BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018100
(361 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 179/304 (58%), Gaps = 6/304 (1%)
Query: 10 ASEDGASDQITAQTLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR 69
A ED + + REL A+ NF ++++LG GGFG+VYKG L VA+K+L
Sbjct: 14 AEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKE 72
Query: 70 NGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 128
QG +F EV M+S+ H NL+ L G+C +RLLVY YM GSV L +
Sbjct: 73 ERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES 132
Query: 129 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG 188
+ PLDW R +IA G+ARGL YLHD P +I+RD+K +NILLD + + DFGLAKL
Sbjct: 133 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 192
Query: 189 PVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAE 248
D HV V GT G+ APEY TG+ + K+DV+ +GV+LLE+++G++A D ++ A +
Sbjct: 193 DYKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 251
Query: 249 QS--LVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADV 306
L+ W + L +++ +L+ D +LQG Y Q + VA +C P RP +++V
Sbjct: 252 DDVMLLDWVKGLLKEKKLEALV-DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
Query: 307 VTAL 310
V L
Sbjct: 311 VRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 221 bits (563), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 178/304 (58%), Gaps = 6/304 (1%)
Query: 10 ASEDGASDQITAQTLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR 69
A ED + + REL A+ NF ++++LG GGFG+VYKG L VA+K+L
Sbjct: 6 AEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKE 64
Query: 70 NGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG 128
QG +F EV M+S+ H NL+ L G+C +RLLVY YM GSV L +
Sbjct: 65 ERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPES 124
Query: 129 KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG 188
+ PLDW R +IA G+ARGL YLHD P +I+RD+K +NILLD + + DFGLAKL
Sbjct: 125 QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 184
Query: 189 PVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAE 248
D HV V G G+ APEY TG+ + K+DV+ +GV+LLE+++G++A D ++ A +
Sbjct: 185 DYKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND 243
Query: 249 QS--LVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADV 306
L+ W + L +++ +L+ D +LQG Y Q + VA +C P RP +++V
Sbjct: 244 DDVMLLDWVKGLLKEKKLEALV-DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 307 VTAL 310
V L
Sbjct: 303 VRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 196 bits (498), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 160/285 (56%), Gaps = 5/285 (1%)
Query: 28 ELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSL 87
+L AT NF + L+G G FG+VYKG L VA+K+ QG EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
HP+LV+LIG+C + ++ +L+Y+YM G+++ HL+ + W R++I GAARG
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L YLH +A +I+RD+K NILLD + PK++DFG++K G D TH+ V GT GY
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSL 267
PEY G+LT KSDVYSFGVVL E+L R A+ S +L WA + +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE-SHNNGQLEQ 267
Query: 268 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAY 312
I DP L + P + A C+ + RP + DV+ L Y
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 159/285 (55%), Gaps = 5/285 (1%)
Query: 28 ELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSL 87
+L AT NF + L+G G FG+VYKG L VA+K+ QG EF E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
HP+LV+LIG+C + ++ +L+Y+YM G+++ HL+ + W R++I GAARG
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L YLH +A +I+RD+K NILLD + PK++DFG++K G TH+ V GT GY
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSL 267
PEY G+LT KSDVYSFGVVL E+L R A+ S +L WA + +
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVE-SHNNGQLEQ 267
Query: 268 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAY 312
I DP L + P + A C+ + RP + DV+ L Y
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 163/295 (55%), Gaps = 20/295 (6%)
Query: 22 QTLTFRELAAATKNFRSESL------LGEGGFGRVYKGYLESINQDVAIKQL----DRNG 71
+ +F EL T NF + +GEGGFG VYKGY+ N VA+K+L D
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITT 70
Query: 72 VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 131
+ ++F E+ +++ H NLV L+G+ +DGD LVY YMP GS+ D L L G P
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPP 129
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
L W+ R KIA GAA G+ +LH+ I+RD+K +NILLD + K+SDFGLA+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSL 251
T + +R++GT Y APE A G++T KSD+YSFGVVLLEI++G AVD + Q L
Sbjct: 187 AQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLL 243
Query: 252 VAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADV 306
+ + + D ++ +VA+ C+HE+ + RP I V
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/295 (38%), Positives = 162/295 (54%), Gaps = 20/295 (6%)
Query: 22 QTLTFRELAAATKNFRSESL------LGEGGFGRVYKGYLESINQDVAIKQL----DRNG 71
+ +F EL T NF + +GEGGFG VYKGY+ N VA+K+L D
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITT 70
Query: 72 VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 131
+ ++F E+ +++ H NLV L+G+ +DGD LVY YMP GS+ D L L G P
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPP 129
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
L W+ R KIA GAA G+ +LH+ I+RD+K +NILLD + K+SDFGLA+
Sbjct: 130 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 186
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSL 251
T + R++GT Y APE A G++T KSD+YSFGVVLLEI++G AVD + Q L
Sbjct: 187 AQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLL 243
Query: 252 VAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADV 306
+ + + D ++ +VA+ C+HE+ + RP I V
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 161/295 (54%), Gaps = 20/295 (6%)
Query: 22 QTLTFRELAAATKNFRSESL------LGEGGFGRVYKGYLESINQDVAIKQL----DRNG 71
+ +F EL T NF + +GEGGFG VYKGY+ N VA+K+L D
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITT 64
Query: 72 VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 131
+ ++F E+ +++ H NLV L+G+ +DGD LVY YMP GS+ D L L G P
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPP 123
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
L W+ R KIA GAA G+ +LH+ I+RD+K +NILLD + K+SDFGLA+
Sbjct: 124 LSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 180
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSL 251
+ R++GT Y APE A G++T KSD+YSFGVVLLEI++G AVD + Q L
Sbjct: 181 AQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLL 237
Query: 252 VAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADV 306
+ + + D ++ +VA+ C+HE+ + RP I V
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 157/295 (53%), Gaps = 20/295 (6%)
Query: 22 QTLTFRELAAATKNFRSESL------LGEGGFGRVYKGYLESINQDVAIKQL----DRNG 71
+ +F EL T NF + GEGGFG VYKGY+ N VA+K+L D
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN--NTTVAVKKLAAMVDITT 61
Query: 72 VQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 131
+ ++F E+ + + H NLV L+G+ +DGD LVY Y P GS+ D L L G P
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPP 120
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
L W+ R KIA GAA G+ +LH+ I+RD+K +NILLD + K+SDFGLA+
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSL 251
+R++GT Y APE A G++T KSD+YSFGVVLLEI++G AVD + Q L
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLL 234
Query: 252 VAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADV 306
+ + + D + +VA+ C+HE+ + RP I V
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 105/194 (54%), Gaps = 8/194 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR--EFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG V++ E DVA+K L R EFL EV ++ L HPN+V +G
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
+V EY+ GS+ LH S ++ LD R+ +A A+G+ YLH++ PP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
++RDLK N+L+D+ Y K+ DFGL++L S GT + APE +
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 220 KSDVYSFGVVLLEI 233
KSDVYSFGV+L E+
Sbjct: 219 KSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 10/195 (5%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR--EFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG V++ E DVA+K L R EFL EV ++ L HPN+V +G
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
+V EY+ GS+ LH S ++ LD R+ +A A+G+ YLH++ PP+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLT 218
++R+LK N+L+D+ Y K+ DFGL++L +T +S++ GT + APE +
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 219 LKSDVYSFGVVLLEI 233
KSDVYSFGV+L E+
Sbjct: 218 EKSDVYSFGVILWEL 232
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 39/296 (13%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL---DRNG----VQGNREFLVEVLM 84
A E +G+GGFG V+KG L VAIK L D G ++ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 85 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGA 144
+S L+HPN+V L G + + +V E++P G D H L P+ W+ ++++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILL-----DRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
A G+EY+ ++ PP+++RDL+ NI L + K++DFGL++ + H +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSG 185
Query: 200 VMGTYGYCAPEY--AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARP 257
++G + + APE A+ T K+D YSF ++L IL+G D ++ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------YSYGKI 236
Query: 258 LFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
F + R + P + PPR V +C P RP + +V L+ L
Sbjct: 237 KFINMIREEGLR-PTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 39/296 (13%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL---DRNG----VQGNREFLVEVLM 84
A E +G+GGFG V+KG L VAIK L D G ++ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 85 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGA 144
+S L+HPN+V L G + + +V E++P G D H L P+ W+ ++++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILL-----DRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
A G+EY+ ++ PP+++RDL+ NI L + K++DFG ++ + H +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSG 185
Query: 200 VMGTYGYCAPEY--AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARP 257
++G + + APE A+ T K+D YSF ++L IL+G D ++ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------YSYGKI 236
Query: 258 LFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
F + R + P + PPR V +C P RP + +V L+ L
Sbjct: 237 KFINMIREEGLR-PTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 39/296 (13%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL---DRNG----VQGNREFLVEVLM 84
A E +G+GGFG V+KG L VAIK L D G ++ +EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 85 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGA 144
+S L+HPN+V L G + + +V E++P G D H L P+ W+ ++++
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCG---DLYHRLLDKAHPIKWSVKLRLMLDI 131
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILL-----DRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
A G+EY+ ++ PP+++RDL+ NI L + K++DF L++ + H +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSG 185
Query: 200 VMGTYGYCAPEY--AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARP 257
++G + + APE A+ T K+D YSF ++L IL+G D ++ +
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE---------YSYGKI 236
Query: 258 LFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
F + R + P + PPR V +C P RP + +V L+ L
Sbjct: 237 KFINMIREEGLR-PTIPEDCPPR----LRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 38/313 (12%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
K E ++G G FG V K + +DVAIKQ++ + + F+VE+ LS ++HPN+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESER--KAFIVELRQLSRVNHPNI 64
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTR---MKIAAGAARGLEY 150
V L G C + LV EY GS+ + LH G +PL + T M ++G+ Y
Sbjct: 65 VKLYGACLN--PVCLVMEYAEGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
LH +I+RDLK N+LL G K+ DFG A TH+ T G+ + AP
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAP 173
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E + + K DV+S+G++L E+++ RK D A + + WA + TR LI
Sbjct: 174 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWA---VHNGTRPPLIK 228
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESDAEKVQSPC 329
+ P+ ++ C + P RP + ++V + +L + + E +Q PC
Sbjct: 229 N-------LPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLM-RYFPGADEPLQYPC 277
Query: 330 ---LDPGTPTRTK 339
L PG R +
Sbjct: 278 QHSLPPGEDGRVE 290
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 150/313 (47%), Gaps = 38/313 (12%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
K E ++G G FG V K + +DVAIKQ++ + + F+VE+ LS ++HPN+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRA--KDVAIKQIESESER--KAFIVELRQLSRVNHPNI 63
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTR---MKIAAGAARGLEY 150
V L G C + LV EY GS+ + LH G +PL + T M ++G+ Y
Sbjct: 64 VKLYGACLN--PVCLVMEYAEGGSLYNVLH----GAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
LH +I+RDLK N+LL G K+ DFG A TH+ T G+ + AP
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAP 172
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E + + K DV+S+G++L E+++ RK D A + + WA + TR LI
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR--IMWA---VHNGTRPPLIK 227
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESDAEKVQSPC 329
+ P+ ++ C + P RP + ++V + +L + + E +Q PC
Sbjct: 228 N-------LPKPIE---SLMTRCWSKDPSQRPSMEEIVKIMTHLM-RYFPGADEPLQYPC 276
Query: 330 ---LDPGTPTRTK 339
L PG R +
Sbjct: 277 QHSLPPGEDGRVE 289
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 33/215 (15%)
Query: 39 ESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLV 94
E ++G GGFG+VY+ + I +VA+K D + Q E + ++L HPN++
Sbjct: 12 EEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 95 NLIGYCADGDQRLLVYEYM---PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
L G C LV E+ PL V LS + P D + A ARG+ YL
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGGPLNRV------LSGKRIPPD--ILVNWAVQIARGMNYL 121
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHP--------KLSDFGLAKLGPVGDNTHVSTRV--M 201
HD+A P+I+RDLK SNIL+ + K++DFGLA+ H +T++
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAA 175
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
G Y + APE + + SDV+S+GV+L E+L+G
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 192 DVWAFGVLLWEI 203
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 13/214 (6%)
Query: 28 ELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLM 84
++ ++F +LG+G FG+V+ + NQ AIK L ++ V + + +VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 85 LSL-LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
LSL HP L ++ + V EY+ G + H+ D + AA
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAE 127
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
GL++LH K ++YRDLK NILLD+ H K++DFG+ K +GD + GT
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGT 182
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
Y APE + D +SFGV+L E+L G+
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 195 DVWAFGVLLWEI 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+V EYMP G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECN--REEVTAVVLLYMATQISSAMEYLEKKN---FIH 153
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE ++KS
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 213 DVWAFGVLLWEI 224
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 199 DVWAFGVLLWEI 210
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 11/208 (5%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 222 DVYSFGVVLLEI----LSGRKAVDTSKA 245
DV++FGV+L EI +S +D S+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQV 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 13/214 (6%)
Query: 28 ELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLM 84
++ ++F +LG+G FG+V+ + NQ AIK L ++ V + + +VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 85 LSL-LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
LSL HP L ++ + V EY+ G + H+ D + AA
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK----FDLSRATFYAAE 126
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
GL++LH K ++YRDLK NILLD+ H K++DFG+ K +GD + GT
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGT 181
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
Y APE + D +SFGV+L E+L G+
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 199 DVWAFGVLLWEI 210
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 199 DVWAFGVLLWEI 210
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 135
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 195 DVWAFGVLLWEI 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 192 DVWAFGVLLWEI 203
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 138
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 198 DVWAFGVLLWEI 209
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 136/335 (40%), Gaps = 44/335 (13%)
Query: 2 NSSLRVKEASEDGASDQITAQTLTFRELAAATKNFRSESL---LGEGGFGRVYKGYLESI 58
SSL E G I F + R L LGEG FG+V+ ++
Sbjct: 6 GSSLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNL 65
Query: 59 --NQD---VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYM 113
QD VA+K L ++F E +L++L H ++V G C +G L+V+EYM
Sbjct: 66 LPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125
Query: 114 PLGSVEDHL-------------HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
G + L D++PG PL + +A+ A G+ YL A +
Sbjct: 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQVAAGMVYL---AGLHFV 180
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ +G K+ DFG+++ D V R M + PE + T +
Sbjct: 181 HRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE 240
Query: 221 SDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPP 279
SDV+SFGVVL EI + G++ + R L + R PP
Sbjct: 241 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRA-------------CPP 287
Query: 280 RGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA 314
+ A+ C +P R I DV L LA
Sbjct: 288 ----EVYAIMRGCWQREPQQRHSIKDVHARLQALA 318
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 196 DVWAFGVLLWEI 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 196 DVWAFGVLLWEI 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 136
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 196 DVWAFGVLLWEI 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 192 DVWAFGVLLWEI 203
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 42 LGEGGFGRVYKGYLESI--NQD---VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V+ ++ QD VA+K L ++F E +L++L H ++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHL-------------HDLSPGKKPLDWNTRMKIAAG 143
G C +G L+V+EYM G + L D++PG PL + +A+
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 143
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
A G+ YL A ++RDL N L+ +G K+ DFG+++ D V R M
Sbjct: 144 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 200
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ PE + T +SDV+SFGVVL EI +
Sbjct: 201 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 27/275 (9%)
Query: 42 LGEGGFGRVYKGYLESINQD-VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ GY +N+D VAIK + R G +F+ E ++ L HP LV L G C
Sbjct: 15 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ LV+E+M G + D+L + T + + G+ YL + + VI
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAS---VI 125
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+ + + D ST + +PE + + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFGV++ E+ S K +++ +E + +D + + P L +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH--- 232
Query: 281 GFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
YQ + C E+P+ RP + ++ LA +A+
Sbjct: 233 -VYQ---IMNHCWKERPEDRPAFSRLLRQLAAIAA 263
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + IA ARG++YLH K+ +
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK---TGQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE + +
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 42 LGEGGFGRVYKGYLESI--NQD---VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V+ ++ QD VA+K L ++F E +L++L H ++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHL-------------HDLSPGKKPLDWNTRMKIAAG 143
G C +G L+V+EYM G + L D++PG PL + +A+
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG--PLGLGQLLAVASQ 137
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
A G+ YL A ++RDL N L+ +G K+ DFG+++ D V R M
Sbjct: 138 VAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP 194
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ PE + T +SDV+SFGVVL EI +
Sbjct: 195 IRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 139
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 199 DVWAFGVLLWEI 210
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 147
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 207 DVWAFGVLLWEI 218
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 194 DVWAFGVLLWEI 205
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 42 LGEGGFGRVYKGYLESINQD-VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ GY +N+D VAIK + R G +F+ E ++ L HP LV L G C
Sbjct: 18 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ LV+E+M G + D+L + T + + G+ YL + VI
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 128
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+ + + D ST + +PE + + K
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFGV++ E+ S K +++ +E + +D + + P L +
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH--- 235
Query: 281 GFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA 314
YQ + C E+P+ RP + ++ LA +A
Sbjct: 236 -VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIA 265
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 42 LGEGGFGRVYKGYLESINQD-VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ GY +N+D VAIK + R G +F+ E ++ L HP LV L G C
Sbjct: 15 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ LV+E+M G + D+L + T + + G+ YL + VI
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 125
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+ + + D ST + +PE + + K
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFGV++ E+ S K +++ +E + +D + + P L +
Sbjct: 185 SDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH--- 232
Query: 281 GFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA 314
YQ + C E+P+ RP + ++ LA +A
Sbjct: 233 -VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 42 LGEGGFGRVYKGYLESINQD-VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ GY +N+D VAIK + R G +F+ E ++ L HP LV L G C
Sbjct: 13 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ LV+E+M G + D+L + T + + G+ YL + VI
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 123
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+ + + D ST + +PE + + K
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFGV++ E+ S K +++ +E + +D + + P L +
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH--- 230
Query: 281 GFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA 314
YQ + C E+P+ RP + ++ LA +A
Sbjct: 231 -VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 260
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
+ Q +V ++ S+ HLH + + + IA ARG++YLH K+ +
Sbjct: 89 -STAPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK---TGQ 216
I+RDLK +NI L K+ DFGLA +H ++ G+ + APE + +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 31 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 89 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + + APE G T+K
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 247
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 248 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 280
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 27 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + + APE G T+K
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 243
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 244 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 26 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 84 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + + APE G T+K
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 242
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 243 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 275
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + + APE G T+K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 237
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 238 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + IA ARG++YLH K+ +
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK---TGQ 216
I+RDLK +NI L K+ DFGLA +H ++ G+ + APE + +
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQ 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 380
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
R+L N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 440 DVWAFGVLLWEI 451
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ ++ + +A + +EYL K I+
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKN---FIH 338
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
R+L N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 398 DVWAFGVLLWEI 409
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 16 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 74 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 127
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + + APE G T+K
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 232
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 233 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 29 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 87 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + APE G T+K
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 245
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 246 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 278
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%), Gaps = 7/192 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G +G VY+G + + VA+K L + ++ EFL E ++ + HPNLV L+G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ E+M G++ D+L + + ++ + + +A + +EYL K I+
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKN---FIH 341
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
R+L N L+ + K++DFGL++L GD + APE + ++KS
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 222 DVYSFGVVLLEI 233
DV++FGV+L EI
Sbjct: 401 DVWAFGVLLWEI 412
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + APE G T+K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 237
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 238 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 30 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 88 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + APE G T+K
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 246
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 247 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 279
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 27 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 85 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + APE G T+K
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 243
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 244 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 276
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 23 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 81 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + APE G T+K
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 239
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 240 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 272
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 22 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 80 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 133
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + APE G T+K
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 238
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 239 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 271
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%), Gaps = 17/215 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + + VA+K L + G + FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNN-STKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L GK L + +A A G+ Y+ K I+
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIH 133
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +N+L+ K++DFGLA++ + DN + + + APE G T+K
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 221 SDVYSFGVVLLEILS-------GRKAVDTSKAAAE 248
SDV+SFG++L EI++ GR D A ++
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQ 226
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ K++DFGLA+L + DN + + APE G T+K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 237
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 238 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 27/274 (9%)
Query: 42 LGEGGFGRVYKGYLESINQD-VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ GY +N+D VAIK + R G +F+ E ++ L HP LV L G C
Sbjct: 16 IGSGQFGLVHLGYW--LNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ LV E+M G + D+L + T + + G+ YL + VI
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+ + + D ST + +PE + + K
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFGV++ E+ S K +++ +E + +D + + P L +
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH--- 233
Query: 281 GFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA 314
YQ + C E+P+ RP + ++ LA +A
Sbjct: 234 -VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
+ Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 18/203 (8%)
Query: 41 LLGEGGFGRVYKGYL----ESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVN 95
+LG G FG VYKG E++ VAIK L+ G + N EF+ E L+++ + HP+LV
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 104
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLH---DLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
L+G C + LV + MP G + +++H D + L+W ++ A+G+ YL
Sbjct: 105 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 157
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
++ +++RDL N+L+ H K++DFGLA+L + + + + A E
Sbjct: 158 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
+ T +SDV+S+GV + E+++
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 17 LGAGQFGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 75 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 128
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
R+L+ +NIL+ K++DFGLA+L + DN + + + APE G T+K
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCPE 233
Query: 281 GFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 234 ELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 18 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 75 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 127
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQ 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 43 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 100 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 152
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 212
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQ 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 18/203 (8%)
Query: 41 LLGEGGFGRVYKGYL----ESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVN 95
+LG G FG VYKG E++ VAIK L+ G + N EF+ E L+++ + HP+LV
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLH---DLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
L+G C + LV + MP G + +++H D + L+W ++ A+G+ YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
++ +++RDL N+L+ H K++DFGLA+L + + + + A E
Sbjct: 135 ERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
+ T +SDV+S+GV + E+++
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 21 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 78 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 130
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQ 211
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 27/274 (9%)
Query: 42 LGEGGFGRVYKGYLESINQD-VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ GY +N+D VAIK + + G +F+ E ++ L HP LV L G C
Sbjct: 35 IGSGQFGLVHLGYW--LNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ LV+E+M G + D+L + T + + G+ YL + VI
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC---VI 145
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+ + + D ST + +PE + + K
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
SDV+SFGV++ E+ S K +++ +E + +D + + P L +
Sbjct: 205 SDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH--- 252
Query: 281 GFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA 314
YQ + C E+P+ RP + ++ LA +A
Sbjct: 253 -VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 282
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 104/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA + +H ++ G+ + APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV---EVLMLSLL 88
+ ++F+ LG G FGRV+ + A+K L + V ++ E LMLS++
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 89 HHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
HP ++ + G D Q ++ +Y+ G + L P+ AA L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV----AKFYAAEVCLAL 119
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
EYLH K +IYRDLK NILLD+ H K++DFG AK P V+ + GT Y A
Sbjct: 120 EYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXLCGTPDYIA 171
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILSG 236
PE T D +SFG+++ E+L+G
Sbjct: 172 PEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
R +LG G FG V+KG ESI V IK + D++G Q + +L + L
Sbjct: 32 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP---LDWNTRMKIAAGAAR 146
H ++V L+G C G LV +Y+PLGS+ DH+ P L+W ++ A+
Sbjct: 92 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 144
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL + +++R+L N+LL +++DFG+A L P D + + +
Sbjct: 145 GMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 201
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
A E G+ T +SDV+S+GV + E+++
Sbjct: 202 MALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ G N VAIK L + G FL E ++ L H LV L +
Sbjct: 17 LGNGQFGEVWMGTWNG-NTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ + +V EYM GS+ D L D + L + +AA A G+ Y+ + I+
Sbjct: 75 E-EPIYIVTEYMNKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIE---RMNYIH 128
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +NIL+ G K++DFGLA+L + DN + + + APE A G+ T+K
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 221 SDVYSFGVVLLEILS 235
SDV+SFG++L E+++
Sbjct: 187 SDVWSFGILLTELVT 201
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYL--ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLL-HH 90
+ + + ++GEG FG+V K + + + D AIK++ + + R+F E+ +L L HH
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 85
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLH-----DLSPG-------KKPLDWNTRM 138
PN++NL+G C L EY P G++ D L + P L +
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 145
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
AA ARG++YL K I+RDL NIL+ Y K++DFGL++ G +V
Sbjct: 146 HFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK- 197
Query: 199 RVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ MG + A E T SDV+S+GV+L EI+S
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 18/209 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
R +LG G FG V+KG ESI V IK + D++G Q + +L + L
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP---LDWNTRMKIAAGAAR 146
H ++V L+G C G LV +Y+PLGS+ DH+ P L+W ++ A+
Sbjct: 74 HAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AK 126
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL + +++R+L N+LL +++DFG+A L P D + + +
Sbjct: 127 GMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW 183
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
A E G+ T +SDV+S+GV + E+++
Sbjct: 184 MALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYL--ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLL-HH 90
+ + + ++GEG FG+V K + + + D AIK++ + + R+F E+ +L L HH
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 75
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLH-----DLSPG-------KKPLDWNTRM 138
PN++NL+G C L EY P G++ D L + P L +
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 135
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
AA ARG++YL K I+RDL NIL+ Y K++DFGL++ G +V
Sbjct: 136 HFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK- 187
Query: 199 RVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ MG + A E T SDV+S+GV+L EI+S
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPESLT 190
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 138/286 (48%), Gaps = 37/286 (12%)
Query: 41 LLGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
++G G FG VY G L ++ D A+K L+R G +FL E +++ HPN++
Sbjct: 38 VIGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 95 NLIGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYL 151
+L+G C + L+V YM G + + + + + P K L + A+G+++L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 150
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 209
A ++RDL N +LD + K++DFGLA+ L D+ H T + A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQG 254
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 255 RRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 166 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 221
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 134 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 189
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 141 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 196
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 133 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 188
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 139 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 194
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 140 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 195
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 190
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 106/215 (49%), Gaps = 17/215 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V+ GY + + VA+K L + G + FL E ++ L H LV L
Sbjct: 20 LGAGQFGEVWMGYYNN-STKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ E+M GS+ D L GK L + +A A G+ Y+ K I+
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYAKTGQLTLK 220
RDL+ +N+L+ K++DFGLA++ + DN + + + APE G T+K
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 221 SDVYSFGVVLLEILS-------GRKAVDTSKAAAE 248
S+V+SFG++L EI++ GR D A ++
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQ 225
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 142 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 197
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 34 KNFRSESLLGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
++ + S LG+G FG V Y ++ VA+KQL +G R+F E+ +L LH
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 69
Query: 90 HPNLVNLIGYC-ADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+V G G Q L LV EY+P G + D L + LD + + ++ +G
Sbjct: 70 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKG 126
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 204
+EYL + ++RDL NIL++ H K++DFGLAKL P+ + +V R G +
Sbjct: 127 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIF 182
Query: 205 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
Y APE + +SDV+SFGVVL E+ +
Sbjct: 183 WY-APESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 190
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 34 KNFRSESLLGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
++ + S LG+G FG V Y ++ VA+KQL +G R+F E+ +L LH
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 70
Query: 90 HPNLVNLIGYC-ADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+V G G Q L LV EY+P G + D L + LD + + ++ +G
Sbjct: 71 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKG 127
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 204
+EYL + ++RDL NIL++ H K++DFGLAKL P+ + +V R G +
Sbjct: 128 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIF 183
Query: 205 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
Y APE + +SDV+SFGVVL E+ +
Sbjct: 184 WY-APESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 36 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 93 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 145
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA +H ++ G+ + APE +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 205
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQ 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 73 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 125
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA +H ++ G+ + APE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQ 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 109/211 (51%), Gaps = 17/211 (8%)
Query: 34 KNFRSESLLGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
++ + S LG+G FG V Y ++ VA+KQL +G R+F E+ +L LH
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82
Query: 90 HPNLVNLIGYC-ADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+V G G Q L LV EY+P G + D L + LD + + ++ +G
Sbjct: 83 SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKG 139
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 204
+EYL + ++RDL NIL++ H K++DFGLAKL P+ + +V R G +
Sbjct: 140 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYV-VREPGQSPIF 195
Query: 205 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
Y APE + +SDV+SFGVVL E+ +
Sbjct: 196 WY-APESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV--QGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG VYKG DVA+K L+ Q + F EV +L H N++ +GY
Sbjct: 44 IGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
Q +V ++ S+ HLH + + + + IA A+G++YLH K+ +
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKS---I 153
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT---GQ 216
I+RDLK +NI L K+ DFGLA +H ++ G+ + APE +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 213
Query: 217 LTLKSDVYSFGVVLLEILSGR 237
+ +SDVY+FG+VL E+++G+
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQ 234
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 208
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 208
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 42 LGEGGFGRVY--KGYLESINQD---VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V+ + Y S +D VA+K L + ++F E +L+ L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSP------------GKKPLDWNTRMKIAAGA 144
G C DGD ++V+EYM G + L P K L + + IA+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY 204
A G+ YL A ++RDL N L+ K+ DFG+++ D V M
Sbjct: 143 ASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 205 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ PE + T +SDV+SFGV+L EI +
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L K+ +D ++ + +G+EYL K
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+R+L NIL++ K+ DFGL K+ P D + + G + APE
Sbjct: 136 ---YIHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYYKVKEPGESPIFWYAPESLT 191
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%), Gaps = 26/219 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYL--ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLL-HH 90
+ + + ++GEG FG+V K + + + D AIK++ + + R+F E+ +L L HH
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLH-----DLSPG-------KKPLDWNTRM 138
PN++NL+G C L EY P G++ D L + P L +
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL 142
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
AA ARG++YL K I+R+L NIL+ Y K++DFGL++ G +V
Sbjct: 143 HFAADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK- 194
Query: 199 RVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ MG + A E T SDV+S+GV+L EI+S
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 37/284 (13%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E K G T SD++SFGVVL EI S AEQ +Q + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSNEQVLK 243
Query: 270 DPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ G Y P + + MC P+MRP ++V L
Sbjct: 244 F-VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G VYK + Q VAIKQ+ V+ + +E + E+ ++ P++V G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVP---VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+V EY GSV D + + K L + I +GLEYLH K I
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFMRK---I 147
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K NILL+ H KL+DFG+A G + D V+GT + APE +
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCV 205
Query: 221 SDVYSFGVVLLEILSGR 237
+D++S G+ +E+ G+
Sbjct: 206 ADIWSLGITAIEMAEGK 222
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G+++L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-- 150
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
A ++RDL N +LD + K++DFGLA+ D+ H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 256
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 257 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G+++L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-- 147
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
A ++RDL N +LD + K++DFGLA+ D+ H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 253
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 254 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 137/286 (47%), Gaps = 37/286 (12%)
Query: 41 LLGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
++G G FG VY G L ++ D A+K L+R G +FL E +++ HPN++
Sbjct: 96 VIGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 95 NLIGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYL 151
+L+G C + L+V YM G + + + + + P K L + A+G+++L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL 208
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAP 209
K ++RDL N +LD + K++DFGLA+ D+ H T + A
Sbjct: 209 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQG 312
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 313 RRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 355
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 17/211 (8%)
Query: 34 KNFRSESLLGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
++ + S LG+G FG V Y ++ VA+KQL +G R+F E+ +L LH
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 66
Query: 90 HPNLVNL--IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+V + Y + LV EY+P G + D L + LD + + ++ +G
Sbjct: 67 SDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKG 123
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 204
+EYL + ++RDL NIL++ H K++DFGLAKL P+ + V R G +
Sbjct: 124 MEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXV-VREPGQSPIF 179
Query: 205 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
Y APE + +SDV+SFGVVL E+ +
Sbjct: 180 WY-APESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 151
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
K ++RDL N +LD + K++DFGLA+ D+ H T + A E
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 255
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 256 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G+++L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFLAS 156
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
K ++RDL N +LD + K++DFGLA+ D+ H T + A E
Sbjct: 157 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 260
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 261 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 301
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 135/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G+++L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKFL-- 149
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
A ++RDL N +LD + K++DFGLA+ D+ H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 255
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 256 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G G V+ GY + VA+K L + G FL E ++ L H LV L
Sbjct: 21 LGAGQAGEVWMGYYNG-HTKVAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ EYM GS+ D L +P L N + +AA A G+ ++ ++ I+
Sbjct: 79 Q-EPIYIITEYMENGSLVDFLK--TPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTL 219
RDL+ +NIL+ K++DFGLA+L ++ + R + + APE G T+
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 220 KSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPP 279
KSDV+SFG++L EI++ + E + Q+ R + P+ P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPE---------VIQNLERGYRMVRPD----NCP 236
Query: 280 RGFYQALAVAAMCVHEQPDMRP-------VIADVVTA 309
YQ + +C E+P+ RP V+ D TA
Sbjct: 237 EELYQLM---RLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 98/211 (46%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 120
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T +S GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDY 173
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ EY+P GS+ D+L + +D ++ + +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---AHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E K G T SD++SFGVVL EI S AEQ +Q + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSNEQVLK 243
Query: 270 DPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ G Y P + + MC P MRP ++V L
Sbjct: 244 F-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 142 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E K G T SD++SFGVVL EI S AEQ +Q + ++
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSNEQVLK 240
Query: 270 DPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ G Y P + + MC P MRP ++V L
Sbjct: 241 FV-MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 324
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + +AA A G+ Y+
Sbjct: 325 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE- 380
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 381 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 436
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTT 459
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 145
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 198
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 15/202 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG+G FG V Y ++ + VA+K+L + + R+F E+ +L L H N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 98 GYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
G C +R L+ E++P GS+ ++L K+ +D ++ + +G+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGYCAPEYAK 213
I+RDL NIL++ K+ DFGL K+ P D + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 214 TGQLTLKSDVYSFGVVLLEILS 235
+ ++ SDV+SFGVVL E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 240
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 241 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 244
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 245 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 287
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 150
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
K ++RDL N +LD + K++DFGLA+ + H T + A E
Sbjct: 151 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 254
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 255 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 242
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 243 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 285
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + +AA A G+ Y+
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 298 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 353
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 243
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 244 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 286
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 129
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 130 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + +AA A G+ Y+
Sbjct: 242 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 298 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 353
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 15/227 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQ--DVAIKQLDRNGVQGN---REFLVEVLMLSLL 88
++F+ +LLG+G F VY+ ESI+ +VAIK +D+ + + EV + L
Sbjct: 11 EDFKVGNLLGKGSFAGVYRA--ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 89 HHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
HP+++ L Y D + LV E G + +L + KP N G+
Sbjct: 69 KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGM 125
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
YLH +++RDL SN+LL R + K++DFGLA + H + + GT Y +
Sbjct: 126 LYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYIS 180
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWA 255
PE A L+SDV+S G + +L GR DT + V A
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 86 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 138
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 139 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 242
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 242
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 243 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 285
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 135/294 (45%), Gaps = 38/294 (12%)
Query: 36 FRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLHH 90
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ + +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAARG 147
P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+G
Sbjct: 102 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 154
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 155 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHS 266
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ------ 265
Query: 267 LIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 266 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 308
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 68
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + +AA A G+ Y+
Sbjct: 69 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE- 124
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 125 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 180
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTT 203
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 243
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 244 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 286
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 80
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 136
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 137 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 189
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 240
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 241 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 131
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 132 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 247
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 248 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 290
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 82 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 134
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 135 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 238
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 70 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 122
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 123 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 66
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 67 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 122
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 123 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 178
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTT 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 241
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + +AA A G+ Y+
Sbjct: 242 VQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE- 297
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 298 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 353
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTT 376
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 120
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 173
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 65
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + +AA A G+ Y+
Sbjct: 66 VQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE- 121
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + APE A
Sbjct: 122 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAA 177
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTT 200
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 64
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 65 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 120
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 121 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 176
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTT 199
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVCEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDY 177
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 144 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E K G T SD++SFGVVL EI S AEQ +Q + ++
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSNEQVLK 242
Query: 270 DPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ G Y P + + MC P MRP ++V L
Sbjct: 243 FV-MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 67
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 123
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 176
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ K ++RDL N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E K G T SD++SFGVVL EI S AEQ +Q + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSNEQVLK 243
Query: 270 DPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ G Y P + + MC P MRP ++V L
Sbjct: 244 F-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A
Sbjct: 73 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AE 125
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 126 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 229
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 143
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYCAP 209
K ++RDL N +LD + K++DFGLA+ + D + H T + A
Sbjct: 144 KK---FVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQG 245
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 246 RRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 288
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 112/220 (50%), Gaps = 23/220 (10%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V Y + + VA+K L + G Q + E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 97 IGYCAD-GDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C D G++ L LV EY+PLGS+ D+L S G L + A G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHSQ 136
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 211
I+R+L N+LLD K+ DFGLAK P G + + R G + Y APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APEC 191
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSL 251
K + SDV+SFGV L E+L+ D+S++ + L
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFL 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 151
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYCAP 209
K ++RDL N +LD + K++DFGLA+ + D + H T + A
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQG 253
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 254 RRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 62
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 118
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 171
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 175
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 41 LLGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
++G G FG VY G L ++ D A+K L+R G +FL E +++ HPN++
Sbjct: 55 VIGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 95 NLIGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYL 151
+L+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 167
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYC 207
K ++RDL N +LD + K++DFGLA+ + D + H T +
Sbjct: 168 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 222
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSL 267
A E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLL 269
Query: 268 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 270 QGRRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 314
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + ++A A G+ Y+
Sbjct: 73 VQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGET--GKYLRLPQLVDMSAQIASGMAYVE- 128
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 129 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 184
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTT 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ + H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 149
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYCAP 209
K ++RDL N +LD + K++DFGLA+ + D + H T + A
Sbjct: 150 KK---FVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQG 251
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 252 RRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 41/288 (14%)
Query: 41 LLGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
++G G FG VY G L ++ D A+K L+R G +FL E +++ HPN++
Sbjct: 56 VIGRGHFGCVYHGTL--LDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 95 NLIGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYL 151
+L+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYL 168
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYC 207
K ++RDL N +LD + K++DFGLA+ + D + H T +
Sbjct: 169 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWM 223
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSL 267
A E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLL 270
Query: 268 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 271 QGRRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 315
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 148
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYCAP 209
K ++RDL N +LD + K++DFGLA+ + D + H T + A
Sbjct: 149 KK---FVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQG 250
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 251 RRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 293
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 132 --RMNYVHRDLAAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 146
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
K ++RDL N +LD + K++DFGLA+ + H T + A E
Sbjct: 147 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 250
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 251 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 291
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 134/284 (47%), Gaps = 33/284 (11%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 150
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEY 211
K ++RDL N +LD + K++DFGLA+ + H T + A E
Sbjct: 151 KK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
+T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQGRR 254
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 255 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 136/286 (47%), Gaps = 37/286 (12%)
Query: 41 LLGEGGFGRVYKGYL---ESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNL 96
++G G FG VY G L + A+K L+R G +FL E +++ HPN+++L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 97 IGYCADGD-QRLLVYEYMPLGSVEDHLHDLS--PGKKPLDWNTRMKIAAGAARGLEYLHD 153
+G C + L+V YM G + + + + + P K L + A+G++YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGMKYLAS 151
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD----NTHVSTRVMGTYGYCAP 209
K ++RDL N +LD + K++DFGLA+ + D + H T + A
Sbjct: 152 KK---FVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E +T + T KSDV+SFGV+L E++ T A + + D T + L
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM-------TRGAPPYPDVNTF------DITVYLLQG 253
Query: 270 DPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
LQ +Y P Y+ V C H + +MRP +++V+ ++ + S
Sbjct: 254 RRLLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVIEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + APE A
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ + E LG G FG V+ + VA+K + + G FL E ++ L H L
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 72
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L + ++ E+M GS+ D L K+PL + +A A G+ ++
Sbjct: 73 VKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ 129
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ I+RDL+ +NIL+ K++DFGLA++ + DN + + + APE
Sbjct: 130 RN---YIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAI 184
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G T+KSDV+SFG++L+EI++
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 112/220 (50%), Gaps = 23/220 (10%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V Y + + VA+K L + G Q + E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 97 IGYCAD-GDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C D G++ L LV EY+PLGS+ D+L S G L + A G+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQ 136
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 211
I+R+L N+LLD K+ DFGLAK P G + + R G + Y APE
Sbjct: 137 H---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APEC 191
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSL 251
K + SDV+SFGV L E+L+ D+S++ + L
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT---HCDSSQSPPTKFL 228
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 99/201 (49%), Gaps = 17/201 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL---DRNGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
+G G FG VYKG DVA+K L D Q + F EV +L H N++ +G
Sbjct: 44 IGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQF-QAFRNEVAVLRKTRHVNILLFMG 99
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
Y D +V ++ S+ HLH + + IA A+G++YLH K
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQGMDYLHAKN--- 152
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAK---TG 215
+I+RD+K +NI L G K+ DFGLA + + + G+ + APE +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ +SDVYS+G+VL E+++G
Sbjct: 213 PFSFQSDVYSYGIVLYELMTG 233
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 32/269 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G FG V+KG + VAIK +D + E + E+ +LS P + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ ++ EY+ GS D L PG PLD I +GL+YLH + K I
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATILREILKGLDYLHSEKK---I 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K +N+LL KL+DFG+A G + D +GT + APE K K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY--P 278
+D++S G+ +E+ G L+ P P L+G Y P
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 231
Query: 279 PRGFYQALAVAAMCVHEQPDMRPVIADVV 307
+ F +A C++++P RP +++
Sbjct: 232 LKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 32/269 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G FG V+KG + VAIK +D + E + E+ +LS P + G
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ ++ EY+ GS D L PG PLD I +GL+YLH + K I
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLL---EPG--PLDETQIATILREILKGLDYLHSEKK---I 141
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K +N+LL KL+DFG+A G + D +GT + APE K K
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY--P 278
+D++S G+ +E+ G L+ P P L+G Y P
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 246
Query: 279 PRGFYQALAVAAMCVHEQPDMRPVIADVV 307
+ F +A C++++P RP +++
Sbjct: 247 LKEFVEA------CLNKEPSFRPTAKELL 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 32/269 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G FG V+KG + VAIK +D + E + E+ +LS P + G
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ ++ EY+ GS D L PG PLD I +GL+YLH + K I
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATILREILKGLDYLHSEKK---I 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K +N+LL KL+DFG+A G + D +GT + APE K K
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY--P 278
+D++S G+ +E+ G L+ P P L+G Y P
Sbjct: 185 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 231
Query: 279 PRGFYQALAVAAMCVHEQPDMRPVIADVV 307
+ F +A C++++P RP +++
Sbjct: 232 LKEFVEA------CLNKEPSFRPTAKELL 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 60
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 116
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 169
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 125/272 (45%), Gaps = 38/272 (13%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G FG VYKG + VAIK +D + E + E+ +LS P + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ ++ EY+ GS D L PG PL+ I +GL+YLH + K I
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL---KPG--PLEETYIATILREILKGLDYLHSERK---I 138
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K +N+LL KL+DFG+A G + D +GT + APE K K
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLI---ADPELQGQY 277
+D++S G+ A++ +K S + R LF LI + P L+GQ+
Sbjct: 197 ADIWSLGIT---------AIELAKGEPPNSDLHPMRVLF-------LIPKNSPPTLEGQH 240
Query: 278 --PPRGFYQALAVAAMCVHEQPDMRPVIADVV 307
P + F +A C+++ P RP +++
Sbjct: 241 SKPFKEFVEA------CLNKDPRFRPTAKELL 266
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 32/269 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G FG V+KG + VAIK +D + E + E+ +LS P + G
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ ++ EY+ GS D L PG PLD I +GL+YLH + K I
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLE---PG--PLDETQIATILREILKGLDYLHSEKK---I 146
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K +N+LL KL+DFG+A G + D +GT + APE K K
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
Query: 221 SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY--P 278
+D++S G+ +E+ G L+ P P L+G Y P
Sbjct: 205 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKP 251
Query: 279 PRGFYQALAVAAMCVHEQPDMRPVIADVV 307
+ F +A C++++P RP +++
Sbjct: 252 LKEFVEA------CLNKEPSFRPTAKELL 274
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 37/284 (13%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ K ++R+L N ++ + K+ DFG+ + D + + + AP
Sbjct: 145 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E K G T SD++SFGVVL EI S AEQ +Q + ++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSNEQVLK 243
Query: 270 DPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ G Y P + + MC P+MRP ++V L
Sbjct: 244 F-VMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +L G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 121
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K+++FG + P T + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 174
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 24/220 (10%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 145
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGT 203
L Y H K VI+RD+K N+LL K++DFG + P S+R + GT
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-------SSRRDDLCGT 195
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
Y PE + K D++S GV+ E L G+ + +
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNL 93
++ + ++G G V Y + VAIK+++ Q + E L E+ +S HHPN+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHL-HDLSPGKKP---LDWNTRMKIAAGAARGLE 149
V+ D+ LV + + GSV D + H ++ G+ LD +T I GLE
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGY 206
YLH + I+RD+K NILL +++DFG+ A L GD T R +GT +
Sbjct: 136 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 207 CAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
APE + + K+D++SFG+ +E+ +G L P +
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP----PSLE 248
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVV 307
+ + D E+ +Y + F + + ++C+ + P+ RP A+++
Sbjct: 249 TGVQDKEMLKKY-GKSFRKMI---SLCLQKDPEKRPTAAELL 286
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 96/208 (46%), Gaps = 17/208 (8%)
Query: 42 LGEGGFGRVY--KGYLESINQD---VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V+ + Y QD VA+K L ++F E +L+ L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-------GKKP--LDWNTRMKIAAGAARG 147
G C +GD ++V+EYM G + L P G P L + + IA A G
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
+ YL A ++RDL N L+ K+ DFG+++ D V M +
Sbjct: 141 MVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILS 235
PE + T +SDV+S GVVL EI +
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 125/284 (44%), Gaps = 37/284 (13%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ K ++R+L N ++ + K+ DFG+ + D + + + AP
Sbjct: 146 YLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIA 269
E K G T SD++SFGVVL EI S AEQ +Q + ++
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSNEQVLK 244
Query: 270 DPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ G Y P + + MC P+MRP ++V L
Sbjct: 245 FV-MDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM G + D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVMEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNL 93
++ + ++G G V Y + VAIK+++ Q + E L E+ +S HHPN+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHL-HDLSPGKKP---LDWNTRMKIAAGAARGLE 149
V+ D+ LV + + GSV D + H ++ G+ LD +T I GLE
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGL-AKLGPVGDNTHVSTR--VMGTYGY 206
YLH + I+RD+K NILL +++DFG+ A L GD T R +GT +
Sbjct: 131 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 207 CAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
APE + + K+D++SFG+ +E+ +G L P +
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP----PSLE 243
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVV 307
+ + D E+ +Y + F + + ++C+ + P+ RP A+++
Sbjct: 244 TGVQDKEMLKKY-GKSFRKMI---SLCLQKDPEKRPTAAELL 281
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFG AKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 117/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 132
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFG AKL + + + +
Sbjct: 133 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAI +L + + N+E L E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 110 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 162
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 163 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 274
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 275 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 317
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V Y + + VA+K L + G Q + E+ +L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 97 IGYCAD-GDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C D G L LV EY+PLGS+ D+L S G L + A G+ YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQ 153
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM----GTYGYCAPE 210
I+RDL N+LLD K+ DFGLAK P G H RV + APE
Sbjct: 154 H---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEXYRVREDGDSPVFWYAPE 207
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILS 235
K + SDV+SFGV L E+L+
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +L G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 75
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM G + D L K L + +AA A G+ Y+
Sbjct: 76 VQLYAVVSE-EPIYIVTEYMSKGCLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 131
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + + APE A
Sbjct: 132 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAA 187
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKL 72
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L + K L + ++A A G+ Y+
Sbjct: 73 VQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGET--GKYLRLPQLVDMSAQIASGMAYVE- 128
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGLA+L + DN + + + APE A
Sbjct: 129 --RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPEAA 184
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTT 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +L G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFGLAKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L++ + MP G + D++ H + G + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFG AKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 242
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 243 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 285
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 123/273 (45%), Gaps = 33/273 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G + DVA+K + + G EF E + L HP LV G C+
Sbjct: 16 LGSGQFGVVKLGKWKG-QYDVAVKMI-KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+V EY+ G + ++L G +P + +++ G+ +L I+
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESHQ---FIH 127
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLT 218
RDL N L+DR K+SDFG+ + V D+ +VS+ +GT + APE + +
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHYFKYS 183
Query: 219 LKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY 277
KSDV++FG+++ E+ S G+ D + V+ L+ R L +D Q Y
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLY----RPHLASDTIYQIMY 239
Query: 278 PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
C HE P+ RP +++++
Sbjct: 240 S-------------CWHELPEKRPTFQQLLSSI 259
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 135
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFG AKL + + + +
Sbjct: 136 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 247
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 248 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 290
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ + E LG G FG V+ + VA+K + + G FL E ++ L H L
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 245
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L + ++ E+M GS+ D L K+PL + +A A G+ ++
Sbjct: 246 VKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ 302
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ I+RDL+ +NIL+ K++DFGLA++ + DN + + + APE
Sbjct: 303 RN---YIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAI 357
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G T+KSDV+SFG++L+EI++
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 38/295 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 128
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFG AKL + + + +
Sbjct: 129 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRH 265
A E T +SDV+S+GV + E+++ G K D A+ S++ L Q
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ----- 240
Query: 266 SLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLA--SQKY 318
PP + C D RP +++ + +A Q+Y
Sbjct: 241 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYL----ESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLH 89
F+ +LG G FG VYKG E + VAIK+L + + N+E L E +++ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKK-PLDWNTRMKIAAGAAR 146
+P++ L+G C +L+ + MP G + D++ H + G + L+W ++ A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AK 130
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
G+ YL D+ +++RDL N+L+ H K++DFG AKL + + + +
Sbjct: 131 GMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
A E T +SDV+S+GV + E+++ G K D A+ S++
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 125/289 (43%), Gaps = 47/289 (16%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G I VA+K ++ + R EFL E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL------SPGKKPLDWNTRMKIAAGAARGLE 149
L+G + G L+V E M G ++ +L L +PG+ P +++AA A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG---- 205
YL+ K ++RDL N ++ + K+ DFG+ + D + G G
Sbjct: 145 YLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLLPV 196
Query: 206 -YCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTR 264
+ APE K G T SD++SFGVVL EI S AEQ +Q +
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQP--------YQGLSN 238
Query: 265 HSLIADPELQGQY---PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
++ + G Y P + + MC P MRP ++V L
Sbjct: 239 EQVLKF-VMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 121
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 174
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K+++FG + P T + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDY 175
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY ++ +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 120 ALSYCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 175
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 175
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 24/214 (11%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 120
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGT 203
L Y H K VI+RD+K N+LL K++DFG + P S+R + GT
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-------SSRRDTLCGT 170
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
Y PE + K D++S GV+ E L G+
Sbjct: 171 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY P G V L LS D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITELAN 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDY 177
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
PE + K D++S GV+ E L G+
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 119
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
Query: 42 LGEGGFGRVYKGYLESI-----NQDVAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
+GEG FGRV++ + VA+K L + +F E +++ +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDL--------------------SPGKKPLDWN 135
L+G CA G L++EYM G + + L + SPG PL
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 136 TRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGD--- 192
++ IA A G+ YL ++ ++RDL N L+ K++DFGL++ D
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 193 ---NTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
N + R M PE + T +SDV+++GVVL EI S
Sbjct: 232 ADGNDAIPIRWM------PPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 138 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ G L + N VA+K + +FL E +L HPN+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
Q+ +Y M L D L L L T +++ AA G+EYL K I
Sbjct: 182 T---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+++ G + APE G+ + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 221 SDVYSFGVVLLEILS 235
SDV+SFG++L E S
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ R E LG+G FG V+ G + VAIK L + G FL E ++ L H L
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKL 242
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L ++ + +V EYM GS+ D L K L + +AA A G+ Y+
Sbjct: 243 VQLYAVVSE-EPIYIVTEYMSKGSLLDFLK--GEMGKYLRLPQLVDMAAQIASGMAYVE- 298
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAPEYA 212
+ ++RDL+ +NIL+ K++DFGL +L + DN + + + + APE A
Sbjct: 299 --RMNYVHRDLRAANILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAA 354
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
G+ T+KSDV+SFG++L E+ +
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTT 377
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY PLG+V L LS D A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELAN 122
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDY 175
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYL----ESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHH 90
R +LG G FG VYKG E++ VAIK L N + N+E L E +++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P + L+G C +L V + MP G + DH+ + + L + A+G+ Y
Sbjct: 79 PYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRE---NRGRLGSQDLLNWCMQIAKGMSY 134
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
L D +++RDL N+L+ H K++DFGLA+L + + + + + A E
Sbjct: 135 LEDVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILS-GRKAVD 241
+ T +SDV+S+GV + E+++ G K D
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 114/257 (44%), Gaps = 30/257 (11%)
Query: 6 RVKEASEDGASDQITAQTLTFRE-LAAATKNFRSESLLGEGGFGRVYKGYLESINQD--- 61
++ E+ E + I L + E N + LG G FG+V + + ++
Sbjct: 2 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 61
Query: 62 --VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 117
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G
Sbjct: 62 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 118 VEDHLH---------DLSPGK----------KPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ + L L+PG+ +PL+ + ++ A+G+ +L K
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN--- 178
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
I+RD+ N+LL G+ K+ DFGLA+ N V + APE T
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 238
Query: 219 LKSDVYSFGVVLLEILS 235
++SDV+S+G++L EI S
Sbjct: 239 VQSDVWSYGILLWEIFS 255
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYC 100
+G G FG V+ G L + N VA+K + +FL E +L HPN+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
Q+ +Y M L D L L L T +++ AA G+EYL K I
Sbjct: 182 T---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RDL N L+ K+SDFG+++ G + APE G+ + +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
Query: 221 SDVYSFGVVLLEILS 235
SDV+SFG++L E S
Sbjct: 296 SDVWSFGILLWETFS 310
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LG+G FG VY +A+K QL++ GV+ + EV + S L HPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
GY D + L+ EY PLG+V L LS D A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLS----RFDEQRTATYITELANALSYCHSKR- 132
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
VI+RD+K N+LL K++DFG + P T + GT Y PE +
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRM 186
Query: 217 LTLKSDVYSFGVVLLEILSG 236
K D++S GV+ E L G
Sbjct: 187 HDEKVDLWSLGVLCYEFLVG 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
++ + E LG G FG V+ + VA+K + + G FL E ++ L H L
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKL 239
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L + ++ E+M GS+ D L K+PL + +A A G+ ++
Sbjct: 240 VKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQ 296
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG---PVGDNTHVSTRVMGTYGYCAPE 210
+ I+RDL+ +NIL+ K++DFGLA++G P+ + APE
Sbjct: 297 RN---YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK--------------WTAPE 339
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILS 235
G T+KSDV+SFG++L+EI++
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 17/244 (6%)
Query: 6 RVKEASEDGASDQITAQTLTFRE-LAAATKNFRSESLLGEGGFGRVYKGYLESINQD--- 61
++ E+ E + I L + E N + LG G FG+V + + ++
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 76
Query: 62 --VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 117
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 118 VEDHLH-----DLSPGK-KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 171
+ + L DL +PL+ + ++ A+G+ +L K I+RD+ N+LL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLL 193
Query: 172 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 231
G+ K+ DFGLA+ N V + APE T++SDV+S+G++L
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 253
Query: 232 EILS 235
EI S
Sbjct: 254 EIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 17/244 (6%)
Query: 6 RVKEASEDGASDQITAQTLTFRE-LAAATKNFRSESLLGEGGFGRVYKGYLESINQD--- 61
++ E+ E + I L + E N + LG G FG+V + + ++
Sbjct: 9 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 68
Query: 62 --VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 117
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G
Sbjct: 69 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 118 VEDHLH-----DLSPGK-KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL 171
+ + L DL +PL+ + ++ A+G+ +L K I+RD+ N+LL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLL 185
Query: 172 DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLL 231
G+ K+ DFGLA+ N V + APE T++SDV+S+G++L
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 245
Query: 232 EILS 235
EI S
Sbjct: 246 EIFS 249
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 31/214 (14%)
Query: 38 SESLLGEGGFGRVYKGYLESINQ-----DVAIKQLDR-NGVQGNREFLVEVLMLSLLHHP 91
S+ ++G+G FG VY G E I+Q AIK L R +Q FL E L++ L+HP
Sbjct: 25 SDRVIGKGHFGVVYHG--EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHP 82
Query: 92 NLVNLIGYC--ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG--AARG 147
N++ LIG +G +L+ YM G + + SP + P + I+ G ARG
Sbjct: 83 NVLALIGIMLPPEGLPHVLL-PYMCHGDLLQFIR--SPQRNP---TVKDLISFGLQVARG 136
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK------LGPVGDNTHVSTRVM 201
+EYL A+ ++RDL N +LD + K++DFGLA+ V + H V
Sbjct: 137 MEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK 193
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T A E +T + T KSDV+SFGV+L E+L+
Sbjct: 194 WT----ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 133/311 (42%), Gaps = 44/311 (14%)
Query: 18 QITAQTLTFRELAAATKNFRSE---------SLLGEGGFGRVYKGYLESINQ---DVAIK 65
Q A+ T+ E A ++F E ++G G G V G L Q VAIK
Sbjct: 24 QFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIK 83
Query: 66 QLDRNGVQ-GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL-- 122
L + R+FL E ++ HPN++ L G G ++V EYM GS++ L
Sbjct: 84 ALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT 143
Query: 123 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDF 182
HD G+ + M GA G+ YL D ++RDL N+L+D K+SDF
Sbjct: 144 HD---GQFTIMQLVGMLRGVGA--GMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDF 195
Query: 183 GLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 241
GL++ L D + +T + APE + SDV+SFGVV+ E+L
Sbjct: 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL------- 248
Query: 242 TSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP-PRGFYQALAVAAM-CVHEQPDM 299
A+ + + T +I+ E + P P G AL + C H+
Sbjct: 249 -----------AYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQ 297
Query: 300 RPVIADVVTAL 310
RP + +V+ L
Sbjct: 298 RPRFSQIVSVL 308
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V Y + + VA+K L G Q + E+ +L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 97 IGYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C D ++ LV EY+PLGS+ D+L G L + A G+ YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQ 130
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 211
I+R L N+LLD K+ DFGLAK P G + + R G + Y APE
Sbjct: 131 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APEC 185
Query: 212 AKTGQLTLKSDVYSFGVVLLEILS 235
K + SDV+SFGV L E+L+
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLDRN-GVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V Y + + VA+K L G Q + E+ +L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 97 IGYCADGDQR--LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C D ++ LV EY+PLGS+ D+L G L + A G+ YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQ 131
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 211
I+R L N+LLD K+ DFGLAK P G + + R G + Y APE
Sbjct: 132 H---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-HEYYRVREDGDSPVFWY-APEC 186
Query: 212 AKTGQLTLKSDVYSFGVVLLEILS 235
K + SDV+SFGV L E+L+
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 26 FRELAAATKNFRSESLLGEGGFGRVYKGYLE-----SINQDVAIKQLDRNGVQG--NREF 78
+E++ + F E LGE FG+VYKG+L Q VAIK L ++ +G EF
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEF 76
Query: 79 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG---------- 128
E ++ + L HPN+V L+G +++ Y G + + L SP
Sbjct: 77 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 136
Query: 129 --KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK 186
K L+ + + A A G+EYL V+++DL N+L+ + K+SD GL +
Sbjct: 137 TVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFR 193
Query: 187 LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
D + + + APE G+ ++ SD++S+GVVL E+ S
Sbjct: 194 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P P + +++A A G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 143 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P P + +++A A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 18/217 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLS 86
A ++F LG+G FG VY + +A+K QL++ GV+ + EV + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L GY D + L+ EY P G V L LS D A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS----KFDEQRTATYITELAN 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
L Y H K VI+RD+K N+LL K++DFG + P + GT Y
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDY 177
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS 243
PE + K D++S GV+ E L G+ + +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G G VY + Q+VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
GD+ +V EY+ GS+ D + + +D + + LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 161 YRDLKCSNILLDRGYHPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
+RD+K NILL KL+DFG A++ P + + ST V GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGP 195
Query: 220 KSDVYSFGVVLLEILSG 236
K D++S G++ +E++ G
Sbjct: 196 KVDIWSLGIMAIEMIEG 212
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 108/229 (47%), Gaps = 25/229 (10%)
Query: 26 FRELAAATKNFRSESLLGEGGFGRVYKGYLE-----SINQDVAIKQLDRNGVQG--NREF 78
+E++ + F E LGE FG+VYKG+L Q VAIK L ++ +G EF
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEF 59
Query: 79 LVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG---------- 128
E ++ + L HPN+V L+G +++ Y G + + L SP
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 129 --KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK 186
K L+ + + A A G+EYL V+++DL N+L+ + K+SD GL +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 187 LGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
D + + + APE G+ ++ SD++S+GVVL E+ S
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 135/316 (42%), Gaps = 48/316 (15%)
Query: 18 QITAQTLTFRELAAATKNFRSE---------SLLGEGGFGRVYKGYLESINQ---DVAIK 65
Q A+ T+ E A ++F E ++G G G V G L Q VAIK
Sbjct: 24 QFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIK 83
Query: 66 QLDRNGVQ-GNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL-- 122
L + R+FL E ++ HPN++ L G G ++V EYM GS++ L
Sbjct: 84 ALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT 143
Query: 123 HDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDF 182
HD G+ + M GA G+ YL D ++RDL N+L+D K+SDF
Sbjct: 144 HD---GQFTIMQLVGMLRGVGA--GMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDF 195
Query: 183 GLAKLGPVGDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKA 239
GL+++ + D+ + G + APE + SDV+SFGVV+ E+L
Sbjct: 196 GLSRV--LEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVL----- 248
Query: 240 VDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYP-PRGFYQALAVAAM-CVHEQP 297
A+ + + T +I+ E + P P G AL + C H+
Sbjct: 249 -------------AYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDR 295
Query: 298 DMRPVIADVVTALAYL 313
RP + +V+ L L
Sbjct: 296 AQRPRFSQIVSVLDAL 311
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 147 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 144 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 153 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 140 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 146 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 152
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGLA++ + D+ +
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARV--LEDDPEAAYTT 207
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 21/214 (9%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+LG+G FG+ K + + +K+L R + R FL EV ++ L HPN++ IG
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ + EY+ G++ + + + P W+ R+ A A G+ YLH +I
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMD-SQYP--WSQRVSFAKDIASGMAYLHSMN---II 130
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKL------GPVG-------DNTHVSTRVMGTYGYC 207
+RDL N L+ + ++DFGLA+L P G D T V+G +
Sbjct: 131 HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWM 189
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 241
APE K DV+SFG+VL EI+ GR D
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 11/199 (5%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL---DRNGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
LG GG VY +N VAIK + R + + F EV S L H N+V++I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ D LV EY+ ++ +++ S G PL +T + G+++ HD
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIE--SHG--PLSVDTAINFTNQILDGIKHAHDMR--- 131
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
+++RD+K NIL+D K+ DFG+AK T + V+GT Y +PE AK
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQAKGEATD 190
Query: 219 LKSDVYSFGVVLLEILSGR 237
+D+YS G+VL E+L G
Sbjct: 191 ECTDIYSIGIVLYEMLVGE 209
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 114/236 (48%), Gaps = 26/236 (11%)
Query: 18 QITAQTLTFRELAAATKNF---------RSESLLGEGGFGRVYKGYLESINQD---VAIK 65
+I TF + A + F + E ++G G FG V G+L+ + VAIK
Sbjct: 8 KIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 67
Query: 66 QLDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHD 124
L + R +FL E ++ HPN+++L G +++ E+M GS++ L
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 127
Query: 125 LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGL 184
+ G+ + + + G A G++YL D ++RDL NIL++ K+SDFGL
Sbjct: 128 -NDGQFTV--IQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGL 181
Query: 185 AKLGPVGDNTHVSTRVMGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
++ + D+T T G + APE + + T SDV+S+G+V+ E++S
Sbjct: 182 SRF--LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N ++ + K+ DFG+ + D + + + +P
Sbjct: 175 YLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 152
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 153 LRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 207
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G G VY + Q+VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
GD+ +V EY+ GS+ D + + +D + + LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 161 YRDLKCSNILLDRGYHPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
+RD+K NILL KL+DFG A++ P + ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSEMVGTPYWMAPEVVTRKAYGP 195
Query: 220 KSDVYSFGVVLLEILSG 236
K D++S G++ +E++ G
Sbjct: 196 KVDIWSLGIMAIEMIEG 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 11 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 123
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 178
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 28 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 85
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 140
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 141 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 195
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 101/228 (44%), Gaps = 29/228 (12%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQ-----DVAIKQLDRNGVQGNREFLVEVL--MLS 86
+N +LG G FG+V I++ VA+K L RE L+ L M
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHD----LSPGKKPLDWNTRMK--- 139
L H N+VNL+G C L++EY G + ++L S + + R++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 140 ------------IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 187
A A+G+E+L K+ ++RDL N+L+ G K+ DFGLA+
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 188 GPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
N V + APE G T+KSDV+S+G++L EI S
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G G VY + Q+VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
GD+ +V EY+ GS+ D + + +D + + LE+LH VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VI 139
Query: 161 YRDLKCSNILLDRGYHPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
+RD+K NILL KL+DFG A++ P + ++GT + APE
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGP 196
Query: 220 KSDVYSFGVVLLEILSG 236
K D++S G++ +E++ G
Sbjct: 197 KVDIWSLGIMAIEMIEG 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 14/197 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G G VY + Q+VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
GD+ +V EY+ GS+ D + + +D + + LE+LH VI
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VI 138
Query: 161 YRDLKCSNILLDRGYHPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
+RD+K NILL KL+DFG A++ P + ++GT + APE
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITP---EQSKRSXMVGTPYWMAPEVVTRKAYGP 195
Query: 220 KSDVYSFGVVLLEILSG 236
K D++S G++ +E++ G
Sbjct: 196 KVDIWSLGIMAIEMIEG 212
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 152
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 207
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 19 ITAQTLTFRE-LAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE 77
+ AQ +R A K + +G+G FG V G + VA+K + + +
Sbjct: 5 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QA 60
Query: 78 FLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNT 136
FL E +++ L H NLV L+G + L +V EYM GS+ D+L S G+ L +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDC 118
Query: 137 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 196
+K + +EYL ++RDL N+L+ K+SDFGL K
Sbjct: 119 LLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------- 168
Query: 197 STRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
ST+ G + APE + + + KSDV+SFG++L EI S
Sbjct: 169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LG+G FG VY +A+K QL++ GV+ + EV + S L HPN++ L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHPNILRL 77
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
GY D + L+ EY PLG+V L LS D A L Y H K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLS----RFDEQRTATYITELANALSYCHSKR- 132
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAK 213
VI+RD+K N+LL K++DFG + P S+R + GT Y PE +
Sbjct: 133 --VIHRDIKPENLLLGSNGELKIADFGWSVHAP-------SSRRDTLCGTLDYLPPEMIE 183
Query: 214 TGQLTLKSDVYSFGVVLLEILSG 236
K D++S GV+ E L G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 152
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 207
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 152
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 207
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 38 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 95
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 150
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 151 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 205
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G G VY + Q+VAI+Q++ Q +E ++ E+L++ +PN+VN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
GD+ +V EY+ GS+ D + + +D + + LE+LH VI
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSNQ---VI 139
Query: 161 YRDLKCSNILLDRGYHPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
+R++K NILL KL+DFG A++ P + + ST V GT + APE
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGP 196
Query: 220 KSDVYSFGVVLLEILSG 236
K D++S G++ +E++ G
Sbjct: 197 KVDIWSLGIMAIEMIEG 213
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 107/224 (47%), Gaps = 21/224 (9%)
Query: 23 TLTFRELAAA--TKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR- 76
T T E A N + ++G G FG V G L+ ++ VAIK L + R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 77 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDW 134
+FL E ++ HPN++ L G ++V EYM GS++ L HD L
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-- 149
Query: 135 NTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNT 194
+ + G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+
Sbjct: 150 ---VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDP 201
Query: 195 HVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ G + +PE + T SDV+S+G+VL E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLVN 95
LG+G FG VY+G + + +D VAIK ++ R EFL E ++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK------PLDWNTRMKIAAGAARGLE 149
L+G + G L++ E M G ++ +L L P + P + +++A A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YL+ ++RDL N + + K+ DFG+ + D + + + +P
Sbjct: 140 YLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEI 233
E K G T SDV+SFGVVL EI
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 13/204 (6%)
Query: 39 ESLLGEGGFGRVYKGYLESINQD---VAIKQLDRNGVQ-GNREFLVEVLMLSLLHHPNLV 94
E ++G G FG V +G L++ + VAIK L + REFL E ++ HPN++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
L G + +++ E+M G+++ L L+ G+ + + + G A G+ YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVI--QLVGMLRGIASGMRYL--- 134
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 211
A+ ++RDL NIL++ K+SDFGL++ + T +G + APE
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 212 AKTGQLTLKSDVYSFGVVLLEILS 235
+ T SD +S+G+V+ E++S
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 23/250 (9%)
Query: 6 RVKEASEDGASDQITAQTLTFRE-LAAATKNFRSESLLGEGGFGRVYKGYLESINQD--- 61
++ E+ E + I L + E N + LG G FG+V + + ++
Sbjct: 17 KIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAV 76
Query: 62 --VAIKQLDRNGVQGNREFLVEVL--MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGS 117
VA+K L +E L+ L M L H N+VNL+G C G L++ EY G
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 118 VEDHL---------HDLSPGKKP---LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLK 165
+ + L + +P P L + ++ A+G+ +L K I+RD+
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVA 193
Query: 166 CSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYS 225
N+LL G+ K+ DFGLA+ N V + APE T++SDV+S
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 253
Query: 226 FGVVLLEILS 235
+G++L EI S
Sbjct: 254 YGILLWEIFS 263
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 20/221 (9%)
Query: 19 ITAQTLTFRE-LAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE 77
+ AQ +R A K + +G+G FG V G + VA+K + + +
Sbjct: 177 VAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QA 232
Query: 78 FLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNT 136
FL E +++ L H NLV L+G + L +V EYM GS+ D+L S G+ L +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDC 290
Query: 137 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 196
+K + +EYL ++RDL N+L+ K+SDFGL K
Sbjct: 291 LLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS------- 340
Query: 197 STRVMGT--YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
ST+ G + APE + + + KSDV+SFG++L EI S
Sbjct: 341 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V EYM GS++ L HD L + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGM 152
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL ++ + D+ +
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRV--LEDDPEAAYTT 207
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLE---SINQDVAIKQLDRNGVQGNR-EFLVEV 82
+EL A+ + E ++G G FG V G L+ + VAIK L + R +FL E
Sbjct: 38 KELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN+V+L G G ++V E+M G+++ L HD L + +
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-----VGM 150
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G+ YL D ++RDL NIL++ K+SDFGL+++ + D+
Sbjct: 151 LRGIAAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRV--IEDDPEAVYTT 205
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + APE + + T SDV+S+G+V+ E++S
Sbjct: 206 TGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLH---------DLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L +P P L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXK 207
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 15/212 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHP 91
+F +LG+G FG+V + + AIK L ++ V + + +VE +L+LL P
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 92 NLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
+ + C RL V EY+ G + H+ + K+P + AA + GL +
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFF 135
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR-VMGTYGYCAP 209
LH + +IYRDLK N++LD H K++DFG+ K + V+TR GT Y AP
Sbjct: 136 LHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDG---VTTREFCGTPDYIAP 189
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 241
E D +++GV+L E+L+G+ D
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 13/204 (6%)
Query: 39 ESLLGEGGFGRVYKGYLESINQD---VAIKQLDRNGVQ-GNREFLVEVLMLSLLHHPNLV 94
E ++G G FG V +G L++ + VAIK L + REFL E ++ HPN++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
L G + +++ E+M G+++ L L+ G+ + + + G A G+ YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVI--QLVGMLRGIASGMRYL--- 132
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPEY 211
A+ ++RDL NIL++ K+SDFGL++ + T +G + APE
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 212 AKTGQLTLKSDVYSFGVVLLEILS 235
+ T SD +S+G+V+ E++S
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
A K + +G+G FG V G + VA+K + + + FL E +++ L
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLR 57
Query: 90 HPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
H NLV L+G + L +V EYM GS+ D+L S G+ L + +K + +
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAM 115
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GY 206
EYL ++RDL N+L+ K+SDFGL K ST+ G +
Sbjct: 116 EYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKW 165
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
APE + + + KSDV+SFG++L EI S
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG+G FG+VYK + + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ E+ G+V+ + +L ++PL + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEY-----AK 213
RDLK NIL KL+DFG++ NT R +GT + APE +K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 214 TGQLTLKSDVYSFGVVLLEI 233
K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
A K + +G+G FG V G + VA+K + + + FL E +++ L
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLR 63
Query: 90 HPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
H NLV L+G + L +V EYM GS+ D+L S G+ L + +K + +
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR--SRGRSVLGGDCLLKFSLDVCEAM 121
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT--YGY 206
EYL ++RDL N+L+ K+SDFGL K ST+ G +
Sbjct: 122 EYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKW 171
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
APE + + KSDV+SFG++L EI S
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 149 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 200
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG+G FG+VYK + + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ E+ G+V+ + +L ++PL + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEY-----AK 213
RDLK NIL KL+DFG++ NT R +GT + APE +K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 214 TGQLTLKSDVYSFGVVLLEI 233
K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG+G FG+VYK + + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+ ++ E+ G+V+ + +L ++PL + + L YLHD +I+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---IIH 158
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEY-----AK 213
RDLK NIL KL+DFG++ NT R +GT + APE +K
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 214 TGQLTLKSDVYSFGVVLLEI 233
K+DV+S G+ L+E+
Sbjct: 214 DRPYDYKADVWSLGITLIEM 233
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 13/206 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLL-HH 90
NF +LG+G FG+V ++ A+K L ++ + + + + E +LSL +H
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNH 83
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P L L D+ V E++ G + H+ + D AA L +
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMF 139
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LHDK +IYRDLK N+LLD H KL+DFG+ K G N + GT Y APE
Sbjct: 140 LHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC--NGVTTATFCGTPDYIAPE 194
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
+ D ++ GV+L E+L G
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 148 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 199
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 145 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 196
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 19/215 (8%)
Query: 28 ELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-------RNGVQGNREFLV 80
++ + K + LGEG F VYK ++ NQ VAIK++ ++G+ NR L
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGI--NRTALR 61
Query: 81 EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 140
E+ +L L HPN++ L+ LV+++M +E + D S P M +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
+GLEYLH +++RDLK +N+LLD KL+DFGLAK G
Sbjct: 121 TL---QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQ 172
Query: 201 MGTYGYCAPEYAKTGQLT-LKSDVYSFGVVLLEIL 234
+ T Y APE ++ + D+++ G +L E+L
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 129/285 (45%), Gaps = 42/285 (14%)
Query: 39 ESLLGEGGFGRVYKGYLESINQD----VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNL 93
+ ++G G FG VYKG L++ + VAIK L + R +FL E ++ H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
+ L G + +++ EYM G+++ L + L ++ G A G++YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL-- 163
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCAPE 210
A ++RDL NIL++ K+SDFGL+++ + D+ + G + APE
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV--LEDDPEATYTTSGGKIPIRWTAPE 220
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIAD 270
+ T SDV+SFG+V+ E+++ + RP + + + H ++
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGE-----------------RP-YWELSNHEVMKA 262
Query: 271 PELQGQYP-----PRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ P P YQ + C ++ RP AD+V+ L
Sbjct: 263 INDGFRLPTPMDCPSAIYQLM---MQCWQQERARRPKFADIVSIL 304
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V Y ++ + VA+K L +G + E+ +L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 97 IGYCAD--GDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C + G+ L+ E++P GS++++L K ++ ++K A +G++YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA 212
++RDL N+L++ + K+ DFGL K T R + Y APE
Sbjct: 146 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
+ + SDV+SFGV L E+L+
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNREFLVEVL--MLSL 87
N + LG G FG+V + + ++ VA+K L +E L+ L M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
H N+VNL+G C G L++ EY G D L+ L + L+ + IA A
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYG---DLLNFLRRKSRVLETDPAFAIANSTAST 163
Query: 148 LEYLHDK----------AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
+ LH A I+RD+ N+LL G+ K+ DFGLA+ N V
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 198 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T++SDV+S+G++L EI S
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 40 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 97
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V E M GS++ L HD L + +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGM 152
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 153 LRGIASGMKYLSDMG---AVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 207
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNL---- 96
LG GGFG V + + + VAIKQ + NRE + +E+ ++ L+HPN+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 97 --IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
+ A D LL EY G + +L+ + R + + + L YLH+
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 141
Query: 155 AKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RDLK NI+L G K+ D G AK D + T +GT Y APE
Sbjct: 142 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPEL 195
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
+ + T+ D +SFG + E ++G
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 42 LGEGGFGRV----YKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LGEG FG+V Y ++ + VA+K L +G + E+ +L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 97 IGYCAD--GDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C + G+ L+ E++P GS++++L K ++ ++K A +G++YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYA 212
++RDL N+L++ + K+ DFGL K T R + Y APE
Sbjct: 134 Q---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 213 KTGQLTLKSDVYSFGVVLLEILS 235
+ + SDV+SFGV L E+L+
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNL---- 96
LG GGFG V + + + VAIKQ + NRE + +E+ ++ L+HPN+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 97 --IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
+ A D LL EY G + +L+ + R + + + L YLH+
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT-LLSDISSALRYLHEN 140
Query: 155 AKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RDLK NI+L G K+ D G AK D + T +GT Y APE
Sbjct: 141 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPEL 194
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
+ + T+ D +SFG + E ++G
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEV 82
+EL A N + ++G G FG V G L+ ++ VAIK L + R +FL E
Sbjct: 11 KELDAT--NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKI 140
++ HPN++ L G ++V E M GS++ L HD L + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGM 123
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+ +
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTT 178
Query: 201 MG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
G + +PE + T SDV+S+G+VL E++S
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGNREFLVEVL--MLSL 87
N + LG G FG+V + + ++ VA+K L +E L+ L M L
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLH----------DLSPGKKPLDWNTR 137
H N+VNL+G C G L++ EY G + + L + L
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
+ ++ A+G+ +L K I+RD+ N+LL G+ K+ DFGLA+ N V
Sbjct: 167 LHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 198 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T++SDV+S+G++L EI S
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 197 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 248
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 91/198 (45%), Gaps = 19/198 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
+G G FG VY ++ VAIK++ +G Q N ++ + EV L L HPN + G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
LV EY LGS D L KKPL + GA +GL YLH
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 174
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY---AKTG 215
+I+RD+K NILL KL DFG A + + +GT + APE G
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAPEVILAMDEG 228
Query: 216 QLTLKSDVYSFGVVLLEI 233
Q K DV+S G+ +E+
Sbjct: 229 QYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
+G G FG VY ++ VAIK++ +G Q N ++ + EV L L HPN + G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
LV EY LGS D L KKPL + GA +GL YLH
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLL---EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY---AKT 214
+I+RD+K NILL KL DFG A + P + +GT + APE
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPYWMAPEVILAMDE 188
Query: 215 GQLTLKSDVYSFGVVLLEI 233
GQ K DV+S G+ +E+
Sbjct: 189 GQYDGKVDVWSLGITCIEL 207
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 106/224 (47%), Gaps = 21/224 (9%)
Query: 23 TLTFRELAAA--TKNFRSESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR- 76
T T E A N + ++G G FG V G L+ ++ VAIK L + R
Sbjct: 32 TQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR 91
Query: 77 EFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDW 134
+FL E ++ HPN++ L G ++V E M GS++ L HD L
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-- 149
Query: 135 NTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNT 194
+ + G A G++YL D ++RDL NIL++ K+SDFGL+++ + D+
Sbjct: 150 ---VGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDP 201
Query: 195 HVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ G + +PE + T SDV+S+G+VL E++S
Sbjct: 202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 141 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 192
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 38/227 (16%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVE--VLMLSLLHHPN 92
N + L+G G +G VYKG L+ + VA+K + F+ E + + L+ H N
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE--RPVAVKVF---SFANRQNFINEKNIYRVPLMEHDN 68
Query: 93 LVNLI----GYCADGD-QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+ I ADG + LLV EY P GS+ +L DW + ++A RG
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRG 123
Query: 148 LEYLH------DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA------KLGPVGDNTH 195
L YLH D KP + +RDL N+L+ +SDFGL+ +L G+ +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 196 VSTRVMGTYGYCAPEYAKTGQLTLKS--------DVYSFGVVLLEIL 234
+ +GT Y APE + G + L+ D+Y+ G++ EI
Sbjct: 184 AAISEVGTIRYMAPEVLE-GAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 39 ESLLGEGGFGRVYKGYLESINQ---DVAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPNLV 94
E ++G G FG V G L+ + VAIK L + R +FL E ++ HPN++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA---GAARGLEYL 151
+L G ++V EYM GS++ L KK T +++ G + G++YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFL------KKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCA 208
D ++RDL NIL++ K+SDFGL+++ + D+ + G + A
Sbjct: 141 SDMG---YVHRDLAARNILINSNLVCKVSDFGLSRV--LEDDPEAAYTTRGGKIPIRWTA 195
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILS 235
PE + T SDV+S+G+V+ E++S
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 34/220 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPN 92
LGEG FG+V +++D VA+K L + + + + + E+ M+ ++ H N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL---------HDLSPGKKP---LDWNTRMKI 140
++NL+G C ++ EY G++ ++L + +P P L +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A ARG+EYL K I+RDL N+L+ K++DFGLA+ D H+
Sbjct: 156 AYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYK 207
Query: 201 MGTYG-----YCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
T G + APE T +SDV+SFGV+L EI +
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ EY G++ ++L P + P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 17/208 (8%)
Query: 37 RSESLLGEGGFGRVYKGYLESINQD---VAIKQLDRNGVQGNR-EFLVEVLMLSLLHHPN 92
+ E ++G G FG V G+L+ + VAIK L + R +FL E ++ HPN
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
+++L G +++ E+M GS++ L + G+ + + + G A G++YL
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVI--QLVGMLRGIAAGMKYLA 126
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG-----YC 207
D ++R L NIL++ K+SDFGL++ + D+T T G +
Sbjct: 127 DMN---YVHRALAARNILVNSNLVCKVSDFGLSRF--LEDDTSDPTYTSALGGKIPIRWT 181
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILS 235
APE + + T SDV+S+G+V+ E++S
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMS 209
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ EY G++ ++L P + P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S L+H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 110/228 (48%), Gaps = 24/228 (10%)
Query: 24 LTFRELAAATKNF---------RSESLLGEGGFGRVYKGYLESINQD---VAIKQLDRNG 71
TF + A + F + E ++G G FG V G L+ + VAIK L
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 72 V-QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKK 130
+ R+FL E ++ HPN+++L G +++ EYM GS++ L + G+
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRF 128
Query: 131 PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPV 190
+ + + G G++YL D + ++RDL NIL++ K+SDFG++++ +
Sbjct: 129 TV--IQLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCKVSDFGMSRV--L 181
Query: 191 GDNTHVSTRVMG---TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
D+ + G + APE + T SDV+S+G+V+ E++S
Sbjct: 182 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 55/315 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN-----QDVAIKQLDRNGVQGN-REFLVEVLMLSL 87
KN LGEG FG+V K + VA+K L N R+ L E +L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHD---LSPG---------------- 128
++HP+++ L G C+ LL+ EY GS+ L + + PG
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 129 -KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 187
++ L + A ++G++YL A+ +++RDL NIL+ G K+SDFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR- 198
Query: 188 GPVGDNTHVSTRVMGTYGYCAPEYAKTGQL-----TLKSDVYSFGVVLLEILSGRKAVDT 242
D + V + G ++ L T +SDV+SFGV+L EI+
Sbjct: 199 ----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV-------- 246
Query: 243 SKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPV 302
+ + R +T H + + P + + C ++PD RPV
Sbjct: 247 TLGGNPYPGIPPERLFNLLKTGHRM--------ERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 303 IADVVTALAYLASQK 317
AD+ L + ++
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 55/315 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN-----QDVAIKQLDRNGVQGN-REFLVEVLMLSL 87
KN LGEG FG+V K + VA+K L N R+ L E +L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHD---LSPG---------------- 128
++HP+++ L G C+ LL+ EY GS+ L + + PG
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 129 -KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 187
++ L + A ++G++YL A+ +++RDL NIL+ G K+SDFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR- 198
Query: 188 GPVGDNTHVSTRVMGTYGYCAPEYAKTGQL-----TLKSDVYSFGVVLLEILSGRKAVDT 242
D + V + G ++ L T +SDV+SFGV+L EI+
Sbjct: 199 ----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV-------- 246
Query: 243 SKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPV 302
+ + R +T H + + P + + C ++PD RPV
Sbjct: 247 TLGGNPYPGIPPERLFNLLKTGHRM--------ERPDNCSEEMYRLMLQCWKQEPDKRPV 298
Query: 303 IADVVTALAYLASQK 317
AD+ L + ++
Sbjct: 299 FADISKDLEKMMVKR 313
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNL 96
+LG GG V+ +++DVA+K L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 97 IGY----CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
G +V EY+ ++ D +H + P+ +++ A A + L + H
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH 133
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K +NI++ K+ DFG+A+ + G++ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
A+ + +SDVYS G VL E+L+G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S L+H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 130/312 (41%), Gaps = 49/312 (15%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN-----QDVAIKQLDRNGVQGN-REFLVEVLMLSL 87
KN LGEG FG+V K + VA+K L N R+ L E +L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHD---LSPG---------------- 128
++HP+++ L G C+ LL+ EY GS+ L + + PG
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 129 -KKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL 187
++ L + A ++G++YL A+ +++RDL NIL+ G K+SDFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR- 198
Query: 188 GPVGDNTHVSTRVMGTY--GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKA 245
V + R G + A E T +SDV+SFGV+L EI+ +
Sbjct: 199 -DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV--------TLG 249
Query: 246 AAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIAD 305
+ R +T H + + P + + C ++PD RPV AD
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRM--------ERPDNCSEEMYRLMLQCWKQEPDKRPVFAD 301
Query: 306 VVTALAYLASQK 317
+ L + ++
Sbjct: 302 ISKDLEKMMVKR 313
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR-----NGVQGNREFLVEVLML 85
A N++ LGEG FG+V Y + Q VA+K +++ + +QG E E+ L
Sbjct: 10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 67
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
LL HP+++ L D+ ++V EY + L D + + +
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQII 122
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
+EY H + +++RDLK N+LLD + K++DFGL+ + G+ S G+
Sbjct: 123 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 176
Query: 206 YCAPEYAKTGQLTL--KSDVYSFGVVLLEILSGRKAVD 241
Y APE +G+L + DV+S GV+L +L R D
Sbjct: 177 YAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNL 96
+LG GG V+ +++DVA+K L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 97 I----GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
G +V EY+ ++ D +H + P+ +++ A A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH 133
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K +NI++ K+ DFG+A+ + G++ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
A+ + +SDVYS G VL E+L+G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR-----NGVQGNREFLVEVLML 85
A N++ LGEG FG+V Y + Q VA+K +++ + +QG E E+ L
Sbjct: 11 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 68
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
LL HP+++ L D+ ++V EY + L D + + +
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQII 123
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
+EY H + +++RDLK N+LLD + K++DFGL+ + G+ S G+
Sbjct: 124 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 177
Query: 206 YCAPEYAKTGQLTL--KSDVYSFGVVLLEILSGRKAVD 241
Y APE +G+L + DV+S GV+L +L R D
Sbjct: 178 YAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 129/301 (42%), Gaps = 41/301 (13%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSPGKKP-------LDWNTRMKIAA 142
NL+G C G +++ E+ G++ +L ++ P K P L + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 143 GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG 202
A+G+E+L A I+RDL NILL K+ DFGLA+ +
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ- 260
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEG 267
Query: 261 DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYES 320
R R PE+ YQ + C H +P RP +++V L L +
Sbjct: 268 TRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
Query: 321 D 321
D
Sbjct: 316 D 316
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR-----NGVQGNREFLVEVLML 85
A N++ LGEG FG+V Y + Q VA+K +++ + +QG E E+ L
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 58
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
LL HP+++ L D+ ++V EY + L D + + +
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQII 113
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
+EY H + +++RDLK N+LLD + K++DFGL+ + G+ S G+
Sbjct: 114 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 167
Query: 206 YCAPEYAKTGQLTL--KSDVYSFGVVLLEILSGRKAVD 241
Y APE +G+L + DV+S GV+L +L R D
Sbjct: 168 YAAPEVI-SGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHP 91
+F +LG+G FG+V + ++ A+K L ++ V + + +VE +L+L P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 92 NLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
+ + C RL V EY+ G + H+ + K+P + AA A GL +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFF 457
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAP 209
L K +IYRDLK N++LD H K++DFG+ K + D V+T+ GT Y AP
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAP 511
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGR 237
E D ++FGV+L E+L+G+
Sbjct: 512 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR-----NGVQGNREFLVEVLML 85
A N++ LGEG FG+V Y + Q VA+K +++ + +QG E E+ L
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYL 62
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
LL HP+++ L D+ ++V EY + L D + + +
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEY-----AGNELFDYIVQRDKMSEQEARRFFQQII 117
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
+EY H + +++RDLK N+LLD + K++DFGL+ + G+ S G+
Sbjct: 118 SAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPN 171
Query: 206 YCAPEYAKTGQLTL--KSDVYSFGVVLLEILSGRKAVD 241
Y APE +G+L + DV+S GV+L +L R D
Sbjct: 172 YAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 125
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 126 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 186 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 215
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---GKKPLDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P L + +A A G +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 17/201 (8%)
Query: 42 LGEGGFGRVYKGY--LESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIG 98
LG G FG V +G + DVAIK L + + + E + E ++ L +P +V LIG
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP-LDWNTRMKIAAGAARGLEYLHDKAKP 157
C + +LV E G LH GK+ + + ++ + G++YL +K
Sbjct: 78 VC-QAEALMLVMEMAGGGP----LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN-- 130
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAKT 214
++RDL N+LL ++ K+SDFGL+K LG D+++ + R G + + APE
Sbjct: 131 -FVHRDLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINF 187
Query: 215 GQLTLKSDVYSFGVVLLEILS 235
+ + +SDV+S+GV + E LS
Sbjct: 188 RKFSSRSDVWSYGVTMWEALS 208
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G DVAIK + + G EF+ E ++ L H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ EYM G + ++L ++ + +++ +EYL K ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLT 218
RDL N L++ K+SDFGL++ V D+ + S+R G+ + PE + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSR--GSKFPVRWSPPEVLMYSKFS 184
Query: 219 LKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY 277
KSD+++FGV++ EI S G+ + + +A L++ P L +
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------PHLASE- 233
Query: 278 PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ + C HE+ D RP +++ +
Sbjct: 234 ------KVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + ++L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSXQE 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ EY G++ ++L P + P + T + +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 30/279 (10%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQ---LDRNGVQGNREFLVEVLMLSLLHHP 91
NFR E +G G F VY+ VA+K+ D + + + E+ +L L+HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 92 NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
N++ + ++ +V E G + + K+ + T K LE++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
H + V++RD+K +N+ + KL D GL + T + ++GT Y +PE
Sbjct: 153 HSRR---VMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPER 207
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADP 271
KSD++S G +L E+ AA QS P + D+ +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEM------------AALQS------PFYGDKMNLYSLCKK 249
Query: 272 ELQGQYPP---RGFYQAL-AVAAMCVHEQPDMRPVIADV 306
Q YPP + + L + MC++ P+ RP + V
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP------------GKKPLDWNTRMKI 140
++NL+G C ++ EY G++ ++L P ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP------------GKKPLDWNTRMKI 140
++NL+G C ++ EY G++ ++L P ++ + + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 15/208 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHP 91
+F +LG+G FG+V + ++ A+K L ++ V + + +VE +L+L P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 92 NLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
+ + C RL V EY+ G + H+ + K+P + AA A GL +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFF 136
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAP 209
L K +IYRDLK N++LD H K++DFG+ K + D V+T+ GT Y AP
Sbjct: 137 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAP 190
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGR 237
E D ++FGV+L E+L+G+
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN---QDVAIKQLDRNGV---QGNREFLVEVLMLSL 87
K+ R LG+G FG V +G ++ + VA+K L + + + +F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L H NL+ L G ++ V E PLGS+ D L G L T + A A G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GTLSRYAVQVAEG 127
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT-YGY 206
+ YL K I+RDL N+LL K+ DFGL + P D+ +V + +
Sbjct: 128 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
CAPE KT + SD + FGV L E+ +
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 25/216 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R + +G+G F +V ++VA+K +D+ + ++ EV ++ +L+HPN
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------ 146
+V L LV EY G V D+L ++ G RMK A+
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG--------RMKEKEARAKFRQIVS 125
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
++Y H K +++RDLK N+LLD + K++DFG + VG+ G+ Y
Sbjct: 126 AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPY 179
Query: 207 CAPEYAKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
APE + + + DV+S GV+L ++SG D
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 41 LLGEGGFGRVYKGYLE-----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVN 95
+LGEG FG V +G L+ S+ V +LD + + EFL E + HPN++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 96 LIGYCADGDQR-----LLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKIAAGAARGL 148
L+G C + + +++ +M G + +L L G K + T +K A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
EYL ++ ++RDL N +L ++DFGL+K GD + A
Sbjct: 161 EYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEI 233
E T KSDV++FGV + EI
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
+G+G FG V+KG Q VAIK +D + E + E+ +LS + G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
G + ++ EY+ GS D L P D + +GL+YLH + K I
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLHSEKK---I 142
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K +N+LL KL+DFG+A G + D +GT + APE + K
Sbjct: 143 HRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSK 200
Query: 221 SDVYSFGVVLLEILSGR 237
+D++S G+ +E+ G
Sbjct: 201 ADIWSLGITAIELAKGE 217
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQD---VAIKQLDRNGV-QGNREFLVEVLMLSLLHHP 91
+ E ++G G FG V G L+ + VAIK L + R+FL E ++ HP
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 75
Query: 92 NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
N+++L G +++ EYM GS++ L + G+ + + + G G++YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTV--IQLVGMLRGIGSGMKYL 132
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCA 208
D + ++RDL NIL++ K+SDFG++++ + D+ + G + A
Sbjct: 133 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRV--LEDDPEAAYTTRGGKIPIRWTA 187
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILS 235
PE + T SDV+S+G+V+ E++S
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 127
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 17/205 (8%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNL 96
+LG GG V+ +++DVA+K L R + + F + E + L+HP +V +
Sbjct: 36 ILGFGGMSEVHLARDLRLHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 94
Query: 97 I----GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
G +V EY+ ++ D +H + P+ +++ A A + L + H
Sbjct: 95 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH 150
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K +NI++ K+ DFG+A+ + G++ + V+GT Y +PE
Sbjct: 151 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
A+ + +SDVYS G VL E+L+G
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG +G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN---QDVAIKQLDRNGV---QGNREFLVEVLMLSL 87
K+ R LG+G FG V +G ++ + VA+K L + + + +F+ EV +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L H NL+ L G ++ V E PLGS+ D L G L T + A A G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GTLSRYAVQVAEG 127
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT-YGY 206
+ YL K I+RDL N+LL K+ DFGL + P D+ +V + +
Sbjct: 128 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
CAPE KT + SD + FGV L E+ +
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIG 98
+LG+G FG V K Q+ A+K +++ + L EV +L L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V E G + D + +K + +I G+ Y+H K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 159 VIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
+++RDLK NILL ++ K+ DFGL+ NT + R+ GT Y APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPEVLR-G 197
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
K DV+S GV+L +LSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNL 96
+LG GG V+ ++DVA+K L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 97 I----GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
G +V EY+ ++ D +H + P+ +++ A A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH 133
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K +NIL+ K+ DFG+A+ + G++ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
A+ + +SDVYS G VL E+L+G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN---QDVAIKQLDRNGV---QGNREFLVEVLMLSL 87
K+ R LG+G FG V +G ++ + VA+K L + + + +F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L H NL+ L G ++ V E PLGS+ D L G L T + A A G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GTLSRYAVQVAEG 133
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT-YGY 206
+ YL K I+RDL N+LL K+ DFGL + P D+ +V + +
Sbjct: 134 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
CAPE KT + SD + FGV L E+ +
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ EY G++ ++L P + P + T + +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQD---VAIKQLDRNGV-QGNREFLVEVLMLSLLHHP 91
+ E ++G G FG V G L+ + VAIK L + R+FL E ++ HP
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHP 69
Query: 92 NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
N+++L G +++ EYM GS++ L + G+ + + + G G++YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK-NDGRFTV--IQLVGMLRGIGSGMKYL 126
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TYGYCA 208
D + ++RDL NIL++ K+SDFG++++ + D+ + G + A
Sbjct: 127 SDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRV--LEDDPEAAYTTRGGKIPIRWTA 181
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILS 235
PE + T SDV+S+G+V+ E++S
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN---QDVAIKQLDRNGV---QGNREFLVEVLMLSL 87
K+ R LG+G FG V +G ++ + VA+K L + + + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L H NL+ L G ++ V E PLGS+ D L G L T + A A G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GTLSRYAVQVAEG 123
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT-YGY 206
+ YL K I+RDL N+LL K+ DFGL + P D+ +V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
CAPE KT + SD + FGV L E+ +
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
Query: 28 ELAAATKN-FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQ---GNREFLVEVL 83
E TKN FR +LG+GGFG V + + + A K+L++ ++ G L E
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 84 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
+L ++ +V+L D LV M G ++ H++ + G+ + AA
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAE 294
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
GLE LH + ++YRDLK NILLD H ++SD GLA P G + RV GT
Sbjct: 295 ICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GT 348
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLV 252
GY APE K + T D ++ G +L E+++G+ K ++ V
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN---QDVAIKQLDRNGV---QGNREFLVEVLMLSL 87
K+ R LG+G FG V +G ++ + VA+K L + + + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L H NL+ L G ++ V E PLGS+ D L G L T + A A G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GTLSRYAVQVAEG 123
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT-YGY 206
+ YL K I+RDL N+LL K+ DFGL + P D+ +V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
CAPE KT + SD + FGV L E+ +
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 31 AATKNFRSESLLGEGGFGRVY-----------KGYLESINQDVAIKQLDRNGVQGNREFL 79
A F +LG+G FG+V+ + Y + + +K DR + R+ L
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 80 VEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 138
VEV +HP +V L Y + +L L+ +++ G D LS + + +
Sbjct: 81 VEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKF 130
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+A A L++LH +IYRDLK NILLD H KL+DFGL+K D+ +
Sbjct: 131 YLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAY 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
GT Y APE T +D +SFGV++ E+L+G
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LG G FG VY+G + + D VA+K L + Q +FL+E L++S +H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP-GKKP--LDWNTRMKIAAGAARGLEYLH 152
IG R ++ E M G ++ L + P +P L + +A A G +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 153 DKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ I+RD+ N LL G K+ DFG+A+ M + P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILS 235
E G T K+D +SFGV+L EI S
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 110/229 (48%), Gaps = 12/229 (5%)
Query: 28 ELAAATKN-FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQ---GNREFLVEVL 83
E TKN FR +LG+GGFG V + + + A K+L++ ++ G L E
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQ 236
Query: 84 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
+L ++ +V+L D LV M G ++ H++ + G+ + AA
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM--GQAGFPEARAVFYAAE 294
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
GLE LH + ++YRDLK NILLD H ++SD GLA P G + RV GT
Sbjct: 295 ICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GT 348
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLV 252
GY APE K + T D ++ G +L E+++G+ K ++ V
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ EY G++ ++L P + P + T + +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 437 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 489
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 490 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ EY G++ ++L P + P + T + +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 28/214 (13%)
Query: 35 NFRSESLLGEGGFGRVY-----------KGYLESINQDVAIKQLDRNGVQGNREFLVEVL 83
F +LG+G FG+V+ + Y + + +K DR + R+ LVEV
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV- 84
Query: 84 MLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA 142
+HP +V L Y + +L L+ +++ G D LS + + + +A
Sbjct: 85 -----NHPFIVKL-HYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKFYLAE 135
Query: 143 GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG 202
A L++LH +IYRDLK NILLD H KL+DFGL+K D+ + G
Sbjct: 136 -LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAYSFCG 189
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE T +D +SFGV++ E+L+G
Sbjct: 190 TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ EY G++ ++L P + P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ +++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 438 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 490
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 491 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 28/218 (12%)
Query: 31 AATKNFRSESLLGEGGFGRVY-----------KGYLESINQDVAIKQLDRNGVQGNREFL 79
A F +LG+G FG+V+ + Y + + +K DR + R+ L
Sbjct: 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL 80
Query: 80 VEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 138
VEV +HP +V L Y + +L L+ +++ G D LS + + +
Sbjct: 81 VEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKF 130
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+A A L++LH +IYRDLK NILLD H KL+DFGL+K D+ +
Sbjct: 131 YLAE-LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESI--DHEKKAY 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
GT Y APE T +D +SFGV++ E+L+G
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNL 96
+LG GG V+ ++DVA+K L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 97 I----GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
G +V EY+ ++ D +H + P+ +++ A A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH 133
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K +NI++ K+ DFG+A+ + G++ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
A+ + +SDVYS G VL E+L+G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 147
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 95 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 147
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 148 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 206 KFSSKSDVWSFGVLMWEAFS 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%), Gaps = 18/219 (8%)
Query: 42 LGEGGFGRVYKGY--LESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIG 98
LG G FG V +G + DVAIK L + + + E + E ++ L +P +V LIG
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP-LDWNTRMKIAAGAARGLEYLHDKAKP 157
C + +LV E G LH GK+ + + ++ + G++YL +K
Sbjct: 404 VC-QAEALMLVMEMAGGGP----LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN-- 456
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTY--GYCAPEYAKT 214
++R+L N+LL ++ K+SDFGL+K LG D+++ + R G + + APE
Sbjct: 457 -FVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECINF 513
Query: 215 GQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLV 252
+ + +SDV+S+GV + E LS G+K K + +
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 102/205 (49%), Gaps = 17/205 (8%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV----EVLMLSLLHHPNLVNL 96
+LG GG V+ ++DVA+K L R + + F + E + L+HP +V +
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 97 I----GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
G +V EY+ ++ D +H + P+ +++ A A + L + H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSH 133
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K +NI++ K+ DFG+A+ + G++ + V+GT Y +PE
Sbjct: 134 QNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
A+ + +SDVYS G VL E+L+G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN---QDVAIKQLDRNGV---QGNREFLVEVLMLSL 87
K+ R LG+G FG V +G ++ + VA+K L + + + +F+ EV +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L H NL+ L G ++ V E PLGS+ D L G L T + A A G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GTLSRYAVQVAEG 133
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT-YGY 206
+ YL K I+RDL N+LL K+ DFGL + P D+ V + +
Sbjct: 134 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
CAPE KT + SD + FGV L E+ +
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 97/209 (46%), Gaps = 14/209 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESIN---QDVAIKQLDRNGV---QGNREFLVEVLMLSL 87
K+ R LG+G FG V +G ++ + VA+K L + + + +F+ EV +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L H NL+ L G ++ V E PLGS+ D L G L T + A A G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK-HQGHFLL--GTLSRYAVQVAEG 123
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT-YGY 206
+ YL K I+RDL N+LL K+ DFGL + P D+ V + +
Sbjct: 124 MGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
CAPE KT + SD + FGV L E+ +
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 131/301 (43%), Gaps = 43/301 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL--DRNGVQGNREFLVEVLMLSLLH 89
+ + + + L+GEG +G V K + + VAIK+ + + + E+ +L L
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDH--LHDLSPGKKPLDWNTRMKIAAGAARG 147
H NLVNL+ C + LV+E++ DH L DL LD+ K G
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFV------DHTILDDLELFPNGLDYQVVQKYLFQIING 136
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL----GPVGDNTHVSTRVMGT 203
+ + H +I+RD+K NIL+ + KL DFG A+ G V D+ V+TR
Sbjct: 137 IGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD-EVATR---- 188
Query: 204 YGYCAPEY----AKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ--------SL 251
Y APE K G+ DV++ G ++ E+ G + +L
Sbjct: 189 -WYRAPELLVGDVKYGKAV---DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL 244
Query: 252 VAWARPLFQDRTRHSLIADPELQGQYPPRGFYQALA-----VAAMCVHEQPDMRPVIADV 306
+ + LF + + PE++ + P Y L+ +A C+H PD RP A++
Sbjct: 245 IPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
Query: 307 V 307
+
Sbjct: 305 L 305
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 41 LLGE-GGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
++GE G FG+VYK + + A K +D + +++VE+ +L+ HPN+V L+
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
+ ++ E+ G+V+ + +L ++PL + + L YLHD +
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNK---I 129
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR----VMGTYGYCAPEY---- 211
I+RDLK NIL KL+DFG++ NT + +GT + APE
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTXIQRRDSFIGTPYWMAPEVVMCE 184
Query: 212 -AKTGQLTLKSDVYSFGVVLLEI 233
+K K+DV+S G+ L+E+
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEM 207
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH- 90
+F ++G GGFG VY + A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 91 --PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARG 147
P +V + D+ + + M G + HL + + M+ AA G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
LE++H++ V+YRDLK +NILLD H ++SD GLA H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSG 236
APE + G +D +S G +L ++L G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH- 90
+F ++G GGFG VY + A+K LD+ + QG L E +MLSL+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 91 --PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARG 147
P +V + D+ + + M G + HL + + M+ AA G
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 303
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
LE++H++ V+YRDLK +NILLD H ++SD GLA H S +GT+GY
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 356
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSG 236
APE + G +D +S G +L ++L G
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 93 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 145
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 146 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 204 KFSSKSDVWSFGVLMWEAFS 223
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
LGEG G V + VA+K +D + V E+ + +L+H N+V G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G+ + L EY G + D + +P ++ AG YLH +
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV----YLHGIG---IT 126
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLK 220
+RD+K N+LLD + K+SDFGLA + + + ++ GT Y APE K + +
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 221 S-DVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
DV+S G+VL +L+G D + ++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDSCQE 216
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 39/288 (13%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VA+K +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------ 146
+V L LV EY G V D+L ++ G RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG--------RMKEKEARAKFRQIVS 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
++Y H K +++RDLK N+LLD + K++DFG + G+ G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 207 CAPEYAKTGQLT-LKSDVYSFGVVLLEILSGRKAVD--TSKAAAEQSLVAWARPLF---- 259
APE + + + DV+S GV+L ++SG D K E+ L R F
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMST 238
Query: 260 --QDRTRHSLIADPELQGQYPPRGFYQALAVAAMCV-HEQPDMRPVIA 304
++ + LI +P +G Q + M V HE +++P +A
Sbjct: 239 DCENLLKKFLILNPSKRGTLE-----QIMKDRWMNVGHEDDELKPYVA 281
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 85 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 137
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 138 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 196 KFSSKSDVWSFGVLMWEAFS 215
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH- 90
+F ++G GGFG VY + A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 91 --PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARG 147
P +V + D+ + + M G + HL + + M+ AA G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
LE++H++ V+YRDLK +NILLD H ++SD GLA H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSG 236
APE + G +D +S G +L ++L G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH- 90
+F ++G GGFG VY + A+K LD+ + QG L E +MLSL+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 91 --PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARG 147
P +V + D+ + + M G + HL + + M+ AA G
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEIILG 304
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
LE++H++ V+YRDLK +NILLD H ++SD GLA H S +GT+GY
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS---VGTHGYM 357
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSG 236
APE + G +D +S G +L ++L G
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIG 98
+LG+G FG V K Q+ A+K +++ + L EV +L L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V E G + D + +K + +I G+ Y+H K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 159 VIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
+++RDLK NILL ++ K+ DFGL+ NT + R+ GT Y APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPEVLR-G 197
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
K DV+S GV+L +LSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G DVAIK + + G EF+ E ++ L H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ EYM G + ++L ++ + +++ +EYL K ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLT 218
RDL N L++ K+SDFGL++ V D+ + S+ +G+ + PE + +
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 199
Query: 219 LKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY 277
KSD+++FGV++ EI S G+ + + +A L++ P L +
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------PHLASE- 248
Query: 278 PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ + C HE+ D RP +++ +
Sbjct: 249 ------KVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIG 98
+LG+G FG V K Q+ A+K +++ + L EV +L L HPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V E G + D + +K + +I G+ Y+H K
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEI----IKRKRFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 159 VIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
+++RDLK NILL ++ K+ DFGL+ NT + R+ GT Y APE + G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKMKDRI-GTAYYIAPEVLR-G 197
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
K DV+S GV+L +LSG
Sbjct: 198 TYDEKCDVWSAGVILYILLSG 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 131
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 190 KFSSKSDVWSFGVLMWEAFS 209
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
+++L+G C ++ EY G++ ++L P + P + T + +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + + VA+K++D Q EV+++ HH N+V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK------IAAGAARGLEYLHDKA 155
GD+ +V E++ G++ D + +TRM + R L YLH++
Sbjct: 113 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIATVCLSVLRALSYLHNQG 161
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
VI+RD+K +ILL KLSDFG V ++GT + APE
Sbjct: 162 ---VIHRDIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRL 216
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ D++S G++++E++ G
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDG 237
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 73 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 125
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 126 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 184 KFSSKSDVWSFGVLMWEAFS 203
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G DVAIK + + G EF+ E ++ L H LV L G C
Sbjct: 16 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ EYM G + ++L ++ + +++ +EYL K ++
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 127
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLT 218
RDL N L++ K+SDFGL++ V D+ + S+ +G+ + PE + +
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 183
Query: 219 LKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY 277
KSD+++FGV++ EI S G+ + + +A L++ P L +
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------PHLASE- 232
Query: 278 PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ + C HE+ D RP +++ +
Sbjct: 233 ------KVYTIMYSCWHEKADERPTFKILLSNI 259
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G DVAIK + + G EF+ E ++ L H LV L G C
Sbjct: 12 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ EYM G + ++L ++ + +++ +EYL K ++
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 123
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLT 218
RDL N L++ K+SDFGL++ V D+ + S+ +G+ + PE + +
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 179
Query: 219 LKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY 277
KSD+++FGV++ EI S G+ + + +A L++ P L +
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------PHLASE- 228
Query: 278 PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ + C HE+ D RP +++ +
Sbjct: 229 ------KVYTIMYSCWHEKADERPTFKILLSNI 255
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 128/300 (42%), Gaps = 40/300 (13%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSPGKKP------LDWNTRMKIAAG 143
NL+G C G +++ E+ G++ +L ++ P K L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
A+G+E+L A I+RDL NILL K+ DFGLA+ +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-D 261
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGT 268
Query: 262 RTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 321
R R PE+ YQ + C H +P RP +++V L L + D
Sbjct: 269 RMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 316
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 75 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 127
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY--GYCAPEYAKTG 215
++RDL N+LL ++ K+SDFGL+K D + + G + + APE
Sbjct: 128 -FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+ + KSDV+SFGV++ E S
Sbjct: 186 KFSSKSDVWSFGVLMWEAFS 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 94/216 (43%), Gaps = 30/216 (13%)
Query: 45 GGFGRVYKGYLESINQDVAIKQL---DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
G FG V+K L +N+ VA+K D+ Q EV L + H N++ IG
Sbjct: 35 GRFGCVWKAQL--LNEYVAVKIFPIQDKQSWQNE----YEVYSLPGMKHENILQFIGAEK 88
Query: 102 DGDQ----RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH----- 152
G L+ + GS+ D L + WN IA ARGL YLH
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLK-----ANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 153 --DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
D KP + +RD+K N+LL ++DFGLA G + + +GT Y APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 211 YAKTG-----QLTLKSDVYSFGVVLLEILSGRKAVD 241
+ L+ D+Y+ G+VL E+ S A D
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPG------------KKPLDWNTRMKI 140
++ L+G C ++ EY G++ ++L P ++ + + +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 42 LGEGGFGRVYKGYLE----SINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
LG G FG V KGY + V I + + N E L E ++ L +P +V +I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G C + + +LV E LG + +L + D N +++ + G++YL +
Sbjct: 79 GIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN-- 131
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTH-VSTRVMGTYGYCAPEYAKTGQ 216
++RDL N+LL ++ K+SDFGL+K +N + T + APE +
Sbjct: 132 -FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 217 LTLKSDVYSFGVVLLEILS 235
+ KSDV+SFGV++ E S
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ Y G++ ++L P + P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G DVAIK + + G EF+ E ++ L H LV L G C
Sbjct: 23 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ EYM G + ++L ++ + +++ +EYL K ++
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 134
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLT 218
RDL N L++ K+SDFGL++ V D+ + S+ +G+ + PE + +
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 190
Query: 219 LKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY 277
KSD+++FGV++ EI S G+ + + +A L++ P L +
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------PHLASE- 239
Query: 278 PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ + C HE+ D RP +++ +
Sbjct: 240 ------KVYTIMYSCWHEKADERPTFKILLSNI 266
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 27/270 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G DVAIK + + G EF+ E ++ L H LV L G C
Sbjct: 32 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ EYM G + ++L ++ + +++ +EYL K ++
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 143
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RDL N L++ K+SDFGL++ + D S + PE + + KS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 222 DVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQYPPR 280
D+++FGV++ EI S G+ + + +A L++ P L +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------PHLASE---- 248
Query: 281 GFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ + C HE+ D RP +++ +
Sbjct: 249 ---KVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 33/273 (12%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V G DVAIK + + G EF+ E ++ L H LV L G C
Sbjct: 17 LGTGQFGVVKYGKWRG-QYDVAIKMI-KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
++ EYM G + ++L ++ + +++ +EYL K ++
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLH 128
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT---YGYCAPEYAKTGQLT 218
RDL N L++ K+SDFGL++ V D+ + S+ +G+ + PE + +
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMYSKFS 184
Query: 219 LKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQDRTRHSLIADPELQGQY 277
KSD+++FGV++ EI S G+ + + +A L++ P L +
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR----------PHLASE- 233
Query: 278 PPRGFYQALAVAAMCVHEQPDMRPVIADVVTAL 310
+ + C HE+ D RP +++ +
Sbjct: 234 ------KVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 91 PNLVNLIGYCADGDQRLLV-YEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
P V L +C D++L Y G + ++ + D A LE
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALE 151
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
YLH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +P
Sbjct: 152 YLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSG 236
E SD+++ G ++ ++++G
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPN 92
F LLG+G FG+V ++ + A+K L + + E L E +L HP
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEYL 151
L L D+ V EY G + HL ++ + R + A L+YL
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDYL 264
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
H + V+YRDLK N++LD+ H K++DFGL K G + D + T GT Y APE
Sbjct: 265 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYLAPEV 320
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGR 237
+ D + GVV+ E++ GR
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 30 AAATKN-FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A T N F LLG+G FG+V ++ + A+K L + + E + E +L
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGA 144
HP L L D+ V EY G + HL ++ + R + A
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEI 117
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY 204
LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D + T GT
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTP 172
Query: 205 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
Y APE + D + GVV+ E++ GR
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
A+G+E+L A I+RDL NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ 260
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKE 257
Query: 261 -DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYE 319
R R PE+ YQ + C H +P RP +++V L L +
Sbjct: 258 GTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQ 305
Query: 320 SD 321
D
Sbjct: 306 QD 307
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPN 92
F LLG+G FG+V ++ + A+K L + + E L E +L HP
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEYL 151
L L D+ V EY G + HL ++ + R + A L+YL
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDYL 267
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
H + V+YRDLK N++LD+ H K++DFGL K G + D + T GT Y APE
Sbjct: 268 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FCGTPEYLAPEV 323
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGR 237
+ D + GVV+ E++ GR
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
A+G+E+L A I+RDL NILL K+ DFGLA+ +
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ 260
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKE 257
Query: 261 -DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYE 319
R R PE+ YQ + C H +P RP +++V L L +
Sbjct: 258 GTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQ 305
Query: 320 SD 321
D
Sbjct: 306 QD 307
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR---EFLVEVLMLSLLHHPNLVNLIG 98
LG G FG+V G E VA+K L+R ++ + E+ L L HP+++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ +V EY+ G + D++ G+ LD ++ G++Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYI--CKNGR--LDEKESRRLFQQILSGVDYCHRHM--- 136
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
V++RDLK N+LLD + K++DFGL+ + G+ S G+ Y APE +G+L
Sbjct: 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVI-SGRLY 192
Query: 219 L--KSDVYSFGVVLLEILSGRKAVD 241
+ D++S GV+L +L G D
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
A+G+E+L A I+RDL NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ 260
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKE 266
Query: 261 -DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYE 319
R R PE+ YQ + C H +P RP +++V L L +
Sbjct: 267 GTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQ 314
Query: 320 SD 321
D
Sbjct: 315 QD 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYKGYLESINQD-------VAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPN 92
LGEG FG+V I++D VA+K L + + + LV E+ M+ ++ H N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSP---------GKKPLDWNTRMKIAAG 143
++NL+G C ++ Y G++ ++L P + P + T + +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 144 A---ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
ARG+EYL A I+RDL N+L+ K++DFGLA+ D +T
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+SFGV++ EI +
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHP 91
+F LLG+G FG+V ++ + A+K L + + E + E +L HP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 92 NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEY 150
L L D+ V EY G + HL ++ + R + A LEY
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEY 120
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH + V+YRD+K N++LD+ H K++DFGL K G + D + T GT Y APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEYLAPE 175
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGR 237
+ D + GVV+ E++ GR
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VAIK +D+ + ++ EV ++ +L+HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGK-KPLDWNTRMKIAAGAARGLEYL 151
+V L L+ EY G V D+L ++ G+ K + ++ + A ++Y
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSA---VQYC 127
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
H K +++RDLK N+LLD + K++DFG + VG G+ Y APE
Sbjct: 128 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPEL 181
Query: 212 AKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
+ + + DV+S GV+L ++SG D
Sbjct: 182 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAP 209
LH K +I+RDLK NILL+ H +++DFG AK L P ++ V GT Y +P
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 203
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSG 236
E + SD+++ G ++ ++++G
Sbjct: 204 ELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSPGKKP--------LDWNTRMKIA 141
NL+G C G +++ E+ G++ +L ++ P K+ L + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV---ST 198
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 212
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARP 257
R+ + APE T++SDV+SFGV+L EI S G K E + R
Sbjct: 213 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRR 265
Query: 258 LFQ-DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQ 316
L + R R PE+ YQ + C H +P RP +++V L L
Sbjct: 266 LKEGTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQA 313
Query: 317 KYESD 321
+ D
Sbjct: 314 NAQQD 318
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VA+K +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------ 146
+V L LV EY G V D+L ++ G RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG--------RMKEKEARAKFRQIVS 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
++Y H K +++RDLK N+LLD + K++DFG + G+ G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 207 CAPEYAKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
APE + + + DV+S GV+L ++SG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHP 91
+F LLG+G FG+V ++ + A+K L + + E + E +L HP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 92 NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEY 150
L L D+ V EY G + HL ++ + R + A LEY
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSALEY 120
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH + V+YRD+K N++LD+ H K++DFGL K G + D + T GT Y APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FCGTPEYLAPE 175
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGR 237
+ D + GVV+ E++ GR
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 10/211 (4%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLH 89
+++ F+ LG G + VYKG ++ VA+K++ + +G + E+ ++ L
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP--LDWNTRMKIAAGAARG 147
H N+V L ++ LV+E+M ++ ++ + G P L+ N +G
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L + H+ +++RDLK N+L+++ KL DFGLA+ + NT S V T Y
Sbjct: 121 LAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYR 175
Query: 208 APEYAKTGQLTLKS-DVYSFGVVLLEILSGR 237
AP+ + S D++S G +L E+++G+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYK----GYLES-INQDVAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLV 94
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLH---------DLSPG-----KKPLDWNTRMKI 140
NL+G C G L++ EY G + + L SP + LD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
+ A+G+ +L K I+RDL NILL G K+ DFGLA+ N V
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+S+G+ L E+ S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYK----GYLES-INQDVAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLV 94
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLH---------DLSPG-----KKPLDWNTRMKI 140
NL+G C G L++ EY G + + L SP + LD +
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
+ A+G+ +L K I+RDL NILL G K+ DFGLA+ N V
Sbjct: 167 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+S+G+ L E+ S
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 15/175 (8%)
Query: 19 ITAQTLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF 78
QT+ EL R +L EGGF VY+ ++ A+K+L N + NR
Sbjct: 18 FVGQTVELGEL-----RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI 72
Query: 79 LVEV-LMLSLLHHPNLVNLIGYCADGDQR-------LLVYEYMPLGSVEDHLHDLSPGKK 130
+ EV M L HPN+V + G + L+ + G + + L + +
Sbjct: 73 IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKME-SRG 131
Query: 131 PLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 185
PL +T +KI R ++++H + KPP+I+RDLK N+LL KL DFG A
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 125
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 126 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 182
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 183 LLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 41 LLGEGGFGRVYKGYL-----ESINQDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLV 94
+LGEG FG VY+G E IN VA+K ++ N+E F+ E +++ L HP++V
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
LIG + + ++ E P G + H L K L T + + + + YL
Sbjct: 73 KLIGI-IEEEPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT 214
++RD+ NIL+ KL DFGL++ D S + + +PE
Sbjct: 129 N---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINF 184
Query: 215 GQLTLKSDVYSFGVVLLEILSGRK 238
+ T SDV+ F V + EILS K
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGK 208
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV---ST 198
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARP 257
R+ + APE T++SDV+SFGV+L EI S G K E + R
Sbjct: 202 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRR 254
Query: 258 LFQ-DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQ 316
L + R R PE+ YQ + C H +P RP +++V L L
Sbjct: 255 LKEGTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQA 302
Query: 317 KYESD 321
+ D
Sbjct: 303 NAQQD 307
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 123
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 124 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 180
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 181 LLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV---ST 198
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 201
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARP 257
R+ + APE T++SDV+SFGV+L EI S G K E + R
Sbjct: 202 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRR 254
Query: 258 LFQ-DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQ 316
L + R R PE+ YQ + C H +P RP +++V L L
Sbjct: 255 LKEGTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQA 302
Query: 317 KYESD 321
+ D
Sbjct: 303 NAQQD 307
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 41 LLGEGGFGRVYKGYL-----ESINQDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLV 94
+LGEG FG VY+G E IN VA+K ++ N+E F+ E +++ L HP++V
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
LIG + + ++ E P G + H L K L T + + + + YL
Sbjct: 89 KLIGI-IEEEPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT 214
++RD+ NIL+ KL DFGL++ D S + + +PE
Sbjct: 145 N---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINF 200
Query: 215 GQLTLKSDVYSFGVVLLEILS 235
+ T SDV+ F V + EILS
Sbjct: 201 RRFTTASDVWMFAVCMWEILS 221
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 124
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 125 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 181
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 182 LLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV---ST 198
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 247
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARP 257
R+ + APE T++SDV+SFGV+L EI S G K E + R
Sbjct: 248 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRR 300
Query: 258 LFQ-DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQ 316
L + R R PE+ YQ + C H +P RP +++V L L
Sbjct: 301 LKEGTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQA 348
Query: 317 KYESD 321
+ D
Sbjct: 349 NAQQD 353
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 129/302 (42%), Gaps = 42/302 (13%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
A+G+E+L A I+RDL NILL K+ DFGLA+ +
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ 260
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKE 266
Query: 261 -DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYE 319
R R PE+ YQ + C H +P RP +++V L L +
Sbjct: 267 GTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQ 314
Query: 320 SD 321
D
Sbjct: 315 QD 316
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 122
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 123 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 179
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 180 LLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAP 209
LH K +I+RDLK NILL+ H +++DFG AK L P ++ V GT Y +P
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 204
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSG 236
E SD+++ G ++ ++++G
Sbjct: 205 ELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL---------HDLSPGKKPLDWNTRMKIAA-- 142
NL+G C G +++ E+ G++ +L + ++P D+ T +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 143 -GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV---ST 198
A+G+E+L A I+RDL NILL K+ DFGLA+ D +V
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDA 210
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARP 257
R+ + APE T++SDV+SFGV+L EI S G K E + R
Sbjct: 211 RL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRR 263
Query: 258 LFQ-DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQ 316
L + R R PE+ YQ + C H +P RP +++V L L
Sbjct: 264 LKEGTRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQA 311
Query: 317 KYESD 321
+ D
Sbjct: 312 NAQQD 316
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 148
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 149 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 45 GGFGRVYKGYLESINQDVAIKQL---DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
G FG V+K L +N VA+K D+ Q RE + + H NL+ I
Sbjct: 26 GRFGCVWKAQL--MNDFVAVKIFPLQDKQSWQSERE----IFSTPGMKHENLLQFIAAEK 79
Query: 102 DGD----QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA-- 155
G + L+ + GS+ D+L + WN +A +RGL YLH+
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKG-----NIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 156 ------KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
KP + +RD K N+LL L+DFGLA G + +GT Y AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 210 EYAKTG-----QLTLKSDVYSFGVVLLEILSGRKAVD 241
E + L+ D+Y+ G+VL E++S KA D
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYK----GYLES-INQDVAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLV 94
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLH---------DLSPG-----KKPLDWNTRMKI 140
NL+G C G L++ EY G + + L SP + LD +
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
+ A+G+ +L K I+RDL NILL G K+ DFGLA+ N V
Sbjct: 169 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+S+G+ L E+ S
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYK----GYLES-INQDVAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLV 94
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLH---------DLSPG-----KKPLDWNTRMKI 140
NL+G C G L++ EY G + + L SP + LD +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
+ A+G+ +L K I+RDL NILL G K+ DFGLA+ N V
Sbjct: 151 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+S+G+ L E+ S
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 24/215 (11%)
Query: 42 LGEGGFGRVYK----GYLES-INQDVAIKQLDRNGVQGNREFLV-EVLMLSLL-HHPNLV 94
LG G FG+V + G ++S VA+K L + RE L+ E+ +LS L +H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLH---------DLSPG-----KKPLDWNTRMKI 140
NL+G C G L++ EY G + + L SP + LD +
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
+ A+G+ +L K I+RDL NILL G K+ DFGLA+ N V
Sbjct: 174 SYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
+ APE T +SDV+S+G+ L E+ S
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VAIK +D+ + ++ EV ++ +L+HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGK-KPLDWNTRMKIAAGAARGLEYL 151
+V L L+ EY G V D+L ++ G+ K + ++ + A ++Y
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYL--VAHGRMKEKEARSKFRQIVSA---VQYC 130
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
H K +++RDLK N+LLD + K++DFG + VG G Y APE
Sbjct: 131 HQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPEL 184
Query: 212 AKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
+ + + DV+S GV+L ++SG D
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 41 LLGEGGFGRVYKGYL-----ESINQDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLV 94
+LGEG FG VY+G E IN VA+K ++ N+E F+ E +++ L HP++V
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKIN--VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
LIG + + ++ E P G + H L K L T + + + + YL
Sbjct: 77 KLIGI-IEEEPTWIIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT 214
++RD+ NIL+ KL DFGL++ D S + + +PE
Sbjct: 133 N---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESINF 188
Query: 215 GQLTLKSDVYSFGVVLLEILS 235
+ T SDV+ F V + EILS
Sbjct: 189 RRFTTASDVWMFAVCMWEILS 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VA+K +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------ 146
+V L LV EY G V D+L ++ G RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG--------RMKEKEARAKFRQIVS 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
++Y H K +++RDLK N+LLD + K++DFG + G+ G Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPY 178
Query: 207 CAPEYAKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
APE + + + DV+S GV+L ++SG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 29 LAAATKN-FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLM 84
+A T N F LLG+G FG+V ++ + A+K L + + E L E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 85 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAG 143
L HP L L D+ V EY G + HL ++ + R + A
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAE 117
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
L+YLH + V+YRDLK N++LD+ H K++DFGL K G + D + GT
Sbjct: 118 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FCGT 173
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
Y APE + D + GVV+ E++ GR
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 147
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 148 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 150
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 151 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VA++ +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------ 146
+V L LV EY G V D+L ++ G RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG--------RMKEKEARAKFRQIVS 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
++Y H K +++RDLK N+LLD + K++DFG + G+ G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPY 178
Query: 207 CAPEYAKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
APE + + + DV+S GV+L ++SG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 106/218 (48%), Gaps = 28/218 (12%)
Query: 31 AATKNFRSESLLGEGGFGRVY---------KGYLESIN--QDVAIKQLDRNGVQGNREFL 79
A +F +LG+G FG+V+ G+L ++ + +K DR + R+ L
Sbjct: 25 ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDIL 84
Query: 80 VEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 138
+V +HP +V L Y + +L L+ +++ G D LS + + +
Sbjct: 85 ADV------NHPFVVKL-HYAFQTEGKLYLILDFLRGG---DLFTRLSKEVMFTEEDVKF 134
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+A A GL++LH +IYRDLK NILLD H KL+DFGL+K D+ +
Sbjct: 135 YLAE-LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAY 188
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
GT Y APE + +D +S+GV++ E+L+G
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VA++ +D+ + + ++ EV ++ +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR------ 146
+V L LV EY G V D+L ++ G RMK A+
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYL--VAHG--------RMKEKEARAKFRQIVS 124
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
++Y H K +++RDLK N+LLD + K++DFG + G+ G+ Y
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPY 178
Query: 207 CAPEYAKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
APE + + + DV+S GV+L ++SG D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 90/213 (42%), Gaps = 20/213 (9%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLL-HHPNLV 94
F L+G G +G+VYKG Q AIK +D G + E E+ ML HH N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIA 84
Query: 95 NLIGYCAD------GDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
G DQ LV E+ GSV D + + +W I RGL
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGL 142
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
+LH VI+RD+K N+LL KL DFG++ + +GT + A
Sbjct: 143 SHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYWMA 197
Query: 209 PEYAKTGQ-----LTLKSDVYSFGVVLLEILSG 236
PE + KSD++S G+ +E+ G
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 129
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 130 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 44/293 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSPGKKP----LDWNTRMKIAAGAA 145
NL+G C G +++ E+ G++ +L ++ P K L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV---STRVMG 202
+G+E+L A I+RDL NILL K+ DFGLA+ D +V R+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARL-- 208
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ- 260
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FXRRLKEG 263
Query: 261 DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
R R PE+ YQ + C H +P RP +++V L L
Sbjct: 264 TRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNL 304
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 111/243 (45%), Gaps = 25/243 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV---EVLMLSLLHHPNLVNLIG 98
LGEG FG+V Q VA+K + R ++ + + E+ L LL HP+++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
++V EY G + D++ + KK + + + +EY H +
Sbjct: 77 VITTPTDIVMVIEYAG-GELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCH---RHK 128
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
+++RDLK N+LLD + K++DFGL+ + G+ S G+ Y APE G+L
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-VINGKLY 184
Query: 219 L--KSDVYSFGVVLLEILSGRKAVD---TSKAAAEQSLVAWARPLF-----QDRTRHSLI 268
+ DV+S G+VL +L GR D + + + P F Q R ++
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIV 244
Query: 269 ADP 271
ADP
Sbjct: 245 ADP 247
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VA+K +D+ + + ++ EV ++ +L+HPN
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHL--HDLSPGKKPLDWNTRMKIAAGAARGLEY 150
+V L LV EY G V D+L H K+ R K ++Y
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKE-----ARAKFRQ-IVSAVQY 121
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
H K +++RDLK N+LLD + K++DFG + G+ G+ Y APE
Sbjct: 122 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 175
Query: 211 YAKTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
+ + + DV+S GV+L ++SG D
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 12/207 (5%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAP 209
LH K +I+RDLK NILL+ H +++DFG AK L P ++ V GT Y +P
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSP 200
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSG 236
E SD+++ G ++ ++++G
Sbjct: 201 ELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 130/293 (44%), Gaps = 44/293 (15%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSPGKKP----LDWNTRMKIAAGAA 145
NL+G C G +++ E+ G++ +L ++ P K L + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV---STRVMG 202
+G+E+L A I+RDL NILL K+ DFGLA+ D +V R+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL-- 208
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ- 260
+ APE T++SDV+SFGV+L EI S G K E + R L +
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEG 263
Query: 261 DRTRHSLIADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
R R PE+ YQ + C H +P RP +++V L L
Sbjct: 264 TRMRAPDYTTPEM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNL 304
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG-YC 100
LG+G FG+VYK + A K ++ + +++VE+ +L+ HP +V L+G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
DG +++ E+ P G+V+ + +L G L + L +LH K +I
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSKR---II 139
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYA----- 212
+RDLK N+L+ +L+DFG++ N + +GT + APE
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 194
Query: 213 KTGQLTLKSDVYSFGVVLLEI 233
K K+D++S G+ L+E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG-YC 100
LG+G FG+VYK + A K ++ + +++VE+ +L+ HP +V L+G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
DG +++ E+ P G+V+ + +L G L + L +LH K +I
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSKR---II 131
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYA----- 212
+RDLK N+L+ +L+DFG++ N + +GT + APE
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVS-----AKNLKTLQKRDSFIGTPYWMAPEVVMCETM 186
Query: 213 KTGQLTLKSDVYSFGVVLLEI 233
K K+D++S G+ L+E+
Sbjct: 187 KDTPYDYKADIWSLGITLIEM 207
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F V + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 144
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 145 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSL 87
+F LLG+G FG+V ++ + A+K L + + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAAR 146
HP L L D+ V EY G + HL ++ + R + A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 171
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
APE + D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F +G G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EYMP G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + K++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V +E L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + K++DFGLAK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSL 87
+F LLG+G FG+V ++ + A+K L + + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAAR 146
HP L L D+ V EY G + HL ++ + R + A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 171
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
APE + D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 93/207 (44%), Gaps = 13/207 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHP 91
F LLG+G FG+V ++ + A+K L + + E L E +L HP
Sbjct: 11 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 92 NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAARGLEY 150
L L D+ V EY G + HL ++ + R + A L+Y
Sbjct: 71 FLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSALDY 125
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH + V+YRDLK N++LD+ H K++DFGL K G + D + GT Y APE
Sbjct: 126 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FCGTPEYLAPE 181
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGR 237
+ D + GVV+ E++ GR
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSL 87
+F LLG+G FG+V ++ + A+K L + + E + E +L
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAAR 146
HP L L D+ V EY G + HL ++ + R + A
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 121
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D + GT Y
Sbjct: 122 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 176
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
APE + D + GVV+ E++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F +G G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EYMP G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + K++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--REFLVEVLMLSLLHHPN 92
N+R +G+G F +V ++VA+K +D+ + + ++ EV + +L+HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
+V L LV EY G V D+L ++ G+ + R K ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYL--VAHGRXK-EKEARAKFRQ-IVSAVQYCH 130
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
K +++RDLK N+LLD + K++DFG + G+ G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELF 184
Query: 213 KTGQLT-LKSDVYSFGVVLLEILSGRKAVD 241
+ + + DV+S GV+L ++SG D
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHP 91
F LLG+G FG+V ++ + A+K L + + E L E +L HP
Sbjct: 9 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 92 NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
L L D+ V EY G + HL ++ + A L+YL
Sbjct: 69 FLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVSALDYL 124
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
H + V+YRDLK N++LD+ H K++DFGL K G + D + GT Y APE
Sbjct: 125 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FCGTPEYLAPEV 180
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGR 237
+ D + GVV+ E++ GR
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSL 87
+F LLG+G FG+V ++ + A+K L + + E + E +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAAR 146
HP L L D+ V EY G + HL ++ + R + A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVS 116
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
LEYLH + V+YRD+K N++LD+ H K++DFGL K G + D + GT Y
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FCGTPEY 171
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGR 237
APE + D + GVV+ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 89 HHPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+HP LV L C + RL V EY+ G + H+ ++ L +A +
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLA 133
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGY 206
L YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNY 187
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 241
APE + D ++ GV++ E+++GR D
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV--EVLMLSLLHH 90
++F+ +LGEG F + +++ AIK L+ R+ ++ N+ V E ++S L H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P V L D ++ Y G + ++ + D A LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS----FDETCTRFYTAEIVSALEY 145
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH K +I+RDLK NILL+ H +++DFG AK+ + +GT Y +PE
Sbjct: 146 LHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
SD+++ G ++ ++++G
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 89 HHPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+HP LV L C + RL V EY+ G + H+ ++ L +A +
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLA 165
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGY 206
L YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 166 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNY 219
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVD 241
APE + D ++ GV++ E+++GR D
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 89 HHPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+HP LV L C + RL V EY+ G + H+ ++ L +A +
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLA 118
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGY 206
L YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDT 242
APE + D ++ GV++ E+++GR D
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF-LVEV---LMLSLLH 89
++F ++G G + +V L+ ++ A+K + + V + + V+ + +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 90 HPNLVNLIGYCADGDQRLL-VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
HP LV L C + RL V EY+ G + H+ ++ L +A + L
Sbjct: 69 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEISLAL 123
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYC 207
YLH++ +IYRDLK N+LLD H KL+D+G+ K G GD T + GT Y
Sbjct: 124 NYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 177
Query: 208 APEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDT 242
APE + D ++ GV++ E+++GR D
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV-QGNREFLV-EVLMLSLLHHPNLVNLIGY 99
+G G +GR K +S + + K+LD + + ++ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 100 CADGDQRLL--VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK- 156
D L V EY G + + + ++ LD +++ L+ H ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 157 -PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
V++RDLK +N+ LD + KL DFGLA++ + +T + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRM 191
Query: 216 QLTLKSDVYSFGVVLLEILS 235
KSD++S G +L E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 201
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 201
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQ 96
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 97 AVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 152
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 153 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 201
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 202
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V +E L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKEIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + +++DFGLAK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV-QGNREFLV-EVLMLSLLHHPNLVNLIGY 99
+G G +GR K +S + + K+LD + + ++ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 100 CADGDQRLL--VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK- 156
D L V EY G + + + ++ LD +++ L+ H ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 157 -PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
V++RDLK +N+ LD + KL DFGLA++ + +T + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRM 191
Query: 216 QLTLKSDVYSFGVVLLEILS 235
KSD++S G +L E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESIN--QDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 145
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 194
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY P G + HL + +P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+++D+ + K++DFG AK V R GT
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGT 202
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 202
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESINQD--VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 133
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 190
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 191 FTSASDVWMFGVCMWEIL 208
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 16/217 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNG-VQGN--REFLVEVLMLSLLHHPNLVNLIG 98
+G+G FG+V + A+K +++ V+ N R E+ ++ L HP LVNL
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D + +V + + G + HL K+ T L+YL ++
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKE----ETVKLFICELVMALDYLQNQR--- 135
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA---KTG 215
+I+RD+K NILLD H ++DF +A + P T ++T + GT Y APE K
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITT-MAGTKPYMAPEMFSSRKGA 192
Query: 216 QLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLV 252
+ D +S GV E+L GR+ + + + +V
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV 229
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 97
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 153
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 154 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 202
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESIN--QDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 30 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 89
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 90 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVL 145
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 146 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 194
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLS 86
A F LG G FGRV + A+K LD+ V ++ L E +L
Sbjct: 58 TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQ 117
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVL 173
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GT 203
EYLH +IYRDLK N+L+D+ + +++DFG AK V R GT
Sbjct: 174 TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGT 222
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESINQD--VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 134
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 135 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESINQD--VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 136
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 137 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESINQD--VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 128
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 186 FTSASDVWMFGVCMWEIL 203
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F +G G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTIGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + K++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 16/200 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQ--GNREFLVEVLMLSLLHHPNLVNLIGY 99
LG G +G V + + + AIK + + V N + L EV +L LL HPN++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
D LV E G + D + + + I G+ YLH K +
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEI----IHRMKFNEVDAAVIIKQVLSGVTYLH---KHNI 157
Query: 160 IYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
++RDLK N+LL ++ K+ DFGL+ V +N +GT Y APE + +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKKMKERLGTAYYIAPEVLRK-K 213
Query: 217 LTLKSDVYSFGVVLLEILSG 236
K DV+S GV+L +L+G
Sbjct: 214 YDEKCDVWSIGVILFILLAG 233
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 152
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
EYLH +IYRDLK N+L+D+ + +++DFG AK V T + GT
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWT---LCGTPE 204
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESINQD--VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 159
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 160 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 40/277 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL-DRNGVQGNRE-FLVEVLMLSLLHHPNLVNLIGY 99
+G G F VYKG +VA +L DR + R+ F E L L HPN+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 100 ---CADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPL--DWNTRMKIAAGAARGLEYLHD 153
G + + LV E G+++ +L K + W ++ +GL++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHT 147
Query: 154 KAKPPVIYRDLKCSNILLDRGY-HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+ PP+I+RDLKC NI + K+ D GLA L + V+GT + APE
Sbjct: 148 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXY 202
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAE--QSLVAWARPLFQDRTRHSLIAD 270
+ + DVY+FG LE + + AA+ + + + +P D+ +A
Sbjct: 203 EE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDK-----VAI 256
Query: 271 PELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVV 307
PE++ + C+ + D R I D++
Sbjct: 257 PEVK------------EIIEGCIRQNKDERYSIKDLL 281
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESINQD--VAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 152
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 201
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 23 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 81
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 82 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 137
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
EYLH +IYRDLK N+L+D+ + +++DFG AK V T + GT
Sbjct: 138 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWT---LCGTPE 189
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE + D ++ GV++ E+ +G
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESIN--QDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 568
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 569 FTSASDVWMFGVCMWEIL 586
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+P G + HL + +P + R AA
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIV 152
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 201
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 119/278 (42%), Gaps = 31/278 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL--DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+GEG +G V+K Q VAIK+ + + L E+ ML L HPNLVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 100 CADGDQRLLVYEYMPLGSVEDH--LHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ LV+EY DH LH+L ++ + + I + + + H K
Sbjct: 71 FRRKRRLHLVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KH 121
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE-YAKTGQ 216
I+RD+K NIL+ + KL DFG A+L G + + V T Y +PE Q
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPELLVGDTQ 179
Query: 217 LTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ---------SLVAWARPLFQDRTRHSL 267
DV++ G V E+LSG + K+ +Q L+ + +F S
Sbjct: 180 YGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 268 IADPELQGQYP-----PRGFYQALAVAAMCVHEQPDMR 300
+ P+ + P P Y AL + C+H P R
Sbjct: 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESIN--QDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKG-YLESIN--QDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNLVNLI 97
+GEG FG V++G Y+ N VAIK RE FL E L + HP++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G + + ++ E LG + L K LD + + A + L YL K
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR-- 131
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV-STRVMGTYGYCAPEYAKTGQ 216
++RD+ N+L+ KL DFGL++ + D+T+ +++ + APE +
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 217 LTLKSDVYSFGVVLLEIL 234
T SDV+ FGV + EIL
Sbjct: 189 FTSASDVWMFGVCMWEIL 206
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + K++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + K++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + S + VA+K++D Q EV+++ H N+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKA 155
GD+ +V E++ G++ D + +TRM +IAA + L LH +
Sbjct: 219 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
VI+RD+K +ILL KLSDFG V ++GT + APE
Sbjct: 268 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRL 322
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ D++S G++++E++ G
Sbjct: 323 PYGPEVDIWSLGIMVIEMVDG 343
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 105/246 (42%), Gaps = 22/246 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFL-VEVLMLSLLHHPNLVNLIGYC 100
LG G FG V+ S + IK ++++ Q E + E+ +L L HPN++ +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
D +V E G + + + K L ++ L Y H + V+
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 161 YRDLKCSNILL-DRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
++DLK NIL D H K+ DFGLA+L ++ ST GT Y APE K +
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMAPEVFKR-DV 202
Query: 218 TLKSDVYSFGVVLLEILSG--------RKAVDTSKAAAEQSLVAWARPLFQ---DRTRHS 266
T K D++S GVV+ +L+G + V E + RPL D +
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQM 262
Query: 267 LIADPE 272
L DPE
Sbjct: 263 LTKDPE 268
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVLMLS 86
A + ++ + +LG+G FG V + Q+ A+K + + V+ + L EV +L
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L + D LV E G + D + +K +I
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLS 137
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR---- 199
G+ Y+H K +++RDLK N+LL+ + + ++ DFGL+ TH
Sbjct: 138 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMK 186
Query: 200 -VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+GT Y APE G K DV+S GV+L +LSG
Sbjct: 187 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 31/228 (13%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
+F+ L+G GGFG+V+K + IK++ N + R EV L+ L H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 95 NLIGYCADGDQR-----------------LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTR 137
+ G C DG + E+ G++E + K LD
Sbjct: 68 HYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK--LDKVLA 124
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
+++ +G++Y+H K +I RDLK SNI L K+ DFGL N
Sbjct: 125 LELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDGKR 178
Query: 198 TRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTSK 244
R GT Y +PE + + D+Y+ G++L E+L A +TSK
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK 226
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVLMLS 86
A + ++ + +LG+G FG V + Q+ A+K + + V+ + L EV +L
Sbjct: 45 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L + D LV E G + D + +K +I
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLS 160
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR---- 199
G+ Y+H K +++RDLK N+LL+ + + ++ DFGL+ TH
Sbjct: 161 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMK 209
Query: 200 -VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+GT Y APE G K DV+S GV+L +LSG
Sbjct: 210 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVLMLS 86
A + ++ + +LG+G FG V + Q+ A+K + + V+ + L EV +L
Sbjct: 46 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L + D LV E G + D + +K +I
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLS 161
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR---- 199
G+ Y+H K +++RDLK N+LL+ + + ++ DFGL+ TH
Sbjct: 162 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMK 210
Query: 200 -VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+GT Y APE G K DV+S GV+L +LSG
Sbjct: 211 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGV-QGNREFLV-EVLMLSLLHHPNLVNLIGY 99
+G G +GR K +S + + K+LD + + ++ LV EV +L L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 100 CADGDQRLL--VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK- 156
D L V EY G + + + ++ LD +++ L+ H ++
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 157 -PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
V++RDLK +N+ LD + KL DFGLA++ + + + +GT Y +PE
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRM 191
Query: 216 QLTLKSDVYSFGVVLLEILS 235
KSD++S G +L E+ +
Sbjct: 192 SYNEKSDIWSLGCLLYELCA 211
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 94/211 (44%), Gaps = 15/211 (7%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVE-VLMLS 86
A +F ++G+G FG+V ++ A+K L + + +E + E ++L
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI-AAGAA 145
+ HP LV L D+ V +Y+ G + HL +P R + AA A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-----RARFYAAEIA 149
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
L YLH ++YRDLK NILLD H L+DFGL K + N+ ST GT
Sbjct: 150 SALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNSTTST-FCGTPE 204
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE D + G VL E+L G
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHH--PNLVNLIGY 99
+G G G+V+K +A+KQ+ R+G + + ++ L + L H P +V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
+ E M G+ + L G P +M +A + L YL K K V
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAI--VKALYYL--KEKHGV 146
Query: 160 IYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT- 218
I+RD+K SNILLD KL DFG++ G + D+ R G Y APE T
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGIS--GRLVDD-KAKDRSAGCAAYMAPERIDPPDPTK 203
Query: 219 ----LKSDVYSFGVVLLEILSGRKAVDTSKAAAE 248
+++DV+S G+ L+E+ +G+ K E
Sbjct: 204 PDYDIRADVWSLGISLVELATGQFPYKNCKTDFE 237
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 36 FRSESLLGEGGFGRVY------KGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
F +LG GGFG V+ G L + + + R G QG +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVH 243
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
+V+L LV M G + H++++ + A GLE
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+LH + +IYRDLK N+LLD + ++SD GLA G + GT G+ AP
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGR 237
E + D ++ GV L E+++ R
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 36 FRSESLLGEGGFGRVY------KGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
F +LG GGFG V+ G L + + + R G QG +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVH 243
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
+V+L LV M G + H++++ + A GLE
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+LH + +IYRDLK N+LLD + ++SD GLA G + GT G+ AP
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGR 237
E + D ++ GV L E+++ R
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + S + VA+K++D Q EV+++ H N+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKA 155
GD+ +V E++ G++ D + +TRM +IAA + L LH +
Sbjct: 97 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
VI+RD+K +ILL KLSDFG V ++GT + APE
Sbjct: 146 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRL 200
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ D++S G++++E++ G
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDG 221
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY P G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + +++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 36 FRSESLLGEGGFGRVY------KGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
F +LG GGFG V+ G L + + + R G QG +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVH 243
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
+V+L LV M G + H++++ + A GLE
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+LH + +IYRDLK N+LLD + ++SD GLA G + GT G+ AP
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGR 237
E + D ++ GV L E+++ R
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LG+G FG VY + + VA+K Q+++ GV+ + E+ + + LHHPN++ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAHLHHPNILRL 88
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
Y D + L+ EY P G + L D I A L Y H K
Sbjct: 89 YNYFYDRRRIYLILEYAPRGELYKELQKSC----TFDEQRTATIMEELADALMYCHGKK- 143
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
VI+RD+K N+LL K++DFG + P + + GT Y PE +
Sbjct: 144 --VIHRDIKPENLLLGLKGELKIADFGWSVHAP----SLRRKTMCGTLDYLPPEMIEGRM 197
Query: 217 LTLKSDVYSFGVVLLEILSGRKAVDTS 243
K D++ GV+ E+L G +++
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESA 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + S + VA+K++D Q EV+++ H N+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKA 155
GD+ +V E++ G++ D + +TRM +IAA + L LH +
Sbjct: 142 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
VI+RD+K +ILL KLSDFG V ++GT + APE
Sbjct: 191 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRL 245
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ D++S G++++E++ G
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDG 266
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVLMLS 86
A + ++ + +LG+G FG V + Q+ A+K + + V+ + L EV +L
Sbjct: 28 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN++ L + D LV E G + D + +K +I
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLS 143
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR---- 199
G+ Y+H K +++RDLK N+LL+ + + ++ DFGL+ TH
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKMK 192
Query: 200 -VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+GT Y APE G K DV+S GV+L +LSG
Sbjct: 193 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E + ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY P G + HL + +P + R AA EYLH
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 162
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + K++DFG AK V R GT Y APE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P L L D +V EY P G + HL + +P + R AA
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 152
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + K++DFG AK V R G
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 36 FRSESLLGEGGFGRVY------KGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH 89
F +LG GGFG V+ G L + + + R G QG +VE +L+ +H
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA---MVEKKILAKVH 243
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
+V+L LV M G + H++++ + A GLE
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+LH + +IYRDLK N+LLD + ++SD GLA G + GT G+ AP
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAP 358
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGR 237
E + D ++ GV L E+++ R
Sbjct: 359 ELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + S + VA+K++D Q EV+++ H N+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKA 155
GD+ +V E++ G++ D + +TRM +IAA + L LH +
Sbjct: 99 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
VI+RD+K +ILL KLSDFG V ++GT + APE
Sbjct: 148 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRL 202
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ D++S G++++E++ G
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDG 223
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P L L D +V EY P G + HL + +P + R AA
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIV 152
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + K++DFG AK V R G
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 38 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P L L D +V EY P G + HL + +P + R AA
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQIV 152
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+++D+ + K++DFG AK V R G
Sbjct: 153 LTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCG 201
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 202 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 104/241 (43%), Gaps = 44/241 (18%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
+F+ L+G GGFG+V+K + I+++ N + RE V L+ L H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 95 NLIGYCADG--------DQRLLVYEYMP----------------------LGSVEDHLHD 124
+ G C DG D L +Y P G++E +
Sbjct: 69 HYNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 125 LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGL 184
K LD +++ +G++Y+H K +I+RDLK SNI L K+ DFGL
Sbjct: 128 RRGEK--LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 185 AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS-GRKAVDTS 243
N TR GT Y +PE + + D+Y+ G++L E+L A +TS
Sbjct: 183 V---TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS 239
Query: 244 K 244
K
Sbjct: 240 K 240
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 16/205 (7%)
Query: 42 LGEGGFGRVYKGYLESI-------NQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
LG+G F +++KG + +V +K LD+ + F M+S L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C GD+ +LV E++ GS++ + L K ++ ++++A A + +L +
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAAAMHFLEEN 132
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYA 212
+I+ ++ NILL R K + KL G + V + + + PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 213 KTGQ-LTLKSDVYSFGVVLLEILSG 236
+ + L L +D +SFG L EI SG
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + S + VA+K++D Q EV+++ H N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKA 155
GD+ +V E++ G++ D + +TRM +IAA + L LH +
Sbjct: 88 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
VI+RD+K +ILL KLSDFG V ++GT + APE
Sbjct: 137 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRL 191
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ D++S G++++E++ G
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDG 212
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G +G V++G + ++VA+K R+ RE E+ +L H N++ I
Sbjct: 16 VGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 71
Query: 101 A----DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH---- 152
Q L+ Y +GS+ D+L + LD + ++I A GL +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 153 -DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTY 204
+ KP + +RDLK NIL+ + ++D GLA + VG+N V GT
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 181
Query: 205 GYCAPEYA-KTGQLTL-----KSDVYSFGVVLLEI 233
Y APE +T Q+ + D+++FG+VL E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + S + VA+K++D Q EV+++ H N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM---KIAA---GAARGLEYLHDKA 155
GD+ +V E++ G++ D + +TRM +IAA + L LH +
Sbjct: 92 VGDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
VI+RD+K +ILL KLSDFG V ++GT + APE
Sbjct: 141 ---VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRL 195
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ D++S G++++E++ G
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDG 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 37/215 (17%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G +G V++G + ++VA+K R+ RE E+ +L H N++ I
Sbjct: 16 VGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 71
Query: 101 A----DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH---- 152
Q L+ Y +GS+ D+L + LD + ++I A GL +LH
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTT-----LDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 153 -DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTY 204
+ KP + +RDLK NIL+ + ++D GLA + VG+N V GT
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 181
Query: 205 GYCAPEYA-KTGQLTL-----KSDVYSFGVVLLEI 233
Y APE +T Q+ + D+++FG+VL E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 37/215 (17%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G +G V++G + ++VA+K R+ RE E+ +L H N++ I
Sbjct: 45 VGKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASD 100
Query: 101 A----DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH---- 152
Q L+ Y +GS+ D+L LD + ++I A GL +LH
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 153 -DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTY 204
+ KP + +RDLK NIL+ + ++D GLA + VG+N V GT
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTK 210
Query: 205 GYCAPEYA-KTGQLTL-----KSDVYSFGVVLLEI 233
Y APE +T Q+ + D+++FG+VL E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 42/288 (14%)
Query: 42 LGEGGFGRVYKGYLESI-------NQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
LG+G F +++KG + +V +K LD+ + F M+S L H +LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
G C GD+ +LV E++ GS++ + L K ++ ++++A A + +L +
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTY---LKKNKNCINILWKLEVAKQLAWAMHFLEEN 132
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR--VMGTYGYCAPEYA 212
+I+ ++ NILL R K + KL G + V + + + PE
Sbjct: 133 T---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 213 KTGQ-LTLKSDVYSFGVVLLEILSG----RKAVDTSKAAAEQSLVAWARPLFQDRTRHSL 267
+ + L L +D +SFG L EI SG A+D+ + ++DR
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ----------FYEDR----- 234
Query: 268 IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLAS 315
Q P + + C+ +PD RP ++ L L +
Sbjct: 235 -------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+LG G FG+V+K + +A K + G++ E E+ +++ L H NL+ L
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF 155
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ +LV EY+ G + D + D S LD MK G+ ++H + ++
Sbjct: 156 ESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMH---QMYIL 209
Query: 161 YRDLKCSNIL-LDR-GYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
+ DLK NIL ++R K+ DFGLA+ + V+ GT + APE ++
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVS 266
Query: 219 LKSDVYSFGVVLLEILSG 236
+D++S GV+ +LSG
Sbjct: 267 FPTDMWSVGVIAYMLLSG 284
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD--RNGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+GEG FG+ + IK+++ R + E EV +L+ + HPN+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHD----LSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
+ +V +Y G + ++ L + LDW ++ +A L+++HD+
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRK 145
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
+++RD+K NI L + +L DFG+A++ + ++ +GT Y +PE +
Sbjct: 146 ---ILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLSPEICENK 200
Query: 216 QLTLKSDVYSFGVVLLEILSGRKAVD 241
KSD+++ G VL E+ + + A +
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 27/218 (12%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVLMLS 86
A + ++ + +LG+G FG V + Q+ A+K + + V+ + L EV +L
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
L HPN+ L + D LV E G + D + +K +I
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLS 137
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR---- 199
G+ Y H K +++RDLK N+LL+ + + ++ DFGL+ TH
Sbjct: 138 GITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEASKKXK 186
Query: 200 -VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+GT Y APE G K DV+S GV+L +LSG
Sbjct: 187 DKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LG+G FG VY + +A+K QL++ GV+ + E+ + S L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
Y D + L+ E+ P G + L G+ D A L Y H++
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQ--KHGR--FDEQRSATFMEELADALHYCHERK- 134
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAKTG 215
VI+RD+K N+L+ K++DFG + P + R M GT Y PE +
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 216 QLTLKSDVYSFGVVLLEILSGRKAVDT 242
K D++ GV+ E L G D+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LG+G FG VY + +A+K QL++ GV+ + E+ + S L HPN++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 79
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
Y D + L+ E+ P G + L G+ D A L Y H++
Sbjct: 80 YNYFHDRKRIYLMLEFAPRGELYKELQ--KHGR--FDEQRSATFMEELADALHYCHERK- 134
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAKTG 215
VI+RD+K N+L+ K++DFG + P + R M GT Y PE +
Sbjct: 135 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 187
Query: 216 QLTLKSDVYSFGVVLLEILSGRKAVDT 242
K D++ GV+ E L G D+
Sbjct: 188 THDEKVDLWCAGVLCYEFLVGMPPFDS 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIK-----QLDRNGVQGNREFLVEVLMLSLLHHPNLVNL 96
LG+G FG VY + +A+K QL++ GV+ + E+ + S L HPN++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRM 80
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
Y D + L+ E+ P G + L G+ D A L Y H++
Sbjct: 81 YNYFHDRKRIYLMLEFAPRGELYKELQ--KHGR--FDEQRSATFMEELADALHYCHERK- 135
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM-GTYGYCAPEYAKTG 215
VI+RD+K N+L+ K++DFG + P + R M GT Y PE +
Sbjct: 136 --VIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIEGK 188
Query: 216 QLTLKSDVYSFGVVLLEILSGRKAVDT 242
K D++ GV+ E L G D+
Sbjct: 189 THDEKVDLWCAGVLCYEFLVGMPPFDS 215
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV-EVLMLSLLH 89
AT + + +G G +G VYK VA+K + NG +G V EV +L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 90 ---HPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIA 141
HPN+V L+ CA D+ + LV+E++ + +L P P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKDLM 118
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
RGL++LH +++RDLK NIL+ G KL+DFGLA+ + V+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAPVV 172
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
T Y APE D++S G + E+ RK + + A+Q
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD---RNGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
LG+G +G V+K + VA+K++ +N R F +++ L H N+VNL+
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 99 YC-ADGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
AD D+ + LV++YM E LH + L+ + + + ++YLH
Sbjct: 77 VLRADNDRDVYLVFDYM-----ETDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG------------PVGDNTH-------VS 197
+++RD+K SNILL+ H K++DFGL++ + +NT +
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 198 TRVMGTYGYCAPEY-AKTGQLTLKSDVYSFGVVLLEILSGR 237
T + T Y APE + + T D++S G +L EIL G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR---VMGTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R + GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 182
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
+IYRDLK N+L+D+ + +++DFG AK T + GT Y APE +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILSKGYN 237
Query: 219 LKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 238 KAVDWWALGVLIYEMAAG 255
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL-DRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G +G V+ G + VA+K RE E+ L+ H N++ I
Sbjct: 45 IGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAAD 100
Query: 101 ADGD----QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD--- 153
G Q L+ +Y GS+ D+L + LD + +K+A + GL +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT-----LDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 154 --KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV----STRVMGTYGYC 207
+ KP + +RDLK NIL+ + ++D GLA + + D V +TRV GT Y
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRV-GTKRYM 213
Query: 208 APEYAKTG------QLTLKSDVYSFGVVLLEI 233
PE Q + +D+YSFG++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 36 FRSESLLGEGGFGRVY---KGYLESINQDVAIKQLDRNGVQGNRE----FLVEVLMLSLL 88
F +LG+GG+G+V+ K + + A+K L + + N + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 89 HHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
HP +V+LI G + L+ EY+ G + L + +T A + L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMAL 134
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
+LH K +IYRDLK NI+L+ H KL+DFGL K + D T V+ GT Y A
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHXFCGTIEYMA 189
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILSG 236
PE D +S G ++ ++L+G
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 110 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 162
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 214
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 16/208 (7%)
Query: 36 FRSESLLGEGGFGRVY---KGYLESINQDVAIKQLDRNGVQGNRE----FLVEVLMLSLL 88
F +LG+GG+G+V+ K + + A+K L + + N + E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 89 HHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
HP +V+LI G + L+ EY+ G + L + +T A + L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMAL 134
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
+LH K +IYRDLK NI+L+ H KL+DFGL K + D T V+ GT Y A
Sbjct: 135 GHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHTFCGTIEYMA 189
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILSG 236
PE D +S G ++ ++L+G
Sbjct: 190 PEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 30 AAATKNFRSESLLGEGGFGRVY-KGYLESINQDVAIKQLDRNGVQGNREF---LVEVLML 85
A F LG G FGRV ++E+ N A+K LD+ V ++ L E +L
Sbjct: 37 TAHLDQFERIKTLGTGSFGRVMLVKHMETGNH-YAMKILDKQKVVKLKQIEHTLNEKRIL 95
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
++ P LV L D +V EY+ G + HL + +P + R AA
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIV 151
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---G 202
EYLH +IYRDLK N+L+D+ + +++DFG AK V R G
Sbjct: 152 LTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCG 200
Query: 203 TYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
T Y APE + D ++ GV++ E+ +G
Sbjct: 201 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 7/199 (3%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLVNLIGYC 100
+GEG +G V Y VAIK++ Q + L E+ +L H N++ +
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+ Y+ +E L+ L ++ L + RGL+Y+H V+
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIHSAN---VL 166
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
+RDLK SN+L++ K+ DFGLA++ P D+T T + T Y APE +
Sbjct: 167 HRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYT 226
Query: 220 KS-DVYSFGVVLLEILSGR 237
KS D++S G +L E+LS R
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV-EVLMLSLLH 89
AT + + +G G +G VYK VA+K + NG +G V EV +L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 90 ---HPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIA 141
HPN+V L+ CA D+ + LV+E++ + +L P P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKDLM 118
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
RGL++LH +++RDLK NIL+ G KL+DFGLA+ + V+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDPVV 172
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
T Y APE D++S G + E+ RK + + A+Q
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 104/228 (45%), Gaps = 20/228 (8%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLV-EVLMLSLLH 89
AT + + +G G +G VYK VA+K + NG +G V EV +L L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 90 ---HPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIA 141
HPN+V L+ CA D+ + LV+E++ + +L P P + T +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--TIKDLM 118
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
RGL++LH +++RDLK NIL+ G KL+DFGLA+ + V+
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFPVV 172
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
T Y APE D++S G + E+ RK + + A+Q
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 219
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V++ + + A K + E+ +S+L HP LVNL
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
D ++ +++YE+M G + + + D + + ++ +GL ++H+ ++
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 278
Query: 162 RDLKCSNILL--DRGYHPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
DLK NI+ R KL DFGL A L P + V+T GT + APE A+ +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTT---GTAEFAAPEVAEGKPVG 334
Query: 219 LKSDVYSFGVVLLEILSG 236
+D++S GV+ +LSG
Sbjct: 335 YYTDMWSVGVLSYILLSG 352
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 103
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 104 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LD 156
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 157 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 208
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 209 GYNKAVDWWALGVLIYEMAAG 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 130 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLHS---LD 182
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 234
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 235 GYNKAVDWWALGVLIYEMAAG 255
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V++ + + A K + E+ +S+L HP LVNL
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
D ++ +++YE+M G + + + D + + ++ +GL ++H+ ++
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVH 172
Query: 162 RDLKCSNILL--DRGYHPKLSDFGL-AKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
DLK NI+ R KL DFGL A L P + V+T GT + APE A+ +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDP-KQSVKVTT---GTAEFAAPEVAEGKPVG 228
Query: 219 LKSDVYSFGVVLLEILSG 236
+D++S GV+ +LSG
Sbjct: 229 YYTDMWSVGVLSYILLSG 246
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 26/235 (11%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEV---LMLSL 87
A +R LLG+GGFG V+ G+ + VAIK + RN V G V L ++L
Sbjct: 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVAL 87
Query: 88 LH-------HPNLVNLIGYCADGDQRLLVYEY-MPLGSVEDHLHDLSPGKKPLDWNTRMK 139
L HP ++ L+ + + +LV E +P + D++ + K PL
Sbjct: 88 LWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRC 143
Query: 140 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVS 197
+++ H + V++RD+K NIL+D RG KL DFG L + D +
Sbjct: 144 FFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA-KLIDFGSGAL--LHDEPY-- 195
Query: 198 TRVMGTYGYCAPEYAKTGQL-TLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSL 251
T GT Y PE+ Q L + V+S G++L +++ G + + E L
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+++D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIIISK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 96/178 (53%), Gaps = 17/178 (9%)
Query: 85 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 140
L +LH N ++G+ +DG+ + + E+M GS++ L + K + K+
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLKE----AKRIPEEILGKV 119
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
+ RGL YL +K + +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 120 SIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 173
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPL 258
+GT Y APE + +++SD++S G+ L+E+ GR + A +++ + RP+
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI--FGRPV 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR---EFLVEVLMLSLLHHPNLVNLIG 98
LG G FG+V G + VA+K L+R ++ + E+ L L HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ +V EY+ G + D++ G+ ++ ++ ++Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI--CKHGR--VEEMEARRLFQQILSAVDYCH---RHM 131
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
V++RDLK N+LLD + K++DFGL+ + G+ S G+ Y APE +G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLY 187
Query: 219 L--KSDVYSFGVVLLEILSGRKAVD 241
+ D++S GV+L +L G D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 95
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 96 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 148
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D + +++DFG AK V R GT Y APE +
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 200
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 201 GYNKAVDWWALGVLIYEMAAG 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 23/233 (9%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-----EVLM 84
+ AT + + +G G +G VYK VA+K + G L EV +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 85 LSLLH---HPNLVNLIGYCADG--DQRL---LVYEYMPLGSVEDHLHDLSPGKKPLDWNT 136
L L HPN+V L+ CA D+ + LV+E++ + +L P P + T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAE--T 121
Query: 137 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 196
+ RGL++LH +++RDLK NIL+ G KL+DFGLA+ +
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMA 175
Query: 197 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
T V+ T Y APE D++S G + E+ RK + + A+Q
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQ 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+GEG G V + + VA+K +D Q EV+++ H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
G++ ++ E++ G++ D + + ++ + + + L YLH + VI+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQI-----ATVCEAVLQALAYLHAQG---VIH 164
Query: 162 RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS 221
RD+K +ILL KLSDFG + + ++GT + APE +
Sbjct: 165 RDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 222 DVYSFGVVLLEILSG 236
D++S G++++E++ G
Sbjct: 223 DIWSLGIMVIEMVDG 237
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G FG V++G ++VA+K R RE E+ +L H N++ I
Sbjct: 12 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 65
Query: 101 ADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-- 152
AD Q LV +Y GS+ D+L+ + + + +K+A A GL +LH
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 120
Query: 153 ---DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYC 207
+ KP + +RDLK NIL+ + ++D GLA + D ++ +GT Y
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 208 APEY------AKTGQLTLKSDVYSFGVVLLEI 233
APE K + ++D+Y+ G+V EI
Sbjct: 181 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y APE +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ ++ +G
Sbjct: 214 GYNKAVDWWALGVLIYQMAAG 234
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G FG V++G ++VA+K R RE E+ +L H N++ I
Sbjct: 11 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 64
Query: 101 ADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-- 152
AD Q LV +Y GS+ D+L+ + + + +K+A A GL +LH
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 119
Query: 153 ---DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYC 207
+ KP + +RDLK NIL+ + ++D GLA + D ++ +GT Y
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 208 APEY------AKTGQLTLKSDVYSFGVVLLEI 233
APE K + ++D+Y+ G+V EI
Sbjct: 180 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G FG V++G ++VA+K R RE E+ +L H N++ I
Sbjct: 17 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 70
Query: 101 ADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-- 152
AD Q LV +Y GS+ D+L+ + + + +K+A A GL +LH
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 125
Query: 153 ---DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYC 207
+ KP + +RDLK NIL+ + ++D GLA + D ++ +GT Y
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 208 APEY------AKTGQLTLKSDVYSFGVVLLEI 233
APE K + ++D+Y+ G+V EI
Sbjct: 186 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G FG V++G ++VA+K R RE E+ +L H N++ I
Sbjct: 14 IGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 67
Query: 101 ADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-- 152
AD Q LV +Y GS+ D+L+ + + + +K+A A GL +LH
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 122
Query: 153 ---DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYC 207
+ KP + +RDLK NIL+ + ++D GLA + D ++ +GT Y
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 208 APEY------AKTGQLTLKSDVYSFGVVLLEI 233
APE K + ++D+Y+ G+V EI
Sbjct: 183 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L+HPN+V L+ ++ LV+E++ + ++D + + PL +G
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQL--LQG 117
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L + H V++RDLK N+L++ KL+DFGLA+ V T+ V T Y
Sbjct: 118 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 172
Query: 208 APEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
APE + + D++S G + E+++ R
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
+GEG +G VYK +S + VA+K++ + G+ + E+ +L LHHPN+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLI 85
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA-GAARGLEYLHDKAK 156
LV+E+M E L + K ++++KI RG+ + H
Sbjct: 86 DVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVSTRVMGTYGYCAPEYAK- 213
+++RDLK N+L++ KL+DFGLA+ G PV TH T Y AP+
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMG 193
Query: 214 TGQLTLKSDVYSFGVVLLEILSGR 237
+ + + D++S G + E+++G+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
+GEG +G VYK +S + VA+K++ + G+ + E+ +L LHHPN+V+LI
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKELHHPNIVSLI 85
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA-GAARGLEYLHDKAK 156
LV+E+M E L + K ++++KI RG+ + H
Sbjct: 86 DVIHSERCLTLVFEFM-----EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR- 139
Query: 157 PPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVSTRVMGTYGYCAPEYAK- 213
+++RDLK N+L++ KL+DFGLA+ G PV TH T Y AP+
Sbjct: 140 --ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPDVLMG 193
Query: 214 TGQLTLKSDVYSFGVVLLEILSGR 237
+ + + D++S G + E+++G+
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G FG V++G ++VA+K R RE E+ +L H N++ I
Sbjct: 37 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 90
Query: 101 ADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-- 152
AD Q LV +Y GS+ D+L+ + + + +K+A A GL +LH
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 145
Query: 153 ---DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYC 207
+ KP + +RDLK NIL+ + ++D GLA + D ++ +GT Y
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 208 APEY------AKTGQLTLKSDVYSFGVVLLEI 233
APE K + ++D+Y+ G+V EI
Sbjct: 206 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 15/211 (7%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L+HPN+V L+ ++ LV+E++ + ++D + + PL +G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQL--LQG 118
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L + H V++RDLK N+L++ KL+DFGLA+ V T+ V T Y
Sbjct: 119 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 173
Query: 208 APEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
APE + + D++S G + E+++ R
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 142
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 142
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 31/212 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G FG V++G ++VA+K R RE E+ +L H N++ I
Sbjct: 50 IGKGRFGEVWRGKWR--GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIA-- 103
Query: 101 ADGD------QRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH-- 152
AD Q LV +Y GS+ D+L+ + + + +K+A A GL +LH
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHME 158
Query: 153 ---DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVS-TRVMGTYGYC 207
+ KP + +RDLK NIL+ + ++D GLA + D ++ +GT Y
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 208 APEY------AKTGQLTLKSDVYSFGVVLLEI 233
APE K + ++D+Y+ G+V EI
Sbjct: 219 APEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 29 LAAATKNFRSESLLGEGGFGRVYKGY-LESINQDVAIKQLD-RNGVQGN-----REFLVE 81
L A + + + +GEG +G+V+K L++ + VA+K++ + G +G RE V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 82 VLMLSLLHHPNLVNLIGYCA----DGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNT 136
+ L HPN+V L C D + +L LV+E++ + +L + P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--T 121
Query: 137 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 196
+ RGL++LH V++RDLK NIL+ KL+DFGLA+ +
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMA 175
Query: 197 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 234
T V+ T Y APE D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 104/234 (44%), Gaps = 49/234 (20%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
+F ++LG+G FG+V K ++ AIK++ R+ + L EV++L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 95 NLIGYCADGDQRLLV---------------YEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 139
Y A ++R V EY G++ D +H + ++ ++ +
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY---WR 120
Query: 140 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS-- 197
+ L Y+H + +I+RDLK NI +D + K+ DFGLAK N H S
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLD 171
Query: 198 ----------------TRVMGTYGYCAPEYAK-TGQLTLKSDVYSFGVVLLEIL 234
T +GT Y A E TG K D+YS G++ E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ + DL KK +D + I +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLSM--------DL---KKFMDASALTGIPLPLIKS 108
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 109 YLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 166 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ + DL KK +D + I +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSM--------DL---KKFMDASALTGIPLPLIKS 110
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 111 YLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 168 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 27 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 142
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 143 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG-NREFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 29 LAAATKNFRSESLLGEGGFGRVYKGY-LESINQDVAIKQLD-RNGVQGN-----REFLVE 81
L A + + + +GEG +G+V+K L++ + VA+K++ + G +G RE V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 82 VLMLSLLHHPNLVNLIGYCA----DGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNT 136
+ L HPN+V L C D + +L LV+E++ + +L + P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--T 121
Query: 137 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 196
+ RGL++LH V++RDLK NIL+ KL+DFGLA+ +
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMA 175
Query: 197 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 234
T V+ T Y APE D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 96/215 (44%), Gaps = 37/215 (17%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+G+G +G V++G + VA+K R+ RE E+ LL H N++ I
Sbjct: 16 VGKGRYGEVWRGLWHG--ESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASD 71
Query: 101 A----DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH---- 152
Q L+ Y GS+ D L ++ L+ + +++A AA GL +LH
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEIF 126
Query: 153 -DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGP-------VGDNTHVSTRVMGTY 204
+ KP + +RD K N+L+ ++D GLA + +G+N V GT
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-----GTK 181
Query: 205 GYCAPEYAKTGQLT------LKSDVYSFGVVLLEI 233
Y APE T +D+++FG+VL EI
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR---EFLVEVLMLSLLHHPNLVNLIG 98
LG G FG+V G + VA+K L+R ++ + E+ L L HP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ +V EY+ G + D++ G+ ++ ++ ++Y H +
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYI--CKHGR--VEEMEARRLFQQILSAVDYCH---RHM 131
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
V++RDLK N+LLD + K++DFGL+ + G+ S G+ Y APE +G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLY 187
Query: 219 L--KSDVYSFGVVLLEILSGRKAVD 241
+ D++S GV+L +L G D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 22/218 (10%)
Query: 29 LAAATKNFRSESLLGEGGFGRVYKGY-LESINQDVAIKQLD-RNGVQGN-----REFLVE 81
L A + + + +GEG +G+V+K L++ + VA+K++ + G +G RE V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAV- 64
Query: 82 VLMLSLLHHPNLVNLIGYCA----DGDQRL-LVYEYMPLGSVEDHLHDLSPGKKPLDWNT 136
+ L HPN+V L C D + +L LV+E++ + +L + P + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTE--T 121
Query: 137 RMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV 196
+ RGL++LH V++RDLK NIL+ KL+DFGLA+ +
Sbjct: 122 IKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMA 175
Query: 197 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 234
T V+ T Y APE D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 135/323 (41%), Gaps = 47/323 (14%)
Query: 18 QITAQTLTFRELAAATKNFRSESLLGEGGFGRVY-----------KGYLESINQDVAIKQ 66
++ LT +NF +LG G +G+V+ K Y + + I Q
Sbjct: 38 ELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ 97
Query: 67 LDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRL-LVYEYMPLGSVEDHLHDL 125
+ E V + + P LV L Y + +L L+ +Y+ G + HL
Sbjct: 98 KAKTTEHTRTERQV---LEHIRQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHL--- 150
Query: 126 SPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 185
S ++ + ++ + LE+LH K +IYRD+K NILLD H L+DFGL+
Sbjct: 151 SQRERFTEHEVQIYVGE-IVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Query: 186 KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS--DVYSFGVVLLEILSGRK--AVD 241
K V D T + GT Y AP+ + G D +S GV++ E+L+G VD
Sbjct: 207 K-EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
Query: 242 ---TSKAAAEQSLVAWARP-------LFQDRTRHSLIADPELQGQYPPRG--------FY 283
S+A + ++ P L +D + L+ DP+ + PR F+
Sbjct: 266 GEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325
Query: 284 QALAVAAMCVHEQPD-MRPVIAD 305
Q + + + P +PVI D
Sbjct: 326 QKINWDDLAAKKVPAPFKPVIRD 348
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 33 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 148
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 149 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 206 IMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 25 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 140
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 141 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L +E L+ L + L + RGL+Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYI 160
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
+IYRDLK N+L+D+ + +++DFG AK V R GT Y AP +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPAIILSK 213
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
D ++ GV++ E+ +G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 69 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 128
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 129 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 183
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 237
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAV 240
+ +++SD++S G+ L+E+ GR +
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+LG+G +G VY G S +AIK++ + ++ E+ + L H N+V +G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHD----LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
++ + E +P GS+ L L ++ + + T+ + GL+YLHD
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ- 142
Query: 157 PPVIYRDLKCSNILLDRGYHP--KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAK 213
+++RD+K N+L++ Y K+SDFG +K L + T T GT Y APE
Sbjct: 143 --IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIID 196
Query: 214 TGQLTL--KSDVYSFGVVLLEILSGR 237
G +D++S G ++E+ +G+
Sbjct: 197 KGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S + A K + + + +R E EV +L + HPN++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 29/205 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF---LVEVLMLSLLHHPNLVNLIG 98
LG G FGRV + A+K LD+ V ++ L E +L ++ P LV L
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
D +V EY+ G + HL + +P + R AA EYLH
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLHS---LD 161
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG-TYGYC------APEY 211
+IYRDLK N+L+D+ + +++DFG AK RV G T+ C APE
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAK------------RVKGRTWXLCGTPEALAPEI 209
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
+ D ++ GV++ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 139
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 140 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 139
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 140 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--- 146
HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYL 109
Query: 147 -----GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
GL + H V++RDLK N+L++ KL+DFGLA+ V T+ T +
Sbjct: 110 FQLLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEV 164
Query: 202 GTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T Y APE + + D++S G + E+++ R
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
+ + Y+ +E L+ L + L + RGL+Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSA 148
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAK 213
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 149 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 214 TGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
+ + Y+ +E L+ L + L + RGL+Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSA 149
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAK 213
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 150 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 214 TGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
+ + Y+ +E L+ L + L + RGL+Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSA 140
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAK 213
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 141 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 214 TGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 7/205 (3%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 95 NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
+ + Y+ +E L+ L + L + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSA 147
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEYAK 213
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 148 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 214 TGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G +G V Q VAIK++ + V + L E+ +L H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI--- 119
Query: 100 CADGDQRLLVY-----EYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
D + + Y Y+ L +E LH + +PL RGL+Y+H
Sbjct: 120 -KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYA 212
VI+RDLK SN+L++ K+ DFG+A+ ++ + T + T Y APE
Sbjct: 179 Q---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 213 KT-GQLTLKSDVYSFGVVLLEILSGRK 238
+ + T D++S G + E+L+ R+
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 108
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+ T
Sbjct: 109 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--TH 163
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
+ T Y APE + + D++S G + E+++ R
Sbjct: 164 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 67
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--- 146
HPN+V L+ ++ LV+E++ H DL KK +D + I +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-------H-QDL---KKFMDASALTGIPLPLIKSYL 116
Query: 147 -----GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
GL + H V++RDLK N+L++ KL+DFGLA+ V T+ T +
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEV 171
Query: 202 GTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T Y APE + + D++S G + E+++ R
Sbjct: 172 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 20/252 (7%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH 90
K + LG+GGF + Y+ + A K + ++ + + E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P++V G+ D D +V E S L +L +K + +G++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH+ VI+RDLK N+ L+ K+ DFGLA + + + GT Y APE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKXLCGTPNYIAPE 212
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQSLVAWARPLFQDR 262
+ + D++S G +L +L G+ +TS E S+ P+
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASAL 272
Query: 263 TRHSLIADPELQ 274
R L ADP L+
Sbjct: 273 IRRMLHADPTLR 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 22/253 (8%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH 90
K + LG+GGF + Y+ + A K + ++ + + E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P++V G+ D D +V E S L +L +K + +G++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAP 209
LH+ VI+RDLK N+ L+ K+ DFGLA K+ G+ + GT Y AP
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAP 211
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQSLVAWARPLFQD 261
E + + D++S G +L +L G+ +TS E S+ P+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA 271
Query: 262 RTRHSLIADPELQ 274
R L ADP L+
Sbjct: 272 LIRRMLHADPTLR 284
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 112
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 113 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 159 TY--THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKCQH-LSNDHICYFLYQILRGLKYIH 145
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 10/216 (4%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFL-VEVLMLSLLHHPN 92
K + +G GGF +V + VAIK +D+N + + + E+ L L H +
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQH 69
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
+ L ++ +V EY P G + D++ +S + + TR+ + + Y+H
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYI--ISQDRLSEE-ETRV-VFRQIVSAVAYVH 125
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+ +RDLK N+L D + KL DFGL P G+ + G+ Y APE
Sbjct: 126 SQGYA---HRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 213 K-TGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAA 247
+ L ++DV+S G++L ++ G D A
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMA 217
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 64
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--- 146
HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYL 113
Query: 147 -----GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
GL + H V++RDLK N+L++ KL+DFGLA+ V T+ T +
Sbjct: 114 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEV 168
Query: 202 GTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T Y APE + + D++S G + E+++ R
Sbjct: 169 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G +G V Q VAIK++ + V + L E+ +L H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI--- 118
Query: 100 CADGDQRLLVY-----EYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
D + + Y Y+ L +E LH + +PL RGL+Y+H
Sbjct: 119 -KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 155 AKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHVSTRVMGTYGYCAPEYA 212
VI+RDLK SN+L++ K+ DFG+A+ ++ + T + T Y APE
Sbjct: 178 Q---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 213 KT-GQLTLKSDVYSFGVVLLEILSGRK 238
+ + T D++S G + E+L+ R+
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 112
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 113 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 159 TY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 111
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 112 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 TY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 67
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--- 146
HPN+V L+ ++ LV+E++ H DL KK +D + I +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-------H-QDL---KKFMDASALTGIPLPLIKSYL 116
Query: 147 -----GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
GL + H V++RDLK N+L++ KL+DFGLA+ V T+ T +
Sbjct: 117 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEV 171
Query: 202 GTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T Y APE + + D++S G + E+++ R
Sbjct: 172 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 111
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 112 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 TY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 20/252 (7%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH 90
K + LG+GGF + Y+ + A K + ++ + + E+ + L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P++V G+ D D +V E S L +L +K + +G++Y
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH+ VI+RDLK N+ L+ K+ DFGLA + + + GT Y APE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPE 212
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQSLVAWARPLFQDR 262
+ + D++S G +L +L G+ +TS E S+ P+
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASAL 272
Query: 263 TRHSLIADPELQ 274
R L ADP L+
Sbjct: 273 IRRMLHADPTLR 284
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKP 131
L+HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------ 114
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 115 -------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 158
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 159 VRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 109
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 110 YLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 167 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 93
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 94 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 148
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 149 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 202
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAV 240
+ +++SD++S G+ L+E+ GR +
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 21/206 (10%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
+LG+G +G VY G S +AIK++ + ++ E+ + L H N+V +G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHD----LSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
++ + E +P GS+ L L ++ + + T+ + GL+YLHD
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQ- 128
Query: 157 PPVIYRDLKCSNILLDRGYHP--KLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYAK 213
+++RD+K N+L++ Y K+SDFG +K L + T T GT Y APE
Sbjct: 129 --IVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIID 182
Query: 214 TGQLTL--KSDVYSFGVVLLEILSGR 237
G +D++S G ++E+ +G+
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 20/252 (7%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHH 90
K + LG+GGF + Y+ + A K + ++ + + E+ + L +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
P++V G+ D D +V E S L +L +K + +G++Y
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRS----LLELHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
LH+ VI+RDLK N+ L+ K+ DFGLA + + + GT Y APE
Sbjct: 142 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLAT--KIEFDGERKKDLCGTPNYIAPE 196
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTS--------KAAAEQSLVAWARPLFQDR 262
+ + D++S G +L +L G+ +TS E S+ P+
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASAL 256
Query: 263 TRHSLIADPELQ 274
R L ADP L+
Sbjct: 257 IRRMLHADPTLR 268
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKP 131
L+HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------ 112
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 113 -------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 157 VRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--- 146
HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYL 109
Query: 147 -----GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
GL + H V++RDLK N+L++ KL+DFGLA+ V T+ T +
Sbjct: 110 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEV 164
Query: 202 GTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T Y APE + + D++S G + E+++ R
Sbjct: 165 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 110
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 111 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 168 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 108
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 109 YLFQLLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 166 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 60
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 109
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 110 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 166
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 167 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 110
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 111 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 167
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 168 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 62
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 111
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 112 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 168
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 169 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKP 131
L+HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------ 112
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 113 -------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 157 VRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKP 131
L+HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------ 112
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 113 -------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 157 VRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 107
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 108 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 164
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 165 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 15/211 (7%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 58
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L+HPN+V L+ ++ LV+E++ ++D + + PL +G
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYLFQL--LQG 115
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L + H V++RDLK N+L++ KL+DFGLA+ V T+ V T Y
Sbjct: 116 LAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYR 170
Query: 208 APEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
APE + + D++S G + E+++ R
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 91/166 (54%), Gaps = 15/166 (9%)
Query: 85 LSLLHHPNLVNLIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKI 140
L +LH N ++G+ +DG+ + + E+M GS++ L G+ P ++ I
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSI 130
Query: 141 AAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRV 200
A +GL YL +K K +++RD+K SNIL++ KL DFG++ G + D+ ++
Sbjct: 131 AV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSF 182
Query: 201 MGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAA 246
+GT Y +PE + +++SD++S G+ L+E+ GR + + +
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGS 228
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKP 131
L+HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL------ 115
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 116 -------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 160 VRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 59
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR- 146
L+HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKS 108
Query: 147 -------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
GL + H V++RDLK N+L++ KL+DFGLA+ V T+
Sbjct: 109 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV 165
Query: 200 VMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
V T Y APE + + D++S G + E+++ R
Sbjct: 166 V--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 111
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 112 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 158 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAV 240
+ +++SD++S G+ L+E+ GR +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVNLIGYC 100
LGEG F K + NQ A+K + + ++ N + E+ L L HPN+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR-MEANTQ--KEITALKLCEGHPNIVKLHEVF 75
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
D LV E + G + + + KK I + ++HD V+
Sbjct: 76 HDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMHDVG---VV 128
Query: 161 YRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
+RDLK N+L + K+ DFG A+L P DN + T T Y APE
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKP-PDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 218 TLKSDVYSFGVVLLEILSGR 237
D++S GV+L +LSG+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAV 240
+ +++SD++S G+ L+E+ GR +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 111
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 112 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 158 TYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAI+++ Q + L E+ +L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVL 83
R+L +++ ++G G FG V +S + A+K L + + + F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 84 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS-PGKKPLDWNTRMKIAA 142
+++ + P +V L D +V EYMP G + + + + P K + + +A
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 143 GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG----LAKLGPVGDNTHVST 198
A + ++H RD+K N+LLD+ H KL+DFG + K G V +T V
Sbjct: 182 DAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-- 230
Query: 199 RVMGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 236
GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 231 ---GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 102/220 (46%), Gaps = 22/220 (10%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVL 83
R L +++ ++G G FG V ++ + A+K L + + + F E
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 84 MLSLLHHPNLVNLIGYCADGDQRLL--VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIA 141
+++ + P +V L +CA D + L V EYMP G D ++ +S P W
Sbjct: 128 IMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGG---DLVNLMSNYDVPEKWAKFY--T 180
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRV 200
A L+ +H +I+RD+K N+LLD+ H KL+DFG K+ G H T V
Sbjct: 181 AEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDTAV 236
Query: 201 MGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 236
GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 237 -GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 31/217 (14%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 61
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--- 146
HPN+V L+ ++ LV+E++ DL KK +D + I +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLH--------QDL---KKFMDASALTGIPLPLIKSYL 110
Query: 147 -----GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
GL + H V++RDLK N+L++ KL+DFGLA+ V T+ V
Sbjct: 111 FQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV- 166
Query: 202 GTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T Y APE + + D++S G + E+++ R
Sbjct: 167 -TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 13/205 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 10 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 69
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 70 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 124
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D ++ +GT Y +PE
Sbjct: 125 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MANEFVGTRSYMSPERL 178
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGR 237
+ +++SD++S G+ L+E+ GR
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 39 ESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVNLI 97
E +LGEG RV +Q+ A+K +++ EV ML H N++ LI
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ + D+ LV+E M GS+ H+H ++ + + A L++LH+K
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNKG-- 131
Query: 158 PVIYRDLKCSNILLDRGYHP------KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGY 206
+ +RDLK NIL + HP K+ DFGL + GD + +ST + G+ Y
Sbjct: 132 -IAHRDLKPENILCE---HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 207 CAPE----YAKTGQLTLK-SDVYSFGVVLLEILSG 236
APE +++ + K D++S GV+L +LSG
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAV 240
+ +++SD++S G+ L+E+ GR +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 90 HPNLVNLIGYCADGDQRLLVYEY----------------MPLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E+ +PL ++ +L L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQL-------- 111
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 112 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 TY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVL 83
R+L +++ ++G G FG V +S + A+K L + + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 84 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS-PGKKPLDWNTRMKIAA 142
+++ + P +V L D +V EYMP G + + + + P K + + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 143 GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG----LAKLGPVGDNTHVST 198
A + ++H RD+K N+LLD+ H KL+DFG + K G V +T V
Sbjct: 187 DAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-- 235
Query: 199 RVMGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 236
GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 236 ---GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVL 83
R+L +++ ++G G FG V +S + A+K L + + + F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 84 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS-PGKKPLDWNTRMKIAA 142
+++ + P +V L D +V EYMP G + + + + P K + + +A
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 143 GAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG----LAKLGPVGDNTHVST 198
A + ++H RD+K N+LLD+ H KL+DFG + K G V +T V
Sbjct: 187 DAIHSMGFIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-- 235
Query: 199 RVMGTYGYCAPEYAKT----GQLTLKSDVYSFGVVLLEILSG 236
GT Y +PE K+ G + D +S GV L E+L G
Sbjct: 236 ---GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQ-DVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNL 93
+ + S +GEG +G V Y +++N+ VAIK++ Q + L E+ +L H N+
Sbjct: 45 YTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 94 V--NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
+ N I +Q VY L + L+ L + L + RGL+Y+
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGAD--LYKLLKTQH-LSNDHICYFLYQILRGLKYI 160
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPE 210
H V++RDLK SN+LL+ K+ DFGLA++ P D+T T + T Y APE
Sbjct: 161 HSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 211 YAKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 47/227 (20%)
Query: 32 ATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSL 87
+ +NF+ +GEG +G VYK + + VA+K++ + GV + E+ +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA--IREISLLKE 61
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEY----------------MPLGSVEDHLHDLSPGKKP 131
L+HPN+V L+ ++ LV+E+ +PL ++ +L L
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL------ 115
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVG 191
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 116 -------------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 159
Query: 192 DNTHVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ V T Y APE + + D++S G + E+++ R
Sbjct: 160 VRTYXHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAV 240
+ +++SD++S G+ L+E+ GR +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 108/208 (51%), Gaps = 13/208 (6%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+F S LG G G V+K + +A K + R ++ E+ +L + P +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 94 VNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
V G + +DG+ + + E+M GS++ L G+ P ++ IA +GL YL
Sbjct: 67 VGFYGAFYSDGEISICM-EHMDGGSLDQVLK--KAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA 212
+K K +++RD+K SNIL++ KL DFG++ G + D+ ++ +GT Y +PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MANSFVGTRSYMSPERL 175
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGRKAV 240
+ +++SD++S G+ L+E+ GR +
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+FR +LG G F V + + VAIK + + ++G + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI 78
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L G L+ + + G + D + + K ++ ++YLHD
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 154 KAKPPVIYRDLKCSNIL---LDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+++RDLK N+L LD +SDFGL+K+ G V + GT GY APE
Sbjct: 135 LG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
+ D +S GV+ +L G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 29/224 (12%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE-FLVEVLMLSLLHHPNL 93
+F LG GGFG V++ + + + AIK++ + RE + EV L+ L HP +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 94 VNLIGYCADGDQ---------RLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTR---MKIA 141
V + + ++ +Y M L E+ L D G+ ++ R + I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKEN-LKDWMNGRCTIEERERSVCLHIF 124
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-----------LGPV 190
A +E+LH K +++RDLK SNI K+ DFGL L P+
Sbjct: 125 LQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 191 GDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 234
+ +V GT Y +PE + K D++S G++L E+L
Sbjct: 182 PAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K + ++ A K + + + +R E EV +L + HPN++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + + G+ YLH K
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 128
Query: 156 KPPVIYRDLKCSNI-LLDRGY-HP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ +P KL DFG+A G+ + GT + APE
Sbjct: 129 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 182
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 183 VNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 19/235 (8%)
Query: 14 GASDQITAQTLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQD---VAIKQLDRN 70
G SD++ + ++ + F +LG+G FG V + L+ + VA+K L +
Sbjct: 6 GISDELKEK---LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD 62
Query: 71 GVQGN--REFLVEVLMLSLLHHPNLVNLIGYCADGDQR------LLVYEYMPLGSVEDHL 122
+ + EFL E + HP++ L+G + +++ +M G + L
Sbjct: 63 IIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122
Query: 123 HDLSPGKKPLDW--NTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS 180
G+ P + T ++ A G+EYL + I+RDL N +L ++
Sbjct: 123 LASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVA 179
Query: 181 DFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS 235
DFGL++ GD + A E T+ SDV++FGV + EI++
Sbjct: 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN-REFLVEVLMLSLLHHPNLV 94
+ + S +GEG +G V Y VAIK++ Q + L E+ +L H N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 95 --NLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
N I +Q VY L +E L+ L + L + RGL+Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDL--METDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 146
Query: 153 DKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLG-PVGDNTHVSTRVMGTYGYCAPEY 211
V++RDLK SN+LL+ K+ DFGLA++ P D+T + T Y APE
Sbjct: 147 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 212 AKTGQLTLKS-DVYSFGVVLLEILSGR 237
+ KS D++S G +L E+LS R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 49/234 (20%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
+F ++LG+G FG+V K ++ AIK++ R+ + L EV++L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVV 65
Query: 95 NLIGYCADGDQRLLV---------------YEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 139
Y A ++R V EY ++ D +H + ++ ++ +
Sbjct: 66 RY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY---WR 120
Query: 140 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS-- 197
+ L Y+H + +I+RDLK NI +D + K+ DFGLAK N H S
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK------NVHRSLD 171
Query: 198 ----------------TRVMGTYGYCAPEYAK-TGQLTLKSDVYSFGVVLLEIL 234
T +GT Y A E TG K D+YS G++ E++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+FR +LG G F V + + VAIK + + ++G + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L G L+ + + G + D + + K ++ ++YLHD
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 154 KAKPPVIYRDLKCSNIL---LDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+++RDLK N+L LD +SDFGL+K+ G V + GT GY APE
Sbjct: 135 LG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
+ D +S GV+ +L G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K + ++ A K + + + +R E EV +L + HPN++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + + G+ YLH K
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 135
Query: 156 KPPVIYRDLKCSNI-LLDRGY-HP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ +P KL DFG+A G+ + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 189
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+FR +LG G F V + + VAIK + + ++G + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L G L+ + + G + D + + K ++ ++YLHD
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 154 KAKPPVIYRDLKCSNIL---LDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+++RDLK N+L LD +SDFGL+K+ G V + GT GY APE
Sbjct: 135 LG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPE 188
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
+ D +S GV+ +L G
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 28/254 (11%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNL 93
+FR +LG G F V + + VAIK + + ++G + E+ +L + HPN+
Sbjct: 21 DFRD--VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L G L+ + + G + D + + K ++ ++YLHD
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHD 134
Query: 154 KAKPPVIYRDLKCSNIL---LDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+++RDLK N+L LD +SDFGL+K+ D V + GT GY APE
Sbjct: 135 LG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGTPGYVAPE 188
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAA--EQSLVA---WARPLF------ 259
+ D +S GV+ +L G A EQ L A + P +
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 260 -QDRTRHSLIADPE 272
+D RH + DPE
Sbjct: 249 AKDFIRHLMEKDPE 262
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+ ++ + GV + E+ +L L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELN 60
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 112
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 113 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 159 TY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 47/225 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLH 89
+NF+ +GEG +G VYK + + VA+ ++ + GV + E+ +L L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTA--IREISLLKELN 59
Query: 90 HPNLVNLIGYCADGDQRLLVYEYM----------------PLGSVEDHLHDLSPGKKPLD 133
HPN+V L+ ++ LV+E++ PL ++ +L L
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL-------- 111
Query: 134 WNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDN 193
+GL + H V++RDLK N+L++ KL+DFGLA+ V
Sbjct: 112 -----------LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 194 THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGR 237
T+ T + T Y APE + + D++S G + E+++ R
Sbjct: 158 TY--THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K + ++ A K + + + +R E EV +L + HPN++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + + G+ YLH K
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR 149
Query: 156 KPPVIYRDLKCSNI-LLDRGY-HP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ +P KL DFG+A G+ + GT + APE
Sbjct: 150 ---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 203
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 204 VNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIG 98
LG G +G V + + AIK + ++ V L EV +L L HPN++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ D LV E G + D + L +D MK G YLH K
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEII-LRQKFSEVDAAVIMK---QVLSGTTYLH---KHN 124
Query: 159 VIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
+++RDLK N+LL+ R K+ DFGL+ VG +GT Y APE +
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPEVLRK- 180
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ K DV+S GV+L +L G
Sbjct: 181 KYDEKCDVWSCGVILYILLCG 201
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G +G V Y + Q VA+K+L R + R E+ +L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 100 CADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTRMKIAAGAAR 146
+ P S+ED L+++ + D + + + R
Sbjct: 96 ------------FTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLR 142
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
GL+Y+H +I+RDLK SN+ ++ ++ DFGLA+ +V+TR Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WY 194
Query: 207 CAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 41/284 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAAA----------EQSLVAWARPLF 259
L L++D++S GV+ +LSG DT + E + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 260 QDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 294
+D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 89/201 (44%), Gaps = 17/201 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE---FLVEVLMLSLLHHPNLVNLIG 98
LG G +G V + + AIK + ++ V L EV +L L HPN++ L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ D LV E G + D + L +D MK G YLH K
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEI-ILRQKFSEVDAAVIMK---QVLSGTTYLH---KHN 141
Query: 159 VIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
+++RDLK N+LL+ R K+ DFGL+ VG +GT Y APE +
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM---KERLGTAYYIAPEVLRK- 197
Query: 216 QLTLKSDVYSFGVVLLEILSG 236
+ K DV+S GV+L +L G
Sbjct: 198 KYDEKCDVWSCGVILYILLCG 218
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G +G V Y + Q VA+K+L R + R E+ +L L H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHD-LSPGKKPLDWNTRMKIAAGA-----------ARG 147
+ P S+ED L D N +K A + RG
Sbjct: 88 ------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRG 135
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ ++ DFGLA+ +V+TR Y
Sbjct: 136 LKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYR 187
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L G+
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G +G V Y + Q VA+K+L R + R E+ +L L H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHD-LSPGKKPLDWNTRMKIAAGA-----------ARG 147
+ P S+ED L D N +K A + RG
Sbjct: 96 ------------FTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRG 143
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ ++ DFGLA+ +V+TR Y
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYR 195
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 39 ESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVNLI 97
E +LGEG RV +Q+ A+K +++ EV ML H N++ LI
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ + D+ LV+E M GS+ H+H ++ + + A L++LH+K
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNKG-- 131
Query: 158 PVIYRDLKCSNILLDRGYHP------KLSDFGLAK-LGPVGDNTHVSTRVM----GTYGY 206
+ +RDLK NIL + HP K+ DF L + GD + +ST + G+ Y
Sbjct: 132 -IAHRDLKPENILCE---HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY 187
Query: 207 CAPE----YAKTGQLTLK-SDVYSFGVVLLEILSG 236
APE +++ + K D++S GV+L +LSG
Sbjct: 188 MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
KI + L +L + K +I+RD+K SNILLDR + KL DFG++ G + D+ T
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVDSI-AKT 183
Query: 199 RVMGTYGYCAPE----YAKTGQLTLKSDVYSFGVVLLEILSGR 237
R G Y APE A ++SDV+S G+ L E+ +GR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPNLVNLIGYC 100
LGEG + VYKG + + VA+K++ +G + EV +L L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
LV+EY+ ++ +L D ++ + RGL Y H + V+
Sbjct: 70 HTEKSLTLVFEYLD-KDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCH---RQKVL 122
Query: 161 YRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY-AKTGQLTL 219
+RDLK N+L++ KL+DFGLA+ + T+ + V T Y P+ + +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYST 180
Query: 220 KSDVYSFGVVLLEILSGR 237
+ D++ G + E+ +GR
Sbjct: 181 QIDMWGVGCIFYEMATGR 198
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 41/284 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAAA----------EQSLVAWARPLF 259
L L++D++S GV+ +LSG DT + E + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 260 QDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 294
+D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 41/284 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAAA----------EQSLVAWARPLF 259
L L++D++S GV+ +LSG DT + E + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 260 QDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 294
+D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 22/228 (9%)
Query: 13 DGASDQITAQTLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV 72
D ++ + Q++ F + + + +G G + + ++ N + A+K +D++
Sbjct: 12 DLGTENLYFQSMVFSD------GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKR 65
Query: 73 QGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPL 132
+ E +E+L L HPN++ L DG LV E M G + D + +K
Sbjct: 66 DPSEE--IEIL-LRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR----QKFF 118
Query: 133 DWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNIL-LDRGYHP---KLSDFGLAKLG 188
+ + +EYLH + V++RDLK SNIL +D +P ++ DFG AK
Sbjct: 119 SEREASFVLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAK-Q 174
Query: 189 PVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+N + T T + APE K D++S G++L +L+G
Sbjct: 175 LRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 92/220 (41%), Gaps = 29/220 (13%)
Query: 42 LGEGGFGRV------YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVN 95
LGEGGF V + G+ ++ + + +Q DR Q E M L +HPN++
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQR------EADMHRLFNHPNILR 90
Query: 96 LIGYC----ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYL 151
L+ YC + L+ + G++ + + L L + + + G RGLE +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 152 HDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPV---GDNTHVSTRVMG----TY 204
H K +RDLK +NILL P L D G + G ++ + T
Sbjct: 151 HAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 205 GYCAPEYAKTGQLTL---KSDVYSFGVVLLEILSGRKAVD 241
Y APE + ++DV+S G VL ++ G D
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHHPNLVNLI 97
LG+GGF + ++ + A K + ++ + + +E+ + L H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G+ D D +V E S L +L +K L G +YLH
Sbjct: 106 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 159
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
VI+RDLK N+ L+ K+ DFGLA K+ G+ V + GT Y APE
Sbjct: 160 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 215
Query: 217 LTLKSDVYSFGVVLLEILSGRKAVDTS 243
+ + DV+S G ++ +L G+ +TS
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 116/284 (40%), Gaps = 41/284 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAAA----------EQSLVAWARPLF 259
L L++D++S GV+ +LSG DT + E + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 260 QDRTRHSLIADPELQG------QYP---PRGFYQALAVAAMCVH 294
+D R L+ DP+ + Q+P P+ QAL+ A V+
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHHPNLVNLI 97
LG+GGF + ++ + A K + ++ + + +E+ + L H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G+ D D +V E S L +L +K L G +YLH
Sbjct: 108 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 161
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
VI+RDLK N+ L+ K+ DFGLA K+ G+ V + GT Y APE
Sbjct: 162 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 217
Query: 217 LTLKSDVYSFGVVLLEILSGRKAVDTS 243
+ + DV+S G ++ +L G+ +TS
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 31 AATKNFRSE----SLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEV---- 82
AA K F + ++G G V + + + A+K ++ + + E L EV
Sbjct: 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREAT 146
Query: 83 -----LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTR 137
++ + HP+++ LI LV++ M G + D+L + K L
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKET 202
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I + +LH +++RDLK NILLD +LSDFG + G+
Sbjct: 203 RSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR-- 257
Query: 198 TRVMGTYGYCAPEYAKTGQLTL------KSDVYSFGVVLLEILSG 236
+ GT GY APE K + D+++ GV+L +L+G
Sbjct: 258 -ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 15/162 (9%)
Query: 81 EVLMLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM 138
E+ +L L HPN+V L+ D D +V+E + G V + P KPL +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-----VPTLKPLSEDQAR 140
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+G+EYLH + +I+RD+K SN+L+ H K++DFG++ G + +S
Sbjct: 141 FYFQDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFK-GSDALLSN 196
Query: 199 RVMGTYGYCAPEYAKTGQLTLKS---DVYSFGVVLLEILSGR 237
V GT + APE + DV++ GV L + G+
Sbjct: 197 TV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+G G + + ++ N + A+K +D++ + E +E+L L HPN++ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE--IEIL-LRYGQHPNIITLKDVYD 91
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
DG LV E M G + D + +K + + +EYLH + V++
Sbjct: 92 DGKHVYLVTELMRGGELLDKILR----QKFFSEREASFVLHTIGKTVEYLHSQG---VVH 144
Query: 162 RDLKCSNIL-LDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
RDLK SNIL +D +P ++ DFG AK +N + T T + APE K
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTPCY-TANFVAPEVLKRQGY 202
Query: 218 TLKSDVYSFGVVLLEILSG 236
D++S G++L +L+G
Sbjct: 203 DEGCDIWSLGILLYTMLAG 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 14/207 (6%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHHPNLVNLI 97
LG+GGF + ++ + A K + ++ + + +E+ + L H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G+ D D +V E S L +L +K L G +YLH
Sbjct: 82 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 135
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
VI+RDLK N+ L+ K+ DFGLA K+ G+ V + GT Y APE
Sbjct: 136 -VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSKKG 191
Query: 217 LTLKSDVYSFGVVLLEILSGRKAVDTS 243
+ + DV+S G ++ +L G+ +TS
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQ-LDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGY 99
+G+G FG V+K Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 100 C---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--------GL 148
C A R Y+ E HDL+ L N +K + GL
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCE---HDLAG----LLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTH---VSTRVMGTYG 205
Y+H + +++RD+K +N+L+ R KL+DFGLA+ + N+ RV+ T
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLW 194
Query: 206 YCAPE 210
Y PE
Sbjct: 195 YRPPE 199
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 128/348 (36%), Gaps = 99/348 (28%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQGN-REFLVEVLMLSLL-HHPNLV 94
LG G FG+V + I + VA+K L + + E+ +L+ + HH N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 95 NLIGYCA-DGDQRLLVYEYMPLGSVEDHLHD-------------------------LSPG 128
NL+G C G +++ EY G++ ++L L G
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQG 154
Query: 129 KKP-LDWNTRMKIAAGAA-------------------------------------RGLEY 150
KKP LD T + A + RG+E+
Sbjct: 155 KKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEF 214
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHV----STRVMGTYGY 206
L + I+RDL NILL K+ DFGLA+ + N TR+ +
Sbjct: 215 LSSRK---CIHRDLAARNILLSENNVVKICDFGLAR--DIYKNPDYVRKGDTRL--PLKW 267
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRTRHS 266
APE + KSDV+S+GV+L EI S + E F R R
Sbjct: 268 MAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED---------FCSRLREG 318
Query: 267 L-IADPELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
+ + PE Y YQ + C H P RP A++V L L
Sbjct: 319 MRMRAPE----YSTPEIYQ---IMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 42 LGEGGFGRVY-----KGYLESINQDVAIKQLDR--------NGVQGNREFLVEVLMLSLL 88
LG G +G V G+ E + + Q D+ N + + E E+ +L L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 89 HHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
HPN++ L D LV E+ G + + + + D I G+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI----INRHKFDECDAANIMKQILSGI 159
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRG---YHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
YLH K +++RD+K NILL+ + K+ DFGL+ + + R +GT
Sbjct: 160 CYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF--FSKDYKLRDR-LGTAY 213
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y APE K + K DV+S GV++ +L G
Sbjct: 214 YIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 117/284 (41%), Gaps = 41/284 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSGRKAV--DTSKAAA----------EQSLVAWARPLF 259
L L++D++S GV+ +LSG DT + E + L
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 248
Query: 260 QDRTRHSLIADPE----LQG--QYP---PRGFYQALAVAAMCVH 294
+D R L+ DP+ +Q Q+P P+ QAL+ A V+
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN 292
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S + A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 38 SESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVNL 96
+ LLGEG + +V ++ A+K +++ EV L + N++ L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 97 IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAK 156
I + D + LV+E + GS+ H+ +K + ++ A L++LH K
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQK----QKHFNEREASRVVRDVAAALDFLHTKG- 131
Query: 157 PPVIYRDLKCSNILLD--RGYHP-KLSDFGLAKLGPVGDN-THVSTRVM----GTYGYCA 208
+ +RDLK NIL + P K+ DF L + ++ T ++T + G+ Y A
Sbjct: 132 --IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 209 PEYAK--TGQLTL---KSDVYSFGVVLLEILSG 236
PE + T Q T + D++S GVVL +LSG
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 134 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 187
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 133
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 134 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 187
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S + A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S + A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S + A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQ-LDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGY 99
+G+G FG V+K Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 100 C---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--------GL 148
C A R Y+ E HDL+ L N +K + GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCE---HDLAG----LLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTH---VSTRVMGTYG 205
Y+H + +++RD+K +N+L+ R KL+DFGLA+ + N+ RV+ T
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLW 194
Query: 206 YCAPE 210
Y PE
Sbjct: 195 YRPPE 199
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S + A K + + + +R E EV +L + H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G L D K+ L G+ YLH K
Sbjct: 80 LHDVYENRTDVVLILELVSGGE----LFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK 135
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLD+ H KL DFGLA + D + GT + APE
Sbjct: 136 ---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEI 189
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHHPNLVNLI 97
LG+GGF + ++ + A K + ++ + + +E+ + L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G+ D D +V E S L +L +K L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
VI+RDLK N+ L+ K+ DFGLA V + + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 218 TLKSDVYSFGVVLLEILSGRKAVDTS 243
+ + DV+S G ++ +L G+ +TS
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHHPNLVNLI 97
LG+GGF + ++ + A K + ++ + + +E+ + L H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G+ D D +V E S L +L +K L G +YLH
Sbjct: 88 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 141
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
VI+RDLK N+ L+ K+ DFGLA V + + GT Y APE
Sbjct: 142 -VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGH 198
Query: 218 TLKSDVYSFGVVLLEILSGRKAVDTS 243
+ + DV+S G ++ +L G+ +TS
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRN--GVQGNRE------FLVEVLMLSLLHHPNL 93
LG G G V + + VAIK + + + RE E+ +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
+ + + D + +V E M G L D G K L T ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 154 KAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+I+RDLK N+LL + K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 211 Y---AKTGQLTLKSDVYSFGVVLLEILSG 236
T D +S GV+L LSG
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRN--GVQGNRE------FLVEVLMLSLLHHPNL 93
LG G G V + + VAIK + + + RE E+ +L L+HP +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
+ + + D + +V E M G L D G K L T ++YLH+
Sbjct: 77 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 131
Query: 154 KAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+I+RDLK N+LL + K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 132 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 185
Query: 211 Y---AKTGQLTLKSDVYSFGVVLLEILSG 236
T D +S GV+L LSG
Sbjct: 186 VLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 88/206 (42%), Gaps = 12/206 (5%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---QGNREFLVEVLMLSLLHHPNLVNLI 97
LG+GGF + ++ + A K + ++ + + +E+ + L H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
G+ D D +V E S L +L +K L G +YLH
Sbjct: 84 GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR-- 137
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
VI+RDLK N+ L+ K+ DFGLA V + + GT Y APE
Sbjct: 138 -VIHRDLKLGNLFLNEDLEVKIGDFGLAT--KVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 218 TLKSDVYSFGVVLLEILSGRKAVDTS 243
+ + DV+S G ++ +L G+ +TS
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRN--GVQGNRE------FLVEVLMLSLLHHPNL 93
LG G G V + + VAIK + + + RE E+ +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
+ + + D + +V E M G L D G K L T ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 154 KAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+I+RDLK N+LL + K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 211 Y---AKTGQLTLKSDVYSFGVVLLEILSG 236
T D +S GV+L LSG
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRN--GVQGNRE------FLVEVLMLSLLHHPNL 93
LG G G V + + VAIK + + + RE E+ +L L+HP +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
+ + + D + +V E M G L D G K L T ++YLH+
Sbjct: 78 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 132
Query: 154 KAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+I+RDLK N+LL + K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 133 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 186
Query: 211 Y---AKTGQLTLKSDVYSFGVVLLEILSG 236
T D +S GV+L LSG
Sbjct: 187 VLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 111/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E M V+D L D + L + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERME--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 132 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 183
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 243
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 244 ALRPSDRPTFEEIQNHPWMQD 264
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 25/209 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRN--GVQGNRE------FLVEVLMLSLLHHPNL 93
LG G G V + + VAIK + + + RE E+ +L L+HP +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
+ + + D + +V E M G L D G K L T ++YLH+
Sbjct: 84 IKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE 138
Query: 154 KAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+I+RDLK N+LL + K++DFG +K+ +G+ + + T + GT Y APE
Sbjct: 139 NG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPE 192
Query: 211 Y---AKTGQLTLKSDVYSFGVVLLEILSG 236
T D +S GV+L LSG
Sbjct: 193 VLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQ-LDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGY 99
+G+G FG V+K Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 100 C---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--------GL 148
C A R Y+ E HDL+ L N +K + GL
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCE---HDLAG----LLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTH---VSTRVMGTYG 205
Y+H + +++RD+K +N+L+ R KL+DFGLA+ + N+ RV+ T
Sbjct: 138 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLW 193
Query: 206 YCAPE 210
Y PE
Sbjct: 194 YRPPE 198
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K + S + +G G +G V + + VAIK+L R + + R + E+L+L + H
Sbjct: 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEY---MPLGSVE-DHLHDLSPGKKPLDWNTRMKIAAGAAR 146
N++ L+ Y++ MP + + L ++ + + + +
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLK 137
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
GL+Y+H V++RDLK N+ ++ K+ DFGLA+ +V TR Y
Sbjct: 138 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 189
Query: 207 CAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE + D++S G ++ E+L+G+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 49/234 (20%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
+F ++LG+G FG+V K ++ AIK++ R+ + L EV +L+ L+H +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVV 65
Query: 95 NLIGYCADGDQRLLV---------------YEYMPLGSVEDHLHDLSPGKKPLDWNTRMK 139
Y A ++R V EY ++ D +H + ++ ++ +
Sbjct: 66 RY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY---WR 120
Query: 140 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS-- 197
+ L Y+H + +I+R+LK NI +D + K+ DFGLAK N H S
Sbjct: 121 LFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK------NVHRSLD 171
Query: 198 ----------------TRVMGTYGYCAPEYAK-TGQLTLKSDVYSFGVVLLEIL 234
T +GT Y A E TG K D YS G++ E +
Sbjct: 172 ILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQ-LDRNGVQGNR-EFLVEVLMLSLLHHPNLVNLIGY 99
+G+G FG V+K Q VA+K+ L N +G L E+ +L LL H N+VNLI
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 100 C---ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR--------GL 148
C A R Y+ E HDL+ L N +K + GL
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCE---HDLAG----LLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTH---VSTRVMGTYG 205
Y+H + +++RD+K +N+L+ R KL+DFGLA+ + N+ RV+ T
Sbjct: 139 YYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-TLW 194
Query: 206 YCAPE 210
Y PE
Sbjct: 195 YRPPE 199
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 20/205 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNR------EFLVEVLMLSLLHHPNLVN 95
LG G F V K +S A K + + + +R + EV +L + HPN++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKA 155
L + +L+ E + G + D L + K+ L + G+ YLH
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ 134
Query: 156 KPPVIYRDLKCSNI-LLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+ + DLK NI LLDR K+ DFGLA G+ + GT + APE
Sbjct: 135 ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEI 188
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
L L++D++S GV+ +LSG
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 24/221 (10%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLD--RNGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
L+G+G FG+VY G +VAI+ +D R+ + F EV+ H N+V +G
Sbjct: 40 LIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
C ++ ++ + D K LD N +IA +G+ YLH K
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAKG--- 150
Query: 159 VIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM---GTYGYCAPEYAKTG 215
++++DLK N+ D G ++DFGL + V ++ G + APE +
Sbjct: 151 ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQL 209
Query: 216 Q---------LTLKSDVYSFGVVLLEILSGRKAVDTSKAAA 247
+ SDV++ G + E+ + T A A
Sbjct: 210 SPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA 250
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 21/202 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
+GEG +G VYK + + A+K++ + G+ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ +LV+E+ L L D+ G L+ T G+ Y HD+
Sbjct: 67 DVIHTKKRLVLVFEH--LDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVSTRVMGTYGYCAPEYAK-T 214
V++RDLK N+L++R K++DFGLA+ G PV TH + T Y AP+ +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH----EIVTLWYRAPDVLMGS 175
Query: 215 GQLTLKSDVYSFGVVLLEILSG 236
+ + D++S G + E+++G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 100/205 (48%), Gaps = 20/205 (9%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYC 100
++G G FG V++ L + +VAIK++ ++ NRE + + ++ HPN+V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVE-SDEVAIKKVLQDKRFKNRELQI----MRIVKHPNVVDLKAFF 101
Query: 101 -ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA----GAARGLEYLHDKA 155
++GD++ V+ + L V + ++ S L M + R L Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 156 KPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYA- 212
+ +RD+K N+LLD G KL DFG AK+ G+ + + + Y APE
Sbjct: 162 ---ICHRDIKPQNLLLDPPSGVL-KLIDFGSAKILIAGEP---NVSXICSRYYRAPELIF 214
Query: 213 KTGQLTLKSDVYSFGVVLLEILSGR 237
T D++S G V+ E++ G+
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
+GEG +G VYK + + A+K++ + G+ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ +LV+E+ L L D+ G L+ T G+ Y HD+
Sbjct: 67 DVIHTKKRLVLVFEH--LDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVSTRVMGTYGYCAPEYAK-T 214
V++RDLK N+L++R K++DFGLA+ G PV TH T Y AP+ +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGS 175
Query: 215 GQLTLKSDVYSFGVVLLEILSG 236
+ + D++S G + E+++G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V++ ++ + K ++ E+ +++ LHHP L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
D + +L+ E++ G + D ++ + + A GL+++H+ + +++
Sbjct: 119 DKYEMVLILEFLSGGELFDR---IAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVH 172
Query: 162 RDLKCSNILLD--RGYHPKLSDFGLA-KLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLT 218
D+K NI+ + + K+ DFGLA KL P + T + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNP----DEIVKVTTATAEFAAPEIVDREPVG 228
Query: 219 LKSDVYSFGVVLLEILSG 236
+D+++ GV+ +LSG
Sbjct: 229 FYTDMWAIGVLGYVLLSG 246
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
+GEG +G VYK + + A+K++ + G+ + E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHSNIVKLY 66
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ +LV+E+ L L D+ G L+ T G+ Y HD+
Sbjct: 67 DVIHTKKRLVLVFEH--LDQDLKKLLDVCEGG--LESVTAKSFLLQLLNGIAYCHDRR-- 120
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAK-LG-PVGDNTHVSTRVMGTYGYCAPEYAK-T 214
V++RDLK N+L++R K++DFGLA+ G PV TH T Y AP+ +
Sbjct: 121 -VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV----TLWYRAPDVLMGS 175
Query: 215 GQLTLKSDVYSFGVVLLEILSG 236
+ + D++S G + E+++G
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 30 AAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLML 85
A + +R + LGEG +G VYK N+ VAIK++ + GV G + EV +L
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA--IREVSLL 87
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN--TRMKIAAG 143
L H N++ L + L++EY E+ L KK +D N M++
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEY-----AENDL------KKYMDKNPDVSMRVIKS 136
Query: 144 ----AARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHP--KLSDFGLAK-LG-PVGD 192
G+ + H + ++RDLK N+LL D P K+ DFGLA+ G P+
Sbjct: 137 FLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 193 NTHVSTRVMGTYGYCAPEY-AKTGQLTLKSDVYSFGVVLLEIL 234
TH + T Y PE + + D++S + E+L
Sbjct: 194 FTH----EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNG--------VQGNRE-FLVEVLM 84
+N+ + +LG G V + + ++ A+K +D G VQ RE L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 85 LSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
L + HPN++ L LV++ M G + D+L + K L KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMG 202
+ LH K +++RDLK NILLD + KL+DFG + +L P G+ V G
Sbjct: 133 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCG 185
Query: 203 TYGYCAPEYAKTGQ------LTLKSDVYSFGVVLLEILSG 236
T Y APE + + D++S GV++ +L+G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K + S + +G G +G V + + VAIK+L R + + R + E+L+L + H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQH 100
Query: 91 PNLVNLIGYCADGDQRLLVYEY---MPLGSVE-DHLHDLSPGKKPLDWNTRMKIAAGAAR 146
N++ L+ Y++ MP + + + ++ + + + +
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLK 155
Query: 147 GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
GL+Y+H V++RDLK N+ ++ K+ DFGLA+ +V TR Y
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WY 207
Query: 207 CAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE + D++S G ++ E+L+G+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 33 TKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPN 92
T + + +G G + + ++ N + A+K +D++ E +E+L L HPN
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPN 77
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L DG +V E M G + D + +K + + +EYLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLH 133
Query: 153 DKAKPPVIYRDLKCSNIL-LDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
+ V++RDLK SNIL +D +P ++ DFG AK +N + T T + A
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLMTPCY-TANFVA 188
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILSG 236
PE + D++S GV+L +L+G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNG--------VQGNRE-FLVEVLM 84
+N+ + +LG G V + + ++ A+K +D G VQ RE L EV +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 85 LSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
L + HPN++ L LV++ M G + D+L + K L KI
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 132
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMG 202
+ LH K +++RDLK NILLD + KL+DFG + +L P G+ V G
Sbjct: 133 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---SVCG 185
Query: 203 TYGYCAPEYAKTGQ------LTLKSDVYSFGVVLLEILSG 236
T Y APE + + D++S GV++ +L+G
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNG--------VQGNRE-FLVEVLM 84
+N+ + +LG G V + + ++ A+K +D G VQ RE L EV +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 85 LSLLH-HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
L + HPN++ L LV++ M G + D+L + K L KI
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRA 119
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA-KLGPVGDNTHVSTRVMG 202
+ LH K +++RDLK NILLD + KL+DFG + +L P G+ V G
Sbjct: 120 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCG 172
Query: 203 TYGYCAPEYAKTGQ------LTLKSDVYSFGVVLLEILSG 236
T Y APE + + D++S GV++ +L+G
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVN 95
F+ E + G+G FG V G +S VAIK++ ++ NRE + + L++LHHPN+V
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 96 LIGY---CADGDQRLL----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGA---- 144
L Y + D+R + V EY+P D LH R ++A
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVP-----DTLHRCCRNY------YRRQVAPPPILIK 132
Query: 145 ------ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLA-KLGPVGDNT-H 195
R + LH + V +RD+K N+L++ KL DFG A KL P N +
Sbjct: 133 VFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 196 VSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGRKAVDTSKAAAE 248
+ +R Y APE Q T D++S G + E++ G +A +
Sbjct: 192 ICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V Y +A+K+L R + + R + E+ +L + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 109
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 110 ENVIGLLDV------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 157
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 158 FLIYQ-ILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 213
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE + D++S G ++ E+L+GR
Sbjct: 214 TR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLD--RNGVQGNREFLVEVLMLSLLHH-PNLVNLIG 98
LG G F V + +S Q+ A K L R G E L E+ +L L P ++NL
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPP 158
+ + +L+ EY G + L + + N +++ G+ YLH
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLC--LPELAEMVSENDVIRLIKQILEGVYYLHQNN--- 151
Query: 159 VIYRDLKCSNILLDRGY---HPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTG 215
+++ DLK NILL Y K+ DFG+++ +G + +MGT Y APE
Sbjct: 152 IVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELR-EIMGTPEYLAPEILNYD 208
Query: 216 QLTLKSDVYSFGVVLLEILS 235
+T +D+++ G++ +L+
Sbjct: 209 PITTATDMWNIGIIAYMLLT 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 14/221 (6%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLML 85
R + + +F+ +SLLGEG +G V + + VAIK+++ + L E+ +L
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
H N++ + Y+ ++ LH + + D + + I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TL 122
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL--GPVGDNTHVSTRVMGT 203
R ++ LH VI+RDLK SN+L++ K+ DFGLA++ DN+ + + G
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 204 YGYCAPEYAKTGQLTLKS-------DVYSFGVVLLEILSGR 237
Y A + + ++ L S DV+S G +L E+ R
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ +++H
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR---- 146
N++ L+ + P S+E+ D+ + +D N I
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 147 --------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S GV++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 24 LTFRELAAATKNFRSESL----LGEGGFGRVYKGYLESINQDVAIKQLDRN--GVQGNRE 77
LT + + K R E + LG G G V + + VAI+ + + + RE
Sbjct: 121 LTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSARE 180
Query: 78 ------FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 131
E+ +L L+HP ++ + + D + +V E M G L D G K
Sbjct: 181 ADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKR 235
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLG 188
L T ++YLH+ +I+RDLK N+LL + K++DFG +K+
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 291
Query: 189 PVGDNTHVSTRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 236
+G+ + + T + GT Y APE T D +S GV+L LSG
Sbjct: 292 -LGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 14/221 (6%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLML 85
R + + +F+ +SLLGEG +G V + + VAIK+++ + L E+ +L
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
H N++ + Y+ ++ LH + + D + + I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TL 122
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL--GPVGDNTHVSTRVMGT 203
R ++ LH VI+RDLK SN+L++ K+ DFGLA++ DN+ + + G
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 204 YGYCAPEYAKTGQLTLKS-------DVYSFGVVLLEILSGR 237
+ A + + ++ L S DV+S G +L E+ R
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
+GEG +G V+K ++ VA+K++ D GV + L E+ +L L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKELKHKNIVRLH 67
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ LV+E+ +D LD +GL + H +
Sbjct: 68 DVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
V++RDLK N+L++R KL+DFGLA+ G + + T Y P+ +L
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLADFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 218 TLKS-DVYSFGVVLLEILSGRKAV 240
S D++S G + E+ + + +
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPL 202
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 103/235 (43%), Gaps = 41/235 (17%)
Query: 23 TLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---------NGVQ 73
T +++ ++F ++G G FG V L++ ++ A+K L++ +
Sbjct: 63 TSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFR 122
Query: 74 GNREFLV--EVLMLSLLHHP-----NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS 126
R+ LV + ++ LH+ NL ++ Y GD L L ED L
Sbjct: 123 EERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTL------LSKFEDRL---- 172
Query: 127 PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK 186
P + + M IA + L Y+H RD+K NIL+D H +L+DFG +
Sbjct: 173 PEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFG-SC 222
Query: 187 LGPVGDNTHVSTRVMGTYGYCAPEYAKT-----GQLTLKSDVYSFGVVLLEILSG 236
L + D T S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ +++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR---- 146
N++ L+ + P S+E+ D+ + +D N I
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 147 --------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S GV++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 14/221 (6%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLD-RNGVQGNREFLVEVLML 85
R + + +F+ +SLLGEG +G V + + VAIK+++ + L E+ +L
Sbjct: 4 RIVYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKIL 63
Query: 86 SLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
H N++ + Y+ ++ LH + + D + + I
Sbjct: 64 KHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQ-TL 122
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL--GPVGDNTHVS------ 197
R ++ LH VI+RDLK SN+L++ K+ DFGLA++ DN+ +
Sbjct: 123 RAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 198 TRVMGTYGYCAPEYAKT-GQLTLKSDVYSFGVVLLEILSGR 237
T + T Y APE T + + DV+S G +L E+ R
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 24 LTFRELAAATKNFRSESL----LGEGGFGRVYKGYLESINQDVAIKQLDRN--GVQGNRE 77
LT + + K R E + LG G G V + + VAI+ + + + RE
Sbjct: 135 LTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSARE 194
Query: 78 ------FLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKP 131
E+ +L L+HP ++ + + D + +V E M G L D G K
Sbjct: 195 ADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGG----ELFDKVVGNKR 249
Query: 132 LDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLG 188
L T ++YLH+ +I+RDLK N+LL + K++DFG +K+
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI- 305
Query: 189 PVGDNTHVSTRVMGTYGYCAPEY---AKTGQLTLKSDVYSFGVVLLEILSG 236
+G+ + + T + GT Y APE T D +S GV+L LSG
Sbjct: 306 -LGETSLMRT-LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 31 AATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHH 90
A + F ES LG G VY+ + + A+K L + + E+ +L L H
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLLRLSH 107
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE- 149
PN++ L + LV E + G + D + + + + A + LE
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG-------YYSERDAADAVKQILEA 160
Query: 150 --YLHDKAKPPVIYRDLKCSNILLDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTY 204
YLH+ +++RDLK N+L K++DFGL+K + ++ + V GT
Sbjct: 161 VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK---IVEHQVLMKTVCGTP 214
Query: 205 GYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
GYCAPE + + D++S G++ +L G
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV-EVLMLSLLHHPN 92
K F + LG G F V ++ + A+K + + ++G + E+ +L + H N
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
+V L + LV + + G + D + + + D +T ++ A + YLH
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK-DASTLIRQVLDA---VYYLH 137
Query: 153 DKAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+ +++RDLK N+L D +SDFGL+K+ GD V + GT GY AP
Sbjct: 138 ---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAP 191
Query: 210 EYAKTGQLTLKSDVYSFGVVLLEILSG 236
E + D +S GV+ +L G
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 83 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLXQVI--QMELDHERMSYLLYQML 136
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY- 190
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNH 82
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 83 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLXQVI--QMELDHERMSYLLYQML 136
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY- 190
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 76 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLXQVI--QMELDHERMSYLLYQML 129
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 130 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY- 183
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 143
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 157
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 209
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 20/213 (9%)
Query: 28 ELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSL 87
E+ AT R LG G FG V++ + A+K++ + E++ +
Sbjct: 72 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAG 122
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L P +V L G +G + E + GS L L + L + + A G
Sbjct: 123 LTSPRIVPLYGAVREGPWVNIFMELLEGGS----LGQLVKEQGCLPEDRALYYLGQALEG 178
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDR-GYHPKLSDFGLAK-LGP--VGDNTHVSTRVMGT 203
LEYLH + +++ D+K N+LL G H L DFG A L P +G + + GT
Sbjct: 179 LEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGT 235
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+ APE K DV+S ++L +L+G
Sbjct: 236 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 103/238 (43%), Gaps = 43/238 (18%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPN 92
N+ + L+G G +G VY Y ++ N++VAIK+++R + + L E+ +L+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 93 LVNLIGYCADGDQRLLVYE--YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
++ L D LL ++ Y+ L + L L L I G ++
Sbjct: 89 IIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL----------------------G 188
+H+ +I+RDLK +N LL++ K+ DFGLA+ G
Sbjct: 147 IHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 189 PVGDN------THVSTRVMGTYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILSGRKA 239
P N +HV TR Y APE + T D++S G + E+L+ K+
Sbjct: 204 PHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 156
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 208
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 142
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 133
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 148 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 199
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 259
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 260 ALRPSDRPTFEEIQNHPWMQD 280
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 24 LTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVL 83
+ F++L TK L E G ++KG + + V + ++ + +R+F E
Sbjct: 7 IDFKQLNFLTK-------LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 84 MLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIA 141
L + HPN++ ++G C L+ +MP GS+ + LH+ + +D + +K A
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFA 117
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
ARG+ +LH +P + L ++++D ++S + V + R M
Sbjct: 118 LDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGR-M 169
Query: 202 GTYGYCAPE-YAKTGQLTLK--SDVYSFGVVLLEILS 235
+ APE K + T + +D++SF V+L E+++
Sbjct: 170 YAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 20/213 (9%)
Query: 28 ELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSL 87
E+ AT R LG G FG V++ + A+K++ + E++ +
Sbjct: 91 EVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-----ELMACAG 141
Query: 88 LHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
L P +V L G +G + E + GS L L + L + + A G
Sbjct: 142 LTSPRIVPLYGAVREGPWVNIFMELLEGGS----LGQLVKEQGCLPEDRALYYLGQALEG 197
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDR-GYHPKLSDFGLAK-LGP--VGDNTHVSTRVMGT 203
LEYLH + +++ D+K N+LL G H L DFG A L P +G + + GT
Sbjct: 198 LEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGT 254
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+ APE K DV+S ++L +L+G
Sbjct: 255 ETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 147 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 198
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 258
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 259 ALRPSDRPTFEEIQNHPWMQD 279
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 133 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 184
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQD 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 133 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 184
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQD 265
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 88 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 135
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 136 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 110 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 167 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 218
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 278
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 279 ALRPSDRPTFEEIQNHPWMQD 299
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 76 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 133 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 184
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 244
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 245 ALRPSDRPTFEEIQNHPWMQD 265
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 175 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 226
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 286
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 287 ALRPSDRPTFEEIQNHPWMQD 307
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 161 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 272
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 160 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 271
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 88 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 135
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 136 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKXQKLTDDHVQFLIYQ-ILRG 137
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 160 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 271
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 142
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 161 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 272
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 88 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 135
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 136 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVA 191
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 160 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 271
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 116/284 (40%), Gaps = 42/284 (14%)
Query: 18 QITAQTLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNRE 77
++ Q +E ++ LLG GGFG VY G S N VAIK ++++ + E
Sbjct: 15 EVLFQGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 74
Query: 78 F------LVEVLMLSLLH--HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGK 129
+EV++L + ++ L+ + D +L+ E V+D L D +
Sbjct: 75 LPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE--PVQD-LFDFITER 131
Query: 130 KPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKL 187
L + + H+ V++RD+K NIL+D RG KL DFG L
Sbjct: 132 GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL 187
Query: 188 GPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLL-------------EI 233
+ D V T GT Y PE+ + + +S V+S G++L EI
Sbjct: 188 --LKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 243
Query: 234 LSGRKAVDTSKAAAEQSLVAWA-------RPLFQDRTRHSLIAD 270
+ G+ + Q L+ W RP F++ H + D
Sbjct: 244 IRGQVFFRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 75 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 132 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 183
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 243
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 244 ALRPSDRPTFEEIQNHPWMQD 264
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 39/213 (18%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
+G G +G V + VA+K+L R + + R + E+ +L + H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 99 YCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTRMKIAAGAA 145
+ P S+E+ L+++ +K D + + I
Sbjct: 99 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ-IL 145
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 206 YCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
Y APE D++S G ++ E+L+GR
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 88 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 135
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 136 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 191
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 192 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 148
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 149 LKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 200
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ K D + + I RG
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCAKLTDDHVQFLIYQ-ILRG 133
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 93 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 140
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 141 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 197 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 74 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 131 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 182
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 242
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 243 ALRPSDRPTFEEIQNHPWMQD 263
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNH 82
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 83 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLXQVI--QMELDHERMSYLLYQML 136
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY- 190
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKXQKLTDDHVQFLIYQ-ILRG 137
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 93 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 140
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 141 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 197 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 86 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 133
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 134 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 189
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 190 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 139
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 79
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 80 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 127
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 128 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 183
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 184 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 131/350 (37%), Gaps = 88/350 (25%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSP---------------GKKPLDW 134
NL+G C G +++ E+ G++ +L ++ P G P+D
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 156
Query: 135 NTRMKIAAGAA----------RGLEYLHDKAKPPVIY----------------------- 161
R+ + + L + ++ P +Y
Sbjct: 157 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 216
Query: 162 -------RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAK 213
RDL NILL K+ DFGLA+ D +V + APE
Sbjct: 217 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 275
Query: 214 TGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADP 271
T++SDV+SFGV+L EI S G K E + R L + R R P
Sbjct: 276 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTP 330
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 321
E+ YQ + C H +P RP +++V L L + D
Sbjct: 331 EM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 368
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 148 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 199
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 260 ALRPSDRPTFEEIQNHPWMQD 280
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 92 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 139
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 140 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 195
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 196 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ +++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR---- 146
N++ L+ + P S+E+ D+ + +D N I
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 147 --------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 120
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 121 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 174
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 175 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 228
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ +++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR---- 146
N++ L+ + P S+E+ D+ + +D N I
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 147 --------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 157
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 209
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 139
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 140 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 83 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 130
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 131 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 187 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 83 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 130
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 131 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 186
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 187 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 128 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 179
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCL 239
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQD 260
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 128 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 179
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ ++ Q L+ W
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIRWCL 239
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQD 260
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 99
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 156
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 157 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 208
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 90 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 147 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 198
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 258
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 259 ALRPSDRPTFEEIQNHPWMQD 279
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 131/350 (37%), Gaps = 88/350 (25%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSP---------------GKKPLDW 134
NL+G C G +++ E+ G++ +L ++ P G P+D
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 154
Query: 135 NTRMKIAAGAA----------RGLEYLHDKAKPPVIY----------------------- 161
R+ + + L + ++ P +Y
Sbjct: 155 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 214
Query: 162 -------RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAK 213
RDL NILL K+ DFGLA+ D +V + APE
Sbjct: 215 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 273
Query: 214 TGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADP 271
T++SDV+SFGV+L EI S G K E + R L + R R P
Sbjct: 274 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTP 328
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYLASQKYESD 321
E+ YQ + C H +P RP +++V L L + D
Sbjct: 329 EM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNLLQANAQQD 366
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 87 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 134
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 135 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 190
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 191 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 17/224 (7%)
Query: 21 AQTLTFRELAAATK---NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG--N 75
+ L F+ +A T+ +++ LG+G F V + ++ Q+ A K ++ + +
Sbjct: 15 TENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH 74
Query: 76 REFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN 135
++ E + LL HPN+V L ++ LV++ + G + + + ++
Sbjct: 75 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDI-------VAREYY 127
Query: 136 TRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGD 192
+ + + LE ++ + +++RDLK N+LL +G KL+DFGLA V
Sbjct: 128 SEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQG 185
Query: 193 NTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
GT GY +PE + D+++ GV+L +L G
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 143
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 120
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 121 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 174
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 175 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 228
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 91 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 148 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 199
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 259
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 260 ALRPXDRPTFEEIQNHPWMQD 280
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 71 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 128 NXG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 179
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 239
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 240 ALRPSDRPTFEEIQNHPWMQD 260
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 16/197 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQL----DRNGVQGNREFLVEVLMLSLLHHPNLVNLI 97
+GEG +G V+K ++ VA+K++ D GV + L E+ +L L H N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKELKHKNIVRLH 67
Query: 98 GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
+ LV+E+ +D LD +GL + H +
Sbjct: 68 DVLHSDKKLTLVFEFCD----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN-- 121
Query: 158 PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
V++RDLK N+L++R KL++FGLA+ G + + T Y P+ +L
Sbjct: 122 -VLHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 218 TLKS-DVYSFGVVLLEI 233
S D++S G + E+
Sbjct: 179 YSTSIDMWSAGCIFAEL 195
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 84 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 137
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 138 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 191
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 83 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 136
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 190
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 93/208 (44%), Gaps = 16/208 (7%)
Query: 33 TKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPN 92
T + + +G G + + ++ N + A+K +D++ E +E+L L HPN
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEE--IEIL-LRYGQHPN 77
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L DG +V E G + D + +K + + +EYLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLH 133
Query: 153 DKAKPPVIYRDLKCSNIL-LDRGYHP---KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
+ V++RDLK SNIL +D +P ++ DFG AK +N + T T + A
Sbjct: 134 AQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK-QLRAENGLLXTPCY-TANFVA 188
Query: 209 PEYAKTGQLTLKSDVYSFGVVLLEILSG 236
PE + D++S GV+L L+G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 161 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 272
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 78 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 125
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 126 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 181
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 182 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 103 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 160 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 211
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 271
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 272 ALRPSDRPTFEEIQNHPWMQD 292
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 77
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 134
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 135 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 186
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 86
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 143
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 144 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 103
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 104 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 151
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 152 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 207
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 208 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 84 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 137
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 138 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 191
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 85
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 142
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 143 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 133
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 104 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 161 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 212
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHLIRWCL 272
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 273 ALRPSDRPTFEEIQNHPWMQD 293
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 100
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 157
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 204
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H + G T
Sbjct: 158 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMXGXVATR 206
Query: 205 GYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
Y APE D++S G ++ E+L+GR
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 91 PNLVNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
N+++L+ + Y+ + ++ +L + + LD + G++
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIK 134
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y AP
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 188
Query: 210 EYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
E D++S G ++ E + GR +D EQ
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 81
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 82 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 135
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 136 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 189
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 78
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 135
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR Y
Sbjct: 136 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 187
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 83 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 136
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY- 190
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 118 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 175 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 226
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 286
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 287 ALRPSDRPTFEEIQNHPWMQD 307
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 185 EVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 91 PNLVNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
N+++L+ + Y+ + ++ +L + + LD + G++
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIK 134
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y AP
Sbjct: 135 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 188
Query: 210 EYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
E D++S G ++ E + GR +D EQ
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 19/226 (8%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 91 PNLVNLIG-YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
N+++L+ + Y+ + ++ +L + + LD + G++
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--QMELDHERMSYLLYQMLCGIK 133
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAP 209
+LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y Y AP
Sbjct: 134 HLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAP 187
Query: 210 EYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
E D++S G ++ E + GR +D EQ
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 137
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 204
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H + G T
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATR 186
Query: 205 GYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
Y APE D++S G ++ E+L+GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREF------LVEVLMLSLLH--HPN 92
LLG GGFG VY G S N VAIK ++++ + E +EV++L +
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLH 152
++ L+ + D +L+ E V+D L D + L + + H
Sbjct: 123 VIRLLDWFERPDSFVLILERPE--PVQD-LFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 153 DKAKPPVIYRDLKCSNILLD--RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+ V++RD+K NIL+D RG KL DFG L + D V T GT Y PE
Sbjct: 180 NCG---VLHRDIKDENILIDLNRG-ELKLIDFGSGAL--LKDT--VYTDFDGTRVYSPPE 231
Query: 211 YAKTGQLTLKS-DVYSFGVVLL-------------EILSGRKAVDTSKAAAEQSLVAWA- 255
+ + + +S V+S G++L EI+ G+ + Q L+ W
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIRWCL 291
Query: 256 ------RPLFQDRTRHSLIAD 270
RP F++ H + D
Sbjct: 292 ALRPSDRPTFEEIQNHPWMQD 312
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 39/219 (17%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPN 92
+++ S +G G +G V + VA+K+L R + + R + E+ +L + H N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHEN 105
Query: 93 LVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTRMK 139
++ L+ + P S+E+ L+++ +K D + +
Sbjct: 106 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFL 153
Query: 140 IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTR 199
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+TR
Sbjct: 154 IYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR 209
Query: 200 VMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
Y APE D++S G ++ E+L+GR
Sbjct: 210 -----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 45/224 (20%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTD 176
Query: 198 TRVMG---TYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
+ G T Y APE D++S G ++ E+L+GR
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR---- 146
N++ L+ + P S+E+ D+ + +D N I
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 147 --------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + +
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS------GRKAVDTSKAAAEQ 249
V+ Y Y APE D++S G ++ E++ GR +D EQ
Sbjct: 185 EVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR---- 146
N++ L+ + P S+E+ D+ + +D N I
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLSQVIQMELDHERMS 129
Query: 147 --------GLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 76
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ +VY + L V + ++ + S K+ L R L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 190
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 25/214 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 76
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKCQKLTDDHVQFLIYQ-ILRG 133
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMG---TY 204
L+Y+H +I+RDLK SN+ ++ K+ DFGLA+ H + G T
Sbjct: 134 LKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--------HTDDEMAGFVATR 182
Query: 205 GYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
Y APE D++S G ++ E+L+GR
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 40/231 (17%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPN 92
N+ + L+G G +G VY Y ++ ++VAIK+++R + + L E+ +L+ L
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 93 LVNLIGYCADGDQRLLVYE--YMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEY 150
++ L D LL ++ Y+ L + L L L I G +
Sbjct: 87 IIRLYDLIIPDD--LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 151 LHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKL-------------------GPVG 191
+H+ +I+RDLK +N LL++ K+ DFGLA+ GP
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 192 DN------THVSTRVMGTYGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILS 235
N +HV TR Y APE + KS D++S G + E+L+
Sbjct: 202 KNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 27/230 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y ++++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNH 82
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAA 145
N+++L+ Q+ L VY M L ++ +L + + LD +
Sbjct: 83 KNIISLLNVFTP--QKTLEEFQDVYLVMEL--MDANLCQVI--QMELDHERMSYLLYQML 136
Query: 146 RGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYG 205
G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++ V+ Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY- 190
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLE------ILSGRKAVDTSKAAAEQ 249
Y APE D++S G ++ E + GR +D EQ
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADG---DQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
N++ L+ ++ VY L + L+++ +K D + + I RG
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD--LNNIVKSQKLTDDHVQFLIYQ-ILRG 137
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
L+Y+H +I+RDLK SN+ ++ K+ DFGL + +V+TR Y
Sbjct: 138 LKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYR 189
Query: 208 APEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
APE D++S G ++ E+L+GR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 28/246 (11%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNL----- 96
LG GG G V+ ++ VAIK++ Q + L E+ ++ L H N+V +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 97 ---------IGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARG 147
+G + + +V EYM E L ++ L+ + R+ RG
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-----ETDLANVLEQGPLLEEHARL-FMYQLLRG 132
Query: 148 LEYLHDKAKPPVIYRDLKCSNILLD-RGYHPKLSDFGLAKLGP--VGDNTHVSTRVMGTY 204
L+Y+H V++RDLK +N+ ++ K+ DFGLA++ H+S ++ T
Sbjct: 133 LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TK 188
Query: 205 GYCAPEYAKT-GQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWARPLFQDRT 263
Y +P + T D+++ G + E+L+G+ + + L+ + P+ +
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248
Query: 264 RHSLIA 269
R L++
Sbjct: 249 RQELLS 254
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 129/342 (37%), Gaps = 88/342 (25%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSP---------------GKKPLDW 134
NL+G C G +++ E+ G++ +L ++ P G P+D
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 147
Query: 135 NTRMKIAAGAA----------RGLEYLHDKAKPPVIY----------------------- 161
R+ + + L + ++ P +Y
Sbjct: 148 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 207
Query: 162 -------RDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAK 213
RDL NILL K+ DFGLA+ D +V + APE
Sbjct: 208 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 266
Query: 214 TGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADP 271
T++SDV+SFGV+L EI S G K E + R L + R R P
Sbjct: 267 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTP 321
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
E+ YQ + C H +P RP +++V L L
Sbjct: 322 EM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNL 351
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 110
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 222
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 104
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 165 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 216
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 185 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 84 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 130
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 131 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 185
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 186 YVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L + + + R + E+ +L + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKH 92
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 93 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 140
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DFGLA+ +V+
Sbjct: 141 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 196
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 197 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 112
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 173 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 224
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ D+GLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 103/237 (43%), Gaps = 41/237 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 83 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 129
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + +
Sbjct: 130 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEP 184
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS------GRKAVDTSKAAAEQ 249
V+ Y Y APE D++S G ++ E++ GR +D EQ
Sbjct: 185 EVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 87
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 88 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 134
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 135 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 189
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS------GRKAVDTSKAAAEQ 249
V+ Y Y APE D++S G ++ E++ GR +D EQ
Sbjct: 190 YVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 114
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 175 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 226
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 155
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 216 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 267
Query: 207 CAPE--YAKTGQLTLKSDVYSFGVVLLEILSGR 237
APE + T T DV+S G VL E+L G+
Sbjct: 268 RAPELIFGAT-DYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 130/342 (38%), Gaps = 88/342 (25%)
Query: 42 LGEGGFGRVYKGYLESINQD-----VAIKQLDRNGVQG-NREFLVEV-LMLSLLHHPNLV 94
LG G FG+V + I++ VA+K L +R + E+ +++ + HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 95 NLIGYCAD-GDQRLLVYEYMPLGSVEDHL----HDLSP---------------GKKPLDW 134
NL+G C G +++ E+ G++ +L ++ P G P+D
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDL 149
Query: 135 NTRMKIAAGAA----------RGLEYLHDKAKPPVIYRDL-------------------- 164
R+ + + L + ++ P +Y+D
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 165 ---KC-------SNILLDRGYHPKLSDFGLAKLGPVGDNTHVST-RVMGTYGYCAPEYAK 213
KC NILL K+ DFGLA+ D +V + APE
Sbjct: 210 ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARLPLKWMAPETIF 268
Query: 214 TGQLTLKSDVYSFGVVLLEILS-GRKAVDTSKAAAEQSLVAWARPLFQ-DRTRHSLIADP 271
T++SDV+SFGV+L EI S G K E + R L + R R P
Sbjct: 269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FCRRLKEGTRMRAPDYTTP 323
Query: 272 ELQGQYPPRGFYQALAVAAMCVHEQPDMRPVIADVVTALAYL 313
E+ YQ + C H +P RP +++V L L
Sbjct: 324 EM---------YQTMLD---CWHGEPSQRPTFSELVEHLGNL 353
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 81
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 142 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 193
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 46/266 (17%)
Query: 38 SESLLGEGGFGRV-YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVN 95
SE +LG G G V ++G + + VA+K R + L+E+ +L+ HPN++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQG--RPVAVK---RMLIDFCDIALMEIKLLTESDDHPNVIR 73
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAAGAARGL 148
YC++ R L Y+ L +L DL K D N +++ + A G+
Sbjct: 74 Y--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 149 EYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGPVGDNTH 195
+LH +I+RDLK NIL+ +SDFGL K G ++
Sbjct: 129 AHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 196 VST--RVMGTYGYCAPEYAKTG-------QLTLKSDVYSFGVVLLEILSGRKAVDTSKAA 246
+ GT G+ APE + +LT D++S G V ILS K K +
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 247 AEQSLVAWARPLFQDRTRH--SLIAD 270
E +++ L + + H SLIA+
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAE 271
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 104/237 (43%), Gaps = 41/237 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 77 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 123
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + ++
Sbjct: 124 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTP 178
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILS------GRKAVDTSKAAAEQ 249
V+ Y Y APE D++S G ++ E++ GR +D EQ
Sbjct: 179 YVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 110
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 171 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 224
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ + NRE + + L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIV 76
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVL-----MLSLLHHPNLVN 95
++G+G F V + Q A+K +D + E L + +L HP++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 96 LI-GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
L+ Y +DG +V+E+M + + + L Y HD
Sbjct: 91 LLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 155 AKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K N+LL + KL DFG+A +G++ V+ +GT + APE
Sbjct: 150 N---IIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVAGGRVGTPHFMAPEV 204
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
K DV+ GV+L +LSG
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ + NRE + + L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIV 76
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 88
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 202
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 89
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 150 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 201
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
KIA + LE+LH K VI+RD+K SN+L++ K+ DFG++ G + D+ T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDSV-AKT 211
Query: 199 RVMGTYGYCAPEYA----KTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
G Y APE ++KSD++S G+ ++E+ R D+ +Q
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 266
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 102/255 (40%), Gaps = 50/255 (19%)
Query: 29 LAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV-QGN----REFLVEVL 83
L K + + +G+G +G V AIK +++N + Q N EV
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 84 MLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLH---DLSPGK----------- 129
++ LHHPN+ L D LV E G + D L+ D S GK
Sbjct: 81 LMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQIC 140
Query: 130 ------------------KPLDWNTRMKIAAGAAR----GLEYLHDKAKPPVIYRDLKCS 167
+ LD+ R K+ + R L YLH++ + +RD+K
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPE 197
Query: 168 NILL--DRGYHPKLSDFGLAKLGPVGDN--THVSTRVMGTYGYCAPEYAKTGQLTL--KS 221
N L ++ + KL DFGL+K +N + T GT + APE T + K
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 222 DVYSFGVVLLEILSG 236
D +S GV+L +L G
Sbjct: 258 DAWSAGVLLHLLLMG 272
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 95
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 156 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 209
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 210 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 42/262 (16%)
Query: 38 SESLLGEGGFGRV-YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVN 95
SE +LG G G V ++G + + VA+K R + L+E+ +L+ HPN++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQG--RPVAVK---RMLIDFCDIALMEIKLLTESDDHPNVIR 91
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAAGAARGL 148
YC++ R L Y+ L +L DL K D N +++ + A G+
Sbjct: 92 Y--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 149 EYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGPVGDNTH 195
+LH +I+RDLK NIL+ +SDFGL K G
Sbjct: 147 AHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 196 VST--RVMGTYGYCAPEYAKTG---QLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQS 250
GT G+ APE + +LT D++S G V ILS K K + E +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
Query: 251 LVAWARPLFQDRTRH--SLIAD 270
++ L + + H SLIA+
Sbjct: 264 IIRGIFSLDEMKCLHDRSLIAE 285
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 112/262 (42%), Gaps = 42/262 (16%)
Query: 38 SESLLGEGGFGRV-YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVN 95
SE +LG G G V ++G + + VA+K R + L+E+ +L+ HPN++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQG--RPVAVK---RMLIDFCDIALMEIKLLTESDDHPNVIR 91
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAAGAARGL 148
YC++ R L Y+ L +L DL K D N +++ + A G+
Sbjct: 92 Y--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 149 EYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGPVGDNTH 195
+LH +I+RDLK NIL+ +SDFGL K G
Sbjct: 147 AHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 196 VST--RVMGTYGYCAPEYAKTG---QLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQS 250
GT G+ APE + +LT D++S G V ILS K K + E +
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
Query: 251 LVAWARPLFQDRTRH--SLIAD 270
++ L + + H SLIA+
Sbjct: 264 IIRGIFSLDEMKCLHDRSLIAE 285
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 35/218 (16%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K +++ +G G G V Y + ++VAIK+L R N R + E++++ ++H
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 84
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWN-----------TRMK 139
N++ L+ + P S+E+ D+ + +D N RM
Sbjct: 85 KNIIGLLNV------------FTPQKSLEE-FQDVYIVMELMDANLCQVIQMELDHERMS 131
Query: 140 -IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
+ G+++LH +I+RDLK SNI++ K+ DFGLA+ G + +
Sbjct: 132 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVP 186
Query: 199 RVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
V+ Y Y APE D++S G ++ E++ G
Sbjct: 187 FVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 76
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDN--THVSTRVMGTYGY 206
Y+H + +RD+K N+LLD KL DFG AK G+ +++ +R Y
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----Y 188
Query: 207 CAPEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 84
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 145 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 198
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 199 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 88
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 149 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 202
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 203 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 20/211 (9%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLV 94
FR +G G FG +Y G N++VAIK N + + L E + +L +
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 95 NLIGYCADGDQRLLVYEYMPLG-SVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
N+ + +GD +LV + LG S+ED + S + L T + +A +E++H
Sbjct: 67 NVRWFGVEGDYNVLVMDL--LGPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVHS 121
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPK---LSDFGLA-KLGPVGDNTHVSTR----VMGTYG 205
K+ ++RD+K N L+ G + DFGLA K + H+ R + GT
Sbjct: 122 KS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178
Query: 206 YCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y + + + + D+ S G VL+ L G
Sbjct: 179 YASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ DF LA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 76
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 190
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 76
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 137 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 190
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 80
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 141 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 194
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 195 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 36 FRSESL--LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHP-- 91
+R E L +G+G FG+V K Y ++Q VA+K + RN + +R+ E+ +L L
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 92 -NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM--KIAAGAARGL 148
N +N+I + R + L S+ +L++L K ++ + K A + L
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSM--NLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
+ LH K +I+ DLK NILL + K+ DFG + ++ V T + + Y
Sbjct: 214 DALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYTXIQSRF-Y 265
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
APE + + D++S G +L E+L+G
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ ++ NRE + + L H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 77
Query: 95 NL-IGYCADGDQRLLVYEYMPLGSVEDHLHDL----SPGKKPLDWNTRMKIAAGAARGLE 149
L + + G+++ VY + L V + ++ + S K+ L R L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 150 YLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCA 208
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y A
Sbjct: 138 YIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYRA 191
Query: 209 PEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
PE T DV+S G VL E+L G+
Sbjct: 192 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 36 FRSESL--LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHP-- 91
+R E L +G+G FG+V K Y ++Q VA+K + RN + +R+ E+ +L L
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 92 -NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM--KIAAGAARGL 148
N +N+I + R + L S+ +L++L K ++ + K A + L
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSM--NLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
+ LH K +I+ DLK NILL + K+ DFG ++ V T + + Y
Sbjct: 214 DALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRVYTXIQSRF-Y 265
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
APE + + D++S G +L E+L+G
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 19/211 (9%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLV 94
++ ++G G FG VY+ L + VAIK++ + NRE + + L H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQI----MRKLDHCNIV 76
Query: 95 NL-IGYCADGDQR-----LLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGL 148
L + + G+++ LV +Y+P +V S K+ L R L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYC 207
Y+H + +RD+K N+LLD KL DFG AK G+ + + + Y
Sbjct: 136 AYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRYYR 189
Query: 208 APEYA-KTGQLTLKSDVYSFGVVLLEILSGR 237
APE T DV+S G VL E+L G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 9/115 (7%)
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVST 198
KIA + LE+LH K VI+RD+K SN+L++ K+ DFG++ G + D+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDDVAKDI 168
Query: 199 RVMGTYGYCAPEYA----KTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
G Y APE ++KSD++S G+ ++E+ R D+ +Q
Sbjct: 169 DA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ FGLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ D GLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 100/235 (42%), Gaps = 41/235 (17%)
Query: 23 TLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---------NGVQ 73
T +E+ ++F ++G G FG V +++ + A+K L++ +
Sbjct: 63 TQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR 122
Query: 74 GNREFLV--EVLMLSLLHHP-----NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS 126
R+ LV + ++ LH+ +L ++ Y GD L L ED L
Sbjct: 123 EERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTL------LSKFEDKL---- 172
Query: 127 PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK 186
P + M +A + L Y+H RD+K N+LLD H +L+DFG +
Sbjct: 173 PEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SC 222
Query: 187 LGPVGDNTHVSTRVMGTYGYCAPEYAKT-----GQLTLKSDVYSFGVVLLEILSG 236
L D T S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 223 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ D GLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K ++ +G G G V + + +VA+K+L R N R + E+++L ++H
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNH 82
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPL--GSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
N+++L+ Q+ L VY M L ++ +H LD +
Sbjct: 83 KNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQ 134
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
G+++LH +I+RDLK SNI++ K+ DFGLA+ N ++ V+
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTR 189
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y Y APE D++S G ++ E++ G
Sbjct: 190 Y-YRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 112/266 (42%), Gaps = 46/266 (17%)
Query: 38 SESLLGEGGFGRV-YKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLH-HPNLVN 95
SE +LG G G V ++G + + VA+K R + L+E+ +L+ HPN++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQG--RPVAVK---RMLIDFCDIALMEIKLLTESDDHPNVIR 73
Query: 96 LIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMK-------IAAGAARGL 148
YC++ R L Y+ L +L DL K D N +++ + A G+
Sbjct: 74 Y--YCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 149 EYLHDKAKPPVIYRDLKCSNILLD-------------RGYHPKLSDFGLAKLGPVGDNTH 195
+LH +I+RDLK NIL+ +SDFGL K G
Sbjct: 129 AHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 196 VST--RVMGTYGYCAPEYAKTG-------QLTLKSDVYSFGVVLLEILSGRKAVDTSKAA 246
GT G+ APE + +LT D++S G V ILS K K +
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 247 AEQSLVAWARPLFQDRTRH--SLIAD 270
E +++ L + + H SLIA+
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAE 271
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 101/235 (42%), Gaps = 41/235 (17%)
Query: 23 TLTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGV---------Q 73
T +E+ ++F ++G G FG V +++ + A+K L++ + +
Sbjct: 79 TQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR 138
Query: 74 GNREFLV--EVLMLSLLHHP-----NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLS 126
R+ LV + ++ LH+ +L ++ Y GD L L ED L
Sbjct: 139 EERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTL------LSKFEDKL---- 188
Query: 127 PGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK 186
P + M +A + L Y+H RD+K N+LLD H +L+DFG +
Sbjct: 189 PEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFG-SC 238
Query: 187 LGPVGDNTHVSTRVMGTYGYCAPEYAKT-----GQLTLKSDVYSFGVVLLEILSG 236
L D T S+ +GT Y +PE + G+ + D +S GV + E+L G
Sbjct: 239 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 39/221 (17%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
+ +++ S +G G +G V + VA+K+L R + + R + E+ +L + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 91 PNLVNLIGYCADGDQRLLVYEYMPLGSVEDH-------------LHDLSPGKKPLDWNTR 137
N++ L+ + P S+E+ L+++ +K D + +
Sbjct: 81 ENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ 128
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVS 197
I RGL+Y+H +I+RDLK SN+ ++ K+ D GLA+ +V+
Sbjct: 129 FLIYQ-ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVA 184
Query: 198 TRVMGTYGYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
TR Y APE D++S G ++ E+L+GR
Sbjct: 185 TR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHH 90
K ++ +G G G V + + +VA+K+L R N R + E+++L ++H
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNH 80
Query: 91 PNLVNLIGYCADGDQRLL-----VYEYMPL--GSVEDHLHDLSPGKKPLDWNTRMKIAAG 143
N+++L+ Q+ L VY M L ++ +H LD +
Sbjct: 81 KNIISLLNVFTP--QKTLEEFQDVYLVMELMDANLCQVIH------MELDHERMSYLLYQ 132
Query: 144 AARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGT 203
G+++LH +I+RDLK SNI++ K+ DFGLA+ N ++ V+
Sbjct: 133 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTR 187
Query: 204 YGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
Y Y APE D++S G ++ E++ G
Sbjct: 188 Y-YRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 14/206 (6%)
Query: 34 KNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNL 93
K F +LG G F V+ + A+K + ++ + E+ +L + H N+
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 94 VNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
V L LV + + G + D + + + D + ++ A + YLH+
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK-DASLVIQQVLSAVK---YLHE 124
Query: 154 KAKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPE 210
+++RDLK N+L + ++DFGL+K+ G + + GT GY APE
Sbjct: 125 NG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPE 177
Query: 211 YAKTGQLTLKSDVYSFGVVLLEILSG 236
+ D +S GV+ +L G
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 20/210 (9%)
Query: 36 FRSESL--LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHP-- 91
+R E L +G+G FG+V K Y ++Q VA+K + RN + +R+ E+ +L L
Sbjct: 97 YRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMV-RNEKRFHRQAAEEIRILEHLRKQDK 155
Query: 92 -NLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRM--KIAAGAARGL 148
N +N+I + R + L S+ +L++L K ++ + K A + L
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSM--NLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 149 EYLHDKAKPPVIYRDLKCSNILLDRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
+ LH K +I+ DLK NILL + K+ DFG + ++ V + + Y
Sbjct: 214 DALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS----CYEHQRVYXXIQSRF-Y 265
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
APE + + D++S G +L E+L+G
Sbjct: 266 RAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGY 99
LG+G F V + Q+ A K ++ + +++ E + LL HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
++ LV++ + G + + + ++ + + + LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 160 IYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
++RDLK N+LL +G KL+DFGLA V + GT GY +PE +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 217 LTLKSDVYSFGVVLLEILSG 236
D+++ GV+L +L G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 40/211 (18%)
Query: 35 NFRSESLLGEGGFGRVYKGYLESIN-QDVAIKQLDRNG-------VQGNREFLVEVLMLS 86
+ + + GG G +Y ++N + V +K L +G R+FL EV+
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVV--- 137
Query: 87 LLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAAR 146
HP++V + + D+ Y+ + V S G+K + +A A
Sbjct: 138 ---HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-------LPVAEAIAY 187
Query: 147 GLE------YLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFG-LAKLGPVGDNTHVSTR 199
LE YLH ++Y DLK NI+L KL D G ++++ G
Sbjct: 188 LLEILPALSYLHSIG---LVYNDLKPENIMLTE-EQLKLIDLGAVSRINSFG-------Y 236
Query: 200 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVL 230
+ GT G+ APE +TG T+ +D+Y+ G L
Sbjct: 237 LYGTPGFQAPEIVRTGP-TVATDIYTVGRTL 266
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
LG G FG V++ + A+K++ + + E++ + L P +V L G
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 134
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+G + E + GS+ + + G P D + A GLEYLH + +++
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQM--GCLPED--RALYYLGQALEGLEYLHTRR---ILH 187
Query: 162 RDLKCSNILLDR-GYHPKLSDFGLA-KLGP--VGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
D+K N+LL G L DFG A L P +G + + GT + APE
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 218 TLKSDVYSFGVVLLEILSG 236
K D++S ++L +L+G
Sbjct: 248 DAKVDIWSSCCMMLHMLNG 266
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 41 LLGEGGFGRVYKGYLES---INQDVAIKQLDRNGVQGNREFLV--EVLMLSLLHHPNLVN 95
LLGEG +G+V K L+S + V I + + N E V E+ +L L H N++
Sbjct: 12 LLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 96 LIG--YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHD 153
L+ Y + + +V EY G E + D P K+ GLEYLH
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKR-FPVCQAHGYFCQLIDGLEYLHS 127
Query: 154 KAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-LGPVGDNTHVSTRVMGTYGYCAPEYA 212
+ ++++D+K N+LL G K+S G+A+ L P + T G+ + PE A
Sbjct: 128 QG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPEIA 183
Query: 213 KTGQLT---LKSDVYSFGVVLLEILSG 236
G T K D++S GV L I +G
Sbjct: 184 -NGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG--NREFLVEVLMLSLLHHPNLVNLIGY 99
LG+G F V + Q+ A K ++ + +++ E + LL HPN+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
++ LV++ + G + + + ++ + + + LE ++ +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI-------VAREYYSEADASHCIQQILESVNHCHLNGI 124
Query: 160 IYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
++RDLK N+LL +G KL+DFGLA V + GT GY +PE +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAI--EVQGDQQAWFGFAGTPGYLSPEVLRKDP 182
Query: 217 LTLKSDVYSFGVVLLEILSG 236
D+++ GV+L +L G
Sbjct: 183 YGKPVDMWACGVILYILLVG 202
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+G G FG + N+ VA+K ++R G + + E++ L HPN+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 85
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+V EY G + + + + G+ D R G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERI--CNAGRFSED-EARF-FFQQLISGVSYAHAMQ---VAH 138
Query: 162 RDLKCSNILLDRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
RDLK N LLD P K++DFG +K + +GT Y APE +
Sbjct: 139 RDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQ---PKSAVGTPAYIAPEVLLKKEYDG 195
Query: 220 K-SDVYSFGVVLLEILSG 236
K +DV+S GV L +L G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 29 LAAATK---NFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV---EV 82
+ A+TK N+ + LG+G F V + ++ + A K ++ + R+F E
Sbjct: 21 MNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREA 79
Query: 83 LMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA 142
+ L HPN+V L + LV++ + G + D+ + + + I
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQ 136
Query: 143 GAARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTR 199
+ Y H +++R+LK N+LL +G KL+DFGLA V D +
Sbjct: 137 -ILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVND-SEAWHG 189
Query: 200 VMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
GT GY +PE K + D+++ GV+L +L G
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLM-LSLLHHPNLVNLIGYC 100
+G G FG V++ + A+K++ F VE L+ + L P +V L G
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLE------VFRVEELVACAGLSSPRIVPLYGAV 119
Query: 101 ADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVI 160
+G + E + GS+ + + G P D + A GLEYLH + ++
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQM--GCLPED--RALYYLGQALEGLEYLHTRR---IL 172
Query: 161 YRDLKCSNILLDR-GYHPKLSDFGLA-KLGP--VGDNTHVSTRVMGTYGYCAPEYAKTGQ 216
+ D+K N+LL G L DFG A L P +G + + GT + APE
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 217 LTLKSDVYSFGVVLLEILSG 236
K D++S ++L +L+G
Sbjct: 233 CDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+G G FG V++ + A+K++ + + E++ + L P +V L G
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAVR 136
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+G + E + GS+ + + G P D + A GLEYLH + +++
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQM--GCLPED--RALYYLGQALEGLEYLHTRR---ILH 189
Query: 162 RDLKCSNILLDR-GYHPKLSDFGLA-KLGP--VGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
D+K N+LL G L DFG A L P +G + + GT + APE
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 218 TLKSDVYSFGVVLLEILSG 236
K D++S ++L +L+G
Sbjct: 250 DAKVDIWSSCCMMLHMLNG 268
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 29/214 (13%)
Query: 42 LGEGGFGRVYKGYLESINQD--VAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG- 98
+G G +G VYK + D A+KQ++ G+ + E+ +L L HPN+++L
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSA--CREIALLRELKHPNVISLQKV 86
Query: 99 YCADGDQRL-LVYEYMP--LGSVEDHLHDLSPGKKPLDWNTRM--KIAAGAARGLEYLHD 153
+ + D+++ L+++Y L + KKP+ M + G+ YLH
Sbjct: 87 FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 154 KAKPPVIYRDLKCSNILL-----DRGYHPKLSDFGLAK-----LGPVGDNTHVSTRVMGT 203
V++RDLK +NIL+ +RG K++D G A+ L P+ D V+ T
Sbjct: 147 NW---VLHRDLKPANILVMGEGPERG-RVKIADMGFARLFNSPLKPLAD----LDPVVVT 198
Query: 204 YGYCAPEYAKTGQLTLKS-DVYSFGVVLLEILSG 236
+ Y APE + K+ D+++ G + E+L+
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 139 KIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK--LGPVGDNTHV 196
KIA + LE+LH K VI+RD+K SN+L++ K DFG++ + V +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 197 STRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSGRKAVDTSKAAAEQ 249
+ PE + G ++KSD++S G+ +E+ R D+ +Q
Sbjct: 198 GCKPYXAPERINPELNQKG-YSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ 249
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+G G FG + N+ VA+K ++R G + + E++ L HPN+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKEVIL 84
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+V EY G + + + + G+ D R G+ Y H V +
Sbjct: 85 TPTHLAIVMEYASGGELFERI--CNAGRFSED-EARF-FFQQLISGVSYCHAMQ---VCH 137
Query: 162 RDLKCSNILLDRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
RDLK N LLD P K+ DFG +K V + ST +GT Y APE +
Sbjct: 138 RDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLKKEYDG 194
Query: 220 K-SDVYSFGVVLLEILSG 236
K +DV+S GV L +L G
Sbjct: 195 KVADVWSCGVTLYVMLVG 212
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 119/297 (40%), Gaps = 48/297 (16%)
Query: 24 LTFRELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVL 83
+ F++L TK L E G ++KG + + V + ++ + +R+F E
Sbjct: 7 IDFKQLNFLTK-------LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECP 59
Query: 84 MLSLLHHPNLVNLIGYCAD--GDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIA 141
L + HPN++ ++G C L+ + P GS+ + LH+ + +D + +K A
Sbjct: 60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGT--NFVVDQSQAVKFA 117
Query: 142 AGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLS--DFGLAKLGPVGDNTHVSTR 199
ARG +LH +P + L ++ +D ++S D + P R
Sbjct: 118 LDXARGXAFLH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP--------GR 168
Query: 200 VMGTYGYCAPE-YAKTGQLTLK--SDVYSFGVVLLEILSGRKAVDTSKAAAEQSLVAWAR 256
+ APE K + T + +D +SF V+L E+++
Sbjct: 169 XYAP-AWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVP----------------- 210
Query: 257 PLFQDRTRHSLIADPELQGQYP--PRGFYQALA-VAAMCVHEQPDMRPVIADVVTAL 310
F D + + L+G P P G ++ + +C +E P RP +V L
Sbjct: 211 --FADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 33 TKNFRSESL------LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQG--NREFLVEVLM 84
T+N +S+ LG+G F V + Q+ A K ++ + +++ E +
Sbjct: 15 TENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARI 74
Query: 85 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGA 144
LL HPN+V L ++ L+++ + G + + + ++ + +
Sbjct: 75 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI-------VAREYYSEADASHCI 127
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
+ LE + + V++RDLK N+LL +G KL+DFGLA V
Sbjct: 128 QQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFA 185
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
GT GY +PE + D+++ GV+L +L G
Sbjct: 186 GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 33 TKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV---EVLMLSLLH 89
+ N+ + LG+G F V + ++ + A K ++ + R+F E + L
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 62
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
HPN+V L + LV++ + G + D+ + + + I +
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQ-ILESIA 118
Query: 150 YLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
Y H +++R+LK N+LL +G KL+DFGLA + H GT GY
Sbjct: 119 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 172
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+PE K + D+++ GV+L +L G
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 33 TKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV---EVLMLSLLH 89
+ N+ + LG+G F V + ++ + A K ++ + R+F E + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 63
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
HPN+V L + LV++ + G + D+ + + + I +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQ-ILESIA 119
Query: 150 YLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
Y H +++R+LK N+LL +G KL+DFGLA + H GT GY
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+PE K + D+++ GV+L +L G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 138 MKIAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAK----------- 186
+ I A +E+LH K +++RDLK SNI K+ DFGL
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 187 LGPV-GDNTHVSTRVMGTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEIL 234
L P+ TH +GT Y +PE + K D++S G++L E+L
Sbjct: 224 LTPMPAYATHXGQ--VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 33 TKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV---EVLMLSLLH 89
+ N+ + LG+G F V + ++ + A K ++ + R+F E + L
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQ 63
Query: 90 HPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLE 149
HPN+V L + LV++ + G + D+ + + + I +
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQ-ILESIA 119
Query: 150 YLHDKAKPPVIYRDLKCSNILLD---RGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGY 206
Y H +++R+LK N+LL +G KL+DFGLA + H GT GY
Sbjct: 120 YCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGY 173
Query: 207 CAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+PE K + D+++ GV+L +L G
Sbjct: 174 LSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 37/226 (16%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDR--NGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
L+G G +G V + Y + + VAIK++ R + + L E+ +L+ L+H ++V ++
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD 119
Query: 99 YCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAA---GAARGLEYLHDKA 155
D Y+ L + L + P+ + T + I G++Y+H
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKL--FRTPV-YLTELHIKTLLYNLLVGVKYVHSAG 176
Query: 156 KPPVIYRDLKCSNILLDRGYHPKLSDFGLAK-------------LGPVGDNTHVST---- 198
+++RDLK +N L+++ K+ DFGLA+ + P D+ ++ T
Sbjct: 177 ---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 199 -----RVMG---TYGYCAPEYAKTGQ-LTLKSDVYSFGVVLLEILS 235
++ G T Y APE + T DV+S G + E+L+
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDR---NGVQGNREFLVEVLMLSLLHHPN 92
+R +G G +G V VAIK+L R + + R + E+ +L + H N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHEN 85
Query: 93 LVNLIGYCA------DGDQRLLVYEYM--PLGSVEDHLHDLSPGKKPLDWNTRMKIAAGA 144
++ L+ D LV +M LG + H + L + +
Sbjct: 86 VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH--------EKLGEDRIQFLVYQM 137
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY 204
+GL Y+H +I+RDLK N+ ++ K+ DFGLA+ V TR
Sbjct: 138 LKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR----- 189
Query: 205 GYCAPEYAKTG-QLTLKSDVYSFGVVLLEILSGR 237
Y APE + T D++S G ++ E+++G+
Sbjct: 190 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 27 RELAAATKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLV------ 80
+E ++R L +G F ++ E N+ A+K+ +++ ++ R+F
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKII--LCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKI 81
Query: 81 -----------EVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSV---EDHLHDLS 126
E+ +++ + + + G + D+ ++YEYM S+ +++ L
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 127 PGKKPLDWNTRMK-IAAGAARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLA 185
+K I Y+H++ + +RD+K SNIL+D+ KLSDFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 186 KLGPVGDNTHVSTRVMGTYGYCAPEY--AKTGQLTLKSDVYSFGVVL 230
+ + D +R GTY + PE+ ++ K D++S G+ L
Sbjct: 200 EY--MVDKKIKGSR--GTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFL----VEVLMLSLLHHP 91
+ +SL+G+G FG+V K Y + VAIK ++ + FL +EV +L L++
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI-----IKNKKAFLNQAQIEVRLLELMNKH 91
Query: 92 N------LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL--SPGKKPLDWNTRMKIAAG 143
+ +V+L + + LV+E + +L+DL + + + N K A
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-----NLYDLLRNTNFRGVSLNLTRKFAQQ 146
Query: 144 AARGLEYLHDKAKP--PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
L +L A P +I+ DLK NILL +PK S + G + +
Sbjct: 147 MCTALLFL---ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXI 200
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+ Y +PE L D++S G +L+E+ +G
Sbjct: 201 QSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 235
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 39 ESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
E+ +G G +G V + A K++ + V+ F E+ ++ L HPN++ L
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 99 YCADGDQRLLVYEYMPLGSV-EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
D LV E G + E +H K+ + +I + Y H K
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCH---KL 125
Query: 158 PVIYRDLKCSNILL--DRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT 214
V +RDLK N L D P KL DFGLA G + T+V GT Y +P+ +
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKV-GTPYYVSPQVLE- 181
Query: 215 GQLTLKSDVYSFGVVLLEILSG 236
G + D +S GV++ +L G
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCG 203
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 30/215 (13%)
Query: 36 FRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFL----VEVLMLSLLHHP 91
+ +SL+G+G FG+V K Y + VAIK ++ + FL +EV +L L++
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI-----IKNKKAFLNQAQIEVRLLELMNKH 110
Query: 92 N------LVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDL--SPGKKPLDWNTRMKIAAG 143
+ +V+L + + LV+E + +L+DL + + + N K A
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-----NLYDLLRNTNFRGVSLNLTRKFAQQ 165
Query: 144 AARGLEYLHDKAKP--PVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVM 201
L +L A P +I+ DLK NILL +PK S + G + +
Sbjct: 166 MCTALLFL---ATPELSIIHCDLKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXI 219
Query: 202 GTYGYCAPEYAKTGQLTLKSDVYSFGVVLLEILSG 236
+ Y +PE L D++S G +L+E+ +G
Sbjct: 220 QSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 16/202 (7%)
Query: 39 ESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIG 98
E+ +G G +G V + A K++ + V+ F E+ ++ L HPN++ L
Sbjct: 31 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 99 YCADGDQRLLVYEYMPLGSV-EDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKP 157
D LV E G + E +H K+ + +I + Y H K
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCH---KL 142
Query: 158 PVIYRDLKCSNILL--DRGYHP-KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKT 214
V +RDLK N L D P KL DFGLA G + T+V GT Y +P+ +
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKV-GTPYYVSPQVLE- 198
Query: 215 GQLTLKSDVYSFGVVLLEILSG 236
G + D +S GV++ +L G
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCG 220
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 14/198 (7%)
Query: 42 LGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGYCA 101
+G G FG + N+ VA+K ++R G + E++ L HPN+V
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIER-GEKIAANVKREIINHRSLRHPNIVRFKEVIL 85
Query: 102 DGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPVIY 161
+V EY G + + + + G+ D R G+ Y H V +
Sbjct: 86 TPTHLAIVMEYASGGELFERI--CNAGRFSED-EARF-FFQQLISGVSYCHAMQ---VCH 138
Query: 162 RDLKCSNILLDRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQLTL 219
RDLK N LLD P K+ DFG +K V + ST +GT Y APE +
Sbjct: 139 RDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLKKEYDG 195
Query: 220 K-SDVYSFGVVLLEILSG 236
K +DV+S GV L +L G
Sbjct: 196 KVADVWSCGVTLYVMLVG 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 17/186 (9%)
Query: 33 TKNFRSESLLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGN--------REFLVEVLM 84
++ + + S LG G FG V+ + N++V +K + + V + + +E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 85 LSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGA 144
LS + H N++ ++ + LV E G D P LD I
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQL 139
Query: 145 ARGLEYLHDKAKPPVIYRDLKCSNILLDRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTY 204
+ YL K +I+RD+K NI++ + KL DFG A G + GT
Sbjct: 140 VSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTI 193
Query: 205 GYCAPE 210
YCAPE
Sbjct: 194 EYCAPE 199
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 88/200 (44%), Gaps = 18/200 (9%)
Query: 42 LGEGGFG--RVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVLMLSLLHHPNLVNLIGY 99
+G G FG R+ + L + VA+K ++R G + E++ L HPN+V
Sbjct: 28 IGSGNFGVARLMRDKL--TKELVAVKYIER-GAAIDENVQREIINHRSLRHPNIVRFKEV 84
Query: 100 CADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDKAKPPV 159
++ EY G + + + + G+ D R + G+ Y H +
Sbjct: 85 ILTPTHLAIIMEYASGGELYERI--CNAGRFSED-EARFFFQQLLS-GVSYCHSMQ---I 137
Query: 160 IYRDLKCSNILLDRGYHP--KLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAKTGQL 217
+RDLK N LLD P K+ DFG +K V + ST +GT Y APE +
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSK-SSVLHSQPKST--VGTPAYIAPEVLLRQEY 194
Query: 218 TLK-SDVYSFGVVLLEILSG 236
K +DV+S GV L +L G
Sbjct: 195 DGKIADVWSCGVTLYVMLVG 214
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 41 LLGEGGFGRVYKGYLESINQDVAIKQLDRNGVQGNREFLVEVL-----MLSLLHHPNLVN 95
++G+G F V + Q A+K +D + E L + +L HP++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 96 LI-GYCADGDQRLLVYEYMPLGSVEDHLHDLSPGKKPLDWNTRMKIAAGAARGLEYLHDK 154
L+ Y +DG +V+E+M + + + L Y HD
Sbjct: 93 LLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 155 AKPPVIYRDLKCSNILL---DRGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEY 211
+I+RD+K +LL + KL FG+A +G++ V+ +GT + APE
Sbjct: 152 N---IIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLVAGGRVGTPHFMAPEV 206
Query: 212 AKTGQLTLKSDVYSFGVVLLEILSG 236
K DV+ GV+L +LSG
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSG 231
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,066,962
Number of Sequences: 62578
Number of extensions: 465571
Number of successful extensions: 3958
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 980
Number of HSP's gapped (non-prelim): 1139
length of query: 361
length of database: 14,973,337
effective HSP length: 100
effective length of query: 261
effective length of database: 8,715,537
effective search space: 2274755157
effective search space used: 2274755157
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)