 ~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~ 228 (287)
T 3qou_A 149 QNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQ 228 (287)
T ss_dssp SCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHH
Confidence 356778888999999999999998888876532210 000001100 0123578888999999999
Q ss_pred HHhcCChHHHHHHHHHHhhcCCCc--hhhHhHHHHHHHhcCCHHHHHHHHHHHHH
Q 018098 274 KLKLGDLKGALLDTEFAMRDGDDN--VKALFRQGQAYMALNDVDAAVESFEKALK 326 (361)
Q Consensus 274 ~~~l~~~~~Al~~~~~al~~~p~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 326 (361)
+...|++++|+..+.++++.+|++ ..++.+++.++..+|+.++|+..|++++.
T Consensus 229 l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 229 LHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 999999999999999999999998 89999999999999999999999999875
No 225
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.68 E-value=1.3e-07 Score=87.94 Aligned_cols=129 Identities=12% Similarity=-0.024 Sum_probs=98.3
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+..+|..++..|+|++|+..|++++.+.+.. ........++.++|.++..+|++++|+..++++
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~------------~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~a 119 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH------------DVWHYALWSLIQQSEILFAQGFLQTAWETQEKA 119 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT------------TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc------------CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 35567888999999999999999999999854321 011233556789999999999999999999999
Q ss_pred hhcC--------CCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC-----HHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDG--------DDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPND-----GGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 291 l~~~--------p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~-----~~~~~~l~~~~~~~~~~~~~ 351 (361)
+.+. |....++..+|.++..+|++++|...+++++.+.|.. ...+..++.+....++..++
T Consensus 120 l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 193 (373)
T 1hz4_A 120 FQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNA 193 (373)
T ss_dssp HHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHH
Confidence 9764 3456778889999999999999999999999988752 23455666666655555443
No 226
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.63 E-value=3.3e-07 Score=71.27 Aligned_cols=105 Identities=12% Similarity=0.148 Sum_probs=88.8
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHH---HHHHHHHHhhcC-C-Cchh
Q 018098 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKG---ALLDTEFAMRDG-D-DNVK 299 (361)
Q Consensus 225 ~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~---Al~~~~~al~~~-p-~~~k 299 (361)
......+...|.+++. ..+....+.+++|.|+.+-.+... +|..++..++.+ | ..-.
T Consensus 14 ~~~l~~~~~~y~~e~~------------------~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd 75 (126)
T 1nzn_A 14 VEDLLKFEKKFQSEKA------------------AGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRD 75 (126)
T ss_dssp HHHHHHHHHHHHHHHH------------------HSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhc------------------cCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHH
Confidence 4455667777877765 344556788999999999887666 999999999988 5 5789
Q ss_pred hHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 300 ALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 300 a~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
++|.+|.+++.+|+|++|+.+++.+++++|+|..+..+...+..++.+
T Consensus 76 ~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~~i~k 123 (126)
T 1nzn_A 76 YVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK 123 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998888877653
No 227
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.63 E-value=1.8e-07 Score=74.82 Aligned_cols=98 Identities=17% Similarity=0.069 Sum_probs=83.4
Q ss_pred hcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh----cCChHHHHHHHHHHhhc
Q 018098 218 FGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK----LGDLKGALLDTEFAMRD 293 (361)
Q Consensus 218 ~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~Al~~~~~al~~ 293 (361)
+|..+...+.+++|+.+|++|.+ . .+..+++++|.+|.. .+++++|+.++++|.+.
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~------------------~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACE------------------L--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHH------------------T--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCHHHHHHHHHHHHc------------------C--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC
Confidence 78888888888999999999987 2 456789999999998 89999999999999987
Q ss_pred CCCchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 018098 294 GDDNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPNDGGIKKELA 339 (361)
Q Consensus 294 ~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~ 339 (361)
.++.+++++|.+|.. .+++++|+.+|++|.++. ++.+...++
T Consensus 91 --g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 91 --NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp --TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHC-
T ss_pred --CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC--CHHHHHHHh
Confidence 579999999999999 899999999999999884 555554443
No 228
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.63 E-value=4.8e-07 Score=88.58 Aligned_cols=106 Identities=13% Similarity=0.091 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-------cCChH-------HHHHHHHHHhh-c
Q 018098 229 KMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-------LGDLK-------GALLDTEFAMR-D 293 (361)
Q Consensus 229 ~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-------l~~~~-------~Al~~~~~al~-~ 293 (361)
..|+..|++|+. ..|....+|.++|..+.. +|+++ +|+..+++|++ +
T Consensus 255 ~~a~~~y~~al~------------------~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~ 316 (530)
T 2ooe_A 255 KRVMFAYEQCLL------------------VLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTL 316 (530)
T ss_dssp HHHHHHHHHHHH------------------HHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHH------------------hCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHh
Confidence 578899999999 888899999999999986 79987 99999999997 8
Q ss_pred CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHHHHHHHHH
Q 018098 294 GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG-GIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 294 ~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~-~~~~~l~~~~~~~~~~~~~~ 352 (361)
.|++..+|+.+|..+..+|++++|...|+++++++|.+. .++..++.+..+.++.+++.
T Consensus 317 ~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~ 376 (530)
T 2ooe_A 317 LKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGR 376 (530)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHH
Confidence 999999999999999999999999999999999999986 58888888877777665543
No 229
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.62 E-value=1.4e-07 Score=72.29 Aligned_cols=73 Identities=22% Similarity=0.270 Sum_probs=67.1
Q ss_pred HHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 281 KGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 281 ~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
++|+..++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|.+..++..++.+...+++..++..
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 74 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQ 74 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 4688999999999999999999999999999999999999999999999999999999999888877766543
No 230
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.60 E-value=6.8e-08 Score=93.81 Aligned_cols=116 Identities=10% Similarity=-0.029 Sum_probs=94.9
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+.++|..+..+|+|++|+.+|+++|.+....... .+|.....++|||.+|..+|+|++|+..+++
T Consensus 349 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~----------~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~ 418 (490)
T 3n71_A 349 YVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHH----------NNAQLGMAVMRAGLTNWHAGHIEVGHGMICK 418 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCT----------TCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCC----------CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 357888999999999999999999999999966543222 4678889999999999999999999999999
Q ss_pred Hhhc-----CCC---chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHH
Q 018098 290 AMRD-----GDD---NVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIK 335 (361)
Q Consensus 290 al~~-----~p~---~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~ 335 (361)
||++ .|+ ..+..-.+++++..++.|++|...|.++.+-.-+|+.++
T Consensus 419 Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~~~~~~~~ 472 (490)
T 3n71_A 419 AYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQPMQ 472 (490)
T ss_dssp HHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 9954 444 467778899999999999999999999877554555554
No 231
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.59 E-value=2.2e-07 Score=90.12 Aligned_cols=80 Identities=18% Similarity=0.039 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHh----cCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCC---
Q 018098 262 TKSQIFTNSSACKLK----LGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPN--- 330 (361)
Q Consensus 262 ~~~~~~~nla~~~~~----l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~--- 330 (361)
.+..+++++|.+|.. .+++++|+.++++|++.. ++.+++++|.+|.. .+++++|+.+|+++++.+|+
T Consensus 361 ~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~--~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~ 438 (490)
T 2xm6_A 361 GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG--LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFG 438 (490)
T ss_dssp TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHH
T ss_pred CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcC
Confidence 346789999999999 899999999999999875 68999999999998 89999999999999999954
Q ss_pred CHHHHHHHHHHHH
Q 018098 331 DGGIKKELAVAKK 343 (361)
Q Consensus 331 ~~~~~~~l~~~~~ 343 (361)
+..+...++.+..
T Consensus 439 ~~~a~~~l~~~~~ 451 (490)
T 2xm6_A 439 TENRNITEKKLTA 451 (490)
T ss_dssp HHHHHHHHTTSCH
T ss_pred CHHHHHHHHhcCH
Confidence 7777777776644
No 232
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.56 E-value=4.5e-07 Score=84.16 Aligned_cols=132 Identities=15% Similarity=-0.009 Sum_probs=103.0
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~ 288 (361)
.-.+..+...|..++..|++++|+..+++++...+.. .......++.++|.++...|++++|+..++
T Consensus 11 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~~~~-------------~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 77 (373)
T 1hz4_A 11 TMHAEFNALRAQVAINDGNPDEAERLAKLALEELPPG-------------WFYSRIVATSVLGEVLHCKGELTRSLALMQ 77 (373)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT-------------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC-------------chhHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 3356778888999999999999999999999843210 112345678999999999999999999999
Q ss_pred HHhhcCCCc------hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCC--------CCHHHHHHHHHHHHHHHHHHHHHH
Q 018098 289 FAMRDGDDN------VKALFRQGQAYMALNDVDAAVESFEKALKLEP--------NDGGIKKELAVAKKKIHERREQEK 353 (361)
Q Consensus 289 ~al~~~p~~------~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P--------~~~~~~~~l~~~~~~~~~~~~~~k 353 (361)
+++.+.|.. ..++..+|.++..+|++++|+..+++++++.+ ....+...++.+.....+.+++..
T Consensus 78 ~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 156 (373)
T 1hz4_A 78 QTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEA 156 (373)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999876644 34578899999999999999999999999863 233455667777666666555443
No 233
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.39 E-value=1.5e-06 Score=69.28 Aligned_cols=94 Identities=21% Similarity=0.079 Sum_probs=82.2
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHH
Q 018098 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQ 304 (361)
Q Consensus 225 ~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~ 304 (361)
.+++++|+.+|+++.+ .. +..+. +|.+|...+.+++|+.++++|.+. .++.+++++
T Consensus 8 ~~d~~~A~~~~~~aa~------------------~g--~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~L 63 (138)
T 1klx_A 8 KKDLKKAIQYYVKACE------------------LN--EMFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFL 63 (138)
T ss_dssp HHHHHHHHHHHHHHHH------------------TT--CTTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHc------------------CC--CHhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHH
Confidence 5789999999999987 22 12233 999999999999999999999998 589999999
Q ss_pred HHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 305 GQAYMA----LNDVDAAVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 305 a~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
|.+|.. .+++++|+.+|+++.+. .++.+...++.+...
T Consensus 64 g~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 64 GDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 999998 89999999999999987 688899999988776
No 234
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.39 E-value=1.5e-06 Score=83.57 Aligned_cols=109 Identities=14% Similarity=0.006 Sum_probs=66.2
Q ss_pred hHHHHHhcchhHHhh---hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc----CChHHHH
Q 018098 212 VDSIKVFGNEHYKKQ---DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL----GDLKGAL 284 (361)
Q Consensus 212 a~~~~~~G~~~~~~g---~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l----~~~~~Al 284 (361)
...+..+|..+...| ++++|+.+|+++++ ..+.....++++|.+|... +++++|+
T Consensus 176 ~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~------------------~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~ 237 (452)
T 3e4b_A 176 DICYVELATVYQKKQQPEQQAELLKQMEAGVS------------------RGTVTAQRVDSVARVLGDATLGTPDEKTAQ 237 (452)
T ss_dssp TTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH------------------TTCSCHHHHHHHHHHHTCGGGSSCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCcccHHHHHHHHHHHHH------------------CCCHHHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 346788899999999 99999999999987 3333344445555555443 4555555
Q ss_pred HHHHHHhhcCCCchhhHhHHHHH-H--HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 018098 285 LDTEFAMRDGDDNVKALFRQGQA-Y--MALNDVDAAVESFEKALKLEPNDGGIKKELAVAKK 343 (361)
Q Consensus 285 ~~~~~al~~~p~~~ka~~~~a~a-~--~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 343 (361)
.+++++. |.++.+++++|.+ + ...+++++|+.+|+++.+. +++.+...++.+..
T Consensus 238 ~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~ 294 (452)
T 3e4b_A 238 ALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY 294 (452)
T ss_dssp HHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 5555555 5555555555555 3 3445555555555555543 24555555554443
No 235
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.38 E-value=3e-06 Score=82.03 Aligned_cols=109 Identities=16% Similarity=0.080 Sum_probs=75.0
Q ss_pred hhHHHHHhcchhHH----hhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh----cCChHH
Q 018098 211 AVDSIKVFGNEHYK----KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK----LGDLKG 282 (361)
Q Consensus 211 ~a~~~~~~G~~~~~----~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~----l~~~~~ 282 (361)
.+..+..+|..++. .+++++|+.+|+++++ . .+..+++++|.+|.. .+++++
T Consensus 38 ~~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~------------------~--~~~~a~~~Lg~~y~~g~g~~~~~~~ 97 (490)
T 2xm6_A 38 EAKAQLELGYRYFQGNETTKDLTQAMDWFRRAAE------------------Q--GYTPAEYVLGLRYMNGEGVPQDYAQ 97 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH------------------T--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred CHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHH------------------C--CCHHHHHHHHHHHHcCCCCCCCHHH
Confidence 46778888888888 8899999999999876 1 234566667777666 666777
Q ss_pred HHHHHHHHhhcCCCchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 018098 283 ALLDTEFAMRDGDDNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPNDGGIKKELAVAKK 343 (361)
Q Consensus 283 Al~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~ 343 (361)
|+.+++++++.+ ++.+++++|.+|.. .+++++|+..|+++.+. ++..+...++.+..
T Consensus 98 A~~~~~~a~~~~--~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~ 158 (490)
T 2xm6_A 98 AVIWYKKAALKG--LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYF 158 (490)
T ss_dssp HHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCC--CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
Confidence 777777766543 56666666666666 66666677666666554 35556666665544
No 236
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.37 E-value=2.2e-06 Score=79.30 Aligned_cols=121 Identities=11% Similarity=0.038 Sum_probs=83.1
Q ss_pred hHHHHHhcchhHH---hhhHHHHHHHHHHHHhhhccccc--------------cCCCCccc------------hhHHHHH
Q 018098 212 VDSIKVFGNEHYK---KQDYKMALRKYRKALRYLDICWE--------------KEGIDEGK------------SSSLRKT 262 (361)
Q Consensus 212 a~~~~~~G~~~~~---~g~y~~A~~~y~~al~~~~~~~~--------------~~~~~~~~------------~~~~~~~ 262 (361)
|-.++-.|..++. ...+.+|+.+|++|+++-+.... ........ ....++.
T Consensus 196 Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~ 275 (372)
T 3ly7_A 196 LLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNN 275 (372)
T ss_dssp GHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCc
Confidence 4445555555554 45678999999999985442100 00011000 0022344
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGG 333 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~ 333 (361)
.+.++.-++.+++..|++++|+..+++|+.++| ++-+|..+|.++...|++++|++.|++|+.++|..+.
T Consensus 276 ~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 276 LSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 555666677777778999999999999999986 4677888899999999999999999999999997653
No 237
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.35 E-value=2.1e-06 Score=76.43 Aligned_cols=90 Identities=16% Similarity=0.176 Sum_probs=81.5
Q ss_pred HhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHH--HHHHHHHHHHHHHhc-----CChHHHHHHHHHHhhcCCC
Q 018098 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT--KSQIFTNSSACKLKL-----GDLKGALLDTEFAMRDGDD 296 (361)
Q Consensus 224 ~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~l-----~~~~~Al~~~~~al~~~p~ 296 (361)
..+....|...+++|++ ++|. ...+|.-+|..|.++ |+.++|..++++||+++|+
T Consensus 175 Al~~l~~A~a~lerAle------------------LDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~ 236 (301)
T 3u64_A 175 LPDTVHAAVMMLERACD------------------LWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA 236 (301)
T ss_dssp CHHHHHHHHHHHHHHHH------------------HCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT
T ss_pred HHHhHHHHHHHHHHHHH------------------hCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 45677899999999999 8887 677999999999996 9999999999999999997
Q ss_pred c-hhhHhHHHHHHHh-cCCHHHHHHHHHHHHHhCCCC
Q 018098 297 N-VKALFRQGQAYMA-LNDVDAAVESFEKALKLEPND 331 (361)
Q Consensus 297 ~-~ka~~~~a~a~~~-l~~~~~A~~~~~~al~l~P~~ 331 (361)
. ..+++..|..+.. ++++++|.+.+++++..+|..
T Consensus 237 ~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 237 HDPDHHITYADALCIPLNNRAGFDEALDRALAIDPES 273 (301)
T ss_dssp TCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGG
T ss_pred CCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCC
Confidence 5 9999999999988 599999999999999998873
No 238
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.28 E-value=9.1e-06 Score=76.64 Aligned_cols=120 Identities=11% Similarity=-0.004 Sum_probs=74.0
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccccc---------------CCCCccchhH-------------HHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEK---------------EGIDEGKSSS-------------LRKT 262 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~---------------~~~~~~~~~~-------------~~~~ 262 (361)
...++..+|..+++.|+|++|+++|.+++.+....... .....+.... ....
T Consensus 54 ~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 133 (434)
T 4b4t_Q 54 QETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFL 133 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHH
Confidence 45678899999999999999999999998865432100 0000000000 0111
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhc------CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRD------GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN 330 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~------~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 330 (361)
...++.++|.+|..+|+|.+|+..+++++.. .+....++...|.+|..+|++++|...|++++.+.+.
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 2345666677777777777777766666643 2223556666677777777777777777777666543
No 239
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.27 E-value=3.5e-06 Score=67.91 Aligned_cols=79 Identities=10% Similarity=0.010 Sum_probs=68.0
Q ss_pred hhHHHHHhcchhHHhh---hHHHHHHHHHHHHhhhccccccCCCCccchhHHH-H-HHHHHHHHHHHHHHhcCChHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQ---DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLR-K-TKSQIFTNSSACKLKLGDLKGALL 285 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g---~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~nla~~~~~l~~~~~Al~ 285 (361)
..+..++.|..+.+.+ ++++++..+++.++ .+ | ....+++++|..|+++++|++|+.
T Consensus 31 ~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~------------------~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 31 SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLP------------------KGSKEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH------------------HSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh------------------cCCccchHHHHHHHHHHHHHccCHHHHHH
Confidence 3577888899998877 88899999999998 44 5 567899999999999999999999
Q ss_pred HHHHHhhcCCCchhhHhHHHHH
Q 018098 286 DTEFAMRDGDDNVKALFRQGQA 307 (361)
Q Consensus 286 ~~~~al~~~p~~~ka~~~~a~a 307 (361)
+++++|+++|+|..|..-+-.+
T Consensus 93 y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 93 YVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCHHHHHHHHHH
Confidence 9999999999998887665443
No 240
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.20 E-value=7.4e-06 Score=86.91 Aligned_cols=108 Identities=21% Similarity=0.239 Sum_probs=89.0
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+...|..++..|+|++|+.+|.+|- -|..+|.|+.++|+|++|++.+.+|..
T Consensus 1196 ad~~~iGd~le~eg~YeeA~~~Y~kA~--------------------------ny~rLA~tLvkLge~q~AIEaarKA~n 1249 (1630)
T 1xi4_A 1196 AHIQQVGDRCYDEKMYDAAKLLYNNVS--------------------------NFGRLASTLVHLGEYQAAVDGARKANS 1249 (1630)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHhhh--------------------------HHHHHHHHHHHhCCHHHHHHHHHHhCC
Confidence 356779999999999999999999863 478889999999999999999998855
Q ss_pred cCC-------------------------CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 018098 293 DGD-------------------------DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 293 ~~p-------------------------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 346 (361)
..+ .++..+..++..|..+|.|++|+..|++++.++|.+..+...++.+..+-+
T Consensus 1250 ~~aWkev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1250 TRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 443 123445567778889999999999999999999999999988888866543
No 241
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.19 E-value=6.4e-06 Score=77.71 Aligned_cols=138 Identities=9% Similarity=-0.011 Sum_probs=89.9
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
....+.|..+.+.|+|++|++.|.++++..+........ ........+....++.++|.+|..+|+|++|++.+.+++.
T Consensus 5 ~~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 5 GSKLEEARRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAG-ASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTE 83 (434)
T ss_dssp THHHHHHHHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSS-SSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccchhHHH-HHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 345667778889999999999999999854322111111 1111223445567889999999999999999999999987
Q ss_pred cCCCchh------hHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHHHHHHHH
Q 018098 293 DGDDNVK------ALFRQGQAYMALNDVDAAVESFEKALKLEPND------GGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 293 ~~p~~~k------a~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~------~~~~~~l~~~~~~~~~~~~~ 351 (361)
+.+...+ +...++.++...|++++|+..+++++.+.+.. ..+...++.+....+++.++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 154 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDS 154 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHH
Confidence 6544322 23345666666777777777777776654321 33555566665555555443
No 242
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.17 E-value=1.1e-05 Score=77.61 Aligned_cols=107 Identities=15% Similarity=0.021 Sum_probs=74.5
Q ss_pred hhhHHHHHhcch-h--HHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcC-----ChH
Q 018098 210 NAVDSIKVFGNE-H--YKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-----DLK 281 (361)
Q Consensus 210 ~~a~~~~~~G~~-~--~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~-----~~~ 281 (361)
..+..+..+|.. + ...+++++|+.+|+++++ .....+++++|.+|. .| +++
T Consensus 246 g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~--------------------~g~~~A~~~Lg~~y~-~G~g~~~d~~ 304 (452)
T 3e4b_A 246 GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRA--------------------ADQPRAELLLGKLYY-EGKWVPADAK 304 (452)
T ss_dssp GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHH--------------------TTCHHHHHHHHHHHH-HCSSSCCCHH
T ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH--------------------CCCHHHHHHHHHHHH-cCCCCCCCHH
Confidence 346677777877 3 467888999999988875 224567777777776 44 777
Q ss_pred HHHHHHHHHhhcCCCchhhHhHHHHHHHh----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 282 GALLDTEFAMRDGDDNVKALFRQGQAYMA----LNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 282 ~Al~~~~~al~~~p~~~ka~~~~a~a~~~----l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
+|+.++.+|+ +.++.+++++|.+|.. ..++++|+.+|+++.+. +++.+...++.+.
T Consensus 305 ~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y 364 (452)
T 3e4b_A 305 AAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARN--GQNSADFAIAQLF 364 (452)
T ss_dssp HHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTT--TCTTHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhh--ChHHHHHHHHHHH
Confidence 7777777777 6777777777777766 33777777777777653 3455555555553
No 243
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.17 E-value=2.6e-05 Score=60.80 Aligned_cols=86 Identities=13% Similarity=0.074 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHhcCC---hHHHHHHHHHHhhcCCC-chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGD---LKGALLDTEFAMRDGDD-NVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~---~~~Al~~~~~al~~~p~-~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
.....+|+|.|..+-.+ ..++|..++..++.+|. .-..+|.+|.+++.+|+|++|..+.+.+++++|+|..+....
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk 118 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 118 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHH
Confidence 34567888888888765 56799999999999984 578999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH
Q 018098 339 AVAKKKIHER 348 (361)
Q Consensus 339 ~~~~~~~~~~ 348 (361)
..+..++.+.
T Consensus 119 ~~Ie~ki~kd 128 (134)
T 3o48_A 119 SMVEDKIQKE 128 (134)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 8888887654
No 244
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.13 E-value=1.1e-05 Score=73.09 Aligned_cols=123 Identities=9% Similarity=0.022 Sum_probs=94.4
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHH--HHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK--TKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
..+...|.++...|++++|+..+.+++. ..+ ....++..++.+++++|+.+.|.+.+++.
T Consensus 101 ~~~~~la~i~~~~g~~eeAL~~l~~~i~------------------~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 101 YELYLLATAQAILGDLDKSLETCVEGID------------------NDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHT------------------SSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHhc------------------cCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3456889999999999999999999987 332 67788999999999999999999999999
Q ss_pred hhcCCC----chhhHhHHHHH--HHhcC--CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 291 MRDGDD----NVKALFRQGQA--YMALN--DVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKK 354 (361)
Q Consensus 291 l~~~p~----~~ka~~~~a~a--~~~l~--~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~ 354 (361)
.+.+|+ +......++.+ ....| ++++|...|+++.+..|+.......+. +...+++..++++.
T Consensus 163 ~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln-~~~~~g~~~eAe~~ 233 (310)
T 3mv2_B 163 TNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN-LHLQQRNIAEAQGI 233 (310)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH-HHHHHTCHHHHHHH
T ss_pred HhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH-HHHHcCCHHHHHHH
Confidence 999994 33445555544 66556 999999999999888886233233333 66666666665544
No 245
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.11 E-value=4.5e-05 Score=60.21 Aligned_cols=85 Identities=13% Similarity=0.074 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHhcCC---hHHHHHHHHHHhhcCCC-chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGD---LKGALLDTEFAMRDGDD-NVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~---~~~Al~~~~~al~~~p~-~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
.....+|+|.|+.+-.+ ..+++..++..++.+|. .-..+|.+|.+++.+|+|++|..+++..++++|+|..+..+.
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 44567888888888765 56799999999998884 578999999999999999999999999999999999999888
Q ss_pred HHHHHHHHH
Q 018098 339 AVAKKKIHE 347 (361)
Q Consensus 339 ~~~~~~~~~ 347 (361)
..+..++..
T Consensus 118 ~~Ie~~i~k 126 (144)
T 1y8m_A 118 SMVEDKIQK 126 (144)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777643
No 246
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.08 E-value=1.5e-05 Score=75.61 Aligned_cols=115 Identities=18% Similarity=0.152 Sum_probs=79.3
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHH
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL 284 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al 284 (361)
.......+..+..+|..+++.|+|++|++.|.+|.. ...|...+.++...|+|+.|.
T Consensus 141 A~~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~~-----------------------~~~Wk~v~~aCv~~~ef~lA~ 197 (449)
T 1b89_A 141 AKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANS-----------------------TRTWKEVCFACVDGKEFRLAQ 197 (449)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHTC-----------------------HHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcCC-----------------------chhHHHHHHHHHHcCcHHHHH
Confidence 334444555566666666666666666666666632 345566666666677777774
Q ss_pred HHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 018098 285 LDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 285 ~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~ 346 (361)
..... |..+|+. ...+...|...|++++|+..+++++.+++....+...++.+..+.+
T Consensus 198 ~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 198 MCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp HTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred HHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 44442 4455544 3356678999999999999999999999999999999988876653
No 247
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.03 E-value=7.1e-06 Score=60.71 Aligned_cols=69 Identities=10% Similarity=0.032 Sum_probs=62.2
Q ss_pred hhHHHHHhcchhHHhhh---HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQD---YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDT 287 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~---y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~ 287 (361)
.+..+...|..++..++ .++|...+++|++ ++|.+..++..+|..+++.|+|++|+.++
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~------------------~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w 66 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ------------------LEPYNEAALSLIANDHFISFRFQEAIDTW 66 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH------------------HCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH------------------HCcCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 35677788888875555 7999999999999 99999999999999999999999999999
Q ss_pred HHHhhcCCCc
Q 018098 288 EFAMRDGDDN 297 (361)
Q Consensus 288 ~~al~~~p~~ 297 (361)
+++++.+|..
T Consensus 67 ~~~l~~~p~~ 76 (93)
T 3bee_A 67 VLLLDSNDPN 76 (93)
T ss_dssp HHHHTCCCTT
T ss_pred HHHHhhCCCC
Confidence 9999999984
No 248
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.00 E-value=4e-05 Score=81.47 Aligned_cols=110 Identities=16% Similarity=0.116 Sum_probs=84.2
Q ss_pred HHhcchhHHhhhHHHHHHHHHHHHhhhcc---cccc-CCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 216 KVFGNEHYKKQDYKMALRKYRKALRYLDI---CWEK-EGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 216 ~~~G~~~~~~g~y~~A~~~y~~al~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
.+.|..+...|.|++|+..|+++-..... +... .................+|.++|.++...|++++|+..|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 34688999999999999999987643321 1100 011111111112355688999999999999999999999887
Q ss_pred hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC
Q 018098 292 RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN 330 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~ 330 (361)
+++.+|++.|.++..+|+|++|+++|.+|.+..+.
T Consensus 1132 ----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred ----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 78999999999999999999999999999998854
No 249
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.95 E-value=3.8e-05 Score=68.38 Aligned_cols=140 Identities=14% Similarity=0.017 Sum_probs=95.4
Q ss_pred hHHHHhhhHHHHHhcchhHHh--------------hhHHHHHHHHHHHHhhhccccccC-CC--------C----ccchh
Q 018098 205 LSWWMNAVDSIKVFGNEHYKK--------------QDYKMALRKYRKALRYLDICWEKE-GI--------D----EGKSS 257 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~--------------g~y~~A~~~y~~al~~~~~~~~~~-~~--------~----~~~~~ 257 (361)
.......+.-+...|+.+.+. .++..|...|.++.++........ +. + ++...
T Consensus 66 ~~Ll~~~a~ly~~Ya~afV~~~a~~~~~~~~~~~~~~~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~ 145 (301)
T 3u64_A 66 RGLSLAVGRLYIMYANAFVQTPAQYLPEDEFEAQNEAYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLS 145 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhcchhhHhhhhhhHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHH
Confidence 334444555555556655543 357788899998888876432221 10 0 11122
Q ss_pred HHHHHHHHHHHHHHHHHHh-----cCC------hHHHHHHHHHHhhcCCC--chhhHhHHHHHHHhc-----CCHHHHHH
Q 018098 258 SLRKTKSQIFTNSSACKLK-----LGD------LKGALLDTEFAMRDGDD--NVKALFRQGQAYMAL-----NDVDAAVE 319 (361)
Q Consensus 258 ~~~~~~~~~~~nla~~~~~-----l~~------~~~Al~~~~~al~~~p~--~~ka~~~~a~a~~~l-----~~~~~A~~ 319 (361)
..++.++.+++=.|..... .+. ...|....++||++||+ +..+|..+|..|..+ |+.++|.+
T Consensus 146 ~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~ 225 (301)
T 3u64_A 146 RCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHT 225 (301)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHH
T ss_pred HcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHH
Confidence 3345555555555554432 232 57889999999999999 577999999999996 99999999
Q ss_pred HHHHHHHhCCCC-HHHHHHHHHHHHH
Q 018098 320 SFEKALKLEPND-GGIKKELAVAKKK 344 (361)
Q Consensus 320 ~~~~al~l~P~~-~~~~~~l~~~~~~ 344 (361)
.|++|++++|+. ..+...+++....
T Consensus 226 ~ferAL~LnP~~~id~~v~YA~~l~~ 251 (301)
T 3u64_A 226 AFEHLTRYCSAHDPDHHITYADALCI 251 (301)
T ss_dssp HHHHHHHHCCTTCSHHHHHHHHHTTT
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHH
Confidence 999999999974 7887777776554
No 250
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.93 E-value=1.4e-05 Score=76.34 Aligned_cols=92 Identities=9% Similarity=0.056 Sum_probs=74.4
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..+..+.++|..+..+|+|++|+.+|+++|.+....... .+|.....++|+|.+|..+|+|++|+..+++
T Consensus 327 ~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~----------~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~ 396 (429)
T 3qwp_A 327 YQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG----------SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRL 396 (429)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS----------SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC----------CChHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 368889999999999999999999999999976544222 4678889999999999999999999999999
Q ss_pred Hhhc-----CCCc---hhhHhHHHHHHHhc
Q 018098 290 AMRD-----GDDN---VKALFRQGQAYMAL 311 (361)
Q Consensus 290 al~~-----~p~~---~ka~~~~a~a~~~l 311 (361)
|+++ .|+. ..++.+++.+...+
T Consensus 397 Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 397 AFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 9954 4444 45556666665544
No 251
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.91 E-value=5.2e-05 Score=68.68 Aligned_cols=114 Identities=7% Similarity=-0.056 Sum_probs=86.0
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHH----HHHHHHHHHHH--HHhcC--ChHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKT----KSQIFTNSSAC--KLKLG--DLKGA 283 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~nla~~--~~~l~--~~~~A 283 (361)
.+.+...+..+.+.|+.+.|.+.+++..+ .+|. .-.+..+++.. .+..| ++++|
T Consensus 136 lea~~l~vqi~L~~~r~d~A~k~l~~~~~------------------~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A 197 (310)
T 3mv2_B 136 TELLLLAIEVALLNNNVSTASTIFDNYTN------------------AIEDTVSGDNEMILNLAESYIKFATNKETATSN 197 (310)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh------------------cCccccccchHHHHHHHHHHHHHHhCCccHHHH
Confidence 34445566778899999999999999876 4441 22344555544 55556 99999
Q ss_pred HHHHHHHhhcCCC--chhhHhHHHHHHHhcCCHHHHHHHHHHHHHh----------CCCCHHHHHHHHHHHHHHH
Q 018098 284 LLDTEFAMRDGDD--NVKALFRQGQAYMALNDVDAAVESFEKALKL----------EPNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 284 l~~~~~al~~~p~--~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l----------~P~~~~~~~~l~~~~~~~~ 346 (361)
...|+++....|+ ....+++ +++.+|++++|.+.++.++++ +|+|+.+..++..+...+.
T Consensus 198 ~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lg 269 (310)
T 3mv2_B 198 FYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQG 269 (310)
T ss_dssp HHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhC
Confidence 9999999998887 3445555 899999999999999988887 5889999877766655544
No 252
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.86 E-value=2.1e-05 Score=75.10 Aligned_cols=73 Identities=10% Similarity=-0.000 Sum_probs=63.9
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+..+.++|..+..+|+|++|+.+|+++|.+....... .+|.....++|||.+|..+|+|++|+..+++|
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~----------~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~A 408 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPV----------YSLNVASMWLKLGRLYMGLENKAAGEKALKKA 408 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCS----------SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCC----------CChHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 57888999999999999999999999999976543222 36788899999999999999999999999999
Q ss_pred hhc
Q 018098 291 MRD 293 (361)
Q Consensus 291 l~~ 293 (361)
+++
T Consensus 409 l~i 411 (433)
T 3qww_A 409 IAI 411 (433)
T ss_dssp HHH
T ss_pred HHH
Confidence 964
No 253
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.83 E-value=1.1e-05 Score=76.61 Aligned_cols=127 Identities=13% Similarity=0.009 Sum_probs=51.6
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccccc---------CCCCccchhHHHHHHHHHHHHHHHHHHhcCChHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEK---------EGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKG 282 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~ 282 (361)
...+...+..+...|+|++|+.+++.+++..+..... -....+...-+...+...|.++|.++...|+|++
T Consensus 61 ~~~y~~V~~~ae~~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~pn~~a~~~IGd~~~~~g~yee 140 (449)
T 1b89_A 61 PSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDA 140 (449)
T ss_dssp ------------------------------------------------CHHHHTTTTTCC----------------CTTT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcCCcHHHHHHHHHHHHHcCCHHH
Confidence 4466777778888899999999888887643211000 0000111111112233489999999999999999
Q ss_pred HHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Q 018098 283 ALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQ 351 (361)
Q Consensus 283 Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~ 351 (361)
|+.+|+++ ..|.++|.++..+|+|++|++.++++ ++...|+....+...+++.+.+
T Consensus 141 A~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA 196 (449)
T 1b89_A 141 AKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLA 196 (449)
T ss_dssp HHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHH
Confidence 99999977 58899999999999999999999999 4677777777776666555444
No 254
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.78 E-value=0.00016 Score=58.59 Aligned_cols=118 Identities=9% Similarity=0.037 Sum_probs=85.1
Q ss_pred HHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 214 ~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
.+++....++..+.|+.|+..+..++.+.+.- ++. --......++..+|..++..++|..|+..|++||.+
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~---~~~------~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~ 92 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNN---PEL------FSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQ 92 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS---TTS------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCC---ccc------ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 45666778889999999999999988843210 000 012234567899999999999999999999999833
Q ss_pred CC-------------------------CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 018098 294 GD-------------------------DNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVA 341 (361)
Q Consensus 294 ~p-------------------------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~ 341 (361)
.. ...+..|+.|.||..++++++|+..++..-.- -..+.+...|+++
T Consensus 93 ~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip~k-~Rt~kvnm~LakL 164 (167)
T 3ffl_A 93 KKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIPSR-QRTPKINMLLANL 164 (167)
T ss_dssp HHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSCGG-GCCHHHHHHHHHH
T ss_pred HHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCCch-hcCHHHHHHHHHH
Confidence 11 11368899999999999999999987653111 1356666666665
No 255
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.43 E-value=0.00049 Score=53.35 Aligned_cols=78 Identities=9% Similarity=-0.046 Sum_probs=58.1
Q ss_pred hHHHHHhcchhHHhhhHHH---HHHHHHHHHhhhccccccCCCCccchhHHH-H-HHHHHHHHHHHHHHhcCChHHHHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKM---ALRKYRKALRYLDICWEKEGIDEGKSSSLR-K-TKSQIFTNSSACKLKLGDLKGALLD 286 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~---A~~~y~~al~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~nla~~~~~l~~~~~Al~~ 286 (361)
....++.|..+.+..+-.. +|..++..++ .. | ..-.+++.+|..++++|+|.+|+.+
T Consensus 35 ~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~------------------~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~ 96 (126)
T 1nzn_A 35 KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLP------------------KGSKEEQRDYVFYLAVGNYRLKEYEKALKY 96 (126)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTT------------------TSCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh------------------cCCcchHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 3445556666665554443 7777777665 12 2 5667899999999999999999999
Q ss_pred HHHHhhcCCCchhhHhHHHHH
Q 018098 287 TEFAMRDGDDNVKALFRQGQA 307 (361)
Q Consensus 287 ~~~al~~~p~~~ka~~~~a~a 307 (361)
|+.+|+++|+|..|..-+..+
T Consensus 97 ~~~lL~~eP~n~QA~~Lk~~i 117 (126)
T 1nzn_A 97 VRGLLQTEPQNNQAKELERLI 117 (126)
T ss_dssp HHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHH
Confidence 999999999998876655443
No 256
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.35 E-value=0.0025 Score=59.79 Aligned_cols=114 Identities=14% Similarity=0.063 Sum_probs=90.6
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc-cc-c--CCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC-WE-K--EGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTE 288 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~-~~-~--~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~ 288 (361)
+.+...|......++...|+..+.+|+.+..-- .+ . ..+.......+......+...++.+++.+|++.+|+..+.
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 334445555666789999999999999976421 11 1 1111233456677777888899999999999999999999
Q ss_pred HHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHH
Q 018098 289 FAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALK 326 (361)
Q Consensus 289 ~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 326 (361)
.++..+|.+..++..+-.++...|+..+|++.|+++-+
T Consensus 196 ~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 196 ALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988755
No 257
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.32 E-value=0.00057 Score=55.41 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=66.2
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCC-----Cccch--hHHHHHHHHHHHHHHHHHHhcCChHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGI-----DEGKS--SSLRKTKSQIFTNSSACKLKLGDLKGA 283 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~nla~~~~~l~~~~~A 283 (361)
.++.+...|+.+|.+++|..|...|++||.+.+.+...... +.... ....+....+.+.+|.||.+++++++|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 57788999999999999999999999999877644222110 00000 000123456889999999999999999
Q ss_pred HHHHHHHhhcCCCchhhHhHHHHHH
Q 018098 284 LLDTEFAMRDGDDNVKALFRQGQAY 308 (361)
Q Consensus 284 l~~~~~al~~~p~~~ka~~~~a~a~ 308 (361)
+...+.+-... ..++...-+|..|
T Consensus 142 i~~Le~Ip~k~-Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGIPSRQ-RTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTSCGGG-CCHHHHHHHHHHC
T ss_pred HHHHhcCCchh-cCHHHHHHHHHHh
Confidence 99876543322 4677777777665
No 258
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.17 E-value=0.0025 Score=49.58 Aligned_cols=76 Identities=11% Similarity=0.042 Sum_probs=55.0
Q ss_pred HHHHhcchhHHhh---hHHHHHHHHHHHHhhhccccccCCCCccchhHHHH-HHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 018098 214 SIKVFGNEHYKKQ---DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK-TKSQIFTNSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 214 ~~~~~G~~~~~~g---~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~nla~~~~~l~~~~~Al~~~~~ 289 (361)
..++.+..+.+.. +..++|..++..++ ..| ..-.+++.+|..+.++|+|.+|+.+++.
T Consensus 42 t~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~------------------~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~ 103 (134)
T 3o48_A 42 SRFNYAWGLIKSTDVNDERLGVKILTDIYK------------------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDT 103 (134)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHH------------------HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHHHh------------------cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3444444444433 44456666666555 233 4667899999999999999999999999
Q ss_pred HhhcCCCchhhHhHHHHH
Q 018098 290 AMRDGDDNVKALFRQGQA 307 (361)
Q Consensus 290 al~~~p~~~ka~~~~a~a 307 (361)
+|+++|+|..|..-+..+
T Consensus 104 lL~~eP~N~QA~~Lk~~I 121 (134)
T 3o48_A 104 LFEHERNNKQVGALKSMV 121 (134)
T ss_dssp HHTTCTTCHHHHHHHHHH
T ss_pred HHhhCCCCHHHHHHHHHH
Confidence 999999998876655443
No 259
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.97 E-value=0.0035 Score=49.41 Aligned_cols=45 Identities=11% Similarity=0.020 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHH
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQ 306 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~ 306 (361)
..-.+++.+|..+.++|+|.+|+.+++.+|+++|+|..|..-+..
T Consensus 75 ~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~ 119 (144)
T 1y8m_A 75 RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSM 119 (144)
T ss_dssp THHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 355689999999999999999999999999999999777655443
No 260
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.96 E-value=0.0036 Score=63.03 Aligned_cols=104 Identities=9% Similarity=-0.006 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHH-HHHHHHhhcCCCchhhHhHHHH
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGAL-LDTEFAMRDGDDNVKALFRQGQ 306 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al-~~~~~al~~~p~~~ka~~~~a~ 306 (361)
.+.....|++||. ..|....+|...|..+...++.++|+ ..+++|+...|.+...|+..+.
T Consensus 325 ~~Rv~~~Ye~aL~------------------~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~ 386 (679)
T 4e6h_A 325 KARMTYVYMQAAQ------------------HVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSE 386 (679)
T ss_dssp HHHHHHHHHHHHH------------------HTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHH------------------HcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 4556778999998 66778899999999999999999997 9999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHHHHh-----------CCC-----------CHHHHHHHHHHHHHHHHHH
Q 018098 307 AYMALNDVDAAVESFEKALKL-----------EPN-----------DGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 307 a~~~l~~~~~A~~~~~~al~l-----------~P~-----------~~~~~~~l~~~~~~~~~~~ 349 (361)
.....|+++.|...|+++++. .|. ...++.....+..+.+..+
T Consensus 387 ~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~ 451 (679)
T 4e6h_A 387 QYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLA 451 (679)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHH
Confidence 999999999999999999985 253 2346777777766665543
No 261
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.94 E-value=0.0076 Score=60.62 Aligned_cols=132 Identities=10% Similarity=0.033 Sum_probs=88.1
Q ss_pred HhcchhHHhhhHHHHHHHHHHHHhhhcccc----ccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 217 VFGNEHYKKQDYKMALRKYRKALRYLDICW----EKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 217 ~~G~~~~~~g~y~~A~~~y~~al~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+....+.|+++.|...|++++..+.... +..+..++....+......+|...+....+.+..+.|...+.+|+.
T Consensus 383 ~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~ 462 (679)
T 4e6h_A 383 SLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRR 462 (679)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344444456677777777777776331100 0000000111112223455788888888888999999999999998
Q ss_pred c-CCCchhhHhHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 018098 293 D-GDDNVKALFRQGQAYMALN-DVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHER 348 (361)
Q Consensus 293 ~-~p~~~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 348 (361)
. .+...+.|...|..-...+ +++.|...|+++++..|+++..+.........+.+.
T Consensus 463 ~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~ 520 (679)
T 4e6h_A 463 LKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEE 520 (679)
T ss_dssp TGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCH
T ss_pred hcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCH
Confidence 8 5555777777777666665 589999999999999999999987777766555443
No 262
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.0069 Score=61.25 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHH
Q 018098 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKA 324 (361)
Q Consensus 261 ~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~a 324 (361)
+....++.-=|..++..++|+-|+..+++|....|...+.|++++.+|..+|+|+.|+-.+..+
T Consensus 334 ~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 334 NCMSDLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred CcchHHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 3334455555777778999999999999999999999999999999999999999999877665
No 263
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.73 E-value=0.017 Score=45.87 Aligned_cols=97 Identities=11% Similarity=0.021 Sum_probs=78.8
Q ss_pred hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHH
Q 018098 227 DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQ 306 (361)
Q Consensus 227 ~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~ 306 (361)
-.+.-++.|++|+.-++-. . .......+.+|.+.|.. ..+++.++|.+.|+.++.++...++.|...|+
T Consensus 34 ~l~rlrd~YerAia~~Pp~---------k-~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~Aq 102 (161)
T 4h7y_A 34 LLNKLIGRYSQAIEALPPD---------K-YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQ 102 (161)
T ss_dssp HHHHHHHHHHHHHHHSCGG---------G-GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcc---------c-cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 3378889999999844321 1 22445667788888865 67899999999999999998888888888888
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 018098 307 AYMALNDVDAAVESFEKALKLEPNDGGI 334 (361)
Q Consensus 307 a~~~l~~~~~A~~~~~~al~l~P~~~~~ 334 (361)
--...|+...|...+.+|+.+.|...+.
T Consensus 103 FEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 103 FELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 8888999999999999999999986544
No 264
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=96.59 E-value=0.0036 Score=57.77 Aligned_cols=73 Identities=8% Similarity=-0.100 Sum_probs=60.3
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+..+..+|..++..|++++|+..+++|+. +++. ..+|..+|.++...|++++|++.+.+|+
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~------------------Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~Al 337 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGID------------------LEMS-WLNYVLLGKVYEMKGMNREAADAYLTAF 337 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH------------------HCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHh------------------cCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 44455567777788999999999999999 6553 5677889999999999999999999999
Q ss_pred hcCCCchhhHhHH
Q 018098 292 RDGDDNVKALFRQ 304 (361)
Q Consensus 292 ~~~p~~~ka~~~~ 304 (361)
+++|... .|+..
T Consensus 338 rL~P~~~-t~~~~ 349 (372)
T 3ly7_A 338 NLRPGAN-TLYWI 349 (372)
T ss_dssp HHSCSHH-HHHHH
T ss_pred hcCCCcC-hHHHH
Confidence 9999774 44443
No 265
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.68 E-value=0.086 Score=42.71 Aligned_cols=73 Identities=11% Similarity=0.024 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHh--hcC---------------CCchhhHh-HHHHHHHhcCCHHHHHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAM--RDG---------------DDNVKALF-RQGQAYMALNDVDAAVESFEKA 324 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al--~~~---------------p~~~ka~~-~~a~a~~~l~~~~~A~~~~~~a 324 (361)
.++..+--+.||.++++|..|+...+..| +.+ |.+-+.++ -+|..+..+|+-++|+.+|.+.
T Consensus 61 T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~S 140 (242)
T 3kae_A 61 TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRS 140 (242)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhh
Confidence 34566778899999999999999999999 332 33334433 4699999999999999999999
Q ss_pred HHhCCCCHHHH
Q 018098 325 LKLEPNDGGIK 335 (361)
Q Consensus 325 l~l~P~~~~~~ 335 (361)
....|--+.+.
T Consensus 141 f~~~~lf~~vE 151 (242)
T 3kae_A 141 FGKSFLFSPVE 151 (242)
T ss_dssp HHHCCCHHHHH
T ss_pred cCCccccchHH
Confidence 99888655554
No 266
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=95.43 E-value=0.072 Score=49.68 Aligned_cols=99 Identities=16% Similarity=-0.011 Sum_probs=79.0
Q ss_pred HhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--
Q 018098 217 VFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG-- 294 (361)
Q Consensus 217 ~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~-- 294 (361)
.+|..++..|+|.+|++.+.+.++.+.... .......++..-..+|..++++.++...+++|....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~d------------d~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~a 171 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLD------------DKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANA 171 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSS------------CTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccc------------cchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhcc
Confidence 679999999999999999999998665420 134667788999999999999999999999887432
Q ss_pred --C-Cc--hhhHhHHHHHHH-hcCCHHHHHHHHHHHHHh
Q 018098 295 --D-DN--VKALFRQGQAYM-ALNDVDAAVESFEKALKL 327 (361)
Q Consensus 295 --p-~~--~ka~~~~a~a~~-~l~~~~~A~~~~~~al~l 327 (361)
+ .. ......-|.+++ ..++|..|..+|-.+++-
T Consensus 172 i~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 172 IYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 2 22 344455688899 899999999999998754
No 267
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.35 E-value=0.11 Score=50.21 Aligned_cols=134 Identities=10% Similarity=-0.058 Sum_probs=90.9
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccccc------CCCCccchhH----------------HHHHHHHHHHH
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEK------EGIDEGKSSS----------------LRKTKSQIFTN 269 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~------~~~~~~~~~~----------------~~~~~~~~~~n 269 (361)
...|...+..+...|+.+.|...|++|+.. +..... .....+.... .......+|..
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~ 291 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRIN 291 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHH
Confidence 455777777888899999999999999986 422100 0000000000 01223466777
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 270 SSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALN-DVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 270 la~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~-~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
.+....+.++.+.|...+.+| ...+.....|...|..-...+ +.+.|...|+++++..|+++..+.........+.+
T Consensus 292 y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~ 369 (493)
T 2uy1_A 292 HLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGD 369 (493)
T ss_dssp HHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCC
Confidence 888877888999999999999 443345566666666655555 69999999999999999988876666555444443
No 268
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.28 E-value=0.11 Score=50.13 Aligned_cols=83 Identities=8% Similarity=-0.100 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAK 342 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~ 342 (361)
...++..+|........+..|..+|.+|+.+.|.+..+|..+|.+....|+.-+|+-+|-+++......+.++.++..+-
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f 230 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHH
Confidence 34577888888888899999999999999999999999999999999999999999999999988777888888887776
Q ss_pred HHH
Q 018098 343 KKI 345 (361)
Q Consensus 343 ~~~ 345 (361)
...
T Consensus 231 ~~~ 233 (497)
T 1ya0_A 231 SKA 233 (497)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 269
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.14 E-value=0.043 Score=51.96 Aligned_cols=102 Identities=13% Similarity=-0.034 Sum_probs=79.5
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+..+|..+++.|++++|++.|.++..+... ......++.+...+++..++|..+..+..++-.
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~---------------~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~ 196 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAIS---------------TGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNS 196 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTC---------------CCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC---------------hHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 35678999999999999999999998875432 124567788888999999999999999999875
Q ss_pred cC---CCc---hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 018098 293 DG---DDN---VKALFRQGQAYMALNDVDAAVESFEKALKLEP 329 (361)
Q Consensus 293 ~~---p~~---~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 329 (361)
+- ++. .+.....|.++...++|.+|...|-.++.-..
T Consensus 197 ~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 197 MIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred hhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 42 221 24445567888899999999999988876543
No 270
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=95.14 E-value=0.15 Score=44.62 Aligned_cols=66 Identities=20% Similarity=0.073 Sum_probs=59.4
Q ss_pred HHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 018098 273 CKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKEL 338 (361)
Q Consensus 273 ~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l 338 (361)
-.++.++.++|+..+...++.+|.+++.-..+-+.++-.|+|+.|.+-++.+.+++|........+
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~y 71 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQL 71 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999999876554443
No 271
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.35 E-value=0.22 Score=47.90 Aligned_cols=112 Identities=7% Similarity=-0.075 Sum_probs=83.4
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-DLKGALLDTEFAM 291 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~-~~~~Al~~~~~al 291 (361)
..+...+....+.+..+.|...|.+| ... +....+|...|..-...+ +.+.|...++.++
T Consensus 287 ~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~------------------~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al 347 (493)
T 2uy1_A 287 LLRINHLNYVLKKRGLELFRKLFIEL-GNE------------------GVGPHVFIYCAFIEYYATGSRATPYNIFSSGL 347 (493)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHH-TTS------------------CCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh-hCC------------------CCChHHHHHHHHHHHHHCCChHHHHHHHHHHH
Confidence 45666666666788899999999999 410 011235555566555555 6999999999999
Q ss_pred hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Q 018098 292 RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 292 ~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~ 347 (361)
+..|+.+..+...+.....+|+.+.|...|+++ +....++..........++
T Consensus 348 ~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~----~k~~~lw~~~~~fE~~~G~ 399 (493)
T 2uy1_A 348 LKHPDSTLLKEEFFLFLLRIGDEENARALFKRL----EKTSRMWDSMIEYEFMVGS 399 (493)
T ss_dssp HHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS----CCBHHHHHHHHHHHHHHSC
T ss_pred HHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH----HHHHHHHHHHHHHHHHCCC
Confidence 998998887777777778899999999999997 3466777777777666544
No 272
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.13 E-value=0.05 Score=55.04 Aligned_cols=59 Identities=19% Similarity=0.259 Sum_probs=52.3
Q ss_pred HHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 214 SIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 214 ~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
-+...+..+.++|+|+.|+.+-++|+. +.|.....|..||.||.++|+|+.|+-..+-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~------------------~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTE------------------LALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHh------------------cCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 455567788899999999999999999 78888999999999999999999999776665
No 273
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.96 E-value=0.22 Score=43.61 Aligned_cols=62 Identities=10% Similarity=0.019 Sum_probs=55.5
Q ss_pred chhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchh
Q 018098 220 NEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVK 299 (361)
Q Consensus 220 ~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~k 299 (361)
..+++.|+.++|++.....++ .+|.+......+...++-.|+|+.|+..++.+.+++|....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR------------------~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIK------------------ASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHH------------------TCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHHhCCCHHHHHHHHHHHHH------------------hCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 356788999999999999999 77888888888889999999999999999999999998743
No 274
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=92.07 E-value=3.6 Score=38.14 Aligned_cols=148 Identities=13% Similarity=0.081 Sum_probs=95.0
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc---------------cccCCCCccch--------hHHHH-----
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC---------------WEKEGIDEGKS--------SSLRK----- 261 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~---------------~~~~~~~~~~~--------~~~~~----- 261 (361)
..-.+...+|..+.+.|++++-.+.......++... ...-+...+.. .....
T Consensus 17 ~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~~a~~~~r~f 96 (394)
T 3txn_A 17 IKEQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQEKRTF 96 (394)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678899999999999999988876555444311 11111111110 00001
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc----CCC--chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC---CCCH
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRD----GDD--NVKALFRQGQAYMALNDVDAAVESFEKALKLE---PNDG 332 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~----~p~--~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~---P~~~ 332 (361)
....+-..+|..|+..|+|.+|+..+.+.++- |.. -...+....+.|..++++..+.+.|.+|.... +.++
T Consensus 97 lr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p 176 (394)
T 3txn_A 97 LRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPP 176 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCH
Confidence 11123458899999999999999998888853 221 15677778899999999999999999997664 3456
Q ss_pred HHHHHHHHHHHHHH-----HHHHHHHHHHh
Q 018098 333 GIKKELAVAKKKIH-----ERREQEKKQYR 357 (361)
Q Consensus 333 ~~~~~l~~~~~~~~-----~~~~~~k~~~~ 357 (361)
.+...+..+...+. +++.+...+|.
T Consensus 177 ~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~e 206 (394)
T 3txn_A 177 KVQGALDLQSGILHAADERDFKTAFSYFYE 206 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHhccCHHHHHHHHHH
Confidence 55555555544443 34555555544
No 275
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=91.69 E-value=0.76 Score=37.55 Aligned_cols=29 Identities=10% Similarity=0.014 Sum_probs=21.0
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALR 240 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~ 240 (361)
...|+.+|......|+++-|.++|.++-.
T Consensus 34 ~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D 62 (177)
T 3mkq_B 34 SITWERLIQEALAQGNASLAEMIYQTQHS 62 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhCC
Confidence 44677777777777777777777777654
No 276
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=91.31 E-value=0.73 Score=32.56 Aligned_cols=39 Identities=15% Similarity=0.176 Sum_probs=33.9
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccc
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW 246 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~ 246 (361)
.+..|..+...|...-+.|+|++|+.+|.+|++++....
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~l 45 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQII 45 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 556788899999999999999999999999999876543
No 277
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=91.11 E-value=1.5 Score=42.25 Aligned_cols=107 Identities=10% Similarity=0.036 Sum_probs=71.1
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc--CCCchhhHh
Q 018098 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD--GDDNVKALF 302 (361)
Q Consensus 225 ~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~--~p~~~ka~~ 302 (361)
.+.++.|.+.|.+.... .+.| +...|+.+-.+|.+.|++++|+..+++..+. .| +...|.
T Consensus 83 ~~~l~~A~~lf~~M~~~----------------G~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn 144 (501)
T 4g26_A 83 NPGLSRGFDIFKQMIVD----------------KVVP-NEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYG 144 (501)
T ss_dssp CHHHHHHHHHHHHHHHT----------------TCCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHH
T ss_pred cchHHHHHHHHHHHHHh----------------CCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceeh
Confidence 35667777777775540 0122 3345777778888889999998888887754 34 566777
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHH
Q 018098 303 RQGQAYMALNDVDAAVESFEKALKL--EPNDGGIKKELAVAKKKIHERRE 350 (361)
Q Consensus 303 ~~a~a~~~l~~~~~A~~~~~~al~l--~P~~~~~~~~l~~~~~~~~~~~~ 350 (361)
.+-.+|...|+.++|.+.|++..+. .| |...+..+-.+..+.++.++
T Consensus 145 ~lI~~~~~~g~~~~A~~l~~~M~~~G~~P-d~~ty~~Li~~~~~~g~~d~ 193 (501)
T 4g26_A 145 PALFGFCRKGDADKAYEVDAHMVESEVVP-EEPELAALLKVSMDTKNADK 193 (501)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHhhCCCHHH
Confidence 7777888888999998888887664 34 44455555555555444433
No 278
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=91.09 E-value=2.2 Score=39.50 Aligned_cols=87 Identities=15% Similarity=0.060 Sum_probs=66.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCC----------c------------hhhHhHHHHHHHhcCCHHHHHHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDD----------N------------VKALFRQGQAYMALNDVDAAVESFEK 323 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p~----------~------------~ka~~~~a~a~~~l~~~~~A~~~~~~ 323 (361)
.+...|......++.+.|+..+.+|+.+..- + ..+...++.++..+|++++|+..+.+
T Consensus 117 ~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~ 196 (388)
T 2ff4_A 117 AEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEA 196 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3444444455678999999999999976421 1 23555677888999999999999999
Q ss_pred HHHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 324 ALKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 324 al~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
++..+|-+..++..+..+..+..+..++.
T Consensus 197 ~~~~~P~~E~~~~~lm~al~~~Gr~~~Al 225 (388)
T 2ff4_A 197 LTFEHPYREPLWTQLITAYYLSDRQSDAL 225 (388)
T ss_dssp HHHHSTTCHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHH
Confidence 99999999999999988877766555444
No 279
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=90.63 E-value=1.3 Score=42.66 Aligned_cols=101 Identities=11% Similarity=0.069 Sum_probs=78.6
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+..+-..+.+.|++++|++.|++..+.= +.| +...|+.+-..|.+.|++++|...+++..+
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g----------------~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKAFG----------------IQP-RLRSYGPALFGFCRKGDADKAYEVDAHMVE 168 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTT----------------CCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcC----------------CCC-ccceehHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 445566677889999999999999876510 122 344677788888999999999999999886
Q ss_pred c--CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh--CCCC
Q 018098 293 D--GDDNVKALFRQGQAYMALNDVDAAVESFEKALKL--EPND 331 (361)
Q Consensus 293 ~--~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--~P~~ 331 (361)
. .| +...|..+-.++...|+.++|.+.|++..+. .|+.
T Consensus 169 ~G~~P-d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~ 210 (501)
T 4g26_A 169 SEVVP-EEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 210 (501)
T ss_dssp TTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCH
T ss_pred cCCCC-CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCH
Confidence 5 34 5677888888999999999999999987664 4543
No 280
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=90.04 E-value=0.84 Score=34.59 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=33.7
Q ss_pred HHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccc
Q 018098 207 WWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW 246 (361)
Q Consensus 207 ~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~ 246 (361)
..+..|..+...|...-..++|++|+.+|..|++++..+.
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 3456788888888888899999999999999999876553
No 281
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=90.01 E-value=0.99 Score=31.87 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=35.8
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccc
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW 246 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~ 246 (361)
....+..|..+...|...-+.|+|++|+.+|.+|++++....
T Consensus 12 ~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~al 53 (83)
T 2w2u_A 12 QVMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLV 53 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 345667888999999999999999999999999999876543
No 282
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=89.93 E-value=0.59 Score=44.95 Aligned_cols=82 Identities=13% Similarity=0.028 Sum_probs=70.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.-..+..+|.....+..+..|..+|.+|+. +.|.....|+-||.+....++.-+|+-+|.++
T Consensus 151 ~hr~l~~LGDL~RY~~~~~~A~~~Y~~A~~------------------~~P~~G~~~nqLavla~~~~~~l~a~y~y~rs 212 (497)
T 1ya0_A 151 CQHCLVHLGDIARYRNQTSQAESYYRHAAQ------------------LVPSNGQPYNQLAILASSKGDHLTTIFYYCRS 212 (497)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH------------------HCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHHH------------------hCCCCCchHHHHHHHHhcccccHHHHHHHHHH
Confidence 445667889999889999999999999999 88889999999999999999999999999999
Q ss_pred hhcCCCchhhHhHHHHHHHh
Q 018098 291 MRDGDDNVKALFRQGQAYMA 310 (361)
Q Consensus 291 l~~~p~~~ka~~~~a~a~~~ 310 (361)
|......+.|.-++...+..
T Consensus 213 l~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 213 IAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HSSSBCCHHHHHHHHHHHHH
T ss_pred HhcCCCChhHHHHHHHHHHH
Confidence 98766677777777666653
No 283
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.54 E-value=1.1 Score=45.24 Aligned_cols=26 Identities=15% Similarity=-0.013 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 265 QIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 265 ~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
..|.++|..+++.++++.|+..|.++
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 46677777777777777777776664
No 284
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=89.13 E-value=0.94 Score=35.96 Aligned_cols=93 Identities=10% Similarity=-0.034 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCh------HHHHHHHHHHhhcCCCc--------hhhHhHHHHHHHhcCCHHHHHHHHHHH
Q 018098 259 LRKTKSQIFTNSSACKLKLGDL------KGALLDTEFAMRDGDDN--------VKALFRQGQAYMALNDVDAAVESFEKA 324 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~------~~Al~~~~~al~~~p~~--------~ka~~~~a~a~~~l~~~~~A~~~~~~a 324 (361)
+.|.+...|.+......+.|+. ++.++.|++|+..-|-. +..|.+.|. +..+++.++|.+.|+.+
T Consensus 8 ~~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 8 MMANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMA 86 (161)
T ss_dssp --CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHH
Confidence 4556666777777777777888 88899999999765543 345555554 46779999999999999
Q ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 018098 325 LKLEPNDGGIKKELAVAKKKIHERREQE 352 (361)
Q Consensus 325 l~l~P~~~~~~~~l~~~~~~~~~~~~~~ 352 (361)
+.++..-.-++...++.+-+.....++.
T Consensus 87 ~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 87 RANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 9997777777877777766655554443
No 285
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=88.58 E-value=7.2 Score=34.85 Aligned_cols=113 Identities=12% Similarity=0.094 Sum_probs=67.9
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhc--CCh-----HHHHHHH
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKL--GDL-----KGALLDT 287 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l--~~~-----~~Al~~~ 287 (361)
....|..++..|+|.+|+..|+..|..+.-+.-. ++++..+.......+...+-.+-+++ ++. +.....+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~---~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~l 181 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVD---NKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRIC 181 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCC---SHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeec---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHH
Confidence 4678999999999999999999999866543221 22233334333333333222222333 221 2322223
Q ss_pred HHHh-----hcCCCchhhHhHHHH-HHHhcCCHHHHHHHHHHHHHhCCC
Q 018098 288 EFAM-----RDGDDNVKALFRQGQ-AYMALNDVDAAVESFEKALKLEPN 330 (361)
Q Consensus 288 ~~al-----~~~p~~~ka~~~~a~-a~~~l~~~~~A~~~~~~al~l~P~ 330 (361)
+-|. ++.|..--.-.|.|. ..+..++|..|...-++.+++.|.
T Consensus 182 ELAAYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 182 EMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 3222 445544333344444 467789999999999999999986
No 286
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.35 E-value=4.9 Score=37.87 Aligned_cols=105 Identities=7% Similarity=-0.063 Sum_probs=77.8
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFA 290 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~a 290 (361)
.+.....++..+...|+|.+|.........-.... .-......++..-...|+..++|..|.....++
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~------------~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki 203 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGS------------MEMSEKIQFILEQMELSILKGDYSQATVLSRKI 203 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS------------SCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc------------ccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 35566778999999999999999988876421110 013355677788888999999999999999887
Q ss_pred h----hcCC-Cc--hhhHhHHHHHHHhcCCHHHHHHHHHHHHHh
Q 018098 291 M----RDGD-DN--VKALFRQGQAYMALNDVDAAVESFEKALKL 327 (361)
Q Consensus 291 l----~~~p-~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 327 (361)
. ...+ .. ...+...|..+...++|.+|..+|..+++.
T Consensus 204 ~~~~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 204 LKKTFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHhhcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 4 2222 22 345556688889999999999999988764
No 287
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=87.93 E-value=1 Score=36.45 Aligned_cols=117 Identities=15% Similarity=0.183 Sum_probs=68.8
Q ss_pred EEEEEEeCCeeee-EEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEE--eCCCCCCCCCC
Q 018098 6 CFLDISIGVELEG-RIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQ--GGDISAGDGTG 82 (361)
Q Consensus 6 v~~~~~~~~~~~G-~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq--~G~~~~~~~~~ 82 (361)
-|+.|++.. .| +++.+|..+.||+||+.|+++- =|.+..+|-..-|--|. -|++..
T Consensus 22 r~i~itl~~--~g~~~~A~Lldd~APkTcaA~~~~L--------------P~~~~viHarwSGeeVy~~lp~f~~----- 80 (188)
T 3kop_A 22 RYINITLEK--RGVTCKALLLDDVAPRTSKAVWDAL--------------PQSSQVFHGKYARNEIYNLVPAFAP----- 80 (188)
T ss_dssp CEEEEEETT--TTEEEEEEECTTTSHHHHHHHHHHC--------------CEEEECEECSSSSSEEEEEEECCSS-----
T ss_pred eEEEEEEec--CCeEEEEEEccccChHHHHHHHHhC--------------CCCcceEEEEEecceEEEECCcccc-----
Confidence 467777632 23 4789999999999999999964 26777777777664333 333220
Q ss_pred CCccCCCCCCCCccccCCCCceEEEee---c---C----C--C------CCCCcceEEecCCCC--------CCCCCceE
Q 018098 83 GESIYGLKFEDENFELKHERKGMLSMA---N---A----G--P------NTNGSQFFITTTRTS--------HLDGKHVV 136 (361)
Q Consensus 83 ~~~~~~~~~~~e~~~~~~~~~g~l~~~---~---~----~--~------~~~~sqF~I~~~~~~--------~ld~~~~v 136 (361)
...+.||.. .+..+|-|.+- . . | + .+....+.|..+.+- ++.| .+
T Consensus 81 ------~~~g~EN~T-~~P~pGDIl~f~f~p~~lG~~~yGy~~~~~~~~~~~~~dl~ifYG~~~~l~~~~~GwlpG--N~ 151 (188)
T 3kop_A 81 ------KEPGAENTT-VTPIPGDVCYFTFTSNDLKTPSHGYEADSGTDEVQTIVDLAVFYGRNNLLLNGDTGWVPG--NV 151 (188)
T ss_dssp ------SCCCSCSEE-SSCCTTEEEEEEEEHHHHSSGGGCC--------CCEEEEEEEECSSSCCCEETTTEECCE--EE
T ss_pred ------cCCCcCCCC-CCCCCCcEEEEecCCcccCCccccccccccccCCCcceEEEEEecccccccccccceecC--cE
Confidence 112344443 23456766653 1 1 1 0 111235555554432 4444 58
Q ss_pred EeEEEeChHHHHHHhc
Q 018098 137 FGRVIKGMGVVRSIEH 152 (361)
Q Consensus 137 fG~V~~g~~vl~~i~~ 152 (361)
|++|++|+|-+.++-+
T Consensus 152 F~TIveGle~la~~c~ 167 (188)
T 3kop_A 152 FATIVEGLDEMAAACQ 167 (188)
T ss_dssp EEEEEESHHHHHHHHH
T ss_pred EEEEecCHHHHHHHHH
Confidence 9999999987766543
No 288
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=87.83 E-value=7.3 Score=34.85 Aligned_cols=117 Identities=10% Similarity=-0.003 Sum_probs=67.5
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcC-------ChHHHHH--
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLG-------DLKGALL-- 285 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~-------~~~~Al~-- 285 (361)
....|..++..|+|.+|+..|+..|-.+.-+.-. ++++..+.......+...+-.+-+++. +....++
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~---~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELA 193 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVD---DAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELA 193 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBC---SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeec---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHH
Confidence 4568999999999999999999999866543222 222222333333333222222222221 1111111
Q ss_pred HHHHHhhcCCCchhhHhHHHH-HHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 018098 286 DTEFAMRDGDDNVKALFRQGQ-AYMALNDVDAAVESFEKALKLEPNDGGI 334 (361)
Q Consensus 286 ~~~~al~~~p~~~ka~~~~a~-a~~~l~~~~~A~~~~~~al~l~P~~~~~ 334 (361)
.|=.-.++.|..--.-.|.|. ..+..++|..|....++.+++.|..+.+
T Consensus 194 AYFT~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~~a 243 (325)
T 3mv2_A 194 AYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRA 243 (325)
T ss_dssp HHGGGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSHHH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHHHH
Confidence 111122445444333344444 4677899999999999999999965433
No 289
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=86.52 E-value=1.7 Score=43.79 Aligned_cols=17 Identities=29% Similarity=0.405 Sum_probs=9.8
Q ss_pred HHHhcCCHHHHHHHHHH
Q 018098 307 AYMALNDVDAAVESFEK 323 (361)
Q Consensus 307 a~~~l~~~~~A~~~~~~ 323 (361)
++..+|++++|++.|.+
T Consensus 745 ~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 745 AYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHTCHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHH
Confidence 44556666666666544
No 290
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=85.70 E-value=1.8 Score=31.20 Aligned_cols=39 Identities=18% Similarity=0.081 Sum_probs=33.2
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccc
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW 246 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~ 246 (361)
.+..|..+...|...-+.|+|++|+.+|..|++++....
T Consensus 11 ~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~al 49 (93)
T 1wfd_A 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVL 49 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 445788888899999999999999999999999876543
No 291
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.05 E-value=2.1 Score=41.06 Aligned_cols=71 Identities=15% Similarity=0.067 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCC--C---chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCH
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGD--D---NVKALFRQGQAYMALNDVDAAVESFEKALKLEPNDG 332 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p--~---~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~ 332 (361)
....+++-+-..|+..+.|+.|.....++.-... . .+..+|..|.++...++|.+|.++|..|++..|.+.
T Consensus 229 ~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 229 TKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp HHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred hhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 4456777888899999999999999999963322 1 167788899999999999999999999999888653
No 292
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.24 E-value=4.3 Score=43.21 Aligned_cols=105 Identities=12% Similarity=-0.022 Sum_probs=73.1
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHH---------HHHHHHHHHHHHHHhcCChHHHHH
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRK---------TKSQIFTNSSACKLKLGDLKGALL 285 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~nla~~~~~l~~~~~Al~ 285 (361)
.+-+|..++..|++++|..+|.+|..-+.. ..... .......+ .....|......+.+.+.++.+++
T Consensus 845 ~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~---~~~l~-~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~ 920 (1139)
T 4fhn_B 845 VYLKALIYLKSKEAVKAVRCFKTTSLVLYS---HTSQF-AVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALE 920 (1139)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCSCTT---CCCSC-SSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhhhcc---cchhh-hhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHH
Confidence 467899999999999999999998542211 11000 00001111 122457777888888899999999
Q ss_pred HHHHHhhcCCCch-----hhHhHHHHHHHhcCCHHHHHHHHHH
Q 018098 286 DTEFAMRDGDDNV-----KALFRQGQAYMALNDVDAAVESFEK 323 (361)
Q Consensus 286 ~~~~al~~~p~~~-----ka~~~~a~a~~~l~~~~~A~~~~~~ 323 (361)
.+..||...+.+. ..|.++-.++..+++|++|...+..
T Consensus 921 fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~ 963 (1139)
T 4fhn_B 921 FSLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMV 963 (1139)
T ss_dssp HHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHH
T ss_pred HHHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHh
Confidence 9999997654332 2678888999999999999876643
No 293
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=83.20 E-value=3.8 Score=38.68 Aligned_cols=31 Identities=13% Similarity=0.049 Sum_probs=13.1
Q ss_pred hHHHHHHHHHHhhc-CCCchhhHhHHHHHHHh
Q 018098 280 LKGALLDTEFAMRD-GDDNVKALFRQGQAYMA 310 (361)
Q Consensus 280 ~~~Al~~~~~al~~-~p~~~ka~~~~a~a~~~ 310 (361)
|++|+.+++++-.. ++...+-+...+.-|..
T Consensus 455 Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~ 486 (526)
T 2wb7_A 455 YKAAINDLQKAAQQDDYQMFLNYLNAAKKHEM 486 (526)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCHHHHHHHHHHhhhhhh
Confidence 45555555555422 22333444444433333
No 294
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=82.68 E-value=11 Score=30.56 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=41.8
Q ss_pred HHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHH
Q 018098 273 CKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKAL 325 (361)
Q Consensus 273 ~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 325 (361)
..+++|+++.|.+.+... ++...|.++|.+....|+++-|..+|.++-
T Consensus 14 LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 14 LALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 346899999999998765 578899999999999999999999998864
No 295
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=82.39 E-value=1.2 Score=31.83 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=30.0
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcc
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDI 244 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~ 244 (361)
..|-.+-.++..+.+.|+|++||++..+|..++..
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 35777788899999999999999999999986643
No 296
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.30 E-value=1.8 Score=40.72 Aligned_cols=76 Identities=12% Similarity=0.068 Sum_probs=59.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCC---CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGD---DNVKALFRQGQAYMALNDVDAAVESFEKALKLEP--NDGGIKKELAV 340 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p---~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P--~~~~~~~~l~~ 340 (361)
++..+|..|.+.|++++|++.+.++..... .-...++..-.++...++|..+...++++..+-. .++..+..+..
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 567899999999999999999999886533 3467888888899999999999999999976632 34544444433
Q ss_pred H
Q 018098 341 A 341 (361)
Q Consensus 341 ~ 341 (361)
.
T Consensus 213 ~ 213 (429)
T 4b4t_R 213 Y 213 (429)
T ss_dssp H
T ss_pred H
Confidence 3
No 297
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=81.40 E-value=1.6 Score=30.78 Aligned_cols=38 Identities=16% Similarity=0.213 Sum_probs=31.9
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~ 245 (361)
.+..|..+...|...-..|+|++|+.+|..|++++...
T Consensus 9 ~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 9 FLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 44567788888888889999999999999999977554
No 298
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=80.86 E-value=2.2 Score=30.22 Aligned_cols=35 Identities=20% Similarity=0.170 Sum_probs=29.6
Q ss_pred hhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc
Q 018098 211 AVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (361)
Q Consensus 211 ~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~ 245 (361)
.|..+...|..+-+.|+|++|+.+|..|++++...
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~a 49 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 49 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 46677778888889999999999999999977644
No 299
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=80.45 E-value=15 Score=34.55 Aligned_cols=87 Identities=16% Similarity=0.064 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhh----cCCCc--hhhHhHHHHHHHhcCCHHHHHHHHHHHHH---hCCCCHH
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMR----DGDDN--VKALFRQGQAYMALNDVDAAVESFEKALK---LEPNDGG 333 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~----~~p~~--~ka~~~~a~a~~~l~~~~~A~~~~~~al~---l~P~~~~ 333 (361)
.+.+...||..|...|+|.+|......... .++.. ...+......+...+++..|...++++.. -.+..+.
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 456678899999999999999998888762 22222 55777778899999999999999998742 3455565
Q ss_pred HHHHHHHHHHHHHHHH
Q 018098 334 IKKELAVAKKKIHERR 349 (361)
Q Consensus 334 ~~~~l~~~~~~~~~~~ 349 (361)
....+-.+..++...+
T Consensus 216 lk~~~~~~~~~~~~~e 231 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHK 231 (445)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5555555544444433
No 300
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.59 E-value=7.6 Score=29.04 Aligned_cols=79 Identities=10% Similarity=-0.047 Sum_probs=58.9
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccC----CCCccchhHHHHHHHHHHHHHHHHHHhcCCh
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKE----GIDEGKSSSLRKTKSQIFTNSSACKLKLGDL 280 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~ 280 (361)
+....+.|-.+.+.|...=..|+-+.|+.+|++.+..+.....-+ ....+.|.........+..||..+..+++..
T Consensus 15 ik~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~L 94 (116)
T 2dl1_A 15 IREAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEIL 94 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666788888888888889999999999999999887532221 2445666667777778888888888777655
Q ss_pred HHH
Q 018098 281 KGA 283 (361)
Q Consensus 281 ~~A 283 (361)
+..
T Consensus 95 e~~ 97 (116)
T 2dl1_A 95 EKG 97 (116)
T ss_dssp HHH
T ss_pred Hhc
Confidence 554
No 301
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=77.30 E-value=4.7 Score=39.82 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=46.0
Q ss_pred HHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHH
Q 018098 273 CKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALK 326 (361)
Q Consensus 273 ~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 326 (361)
..++.++++.|..++...-.-.....++.|.+|.++..+|+.++|...|+++.+
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 345679999999999877665456688999999999999999999999998875
No 302
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=76.54 E-value=45 Score=30.32 Aligned_cols=121 Identities=15% Similarity=0.031 Sum_probs=71.1
Q ss_pred hHHHHhhhHHHHHhcchhHHhh---------hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHH
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQ---------DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKL 275 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g---------~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~ 275 (361)
..-..+.+..++++|..+.+.+ ..+.|..+|++|.-+..++...-.. ....++++....++..++.+..
T Consensus 110 ~sl~fE~a~VLfNiaal~s~~a~~~~r~~~~glK~A~~~fq~AAG~f~~l~~~~~~--~~~~Dls~~~l~~L~~l~LAQA 187 (363)
T 3rau_A 110 EDIKYEQACILYNLGALHSMLGAMDKRVSEEGMKVSCTHFQCAAGAFAYLREHFPQ--AYSVDMSRQILTLNVNLMLGQA 187 (363)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHHCCS--CSSGGGSHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCcCCHHHHHHHHHHHHHHH
Confidence 3345567888888888886543 4788999999998887765443211 1112355555666665555433
Q ss_pred hcCChHH-----------------HHHHHHHHhhc---CC----------C------------chhhHhHHHHHHHhcCC
Q 018098 276 KLGDLKG-----------------ALLDTEFAMRD---GD----------D------------NVKALFRQGQAYMALND 313 (361)
Q Consensus 276 ~l~~~~~-----------------Al~~~~~al~~---~p----------~------------~~ka~~~~a~a~~~l~~ 313 (361)
+.--+.+ +..+|++|... .+ . .+.|+|+.|......++
T Consensus 188 QE~~~~Kai~~~~k~~liAkLa~q~~~~Y~~a~~~l~~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k 267 (363)
T 3rau_A 188 QECLLEKSMLDNRKSFLVARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQAEEQQK 267 (363)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhcCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhh
Confidence 2222222 22344444321 11 1 13467777777778888
Q ss_pred HHHHHHHHHHHHHh
Q 018098 314 VDAAVESFEKALKL 327 (361)
Q Consensus 314 ~~~A~~~~~~al~l 327 (361)
+-+|+..++.|.+.
T Consensus 268 ~GeaIa~L~~A~~~ 281 (363)
T 3rau_A 268 FGERVAYFQSALDK 281 (363)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 98888877766553
No 303
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=75.27 E-value=14 Score=33.99 Aligned_cols=122 Identities=13% Similarity=0.020 Sum_probs=71.7
Q ss_pred HHHHhhhHHHHHhcchhHHhh------------hHHHHHHHHHHHHhhhcccccc--CCC--CccchhHHHHHHHHHHHH
Q 018098 206 SWWMNAVDSIKVFGNEHYKKQ------------DYKMALRKYRKALRYLDICWEK--EGI--DEGKSSSLRKTKSQIFTN 269 (361)
Q Consensus 206 ~~~~~~a~~~~~~G~~~~~~g------------~y~~A~~~y~~al~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~n 269 (361)
.-..+.+..++++|..+.+.+ ..+.|..+|++|.-+..++... ... ..+...++++....++..
T Consensus 108 sl~fE~a~VLfNiaal~sq~A~~~~~~~r~~~e~lK~A~~~fq~AAG~f~~l~~~~~~~~~~~~~~~~Dls~~~l~~L~~ 187 (376)
T 3r9m_A 108 DAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHLPKLITPAEKGRDLESRLIEAYVI 187 (376)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCSSCCCTTSTTSHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCcccCHHHHHHHHH
Confidence 344556788888887765432 3688999999998887765432 110 111122355555666655
Q ss_pred HHHHHHhcCChH-----------------HHHHHHHHHhhc-CC-------Cc------------hhhHhHHHHHHHhcC
Q 018098 270 SSACKLKLGDLK-----------------GALLDTEFAMRD-GD-------DN------------VKALFRQGQAYMALN 312 (361)
Q Consensus 270 la~~~~~l~~~~-----------------~Al~~~~~al~~-~p-------~~------------~ka~~~~a~a~~~l~ 312 (361)
++.+..+.--+. ++..+|++|... .. .+ +.|+|+.|..+...+
T Consensus 188 l~LAQAQE~~~~Kai~~~~k~~liAKLa~q~~~~Y~~a~~~l~~~~~~i~~~W~~~v~~K~~~~~A~A~y~~a~~~~~~~ 267 (376)
T 3r9m_A 188 QCQAEAQEVTIARAIELKHAPGLIAALAYETANFYQKADHTLSSLEPAYSAKWRKYLHLKMCFYTAYAYCYHGETLLASD 267 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 554433221121 223355555432 11 11 557788888888889
Q ss_pred CHHHHHHHHHHHHHh
Q 018098 313 DVDAAVESFEKALKL 327 (361)
Q Consensus 313 ~~~~A~~~~~~al~l 327 (361)
++-+|+..|+.|.+.
T Consensus 268 k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 268 KCGEAIRSLQEAEKL 282 (376)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 999999988887664
No 304
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=74.76 E-value=4.2 Score=29.00 Aligned_cols=22 Identities=14% Similarity=0.049 Sum_probs=10.4
Q ss_pred HHHHHHHHHHhcCChHHHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDT 287 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~ 287 (361)
.+..+|..+++.|+|++||++.
T Consensus 17 ~~~RrAe~ll~~gkydeAIech 38 (97)
T 2crb_A 17 QQSRRADRLLAAGKYEEAISCH 38 (97)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HhhhHHHHHHhcCCHHHHHHHH
Confidence 3444444444555555544443
No 305
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=72.18 E-value=20 Score=28.00 Aligned_cols=61 Identities=15% Similarity=0.027 Sum_probs=42.7
Q ss_pred HHHHHHHH-hcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 268 TNSSACKL-KLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 268 ~nla~~~~-~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
.++|.-++ ..|+-++--+.+...+.-.+-++..++.+|.||..+|+..+|.+.+.+|.+--
T Consensus 94 vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 94 VNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 44444433 34444444444555556666779999999999999999999999999997753
No 306
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=71.20 E-value=2.3 Score=33.80 Aligned_cols=105 Identities=21% Similarity=0.208 Sum_probs=63.0
Q ss_pred EEEEeCCeeeeEEEEEEcCCCCCcchHhHHhhhccCCCCCCCCCCCceeeeeEEEEeecCcEEEeCCCCCCCCCCCCccC
Q 018098 8 LDISIGVELEGRIIVEIYNDVIPKTAENFRALCTGEKGIGPNTGVPLHYKVIRFHRVIKGFMIQGGDISAGDGTGGESIY 87 (361)
Q Consensus 8 ~~~~~~~~~~G~i~ieL~~~~~P~~~~nf~~l~~~~~~~~~~~~~~~~y~~~~~~rv~~~~~iq~G~~~~~~~~~~~~~~ 87 (361)
+.++++| ..++++|+++.||.||+.|+++-= +.... .+- +.-+-+ ++....
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LP--------------l~~~~-~~~--g~E~y~-~lp~~l-------- 82 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADALP--------------IKSTA-NRW--GDEIYF-TTQVAV-------- 82 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTCS--------------EEEEE-EEE--TTEEEE-CCSCCC--------
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhCC--------------cEEEH-Hhh--CCcEEE-ECCCCC--------
Confidence 5566766 679999999999999999999752 34332 221 112221 111000
Q ss_pred CCCCCCCccccCCCCceEEEeecCCCCCCCcceEEecCCCCCCC------CCceEEeEEEeChHHHHHH
Q 018098 88 GLKFEDENFELKHERKGMLSMANAGPNTNGSQFFITTTRTSHLD------GKHVVFGRVIKGMGVVRSI 150 (361)
Q Consensus 88 ~~~~~~e~~~~~~~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld------~~~~vfG~V~~g~~vl~~i 150 (361)
... |+. .....+|-|++.-.+ ..+.|..++.|... ..-.+||+|.+|++.+..+
T Consensus 83 --~~~-en~-~~~~~~GDI~Yy~pg-----~~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~ 142 (153)
T 2nnz_A 83 --EKE-ENS-KDVVELGDVAYWIPG-----KAICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGV 142 (153)
T ss_dssp --CCS-SCC-BCCCCTTEEEEETTT-----TEEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGC
T ss_pred --CCC-CCC-cccCCCCeEEEeCCC-----CEEEEEECCccccccccccccccEEEEEEccCHHHHhhC
Confidence 011 221 233467888887543 34888888775322 2357899999998766554
No 307
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=67.64 E-value=48 Score=26.88 Aligned_cols=55 Identities=18% Similarity=0.176 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKAL 325 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 325 (361)
.-..++.+..-.|+|..|+-... .-+.+.+.|..+.||..+++|..|+.++++.+
T Consensus 35 Y~lL~~I~LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 35 YRMLMSIVLYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455667777899988875543 23467888999999999999999999999999
No 308
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.49 E-value=9.3 Score=28.57 Aligned_cols=62 Identities=16% Similarity=0.151 Sum_probs=29.2
Q ss_pred hHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCC----CHHHHHHHHHHHHHHHHHH
Q 018098 280 LKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEPN----DGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 280 ~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~----~~~~~~~l~~~~~~~~~~~ 349 (361)
|++|-.+..+||.+|.. |.--..+.-|.+++..|++++.+..+ ....|.....++.+++...
T Consensus 19 h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL 84 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETL 84 (116)
T ss_dssp HHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHH
Confidence 45555566666665541 22222333344455555566665542 2344444444444444433
No 309
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=67.16 E-value=40 Score=35.39 Aligned_cols=100 Identities=6% Similarity=-0.069 Sum_probs=73.8
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
..+..+=+.+.+.|+.++|.+.+.+..+.... ... -+...|+-+-..|.+.|++++|++.+.+-.+
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~k-------------G~~-PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~ 193 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQK-------------RKL-LTLDMYNAVMLGWARQGAFKELVYVLFMVKD 193 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHH-------------HTT-CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhc-------------CCC-CCHhHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 34667777889999999999999765431100 011 2456788888899999999999999998876
Q ss_pred c--CCCchhhHhHHHHHHHhcCC-HHHHHHHHHHHHHh
Q 018098 293 D--GDDNVKALFRQGQAYMALND-VDAAVESFEKALKL 327 (361)
Q Consensus 293 ~--~p~~~ka~~~~a~a~~~l~~-~~~A~~~~~~al~l 327 (361)
. .| +.-.|.-+=.++...|+ .++|...|++..+.
T Consensus 194 ~G~~P-DvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 194 AGLTP-DLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp TTCCC-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred cCCCC-cHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 4 45 55666666667888887 47888888887664
No 310
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=66.07 E-value=13 Score=35.07 Aligned_cols=104 Identities=8% Similarity=0.039 Sum_probs=65.3
Q ss_pred hhhHHHHHHHHHHHHhhhccccccCCCCccch-hHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC--------C
Q 018098 225 KQDYKMALRKYRKALRYLDICWEKEGIDEGKS-SSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDG--------D 295 (361)
Q Consensus 225 ~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~--------p 295 (361)
....++|.....++...+. .+.....++. ..-.....-+.+++..+|+++++...|.......-... |
T Consensus 139 ~~~le~~a~~i~k~F~~cl---~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p 215 (455)
T 3t5v_B 139 HQFLSHISSILSRLFNSIK---PPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQ 215 (455)
T ss_dssp THHHHHHHHHHHHHHHHCC---CC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSC
T ss_pred hhHHHHHHHHHHHHHHHhc---ccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCC
Confidence 3455566666666655432 1111111111 11222333445777899999999988877664332211 2
Q ss_pred --CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh-CCCC
Q 018098 296 --DNVKALFRQGQAYMALNDVDAAVESFEKALKL-EPND 331 (361)
Q Consensus 296 --~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l-~P~~ 331 (361)
..+..+|.+|..+...++|.+|.+.+..|++. .|.+
T Consensus 216 ~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 216 LDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 12678899999999999999999999999998 7754
No 311
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=65.45 E-value=22 Score=32.56 Aligned_cols=121 Identities=9% Similarity=-0.047 Sum_probs=68.7
Q ss_pred HHHhhhHHHHHhcchhHHhh---------hHHHHHHHHHHHHhhhccccccC--CCCccchhHHHHHHHHHHHHHHHHHH
Q 018098 207 WWMNAVDSIKVFGNEHYKKQ---------DYKMALRKYRKALRYLDICWEKE--GIDEGKSSSLRKTKSQIFTNSSACKL 275 (361)
Q Consensus 207 ~~~~~a~~~~~~G~~~~~~g---------~y~~A~~~y~~al~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~nla~~~~ 275 (361)
-..+.+..++++|-.+...+ ..+.|..+|++|.-+..++...- ........++++....++.+++.+..
T Consensus 137 l~fE~a~VLfNlgal~s~~A~~~~r~~~eglK~A~~~fq~AAG~f~~l~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQA 216 (380)
T 3c3r_A 137 LGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTVGTLSLIMLAQA 216 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCTTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCccCCHHHHHHHHHHHHHHH
Confidence 44556778888887765432 26889999999988777653321 00011112255556666665554432
Q ss_pred hcCChHH-----------------HHHHHHHHhh-------cCCCc------------hhhHhHHHHHHHhcCCHHHHHH
Q 018098 276 KLGDLKG-----------------ALLDTEFAMR-------DGDDN------------VKALFRQGQAYMALNDVDAAVE 319 (361)
Q Consensus 276 ~l~~~~~-----------------Al~~~~~al~-------~~p~~------------~ka~~~~a~a~~~l~~~~~A~~ 319 (361)
+.--+.+ +..+|+.|++ +++.+ +.|+|+.|......+++-+|+.
T Consensus 217 QE~~~~Kai~~~~k~~liAkLa~~~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa 296 (380)
T 3c3r_A 217 QEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIA 296 (380)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 2211222 2233444432 12222 3466777888888889999988
Q ss_pred HHHHHHHh
Q 018098 320 SFEKALKL 327 (361)
Q Consensus 320 ~~~~al~l 327 (361)
.++.|.+.
T Consensus 297 ~L~~A~~~ 304 (380)
T 3c3r_A 297 RLQHAAEL 304 (380)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88877654
No 312
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=64.49 E-value=80 Score=28.32 Aligned_cols=107 Identities=11% Similarity=0.061 Sum_probs=54.7
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHH-HHHHHhhhccccccCCCCccchhHHHHHH------------HHHHHHHHHHHH
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRK-YRKALRYLDICWEKEGIDEGKSSSLRKTK------------SQIFTNSSACKL 275 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~-y~~al~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~nla~~~~ 275 (361)
++.-..++.+.+.+.++++|++|++. |.-|+.+++.- . ...-.++--.. .....++..++.
T Consensus 32 YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~-Q-----~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~ 105 (336)
T 3lpz_A 32 YEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSG-Q-----GGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLR 105 (336)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-C-----HHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCC-C-----cchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 45556677778888899999999986 44444433310 0 00000000000 011222333332
Q ss_pred hcCC--------hHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHH
Q 018098 276 KLGD--------LKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESF 321 (361)
Q Consensus 276 ~l~~--------~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~ 321 (361)
.... ..+|+.+..+.=...--++..+..+|..|..-+++.+|...|
T Consensus 106 ~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 106 LFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp TSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 2222 123333333311111224677788899999888998888776
No 313
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=63.67 E-value=14 Score=26.04 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=28.3
Q ss_pred hhhHHHHHhcchhHHhhhHHHHHHHHHHHHh
Q 018098 210 NAVDSIKVFGNEHYKKQDYKMALRKYRKALR 240 (361)
Q Consensus 210 ~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~ 240 (361)
..+..+...|..+|+.++|.+|+..++++..
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n 81 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALN 81 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHc
Confidence 4688888999999999999999999999986
No 314
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=63.09 E-value=24 Score=24.00 Aligned_cols=31 Identities=16% Similarity=0.308 Sum_probs=17.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHH
Q 018098 304 QGQAYMALNDVDAAVESFEKALKLEPNDGGI 334 (361)
Q Consensus 304 ~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~ 334 (361)
+|..+...|++++|+..|-+|+.+.|+=.+.
T Consensus 23 ~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 23 LGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 4555555666666666666666666554333
No 315
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=62.54 E-value=57 Score=34.25 Aligned_cols=93 Identities=10% Similarity=-0.102 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHhh-----cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh--CCCCHHHHHH
Q 018098 265 QIFTNSSACKLKLGDLKGALLDTEFAMR-----DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKL--EPNDGGIKKE 337 (361)
Q Consensus 265 ~~~~nla~~~~~l~~~~~Al~~~~~al~-----~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l--~P~~~~~~~~ 337 (361)
..|+-+-.+|.+.|+.++|...+.+.-+ ..| +...|.-+-..|...|+.++|...|++..+. .| |...+..
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~P-dvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYnt 205 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLL-TLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCC-CHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHH
Confidence 4567777889999999999999976543 344 6778888889999999999999999998764 45 4444444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 018098 338 LAVAKKKIHERREQEKKQYRKM 359 (361)
Q Consensus 338 l~~~~~~~~~~~~~~k~~~~~~ 359 (361)
+-.+..+.....++..+.++.|
T Consensus 206 LI~glcK~G~~~e~A~~Ll~EM 227 (1134)
T 3spa_A 206 ALQCMGRQDQDAGTIERCLEQM 227 (1134)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHhCCCcHHHHHHHHHHH
Confidence 4445454443222333444444
No 316
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=60.65 E-value=33 Score=34.30 Aligned_cols=121 Identities=9% Similarity=-0.049 Sum_probs=69.7
Q ss_pred HHHhhhHHHHHhcchhHHhh---------hHHHHHHHHHHHHhhhccccccC--CCCccchhHHHHHHHHHHHHHHHHHH
Q 018098 207 WWMNAVDSIKVFGNEHYKKQ---------DYKMALRKYRKALRYLDICWEKE--GIDEGKSSSLRKTKSQIFTNSSACKL 275 (361)
Q Consensus 207 ~~~~~a~~~~~~G~~~~~~g---------~y~~A~~~y~~al~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~nla~~~~ 275 (361)
-..+.+..++++|..+...+ ..+.|..+|.+|.-+..++...- .........+.+....++.+++.+..
T Consensus 122 l~fE~a~vLfNlaal~s~~A~~~~r~~~~~lK~A~~~fq~AAG~f~~l~~~~l~~~~~~~~~Dls~~~l~~L~~l~LAQA 201 (704)
T 2xs1_A 122 LGYEKSCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDISPDTVGTLSLIMLAQA 201 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCHHHHHHHHHHHHHHH
Confidence 44566788888887765432 37889999999988777653321 00011122356666666666655432
Q ss_pred hcCChHH-----------------HHHHHHHHhhc-------CCCc------------hhhHhHHHHHHHhcCCHHHHHH
Q 018098 276 KLGDLKG-----------------ALLDTEFAMRD-------GDDN------------VKALFRQGQAYMALNDVDAAVE 319 (361)
Q Consensus 276 ~l~~~~~-----------------Al~~~~~al~~-------~p~~------------~ka~~~~a~a~~~l~~~~~A~~ 319 (361)
..--|.+ +..+|+.|+.. .+.+ +.|+|+.|......+++-+|+.
T Consensus 202 QE~~~~Kai~~~~k~~liAkLa~~~~~~Y~~A~~~l~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa 281 (704)
T 2xs1_A 202 QEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKEVFPVLAAKHCIMQANAEYHQSILAKQQYYFGEEIA 281 (704)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHTCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHH
Confidence 2211221 22234444321 1222 3467777777778889999998
Q ss_pred HHHHHHHh
Q 018098 320 SFEKALKL 327 (361)
Q Consensus 320 ~~~~al~l 327 (361)
.++.|..+
T Consensus 282 ~L~~A~~~ 289 (704)
T 2xs1_A 282 RLQHAAEL 289 (704)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887653
No 317
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=58.94 E-value=43 Score=23.40 Aligned_cols=26 Identities=8% Similarity=0.224 Sum_probs=15.8
Q ss_pred hHHHHHHHhcCCHHHHHHHHHHHHHh
Q 018098 302 FRQGQAYMALNDVDAAVESFEKALKL 327 (361)
Q Consensus 302 ~~~a~a~~~l~~~~~A~~~~~~al~l 327 (361)
..+|.-.-..|+|++|+..|..++++
T Consensus 20 v~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 20 LKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34455556667777777666666653
No 318
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=58.65 E-value=77 Score=26.16 Aligned_cols=86 Identities=7% Similarity=-0.093 Sum_probs=61.5
Q ss_pred HHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh--hcCCCchhhHhHHHHHHHh
Q 018098 233 RKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM--RDGDDNVKALFRQGQAYMA 310 (361)
Q Consensus 233 ~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al--~~~p~~~ka~~~~a~a~~~ 310 (361)
..++++++..... +.-.-++....+|...+.++ ..+...++...|.... .+.-..+..|-..|..+..
T Consensus 58 ~lLErc~~~F~~~---------~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~ 127 (202)
T 3esl_A 58 STMERCLIYIQDM---------ETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLEN 127 (202)
T ss_dssp HHHHHHHHHHTTC---------GGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc---------ccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 4667777644321 11224666777777777765 2333667878777776 4566677788888999999
Q ss_pred cCCHHHHHHHHHHHHHhC
Q 018098 311 LNDVDAAVESFEKALKLE 328 (361)
Q Consensus 311 l~~~~~A~~~~~~al~l~ 328 (361)
.|++.+|.+.|+.+++..
T Consensus 128 ~g~~~~A~~Vy~~GI~~~ 145 (202)
T 3esl_A 128 AQFFLEAKVLLELGAENN 145 (202)
T ss_dssp TTCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHcC
Confidence 999999999999999976
No 319
>3qtm_A Uncharacterized protein C4B3.07; tetratricopeptide repeat, enhancer of translation terminatio translation; HET: CME; 2.15A {Schizosaccharomyces pombe} PDB: 3qtn_B
Probab=56.56 E-value=99 Score=26.80 Aligned_cols=106 Identities=8% Similarity=0.079 Sum_probs=64.0
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHH----HhcCC-
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACK----LKLGD- 279 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~----~~l~~- 279 (361)
.++.++....++.+.......|+.+..+...+-.+--+..+........+.........+.+++.++... ++.++
T Consensus 15 ~~d~~sql~gly~msre~le~g~i~~sv~LLNGIIHECDRLLR~~e~~~~Lpd~FhAIYAlALl~lSELa~~a~Fk~ede 94 (346)
T 3qtm_A 15 EEDNISQLWGLYEMSREKLENDDIDASVSLVFGTIHEADRILRNTEDISTLPKDFHAAYSSALLAVSELFEIAQKRLKET 94 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCSCGGGSCHHHHHHHHHHHHHHHHTHHHHGGGSCTT
T ss_pred ccchHHHHHhHHHHHHHHhhccCchhhhHHHcChHHHHHHHHHccCCCCCCCHHHHHHHHHHHHhHHHhhHHhhccCchh
Confidence 3455566777888888899999999998887655443333222221111111223333333332223332 33332
Q ss_pred ------hHHHHHHHHHHhhcCCCchhhHhHHHHHHHh
Q 018098 280 ------LKGALLDTEFAMRDGDDNVKALFRQGQAYMA 310 (361)
Q Consensus 280 ------~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~ 310 (361)
++.|++-++-.++..|++....+-++.+++.
T Consensus 95 ~~V~eFFDaALERielGLe~~p~s~~L~la~SKILlq 131 (346)
T 3qtm_A 95 NTEESYIDAAIERAQLGLDAPGNESRLFLALARAYLE 131 (346)
T ss_dssp CCHHHHHHHHHHHHHHGGGSSSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhhhhCCCChhHHHHHHHHHHH
Confidence 6788999999999999998877777777664
No 320
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=56.47 E-value=27 Score=34.63 Aligned_cols=52 Identities=19% Similarity=0.208 Sum_probs=45.9
Q ss_pred hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Q 018098 298 VKALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERR 349 (361)
Q Consensus 298 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~ 349 (361)
..+...+|...+..|+|.-|.+.+..++..+|+|.+++..++.+.+++..+.
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 4567778888899999999999999999999999999999999988887553
No 321
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=56.25 E-value=47 Score=22.98 Aligned_cols=15 Identities=27% Similarity=0.499 Sum_probs=6.3
Q ss_pred HHHHHHHHHHhCCCC
Q 018098 317 AVESFEKALKLEPND 331 (361)
Q Consensus 317 A~~~~~~al~l~P~~ 331 (361)
|++.|..+++..|+.
T Consensus 37 aie~l~~~lk~e~d~ 51 (83)
T 2v6y_A 37 AIEVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCH
Confidence 333444444445443
No 322
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=55.82 E-value=15 Score=38.22 Aligned_cols=52 Identities=10% Similarity=0.072 Sum_probs=40.9
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHH
Q 018098 270 SSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKAL 325 (361)
Q Consensus 270 la~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al 325 (361)
++..+...+.++-| .+.+..-|.++-.-|-+|.+|..+|++++|..+|++|-
T Consensus 816 l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 816 LVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 34445566666654 44667778888888999999999999999999999875
No 323
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=55.00 E-value=46 Score=30.52 Aligned_cols=118 Identities=12% Similarity=0.053 Sum_probs=68.3
Q ss_pred HHHhhhHHHHHhcchhHHhh------hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCCh
Q 018098 207 WWMNAVDSIKVFGNEHYKKQ------DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL 280 (361)
Q Consensus 207 ~~~~~a~~~~~~G~~~~~~g------~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~ 280 (361)
-..+.+..++++|-.+.+.+ ..+.|..+|++|.-+..++...-.. ....++++....++.+++.+..+.--+
T Consensus 118 l~fE~a~vLfNlaal~s~~A~~~~r~~lk~A~~~fq~AAG~f~~l~~~~~~--~~~~Dls~~~l~~L~~l~LAQAQE~~~ 195 (392)
T 1zb1_A 118 LAFEKSCTLFNIAVIFTQIARENINEDYKNSIANLTKAFSCFEYLSENFLN--SPSVDLQSENTRFLANICHAEAQELFV 195 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHHHCCC--CSSGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 34456777777776665433 4788999999998887766443211 112235566666666555443321111
Q ss_pred HH--------------------HHHHHHHHh---hcCC--------Cc-------------hhhHhHHHHHHHhcCCHHH
Q 018098 281 KG--------------------ALLDTEFAM---RDGD--------DN-------------VKALFRQGQAYMALNDVDA 316 (361)
Q Consensus 281 ~~--------------------Al~~~~~al---~~~p--------~~-------------~ka~~~~a~a~~~l~~~~~ 316 (361)
.+ +..+|+.|+ ...+ .. +.|+|+.|......+++-+
T Consensus 196 ~Kai~~~~~~~k~~liAkLa~~~~~~Y~~a~~~l~~~~~~~~~~~~~~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~Ge 275 (392)
T 1zb1_A 196 LKLLNDQISSKQYTLISKLSRATCNLFQKCHDFMKEIDDDVAIYGEPKWKTTVTCKLHFYKSLSAYYHGLHLEEENRVGE 275 (392)
T ss_dssp HHHTTSTTGGGCHHHHHHHHHHHHHHHHHHHHHHHSCCCTTTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTH
T ss_pred HHHHhccccCCchhHHHHHHHHHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH
Confidence 11 223444443 2121 01 3366777777778888888
Q ss_pred HHHHHHHHHH
Q 018098 317 AVESFEKALK 326 (361)
Q Consensus 317 A~~~~~~al~ 326 (361)
|+..++.|.+
T Consensus 276 aIa~L~~A~~ 285 (392)
T 1zb1_A 276 AIAFLDFSMQ 285 (392)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887764
No 324
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=54.13 E-value=52 Score=22.82 Aligned_cols=13 Identities=15% Similarity=0.322 Sum_probs=5.6
Q ss_pred HHHHHHHHHhCCC
Q 018098 318 VESFEKALKLEPN 330 (361)
Q Consensus 318 ~~~~~~al~l~P~ 330 (361)
++.|..+++..|+
T Consensus 46 ie~l~~alk~e~d 58 (83)
T 2w2u_A 46 IEVLAQLVSLYRD 58 (83)
T ss_dssp HHHHHHHHHHSTT
T ss_pred HHHHHHHHHHCCC
Confidence 3334444444554
No 325
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=53.70 E-value=22 Score=34.09 Aligned_cols=74 Identities=14% Similarity=-0.030 Sum_probs=54.5
Q ss_pred hHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 212 VDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 212 a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
|..+.-+=..|...+.|+.|.....++.- |+.. .-+...+..++.+|.++.-.++|.+|.+++..|+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~f------P~~~-------~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~ 297 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEY------PHTD-------VSSSLEARYFFYLSKINAIQLDYSTANEYIIAAI 297 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCS------CTTT-------SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcC------Cccc-------CCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 44555555666777888888888888742 1100 0234457788889999999999999999999999
Q ss_pred hcCCCch
Q 018098 292 RDGDDNV 298 (361)
Q Consensus 292 ~~~p~~~ 298 (361)
+..|.+.
T Consensus 298 rkap~~~ 304 (523)
T 4b4t_S 298 RKAPHNS 304 (523)
T ss_dssp SSCSCSS
T ss_pred HhCCcch
Confidence 9887653
No 326
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=53.49 E-value=29 Score=29.29 Aligned_cols=59 Identities=8% Similarity=-0.037 Sum_probs=43.4
Q ss_pred HhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHhh
Q 018098 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAMR 292 (361)
Q Consensus 224 ~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al~ 292 (361)
..|+-+.|...|++|..++... ....+|....+..|.+..|.. +++.++|+..+.+|+.
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEH----------PDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHC----------GGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhh----------CCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3455788999999999876531 112456666777888777765 5889999999999976
No 327
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=52.65 E-value=22 Score=29.44 Aligned_cols=55 Identities=15% Similarity=-0.011 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHH-----HHHHhcCCHH
Q 018098 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQG-----QAYMALNDVD 315 (361)
Q Consensus 261 ~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a-----~a~~~l~~~~ 315 (361)
...+..++.+|..++-.++|.+|-+++..|++..|.......++. .+.+-+|+..
T Consensus 11 ~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 11 AQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 355677888999999999999999999999999887643333222 2334556654
No 328
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.43 E-value=20 Score=38.05 Aligned_cols=65 Identities=9% Similarity=-0.217 Sum_probs=50.2
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhh-cCC----------------------CchhhHhHHHHHHHhcCCHHHHHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMR-DGD----------------------DNVKALFRQGQAYMALNDVDAAVESFE 322 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~-~~p----------------------~~~ka~~~~a~a~~~l~~~~~A~~~~~ 322 (361)
..+-+|.|++..|++++|..++.+|-. +.. .-+..|+.....+...+.++.+++.-+
T Consensus 844 ~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~ 923 (1139)
T 4fhn_B 844 AVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSL 923 (1139)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 347789999999999999999988841 111 013455666778888999999999999
Q ss_pred HHHHhCCC
Q 018098 323 KALKLEPN 330 (361)
Q Consensus 323 ~al~l~P~ 330 (361)
.|++..+.
T Consensus 924 lAi~~~~~ 931 (1139)
T 4fhn_B 924 LADASKET 931 (1139)
T ss_dssp HHHHHCCS
T ss_pred HHHHhccC
Confidence 99988754
No 329
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=52.10 E-value=34 Score=35.56 Aligned_cols=76 Identities=12% Similarity=-0.018 Sum_probs=47.3
Q ss_pred HHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCc--cchhHH------HHHHHHHHHHHHHHHHhcCChHHHHHH
Q 018098 215 IKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDE--GKSSSL------RKTKSQIFTNSSACKLKLGDLKGALLD 286 (361)
Q Consensus 215 ~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~nla~~~~~l~~~~~Al~~ 286 (361)
-+-+|..++..|++++|..+|++|-.-+. ....... +....+ .......|...+..+.+.+-|+.++..
T Consensus 843 ~yv~gr~~L~~ge~~~A~~~F~kAA~gl~---~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~f 919 (950)
T 4gq2_M 843 VYLKALIYLKSKEAVKAVRCFKTTSLVLY---SHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEF 919 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCTTC---SSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhhcc---cCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHH
Confidence 47789999999999999999999864221 0000000 000000 112234667777777777778888888
Q ss_pred HHHHhhc
Q 018098 287 TEFAMRD 293 (361)
Q Consensus 287 ~~~al~~ 293 (361)
++.||..
T Consensus 920 A~lAI~~ 926 (950)
T 4gq2_M 920 SLLADAS 926 (950)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 8888854
No 330
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=51.46 E-value=28 Score=29.59 Aligned_cols=54 Identities=15% Similarity=-0.006 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHh
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al 291 (361)
-+.|...|++|+.++... ....+|....+..|.+..|.. +++.++|+..+.+|+
T Consensus 146 ~e~a~~aY~~A~~iA~~~----------L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 146 AENSLVAYKAASDIAMTE----------LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcc----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 356788899998866421 111466777777888777776 688888888777766
No 331
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=50.34 E-value=1.3e+02 Score=26.50 Aligned_cols=26 Identities=15% Similarity=-0.035 Sum_probs=20.8
Q ss_pred chhhHhHHHHHHHhcCCHHHHHHHHH
Q 018098 297 NVKALFRQGQAYMALNDVDAAVESFE 322 (361)
Q Consensus 297 ~~ka~~~~a~a~~~l~~~~~A~~~~~ 322 (361)
++..+..+|..|..-+++.+|...|-
T Consensus 133 dp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 133 DPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 46778888888888888888888763
No 332
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=49.32 E-value=59 Score=23.09 Aligned_cols=43 Identities=12% Similarity=0.198 Sum_probs=23.3
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 018098 313 DVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERREQEKKQ 355 (361)
Q Consensus 313 ~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~~~k~~ 355 (361)
...+++..-.++++.+|+|+.++..+........-.+..+-..
T Consensus 31 ~~~~~l~~Al~~L~~~psNPa~LAe~Qa~lseynl~RNaQSnt 73 (92)
T 2g0u_A 31 DLNKQLQDAQANLTKNPSDPTALANYQMIMSEYNLYRNAQSSA 73 (92)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444556677877776666555554444444444333
No 333
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=48.91 E-value=43 Score=27.57 Aligned_cols=34 Identities=21% Similarity=0.120 Sum_probs=25.0
Q ss_pred hhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCC
Q 018098 298 VKALFRQGQAYMALNDVDAAVESFEKALKLEPND 331 (361)
Q Consensus 298 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~ 331 (361)
+..+|.+|..++..++|.+|.+.|..|++..|.+
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~ 47 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRS 47 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHh
Confidence 4566777777777777777777777777777654
No 334
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=48.08 E-value=38 Score=29.23 Aligned_cols=53 Identities=17% Similarity=0.113 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHh
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al 291 (361)
-+.|...|++|+.++..+ ...+|....+..|.+..|.. +++.++|+..+.+|+
T Consensus 172 ~e~a~~aY~~A~~iA~~L-----------~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 225 (260)
T 2npm_A 172 AEDALKAYKDATVVAKDL-----------EPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAF 225 (260)
T ss_dssp HHHHHHHHHHHHHHHTTS-----------CTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhC-----------CCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 356888899999866111 11466777788888887777 688999988887776
No 335
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=45.74 E-value=38 Score=29.25 Aligned_cols=54 Identities=15% Similarity=0.026 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHh
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al 291 (361)
-+.|...|++|..++..- ....+|....+..|.+..|.. +++.++|+..+.+|+
T Consensus 151 ~e~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 151 AESTLTAYKAAQDIATTE----------LAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc----------CCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 357888899999876421 112467777788888888777 589999988888766
No 336
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=45.70 E-value=38 Score=29.17 Aligned_cols=54 Identities=15% Similarity=-0.006 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHh
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al 291 (361)
-+.|...|++|..++..- ....+|....+..|.+..|.. +++.++|+..+.+|+
T Consensus 172 ~e~a~~aY~~A~~iA~~~----------L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 172 AENSLVAYKAASDIAMTE----------LPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 356778898888865321 112466777777888777776 588888887777665
No 337
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=45.38 E-value=1.3e+02 Score=27.27 Aligned_cols=64 Identities=17% Similarity=0.092 Sum_probs=44.7
Q ss_pred HHHHHHHHhhc-----CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHH
Q 018098 283 ALLDTEFAMRD-----GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE------PNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 283 Al~~~~~al~~-----~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~------P~~~~~~~~l~~~~~~~~ 346 (361)
++..|.+|+.. +....-.|..+|-.+++.+++.+|++.+-.|-..- -+|.++++.+-++...+-
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAneli 350 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIANDLI 350 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHh
Confidence 55556666633 22345567778888999999999999998886642 247788888877766553
No 338
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=45.38 E-value=39 Score=28.90 Aligned_cols=54 Identities=11% Similarity=-0.020 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHh
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al 291 (361)
-+.|...|++|..++... ....+|....+..|.+..|.. +++.++|+..+.+|+
T Consensus 147 ~~~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEH----------MQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 466788899998866421 111466777778888877776 588888888777765
No 339
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=45.20 E-value=73 Score=21.95 Aligned_cols=20 Identities=10% Similarity=0.162 Sum_probs=10.0
Q ss_pred HHHhcCCHHHHHHHHHHHHH
Q 018098 307 AYMALNDVDAAVESFEKALK 326 (361)
Q Consensus 307 a~~~l~~~~~A~~~~~~al~ 326 (361)
-.-..|+|++|+..|..+++
T Consensus 22 ~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 22 DLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 33444555555555555444
No 340
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=44.85 E-value=28 Score=34.52 Aligned_cols=50 Identities=14% Similarity=-0.001 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVD 315 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~ 315 (361)
.....|...+..|+|.-|.+.++.++..+|+|..|...+|.+|.++|...
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 35667788889999999999999999999999999999999999988554
No 341
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=44.22 E-value=38 Score=24.32 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=30.4
Q ss_pred chHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhh
Q 018098 204 ELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYL 242 (361)
Q Consensus 204 ~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~ 242 (361)
+.+++-.-=.....+|..+...|+++.|+.++-+|+.++
T Consensus 12 d~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc 50 (95)
T 1om2_A 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVC 50 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 444444445556788999999999999999999999854
No 342
>3rk3_E Complexin-1; snare proteins, membrane fusion, membrane protein-exocytosis transport protein complex, membrane protein-exocytosis COMP; 3.50A {Homo sapiens} PDB: 3rl0_g
Probab=44.06 E-value=48 Score=21.18 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=24.8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 018098 328 EPNDGGIKKELAVAKKKIHERREQEKKQYRKM 359 (361)
Q Consensus 328 ~P~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~ 359 (361)
...++++.+...+....+.++++..+..|.+|
T Consensus 4 ~~kdpda~kke~E~~eAlrq~Ee~Rk~Kh~kM 35 (63)
T 3rk3_E 4 GSKLPDAAKKFEEAQEALRQAEEERKAKYAKM 35 (63)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567778888888888888888888888776
No 343
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=42.18 E-value=84 Score=21.82 Aligned_cols=28 Identities=11% Similarity=0.081 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 018098 317 AVESFEKALKLEPNDGGIKKELAVAKKK 344 (361)
Q Consensus 317 A~~~~~~al~l~P~~~~~~~~l~~~~~~ 344 (361)
++..-.++++.+|+|+..+..+.....+
T Consensus 29 ~v~~Ai~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 29 ELTLALDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3333334455566666555544444333
No 344
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=42.11 E-value=31 Score=32.30 Aligned_cols=55 Identities=13% Similarity=0.049 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
|+..++.++.|+.+++... ..-......++.-+|.+|+.+++|++|+.+++++|.
T Consensus 164 y~~I~~DL~~A~~~L~~~~----------~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEK----------NNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSC----------CTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccc----------cCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 3445555666666543210 012334556888899999999999999999999985
No 345
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=42.10 E-value=54 Score=23.17 Aligned_cols=70 Identities=11% Similarity=0.057 Sum_probs=39.9
Q ss_pred HHHhhhHHHHHhcchhHHh---hhHHHHHHHHHHHHhhhccccccC-CCCccchhHHHHHHHHHHHHHHHHHHh
Q 018098 207 WWMNAVDSIKVFGNEHYKK---QDYKMALRKYRKALRYLDICWEKE-GIDEGKSSSLRKTKSQIFTNSSACKLK 276 (361)
Q Consensus 207 ~~~~~a~~~~~~G~~~~~~---g~y~~A~~~y~~al~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~nla~~~~~ 276 (361)
...+.|-.+.+.|-..=.. |+-++|+.+|++.+..+..-..-+ ....+.+............||..+-.+
T Consensus 11 ~~h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v~~R 84 (89)
T 3eab_A 11 VFHKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMAKDR 84 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566667777766666 778888888888887665321111 113333444444555555555555433
No 346
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=41.87 E-value=25 Score=24.20 Aligned_cols=25 Identities=12% Similarity=0.044 Sum_probs=17.2
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 267 FTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 267 ~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
...+|.=|..+|+|+.|+.+|+-++
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~ 39 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVL 39 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHH
Confidence 3456666667777777777777666
No 347
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=41.52 E-value=38 Score=24.29 Aligned_cols=28 Identities=14% Similarity=0.007 Sum_probs=14.4
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHhhcCC
Q 018098 268 TNSSACKLKLGDLKGALLDTEFAMRDGD 295 (361)
Q Consensus 268 ~nla~~~~~l~~~~~Al~~~~~al~~~p 295 (361)
..+|..++..|+++.|+.++-+||...|
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 3445555555555555555555555444
No 348
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=40.96 E-value=5.7 Score=34.32 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=0.0
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccc
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW 246 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~ 246 (361)
...|..+...|..+=+.|+|++|+.+|.+|++++..+.
T Consensus 20 ~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~al 57 (257)
T 2ymb_A 20 STAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVL 57 (257)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 34577788888888999999999999999999886553
No 349
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=40.91 E-value=32 Score=32.31 Aligned_cols=32 Identities=25% Similarity=0.164 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 261 ~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
.....++.-+|.+|+.+++|++|+.+++++|.
T Consensus 193 ~tk~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 193 VNRWAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp CCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 34567888899999999999999999999985
No 350
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=40.19 E-value=21 Score=33.95 Aligned_cols=60 Identities=10% Similarity=0.111 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 227 DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 227 ~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
=|+..++.++.|+.+++...... ..-......++.-+|.+|+.+++|++|+.+++++|..
T Consensus 173 vy~~I~~DL~~A~~~Lp~~~~~~-------~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 173 VYAQSINDLEEALELIPETYVRD-------AKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHHSCTTCCCS-------STTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccCcc-------cCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 34555666666666553211100 0123345578889999999999999999999999853
No 351
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=39.85 E-value=53 Score=27.84 Aligned_cols=54 Identities=11% Similarity=0.033 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHh
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAM 291 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al 291 (361)
-+.|...|++|..++..- ....+|....+..|.+..|.. +++.++|+..+.+|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~----------L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKE----------MPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHH----------SCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh----------CCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 466788899998866421 111456777777888777765 488888888777665
No 352
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=39.85 E-value=36 Score=32.12 Aligned_cols=56 Identities=16% Similarity=0.052 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
|+..++.++.|+.+++... ..-......++.-+|.+|+.+++|++|+.+++++|..
T Consensus 176 y~~I~~DL~~A~~~L~~~~----------~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQET----------SNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSC----------CTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccc----------cCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4555666666666553210 0123345568888999999999999999999999864
No 353
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=39.40 E-value=55 Score=28.31 Aligned_cols=58 Identities=22% Similarity=0.174 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHhhc
Q 018098 228 YKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLK-LGDLKGALLDTEFAMRD 293 (361)
Q Consensus 228 y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~-l~~~~~Al~~~~~al~~ 293 (361)
-+.|...|++|..++..-.. ....+|....+..|.+..|.. +++.++|+..+.+|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~--------~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLE--------KYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCT--------TGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcC--------CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 46677888888876532110 012566777777888877775 58888888887777643
No 354
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=39.22 E-value=1.2e+02 Score=22.56 Aligned_cols=17 Identities=29% Similarity=0.378 Sum_probs=7.2
Q ss_pred HHHHHHHHHHhCCCCHH
Q 018098 317 AVESFEKALKLEPNDGG 333 (361)
Q Consensus 317 A~~~~~~al~l~P~~~~ 333 (361)
|++.|..+++..+.++.
T Consensus 44 Aie~l~~alk~e~~~~~ 60 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQGDK 60 (117)
T ss_dssp HHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHhccCCHH
Confidence 33334444444544443
No 355
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=38.91 E-value=1.8e+02 Score=27.00 Aligned_cols=64 Identities=13% Similarity=0.115 Sum_probs=44.4
Q ss_pred HHHHHHHHhhc-----CCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHH
Q 018098 283 ALLDTEFAMRD-----GDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE------PNDGGIKKELAVAKKKIH 346 (361)
Q Consensus 283 Al~~~~~al~~-----~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~------P~~~~~~~~l~~~~~~~~ 346 (361)
++..|.+|+.. ....+-.|..+|-.+++.+++.+|+..+-.|-..- -+|.++++.+-++...+-
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAneli 372 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDVI 372 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHhh
Confidence 44555555532 22235566778888999999999999998886642 347888888887766553
No 356
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=37.38 E-value=20 Score=32.49 Aligned_cols=48 Identities=10% Similarity=-0.023 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 231 ALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 231 A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
++..|.+|+...+..+ .....--|.-+|.++.+.+++.+|+..+..|-
T Consensus 276 ~l~L~~~AI~sa~~yY-------------~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa 323 (472)
T 3re2_A 276 AEELFKEAITVAKREY-------------SDHHIYPYTYLGGYYYRKKKYYEAIASWVDAG 323 (472)
T ss_dssp HHHHHHHHHHHHHHHS-------------TTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-------------ccCCccchhhhhhhhhhcchHHHHHHHHHHHH
Confidence 6778888888665442 22233457788999999999999999887765
No 357
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=37.37 E-value=1.3e+02 Score=29.69 Aligned_cols=30 Identities=17% Similarity=0.152 Sum_probs=19.0
Q ss_pred HhHHHHHH--HhcCCHHHHHHHHHHHHHhCCCC
Q 018098 301 LFRQGQAY--MALNDVDAAVESFEKALKLEPND 331 (361)
Q Consensus 301 ~~~~a~a~--~~l~~~~~A~~~~~~al~l~P~~ 331 (361)
+..+..++ +..|+|++|++.+++ +.+-|-+
T Consensus 539 Ll~l~~f~~~~~~g~~~~AL~~i~~-L~llPl~ 570 (661)
T 2qx5_A 539 LLNISSIRELYFNKQWQETLSQMEL-LDLLPFS 570 (661)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH-TSCSCC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHh-CCCCCCC
Confidence 33444443 677888888888876 5566655
No 358
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=37.29 E-value=2.6e+02 Score=25.98 Aligned_cols=51 Identities=12% Similarity=0.115 Sum_probs=38.2
Q ss_pred chhhHhHHHHHHHhcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHHHH
Q 018098 297 NVKALFRQGQAYMALNDVDAAVESFEKALKL------EPNDGGIKKELAVAKKKIHE 347 (361)
Q Consensus 297 ~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l------~P~~~~~~~~l~~~~~~~~~ 347 (361)
..-.|..+|-.++..++|.+|++.+..|-.. .-+|.++++.+.++...+..
T Consensus 302 hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIanelip 358 (489)
T 4gq4_A 302 HIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDVIP 358 (489)
T ss_dssp CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHTHHH
T ss_pred cccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHHhhh
Confidence 3556666777888889999999999988764 34578888888777665543
No 359
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=37.24 E-value=31 Score=32.20 Aligned_cols=32 Identities=9% Similarity=0.088 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 260 RKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 260 ~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
......++.-+|.+|+.+++|++|+.+++++|
T Consensus 197 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 197 HATQAAANMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp SCBHHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 34566788899999999999999999999987
No 360
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=36.82 E-value=47 Score=31.21 Aligned_cols=32 Identities=16% Similarity=0.023 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 261 ~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
.....++.-+|.+|+.+++|++|+.+++++|.
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 34557888999999999999999999999984
No 361
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=36.79 E-value=52 Score=25.61 Aligned_cols=45 Identities=9% Similarity=-0.029 Sum_probs=38.3
Q ss_pred CchHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccc
Q 018098 203 NELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWE 247 (361)
Q Consensus 203 ~~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~ 247 (361)
.++...+..|..+...|..+...|+++.|.-.|.+++.++-...+
T Consensus 31 i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ip 75 (146)
T 2xze_A 31 IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLP 75 (146)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcc
Confidence 347788889999999999999999999999999999887754333
No 362
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=36.78 E-value=60 Score=30.33 Aligned_cols=47 Identities=15% Similarity=0.022 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhhcCC--------CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh
Q 018098 281 KGALLDTEFAMRDGD--------DNVKALFRQGQAYMALNDVDAAVESFEKALKL 327 (361)
Q Consensus 281 ~~Al~~~~~al~~~p--------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 327 (361)
+..+.+++.|+.+=| +..-|+..+|.+|+.+++|++|++..++++..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 455555666654433 23567888999999999999999999998863
No 363
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=36.10 E-value=43 Score=22.68 Aligned_cols=30 Identities=13% Similarity=0.007 Sum_probs=26.3
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHhhcCCCc
Q 018098 268 TNSSACKLKLGDLKGALLDTEFAMRDGDDN 297 (361)
Q Consensus 268 ~nla~~~~~l~~~~~Al~~~~~al~~~p~~ 297 (361)
..+|..++..|++++|+.++-+||...|.=
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 557888889999999999999999998753
No 364
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=35.37 E-value=23 Score=32.84 Aligned_cols=48 Identities=13% Similarity=0.131 Sum_probs=34.6
Q ss_pred HHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 231 ALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 231 A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
++..|.+|+...+..+ ....+--|..+|.++.+.+++.+|+..+..|-
T Consensus 298 ~~~L~~~AI~sa~~~Y-------------~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa 345 (550)
T 3u84_A 298 PLTLYHKGIASAKTYY-------------RDEHIYPYMYLAGYHCRNRNVREALQAWADTA 345 (550)
T ss_dssp HHHHHHHHHHHHHHHS-------------TTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-------------ccCCccceeecchhhhhcchHHHHHHHHHHHH
Confidence 4677888877655442 22233457788999999999999999887665
No 365
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=34.71 E-value=75 Score=29.83 Aligned_cols=49 Identities=12% Similarity=0.122 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHhhcCCC--------chhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 280 LKGALLDTEFAMRDGDD--------NVKALFRQGQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 280 ~~~Al~~~~~al~~~p~--------~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
|+..+.+++.|+.+=|. ..-|+-.+|.+|+.+++|++|++..++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 45667777777765443 24577888999999999999999999998753
No 366
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=34.47 E-value=24 Score=32.69 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=34.2
Q ss_pred HHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 231 ALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 231 A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
+++.|.+|++..... +.....-.|..+|.++.+.++|.+|+..+..|-
T Consensus 283 ~~~Lf~~AI~~ar~~-------------Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa 330 (489)
T 4gq4_A 283 PLTLYHKGIASAKTY-------------YRDEHIYPYMYLAGYHCRNRNVREALQAWADTA 330 (489)
T ss_dssp HHHHHHHHHHHHHHH-------------STTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-------------cccCcccceeecchHHHHhhhHHHHHHHhhhhh
Confidence 456667776655433 222334557888999999999999999988775
No 367
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=33.22 E-value=68 Score=30.01 Aligned_cols=47 Identities=15% Similarity=0.099 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhcCC--------CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh
Q 018098 281 KGALLDTEFAMRDGD--------DNVKALFRQGQAYMALNDVDAAVESFEKALKL 327 (361)
Q Consensus 281 ~~Al~~~~~al~~~p--------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 327 (361)
+..+.+++.|+.+=| +..-|+.-+|.+|+.+++|++|++..++++..
T Consensus 171 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 171 TEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 445555555554323 23567888899999999999999999998863
No 368
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=33.20 E-value=51 Score=31.02 Aligned_cols=34 Identities=12% Similarity=0.015 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 260 RKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 260 ~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
......++.-+|.+|+.+++|++|+.+++++|..
T Consensus 193 r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 193 LFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 3456678888999999999999999999999954
No 369
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=33.02 E-value=43 Score=23.58 Aligned_cols=35 Identities=9% Similarity=-0.163 Sum_probs=29.6
Q ss_pred chHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHH
Q 018098 204 ELSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKA 238 (361)
Q Consensus 204 ~~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~a 238 (361)
...+.++.|..+.+-|..++++|++..|+.++.=+
T Consensus 31 ~a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa 65 (87)
T 2pmr_A 31 DEEAVVERALNYRDDSVYYLEKGDHITSFGCITYA 65 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45677788999999999999999999999886544
No 370
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=31.84 E-value=44 Score=23.47 Aligned_cols=35 Identities=14% Similarity=-0.013 Sum_probs=29.0
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHH
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKAL 239 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al 239 (361)
..+.++.|..+.+-|..++++|++..|+.++.=+-
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~ 62 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAW 62 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45667789999999999999999999998865443
No 371
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=30.80 E-value=1.4e+02 Score=20.99 Aligned_cols=14 Identities=14% Similarity=0.209 Sum_probs=6.2
Q ss_pred HHHHHHHHHHhCCC
Q 018098 317 AVESFEKALKLEPN 330 (361)
Q Consensus 317 A~~~~~~al~l~P~ 330 (361)
|++.|..+++..|+
T Consensus 41 Aie~l~~alk~e~~ 54 (93)
T 1wfd_A 41 GIDMLLQVLKGTKE 54 (93)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCC
Confidence 33444444444544
No 372
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=30.62 E-value=84 Score=29.73 Aligned_cols=48 Identities=21% Similarity=0.056 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhcCC-----------CchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 281 KGALLDTEFAMRDGD-----------DNVKALFRQGQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 281 ~~Al~~~~~al~~~p-----------~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
+..+.+++.|+..=| +..-|+-.+|.+|+.+++|++|+...++++...
T Consensus 175 ~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 175 AQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 455556666654333 224577889999999999999999999998753
No 373
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=30.60 E-value=1.4e+02 Score=21.01 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHh
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al 291 (361)
..+.....-|.-+.+.++|.+|+..+.++.
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~ 80 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKAL 80 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 333344444444444444444444444444
No 374
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=30.35 E-value=2e+02 Score=22.66 Aligned_cols=70 Identities=7% Similarity=0.047 Sum_probs=44.9
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHH-HHHHHHHHhcCChHHHHHHHHHHh
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIF-TNSSACKLKLGDLKGALLDTEFAM 291 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~nla~~~~~l~~~~~Al~~~~~al 291 (361)
..-...|..+|+.|+|-+|.+.++.+-.-. ...+. ...-....+. .--|..+.+.|+...|...+.+|+
T Consensus 33 ~~~~~~~i~lFn~g~yfeaHEvLEe~W~~~------~~~~~----er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al 102 (161)
T 2ijq_A 33 RRAVVHGVRLYNSGEFHESHDCFEDEWYNY------GRGNT----ESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSL 102 (161)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTTTT------CSSSH----HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCchHHHHHHHHHHHhc------CCCch----HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 344667888999999999999998876511 00100 0111222223 334455566799999999999998
Q ss_pred h
Q 018098 292 R 292 (361)
Q Consensus 292 ~ 292 (361)
.
T Consensus 103 ~ 103 (161)
T 2ijq_A 103 Q 103 (161)
T ss_dssp H
T ss_pred H
Confidence 6
No 375
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=30.17 E-value=40 Score=32.16 Aligned_cols=33 Identities=12% Similarity=0.039 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc
Q 018098 261 KTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD 293 (361)
Q Consensus 261 ~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~ 293 (361)
.....++.-+|.+|+..++|++|+.+|+++|..
T Consensus 179 ~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 179 ATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345568888999999999999999999999964
No 376
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=28.49 E-value=83 Score=19.80 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=30.6
Q ss_pred hHHHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhh
Q 018098 205 LSWWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYL 242 (361)
Q Consensus 205 ~~~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~ 242 (361)
.++.+..|..+-..+...+.=.+...|++..++||+++
T Consensus 13 ~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL 50 (53)
T 2rkl_A 13 RASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLL 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHH
Confidence 34456678888888888888889999999999999854
No 377
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=28.38 E-value=77 Score=25.27 Aligned_cols=49 Identities=6% Similarity=0.072 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhCC
Q 018098 281 KGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLEP 329 (361)
Q Consensus 281 ~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P 329 (361)
..|+.....+...+|.-....-++..++..+.+....+..|...+..||
T Consensus 73 ~~a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP 121 (175)
T 4abx_A 73 GEAVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADP 121 (175)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCH
T ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCH
Confidence 3455555555667777667777778888887777777776666666665
No 378
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=28.35 E-value=2.2e+02 Score=22.44 Aligned_cols=58 Identities=14% Similarity=0.162 Sum_probs=43.5
Q ss_pred HHHHHHhcCChHHHHHHHHHHhhcCCCc------hhhHhH-HHHHH--HhcCCHHHHHHHHHHHHHh
Q 018098 270 SSACKLKLGDLKGALLDTEFAMRDGDDN------VKALFR-QGQAY--MALNDVDAAVESFEKALKL 327 (361)
Q Consensus 270 la~~~~~l~~~~~Al~~~~~al~~~p~~------~ka~~~-~a~a~--~~l~~~~~A~~~~~~al~l 327 (361)
.+..++..|+|-+|=+.++.+-...+.. .+.+.+ +|.++ ...|+...|...+.+++..
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4455566799999999999888776544 455556 55554 4569999999999999873
No 379
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=28.16 E-value=12 Score=35.04 Aligned_cols=38 Identities=18% Similarity=0.273 Sum_probs=0.0
Q ss_pred HhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhcccc
Q 018098 209 MNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDICW 246 (361)
Q Consensus 209 ~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~ 246 (361)
++.|..+...|..+-+.|+|++|+.+|.+|++++..+.
T Consensus 8 ~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~~ 45 (444)
T 2zan_A 8 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 45 (444)
T ss_dssp --------------------------------------
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 34677777888888899999999999999999887653
No 380
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=27.71 E-value=3.7e+02 Score=26.17 Aligned_cols=117 Identities=7% Similarity=-0.130 Sum_probs=66.3
Q ss_pred cchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhcCCCch
Q 018098 219 GNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRDGDDNV 298 (361)
Q Consensus 219 G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ 298 (361)
+...+.+++.+.|...+.+..+-.. . .......++..+|.-.+..+...++...+.++.....+..
T Consensus 221 ~~~rlar~d~~~A~~~~~~~~~~~~-------~-------~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (618)
T 1qsa_A 221 AFASVARQDAENARLMIPSLAQAQQ-------L-------NEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTS 286 (618)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHTT-------C-------CHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHH
T ss_pred HHHHHHhcCHHHHHHHHHhhhhccC-------C-------CHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChH
Confidence 4444556677888888776543110 0 1112223334444444444546677788887776555443
Q ss_pred hhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Q 018098 299 KALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHERRE 350 (361)
Q Consensus 299 ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~~~ 350 (361)
. .-.++...+..++++.|...|++.-.-.+.......-++.+...+.+..+
T Consensus 287 ~-~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~ 337 (618)
T 1qsa_A 287 L-IERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAE 337 (618)
T ss_dssp H-HHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHH
T ss_pred H-HHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHH
Confidence 3 33444444567999999999876544223345566777777665544443
No 381
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=26.76 E-value=30 Score=17.97 Aligned_cols=19 Identities=26% Similarity=0.251 Sum_probs=11.9
Q ss_pred ecCCCCCCCcceEEecCCC
Q 018098 109 ANAGPNTNGSQFFITTTRT 127 (361)
Q Consensus 109 ~~~~~~~~~sqF~I~~~~~ 127 (361)
|......-.|..||++.+.
T Consensus 2 a~kpeKR~aSSvFITLapp 20 (26)
T 2k9u_B 2 ASKPEKRVASSVFITLAPP 20 (26)
T ss_dssp CCCSSSSCEEEEEEEECCS
T ss_pred CCcchhheeeeEEEEecCc
Confidence 3333344567789998764
No 382
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=32.65 E-value=14 Score=36.86 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=31.9
Q ss_pred hhHhHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Q 018098 299 KALFRQGQAYMALNDVDAAVESFEKALKLEPNDGGIKKELAVAKKKIHER 348 (361)
Q Consensus 299 ka~~~~a~a~~~l~~~~~A~~~~~~al~l~P~~~~~~~~l~~~~~~~~~~ 348 (361)
.+...+|+..+..|+|.-|.+.++.++..+|+|.+++..++.+.+++..+
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~ 511 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQ 511 (668)
Confidence 34455566666666666677666666666776666666666666665543
No 383
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=26.52 E-value=1.6e+02 Score=20.16 Aligned_cols=48 Identities=15% Similarity=0.240 Sum_probs=32.1
Q ss_pred HhHHHHHHHhcCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHHHHH
Q 018098 301 LFRQGQAYMALNDVDAAVESFEKALKLE------PNDGGIKKELAVAKKKIHER 348 (361)
Q Consensus 301 ~~~~a~a~~~l~~~~~A~~~~~~al~l~------P~~~~~~~~l~~~~~~~~~~ 348 (361)
...+|.=|..+|+|+.|+.+|+.+++.- =.|+..+..=..++..+.+.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~~~~ei~~E 68 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQVWQEINVE 68 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHHHHHHHHHH
Confidence 4567888899999999999999987641 12544444444444444443
No 384
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=25.86 E-value=2.3e+02 Score=21.83 Aligned_cols=21 Identities=10% Similarity=0.074 Sum_probs=10.2
Q ss_pred HHHHHHHhcCChHHHHHHHHH
Q 018098 269 NSSACKLKLGDLKGALLDTEF 289 (361)
Q Consensus 269 nla~~~~~l~~~~~Al~~~~~ 289 (361)
..|..|..-|+++.|--.+-+
T Consensus 45 r~A~~y~~egd~e~AYily~R 65 (146)
T 2xze_A 45 RMASIYSEEGNIEHAFILYNK 65 (146)
T ss_dssp HHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHH
Confidence 334455555555555444443
No 385
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=25.68 E-value=1.6e+02 Score=24.65 Aligned_cols=42 Identities=12% Similarity=-0.149 Sum_probs=32.9
Q ss_pred HHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCC
Q 018098 272 ACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALND 313 (361)
Q Consensus 272 ~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~ 313 (361)
.++++.|.|++|.+.+++.+.-+|.+-+.-..+..+-...+.
T Consensus 122 ~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~ 163 (235)
T 3bu8_A 122 IICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNL 163 (235)
T ss_dssp HHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCT
T ss_pred HHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCc
Confidence 566899999999999999999887777666666666555443
No 386
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=25.66 E-value=2.9e+02 Score=23.02 Aligned_cols=63 Identities=10% Similarity=0.068 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh--hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 260 RKTKSQIFTNSSACKLKLGDLKGALLDTEFAM--RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 260 ~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al--~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
++....+|...+.+ .+.+...|.... .+.-..+..|-..|..+...|++.+|...|+.+++..
T Consensus 116 D~RyLklWl~Ya~~------~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 180 (223)
T 4aez_C 116 DVRYLRIWMQYVNY------IDEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMK 180 (223)
T ss_dssp CHHHHHHHHHHHTT------CSCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHc------cCCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 44445555554442 235555565555 4556667777788999999999999999999999976
No 387
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=25.65 E-value=1.4e+02 Score=19.14 Aligned_cols=52 Identities=8% Similarity=-0.073 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCC-chhhHhHHHHHHHhcCCHHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDD-NVKALFRQGQAYMALNDVDAAV 318 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~a~a~~~l~~~~~A~ 318 (361)
.+..+|..-......++|....+ .|...+. ..-+-.-+...+...|+|++|+
T Consensus 8 lLAe~AL~~TG~HcH~EA~tIA~-~L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 8 QLAELALAGTGHHCHQEAASIAD-WLAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHH-HHHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHccchHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 34445555556667777755544 3444444 3344455677888999999886
No 388
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=25.41 E-value=5.8e+02 Score=27.57 Aligned_cols=87 Identities=11% Similarity=-0.031 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHHHHhc----CCh----HHHHHHHHHHhh-cCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 258 SLRKTKSQIFTNSSACKLKL----GDL----KGALLDTEFAMR-DGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 258 ~~~~~~~~~~~nla~~~~~l----~~~----~~Al~~~~~al~-~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
+.......+++..|.++.++ ... ++-.+.|.+.++ .++.+.|+..-...-...+++|-.|++++.+.++-.
T Consensus 1235 ~~k~~l~~al~~k~~ala~~~~~~~~~~~~~~~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k 1314 (1354)
T 3lxu_X 1235 KQKNTLIEALSKKGIAVAKLAVLDDCIKDSLAEINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEK 1314 (1354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSGGGHHHHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhcccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33445556666655554443 222 222334444454 466777777655555567899999999999999988
Q ss_pred CCCHHHHHHHHHHHHHH
Q 018098 329 PNDGGIKKELAVAKKKI 345 (361)
Q Consensus 329 P~~~~~~~~l~~~~~~~ 345 (361)
| ..+....+.++...+
T Consensus 1315 ~-~~~~~~~~~~~~~~l 1330 (1354)
T 3lxu_X 1315 R-TRDHFVELAAINGAL 1330 (1354)
T ss_dssp C-CHHHHHHHHHHHHHH
T ss_pred c-cHHHHHHHHHHHHHc
Confidence 6 556666666665554
No 389
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=31.16 E-value=15 Score=36.56 Aligned_cols=52 Identities=15% Similarity=0.033 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHH
Q 018098 266 IFTNSSACKLKLGDLKGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAA 317 (361)
Q Consensus 266 ~~~nla~~~~~l~~~~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A 317 (361)
....+|...+..|+|.-|.+.++.++..+|+|..|...+|.+|.++|...+.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 4556777778899999999999999999999999999999999999976654
No 390
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=25.03 E-value=96 Score=24.18 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHhhcC
Q 018098 263 KSQIFTNSSACKLKLGDLKGALLDTEFAMRDG 294 (361)
Q Consensus 263 ~~~~~~nla~~~~~l~~~~~Al~~~~~al~~~ 294 (361)
.+..+..+|.+|-++|+-.+|-+...+|.+..
T Consensus 124 ~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 124 SASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 36788999999999999999999888887654
No 391
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=24.98 E-value=71 Score=30.09 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHhh
Q 018098 262 TKSQIFTNSSACKLKLGDLKGALLDTEFAMR 292 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~~Al~~~~~al~ 292 (361)
....++.-+|.+|+.+++|++|+..+++++.
T Consensus 178 tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 178 TQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3446788899999999999999999999984
No 392
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=24.94 E-value=1.7e+02 Score=22.16 Aligned_cols=38 Identities=3% Similarity=0.007 Sum_probs=31.5
Q ss_pred HHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc
Q 018098 208 WMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (361)
Q Consensus 208 ~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~ 245 (361)
.++.+......+..+...|+++++.....||++++..+
T Consensus 32 Lydgal~~l~~A~~ai~~~d~~~k~~~i~KA~~Ii~~L 69 (131)
T 3iqc_A 32 LYEGILRFSSQAKRCIENEDIEKKIYYINRVTDIFTEL 69 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 34467778888888899999999999999999987654
No 393
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=24.81 E-value=1.6e+02 Score=22.65 Aligned_cols=39 Identities=10% Similarity=0.030 Sum_probs=31.7
Q ss_pred HHHhhhHHHHHhcchhHHhhhHHHHHHHHHHHHhhhccc
Q 018098 207 WWMNAVDSIKVFGNEHYKKQDYKMALRKYRKALRYLDIC 245 (361)
Q Consensus 207 ~~~~~a~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~ 245 (361)
-.++.+......+..+...|+++++-....||++++..+
T Consensus 28 mLydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL 66 (145)
T 1vh6_A 28 MLYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQEL 66 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 444567788888888999999999999999999977543
No 394
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=23.77 E-value=3.5e+02 Score=24.46 Aligned_cols=102 Identities=13% Similarity=-0.045 Sum_probs=59.2
Q ss_pred HhhhHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHhhc-------CCC
Q 018098 224 KKQDYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDLKGALLDTEFAMRD-------GDD 296 (361)
Q Consensus 224 ~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al~~-------~p~ 296 (361)
...+.++|++..++.................. .........+....+..|+..++..+|....+++-.+ +|.
T Consensus 88 ~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~-~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~ 166 (393)
T 4b4t_O 88 DSKDFDESLKYLDDLKAQFQELDSKKQRNNGS-KDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLR 166 (393)
T ss_dssp HTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCS-SSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSH
T ss_pred hcCCHHHHHHHHHHHHHHHhhhhhhhhcccch-hhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHH
Confidence 45678888888877655332211111000000 0011123345667788899999999998888777632 221
Q ss_pred c-hhhHhHHHHHHHhcCCHHHHHHHHHHHHH
Q 018098 297 N-VKALFRQGQAYMALNDVDAAVESFEKALK 326 (361)
Q Consensus 297 ~-~ka~~~~a~a~~~l~~~~~A~~~~~~al~ 326 (361)
. .+.|...+..+...++|.++..+.-.++.
T Consensus 167 v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 167 ITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 1 33444456667778898888777666665
No 395
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=22.34 E-value=5e+02 Score=24.55 Aligned_cols=93 Identities=14% Similarity=0.079 Sum_probs=51.2
Q ss_pred chHHHHhhhHHHHHhc--chhHHhh-hHHHHHHHHHHHHhhhccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCCh
Q 018098 204 ELSWWMNAVDSIKVFG--NEHYKKQ-DYKMALRKYRKALRYLDICWEKEGIDEGKSSSLRKTKSQIFTNSSACKLKLGDL 280 (361)
Q Consensus 204 ~~~~~~~~a~~~~~~G--~~~~~~g-~y~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~l~~~ 280 (361)
++.++...|+.++.++ +.--+.- --++|+++|++|+.+++.+... -++.....+.+++.-|...|+
T Consensus 421 sL~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~t----------dd~~~v~~~~~~ak~yE~aGD- 489 (526)
T 2wb7_A 421 SLQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQ----------DDYQMFLNYLNAAKKHEMAGD- 489 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTC----------CSHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhcc----------CCHHHHHHHHHHhhhhhhccH-
Confidence 3445555666666665 2222222 3456888899988877654211 234445555666555433333
Q ss_pred HHHHHHHHHHhhcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHh
Q 018098 281 KGALLDTEFAMRDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKL 327 (361)
Q Consensus 281 ~~Al~~~~~al~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 327 (361)
+|..|--....|+.++|..+-++|-++
T Consensus 490 --------------------yy~~AA~k~~yG~~eqAe~l~~~A~~~ 516 (526)
T 2wb7_A 490 --------------------YYVNAARKALNGDLEQAKIDAEKAKEY 516 (526)
T ss_dssp --------------------HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHhcCccHHHHHHHHHHHHH
Confidence 233333344567777777776666554
No 396
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=22.15 E-value=1.9e+02 Score=26.87 Aligned_cols=96 Identities=11% Similarity=0.032 Sum_probs=50.7
Q ss_pred HHHHHhcchhHHhhhHHHHHHHHHHHHhhhccccccCCCCccc-------hhHHHHHHHHHHHHHHHHHHhcCChHHHHH
Q 018098 213 DSIKVFGNEHYKKQDYKMALRKYRKALRYLDICWEKEGIDEGK-------SSSLRKTKSQIFTNSSACKLKLGDLKGALL 285 (361)
Q Consensus 213 ~~~~~~G~~~~~~g~y~~A~~~y~~al~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~nla~~~~~l~~~~~Al~ 285 (361)
.-+..+++.+.+.++|-+|--++.....++. |......+.. ..+.......++...+..+.+-+.|+.|+.
T Consensus 36 ~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~--w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~ 113 (436)
T 2yin_A 36 RYLYKLRDLHLDCDNYTEAAYTLLLHTWLLK--WSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAIS 113 (436)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCC--SSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHhC--CCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 3345668888899999999988865555432 2221111100 000111222344444555555567888888
Q ss_pred HHHHHhhcCCCchhhHhHHHHHHHh
Q 018098 286 DTEFAMRDGDDNVKALFRQGQAYMA 310 (361)
Q Consensus 286 ~~~~al~~~p~~~ka~~~~a~a~~~ 310 (361)
.|..++.....+..-|-.++.++..
T Consensus 114 l~k~L~~~yE~~~~Dy~~Ls~~~~~ 138 (436)
T 2yin_A 114 LCKELAEQYEMEIFDYELLSQNLIQ 138 (436)
T ss_dssp HHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888775544333334444444444
No 397
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=22.12 E-value=2.8e+02 Score=21.55 Aligned_cols=64 Identities=8% Similarity=-0.039 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHh--hcCCCchhhHhHHHHHHHhcCCHHHHHHHHHHHHHhC
Q 018098 259 LRKTKSQIFTNSSACKLKLGDLKGALLDTEFAM--RDGDDNVKALFRQGQAYMALNDVDAAVESFEKALKLE 328 (361)
Q Consensus 259 ~~~~~~~~~~nla~~~~~l~~~~~Al~~~~~al--~~~p~~~ka~~~~a~a~~~l~~~~~A~~~~~~al~l~ 328 (361)
-++....+|...+.+. .++...|.... .+.-..+..|-..|..+...|++++|.+.|+.+++..
T Consensus 66 nD~RyLklWl~ya~~~------~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 66 NDPRFISYCLKFAEYN------SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp TCHHHHHHHHHHHTTB------SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhc------CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3555566666655442 33666666666 4556667777788999999999999999999999975
No 398
>2r17_C Vacuolar protein sorting-associated protein 35; protein transport, membrane, phosphorylation; 2.80A {Homo sapiens}
Probab=21.80 E-value=1.5e+02 Score=26.05 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHhcCChH-----H----HHHHHHHHhhcCCCchhhHhHHHHHHHh----------cCCHHHHHHHHH
Q 018098 262 TKSQIFTNSSACKLKLGDLK-----G----ALLDTEFAMRDGDDNVKALFRQGQAYMA----------LNDVDAAVESFE 322 (361)
Q Consensus 262 ~~~~~~~nla~~~~~l~~~~-----~----Al~~~~~al~~~p~~~ka~~~~a~a~~~----------l~~~~~A~~~~~ 322 (361)
....+...+.....++..+. - +..++.+.|+. |+...+.+.-+-.+.. ..+-+..+++++
T Consensus 141 ~Q~~al~~ii~tL~~~~~f~~enye~L~tk~t~~askLLKK-~dQcraV~~cshLfW~~~~~~~~~~~~rd~krVleCLq 219 (298)
T 2r17_C 141 AQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKK-PDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLK 219 (298)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHTCSSH-HHHHHHHHHTHHHHHTCBCTTTTTCBCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCHhhHHHHHHHHHHHHHhccCc-HHHHHHHHHHHHHhcCCCccccchhhccchHHHHHHHH
Confidence 34445555555555554422 1 12222333333 4556666655555432 357778888888
Q ss_pred HHHHhC
Q 018098 323 KALKLE 328 (361)
Q Consensus 323 ~al~l~ 328 (361)
|++++.
T Consensus 220 kaLkiA 225 (298)
T 2r17_C 220 KALKIA 225 (298)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888764
No 399
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=21.30 E-value=1.5e+02 Score=28.14 Aligned_cols=30 Identities=13% Similarity=0.088 Sum_probs=26.5
Q ss_pred hhhHhHHHHHHHhcCCHHHHHHHHHHHHHh
Q 018098 298 VKALFRQGQAYMALNDVDAAVESFEKALKL 327 (361)
Q Consensus 298 ~ka~~~~a~a~~~l~~~~~A~~~~~~al~l 327 (361)
.-|+..+|.+|+..++|++|++..++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457888999999999999999999999864
No 400
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=20.59 E-value=1.2e+02 Score=28.77 Aligned_cols=30 Identities=3% Similarity=-0.079 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHH------hcCChHHHHHHHHHHhh
Q 018098 263 KSQIFTNSSACKL------KLGDLKGALLDTEFAMR 292 (361)
Q Consensus 263 ~~~~~~nla~~~~------~l~~~~~Al~~~~~al~ 292 (361)
...++.-+|.+|+ ..++|++|+.+++++|.
T Consensus 187 k~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 187 QAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 3445566666665 67899999999999984
No 401
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=20.29 E-value=80 Score=24.22 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=31.4
Q ss_pred CCceEEEeecCCCCCCCcceEEecCCCCCCCC------CceEEeEEEeChHHHHHH
Q 018098 101 ERKGMLSMANAGPNTNGSQFFITTTRTSHLDG------KHVVFGRVIKGMGVVRSI 150 (361)
Q Consensus 101 ~~~g~l~~~~~~~~~~~sqF~I~~~~~~~ld~------~~~vfG~V~~g~~vl~~i 150 (361)
..+|-|++.-. +.-|.|..++.|...+ .-.++|+|.+|++.+..+
T Consensus 73 ~~~GDIaYw~p-----gg~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 73 VEIGDVGYWPP-----GKALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp BCTTEEEEEGG-----GTEEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGC
T ss_pred CCCCcEEEeCC-----CCEEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhC
Confidence 35688888754 3458888887754332 368899999998766543
Done!